BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013519
(441 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 182/324 (56%), Gaps = 17/324 (5%)
Query: 86 LKMFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDS 145
LK F+L++L+ A+ NF +LG GGFG+V+KG + TL
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQG------- 77
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF-RKGSAEP 204
G ++Q EV+ + H NL++L G+C + LLVY YM GS+ + L R S P
Sbjct: 78 --GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 135
Query: 205 LPWNTRLKIAIDAAKDLTFLHS-SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPID 263
L W R +IA+ +A+ L +LH + +I+RD KA+NILLD + A + DFGLAKL
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 195
Query: 264 GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEH-- 321
+ HV + GT G+ APEY++TG K+DV+G+GV+LLE++TG RA D R + +
Sbjct: 196 -DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 254
Query: 322 VLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLET 381
+L+D+ + L +K +L+ ++D L+ Y + Q+ + C ++ P RP M EV+
Sbjct: 255 MLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 382 LQNISVIEI--EPKKKAKARGNYN 403
L+ + E E +K+ R ++N
Sbjct: 314 LEGDGLAERWEEWQKEEMFRQDFN 337
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 169/302 (55%), Gaps = 15/302 (4%)
Query: 86 LKMFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDS 145
LK F+L++L+ A+ NF +LG GGFG+V+KG + L
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQG------- 69
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF-RKGSAEP 204
G ++Q EV+ + H NL++L G+C + LLVY YM GS+ + L R S P
Sbjct: 70 --GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 127
Query: 205 LPWNTRLKIAIDAAKDLTFLHS-SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPID 263
L W R +IA+ +A+ L +LH + +I+RD KA+NILLD + A + DFGLAKL
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187
Query: 264 GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEH-- 321
+ HV + G G+ APEY++TG K+DV+G+GV+LLE++TG RA D R + +
Sbjct: 188 -DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 322 VLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLET 381
+L+D+ + L +K +L+ ++D L+ Y + Q+ + C ++ P RP M EV+
Sbjct: 247 MLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 382 LQ 383
L+
Sbjct: 306 LE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 181/326 (55%), Gaps = 25/326 (7%)
Query: 67 GDGGDKNMPSSGEIVTPNYLKMFT-----LQDLRAATKNFRPDTMLGEGGFGRVFKGWV- 120
G K S + ++ +YL F L DL AT NF ++G G FG+V+KG +
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61
Query: 121 DHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQF 180
D +A P+S QG+ E++ E++ L HP+LV LIG+C E +
Sbjct: 62 DGAKVA-----------LKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110
Query: 181 LLVYEYMQKGSLENHLFRKGSAEP---LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFK 237
+L+Y+YM+ G+L+ HL+ GS P + W RL+I I AA+ L +LH+ +++I+RD K
Sbjct: 111 ILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVK 166
Query: 238 ASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYG 297
+ NILLD ++ K++DFG++K G G +H+ + GT GY PEY G L KSDVY
Sbjct: 167 SINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYS 226
Query: 298 FGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLA 357
FGVVL E+L A+ + P L ++A S + +L++I+DP L ++ +
Sbjct: 227 FGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKF 285
Query: 358 GQIIIKCLEAEPKNRPSMEEVLETLQ 383
G +KCL ++RPSM +VL L+
Sbjct: 286 GDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 180/326 (55%), Gaps = 25/326 (7%)
Query: 67 GDGGDKNMPSSGEIVTPNYLKMFT-----LQDLRAATKNFRPDTMLGEGGFGRVFKGWV- 120
G K S + ++ +YL F L DL AT NF ++G G FG+V+KG +
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61
Query: 121 DHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQF 180
D +A P+S QG+ E++ E++ L HP+LV LIG+C E +
Sbjct: 62 DGAKVA-----------LKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110
Query: 181 LLVYEYMQKGSLENHLFRKGSAEP---LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFK 237
+L+Y+YM+ G+L+ HL+ GS P + W RL+I I AA+ L +LH+ +++I+RD K
Sbjct: 111 ILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVK 166
Query: 238 ASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYG 297
+ NILLD ++ K++DFG++K G +H+ + GT GY PEY G L KSDVY
Sbjct: 167 SINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYS 226
Query: 298 FGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLA 357
FGVVL E+L A+ + P L ++A S + +L++I+DP L ++ +
Sbjct: 227 FGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKF 285
Query: 358 GQIIIKCLEAEPKNRPSMEEVLETLQ 383
G +KCL ++RPSM +VL L+
Sbjct: 286 GDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 165/304 (54%), Gaps = 19/304 (6%)
Query: 89 FTLQDLRAATKNF--RPDTM----LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSN 142
F+ +L+ T NF RP ++ +GEGGFG V+KG+V++ T+A
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 143 PDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA 202
+++ E+K + K H NLV+L+G+ + LVY YM GSL + L
Sbjct: 75 -------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
PL W+ R KIA AA + FLH E I+RD K++NILLD ++ AK+SDFGLA+
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 263 DGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
+ + +RI+GT Y APE + G + KSD+Y FGVVLLE++TGL A+D +R +
Sbjct: 186 FAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QL 242
Query: 323 LVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETL 382
L+D +++ ++ +D ++ + + + +CL + RP +++V + L
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYS-VASQCLHEKKNKRPDIKKVQQLL 301
Query: 383 QNIS 386
Q ++
Sbjct: 302 QEMT 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 164/304 (53%), Gaps = 19/304 (6%)
Query: 89 FTLQDLRAATKNF--RPDTM----LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSN 142
F+ +L+ T NF RP ++ +GEGGFG V+KG+V++ T+A
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 143 PDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA 202
+++ E+K + K H NLV+L+G+ + LVY YM GSL + L
Sbjct: 75 -------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
PL W+ R KIA AA + FLH E I+RD K++NILLD ++ AK+SDFGLA+
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 263 DGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
+ + RI+GT Y APE + G + KSD+Y FGVVLLE++TGL A+D +R +
Sbjct: 186 FAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QL 242
Query: 323 LVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETL 382
L+D +++ ++ +D ++ + + + +CL + RP +++V + L
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYS-VASQCLHEKKNKRPDIKKVQQLL 301
Query: 383 QNIS 386
Q ++
Sbjct: 302 QEMT 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 163/304 (53%), Gaps = 19/304 (6%)
Query: 89 FTLQDLRAATKNF--RPDTM----LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSN 142
F+ +L+ T NF RP ++ +GEGGFG V+KG+V++ T+A
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 143 PDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA 202
+++ E+K + K H NLV+L+G+ + LVY YM GSL + L
Sbjct: 69 -------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
PL W+ R KIA AA + FLH E I+RD K++NILLD ++ AK+SDFGLA+
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 263 DGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
+ RI+GT Y APE + G + KSD+Y FGVVLLE++TGL A+D +R +
Sbjct: 180 FAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QL 236
Query: 323 LVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETL 382
L+D +++ ++ +D ++ + + + +CL + RP +++V + L
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYS-VASQCLHEKKNKRPDIKKVQQLL 295
Query: 383 QNIS 386
Q ++
Sbjct: 296 QEMT 299
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 129/234 (55%), Gaps = 16/234 (6%)
Query: 89 FTLQDLRAATKNF--RPDTM----LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSN 142
F+ +L+ T NF RP ++ GEGGFG V+KG+V++ T+A
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 143 PDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA 202
+++ E+K K H NLV+L+G+ + LVY Y GSL + L
Sbjct: 66 -------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT 118
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
PL W+ R KIA AA + FLH E I+RD K++NILLD ++ AK+SDFGLA+
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 263 DGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR 316
+RI+GT Y APE + G + KSD+Y FGVVLLE++TGL A+D +R
Sbjct: 177 FAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 20/249 (8%)
Query: 149 LREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWN 208
+ E+ EV + + HPN+V +G + +V EY+ +GSL L + G+ E L
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
RL +A D AK + +LH+ +++RD K+ N+L+D Y K+ DFGL++L + +
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFL 194
Query: 269 TTRI-MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
++ GT + APE + KSDVY FGV+L E+ T + P+ V F
Sbjct: 195 XSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF- 253
Query: 328 RPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISV 387
+ K++ PR P A++ G C EP RPS +++ L+ +
Sbjct: 254 --------KCKRLEIPR--NLNPQVAAIIEG-----CWTNEPWKRPSFATIMDLLRPLIK 298
Query: 388 IEIEPKKKA 396
+ P ++
Sbjct: 299 SAVPPPNRS 307
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 20/249 (8%)
Query: 149 LREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWN 208
+ E+ EV + + HPN+V +G + +V EY+ +GSL L + G+ E L
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
RL +A D AK + +LH+ +++R+ K+ N+L+D Y K+ DFGL++L ++ +
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFL 194
Query: 269 TTR-IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
+++ GT + APE + KSDVY FGV+L E+ T + P+ V F
Sbjct: 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF- 253
Query: 328 RPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISV 387
+ K++ PR P A++ G C EP RPS +++ L+ +
Sbjct: 254 --------KCKRLEIPR--NLNPQVAAIIEG-----CWTNEPWKRPSFATIMDLLRPLIK 298
Query: 388 IEIEPKKKA 396
+ P ++
Sbjct: 299 SAVPPPNRS 307
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 43/292 (14%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
K + ++G G FG V K K +A +S + + E++
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDVA-------------IKQIESESERKAFIVELRQ 55
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR---LKIAI 215
L + +HPN+VKL G C LV EY + GSL N L AEPLP+ T + +
Sbjct: 56 LSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLH---GAEPLPYYTAAHAMSWCL 110
Query: 216 DAAKDLTFLHSSE-KSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
++ + +LHS + K++I+RD K N+LL G K+ DFG A D +H+T
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNN-K 165
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
G+ + APE + K DV+ +G++L E++T + D G + +A + T
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTR 223
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+K + P ++ +C +P RPSMEE+++ + ++
Sbjct: 224 PPLIKNLPKP-------------IESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 34/281 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G G FG V G W++ +A S D I+ E + + K SHP
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-------EAEVMMKLSHP 62
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
LV+L G C E LV+E+M+ G L ++L + T L + +D + + +L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
E SVI+RD A N L+ + K+SDFG+ + +D +T +A+PE +
Sbjct: 121 --EASVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 286 TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRL 345
KSDV+ FGV++ E+ + + NR + E V ++ RL K PRL
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------EDISTGFRLYK---PRL 228
Query: 346 EEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+ QI+ C + P++RP+ +L L I+
Sbjct: 229 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAAIA 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 43/292 (14%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
K + ++G G FG V K K +A +S + + E++
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDVA-------------IKQIESESERKAFIVELRQ 54
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR---LKIAI 215
L + +HPN+VKL G C LV EY + GSL N L AEPLP+ T + +
Sbjct: 55 LSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLH---GAEPLPYYTAAHAMSWCL 109
Query: 216 DAAKDLTFLHSSE-KSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
++ + +LHS + K++I+RD K N+LL G K+ DFG A D +H+T
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNN-K 164
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
G+ + APE + K DV+ +G++L E++T + D G + +A + T
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTR 222
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+K + P ++ +C +P RPSMEE+++ + ++
Sbjct: 223 PPLIKNLPKP-------------IESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 34/287 (11%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G+GGFG V KG V K++ + I+ +E+Q EV + +HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE---GETEMIEKFQEFQREVFIMSNLNHP 83
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
N+VKL G + +V E++ G L + L K A P+ W+ +L++ +D A + ++
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 226 SSEKSVIYRDFKASNILL-----DGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
+ +++RD ++ NI L + AK++DFGL++ + H + ++G + + A
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMA 194
Query: 281 PEYV-ATGHLYV-KSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
PE + A Y K+D Y F ++L +LTG D G+ ++ R +
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIR---------E 244
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ + P + E P + +I C +PK RP +++ L +
Sbjct: 245 EGLRPTIPEDCPPR----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 127/281 (45%), Gaps = 34/281 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G G FG V G W++ +A S D I+ +AEV + K SHP
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-----EAEV--MMKLSHP 62
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
LV+L G C E LV+E+M+ G L ++L + T L + +D + + +L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
E VI+RD A N L+ + K+SDFG+ + +D +T +A+PE +
Sbjct: 121 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 286 TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRL 345
KSDV+ FGV++ E+ + + NR + E V ++ RL K PRL
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------EDISTGFRLYK---PRL 228
Query: 346 EEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+ QI+ C + P++RP+ +L L I+
Sbjct: 229 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIA 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 127/281 (45%), Gaps = 34/281 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G G FG V G W++ +A S D I+ +AEV + K SHP
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVA-----IKTIKEGSMSEDDFIE-----EAEV--MMKLSHP 82
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
LV+L G C E LV+E+M+ G L ++L + T L + +D + + +L
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 140
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
E VI+RD A N L+ + K+SDFG+ + +D +T +A+PE +
Sbjct: 141 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS 197
Query: 286 TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRL 345
KSDV+ FGV++ E+ + + NR + E V ++ RL K PRL
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------EDISTGFRLYK---PRL 248
Query: 346 EEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+ QI+ C + P++RP+ +L L I+
Sbjct: 249 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIA 282
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 127/281 (45%), Gaps = 34/281 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G G FG V G W++ +A S D I+ +AEV + K SHP
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-----EAEV--MMKLSHP 60
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
LV+L G C E LV+E+M+ G L ++L + T L + +D + + +L
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
E VI+RD A N L+ + K+SDFG+ + +D +T +A+PE +
Sbjct: 119 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 286 TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRL 345
KSDV+ FGV++ E+ + + NR + E V ++ RL K PRL
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------EDISTGFRLYK---PRL 226
Query: 346 EEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+ QI+ C + P++RP+ +L L I+
Sbjct: 227 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 34/281 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G G FG V G W++ +A S D I+ E + + K SHP
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-------EAEVMMKLSHP 65
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
LV+L G C E LV+E+M+ G L ++L + T L + +D + + +L
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 123
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
E VI+RD A N L+ + K+SDFG+ + +D +T +A+PE +
Sbjct: 124 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS 180
Query: 286 TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRL 345
KSDV+ FGV++ E+ + + NR + E V ++ RL K PRL
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------EDISTGFRLYK---PRL 231
Query: 346 EEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+ QI+ C P++RP+ +L L I+
Sbjct: 232 ASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 48/303 (15%)
Query: 101 FRPDTM-----LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAE 155
FRP + LG+G FG+ K V H+ + R + E
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIK--VTHRETGEVMVMKELIRFDEETQ-------RTFLKE 57
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAI 215
VK + HPN++K IG ++D++ + EY++ G+L + K PW+ R+ A
Sbjct: 58 VKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAK 115
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR---- 271
D A + +LHS ++I+RD + N L+ + N ++DFGLA+L + R
Sbjct: 116 DIASGMAYLHSM--NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173
Query: 272 --------IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVL 323
++G + APE + K DV+ FG+VL E++ + A P
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT---- 229
Query: 324 VDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPS---MEEVLE 380
+DF L + L + P + I ++C + +P+ RPS +E LE
Sbjct: 230 MDFG---LNVRGFLDRYCPPNCPPSF--------FPITVRCCDLDPEKRPSFVKLEHWLE 278
Query: 381 TLQ 383
TL+
Sbjct: 279 TLR 281
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 34/287 (11%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G+GGFG V KG V K++ + I+ +E+Q EV + +HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE---GETEMIEKFQEFQREVFIMSNLNHP 83
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
N+VKL G + +V E++ G L + L K A P+ W+ +L++ +D A + ++
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 226 SSEKSVIYRDFKASNILL-----DGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
+ +++RD ++ NI L + AK++DFG ++ + H + ++G + + A
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMA 194
Query: 281 PEYV-ATGHLYV-KSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
PE + A Y K+D Y F ++L +LTG D G+ ++ R +
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIR---------E 244
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ + P + E P + +I C +PK RP +++ L +
Sbjct: 245 EGLRPTIPEDCPPR----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 34/287 (11%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G+GGFG V KG V K++ + I+ +E+Q EV + +HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE---GETEMIEKFQEFQREVFIMSNLNHP 83
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
N+VKL G + +V E++ G L + L K A P+ W+ +L++ +D A + ++
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 226 SSEKSVIYRDFKASNILL-----DGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
+ +++RD ++ NI L + AK++DF L++ + H + ++G + + A
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMA 194
Query: 281 PEYV-ATGHLYV-KSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
PE + A Y K+D Y F ++L +LTG D G+ ++ R +
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIR---------E 244
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ + P + E P + +I C +PK RP +++ L +
Sbjct: 245 EGLRPTIPEDCPPR----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 54/298 (18%)
Query: 104 DTMLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKF 162
+ ++G GGFG+V++ W+ + + D Q + + E K
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEV--------AVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
HPN++ L G C ++ LV E+ + G L L S + +P + + A+ A+ +
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMN 119
Query: 223 FLH-SSEKSVIYRDFKASNILL-----DGSYN---AKLSDFGLAKLGPIDGNSHVTTRI- 272
+LH + +I+RD K+SNIL+ +G + K++DFGLA+ H TT++
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMS 173
Query: 273 -MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG---LRALDTNRPSGEHVLVDFAR 328
G Y + APE + SDV+ +GV+L E+LTG R +D + + A
Sbjct: 174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL 233
Query: 329 P-SLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
P T K+M+ C +P +RPS +L+ L I
Sbjct: 234 PIPSTCPEPFAKLME--------------------DCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 123/281 (43%), Gaps = 34/281 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G G FG V G W++ +A S D I+ E + + K SHP
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-------EAEVMMKLSHP 63
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
LV+L G C E LV E+M+ G L ++L + T L + +D + + +L
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 121
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
E VI+RD A N L+ + K+SDFG+ + +D +T +A+PE +
Sbjct: 122 --EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS 178
Query: 286 TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRL 345
KSDV+ FGV++ E+ + + NR + E V ++ RL K PRL
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV------EDISTGFRLYK---PRL 229
Query: 346 EEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+ QI+ C P++RP+ +L L I+
Sbjct: 230 ASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 46/291 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT P +Q + EV L
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT--------------PQQLQAFKN---EVGVL 62
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY Q +V ++ + SL +HL S + IA A+
Sbjct: 63 RKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTAR 119
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA + SH ++ G+ +
Sbjct: 120 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 280 APEYVA---TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT-DKR 335
APE + + +SDVY FG+VL E++TG +N + + ++ R SL+ D
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIEMVGRGSLSPDLS 236
Query: 336 RLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+++ R++ +++ +CL+ + RPS +L ++ ++
Sbjct: 237 KVRSNCPKRMK------------RLMAECLKKKRDERPSFPRILAEIEELA 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 46/291 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT P +Q + EV L
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT--------------PQQLQAFKN---EVGVL 74
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY Q +V ++ + SL +HL S + IA A+
Sbjct: 75 RKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTAR 131
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA SH ++ G+ +
Sbjct: 132 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 280 APEYVA---TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT-DKR 335
APE + + +SDVY FG+VL E++TG +N + + ++ R SL+ D
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIEMVGRGSLSPDLS 248
Query: 336 RLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+++ R++ +++ +CL+ + RPS +L ++ ++
Sbjct: 249 KVRSNCPKRMK------------RLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 46/291 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT P +Q + EV L
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT--------------PQQLQAFKN---EVGVL 74
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY Q +V ++ + SL +HL S + IA A+
Sbjct: 75 RKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTAR 131
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA SH ++ G+ +
Sbjct: 132 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 280 APEYVA---TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT-DKR 335
APE + + +SDVY FG+VL E++TG +N + + ++ R SL+ D
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIEMVGRGSLSPDLS 248
Query: 336 RLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+++ R++ +++ +CL+ + RPS +L ++ ++
Sbjct: 249 KVRSNCPKRMK------------RLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 43/303 (14%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G FG V++G W + D+++ + E+ E + + HP
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 67
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESL 182
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ PS + L++ D
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDY 227
Query: 344 RLE--EQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKKAKA 398
R+E E P K +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 228 RMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGK 283
Query: 399 RGN 401
RG
Sbjct: 284 RGE 286
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 100
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 158
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGLA++ D + TTR +
Sbjct: 159 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW 216
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 270
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 271 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 125/283 (44%), Gaps = 17/283 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG FG+V D T T P G W+ E+ L H +
Sbjct: 22 LGEGHFGKVSLYCYD-PTNDGTGEMVAVKALKADCGPQHRSG---WKQEIDILRTLYHEH 77
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
++K G C + ++ LV EY+ GSL ++L R + L A + + +L
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYL 133
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG--TYGYAAPE 282
HS + I+R+ A N+LLD K+ DFGLAK P +G+ + R G + APE
Sbjct: 134 HS--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPE 190
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ Y SDV+ FGV L E+LT + + P+ L+ A+ +T RL ++++
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMT-VLRLTELLE 248
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
P K ++ C E E RP+ E ++ L+ +
Sbjct: 249 RGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 43/303 (14%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 67
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF--PIKWTAPESL 182
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ PS + L++ D
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDY 227
Query: 344 RLE--EQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKKAKA 398
R+E E P K +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 228 RMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGK 283
Query: 399 RGN 401
RG
Sbjct: 284 RGE 286
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 100
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 158
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 159 GMKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 270
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 271 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 100
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 158
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 159 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 270
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 271 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 44 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 98
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 156
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 157 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 214
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 215 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 268
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 269 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 100
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 158
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 159 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 270
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 271 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 100
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 158
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 159 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 270
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 271 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 100
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 158
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 159 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 270
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 271 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 125/283 (44%), Gaps = 17/283 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG FG+V D T T P G W+ E+ L H +
Sbjct: 22 LGEGHFGKVSLYCYD-PTNDGTGEMVAVKALKADCGPQHRSG---WKQEIDILRTLYHEH 77
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
++K G C + ++ LV EY+ GSL ++L R + L A + + +L
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYL 133
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG--TYGYAAPE 282
H+ + I+R+ A N+LLD K+ DFGLAK P +G+ + R G + APE
Sbjct: 134 HA--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPE 190
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ Y SDV+ FGV L E+LT + + P+ L+ A+ +T RL ++++
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMT-VLRLTELLE 248
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
P K ++ C E E RP+ E ++ L+ +
Sbjct: 249 RGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 100
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 158
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL ++ D + TTR +
Sbjct: 159 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW 216
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 270
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 271 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 34 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 88
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 146
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 147 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 204
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 205 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 258
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 259 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 17 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 71
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V EYM+ GSL++ L RK A+ + + A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 129
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 130 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 241
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 242 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 31 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 79
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 80 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 136
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N + T R + + APE +
Sbjct: 137 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEY-TAREGAKFPIKWTAPEAI 192
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ + AE + + H
Sbjct: 16 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDA------FLAEANLMKQLQHQR 64
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 65 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 121
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N + T R + + APE +
Sbjct: 122 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEY-TAREGAKFPIKWTAPEAI 177
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 26 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 74
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 75 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 131
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N + T R + + APE +
Sbjct: 132 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEY-TAREGAKFPIKWTAPEAI 187
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 27 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 75
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 76 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 132
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N + T R + + APE +
Sbjct: 133 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEY-TAREGAKFPIKWTAPEAI 188
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 21 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 69
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N + T R + + APE +
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEY-TAREGAKFPIKWTAPEAI 182
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 124/284 (43%), Gaps = 19/284 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG FG+V D T T + P G W+ E+ L H +
Sbjct: 39 LGEGHFGKVSLYCYD-PTNDGTGEMVAVKALKADAGPQHRSG---WKQEIDILRTLYHEH 94
Query: 167 LVKLIGYCWEDR---QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
++K G C ED LV EY+ GSL ++L R + L A + + +
Sbjct: 95 IIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAY 149
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG--TYGYAAP 281
LH+ + I+RD A N+LLD K+ DFGLAK P +G+ R G + AP
Sbjct: 150 LHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEXYRVREDGDSPVFWYAP 206
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIM 341
E + Y SDV+ FGV L E+LT + + P+ L+ A+ +T RL +++
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMT-VLRLTELL 264
Query: 342 DPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ P K ++ C E E RP+ E ++ L+ +
Sbjct: 265 ERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 40/284 (14%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 67
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 68 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESL 182
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ PS + L++ D
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDY 227
Query: 344 RLE--EQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
R+E E P K +++ C + P +RPS E+ + + +
Sbjct: 228 RMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 27 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 75
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 76 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 132
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N T R + + APE +
Sbjct: 133 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEX-TAREGAKFPIKWTAPEAI 188
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 29 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 77
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 78 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 134
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N T R + + APE +
Sbjct: 135 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDN-EXTAREGAKFPIKWTAPEAI 190
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 191 NYGTFTIKSDVWSFGILLTEIVT 213
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 39/301 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 74
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 189
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 232
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKKAKARG 400
+ P +++ C + P +RPS E+ ET+ S I E +K+ RG
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRG 292
Query: 401 N 401
Sbjct: 293 T 293
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 100
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V E M+ GSL++ L RK A+ + + A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 158
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 159 GMKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 270
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 271 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 30 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 78
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 79 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 135
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N T R + + APE +
Sbjct: 136 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEX-TAREGAKFPIKWTAPEAI 191
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 192 NYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 21 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 69
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N T R + + APE +
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEX-TAREGAKFPIKWTAPEAI 182
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 139/301 (46%), Gaps = 39/301 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE----------DTME-VEEFLKEAAVMKEIKHP 276
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+R+ A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 336 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 391
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 392 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 434
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKKAKARG 400
+ P +++ C + P +RPS E+ ET+ S I E +K+ RG
Sbjct: 435 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRG 494
Query: 401 N 401
Sbjct: 495 T 495
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 39/301 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 69
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 184
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 227
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKKAKARG 400
+ P +++ C + P +RPS E+ ET+ S I E +K+ RG
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRG 287
Query: 401 N 401
Sbjct: 288 T 288
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 33/292 (11%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSI-QGLREWQAEVKFLGKFSHP 165
LGEG FG+V D P P+S + + + E++ L H
Sbjct: 29 LGEGHFGKVELCRYD-----PEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 166 NLVKLIGYCWED--RQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
N+VK G C ED L+ E++ GSL+ +L + + L +LK A+ K + +
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDY 141
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT--RIMGTYGYAAP 281
L S + ++RD A N+L++ + K+ DFGL K D R + Y AP
Sbjct: 142 LGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-AP 198
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRA--------LDTNRPSGEHVLVDFARPSLTD 333
E + Y+ SDV+ FGV L E+LT + L P+ + V +L +
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE 258
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+RL P ++ Q++ KC E +P NR S + ++E + +
Sbjct: 259 GKRLP--CPPNCPDE--------VYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 23 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 71
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 72 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 128
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N T R + + APE +
Sbjct: 129 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEX-TAREGAKFPIKWTAPEAI 184
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 185 NYGTFTIKSDVWSFGILLTEIVT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 39/301 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 69
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 184
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 227
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKKAKARG 400
+ P +++ C + P +RPS E+ ET+ S I E +K+ RG
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRG 287
Query: 401 N 401
Sbjct: 288 T 288
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 33/292 (11%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSI-QGLREWQAEVKFLGKFSHP 165
LGEG FG+V D P P+S + + + E++ L H
Sbjct: 17 LGEGHFGKVELCRYD-----PEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 166 NLVKLIGYCWED--RQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
N+VK G C ED L+ E++ GSL+ +L + + L +LK A+ K + +
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDY 129
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT--RIMGTYGYAAP 281
L S + ++RD A N+L++ + K+ DFGL K D R + Y AP
Sbjct: 130 LGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-AP 186
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRA--------LDTNRPSGEHVLVDFARPSLTD 333
E + Y+ SDV+ FGV L E+LT + L P+ + V +L +
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE 246
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+RL P ++ Q++ KC E +P NR S + ++E + +
Sbjct: 247 GKRLP--CPPNCPDE--------VYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 22 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 70
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 71 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 127
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N T R + + APE +
Sbjct: 128 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEX-TAREGAKFPIKWTAPEAI 183
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 184 NYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 100
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V E M+ GSL++ L RK A+ + + A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 158
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 159 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 270
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 271 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ AE + + H
Sbjct: 21 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFL------AEANLMKQLQHQR 69
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+RD +A+NIL+ + + K++DFGLA+L I+ N T R + + APE +
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEX-TAREGAKFPIKWTAPEAI 182
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ G+ + T +PD+ + AE + + H
Sbjct: 17 LGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDA------FLAEANLMKQLQHQR 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
LV+L ++ +++ EYM+ GSL + L + S L N L +A A+ + F+
Sbjct: 66 LVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE- 122
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEYV 284
E++ I+R+ +A+NIL+ + + K++DFGLA+L I+ N + T R + + APE +
Sbjct: 123 -ERNYIHRNLRAANILVSDTLSCKIADFGLARL--IEDNEY-TAREGAKFPIKWTAPEAI 178
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
G +KSDV+ FG++L E++T
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVT 201
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
L +HP ++++ G + +Q ++ +Y++ G L + L RK P P A +
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNP--VAKFYAAEVC 116
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LHS K +IYRD K NILLD + + K++DFG AK P VT + GT Y
Sbjct: 117 LALEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDY 169
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
APE V+T D + FG+++ EML G
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 21/237 (8%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
R++ E +G+F HPN++ L G + + ++V EYM+ GSL+ L + +
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLV 127
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
+ I A + S+ ++RD A NIL++ + K+SDFGL+++ D + T
Sbjct: 128 GMLRGISAGMK----YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 270 TRIMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
TR + APE +A SDV+ +G+V+ E+++ RP E D +
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSY-----GERPYWEMTNQDVIK 238
Query: 329 PSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
++ + RL MD AL Q+++ C + E +RP +E++ L +
Sbjct: 239 -AVEEGYRLPSPMD--------CPAALY--QLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 118/293 (40%), Gaps = 30/293 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N + LG G FG+V + ++ D + L +E+K +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIM 103
Query: 160 GKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE-------PLPWNTRL 211
H N+V L+G C L++ EY G L N L RK A+ PL L
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 163
Query: 212 KIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+ A+ + FL S K+ I+RD A N+LL + AK+ DFGLA+ D N V
Sbjct: 164 HFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPS 330
+ APE + V+SDV+ +G++L E+ + GL P
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY----------------PG 265
Query: 331 LTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
+ + K++ + P I+ C EP +RP+ +++ LQ
Sbjct: 266 ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 118/292 (40%), Gaps = 28/292 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N + LG G FG+V + ++ D + L +E+K +
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIM 95
Query: 160 GKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE-------PLPWNTRL 211
H N+V L+G C L++ EY G L N L RK A+ PL L
Sbjct: 96 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 155
Query: 212 KIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+ A+ + FL S K+ I+RD A N+LL + AK+ DFGLA+ D N V
Sbjct: 156 HFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
+ APE + V+SDV+ +G++L E+ + L N P +
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLN-----------PYPGI 258
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
+ K++ + P I+ C EP +RP+ +++ LQ
Sbjct: 259 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT Q L+ ++ EV L
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTP-----------------QQLQAFKNEVGVL 86
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY + Q +V ++ + SL +HL + + + IA A+
Sbjct: 87 RKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 143
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA + SH ++ G+ +
Sbjct: 144 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT Q L+ ++ EV L
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTP-----------------QQLQAFKNEVGVL 85
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY + Q +V ++ + SL +HL + + + IA A+
Sbjct: 86 RKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 142
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA + SH ++ G+ +
Sbjct: 143 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 201 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 26/287 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N D ++G G FG V G + P+ Q R++ E +
Sbjct: 17 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIM 71
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
G+F HPN+++L G + + ++V E M+ GSL++ L RK A+ + + A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQ-FTVIQLVGMLRGIAS 129
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGY 278
+ +L S+ ++RD A NIL++ + K+SDFGL+++ D + TTR +
Sbjct: 130 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
+PE +A SDV+ +G+VL E+++ RP E D + ++ + RL
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIK-AVDEGYRLP 241
Query: 339 KIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
MD AL Q+++ C + + NRP E+++ L +
Sbjct: 242 PPMD--------CPAALY--QLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT P +Q + EV L
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT--------------PQQLQAFKN---EVGVL 63
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY Q +V ++ + SL +HL + + + IA A+
Sbjct: 64 RKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 120
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA + SH ++ G+ +
Sbjct: 121 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT P +Q + EV L
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT--------------PQQLQAFKN---EVGVL 60
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY Q +V ++ + SL +HL + + + IA A+
Sbjct: 61 RKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 117
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA + SH ++ G+ +
Sbjct: 118 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 176 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT Q L+ ++ EV L
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTP-----------------QQLQAFKNEVGVL 63
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY Q +V ++ + SL +HL + + + IA A+
Sbjct: 64 RKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 120
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA + SH ++ G+ +
Sbjct: 121 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT P +Q + EV L
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT--------------PQQLQAFKN---EVGVL 58
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY Q +V ++ + SL +HL + + + IA A+
Sbjct: 59 RKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 115
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA + SH ++ G+ +
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT P +Q + EV L
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT--------------PQQLQAFKN---EVGVL 58
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY Q +V ++ + SL +HL + + + IA A+
Sbjct: 59 RKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 115
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA + SH ++ G+ +
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 46/286 (16%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ + T P S+ + + AE + H
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM----------KPGSM-SVEAFLAEANVMKTLQHDK 244
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKDLTFLH 225
LVKL ++ +++ E+M KGSL + L +GS +PLP + + A+ + F+
Sbjct: 245 LVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE 301
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEY 283
+++ I+RD +A+NIL+ S K++DFGLA++ I+ N + T R + + APE
Sbjct: 302 --QRNYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEY-TAREGAKFPIKWTAPEA 356
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
+ G +KSDV+ FG++L+E++T R P +++ ++
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGR---------------IPYPGMSNPEVIRA---- 397
Query: 344 RLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
LE Y P I+++C + P+ RP+ E + L +
Sbjct: 398 -LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 39/300 (13%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 74
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 189
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 232
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKKAKARG 400
+ P +++ C + P +RPS E+ ET+ S I E +K+ +G
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKQG 292
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVKFLGKFSHP 165
LGEG FG+V D PT LR WQ E++ L H
Sbjct: 16 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 166 NLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRK--GSAEPLPWNTRLKIAIDAAKDL 221
++VK G C + ++ LV EY+ GSL ++L R G A+ L A + +
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ------LLLFAQQICEGM 124
Query: 222 TFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG--TYGYA 279
+LH+ + I+R A N+LLD K+ DFGLAK P +G+ + R G +
Sbjct: 125 AYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWY 181
Query: 280 APEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR-PSGEHV-LVDFARPSLTDKRRL 337
APE + Y SDV+ FGV L E+LT D+N+ P + L+ + +T RL
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELLT---YCDSNQSPHTKFTELIGHTQGQMT-VLRL 237
Query: 338 KKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++++ P + ++ C E E RP+ + ++ LQ
Sbjct: 238 TELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 127/287 (44%), Gaps = 27/287 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVKFLGKFSHP 165
LGEG FG+V D PT LR WQ E++ L H
Sbjct: 17 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 166 NLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRK--GSAEPLPWNTRLKIAIDAAKDL 221
++VK G C + ++ LV EY+ GSL ++L R G A+ L A + +
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ------LLLFAQQICEGM 125
Query: 222 TFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG--TYGYA 279
+LH+ + I+R A N+LLD K+ DFGLAK P +G+ + R G +
Sbjct: 126 AYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWY 182
Query: 280 APEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR-PSGEHV-LVDFARPSLTDKRRL 337
APE + Y SDV+ FGV L E+LT D+N+ P + L+ + +T RL
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYELLT---YCDSNQSPHTKFTELIGHTQGQMT-VLRL 238
Query: 338 KKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++++ P + ++ C E E RP+ + ++ LQ
Sbjct: 239 TELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 22/204 (10%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ + T P S+ + + AE + H
Sbjct: 23 LGAGQFGEVWMATYNKHT----------KVAVKTMKPGSM-SVEAFLAEANVMKTLQHDK 71
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKDLTFLH 225
LVKL ++ +++ E+M KGSL + L +GS +PLP + + A+ + F+
Sbjct: 72 LVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAPEY 283
+++ I+RD +A+NIL+ S K++DFGLA++ I+ N + T R + + APE
Sbjct: 129 --QRNYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEY-TAREGAKFPIKWTAPEA 183
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ G +KSDV+ FG++L+E++T
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIVT 207
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT Q L+ ++ EV L
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTP-----------------QQLQAFKNEVGVL 86
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY + Q +V ++ + SL +HL + + + IA A+
Sbjct: 87 RKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 143
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA SH ++ G+ +
Sbjct: 144 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 29/228 (12%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E++ L F HP+++KL F +V EY+ G L +++ + G E + RL
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME-ARRLFQQ 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
I +A D H V++RD K N+LLD NAK++DFGL+ + DG T+ G
Sbjct: 120 ILSAVDYCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTS--CG 172
Query: 275 TYGYAAPEYVATGHLYV--KSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
+ YAAPE V +G LY + D++ GV+L +L G D EHV P+L
Sbjct: 173 SPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-----EHV------PTLF 220
Query: 333 DKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K R P + +++ L+ +P R +++++ E
Sbjct: 221 KKIRGGVFYIPEYLNRS-------VATLLMHMLQVDPLKRATIKDIRE 261
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT P +Q + EV L
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT--------------PQQLQAFKN---EVGVL 78
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY + Q +V ++ + SL +HL + + + IA A+
Sbjct: 79 RKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 135
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA SH ++ G+ +
Sbjct: 136 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 194 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 105 TMLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
T +G G FG V+KG W H +A P+ Q R EV L K
Sbjct: 42 TRIGSGSFGTVYKGKW--HGDVA------VKILKVVDPTPEQFQAFRN---EVAVLRKTR 90
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
H N++ +GY +D +V ++ + SL HL + + + + IA A+ + +
Sbjct: 91 HVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDY 147
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LH+ K++I+RD K++NI L K+ DFGLA + S + G+ + APE
Sbjct: 148 LHA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV 205
Query: 284 VAT---GHLYVKSDVYGFGVVLLEMLTG 308
+ +SDVY +G+VL E++TG
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 81 VTPNYLKMFTLQDLRAATKNFRPDTMLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXX 139
V+PNY K + ++ K+ LG G +G V++G W +
Sbjct: 247 VSPNYDK-WEMERTDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKE------ 294
Query: 140 XSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK 199
D+++ + E+ E + + HPNLV+L+G C + F ++ E+M G+L ++L R+
Sbjct: 295 ----DTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RE 348
Query: 200 GSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL 259
+ + + L +A + + +L +K+ I+R+ A N L+ ++ K++DFGL++L
Sbjct: 349 CNRQEVNAVVLLYMATQISSAMEYL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRL 406
Query: 260 GPIDG-NSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRP 317
D +H + + APE +A +KSDV+ FGV+L E+ T G+
Sbjct: 407 MTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----- 459
Query: 318 SGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEE 377
P + D ++ ++++ + P +++ C + P +RPS E
Sbjct: 460 -----------PGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 507
Query: 378 V---LETLQNISVIEIEPKKK 395
+ ET+ S I E +K+
Sbjct: 508 IHQAFETMFQESSISDEVEKE 528
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 138/316 (43%), Gaps = 43/316 (13%)
Query: 84 NYLKMFTLQDLRAATKNF---------RPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXX 134
++ FT +D A + F + + ++G G FG V G + P
Sbjct: 5 TFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSG----RLKVPGKREICV 60
Query: 135 XXXXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLEN 194
+ Q R++ +E +G+F HPN++ L G + + +++ EYM+ GSL+
Sbjct: 61 AIKTLKAGYTDKQR-RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 195 HLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDF 254
L RK + + + + S+ S ++RD A NIL++ + K+SDF
Sbjct: 120 FL-RKNDGR---FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDF 175
Query: 255 GLAKLGPIDGNSHVTTRIMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
G++++ D + TTR + APE +A SDV+ +G+V+ E+++
Sbjct: 176 GMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------ 229
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEP 369
GE D ++++ +K I EE Y P+ + Q+++ C + E
Sbjct: 230 ----YGERPYWD-----MSNQDVIKAI-----EEGYRLPPPMDCPIALHQLMLDCWQKER 275
Query: 370 KNRPSMEEVLETLQNI 385
+RP +++ L +
Sbjct: 276 SDRPKFGQIVNMLDKL 291
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 69
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 184
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 227
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKK 395
+ P +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 81 VTPNYLKMFTLQDLRAATKNFRPDTMLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXX 139
V+PNY K + ++ K+ LG G +G V++G W +
Sbjct: 205 VSPNYDK-WEMERTDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKE------ 252
Query: 140 XSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK 199
D+++ + E+ E + + HPNLV+L+G C + F ++ E+M G+L ++L R+
Sbjct: 253 ----DTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RE 306
Query: 200 GSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL 259
+ + + L +A + + +L +K+ I+R+ A N L+ ++ K++DFGL++L
Sbjct: 307 CNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 364
Query: 260 GPIDG-NSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRP 317
D +H + + APE +A +KSDV+ FGV+L E+ T G+
Sbjct: 365 MTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----- 417
Query: 318 SGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEE 377
P + D ++ ++++ + P +++ C + P +RPS E
Sbjct: 418 -----------PGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 465
Query: 378 V---LETLQNISVIEIEPKKK 395
+ ET+ S I E +K+
Sbjct: 466 IHQAFETMFQESSISDEVEKE 486
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 69
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 184
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 227
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKK 395
+ P +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 58/287 (20%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG G FG V+ + T P S+ + + AE + H
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM----------KPGSM-SVEAFLAEANVMKTLQHDK 238
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKDLTFLH 225
LVKL ++ +++ E+M KGSL + L +GS +PLP + + A+ + F+
Sbjct: 239 LVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE 295
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG---PIDGNSHVTTRIMGTYGYAAPE 282
+++ I+RD +A+NIL+ S K++DFGLA++G PI + APE
Sbjct: 296 --QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK--------------WTAPE 339
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ G +KSDV+ FG++L+E++T R P +++ ++
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVTYGR---------------IPYPGMSNPEVIRA--- 381
Query: 343 PRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
LE Y P I+++C + P+ RP+ E + L +
Sbjct: 382 --LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Query: 149 LREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWN 208
+ E+ E + + HPNLV+L+G C + F +V EYM G+L ++L R+ + E +
Sbjct: 72 VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAV 130
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSH 267
L +A + + +L +K+ I+RD A N L+ ++ K++DFGL++L D +H
Sbjct: 131 VLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAH 188
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE +A +KSDV+ FGV+L E+ T
Sbjct: 189 AGAKF--PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+LGEG FG V +G + + S + + E+ +E + FSHP
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ----REIEEFLSEAACMKDFSHP 96
Query: 166 NLVKLIGYCWEDR-----QFLLVYEYMQKGSLENH-LFRKGSAEP--LPWNTRLKIAIDA 217
N+++L+G C E + +++ +M+ G L + L+ + P +P T LK +D
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-Y 276
A + +L S ++ ++RD A N +L ++DFGL+K G+ + RI
Sbjct: 157 ALGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK-KIYSGDYYRQGRIAKMPV 213
Query: 277 GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRR 336
+ A E +A KSDV+ FGV + E+ T R + H + D+ L R
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYDY----LLHGHR 267
Query: 337 LKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPS-------MEEVLETLQNI 385
LK+ D L+E Y +I+ C +P +RP+ +E++LE+L ++
Sbjct: 268 LKQPEDC-LDELY---------EIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDV 313
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 32/212 (15%)
Query: 107 LGEGGFGRVFKG-W---VDHKTL---APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+G G FG V+KG W V K L APT P +Q + EV L
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT--------------PQQLQAFKN---EVGVL 58
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
K H N++ +GY Q +V ++ + SL +HL + + + IA A+
Sbjct: 59 RKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQ 115
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +LH+ KS+I+RD K++NI L K+ DFGLA SH ++ G+ +
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 280 APEYVAT---GHLYVKSDVYGFGVVLLEMLTG 308
APE + +SDVY FG+VL E++TG
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 70
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 71 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 130 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESL 185
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 228
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKK 395
+ P +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 229 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 283
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 121/292 (41%), Gaps = 34/292 (11%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG FG+VF + L P +S + +++Q E + L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQDKMLVAVKALKEASESAR--QDFQREAELLTMLQHQH 104
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKG------------SAEPLPWNTRLKIA 214
+V+ G C E R L+V+EYM+ G L L G + PL L +A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
A + +L + ++RD N L+ K+ DFG+++ V R M
Sbjct: 165 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
+ PE + +SDV+ FGVVL E+ T + + E A +T
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQG 276
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
R L++ PR P A++ G C + EP+ R S+++V LQ ++
Sbjct: 277 RELER---PRACP--PEVYAIMRG-----CWQREPQQRHSIKDVHARLQALA 318
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 71
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 186
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 229
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKK 395
+ P +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 284
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 71
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 186
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 229
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKK 395
+ P +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 284
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 36/282 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 74
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESL 189
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 232
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ P +++ C + P +RPS E+ + + +
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 9/156 (5%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
AE + + H LV+L ++ +++ EYM+ GSL + L + S L N L +
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDM 114
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A A+ + F+ E++ I+RD +A+NIL+ + + K++DFGLA+L ++ T R
Sbjct: 115 AAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDAEXTAREG 169
Query: 274 GTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + G +KSDV+ FG++L E++T
Sbjct: 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 121/292 (41%), Gaps = 34/292 (11%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG FG+VF + L P +S + +++Q E + L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQDKMLVAVKALKEASESAR--QDFQREAELLTMLQHQH 75
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKG------------SAEPLPWNTRLKIA 214
+V+ G C E R L+V+EYM+ G L L G + PL L +A
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
A + +L + ++RD N L+ K+ DFG+++ V R M
Sbjct: 136 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
+ PE + +SDV+ FGVVL E+ T + + E A +T
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQG 247
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
R L++ PR P A++ G C + EP+ R S+++V LQ ++
Sbjct: 248 RELER---PRACP--PEVYAIMRG-----CWQREPQQRHSIKDVHARLQALA 289
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 121/292 (41%), Gaps = 34/292 (11%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG FG+VF + L P +S + +++Q E + L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQDKMLVAVKALKEASESAR--QDFQREAELLTMLQHQH 81
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKG------------SAEPLPWNTRLKIA 214
+V+ G C E R L+V+EYM+ G L L G + PL L +A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
A + +L + ++RD N L+ K+ DFG+++ V R M
Sbjct: 142 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
+ PE + +SDV+ FGVVL E+ T + + E A +T
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQG 253
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
R L++ PR P A++ G C + EP+ R S+++V LQ ++
Sbjct: 254 RELER---PRACP--PEVYAIMRG-----CWQREPQQRHSIKDVHARLQALA 295
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 82
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 83 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 142 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 197
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 198 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 240
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKK 395
+ P +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 241 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 295
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 74
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 189
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT 307
A +KSDV+ FGV+L E+ T
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 36/282 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 73
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 133 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 188
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 189 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 231
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ P +++ C + P +RPS E+ + + +
Sbjct: 232 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 36/282 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 74
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 189
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 232
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ P +++ C + P +RPS E+ + + +
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 147 QGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLP 206
+ L+ ++ EV + SH N+V +I ED + LV EY++ +L ++ G PL
Sbjct: 53 ETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG---PLS 109
Query: 207 WNTRLKIA---IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPID 263
+T + +D K H+ + +++RD K NIL+D + K+ DFG+AK +
Sbjct: 110 VDTAINFTNQILDGIK-----HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK-ALSE 163
Query: 264 GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ T ++GT Y +PE +D+Y G+VL EML G
Sbjct: 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 107 LGEGGFGRVFKGWV--DHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
+G G FG VF G + D+ +A + P ++ ++ E + L ++SH
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVA--------VKSCRETLPPDLKA--KFLQEARILKQYSH 171
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
PN+V+LIG C + + +V E +Q G L +G+ L T L++ DAA + +L
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYL 229
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGYAAPEY 283
S K I+RD A N L+ K+SDFG+++ DG + + + APE
Sbjct: 230 ES--KCCIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEA 286
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
+ G +SDV+ FG++L E + L P+L++++ ++ ++
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS---------------LGASPYPNLSNQQT-REFVEK 330
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
P +++ +C EP RPS + + LQ+I
Sbjct: 331 GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 56/290 (19%)
Query: 107 LGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLG 160
LG G FG V+ G W V KTL P +P+S E + +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTM-----------SPESFL------EEAQIMK 59
Query: 161 KFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKD 220
K H LV+L E+ ++ V EYM KGSL + L + G L + +A A
Sbjct: 60 KLKHDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAG 117
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GY 278
+ ++ + I+RD +++NIL+ K++DFGLA+L I+ N T R + +
Sbjct: 118 MAYIERM--NYIHRDLRSANILVGNGLICKIADFGLARL--IEDNEX-TARQGAKFPIKW 172
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLK 338
APE G +KSDV+ FG++L E++T R P + ++ L+
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRV---------------PYPGMNNREVLE 217
Query: 339 KIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++ E Y P + +++I C + +P+ RP+ E + L++
Sbjct: 218 QV-----ERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLED 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + AE + L+ K + +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 134 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 36/282 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 69
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 184
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 227
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ P +++ C + P +RPS E+ + + +
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 36/282 (12%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 69
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL- 127
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVTTRIMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L D +H + + APE +
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 184
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 227
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ P +++ C + P +RPS E+ + + +
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 107 LGEGGFGRVFKGWV--DHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
+G G FG VF G + D+ +A + P ++ ++ E + L ++SH
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVA--------VKSCRETLPPDLKA--KFLQEARILKQYSH 171
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
PN+V+LIG C + + +V E +Q G L +G+ L T L++ DAA + +L
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYL 229
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YGYAAPEY 283
S K I+RD A N L+ K+SDFG+++ DG + + + APE
Sbjct: 230 ES--KCCIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEA 286
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
+ G +SDV+ FG++L E + L P+L++++ ++ ++
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS---------------LGASPYPNLSNQQT-REFVEK 330
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
P +++ +C EP RPS + + LQ+I
Sbjct: 331 GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 117/241 (48%), Gaps = 29/241 (12%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
R++ +E +G+F HPN++ L G + + +++ EYM+ GSL+ L + +
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 119
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
+ I + + +L S+ S ++RD A NIL++ + K+SDFG++++ D + T
Sbjct: 120 GMLRGIGSG--MKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 270 TRIMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
TR + APE +A SDV+ +G+V+ E+++ GE D
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS----------YGERPYWD--- 222
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++++ +K I EE Y P+ + Q+++ C + E +RP +++ L
Sbjct: 223 --MSNQDVIKAI-----EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDK 275
Query: 385 I 385
+
Sbjct: 276 L 276
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 29/239 (12%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA-EPLPWNT 209
E+ E + + K SHP LVK G C ++ +V EY+ G L N+L G EP +
Sbjct: 49 EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQ 105
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
L++ D + + FL S + I+RD A N L+D K+SDFG+ + + + +V+
Sbjct: 106 LLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVS 161
Query: 270 TRIMGT---YGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDF 326
+ +GT ++APE KSDV+ FG+++ E+ + L + + + V++
Sbjct: 162 S--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS-LGKMPYDLYTNSEVVL-- 216
Query: 327 ARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
++ RL + P + QI+ C P+ RP+ +++L +++ +
Sbjct: 217 ---KVSQGHRLYR----------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E++ L F HP+++KL F +V EY+ G L +++ + G E + RL
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME-ARRLFQQ 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
I +A D H V++RD K N+LLD NAK++DFGL+ + + G
Sbjct: 120 ILSAVDYCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRDSCG 172
Query: 275 TYGYAAPEYVATGHLYV--KSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
+ YAAPE V +G LY + D++ GV+L +L G D EHV P+L
Sbjct: 173 SPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-----EHV------PTLF 220
Query: 333 DKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K R P + +++ L+ +P R +++++ E
Sbjct: 221 KKIRGGVFYIPEYLNRS-------VATLLMHMLQVDPLKRATIKDIRE 261
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 39/295 (13%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 71
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR-IMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L + G+++ + APE +
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAPAGAKFPIKWTAPESL 186
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 229
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKK 395
+ P +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 284
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 33/242 (13%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
AE + + H NLV+L+G E++ L +V EYM KGSL ++L +G + L + LK
Sbjct: 54 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLK 112
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
++D + + +L + + ++RD A N+L+ AK+SDFGL K + +S T
Sbjct: 113 FSLDVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGK 166
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
+ + APE + KSDV+ FG++L E+ + R V + R L
Sbjct: 167 LPV-KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLK 212
Query: 333 DKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVI 388
D + PR+E+ Y P +++ C + RPS ++ E L++I
Sbjct: 213 D-------VVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 265
Query: 389 EI 390
E+
Sbjct: 266 EL 267
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 29/241 (12%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
R++ +E +G+F HPN++ L G + + +++ EYM+ GSL+ L RK +
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGR---FTV 109
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
+ + + S+ S ++RD A NIL++ + K+SDFG++++ D + T
Sbjct: 110 IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 169
Query: 270 TRIMGT-YGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
TR + APE +A SDV+ +G+V+ E+++ GE D
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS----------YGERPYWD--- 216
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++++ +K I EE Y P+ + Q+++ C + E +RP +++ L
Sbjct: 217 --MSNQDVIKAI-----EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDK 269
Query: 385 I 385
+
Sbjct: 270 L 270
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 39/295 (13%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG G +G V++G W + D+++ + E+ E + + HP
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL----------KEDTME-VEEFLKEAAVMKEIKHP 70
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
NLV+L+G C + F ++ E+M G+L ++L R+ + + + L +A + + +L
Sbjct: 71 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR-IMGTYGYAAPEYV 284
+K+ I+RD A N L+ ++ K++DFGL++L + G+++ + APE +
Sbjct: 130 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAPAGAKFPIKWTAPESL 185
Query: 285 ATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
A +KSDV+ FGV+L E+ T G+ P + D ++ ++++
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEK 228
Query: 344 RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV---LETLQNISVIEIEPKKK 395
+ P +++ C + P +RPS E+ ET+ S I E +K+
Sbjct: 229 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 283
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 94/233 (40%), Gaps = 48/233 (20%)
Query: 107 LGEGGFGRVFK----GWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKF 162
+GEG FGRVF+ G + ++ D +Q E + +F
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD-------FQREAALMAEF 107
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE------------------- 203
+PN+VKL+G C + L++EYM G L N R S
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 204 ---PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGL---- 256
PL +L IA A + +L SE+ ++RD N L+ + K++DFGL
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 257 --AKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
A DGN + R M PE + +SDV+ +GVVL E+ +
Sbjct: 225 YSADYYKADGNDAIPIRWM------PPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N+R +G+G F +V + + NP S+Q L EV+ +
Sbjct: 16 NYRLQKTIGKGNFAKVKLA----RHVLTGREVAVKIIDKTQLNPTSLQKLFR---EVRIM 68
Query: 160 GKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK 219
+HPN+VKL ++ LV EY G + ++L G + + + + A +
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 128
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +K +++RD KA N+LLDG N K++DFG + + GN T G+ YA
Sbjct: 129 -----YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDT--FCGSPPYA 180
Query: 280 APEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
APE + G Y + DV+ GV+L +++G D
Sbjct: 181 APE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 33/242 (13%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
AE + + H NLV+L+G E++ L +V EYM KGSL ++L +G + L + LK
Sbjct: 63 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLK 121
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
++D + + +L + + ++RD A N+L+ AK+SDFGL K + +S T
Sbjct: 122 FSLDVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGK 175
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
+ + APE + KSDV+ FG++L E+ + R V + R L
Sbjct: 176 LPV-KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLK 221
Query: 333 DKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVI 388
D + PR+E+ Y P +++ C + RPS ++ E L++I
Sbjct: 222 D-------VVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274
Query: 389 EI 390
E+
Sbjct: 275 EL 276
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 123/293 (41%), Gaps = 38/293 (12%)
Query: 91 LQDLRAATKN-FRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGL 149
+Q+L+A + F +G+G FG VFKG +D++T D
Sbjct: 13 MQNLKADPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDI---- 67
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
Q E+ L + P + K G +D + ++ EY+ GS + L G PL
Sbjct: 68 ---QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG---PLDETQ 120
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
I + K L +LHS +K I+RD KA+N+LL KL+DFG+A G +
Sbjct: 121 IATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKR 176
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
+GT + APE + K+D++ G+ +E+ G P L+ P
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP 236
Query: 330 SLTDKRRLKKIMDPRLEEQY--PIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
P LE Y P+K + + CL EP RP+ +E+L+
Sbjct: 237 -------------PTLEGNYSKPLK------EFVEACLNKEPSFRPTAKELLK 270
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 33/242 (13%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
AE + + H NLV+L+G E++ L +V EYM KGSL ++L +G + L + LK
Sbjct: 48 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLK 106
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
++D + + +L + + ++RD A N+L+ AK+SDFGL K + +S T
Sbjct: 107 FSLDVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGK 160
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
+ + APE + KSDV+ FG++L E+ + R V + R L
Sbjct: 161 LPV-KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLK 206
Query: 333 DKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVI 388
D + PR+E+ Y P +++ C + RPS ++ E L++I
Sbjct: 207 D-------VVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 259
Query: 389 EI 390
E+
Sbjct: 260 EL 261
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 33/242 (13%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
AE + + H NLV+L+G E++ L +V EYM KGSL ++L +G + L + LK
Sbjct: 235 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLK 293
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
++D + + +L + + ++RD A N+L+ AK+SDFGL K + +S T
Sbjct: 294 FSLDVCEAMEYLEGN--NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGK 347
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
+ + APE + KSDV+ FG++L E+ + R V + R L
Sbjct: 348 LPV-KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLK 393
Query: 333 DKRRLKKIMDPRLEEQYPI---KGALLAGQIIIK-CLEAEPKNRPSMEEVLETLQNISVI 388
D + PR+E+ Y + G A ++K C + RP+ ++ E L++I
Sbjct: 394 D-------VVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446
Query: 389 EI 390
E+
Sbjct: 447 EL 448
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 60/300 (20%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 310
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 311 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGETGKY---LRLP 363
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 364 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 420
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
R + + APE G +KSDV+ FG++L E+ T R
Sbjct: 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PY 465
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
P + ++ L ++ E Y P + ++ +C EP+ RP+ E + L++
Sbjct: 466 PGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
R++ +E +G+F HPN+++L G R ++V EYM+ GSL+ L +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
+ + A + S+ ++RD A N+L+D + K+SDFGL+++ D ++ T
Sbjct: 155 GMLRGVGAG----MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 270 TRIMGTYG-----YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
T T G + APE +A SDV+ FGVV+ E+L
Sbjct: 211 T----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 33/210 (15%)
Query: 107 LGEGGFGRVFKGW------VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLG 160
LG G FG V+ G+ V KTL P S+Q E E +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--------------SVQAFLE---EANLMK 63
Query: 161 KFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAK 219
H LV+L + ++ EYM KGSL + L +G LP + + A+
Sbjct: 64 TLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAE 121
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--G 277
+ ++ K+ I+RD +A+N+L+ S K++DFGLA++ I+ N + T R +
Sbjct: 122 GMAYIE--RKNYIHRDLRAANVLVSESLMCKIADFGLARV--IEDNEY-TAREGAKFPIK 176
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ APE + G +KSDV+ FG++L E++T
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 117/305 (38%), Gaps = 41/305 (13%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N + LG G FG+V + ++ D + L +E+K +
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIM 88
Query: 160 GKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA---------------- 202
H N+V L+G C L++ EY G L N L RK A
Sbjct: 89 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLD 148
Query: 203 ----EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK 258
PL L + A+ + FL S K+ I+RD A N+LL + AK+ DFGLA+
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 259 LGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPS 318
D N V + APE + V+SDV+ +G++L E+ + L N
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLN--- 259
Query: 319 GEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
P + + K++ + P I+ C EP +RP+ +++
Sbjct: 260 --------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
Query: 379 LETLQ 383
LQ
Sbjct: 312 CSFLQ 316
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 60/300 (20%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 227
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 228 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGETGKY---LRLP 280
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 337
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
R + + APE G +KSDV+ FG++L E+ T R
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PY 382
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
P + ++ L ++ E Y P + ++ +C EP+ RP+ E + L++
Sbjct: 383 PGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
R++ +E +G+F HPN+++L G R ++V EYM+ GSL+ L +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
+ + A + S+ ++RD A N+L+D + K+SDFGL+++ D ++ T
Sbjct: 155 GMLRGVGAG----MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 270 TRIMGTYG-----YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
T T G + APE +A SDV+ FGVV+ E+L
Sbjct: 211 T----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 121/300 (40%), Gaps = 59/300 (19%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+F+ ++G GGFG+VFK H+ T + + EVK L
Sbjct: 12 DFKEIELIGSGGFGQVFKA--KHRIDGKTYVIKRVKYNNEKA-----------EREVKAL 58
Query: 160 GKFSHPNLVKLIGYCWE-----------------DRQFLLVYEYMQKGSLENHLFRKGSA 202
K H N+V G CW+ + + E+ KG+LE + K
Sbjct: 59 AKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRG 116
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
E L L++ K + ++HS K +I RD K SNI L + K+ DFGL
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 174
Query: 263 DGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
DG R GT Y +PE +++ + D+Y G++L E+ L DT + +
Sbjct: 175 DGKR---XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL---LHVCDTAFETSK-F 227
Query: 323 LVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETL 382
D ++D I D + ++ K L +P++RP+ E+L TL
Sbjct: 228 FTDLRDGIISD------IFDKK------------EKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPD-SIQGLREWQAEVKF 158
+F + LG G G VFK V HK P+ P Q +RE Q
Sbjct: 69 DFEKISELGAGNGGVVFK--VSHK---PSGLVMARKLIHLEIKPAIRNQIIRELQV---- 119
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
L + + P +V G + D + + E+M GSL+ L + G +P K++I
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 176
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGTYG 277
K LT+L K +++RD K SNIL++ KL DFG++ +L NS V TR
Sbjct: 177 KGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----S 230
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
Y +PE + H V+SD++ G+ L+EM G
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 17/237 (7%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
++F+ +LG+G F V++ H L +Q EVK
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN------EVKI 64
Query: 159 LGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
+ HP++++L Y +ED ++ LV E G + +L K +P N
Sbjct: 65 HCQLKHPSILELYNY-FEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQI 121
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
+ +LHS +++RD SN+LL + N K++DFGLA + H T + GT
Sbjct: 122 ITGMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPN 177
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPS---GEHVLVDFARPSL 331
Y +PE ++SDV+ G + +L G DT+ + VL D+ PS
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF 234
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 60/300 (20%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 227
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 228 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGETGKY---LRLP 280
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 337
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
R + + APE G +KSDV+ FG++L E+ T R
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PY 382
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
P + ++ L ++ E Y P + ++ +C EP+ RP+ E + L++
Sbjct: 383 PGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 38 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + FL
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKFL 150
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK--LGPIDGNSHVTTRIMGTYGYAAPE 282
S K ++RD A N +LD + K++DFGLA+ L + H T + A E
Sbjct: 151 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK--I 340
+ T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 341 MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 264 PDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 134 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPD-SIQGLREWQAEVKF 158
+F + LG G G VFK V HK P+ P Q +RE Q
Sbjct: 34 DFEKISELGAGNGGVVFK--VSHK---PSGLVMARKLIHLEIKPAIRNQIIRELQV---- 84
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
L + + P +V G + D + + E+M GSL+ L + G +P K++I
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 141
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGTYG 277
K LT+L K +++RD K SNIL++ KL DFG++ +L NS V TR
Sbjct: 142 KGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----S 195
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
Y +PE + H V+SD++ G+ L+EM G
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 25 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 138 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 131 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 17 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 130 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 131 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 60/300 (20%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 54
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 55 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGETGKY---LRLP 107
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 108 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 164
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
R + + APE G +KSDV+ FG++L E+ T R
Sbjct: 165 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PY 209
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
P + ++ L ++ E Y P + ++ +C EP+ RP+ E + L++
Sbjct: 210 PGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 22 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 135 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 115/276 (41%), Gaps = 37/276 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G FG VFKG +D++T D Q E+ L + P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDI-------QQEITVLSQCDSPY 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+ K G +D + ++ EY+ GS + L G PL I + K L +LHS
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG---PLDETQIATILREILKGLDYLHS 122
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+K I+RD KA+N+LL KL+DFG+A G + +GT + APE +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 287 GHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLE 346
K+D++ G+ +E+ G P L+ P P LE
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 225
Query: 347 EQY--PIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
Y P+K + + CL EP RP+ +E+L+
Sbjct: 226 GNYSKPLK------EFVEACLNKEPSFRPTAKELLK 255
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 16 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 129 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 60/300 (20%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 227
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 228 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VGEYMSKGSLLD--FLKGETGKY---LRLP 280
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 337
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
R + + APE G +KSDV+ FG++L E+ T R
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PY 382
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
P + ++ L ++ E Y P + ++ +C EP+ RP+ E + L++
Sbjct: 383 PGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 23 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 136 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 115/276 (41%), Gaps = 37/276 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G FG VFKG +D++T D Q E+ L + P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDI-------QQEITVLSQCDSPY 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+ K G +D + ++ EY+ GS + L G PL I + K L +LHS
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG---PLDETQIATILREILKGLDYLHS 122
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+K I+RD KA+N+LL KL+DFG+A G + +GT + APE +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 287 GHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLE 346
K+D++ G+ +E+ G P L+ P P LE
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 225
Query: 347 EQY--PIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
Y P+K + + CL EP RP+ +E+L+
Sbjct: 226 GNYSKPLK------EFVEACLNKEPSFRPTAKELLK 255
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 24 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 137 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 49 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 162 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 36 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 149 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSI--QGLREWQAEVK 157
+F + LG G G VFK V HK P+ P +I Q +RE Q
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PSGLVMARKLIHLEIKP-AIRNQIIRELQV--- 57
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
L + + P +V G + D + + E+M GSL+ L + G +P K++I
Sbjct: 58 -LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAV 113
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGTY 276
K LT+L K +++RD K SNIL++ KL DFG++ +L NS V TR
Sbjct: 114 IKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----- 167
Query: 277 GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
Y +PE + H V+SD++ G+ L+EM G
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 36 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 149 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSI--QGLREWQAEVK 157
+F + LG G G VFK V HK P+ P +I Q +RE Q
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PSGLVMARKLIHLEIKP-AIRNQIIRELQV--- 57
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
L + + P +V G + D + + E+M GSL+ L + G +P K++I
Sbjct: 58 -LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAV 113
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGTY 276
K LT+L K +++RD K SNIL++ KL DFG++ +L NS V TR
Sbjct: 114 IKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----- 167
Query: 277 GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
Y +PE + H V+SD++ G+ L+EM G
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 39/314 (12%)
Query: 85 YLKMFTLQDLRAATKNF---------RPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXX 135
++ FT +D A + F + + ++G G FG V G H L P
Sbjct: 10 FIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSG---HLKL-PGKREIFVA 65
Query: 136 XXXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENH 195
S Q R++ +E +G+F HPN++ L G + +++ E+M+ GSL++
Sbjct: 66 IKTLKSGYTEKQR-RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 124
Query: 196 LFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFG 255
L + + + I A + ++ + ++RD A NIL++ + K+SDFG
Sbjct: 125 LRQNDGQFTVIQLVGMLRGIAAGMK----YLADMNYVHRDLAARNILVNSNLVCKVSDFG 180
Query: 256 LAKLGPIDGNSHVTTRIMG---TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRAL 312
L++ D + T +G + APE + SDV+ +G+V+ E+++
Sbjct: 181 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS----- 235
Query: 313 DTNRPSGEHVLVDFARPSLTDKRRLKKI-MDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
GE D +T++ + I D RL AL Q+++ C + + +
Sbjct: 236 -----YGERPYWD-----MTNQDVINAIEQDYRLPPPMDCPSAL--HQLMLDCWQKDRNH 283
Query: 372 RPSMEEVLETLQNI 385
RP +++ TL +
Sbjct: 284 RPKFGQIVNTLDKM 297
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 61
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++++ EYM KGSL + F KG RL
Sbjct: 62 -QEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLD--FLKGEMGKY---LRLP 114
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 171
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSI--QGLREWQAEVK 157
+F + LG G G VFK V HK P+ P +I Q +RE Q
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PSGLVMARKLIHLEIKP-AIRNQIIRELQV--- 57
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
L + + P +V G + D + + E+M GSL+ L + G +P K++I
Sbjct: 58 -LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAV 113
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGTY 276
K LT+L K +++RD K SNIL++ KL DFG++ +L NS V TR
Sbjct: 114 IKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----- 167
Query: 277 GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
Y +PE + H V+SD++ G+ L+EM G
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPD-SIQGLREWQAEVKF 158
+F + LG G G VFK V HK P+ P Q +RE Q
Sbjct: 26 DFEKISELGAGNGGVVFK--VSHK---PSGLVMARKLIHLEIKPAIRNQIIRELQV---- 76
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
L + + P +V G + D + + E+M GSL+ L + G +P K++I
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 133
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGTYG 277
K LT+L K +++RD K SNIL++ KL DFG++ +L NS V TR
Sbjct: 134 KGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----S 187
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
Y +PE + H V+SD++ G+ L+EM G
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSI--QGLREWQAEVK 157
+F + LG G G VFK V HK P+ P +I Q +RE Q
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PSGLVMARKLIHLEIKP-AIRNQIIRELQV--- 57
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
L + + P +V G + D + + E+M GSL+ L + G +P K++I
Sbjct: 58 -LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAV 113
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGTY 276
K LT+L K +++RD K SNIL++ KL DFG++ +L NS V TR
Sbjct: 114 IKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----- 167
Query: 277 GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
Y +PE + H V+SD++ G+ L+EM G
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSI--QGLREWQAEVK 157
+F + LG G G VFK V HK P+ P +I Q +RE Q
Sbjct: 7 DFEKISELGAGNGGVVFK--VSHK---PSGLVMARKLIHLEIKP-AIRNQIIRELQV--- 57
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
L + + P +V G + D + + E+M GSL+ L + G +P K++I
Sbjct: 58 -LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAV 113
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGTY 276
K LT+L K +++RD K SNIL++ KL DFG++ +L NS V TR
Sbjct: 114 IKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR----- 167
Query: 277 GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
Y +PE + H V+SD++ G+ L+EM G
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 115/276 (41%), Gaps = 37/276 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G FG VFKG +D++T D Q E+ L + P
Sbjct: 35 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDI-------QQEITVLSQCDSPY 86
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+ K G +D + ++ EY+ GS + L G PL I + K L +LHS
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG---PLDETQIATILREILKGLDYLHS 142
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+K I+RD KA+N+LL KL+DFG+A G + +GT + APE +
Sbjct: 143 EKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 287 GHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLE 346
K+D++ G+ +E+ G P L+ P P LE
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 245
Query: 347 EQY--PIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
Y P+K + + CL EP RP+ +E+L+
Sbjct: 246 GNYSKPLK------EFVEACLNKEPSFRPTAKELLK 275
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 142 NPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS 201
NP S+Q L EV+ + +HPN+VKL ++ L+ EY G + ++L G
Sbjct: 51 NPTSLQKLFR---EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR 107
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
+ ++ + + A + + +K +++RD KA N+LLD N K++DFG +
Sbjct: 108 MKEKEARSKFRQIVSAVQ-----YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 162
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
+ G G+ YAAPE + G Y + DV+ GV+L +++G D
Sbjct: 163 VGGK---LDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 61
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 62 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VCEYMSKGSLLD--FLKGEMGKY---LRLP 114
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 171
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 131 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 51/294 (17%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLR---------EWQAEV 156
++G G FG V+KG + + P +I+ L+ ++ E
Sbjct: 51 VIGAGEFGEVYKGMLKTSS-------------GKKEVPVAIKTLKAGYTEKQRVDFLGEA 97
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAI 215
+G+FSH N+++L G + + +++ EYM+ G+L+ L K G L L+
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR--- 154
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT---RI 272
A + +L + + ++RD A NIL++ + K+SDFGL+++ D + TT +I
Sbjct: 155 GIAAGMKYL--ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
+ APE ++ SDV+ FG+V+ E++T RP E L+
Sbjct: 213 --PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT-----YGERPYWE----------LS 255
Query: 333 DKRRLKKIMDP-RLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+ +K I D RL A+ Q++++C + E RP +++ L +
Sbjct: 256 NHEVMKAINDGFRLPTPMDCPSAIY--QLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 123/313 (39%), Gaps = 72/313 (23%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
+F+ ++G GGFG+VFK H+ T + + EVK L
Sbjct: 13 DFKEIELIGSGGFGQVFKA--KHRIDGKTYVIRRVKYNNEKA-----------EREVKAL 59
Query: 160 GKFSHPNLVKLIGYCWE------------------------------DRQFLLVYEYMQK 189
K H N+V G CW+ + + E+ K
Sbjct: 60 AKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 190 GSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA 249
G+LE + K E L L++ K + ++HS K +I+RD K SNI L +
Sbjct: 119 GTLEQWI-EKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQV 175
Query: 250 KLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
K+ DFGL DG TR GT Y +PE +++ + D+Y G++L E+ L
Sbjct: 176 KIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL---L 229
Query: 310 RALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEP 369
DT + + D ++D I D + ++ K L +P
Sbjct: 230 HVCDTAFETSK-FFTDLRDGIISD------IFDKK------------EKTLLQKLLSKKP 270
Query: 370 KNRPSMEEVLETL 382
++RP+ E+L TL
Sbjct: 271 EDRPNTSEILRTL 283
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPD-SIQGLREWQAEVKF 158
+F + LG G G VFK V HK P+ P Q +RE Q
Sbjct: 10 DFEKISELGAGNGGVVFK--VSHK---PSGLVMARKLIHLEIKPAIRNQIIRELQV---- 60
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
L + + P +V G + D + + E+M GSL+ L + G +P K++I
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVI 117
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
K LT+L K +++RD K SNIL++ KL DFG++ ID + +GT Y
Sbjct: 118 KGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG-QLID---EMANEFVGTRSY 172
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+PE + H V+SD++ G+ L+EM G
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 61
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 62 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGEMGKY---LRLP 114
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 171
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 60/300 (20%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 58
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 59 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLD--FLKGETGKY---LRLP 111
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D + + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 112 QLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 168
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
R + + APE G +KSDV+ FG++L E+ T R
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PY 213
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
P + ++ L ++ E Y P + ++ +C EP+ RP+ E + L++
Sbjct: 214 PGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 52
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 53 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGEMGKY---LRLP 105
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 106 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 162
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 163 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 61
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 62 -QEAQVMKKIRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGEMGKY---LRLP 114
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 171
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 50
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 51 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGEMGKY---LRLP 103
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 104 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 160
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 161 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 116/299 (38%), Gaps = 36/299 (12%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N + LG G FG+V + ++ D + L +E+K +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIM 103
Query: 160 GKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSAEPL 205
H N+V L+G C L++ EY G L N L RK E L
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQL 163
Query: 206 PWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN 265
L + A+ + FL S K+ I+RD A N+LL + AK+ DFGLA+ D N
Sbjct: 164 SSRDLLHFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLV 324
V + APE + V+SDV+ +G++L E+ + GL
Sbjct: 222 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY------------ 269
Query: 325 DFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
P + + K++ + P I+ C EP +RP+ +++ LQ
Sbjct: 270 ----PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 61
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++++ EYM KGSL + F KG RL
Sbjct: 62 -QEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLD--FLKGEMGKY---LRLP 114
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N T
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEX-TA 171
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 142 NPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS 201
NP S+Q L EV+ + +HPN+VKL ++ L+ EY G + ++L G
Sbjct: 54 NPTSLQKLFR---EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR 110
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
+ ++ + + A + + +K +++RD KA N+LLD N K++DFG +
Sbjct: 111 MKEKEARSKFRQIVSAVQ-----YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
+ G G YAAPE + G Y + DV+ GV+L +++G D
Sbjct: 166 VGGK---LDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 39/294 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG FG+VF + L+PT +P ++ +++Q E + L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTKDKMLVAVKAL-KDP-TLAARKDFQREAELLTNLQHEH 78
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKG-------SAEP------LPWNTRLKI 213
+VK G C + ++V+EYM+ G L L G +P L + L I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A A + +L S + ++RD N L+ + K+ DFG+++ V M
Sbjct: 139 ASQIASGMVYLAS--QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
+ PE + +SDV+ FGV+L E+ T + + E + +T
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI------ECITQ 250
Query: 334 KRRLKKIMDPRL--EEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
R L++ PR+ +E Y +++ C + EP+ R +++E+ + L +
Sbjct: 251 GRVLER---PRVCPKEVY---------DVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 115/297 (38%), Gaps = 34/297 (11%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N + LG G FG+V + ++ D + L +E+K +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIM 103
Query: 160 GKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA-----------EPLPW 207
H N+V L+G C L++ EY G L N L RK L
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLST 163
Query: 208 NTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH 267
L + A+ + FL S K+ I+RD A N+LL + AK+ DFGLA+ D N
Sbjct: 164 RDLLHFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDF 326
V + APE + V+SDV+ +G++L E+ + GL
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-------------- 267
Query: 327 ARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
P + + K++ + P I+ C EP +RP+ +++ LQ
Sbjct: 268 --PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 60/300 (20%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 51
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ +V EYM KGSL + F KG RL
Sbjct: 52 -QEAQVMKKLRHEKLVQLYAVVSEE-PIXIVTEYMSKGSLLD--FLKGETGKY---LRLP 104
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N T
Sbjct: 105 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDN-EXTA 161
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
R + + APE G +KSDV+ FG++L E+ T R
Sbjct: 162 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PY 206
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
P + ++ L ++ E Y P + ++ +C EP+ RP+ E + L++
Sbjct: 207 PGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 19 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ EY+ GSL ++L + E + L+ K + +L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPEY 283
+ K I+R+ NIL++ K+ DFGL K+ P D + V + APE
Sbjct: 132 GT--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 114/297 (38%), Gaps = 34/297 (11%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N + LG G FG+V + ++ D + L +E+K +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIM 103
Query: 160 GKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
H N+V L+G C L++ EY G L N L RK L + IA A
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV--LETDPAFAIANSTA 161
Query: 219 KDLTFLHSSE-----------KSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH 267
LH S K+ I+RD A N+LL + AK+ DFGLA+ D N
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDF 326
V + APE + V+SDV+ +G++L E+ + GL
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-------------- 267
Query: 327 ARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
P + + K++ + P I+ C EP +RP+ +++ LQ
Sbjct: 268 --PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 32/285 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 38 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + FL
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKFL 150
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNS-HVTTRIMGTYGYAAPE 282
S K ++RD A N +LD + K++DFGLA+ + + +S H T + A E
Sbjct: 151 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK--I 340
+ T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 341 MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 264 PDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 32/285 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 42 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + FL
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKFL 154
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNS-HVTTRIMGTYGYAAPE 282
S K ++RD A N +LD + K++DFGLA+ + + +S H T + A E
Sbjct: 155 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK--I 340
+ T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYC 267
Query: 341 MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 268 PDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 12/204 (5%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V D P + + LR+++ E++ L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 167 LVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+VK G C+ R L+ E++ GSL +L + E + L+ K + +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGN-SHVTTRIMGTYGYAAPEY 283
+ K I+RD NIL++ K+ DFGL K+ P D V + APE
Sbjct: 134 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ V SDV+ FGVVL E+ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 32/285 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 37 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + FL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKFL 149
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNS-HVTTRIMGTYGYAAPE 282
S K ++RD A N +LD + K++DFGLA+ + + +S H T + A E
Sbjct: 150 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK--I 340
+ T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 341 MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 263 PDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 32/285 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 96 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + + AK + FL
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDL-IGFGLQVAKGMKFL 208
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNS-HVTTRIMGTYGYAAPE 282
S K ++RD A N +LD + K++DFGLA+ + + +S H T + A E
Sbjct: 209 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK--I 340
+ T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYC 321
Query: 341 MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 322 PDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 61
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KG L + F KG RL
Sbjct: 62 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VMEYMSKGCLLD--FLKGEMGKY---LRLP 114
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 171
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 32/285 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 35 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + FL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKFL 147
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNS-HVTTRIMGTYGYAAPE 282
S K ++RD A N +LD + K++DFGLA+ + + +S H T + A E
Sbjct: 148 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK--I 340
+ T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 341 MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 261 PDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 9/203 (4%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+LG+GG+G+VF+ V T A T + + +AE L + HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+V LI + L+ EY+ G L L R+G +T + + L LH
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMALGHLH 138
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
+K +IYRD K NI+L+ + KL+DFGL K DG VT GT Y APE +
Sbjct: 139 --QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAPEILM 194
Query: 286 TGHLYVKSDVYGFGVVLLEMLTG 308
D + G ++ +MLTG
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 33/210 (15%)
Query: 107 LGEGGFGRVFKGW------VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLG 160
LG G FG V+ G+ V KTL P S+Q E E +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--------------SVQAFLE---EANLMK 62
Query: 161 KFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAK 219
H LV+L ++ ++ E+M KGSL + L +G LP + + A+
Sbjct: 63 TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAE 120
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--G 277
+ ++ K+ I+RD +A+N+L+ S K++DFGLA++ I+ N + T R +
Sbjct: 121 GMAYIE--RKNYIHRDLRAANVLVSESLMCKIADFGLARV--IEDNEY-TAREGAKFPIK 175
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ APE + G +KS+V+ FG++L E++T
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 61
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 62 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGEMGKY---LRLP 114
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARL--IEDNEY-TA 171
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 32/285 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 37 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + FL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKFL 149
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNS-HVTTRIMGTYGYAAPE 282
S K ++RD A N +LD + K++DFGLA+ + + +S H T + A E
Sbjct: 150 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK--I 340
+ T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 341 MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 263 PDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 9/203 (4%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+LG+GG+G+VF+ V T A T + + +AE L + HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+V LI + L+ EY+ G L L R+G +T + + L LH
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMALGHLH 138
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
+K +IYRD K NI+L+ + KL+DFGL K DG VT GT Y APE +
Sbjct: 139 --QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILM 194
Query: 286 TGHLYVKSDVYGFGVVLLEMLTG 308
D + G ++ +MLTG
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 60/300 (20%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 58
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 59 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLD--FLKGETGKY---LRLP 111
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D + + + + ++RD +A+NIL+ + K++DFGLA+L I+ N T
Sbjct: 112 QLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEW-TA 168
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
R + + APE G +KSDV+ FG++L E+ T R
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PY 213
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
P + ++ L ++ E Y P + ++ +C EP+ RP+ E + L++
Sbjct: 214 PGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 36/219 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFL----- 61
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KG L + F KG RL
Sbjct: 62 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGCLLD--FLKGEMGKY---LRLP 114
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGLA+L I+ N + T
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEY-TA 171
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R + + APE G +KSDV+ FG++L E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 118/285 (41%), Gaps = 32/285 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 36 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 148
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK--LGPIDGNSHVTTRIMGTYGYAAPE 282
S K ++RD A N +LD + K++DFGLA+ + H T + A E
Sbjct: 149 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK--I 340
+ T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 341 MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 262 PDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY +G + L + + T +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI--- 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 120 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 173
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 217
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 218 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWN 208
RE+ +E +G+F HPN+++L G +++ E+M+ G+L++ L G +
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 121
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
L+ A + +L +E S ++RD A NIL++ + K+SDFGL++ + +
Sbjct: 122 GMLR---GIASGMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 269 TTRIMG---TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
T +G + APE +A SD + +G+V+ E+++
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 110/241 (45%), Gaps = 25/241 (10%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLEN-HLFRKGSAEPLPWNTRLKI 213
E+K L + H NLV L+ C + +++ LV+E++ L++ LF G L + K
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKY 129
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ F HS ++I+RD K NIL+ S KL DFG A+ G V +
Sbjct: 130 LFQIINGIGFCHSH--NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEV 185
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG--LRALDTNRPSGEHVLVD----- 325
T Y APE + Y K+ DV+ G ++ EM G L D++ H+++
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLI 245
Query: 326 ------FARPSLTDKRRLKKIMDPR-LEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
F + + RL +I + LE +YP K + + + KCL +P RP E+
Sbjct: 246 PRHQELFNKNPVFAGVRLPEIKEREPLERRYP-KLSEVVIDLAKKCLHIDPDKRPFCAEL 304
Query: 379 L 379
L
Sbjct: 305 L 305
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 60/300 (20%)
Query: 99 KNFRPDTMLGEGGFGRVFKG-W-----VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
++ R + LG+G FG V+ G W V KTL P +P++
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNM-----------SPEAFL----- 228
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + + K H LV+L E+ ++ V EYM KGSL + F KG RL
Sbjct: 229 -QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLD--FLKGEMGKY---LRLP 281
Query: 213 IAIDAAKDLT--FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+D A + + + ++RD +A+NIL+ + K++DFGL +L I+ N + T
Sbjct: 282 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRL--IEDNEY-TA 338
Query: 271 RIMGTY--GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
R + + APE G +KSDV+ FG++L E+ T R
Sbjct: 339 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PY 383
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
P + ++ L ++ E Y P + ++ +C +P+ RP+ E + L++
Sbjct: 384 PGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 140
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 141 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 194
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 238
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 239 ETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 13/187 (6%)
Query: 152 WQAEVKFLGKFSHPNLVKLIGYCWEDRQF----LLVYEYMQKGSLENHLFRKGSAEPLPW 207
++ E + +HP +V + + +V EY+ +L + + +G P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTP 115
Query: 208 NTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH 267
+++ DA + L F H + +I+RD K +NI++ + K+ DFG+A+ GNS
Sbjct: 116 KRAIEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 268 V-TTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSG---EHVL 323
T ++GT Y +PE + +SDVY G VL E+LTG + P +HV
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 324 VDFARPS 330
D PS
Sbjct: 234 EDPIPPS 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 182 LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI 241
+V EY+ +L + + +G P+ +++ DA + L F H + +I+RD K +NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANI 147
Query: 242 LLDGSYNAKLSDFGLAKLGPIDGNS-HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGV 300
L+ + K+ DFG+A+ GNS T ++GT Y +PE + +SDVY G
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 301 VLLEMLTGLRALDTNRPSG---EHVLVDFARPS 330
VL E+LTG + P +HV D PS
Sbjct: 208 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 120 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 173
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 217
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 218 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 182 LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI 241
+V EY+ +L + + +G P+ +++ DA + L F H + +I+RD K +NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANI 147
Query: 242 LLDGSYNAKLSDFGLAKLGPIDGNSHV-TTRIMGTYGYAAPEYVATGHLYVKSDVYGFGV 300
++ + K+ DFG+A+ GNS T ++GT Y +PE + +SDVY G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 301 VLLEMLTGLRALDTNRPSG---EHVLVDFARPS 330
VL E+LTG + P +HV D PS
Sbjct: 208 VLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPS 240
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 131
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 132 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 185
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 229
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 230 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 98/223 (43%), Gaps = 20/223 (8%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
R +F +LG+G FG+V D K + D +
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVM--LADRKGTEELYAIKILKKDVVIQDDD----VECTMV 68
Query: 155 EVKFLGKFSHPNLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRL 211
E + L P + + C++ DR + V EY+ G L H+ + G EP
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYF-VMEYVNGGDLMYHIQQVGKFKEPQAVFYAA 127
Query: 212 KIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+I+I L FLH ++ +IYRD K N++LD + K++DFG+ K +DG VTTR
Sbjct: 128 EISIG----LFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VTTR 178
Query: 272 -IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
GT Y APE +A D + +GV+L EML G D
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V +G ++ D+ + +RE Q + +
Sbjct: 15 DIELGCGNFGSVRQG--VYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ----IMHQLD 68
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V+LIG C + +LV E G L H F G E +P + ++ + + +
Sbjct: 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVSMGMKY 125
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVTTRIMGTY--GYAA 280
L EK+ ++RD A N+LL + AK+SDFGL+K LG D S+ T R G + + A
Sbjct: 126 LE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD--SYYTARSAGKWPLKWYA 181
Query: 281 PEYVATGHLYVKSDVYGFGVVLLEMLT 307
PE + +SDV+ +GV + E L+
Sbjct: 182 PECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 114
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 115 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTELCG 168
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 212
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 213 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 182 LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI 241
+V EY+ +L + + +G P+ +++ DA + L F H + +I+RD K +NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANI 147
Query: 242 LLDGSYNAKLSDFGLAKLGPIDGNSHV-TTRIMGTYGYAAPEYVATGHLYVKSDVYGFGV 300
++ + K+ DFG+A+ GNS T ++GT Y +PE + +SDVY G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 301 VLLEMLTGLRALDTNRPSG---EHVLVDFARPS 330
VL E+LTG + P +HV D PS
Sbjct: 208 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 55 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 167
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT---YGYAAP 281
S K ++RD A N +LD + K++DFGLA+ D + G + A
Sbjct: 168 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK-- 339
E + T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEY 279
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 280 CPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 120 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 173
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 217
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 218 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 114
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 115 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 168
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 212
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 213 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 52/315 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
KN LGEG FG+V K H ++P LR+ +E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE---LRDLLSEFNV 79
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEP-------------- 204
L + +HP+++KL G C +D LL+ EY + GSL L P
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 205 -------LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA 257
L + A ++ + +L +E S+++RD A NIL+ K+SDFGL+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 258 KLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLY-----VKSDVYGFGVVLLEMLTGLRAL 312
+ + +S V + G +++A L+ +SDV+ FGV+L E++T L
Sbjct: 198 R-DVYEEDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----L 248
Query: 313 DTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNR 372
N G RL ++ + P + +++++C + EP R
Sbjct: 249 GGNPYPG------------IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
Query: 373 PSMEEVLETLQNISV 387
P ++ + L+ + V
Sbjct: 297 PVFADISKDLEKMMV 311
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 32 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 144
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT---YGYAAP 281
S K ++RD A N +LD + K++DFGLA+ D + G + A
Sbjct: 145 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK-- 339
E + T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEY 256
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 257 CPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWN 208
RE+ +E +G+F HPN+++L G +++ E+M+ G+L++ L G +
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 119
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
L+ A + +L +E S ++RD A NIL++ + K+SDFGL++ + +
Sbjct: 120 GMLR---GIASGMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
Query: 269 TTRIMG---TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
T +G + APE +A SD + +G+V+ E+++
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 37 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 149
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT---YGYAAP 281
S K ++RD A N +LD + K++DFGLA+ D + G + A
Sbjct: 150 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK-- 339
E + T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEY 261
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 262 CPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
AT + P +G G +G V+K H I +RE A +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE-VALL 65
Query: 157 KFLGKFSHPNLVKLIGYCWEDR-----QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRL 211
+ L F HPN+V+L+ C R + LV+E++ + L +L K LP T
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIK 123
Query: 212 KIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+ + L FLH++ +++RD K NIL+ KL+DFGLA+ I T
Sbjct: 124 DLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALTP 178
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEML 306
++ T Y APE + D++ G + EM
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 182 LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI 241
+V EY+ +L + + +G P+ +++ DA + L F H + +I+RD K +NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANI 147
Query: 242 LLDGSYNAKLSDFGLAKLGPIDGNSHV-TTRIMGTYGYAAPEYVATGHLYVKSDVYGFGV 300
++ + K+ DFG+A+ GNS T ++GT Y +PE + +SDVY G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 301 VLLEMLTGLRALDTNRPSG---EHVLVDFARPS 330
VL E+LTG + P +HV D PS
Sbjct: 208 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 105 TMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
+ LG+G FG V + L S PD R++Q E++ L
Sbjct: 16 SQLGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHS 70
Query: 165 PNLVKLIGYCW-EDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+VK G + RQ L LV EY+ G L + L R + L + L + K +
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGME 128
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI-MGTYGYAAP 281
+L S + ++RD A NIL++ + K++DFGLAKL P+D + +V + AP
Sbjct: 129 YLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLT 307
E ++ +SDV+ FGVVL E+ T
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 35 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 147
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT---YGYAAP 281
S K ++RD A N +LD + K++DFGLA+ D + G + A
Sbjct: 148 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK-- 339
E + T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEY 259
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 260 CPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 105 TMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
+ LG+G FG V + L S PD R++Q E++ L
Sbjct: 17 SQLGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHS 71
Query: 165 PNLVKLIGYCW-EDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+VK G + RQ L LV EY+ G L + L R + L + L + K +
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGME 129
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI-MGTYGYAAP 281
+L S + ++RD A NIL++ + K++DFGLAKL P+D + +V + AP
Sbjct: 130 YLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLT 307
E ++ +SDV+ FGVVL E+ T
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 36 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 148
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT---YGYAAP 281
S K ++RD A N +LD + K++DFGLA+ D + G + A
Sbjct: 149 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK-- 339
E + T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEY 260
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 261 CPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+HP LV L + + V EY+ G L H+ R+ LP + + + L
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 167
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPE 282
+LH E+ +IYRD K N+LLD + KL+D+G+ K G G++ T+ GT Y APE
Sbjct: 168 YLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPE 223
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
+ D + GV++ EM+ G D
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 117
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 118 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 171
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 215
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 216 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 37 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 149
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT---YGYAAP 281
S K ++RD A N +LD + K++DFGLA+ D + G + A
Sbjct: 150 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK-- 339
E + T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEY 261
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 262 CPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 29 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 141
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT---YGYAAP 281
S K ++RD A N +LD + K++DFGLA+ D + G + A
Sbjct: 142 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK-- 339
E + T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEY 253
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 254 CPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 34 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 146
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT---YGYAAP 281
S K ++RD A N +LD + K++DFGLA+ D + G + A
Sbjct: 147 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK-- 339
E + T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEY 258
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 259 CPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E++ L F HP+++KL +V EY+ G L +++ + G + + RL
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE-KESRRLFQQ 124
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
I + D H V++RD K N+LLD NAK++DFGL+ + + G
Sbjct: 125 ILSGVDYCHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRXSCG 177
Query: 275 TYGYAAPEYVATGHLYV--KSDVYGFGVVLLEMLTGLRALDTN 315
+ YAAPE V +G LY + D++ GV+L +L G D +
Sbjct: 178 SPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 105 TMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
+ LG+G FG V + L S PD R++Q E++ L
Sbjct: 29 SQLGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHS 83
Query: 165 PNLVKLIGYCW-EDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+VK G + RQ L LV EY+ G L + L R + L + L + K +
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGME 141
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI-MGTYGYAAP 281
+L S + ++RD A NIL++ + K++DFGLAKL P+D + +V + AP
Sbjct: 142 YLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLT 307
E ++ +SDV+ FGVVL E+ T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+HP LV L + + V EY+ G L H+ R+ LP + + + L
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 135
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPE 282
+LH E+ +IYRD K N+LLD + KL+D+G+ K G G++ T+ GT Y APE
Sbjct: 136 YLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPE 191
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDT 314
+ D + GV++ EM+ G D
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 120 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCG 173
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 217
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 218 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
++G G FG V+ H TL + I + ++ E + FSHP
Sbjct: 56 VIGRGHFGCVY-----HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
N++ L+G C L+V YM+ G L N + R + P + + AK + +L
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTV-KDLIGFGLQVAKGMKYL 168
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT---YGYAAP 281
S K ++RD A N +LD + K++DFGLA+ D + G + A
Sbjct: 169 AS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK-- 339
E + T KSDV+ FGV+L E++T P + D L +R L+
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEY 280
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
DP E +++KC + + RPS E++ + I
Sbjct: 281 CPDPLYE-------------VMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 115
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 116 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAP----SSRRTTLSG 169
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 213
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 214 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 118
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 119 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 172
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 216
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 217 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRL 211
+EV L + HPN+V+ + + +V EY + G L + + KG+ E +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 212 KIAIDAAKDLTFLHSSEKS-----VIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS 266
+ + L +S V++RD K +N+ LDG N KL DFGLA++ ++ ++
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDT 170
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDF 326
+GT Y +PE + KSD++ G +L E+ + F
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-----------F 219
Query: 327 ARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
++ L K R K + P + + +II + L + +RPS+EE+LE
Sbjct: 220 SQKELAGKIREGKF------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 115
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 116 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCG 169
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 213
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 214 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 114
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 115 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCG 168
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 212
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 213 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+HP LV L + + V EY+ G L H+ R+ LP + + + L
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 124
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPE 282
+LH E+ +IYRD K N+LLD + KL+D+G+ K G G++ T+ GT Y APE
Sbjct: 125 YLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPE 180
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDT 314
+ D + GV++ EM+ G D
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 129/315 (40%), Gaps = 52/315 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
KN LGEG FG+V K H ++P LR+ +E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE---LRDLLSEFNV 79
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEP-------------- 204
L + +HP+++KL G C +D LL+ EY + GSL L P
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 205 -------LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA 257
L + A ++ + +L +E +++RD A NIL+ K+SDFGL+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 258 KLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLY-----VKSDVYGFGVVLLEMLTGLRAL 312
+ + +S+V + G +++A L+ +SDV+ FGV+L E++T L
Sbjct: 198 R-DVYEEDSYVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----L 248
Query: 313 DTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNR 372
N G RL ++ + P + +++++C + EP R
Sbjct: 249 GGNPYPG------------IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
Query: 373 PSMEEVLETLQNISV 387
P ++ + L+ + V
Sbjct: 297 PVFADISKDLEKMMV 311
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 182 LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI 241
+V EY+ +L + + +G P+ +++ DA + L F H + +I+RD K +NI
Sbjct: 110 IVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSH--QNGIIHRDVKPANI 164
Query: 242 LLDGSYNAKLSDFGLAKLGPIDGNSHV-TTRIMGTYGYAAPEYVATGHLYVKSDVYGFGV 300
++ + K+ DFG+A+ GNS T ++GT Y +PE + +SDVY G
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 224
Query: 301 VLLEMLTGLRALDTNRPSG---EHVLVDFARPS 330
VL E+LTG + P +HV D PS
Sbjct: 225 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 257
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRL 211
+EV L + HPN+V+ + + +V EY + G L + + KG+ E +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 212 KIAIDAAKDLTFLHSSEKS-----VIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS 266
+ + L +S V++RD K +N+ LDG N KL DFGLA++ ++ ++
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDT 170
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDF 326
+GT Y +PE + KSD++ G +L E+ + F
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-----------F 219
Query: 327 ARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
++ L K R K + P + + +II + L + +RPS+EE+LE
Sbjct: 220 SQKELAGKIREGKF------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 117
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 118 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 171
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 215
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 216 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 114
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 115 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTXLCG 168
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 212
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 213 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+HP LV L + + V EY+ G L H+ R+ LP + + + L
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 120
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPE 282
+LH E+ +IYRD K N+LLD + KL+D+G+ K G G++ T+ GT Y APE
Sbjct: 121 YLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPE 176
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLTGLRALDT 314
+ D + GV++ EM+ G D
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRL 211
+EV L + HPN+V+ + + +V EY + G L + + KG+ E +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 212 KIAIDAAKDLTFLHSSEKS-----VIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS 266
+ + L +S V++RD K +N+ LDG N KL DFGLA++ ++ +
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDE 170
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDF 326
+GT Y +PE + KSD++ G +L E+ + F
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-----------F 219
Query: 327 ARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
++ L K R K + P + + +II + L + +RPS+EE+LE
Sbjct: 220 SQKELAGKIREGKF------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 119/290 (41%), Gaps = 32/290 (11%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG FG+VF + L P D+ + +++ E + L H +
Sbjct: 21 LGEGAFGKVFLA--ECYNLCPEQDKILVAVKTLKDASDNAR--KDFHREAELLTNLQHEH 76
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-----AE-----PLPWNTRLKIAID 216
+VK G C E ++V+EYM+ G L L G AE L + L IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY 276
A + +L S + ++RD N L+ + K+ DFG+++ V M
Sbjct: 137 IAAGMVYLAS--QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 277 GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRR 336
+ PE + +SDV+ GVVL E+ T + + E + +T R
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI------ECITQGRV 248
Query: 337 LKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
L++ PR Q ++++ C + EP R +++ + LQN++
Sbjct: 249 LQR---PRTCPQE-------VYELMLGCWQREPHMRKNIKGIHTLLQNLA 288
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 113
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 114 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 167
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 211
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 212 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 37/276 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G FG V+KG +D+ T D Q E+ L + P
Sbjct: 27 IGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDI-------QQEITVLSQCDSPY 78
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+ + G + + ++ EY+ GS + L + G E T L+ + K L +LHS
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILR---EILKGLDYLHS 134
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
K I+RD KA+N+LL + KL+DFG+A G + +GT + APE +
Sbjct: 135 ERK--IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 287 GHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLE 346
K+D++ G+ +E+ G P L+ P P LE
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTLE 237
Query: 347 EQY--PIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
Q+ P K + + CL +P+ RP+ +E+L+
Sbjct: 238 GQHSKPFK------EFVEACLNKDPRFRPTAKELLK 267
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 114
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 115 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCG 168
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 212
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 213 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY +G + L + + T +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI--- 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 120 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLXG 173
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 217
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 218 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E++ L + + P +V G + D + + E+M GSL+ L A+ +P K++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KEAKRIPEEILGKVS 120
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIM 273
I + L +L + +++RD K SNIL++ KL DFG++ +L NS V
Sbjct: 121 IAVLRGLAYLREKHQ-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV----- 174
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
GT Y APE + H V+SD++ G+ L+E+ G + P + + F RP +
Sbjct: 175 GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPP--PDAKELEAIFGRPVV 230
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-- 112
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 113 -ELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCG 165
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 209
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 210 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
R++ E +G+F HPN+V L G + ++V E+M+ G+L+ L + +
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV 148
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS-HV 268
+ I A + ++ ++RD A NIL++ + K+SDFGL+++ D + +
Sbjct: 149 GMLRGIAAG----MRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 269 TTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
TT + APE + SDV+ +G+V+ E+++ GE D
Sbjct: 205 TTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS----------YGERPYWD--- 251
Query: 329 PSLTDKRRLKKIMDPRLEEQY----PIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++++ +K I EE Y P+ Q+++ C + E RP E+++ L
Sbjct: 252 --MSNQDVIKAI-----EEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDK 304
Query: 385 I 385
+
Sbjct: 305 M 305
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 128/315 (40%), Gaps = 52/315 (16%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
KN LGEG FG+V K H ++P LR+ +E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE---LRDLLSEFNV 79
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEP-------------- 204
L + +HP+++KL G C +D LL+ EY + GSL L P
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 205 -------LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA 257
L + A ++ + +L +E +++RD A NIL+ K+SDFGL+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 258 KLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLY-----VKSDVYGFGVVLLEMLTGLRAL 312
+ + +S V + G +++A L+ +SDV+ FGV+L E++T L
Sbjct: 198 R-DVYEEDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----L 248
Query: 313 DTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNR 372
N G RL ++ + P + +++++C + EP R
Sbjct: 249 GGNPYPG------------IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
Query: 373 PSMEEVLETLQNISV 387
P ++ + L+ + V
Sbjct: 297 PVFADISKDLEKMMV 311
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 142 NPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS 201
N S+Q L EV+ + +HPN+VKL ++ LV EY G + ++L G
Sbjct: 53 NSSSLQKLFR---EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
+ + + + A + + +K +++RD KA N+LLD N K++DFG +
Sbjct: 110 MKEKEARAKFRQIVSAVQ-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
GN T G+ YAAPE + G Y + DV+ GV+L +++G D
Sbjct: 165 F-GNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 111/240 (46%), Gaps = 25/240 (10%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
R++ +E +G+F HPN++ L G + +++ E+M+ GSL++ L + +
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 112
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
+ I A + ++ + ++R A NIL++ + K+SDFGL++ D +
Sbjct: 113 GMLRGIAAGMK----YLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 270 TRIMG---TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDF 326
T +G + APE + SDV+ +G+V+ E+++ GE D
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS----------YGERPYWD- 217
Query: 327 ARPSLTDKRRLKKI-MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
+T++ + I D RL AL Q+++ C + + +RP +++ TL +
Sbjct: 218 ----MTNQDVINAIEQDYRLPPPMDCPSAL--HQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 142 NPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS 201
N S+Q L EV+ + +HPN+VKL ++ LV EY G + ++L G
Sbjct: 53 NSSSLQKLFR---EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
+ + + + A + + +K +++RD KA N+LLD N K++DFG +
Sbjct: 110 MKEKEARAKFRQIVSAVQ-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
GN T G+ YAAPE + G Y + DV+ GV+L +++G D
Sbjct: 165 F-GNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 142 NPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS 201
N S+Q L EV+ + +HPN+VKL ++ LV EY G + ++L G
Sbjct: 53 NSSSLQKLFR---EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
+ + + + A + + +K +++RD KA N+LLD N K++DFG +
Sbjct: 110 MKEKEARAKFRQIVSAVQ-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
GN T G+ YAAPE + G Y + DV+ GV+L +++G D
Sbjct: 165 F-GNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 140
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 141 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDDLCG 194
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 238
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 239 ETYKRIS--RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 116
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K+++FG + P S T + G
Sbjct: 117 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSRRTTLCG 170
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 214
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 215 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 165 PNLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKIAIDAAKDL 221
P + + C++ DR + V EY+ G L H+ + G EP +IAI L
Sbjct: 401 PPFLTQLHSCFQTMDRLYF-VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----L 455
Query: 222 TFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR-IMGTYGYAA 280
FL S K +IYRD K N++LD + K++DFG+ K DG VTT+ GT Y A
Sbjct: 456 FFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIA 510
Query: 281 PEYVATGHLYVKSDVYGFGVVLLEMLTG 308
PE +A D + FGV+L EML G
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAG 538
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V +G ++ D+ + +RE Q + +
Sbjct: 341 DIELGCGNFGSVRQG--VYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ----IMHQLD 394
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V+LIG C + +LV E G L H F G E +P + ++ + + +
Sbjct: 395 NPYIVRLIGVC-QAEALMLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVSMGMKY 451
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY--GYAAP 281
L EK+ ++R+ A N+LL + AK+SDFGL+K D +S+ T R G + + AP
Sbjct: 452 LE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAP 508
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLT 307
E + +SDV+ +GV + E L+
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 116
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 117 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCG 170
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 214
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 215 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 31/219 (14%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH- 164
++GEG FG+V K + L S D R++ E++ L K H
Sbjct: 32 VIGEGNFGQVLKARIKKDGL--RMDAAIKRMKEYASKDDH----RDFAGELEVLCKLGHH 85
Query: 165 PNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRK-------------GSAEPLPWNTR 210
PN++ L+G C E R +L L EY G+L + L + +A L
Sbjct: 86 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
L A D A+ + +L S+K I+RD A NIL+ +Y AK++DFGL++ G
Sbjct: 145 LHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVK 197
Query: 271 RIMGTYG--YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ MG + A E + SDV+ +GV+L E+++
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 117
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 118 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCG 171
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 215
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 216 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 142 NPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS 201
N S+Q L EV+ + +HPN+VKL ++ LV EY G + ++L G
Sbjct: 53 NSSSLQKLFR---EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
+ + + + A + + +K +++RD KA N+LLD N K++DFG +
Sbjct: 110 MKEKEARAKFRQIVSAVQ-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
GN G+ YAAPE + G Y + DV+ GV+L +++G D
Sbjct: 165 F-GNK--LDEFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 28 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 87
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 88 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 144
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 145 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 202
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ G M + PE G K+D + FGV+L E+ + L
Sbjct: 203 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 261
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 262 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 306
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 307 RPNFAIILERIE 318
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH- 164
++GEG FG+V K + L S D R++ E++ L K H
Sbjct: 22 VIGEGNFGQVLKARIKKDGL--RMDAAIKRMKEYASKDDH----RDFAGELEVLCKLGHH 75
Query: 165 PNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
PN++ L+G C E R +L L EY G+L + L +A L
Sbjct: 76 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
L A D A+ + +L S+K I+RD A NIL+ +Y AK++DFGL++ G
Sbjct: 135 LHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVK 187
Query: 271 RIMGTYG--YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ MG + A E + SDV+ +GV+L E+++
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 88/215 (40%), Gaps = 14/215 (6%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
R F +LG+G FG+V V K + + L
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTL----T 197
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI- 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFY 253
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ L +LHS EK+V+YRD K N++LD + K++DFGL K G DG + T
Sbjct: 254 GAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FC 310
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 117
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K+++FG + P S T + G
Sbjct: 118 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSRRTTLCG 171
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 215
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 216 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
+A +F +LG+G FG+VF + K P + +R +
Sbjct: 24 KADPSHFELLKVLGQGSFGKVF---LVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KM 79
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E L +HP +VKL + + L+ ++++ G L F + S E + +K
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 135
Query: 215 I-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ + A L LHS +IYRD K NILLD + KL+DFGL+K ID +
Sbjct: 136 LAELALGLDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYS-FC 191
Query: 274 GTYGYAAPEYV-ATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE V GH + +D + +GV++ EMLTG
Sbjct: 192 GTVEYMAPEVVNRQGHSH-SADWWSYGVLMFEMLTG 226
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 88/215 (40%), Gaps = 14/215 (6%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
R F +LG+G FG+V V K + + L
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTL----T 200
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI- 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFY 256
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ L +LHS EK+V+YRD K N++LD + K++DFGL K G DG + T
Sbjct: 257 GAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FC 313
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 115
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 116 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDTLCG 169
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 213
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 214 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
+A F +LG+G FG+VF K ++ + ++ +
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLV----KKISGSDARQLYAMKVLKKATLKVRDRVRTKM 76
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E L + +HP +VKL + + L+ ++++ G L F + S E + +K
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 132
Query: 215 I-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ + A L LHS +IYRD K NILLD + KL+DFGL+K ID +
Sbjct: 133 LAELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYS-FC 188
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE V +D + FGV++ EMLTG
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 51 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 110
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 111 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 167
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 168 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 225
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ G M + PE G K+D + FGV+L E+ + L
Sbjct: 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 284
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 285 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 329
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 330 RPNFAIILERIE 341
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPD--SIQGLREWQAEVKFLGKFSH 164
+GEG +G+VFK + L + + + +RE A ++ L F H
Sbjct: 19 IGEGAYGKVFKA----RDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEH 73
Query: 165 PNLVKLIGYCWEDR-----QFLLVYEYMQKGSLENHLFRKGSAEP-LPWNTRLKIAIDAA 218
PN+V+L C R + LV+E++ + L +L EP +P T +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLL 130
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
+ L FLHS V++RD K NIL+ S KL+DFGLA+ I T ++ T Y
Sbjct: 131 RGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWY 185
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEML 306
APE + D++ G + EM
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E+ E K + SH LV+L G C + R ++ EYM G L N+L +
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQL 122
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
L++ D + + +L S K ++RD A N L++ K+SDFGL++ +D +
Sbjct: 123 LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEETSSV 179
Query: 271 RIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALD--TNRPSGEHVL--VD 325
++ PE + KSD++ FGV++ E+ + G + TN + EH+ +
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 239
Query: 326 FARPSLTDKR 335
RP L ++
Sbjct: 240 LYRPHLASEK 249
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 105 TMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
+ LG+G FG V + L S PD R++Q E++ L
Sbjct: 13 SQLGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHS 67
Query: 165 PNLVKLIGYCWED--RQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+VK G + + LV EY+ G L + L R + L + L + K +
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGME 125
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI-MGTYGYAAP 281
+L S + ++RD A NIL++ + K++DFGLAKL P+D + V + AP
Sbjct: 126 YLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLT 307
E ++ +SDV+ FGVVL E+ T
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 38/204 (18%)
Query: 146 IQGLREWQAEVKFLGK--FSHPNLVKLIGYCWEDR------QFLLVYEYMQKGSLENHLF 197
+Q + WQ+E + H NL++ I E R + L+ + KGSL ++L
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAA--EKRGSNLEVELWLITAFHDKGSLTDYL- 104
Query: 198 RKGSAEPLPWNTRLKIAIDAAKDLTFLHSS---------EKSVIYRDFKASNILLDGSYN 248
KG+ + WN +A ++ L++LH + S+ +RDFK+ N+LL
Sbjct: 105 -KGNI--ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLT 161
Query: 249 AKLSDFGLA---KLGPIDGNSHVTTRIMGTYGYAAPEYVATGHL------YVKSDVYGFG 299
A L+DFGLA + G G++H +GT Y APE V G + +++ D+Y G
Sbjct: 162 AVLADFGLAVRFEPGKPPGDTHGQ---VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMG 217
Query: 300 VVLLEMLTGLRALDTNRPSGEHVL 323
+VL E+++ +A D P E++L
Sbjct: 218 LVLWELVSRCKAADG--PVDEYML 239
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
+A F +LG+G FG+VF K ++ + ++ +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLV----KKISGSDARQLYAMKVLKKATLKVRDRVRTKM 75
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E L + +HP +VKL + + L+ ++++ G L F + S E + +K
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 131
Query: 215 I-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ + A L LHS +IYRD K NILLD + KL+DFGL+K ID +
Sbjct: 132 LAELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYS-FC 187
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE V +D + FGV++ EMLTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG FG+V K +KT S+ +R + E+ +L HP+
Sbjct: 17 LGEGSFGKV-KLATHYKTQQKVALKFISRQLLKKSD----MHMR-VEREISYLKLLRHPH 70
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
++KL ++V EY G L +++ K + I A + +
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIE-----YC 124
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+++RD K N+LLD + N K++DFGL+ + DGN T+ G+ YAAPE V
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTS--CGSPNYAAPE-VIN 180
Query: 287 GHLYV--KSDVYGFGVVLLEMLTGLRALD--------TNRPSGEHVLVDFARPSLTDKRR 336
G LY + DV+ G+VL ML G D S +V+ DF P R
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIR 240
Query: 337 LKKIMDP 343
+ DP
Sbjct: 241 RMIVADP 247
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 114
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 115 TELANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCG 168
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 212
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 213 DTYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 114
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 115 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCG 168
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 212
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 213 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
+A F +LG+G FG+VF K ++ + ++ +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLV----KKISGSDARQLYAMKVLKKATLKVRDRVRTKM 75
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E L + +HP +VKL + + L+ ++++ G L F + S E + +K
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 131
Query: 215 I-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ + A L LHS +IYRD K NILLD + KL+DFGL+K ID +
Sbjct: 132 LAELALALDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYS-FC 187
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE V +D + FGV++ EMLTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 114
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 115 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCG 168
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 212
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 213 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPD--SIQGLREWQAEVKFLGKFSH 164
+GEG +G+VFK + L + + + +RE A ++ L F H
Sbjct: 19 IGEGAYGKVFKA----RDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEH 73
Query: 165 PNLVKLIGYCWEDR-----QFLLVYEYMQKGSLENHLFRKGSAEP-LPWNTRLKIAIDAA 218
PN+V+L C R + LV+E++ + L +L EP +P T +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLL 130
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
+ L FLHS V++RD K NIL+ S KL+DFGLA+ I T ++ T Y
Sbjct: 131 RGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWY 185
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEML 306
APE + D++ G + EM
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 117
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 118 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCG 171
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 215
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 216 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E+ E K + SH LV+L G C + R ++ EYM G L N+L +
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQL 122
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVT 269
L++ D + + +L S K ++RD A N L++ K+SDFGL++ D S V
Sbjct: 123 LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALD--TNRPSGEHVL--V 324
++ ++ PE + KSD++ FGV++ E+ + G + TN + EH+ +
Sbjct: 181 SKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
Query: 325 DFARPSLTDKR 335
RP L ++
Sbjct: 239 RLYRPHLASEK 249
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI--- 117
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 118 TELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDDLCG 171
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G + N T +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN----------------TYQ 215
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
K+I R+E +P A +I + L+ P RP + EVLE
Sbjct: 216 ETYKRI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E+ E K + SH LV+L G C + R ++ EYM G L N+L +
Sbjct: 45 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQL 102
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVT 269
L++ D + + +L S K ++RD A N L++ K+SDFGL++ D S V
Sbjct: 103 LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALD--TNRPSGEHVL--V 324
++ ++ PE + KSD++ FGV++ E+ + G + TN + EH+ +
Sbjct: 161 SKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 218
Query: 325 DFARPSLTDKR 335
RP L ++
Sbjct: 219 RLYRPHLASEK 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 142 NPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS 201
N S+Q L EV+ + +HPN+VKL ++ LV EY G + ++L G
Sbjct: 46 NSSSLQKLFR---EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW 102
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
+ + + + A + + +K +++RD KA N+LLD N K++DFG +
Sbjct: 103 MKEKEARAKFRQIVSAVQ-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 157
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
GN T G+ YAAPE + G Y + DV+ GV+L +++G D
Sbjct: 158 F-GNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPD--SIQGLREWQAEVKFLGKFSH 164
+GEG +G+VFK + L + + + +RE A ++ L F H
Sbjct: 19 IGEGAYGKVFKA----RDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEH 73
Query: 165 PNLVKLIGYCWEDR-----QFLLVYEYMQKGSLENHLFRKGSAEP-LPWNTRLKIAIDAA 218
PN+V+L C R + LV+E++ + L +L EP +P T +
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLL 130
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
+ L FLHS V++RD K NIL+ S KL+DFGLA+ I T ++ T Y
Sbjct: 131 RGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWY 185
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEML 306
APE + D++ G + EM
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 94 LRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQ 153
++ ++F MLG+G FG+VF + K + D + E
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLA--EFKKTNQFFAIKALKKDVVLMDDDVECTMVE-- 68
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
V L + HP L + V EY+ G L H+ S +
Sbjct: 69 KRVLSLA-WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFY 124
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A + L FLHS K ++YRD K NILLD + K++DFG+ K + G++ T
Sbjct: 125 AAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENML-GDAK-TNEFC 180
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
GT Y APE + G Y S D + FGV+L EML G
Sbjct: 181 GTPDYIAPE-ILLGQKYNHSVDWWSFGVLLYEMLIG 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 142 NPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS 201
N S+Q L EV+ + +HPN+VKL ++ LV EY G + ++L G
Sbjct: 53 NSSSLQKLFR---EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR 109
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
+ + + + A + + +K +++RD KA N+LLD N K++DFG +
Sbjct: 110 MKEKEARAKFRQIVSAVQ-----YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
GN G YAAPE + G Y + DV+ GV+L +++G D
Sbjct: 165 F-GNK--LDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E+ E K + SH LV+L G C + R ++ EYM G L N+L +
Sbjct: 49 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQL 106
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVT 269
L++ D + + +L S K ++RD A N L++ K+SDFGL++ D S V
Sbjct: 107 LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 164
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALD--TNRPSGEHVL--V 324
++ ++ PE + KSD++ FGV++ E+ + G + TN + EH+ +
Sbjct: 165 SKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 222
Query: 325 DFARPSLTDKR 335
RP L ++
Sbjct: 223 RLYRPHLASEK 233
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 121/307 (39%), Gaps = 59/307 (19%)
Query: 100 NFRPDTMLGEGGFGRVF--KGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVK 157
+F P LG GGFG VF K VD A P+ + EVK
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYA----------IKRIRLPNRELAREKVMREVK 55
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFL--------LVYEYMQ-----KGSLENHLFRKGSAEP 204
L K HP +V+ W ++ VY Y+Q K +L++ + + + E
Sbjct: 56 ALAKLEHPGIVRYFN-AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114
Query: 205 LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK------ 258
+ L I + A+ + FLHS K +++RD K SNI K+ DFGL
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 259 -----LGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
L P+ + T ++ GT Y +PE + K D++ G++L E+L
Sbjct: 173 EEQTVLTPMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFST-- 229
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
E V +LTD R LK P ++YP + ++ L P RP
Sbjct: 230 ----QMERVR------TLTDVRNLK--FPPLFTQKYPCEYVMVQDM-----LSPSPMERP 272
Query: 374 SMEEVLE 380
++E
Sbjct: 273 EAINIIE 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG+V+K S + L ++ E++ L HP
Sbjct: 19 LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR--KGSAEPLPWNTRLKIAI-DAAKDLTF 223
+VKL+G + D + ++ E+ G+++ + +G EP ++++ + L F
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-----QIQVVCRQMLEALNF 124
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR---IMGTYGYAA 280
LHS K +I+RD KA N+L+ + +L+DFG++ N + +GT + A
Sbjct: 125 LHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSA-----KNLKTLQKRDSFIGTPYWMA 177
Query: 281 PEYVATGHLY-----VKSDVYGFGVVLLEM 305
PE V + K+D++ G+ L+EM
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 165 PNLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKIAIDAAKDL 221
P + + C++ DR + V EY+ G L H+ + G EP +IAI L
Sbjct: 80 PPFLTQLHSCFQTMDRLYF-VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----L 134
Query: 222 TFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR-IMGTYGYAA 280
FL S K +IYRD K N++LD + K++DFG+ K DG VTT+ GT Y A
Sbjct: 135 FFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIA 189
Query: 281 PEYVATGHLYVKSDVYGFGVVLLEMLTG 308
PE +A D + FGV+L EML G
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG+V+K S + L ++ E++ L HP
Sbjct: 27 LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR--KGSAEPLPWNTRLKIAI-DAAKDLTF 223
+VKL+G + D + ++ E+ G+++ + +G EP ++++ + L F
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-----QIQVVCRQMLEALNF 132
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR---IMGTYGYAA 280
LHS K +I+RD KA N+L+ + +L+DFG++ N + +GT + A
Sbjct: 133 LHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSA-----KNLKTLQKRDSFIGTPYWMA 185
Query: 281 PEYVATGHLY-----VKSDVYGFGVVLLEM 305
PE V + K+D++ G+ L+EM
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 163 SHPNLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI-AIDAAK 219
+HP L +L C++ DR F V E++ G L H+ + + R + A +
Sbjct: 82 NHPFLTQLFC-CFQTPDRLFF-VMEFVNGGDLMFHIQKSRRFD----EARARFYAAEIIS 135
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
L FLH +K +IYRD K N+LLD + KL+DFG+ K G +G + T GT Y
Sbjct: 136 ALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYI 191
Query: 280 APEYVATGHLYVKSDVYGFGVVLLEMLTG 308
APE + D + GV+L EML G
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 88/217 (40%), Gaps = 14/217 (6%)
Query: 93 DLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
D R F +LG+G FG+V V K + + L
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTL--- 58
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E + L HP L L + V EY G L HL S E + R +
Sbjct: 59 -TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRAR 113
Query: 213 I-AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+ L +LHS EK+V+YRD K N++LD + K++DFGL K G DG +
Sbjct: 114 FYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKX 170
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 105 TMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
MLG+G FG V K + N D+ LRE V+ L K H
Sbjct: 28 CMLGKGSFGEVLKC---KDRITQQEYAVKVINKASAKNKDTSTILRE----VELLKKLDH 80
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
PN++KL + F +V E G L + + ++ + + +I +T++
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYM 137
Query: 225 HSSEKSVIYRDFKASNILLDGS---YNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
H + ++++RD K NILL+ + K+ DFGL+ N+ + RI GT Y AP
Sbjct: 138 H--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAP 192
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTG 308
E V G K DV+ GV+L +L+G
Sbjct: 193 E-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E+ E K + SH LV+L G C + R ++ EYM G L N+L +
Sbjct: 50 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQL 107
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVT 269
L++ D + + +L S K ++RD A N L++ K+SDFGL++ D S V
Sbjct: 108 LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 165
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALD--TNRPSGEHVL--V 324
++ ++ PE + KSD++ FGV++ E+ + G + TN + EH+ +
Sbjct: 166 SKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 325 DFARPSLTDKR 335
RP L ++
Sbjct: 224 RLYRPHLASEK 234
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E+ E K + SH LV+L G C + R ++ EYM G L N+L +
Sbjct: 56 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQL 113
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG-NSHVT 269
L++ D + + +L S K ++RD A N L++ K+SDFGL++ D S V
Sbjct: 114 LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 171
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALD--TNRPSGEHVL--V 324
++ ++ PE + KSD++ FGV++ E+ + G + TN + EH+ +
Sbjct: 172 SKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 229
Query: 325 DFARPSLTDKR 335
RP L ++
Sbjct: 230 RLYRPHLASEK 240
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 33/251 (13%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 76 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 134
Query: 208 NT-------------RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDF 254
T + + AK + FL S + I+RD A NILL K+ DF
Sbjct: 135 KTPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDF 192
Query: 255 GLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDT 314
GLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGA 248
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPS 374
+ G + +F R L + R++ D E Y Q ++ C EP RP+
Sbjct: 249 SPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRPT 297
Query: 375 MEEVLETLQNI 385
E++E L N+
Sbjct: 298 FSELVEHLGNL 308
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 28/231 (12%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVK 157
+N +LG G FG+V ++ T DS + RE +E+K
Sbjct: 45 ENLEFGKVLGSGAFGKVMNA--TAYGISKTGVSIQVAVKMLKEKADSSE--REALMSELK 100
Query: 158 FLGKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL------FRKGSAE------- 203
+ + SH N+V L+G C L++EY G L N+L F + E
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 204 -------PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGL 256
L + L A AK + FL KS ++RD A N+L+ K+ DFGL
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 257 AKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
A+ D N V + APE + G +KSDV+ +G++L E+ +
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 16/202 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G FG VFKG +D++T D Q E+ L +
Sbjct: 31 IGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDI-------QQEITVLSQCDSSY 82
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+ K G + + ++ EY+ GS + L R G + T LK + K L +LHS
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLK---EILKGLDYLHS 138
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+K I+RD KA+N+LL + KL+DFG+A G + +GT + APE +
Sbjct: 139 EKK--IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 287 GHLYVKSDVYGFGVVLLEMLTG 308
K+D++ G+ +E+ G
Sbjct: 195 SAYDSKADIWSLGITAIELAKG 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E+ E K + SH LV+L G C + R ++ EYM G L N+L +
Sbjct: 50 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQL 107
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
L++ D + + +L S K ++RD A N L++ K+SDFGL++ + + + ++
Sbjct: 108 LEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS 163
Query: 271 RIMGT---YGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALD--TNRPSGEHVL- 323
R G+ ++ PE + KSD++ FGV++ E+ + G + TN + EH+
Sbjct: 164 R--GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
Query: 324 -VDFARPSLTDKR 335
+ RP L ++
Sbjct: 222 GLRLYRPHLASEK 234
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH- 164
++GEG FG+V K + L S D R++ E++ L K H
Sbjct: 29 VIGEGNFGQVLKARIKKDGL--RMDAAIKRMKEYASKDDH----RDFAGELEVLCKLGHH 82
Query: 165 PNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
PN++ L+G C E R +L L EY G+L + L +A L
Sbjct: 83 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
L A D A+ + +L S+K I+R+ A NIL+ +Y AK++DFGL++ G
Sbjct: 142 LHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR-----GQEVYVK 194
Query: 271 RIMGTYG--YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ MG + A E + SDV+ +GV+L E+++
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 127/298 (42%), Gaps = 43/298 (14%)
Query: 76 SSGEIVTPNYLKMFTLQDLRAATKNFRPDTM------LGEGGFGRVFKGWVDHKTLAPTX 129
SSG + L +++ T++ P+ LG+G FG+V+K ++
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 130 XXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQK 189
+ S + L ++ E+ L HPN+VKL+ + + ++ E+
Sbjct: 68 KVI---------DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 190 GSLENHLFRKGSAEPLPWNTRLKIAIDAAKD-LTFLHSSEKSVIYRDFKASNILLDGSYN 248
G+++ + PL +++++ D L +LH ++ +I+RD KA NIL +
Sbjct: 119 GAVDAVMLE--LERPLT-ESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGD 173
Query: 249 AKLSDFGLAKLGPIDGNSHVTTR---IMGTYGYAAPEYVATGH-----LYVKSDVYGFGV 300
KL+DFG++ N+ R +GT + APE V K+DV+ G+
Sbjct: 174 IKLADFGVSA-----KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 301 VLLEM---------LTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQY 349
L+EM L +R L S L +R S K LKK ++ ++ ++
Sbjct: 229 TLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARW 286
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 127/298 (42%), Gaps = 43/298 (14%)
Query: 76 SSGEIVTPNYLKMFTLQDLRAATKNFRPDTM------LGEGGFGRVFKGWVDHKTLAPTX 129
SSG + L +++ T++ P+ LG+G FG+V+K ++
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 130 XXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQK 189
+ S + L ++ E+ L HPN+VKL+ + + ++ E+
Sbjct: 68 KVI---------DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 190 GSLENHLFRKGSAEPLPWNTRLKIAIDAAKD-LTFLHSSEKSVIYRDFKASNILLDGSYN 248
G+++ + PL +++++ D L +LH ++ +I+RD KA NIL +
Sbjct: 119 GAVDAVMLE--LERPLT-ESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGD 173
Query: 249 AKLSDFGLAKLGPIDGNSHVTTR---IMGTYGYAAPEYVATGH-----LYVKSDVYGFGV 300
KL+DFG++ N+ R +GT + APE V K+DV+ G+
Sbjct: 174 IKLADFGVSA-----KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 301 VLLEM---------LTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQY 349
L+EM L +R L S L +R S K LKK ++ ++ ++
Sbjct: 229 TLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARW 286
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 127/298 (42%), Gaps = 43/298 (14%)
Query: 76 SSGEIVTPNYLKMFTLQDLRAATKNFRPDTM------LGEGGFGRVFKGWVDHKTLAPTX 129
SSG + L +++ T++ P+ LG+G FG+V+K ++
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 130 XXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQK 189
+ S + L ++ E+ L HPN+VKL+ + + ++ E+
Sbjct: 68 KVI---------DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 190 GSLENHLFRKGSAEPLPWNTRLKIAIDAAKD-LTFLHSSEKSVIYRDFKASNILLDGSYN 248
G+++ + PL +++++ D L +LH ++ +I+RD KA NIL +
Sbjct: 119 GAVDAVMLE--LERPLT-ESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGD 173
Query: 249 AKLSDFGLAKLGPIDGNSHVTTR---IMGTYGYAAPEYVATGH-----LYVKSDVYGFGV 300
KL+DFG++ N+ R +GT + APE V K+DV+ G+
Sbjct: 174 IKLADFGVSA-----KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 301 VLLEM---------LTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQY 349
L+EM L +R L S L +R S K LKK ++ ++ ++
Sbjct: 229 TLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARW 286
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGL-----RE 151
AT + P +G G +G V+K H P+ +GL RE
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHS--------GHFVALKSVRVPNGEEGLPISTVRE 53
Query: 152 WQAEVKFLGKFSHPNLVKLIGYCWEDR-----QFLLVYEYMQKGSLENHLFRKGSAEPLP 206
A ++ L F HPN+V+L+ C R + LV+E++ + L +L K LP
Sbjct: 54 -VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLP 110
Query: 207 WNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS 266
T + + L FLH++ +++RD K NIL+ KL+DFGLA+ I
Sbjct: 111 AETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQ 165
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEML 306
++ T Y APE + D++ G + EM
Sbjct: 166 MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 92/216 (42%), Gaps = 15/216 (6%)
Query: 95 RAATKN-FRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQ 153
+ TKN FR +LG+GGFG V V + L E Q
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQV--RATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
K +F V + Y +E + L LV M G L+ H++ G A P +
Sbjct: 237 ILEKVNSRF-----VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVF 290
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
A + L LH + ++YRD K NILLD + ++SD GLA P +G + + R+
Sbjct: 291 YAAEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQT-IKGRV 346
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY APE V D + G +L EM+ G
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
R +LG G FG V KG W+ S S Q + + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGE--SIKIPVCIKVIEDKSGRQSFQAVTD---HMLA 86
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDA 217
+G H ++V+L+G C LV +Y+ GSL +H+ + +G+ P L +
Sbjct: 87 IGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP---QLLLNWGVQI 142
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
AK + +L E +++R+ A N+LL +++DFG+A L P D + +
Sbjct: 143 AKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + G +SDV+ +GV + E++T
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 87/215 (40%), Gaps = 14/215 (6%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
R F +LG+G FG+V V K + + L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTL----T 58
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI- 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFY 114
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ L +LHS EK+V+YRD K N++LD + K++DFGL K G DG +
Sbjct: 115 GAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFC 171
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 52/295 (17%)
Query: 96 AATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAE 155
A N++ LGEG FG+V + H T + +QG + E
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKS--DMQG--RIERE 64
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAI 215
+ +L HP+++KL + ++V EY L +++ ++ + I
Sbjct: 65 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
A + + +++RD K N+LLD N K++DFGL+ + DGN T+ G+
Sbjct: 124 SAVE-----YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS--CGS 175
Query: 276 YGYAAPEYVATGHLYV--KSDVYGFGVVLLEMLT--------GLRALDTNRPSGEHVLVD 325
YAAPE V +G LY + DV+ GV+L ML + L N +G + L
Sbjct: 176 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 234
Query: 326 FARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
F P A +I + L P NR S+ E+++
Sbjct: 235 FLSPG--------------------------AAGLIKRMLIVNPLNRISIHEIMQ 263
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 87/215 (40%), Gaps = 14/215 (6%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
R F +LG+G FG+V V K + + L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTL----T 57
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI- 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 58 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFY 113
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ L +LHS EK+V+YRD K N++LD + K++DFGL K G DG +
Sbjct: 114 GAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFC 170
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 92/216 (42%), Gaps = 15/216 (6%)
Query: 95 RAATKN-FRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQ 153
+ TKN FR +LG+GGFG V V + L E Q
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQV--RATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
K +F V + Y +E + L LV M G L+ H++ G A P +
Sbjct: 237 ILEKVNSRF-----VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVF 290
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
A + L LH + ++YRD K NILLD + ++SD GLA P +G + + R+
Sbjct: 291 YAAEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQT-IKGRV 346
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY APE V D + G +L EM+ G
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 105 TMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
MLG+G FG V K + N D+ LRE V+ L K H
Sbjct: 28 CMLGKGSFGEVLKC---KDRITQQEYAVKVINKASAKNKDTSTILRE----VELLKKLDH 80
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
PN++KL + F +V E G L + + ++ + + +I +T++
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYM 137
Query: 225 HSSEKSVIYRDFKASNILLDGS---YNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
H + ++++RD K NILL+ + K+ DFGL+ N+ + RI GT Y AP
Sbjct: 138 H--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAP 192
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTG 308
E V G K DV+ GV+L +L+G
Sbjct: 193 E-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 142 NPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS 201
N S+Q L EV+ +HPN+VKL ++ LV EY G + ++L G
Sbjct: 53 NSSSLQKLFR---EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGR 109
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
+ + + + A + + +K +++RD KA N+LLD N K++DFG +
Sbjct: 110 XKEKEARAKFRQIVSAVQ-----YCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT 164
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALD 313
GN G YAAPE + G Y + DV+ GV+L +++G D
Sbjct: 165 F-GNK--LDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 94 LRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQ 153
++ ++F MLG+G FG+VF + K + D + E
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLA--EFKKTNQFFAIKALKKDVVLMDDDVECTMVE-- 67
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
V L + HP L + V EY+ G L H+ S +
Sbjct: 68 KRVLSLA-WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFY 123
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A + L FLHS K ++YRD K NILLD + K++DFG+ K + G++ T
Sbjct: 124 AAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENML-GDAK-TNXFC 179
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
GT Y APE + G Y S D + FGV+L EML G
Sbjct: 180 GTPDYIAPE-ILLGQKYNHSVDWWSFGVLLYEMLIG 214
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V+K HK T S+ L+E E+ + + P+
Sbjct: 37 LGEGSYGSVYKAI--HKE---TGQIVAIKQVPVESD------LQEIIKEISIMQQCDSPH 85
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G +++ +V EY GS+ + + + L + I K L +LH
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQSTLKGLEYLHF 143
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
K I+RD KA NILL+ +AKL+DFG+A G + ++GT + APE +
Sbjct: 144 MRK--IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQE 199
Query: 287 GHLYVKSDVYGFGVVLLEMLTG 308
+D++ G+ +EM G
Sbjct: 200 IGYNCVADIWSLGITAIEMAEG 221
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 41/309 (13%)
Query: 91 LQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLR 150
L+D+ + F MLG+G FG V + + + + ++ D +
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD----IE 70
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQF------LLVYEYMQKGSLENHLFRKGSAEP 204
E+ E + +F HP++ KL+G R +++ +M+ G L L E
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 205 ---LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
LP T ++ +D A + +L S ++ I+RD A N +L ++DFGL++
Sbjct: 131 PFNLPLQTLVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR-KI 187
Query: 262 IDGNSH---VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPS 318
G+ + +++ + A E +A V SDV+ FGV + E++T R
Sbjct: 188 YSGDYYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT--------RGQ 237
Query: 319 GEHVLVDFARP--SLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSME 376
+ ++ A L RLK+ + +EE Y ++ +C A+PK RPS
Sbjct: 238 TPYAGIENAEIYNYLIGGNRLKQPPEC-MEEVY---------DLMYQCWSADPKQRPSFT 287
Query: 377 EVLETLQNI 385
+ L+NI
Sbjct: 288 CLRMELENI 296
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 105 TMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
MLG+G FG V K + N D+ LRE V+ L K H
Sbjct: 28 CMLGKGSFGEVLKC---KDRITQQEYAVKVINKASAKNKDTSTILRE----VELLKKLDH 80
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
PN++KL + F +V E G L + + ++ + + +I +T++
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYM 137
Query: 225 HSSEKSVIYRDFKASNILLDGS---YNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
H + ++++RD K NILL+ + K+ DFGL+ N+ + RI GT Y AP
Sbjct: 138 H--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAP 192
Query: 282 EYVATGHLYVKSDVYGFGVVLLEMLTG 308
E V G K DV+ GV+L +L+G
Sbjct: 193 E-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 25 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 84
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 85 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE 141
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 142 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 199
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 200 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 258
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 259 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 303
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 304 RPNFAIILERIE 315
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
R +LG G FG V KG W+ S S Q + + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGE--SIKIPVCIKVIEDKSGRQSFQAVTD---HMLA 68
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDA 217
+G H ++V+L+G C LV +Y+ GSL +H+ + +G+ P L +
Sbjct: 69 IGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP---QLLLNWGVQI 124
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
AK + +L E +++R+ A N+LL +++DFG+A L P D + +
Sbjct: 125 AKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + G +SDV+ +GV + E++T
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 52/295 (17%)
Query: 96 AATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAE 155
A N++ LGEG FG+V + H T + +QG + E
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKS--DMQG--RIERE 63
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAI 215
+ +L HP+++KL + ++V EY L +++ ++ + I
Sbjct: 64 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
A + + +++RD K N+LLD N K++DFGL+ + DGN T+ G+
Sbjct: 123 SAVE-----YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS--CGS 174
Query: 276 YGYAAPEYVATGHLYV--KSDVYGFGVVLLEMLT--------GLRALDTNRPSGEHVLVD 325
YAAPE V +G LY + DV+ GV+L ML + L N +G + L
Sbjct: 175 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 233
Query: 326 FARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
F P A +I + L P NR S+ E+++
Sbjct: 234 FLSPG--------------------------AAGLIKRMLIVNPLNRISIHEIMQ 262
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 27 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 86
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 87 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 143
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 144 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 201
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 202 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 260
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 261 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 305
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 306 RPNFAIILERIE 317
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 10 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 69
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 70 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 126
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 127 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 184
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 243
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 244 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 288
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 289 RPNFAIILERIE 300
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 32/250 (12%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 135
Query: 208 NTR------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFG 255
+ + AK + FL S + I+RD A NILL K+ DFG
Sbjct: 136 KPEDLYKDFLTLEHLIXYSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKICDFG 193
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTN 315
LA+ D + + APE + ++SDV+ FGV+L E+ + L +
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGAS 249
Query: 316 RPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSM 375
G + +F R L + R++ D E Y Q ++ C EP RP+
Sbjct: 250 PYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRPTF 298
Query: 376 EEVLETLQNI 385
E++E L N+
Sbjct: 299 SELVEHLGNL 308
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 33/201 (16%)
Query: 146 IQGLREWQ--AEVKFLGKFSHPNLVKLIGY----CWEDRQFLLVYEYMQKGSLENHLFRK 199
IQ + WQ EV L H N+++ IG D L+ + +KGSL + L
Sbjct: 57 IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--- 113
Query: 200 GSAEPLPWNTRLKIAIDAAKDLTFLHSS--------EKSVIYRDFKASNILLDGSYNAKL 251
A + WN IA A+ L +LH + ++ +RD K+ N+LL + A +
Sbjct: 114 -KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172
Query: 252 SDFGLA---KLGPIDGNSHVTTRIMGTYGYAAPEYVATGHL------YVKSDVYGFGVVL 302
+DFGLA + G G++H +GT Y APE V G + +++ D+Y G+VL
Sbjct: 173 ADFGLALKFEAGKSAGDTHGQ---VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVL 228
Query: 303 LEMLTGLRALDTNRPSGEHVL 323
E+ + A D P E++L
Sbjct: 229 WELASRCTAADG--PVDEYML 247
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 52/295 (17%)
Query: 96 AATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAE 155
A N++ LGEG FG+V + H T + +QG + E
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKS--DMQG--RIERE 54
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAI 215
+ +L HP+++KL + ++V EY L +++ ++ + I
Sbjct: 55 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
A + + +++RD K N+LLD N K++DFGL+ + DGN T+ G+
Sbjct: 114 SAVE-----YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS--CGS 165
Query: 276 YGYAAPEYVATGHLYV--KSDVYGFGVVLLEMLT--------GLRALDTNRPSGEHVLVD 325
YAAPE V +G LY + DV+ GV+L ML + L N +G + L
Sbjct: 166 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 224
Query: 326 FARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
F P A +I + L P NR S+ E+++
Sbjct: 225 FLSPG--------------------------AAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGL-----RE 151
AT + P +G G +G V+K H P+ +GL RE
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHS--------GHFVALKSVRVPNGEEGLPISTVRE 53
Query: 152 WQAEVKFLGKFSHPNLVKLIGYCWEDR-----QFLLVYEYMQKGSLENHLFRKGSAEPLP 206
A ++ L F HPN+V+L+ C R + LV+E++ + L +L K LP
Sbjct: 54 -VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLP 110
Query: 207 WNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS 266
T + + L FLH++ +++RD K NIL+ KL+DFGLA+ I
Sbjct: 111 AETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQ 165
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEML 306
++ T Y APE + D++ G + EM
Sbjct: 166 MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 52/295 (17%)
Query: 96 AATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAE 155
A N++ LGEG FG+V + H T + +QG + E
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKS--DMQG--RIERE 58
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAI 215
+ +L HP+++KL + ++V EY L +++ ++ + I
Sbjct: 59 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
A + + +++RD K N+LLD N K++DFGL+ + DGN T+ G+
Sbjct: 118 SAVE-----YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS--CGS 169
Query: 276 YGYAAPEYVATGHLYV--KSDVYGFGVVLLEMLT--------GLRALDTNRPSGEHVLVD 325
YAAPE V +G LY + DV+ GV+L ML + L N +G + L
Sbjct: 170 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK 228
Query: 326 FARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
F P A +I + L P NR S+ E+++
Sbjct: 229 FLSPG--------------------------AAGLIKRMLIVNPLNRISIHEIMQ 257
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGL-----RE 151
AT + P +G G +G V+K H P+ +GL RE
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHS--------GHFVALKSVRVPNGEEGLPISTVRE 53
Query: 152 WQAEVKFLGKFSHPNLVKLIGYCWEDR-----QFLLVYEYMQKGSLENHLFRKGSAEPLP 206
A ++ L F HPN+V+L+ C R + LV+E++ + L +L K LP
Sbjct: 54 -VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLP 110
Query: 207 WNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS 266
T + + L FLH++ +++RD K NIL+ KL+DFGLA+ I
Sbjct: 111 AETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQ 165
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEML 306
++ T Y APE + D++ G + EM
Sbjct: 166 MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 2 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 61
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 62 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 118
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 119 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 176
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 177 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 235
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 236 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 280
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 281 RPNFAIILERIE 292
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 10 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 69
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 70 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE 126
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 127 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 184
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 243
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 244 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 288
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 289 RPNFAIILERIE 300
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 133
Query: 208 NTR--------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSD 253
+ + AK + FL S + I+RD A NILL K+ D
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICD 191
Query: 254 FGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
FGLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LG 247
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+ G + +F R L + R++ D E Y Q ++ C EP RP
Sbjct: 248 ASPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRP 296
Query: 374 SMEEVLETLQNI 385
+ E++E L N+
Sbjct: 297 TFSELVEHLGNL 308
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 23/209 (11%)
Query: 106 MLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKF 162
+LG G FG V+KG WV P +N E+ E +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-------VEFMDEALIMASM 74
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLKIAIDAA 218
HP+LV+L+G C LV + M G L ++ GS L W + A
Sbjct: 75 DHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIA 127
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
K + +L E+ +++RD A N+L+ + K++DFGLA+L D + +
Sbjct: 128 KGMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
A E + +SDV+ +GV + E++T
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG+ + +N +++ E AE + +
Sbjct: 375 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 429
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 485
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 486 L--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 30/248 (12%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 133
Query: 208 NTRLK----------IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA 257
K + AK + FL S + I+RD A NILL K+ DFGLA
Sbjct: 134 KDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKICDFGLA 191
Query: 258 KLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
+ D + + APE + ++SDV+ FGV+L E+ + L +
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPY 247
Query: 318 SGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEE 377
G + +F R L + R++ D E Y Q ++ C EP RP+ E
Sbjct: 248 PGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRPTFSE 296
Query: 378 VLETLQNI 385
++E L N+
Sbjct: 297 LVEHLGNL 304
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 124
Query: 208 NTR--------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSD 253
+ + AK + FL S + I+RD A NILL K+ D
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICD 182
Query: 254 FGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
FGLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LG 238
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+ G + +F R L + R++ D E Y Q ++ C EP RP
Sbjct: 239 ASPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRP 287
Query: 374 SMEEVLETLQNI 385
+ E++E L N+
Sbjct: 288 TFSELVEHLGNL 299
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 23/209 (11%)
Query: 106 MLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKF 162
+LG G FG V+KG WV P +N E+ E +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-------VEFMDEALIMASM 97
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLKIAIDAA 218
HP+LV+L+G C LV + M G L ++ GS L W + A
Sbjct: 98 DHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIA 150
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
K + +L E+ +++RD A N+L+ + K++DFGLA+L D + +
Sbjct: 151 KGMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
A E + +SDV+ +GV + E++T
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 129/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P
Sbjct: 25 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSG---MPNDPSPLQVAVK 81
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 82 TLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 141
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 142 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 199
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 200 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 258
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 259 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 303
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 304 RPNFAIILERIE 315
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG+ + +N +++ E AE + +
Sbjct: 374 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 428
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 429 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 484
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 485 L--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 542
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 91 LQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLR 150
++DLR +++ ++G G FG V V HK+ DS
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFF-- 121
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLP--WN 208
W+ E + + P +V+L +DR +V EYM G L N + E +
Sbjct: 122 -WE-ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT 179
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
+ +A+DA + F+H RD K N+LLD S + KL+DFG +G
Sbjct: 180 AEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 269 TTRIMGTYGYAAPEYVAT----GHLYVKSDVYGFGVVLLEMLTG 308
T + GT Y +PE + + G+ + D + GV L EML G
Sbjct: 232 DTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPY 124
Query: 208 NTR--------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSD 253
+ + AK + FL S + I+RD A NILL K+ D
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICD 182
Query: 254 FGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
FGLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LG 238
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+ G + +F R L + R++ D E Y Q ++ C EP RP
Sbjct: 239 ASPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRP 287
Query: 374 SMEEVLETLQNI 385
+ E++E L N+
Sbjct: 288 TFSELVEHLGNL 299
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 91 LQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLR 150
++DLR +++ ++G G FG V V HK+ DS
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFF-- 116
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLP--WN 208
W+ E + + P +V+L +DR +V EYM G L N + E +
Sbjct: 117 -WE-ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT 174
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
+ +A+DA + F+H RD K N+LLD S + KL+DFG +G
Sbjct: 175 AEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226
Query: 269 TTRIMGTYGYAAPEYVAT----GHLYVKSDVYGFGVVLLEMLTG 308
T + GT Y +PE + + G+ + D + GV L EML G
Sbjct: 227 DTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 17/210 (8%)
Query: 100 NFRPDTMLGEGGFGRVFKG--WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVK 157
NFR + +G G F V++ +D +A + D I+ E+
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVA-LKKVQIFDLMDAKARADCIK-------EID 84
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL--FRKGSAEPLPWNTRLKIAI 215
L + +HPN++K ED + +V E G L + F+K +P T K +
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFV 143
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
L +HS + V++RD K +N+ + + KL D GL + + ++GT
Sbjct: 144 QLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGT 199
Query: 276 YGYAAPEYVATGHLYVKSDVYGFGVVLLEM 305
Y +PE + KSD++ G +L EM
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 17 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 76
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 77 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 133
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 134 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 191
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 192 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 250
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 251 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 295
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 296 RPNFAIILERIE 307
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 45/241 (18%)
Query: 94 LRAATKNFRPDTMLGEGGFGRVFKG--WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE 151
LR A+ +F +LG+G FG+V K +D + A + L
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE------------EKLST 48
Query: 152 WQAEVKFLGKFSHPNLVKLIGYCWEDRQFL-------------LVYEYMQKGSLENHLFR 198
+EV L +H +V+ E R F+ + EY + G+L + +
Sbjct: 49 ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS 108
Query: 199 KGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK 258
+ + RL I A L+++HS + +I+RD K NI +D S N K+ DFGLAK
Sbjct: 109 ENLNQQRDEYWRLFRQILEA--LSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Query: 259 -------LGPID-----GNSHVTTRIMGTYGYAAPEYV-ATGHLYVKSDVYGFGVVLLEM 305
+ +D G+S T +GT Y A E + TGH K D+Y G++ EM
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 306 L 306
+
Sbjct: 225 I 225
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 37 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 96
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 97 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 153
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 154 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 211
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 212 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 270
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 271 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 315
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 316 RPNFAIILERIE 327
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 71 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 185
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 186 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 244
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 245 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 289
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 290 RPNFAIILERIE 301
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG + + +N +++ E AE + +
Sbjct: 16 DKELGSGNFGTVKKG---YYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 70
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 126
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 127 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 91 LQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLR 150
++DLR +++ ++G G FG V V HK+ DS
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFF-- 121
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLP--WN 208
W+ E + + P +V+L +DR +V EYM G L N + E +
Sbjct: 122 -WE-ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT 179
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
+ +A+DA + F+H RD K N+LLD S + KL+DFG +G
Sbjct: 180 AEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 269 TTRIMGTYGYAAPEYVAT----GHLYVKSDVYGFGVVLLEMLTG 308
T + GT Y +PE + + G+ + D + GV L EML G
Sbjct: 232 DTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 133
Query: 208 NTR--------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSD 253
+ + AK + FL S + I+RD A NILL K+ D
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICD 191
Query: 254 FGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
FGLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 192 FGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LG 247
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+ G + +F R L + R++ D E Y Q ++ C EP RP
Sbjct: 248 ASPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRP 296
Query: 374 SMEEVLETLQNI 385
+ E++E L N+
Sbjct: 297 TFSELVEHLGNL 308
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG + + +N +++ E AE + +
Sbjct: 32 DKELGSGNFGTVKKG---YYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 86
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 142
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 143 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG + + +N +++ E AE + +
Sbjct: 32 DKELGSGNFGTVKKG---YYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 86
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 142
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 143 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG + + +N +++ E AE + +
Sbjct: 30 DKELGSGNFGTVKKG---YYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 84
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 140
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 141 L--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + KF+H N+V+ IG + ++ E M G L++ L
Sbjct: 71 EVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 185
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 186 GDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 244
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 245 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 289
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 290 RPNFAIILERIE 301
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 30/248 (12%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 133
Query: 208 NTRLK----------IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA 257
K + AK + FL S + I+RD A NILL K+ DFGLA
Sbjct: 134 KDLYKDFLTLEHLIXYSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKIXDFGLA 191
Query: 258 KLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
+ D + + APE + ++SDV+ FGV+L E+ + L +
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPY 247
Query: 318 SGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEE 377
G + +F R L + R++ D E Y Q ++ C EP RP+ E
Sbjct: 248 PGVKIDEEFXR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRPTFSE 296
Query: 378 VLETLQNI 385
++E L N+
Sbjct: 297 LVEHLGNL 304
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG + + +N +++ E AE + +
Sbjct: 22 DKELGSGNFGTVKKG---YYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 76
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 132
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 133 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 150 REWQAEVKFLGKFSH-PNLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 112 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 170
Query: 208 NTR--------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSD 253
+ + AK + FL S + I+RD A NILL K+ D
Sbjct: 171 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICD 228
Query: 254 FGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
FGLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 229 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LG 284
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+ G + +F R L + R++ D E Y Q ++ C EP RP
Sbjct: 285 ASPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRP 333
Query: 374 SMEEVLETLQNI 385
+ E++E L N+
Sbjct: 334 TFSELVEHLGNL 345
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG + + +N +++ E AE + +
Sbjct: 16 DKELGSGNFGTVKKG---YYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 70
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 126
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 127 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG + + +N +++ E AE + +
Sbjct: 10 DKELGSGNFGTVKKG---YYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 64
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 120
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 121 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D LG G FG V KG + + +N +++ E AE + +
Sbjct: 12 DKELGSGNFGTVKKG---YYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 66
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
+P +V++IG C E ++LV E + G L +L + + +++ + + +
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKY 122
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH-VTTRIMGTYGYAAPE 282
L E + ++RD A N+LL + AK+SDFGL+K D N + T + APE
Sbjct: 123 LE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ KSDV+ FGV++ E +
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 38/224 (16%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVKFLGKFSHP 165
LGE FG+V+KG P + LRE ++ E + HP
Sbjct: 34 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR----------------KGSAEPLPWNT 209
N+V L+G +D+ +++ Y G L L K + EP P
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP-PDFV 148
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGL------AKLGPID 263
L I A + + S V+++D N+L+ N K+SD GL A +
Sbjct: 149 HLVAQIAAGME----YLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 264 GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
GNS + R M APE + G + SD++ +GVVL E+ +
Sbjct: 205 GNSLLPIRWM------APEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 133
Query: 208 NTR--------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSD 253
+ + AK + FL S + I+RD A NILL K+ D
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICD 191
Query: 254 FGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
FGLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 192 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LG 247
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+ G + +F R L + R++ D E Y Q ++ C EP RP
Sbjct: 248 ASPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRP 296
Query: 374 SMEEVLETLQNI 385
+ E++E L N+
Sbjct: 297 TFSELVEHLGNL 308
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 93/238 (39%), Gaps = 33/238 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG GGFG V + W+ T S + W E++ + K +HPN
Sbjct: 22 LGTGGFGYVLR-WIHQDT-------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 167 LVKL------IGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKD 220
+V + + LL EY + G L +L + + L + D +
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNA---KLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
L +LH E +I+RD K NI+L K+ D G AK +D + T +GT
Sbjct: 134 LRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELD-QGELCTEFVGTLQ 188
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTN-----------RPSGEHVLV 324
Y APE + V D + FG + E +TG R N S EH++V
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPY 124
Query: 208 NTR--------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSD 253
+ + AK + FL S + I+RD A NILL K+ D
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICD 182
Query: 254 FGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
FGLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LG 238
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+ G + +F R L + R++ D E Y Q ++ C EP RP
Sbjct: 239 ASPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRP 287
Query: 374 SMEEVLETLQNI 385
+ E++E L N+
Sbjct: 288 TFSELVEHLGNL 299
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 93/238 (39%), Gaps = 33/238 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG GGFG V + W+ T S + W E++ + K +HPN
Sbjct: 23 LGTGGFGYVLR-WIHQDT-------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 167 LVKL------IGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKD 220
+V + + LL EY + G L +L + + L + D +
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNA---KLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
L +LH E +I+RD K NI+L K+ D G AK +D + T +GT
Sbjct: 135 LRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELD-QGELCTEFVGTLQ 189
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTN-----------RPSGEHVLV 324
Y APE + V D + FG + E +TG R N S EH++V
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 247
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVKFLGKFSHP 165
LGE FG+V+KG P + LRE ++ E + HP
Sbjct: 17 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
N+V L+G +D+ +++ Y G L L + + + A + F+H
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 226 -----------SSEKSVIYRDFKASNILLDGSYNAKLSDFGL------AKLGPIDGNSHV 268
S V+++D N+L+ N K+SD GL A + GNS +
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 269 TTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
R M APE + G + SD++ +GVVL E+ +
Sbjct: 193 PIRWM------APEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLV-YEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
+ + HP VKL +C++D + L Y + G L ++ + GS + TR A +
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EI 146
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT
Sbjct: 147 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
Y +PE + SD++ G ++ +++ GL
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGL 236
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARF 109
Query: 214 -AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ L +LHS + V+YRD K N++LD + K++DFGL K G DG + T
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 165
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPY 124
Query: 208 NTR--------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSD 253
+ + AK + FL S + I+RD A NILL K+ D
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICD 182
Query: 254 FGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
FGLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LG 238
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+ G + +F R L + R++ D E Y Q ++ C EP RP
Sbjct: 239 ASPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRP 287
Query: 374 SMEEVLETLQNI 385
+ E++E L N+
Sbjct: 288 TFSELVEHLGNL 299
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 129/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 25 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 84
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + K +H N+V+ IG + ++ E M G L++ L
Sbjct: 85 EVC---SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 141
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 142 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 199
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 200 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 258
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 259 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 303
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 304 RPNFAIILERIE 315
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 137/301 (45%), Gaps = 48/301 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLA--PTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
LG+G FG V++G V + P S + I+ L E + +F+
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE----ASVMKEFNC 77
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL--FRKGSAE-----PLPWNTRLKIAIDA 217
++V+L+G + + L++ E M +G L+++L R A P + +++A +
Sbjct: 78 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 137
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTR 271
A + +L++++ ++RD A N ++ + K+ DFG+ + + D G + R
Sbjct: 138 ADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
M +PE + G SDV+ FGVVL E+ T L + L
Sbjct: 196 WM------SPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGL 234
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIE 391
++++ L+ +M+ L ++ P + +++ C + PK RPS E++ +++ E+E
Sbjct: 235 SNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE----EME 289
Query: 392 P 392
P
Sbjct: 290 P 290
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 150 REWQAEVKFLGKFSHP-NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R +E+K L H N+V L+G C + +++ E+ + G+L +L R E +P+
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPY 135
Query: 208 NTR--------------LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSD 253
+ + AK + FL S + I+RD A NILL K+ D
Sbjct: 136 KEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICD 193
Query: 254 FGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALD 313
FGLA+ D + + APE + ++SDV+ FGV+L E+ + L
Sbjct: 194 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LG 249
Query: 314 TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+ G + +F R L + R++ D E Y Q ++ C EP RP
Sbjct: 250 ASPYPGVKIDEEFCR-RLKEGTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRP 298
Query: 374 SMEEVLETLQNI 385
+ E++E L N+
Sbjct: 299 TFSELVEHLGNL 310
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARF 112
Query: 214 -AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ L +LHS + V+YRD K N++LD + K++DFGL K G DG + T
Sbjct: 113 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 168
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARF 109
Query: 214 -AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ L +LHS + V+YRD K N++LD + K++DFGL K G DG + T
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 165
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 20/177 (11%)
Query: 142 NPDSIQGLRE-WQAEVKFLGKFS-HPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFR 198
+P+ ++ +RE + E L + + HP+++ LI +E F+ LV++ M+KG L ++L
Sbjct: 135 SPEQLEEVREATRRETHILRQVAGHPHIITLID-SYESSSFMFLVFDLMRKGELFDYLTE 193
Query: 199 KGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA- 257
K + + ++ ++A ++FLH++ ++++RD K NILLD + +LSDFG +
Sbjct: 194 KVALSEKETRSIMRSLLEA---VSFLHAN--NIVHRDLKPENILLDDNMQIRLSDFGFSC 248
Query: 258 KLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYV------KSDVYGFGVVLLEMLTG 308
L P + GT GY APE + + D++ GV+L +L G
Sbjct: 249 HLEP----GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL 134
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 135 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 33/258 (12%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L + HPN+V LI +R LV+E+M+K L+ L + ++++KI
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ---DSQIKIY 124
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ H + +++RD K N+L++ KL+DFGLA+ I S+ T +
Sbjct: 125 LYQLLR-GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVV 181
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
T Y AP+ + Y S D++ G + EM+TG +P P +TD
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-------KP---------LFPGVTD 225
Query: 334 KRRLKKIMD----PRLEEQYPIKGALLAGQIIIKCLEAEPKNR--PSM-EEVLETLQNIS 386
+L KI P E ++ L Q + E +P + P +E ++ L N+
Sbjct: 226 DDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNM- 284
Query: 387 VIEIEPKKKAKARGNYNN 404
+ +P K+ AR N+
Sbjct: 285 -LCFDPNKRISARDAMNH 301
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 49/329 (14%)
Query: 81 VTPNYLK---MFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTL-APTXXXXXXXX 136
V P Y ++ + A + LG+G FG V++G P
Sbjct: 4 VNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 63
Query: 137 XXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL 196
S + I+ L E + +F+ ++V+L+G + + L++ E M +G L+++L
Sbjct: 64 NEAASMRERIEFLNE----ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 197 --FRKGSAE-----PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA 249
R A P + +++A + A + +L++++ ++RD A N ++ +
Sbjct: 120 RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTV 177
Query: 250 KLSDFGLAK-LGPID-----GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLL 303
K+ DFG+ + + D G + R M +PE + G SDV+ FGVVL
Sbjct: 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLW 231
Query: 304 EMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIK 363
E+ T L + L++++ L+ +M+ L ++ P + +++
Sbjct: 232 EIAT---------------LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRM 275
Query: 364 CLEAEPKNRPSMEEVLETLQNISVIEIEP 392
C + PK RPS E++ +++ E+EP
Sbjct: 276 CWQYNPKMRPSFLEIISSIKE----EMEP 300
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 33/258 (12%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L + HPN+V LI +R LV+E+M+K L+ L + ++++KI
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ---DSQIKIY 124
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ H + +++RD K N+L++ KL+DFGLA+ I S+ T +
Sbjct: 125 LYQLLR-GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVV 181
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
T Y AP+ + Y S D++ G + EM+TG +P P +TD
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-------KP---------LFPGVTD 225
Query: 334 KRRLKKIMD----PRLEEQYPIKGALLAGQIIIKCLEAEPKNR--PSM-EEVLETLQNIS 386
+L KI P E ++ L Q + E +P + P +E ++ L N+
Sbjct: 226 DDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNM- 284
Query: 387 VIEIEPKKKAKARGNYNN 404
+ +P K+ AR N+
Sbjct: 285 -LCFDPNKRISARDAMNH 301
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 138
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 139 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 242
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 131 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 135 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 135 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 135 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQ-AEVK 157
+N+ P +LG G V + + T + + +Q LRE EV
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 158 FLGKFS-HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L K S HPN+++L + F LV++ M+KG L ++L K + L KI
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRA 132
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGT 275
+ + LH + ++++RD K NILLD N KL+DFG + +L P + V GT
Sbjct: 133 LLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC----GT 186
Query: 276 YGYAAPEYVATGHL-----YVKS-DVYGFGVVLLEMLTG 308
Y APE + Y K D++ GV++ +L G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 31/232 (13%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAEP-LPWN 208
+ E+ +P++V G+ +D +V E ++ SL E H RK EP +
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
R I + + +LH++ VI+RD K N+ L+ + K+ DFGLA DG
Sbjct: 148 MRQTI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 269 TTRIMGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
T + GT Y APE + GH + + D++ G +L +L G +T+ ++
Sbjct: 201 T--LCGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTLLVGKPPFETSCLKETYI----- 252
Query: 328 RPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK E P +A +I + L A+P RPS+ E+L
Sbjct: 253 --------RIKKN-----EYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 136 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 239
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E++ L +F H N++ + + Y+ + +E L++ ++ L +
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+L++ + + K+ DFGLA++ P ++ T +
Sbjct: 151 YQILRGLKYIHSA--NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 254
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 136
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 137 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 240
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 127
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 128 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 231
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 135 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 129 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 129 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 232
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 38/290 (13%)
Query: 104 DTMLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKF 162
D ++G+G FG V+ G ++D S +Q + + E +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQ------NRIQCAIKSLSRITEMQQVEAFLREGLLMRGL 79
Query: 163 SHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDL 221
+HPN++ LIG ++ YM G L R P + + + A+ +
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ-FIRSPQRNPTVKDL-ISFGLQVARGM 137
Query: 222 TFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK------LGPIDGNSHVTTRIMGT 275
+L +E+ ++RD A N +LD S+ K++DFGLA+ + + H + T
Sbjct: 138 EYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT 195
Query: 276 YGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKR 335
A E + T KSDV+ FGV+L E+LT R R L F L R
Sbjct: 196 ----ALESLQTYRFTTKSDVWSFGVLLWELLT--RGAPPYRHIDPFDLTHF----LAQGR 245
Query: 336 RLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
RL + E P Q++ +C EA+P RP+ ++ ++ I
Sbjct: 246 RLPQ------PEYCPDS----LYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 120
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 121 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 209
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 131 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 131 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 119
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 120 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 208
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 150
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 151 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 254
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 142
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAGL 231
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 131 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 140
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 141 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 143
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 144 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 133 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 142
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 143
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 144 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 142
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 15/211 (7%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
+ + E++ HPN++++ Y + ++ L+ E+ +G L L + G + T
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 120
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
++ DA L + H E+ VI+RD K N+L+ K++DFG + P S
Sbjct: 121 MEELADA---LHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRR 171
Query: 271 RIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEH---VLVDFA 327
+ GT Y PE + K D++ GV+ E L G+ D+ + H V VD
Sbjct: 172 XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 231
Query: 328 RPS-LTD--KRRLKKIMDPRLEEQYPIKGAL 355
P L+D K + K++ ++ P+KG +
Sbjct: 232 FPPFLSDGSKDLISKLLRYHPPQRLPLKGVM 262
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET--CTRFYTA-EIV 142
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAGL 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 118
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 119 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 207
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 142
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 45/296 (15%)
Query: 92 QDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE 151
+D A +R +LG+GGFG VF G H+ +
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAG---HRLTDRLQVAIKVIPRNRVLGWSPLSDSVT 80
Query: 152 WQAEVKFLGKFS----HPNLVKLIGYCWEDRQFLLVYEY-MQKGSLENHLFRKGSAEPLP 206
EV L K HP +++L+ + F+LV E + L +++ KG P
Sbjct: 81 CPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP 140
Query: 207 WNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN-AKLSDFGLAKLGPIDGN 265
+ A + H + V++RD K NIL+D AKL DFG L +
Sbjct: 141 SRCFFGQVVAAIQ-----HCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL----LH 191
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVL 323
T GT Y+ PE+++ H Y + + V+ G++L +M+ G
Sbjct: 192 DEPYTDFDGTRVYSPPEWISR-HQYHALPATVWSLGILLYDMVCG--------------D 236
Query: 324 VDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
+ F R D+ L+ E +P + +I +CL +P +RPS+EE+L
Sbjct: 237 IPFER----DQEILEA------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQ-AEVK 157
+N+ P +LG G V + + T + + +Q LRE EV
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 158 FLGKFS-HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L K S HPN+++L + F LV++ M+KG L ++L K + L KI
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRA 132
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGT 275
+ + LH + ++++RD K NILLD N KL+DFG + +L P + V GT
Sbjct: 133 LLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC----GT 186
Query: 276 YGYAAPEYVATGHL-----YVKS-DVYGFGVVLLEMLTG 308
Y APE + Y K D++ GV++ +L G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 140
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 141 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA-EVK 157
+N+ P +LG G V + + T + + +Q LRE EV
Sbjct: 4 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 158 FLGKFS-HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L K S HPN+++L + F LV++ M+KG L ++L K + L KI
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRA 119
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA-KLGPIDGNSHVTTRIMGT 275
+ + LH + ++++RD K NILLD N KL+DFG + +L P + V GT
Sbjct: 120 LLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC----GT 173
Query: 276 YGYAAPEYVATGHL-----YVKS-DVYGFGVVLLEMLTG 308
Y APE + Y K D++ GV++ +L G
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 117
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 118 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 206
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
K+ R LG+G FG V +G D + S P+++ ++ EV
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD---DFIREVNA 68
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ H NL++L G +V E GSL + L RK L T + A+ A
Sbjct: 69 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL-RKHQGHFL-LGTLSRYAVQVA 125
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YG 277
+ + +L S K I+RD A N+LL K+ DFGL + P + + +V +
Sbjct: 126 EGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ APE + T SD + FGV L EM T
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 140
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 141 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 142
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E++ HPN++++ Y + ++ L+ E+ +G L L + G + T ++
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
DA L + H E+ VI+RD K N+L+ K++DFG + P S + G
Sbjct: 124 ADA---LHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCG 174
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEH---VLVDFARPS- 330
T Y PE + K D++ GV+ E L G+ D+ + H V VD P
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 331 LTD--KRRLKKIMDPRLEEQYPIKGAL 355
L+D K + K++ ++ P+KG +
Sbjct: 235 LSDGSKDLISKLLRYHPPQRLPLKGVM 261
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 129/312 (41%), Gaps = 32/312 (10%)
Query: 83 PNYL---KMFTLQDLRAAT-KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXX 138
PNY K ++ DL+ KN LG G FG V++G V P+
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 139 XXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-- 196
S Q ++ E + K +H N+V+ IG + ++ E M G L++ L
Sbjct: 71 EVC---SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 197 FRKGSAEP--LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKL 251
R ++P L L +A D A +L E I+RD A N LL AK+
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKI 185
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA 311
DFG+A+ M + PE G K+D + FGV+L E+ + L
Sbjct: 186 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGY 244
Query: 312 LDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
+ S + VL +F +T R MDP P+ +I+ +C + +P++
Sbjct: 245 MPYPSKSNQEVL-EF----VTSGGR----MDPPKNCPGPVY------RIMTQCWQHQPED 289
Query: 372 RPSMEEVLETLQ 383
RP+ +LE ++
Sbjct: 290 RPNFAIILERIE 301
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 131 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 234
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARF 114
Query: 214 -AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ L +LHS + V+YRD K N++LD + K++DFGL K G DG +
Sbjct: 115 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 170
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
K+ R LG+G FG V +G D + S P+++ ++ EV
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD---DFIREVNA 68
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ H NL++L G +V E GSL + L RK L T + A+ A
Sbjct: 69 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL-RKHQGHFL-LGTLSRYAVQVA 125
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YG 277
+ + +L S K I+RD A N+LL K+ DFGL + P + + +V +
Sbjct: 126 EGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ APE + T SD + FGV L EM T
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 140
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 141 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 145
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 146 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 234
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARF 109
Query: 214 -AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ L +LHS + V+YRD K N++LD + K++DFGL K G DG +
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 25/227 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ + + +PN+V + + +V EY+ GSL + + E +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVC 122
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L FLHS++ VI+RD K+ NILL + KL+DFG I + ++G
Sbjct: 123 RECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVG 178
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA-LDTNRPSGEHVLVDFARPSLTD 333
T + APE V K D++ G++ +EM+ G L+ N +++ P L +
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+L I L +CLE + + R S +E+L+
Sbjct: 239 PEKLSAIFRDFLN----------------RCLEMDVEKRGSAKELLQ 269
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT-- 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S T + G
Sbjct: 120 -ELANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSRRTTLCG 172
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G+ + + T +
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH----------------TYQ 216
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
++I R+E +P A +I + L+ R ++ EVLE
Sbjct: 217 ETYRRI--SRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
K+ R LG+G FG V +G D + S P+++ ++ EV
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD---DFIREVNA 74
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ H NL++L G +V E GSL + L RK L T + A+ A
Sbjct: 75 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL-RKHQGHFL-LGTLSRYAVQVA 131
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YG 277
+ + +L S K I+RD A N+LL K+ DFGL + P + + +V +
Sbjct: 132 EGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 189
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ APE + T SD + FGV L EM T
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 48/301 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTL-APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG+G FG V++G P S + I+ L E + +F+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE----ASVMKEFNCH 82
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--------PLPWNTRLKIAIDA 217
++V+L+G + + L++ E M +G L+++L R E P + +++A +
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTR 271
A + +L++++ ++RD A N ++ + K+ DFG+ + + D G + R
Sbjct: 142 ADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
M +PE + G SDV+ FGVVL E+ T L + L
Sbjct: 200 WM------SPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGL 238
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIE 391
++++ L+ +M+ L ++ P + +++ C + PK RPS E++ +++ E+E
Sbjct: 239 SNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE----EME 293
Query: 392 P 392
P
Sbjct: 294 P 294
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARF 109
Query: 214 -AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ L +LHS + V+YRD K N++LD + K++DFGL K G DG +
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E++ HPN++++ Y + ++ L+ E+ +G L L + G + T ++
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
DA L + H E+ VI+RD K N+L+ K++DFG + P S + G
Sbjct: 124 ADA---LHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCG 174
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEH---VLVDFARPS- 330
T Y PE + K D++ GV+ E L G+ D+ + H V VD P
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 331 LTD--KRRLKKIMDPRLEEQYPIKGAL 355
L+D K + K++ ++ P+KG +
Sbjct: 235 LSDGSKDLISKLLRYHPPQRLPLKGVM 261
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 154 AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKI 213
E + L HP L L + V EY G L HL S E + R +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARF 109
Query: 214 -AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ L +LHS + V+YRD K N++LD + K++DFGL K G DG +
Sbjct: 110 YGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT Y APE + D +G GVV+ EM+ G
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
K+ R LG+G FG V +G D + S P+++ ++ EV
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD---DFIREVNA 64
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ H NL++L G +V E GSL + L RK L T + A+ A
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL-RKHQGHFL-LGTLSRYAVQVA 121
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YG 277
+ + +L S K I+RD A N+LL K+ DFGL + P + + +V +
Sbjct: 122 EGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ APE + T SD + FGV L EM T
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 143/330 (43%), Gaps = 51/330 (15%)
Query: 81 VTPNYLK---MFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTL-APTXXXXXXXX 136
V P Y ++ + A + LG+G FG V++G P
Sbjct: 26 VNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 85
Query: 137 XXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL 196
S + I+ L E + +F+ ++V+L+G + + L++ E M +G L+++L
Sbjct: 86 NEAASMRERIEFLNE----ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
Query: 197 FRKGSAE--------PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN 248
R E P + +++A + A + +L++++ ++RD A N ++ +
Sbjct: 142 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFT 198
Query: 249 AKLSDFGLAK-LGPID-----GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVL 302
K+ DFG+ + + D G + R M +PE + G SDV+ FGVVL
Sbjct: 199 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVL 252
Query: 303 LEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIII 362
E+ T L + L++++ L+ +M+ L ++ P + +++
Sbjct: 253 WEIAT---------------LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMR 296
Query: 363 KCLEAEPKNRPSMEEVLETLQNISVIEIEP 392
C + PK RPS E++ +++ E+EP
Sbjct: 297 MCWQYNPKMRPSFLEIISSIKE----EMEP 322
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 101 FRPDTMLGEGGFGRVFKG-WVD--HKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVK 157
R +LG G FG V+KG W+ P +N +E E
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN-------KEILDEAY 71
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF----RKGSAEPLPWNTRLKI 213
+ P + +L+G C LV + M G L +H+ R GS + L W ++
Sbjct: 72 VMAGVGSPYVSRLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI-- 128
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
AK +++L + +++RD A N+L+ + K++DFGLA+L ID +
Sbjct: 129 ----AKGMSYLE--DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGK 182
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT-GLRALDTNRPSGEHVLVDFARPSLT 332
+ A E + +SDV+ +GV + E++T G + D P+ E P L
Sbjct: 183 VPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD-GIPAREI-------PDLL 234
Query: 333 DK-RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
+K RL + P + I++KC + + RP E++ ++
Sbjct: 235 EKGERLPQ----------PPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMA 279
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 124
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 125 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 213
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 112/294 (38%), Gaps = 38/294 (12%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVKFLGKF-SH 164
LG G FG+V V+ P + RE +E+K L +H
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT--------------- 209
N+V L+G C L++ EY G L N L RK + +
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
L + AK + FL S K+ I+RD A NILL K+ DFGLA+ D N V
Sbjct: 147 LLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 249
Query: 330 SLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
+ + K++ P I+ C +A+P RP+ +++++ ++
Sbjct: 250 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 48/301 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTL-APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG+G FG V++G P S + I+ L E + +F+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE----ASVMKEFNCH 73
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--------PLPWNTRLKIAIDA 217
++V+L+G + + L++ E M +G L+++L R E P + +++A +
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEI 132
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTR 271
A + +L++++ ++RD A N ++ + K+ DFG+ + + D G + R
Sbjct: 133 ADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
M +PE + G SDV+ FGVVL E+ T L + L
Sbjct: 191 WM------SPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGL 229
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIE 391
++++ L+ +M+ L ++ P + +++ C + PK RPS E++ +++ E+E
Sbjct: 230 SNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE----EME 284
Query: 392 P 392
P
Sbjct: 285 P 285
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
K+ R LG+G FG V +G D + S P+++ ++ EV
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD---DFIREVNA 64
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ H NL++L G +V E GSL + L RK L T + A+ A
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL-RKHQGHFL-LGTLSRYAVQVA 121
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YG 277
+ + +L S K I+RD A N+LL K+ DFGL + P + + +V +
Sbjct: 122 EGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ APE + T SD + FGV L EM T
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAID 216
L HP LV L + V +Y+ G L HL R + EP R A +
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP---RARF-YAAE 147
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY 276
A L +LHS +++YRD K NILLD + L+DFGL K I+ NS T+ GT
Sbjct: 148 IASALGYLHSL--NIVYRDLKPENILLDSQGHIVLTDFGLCKEN-IEHNS-TTSTFCGTP 203
Query: 277 GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
Y APE + D + G VL EML GL
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 112/294 (38%), Gaps = 38/294 (12%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVKFLGKF-SH 164
LG G FG+V V+ P + RE +E+K L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT--------------- 209
N+V L+G C L++ EY G L N L RK + +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
L + AK + FL S K+ I+RD A NILL K+ DFGLA+ D N V
Sbjct: 170 LLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 272
Query: 330 SLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
+ + K++ P I+ C +A+P RP+ +++++ ++
Sbjct: 273 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 112/294 (38%), Gaps = 38/294 (12%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVKFLGKF-SH 164
LG G FG+V V+ P + RE +E+K L +H
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT--------------- 209
N+V L+G C L++ EY G L N L RK + +
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
L + AK + FL S K+ I+RD A NILL K+ DFGLA+ D N V
Sbjct: 163 LLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 265
Query: 330 SLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
+ + K++ P I+ C +A+P RP+ +++++ ++
Sbjct: 266 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 40/239 (16%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEP------ 204
E + EV L HPN+V+ E+ +V +Y + G L F++ +A+
Sbjct: 69 ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL----FKRINAQKGVLFQE 124
Query: 205 ---LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
L W ++ +A+ H ++ +++RD K+ NI L +L DFG+A++
Sbjct: 125 DQILDWFVQICLALK--------HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV-- 174
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEH 321
++ + +GT Y +PE KSD++ G VL E+ T A + S ++
Sbjct: 175 LNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG--SMKN 232
Query: 322 VLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+++ S P + Y L Q+ + P++RPS+ +LE
Sbjct: 233 LVLKIISGSF-----------PPVSLHYSYDLRSLVSQL----FKRNPRDRPSVNSILE 276
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPE 144
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E L + A A+ + +L S K I+RD A N+L+ K++DFGLA+ +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV+L E+ T
Sbjct: 203 IDXXKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 48/301 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTL-APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG+G FG V++G P S + I+ L E + +F+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE----ASVMKEFNCH 75
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--------PLPWNTRLKIAIDA 217
++V+L+G + + L++ E M +G L+++L R E P + +++A +
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTR 271
A + +L++++ ++RD A N ++ + K+ DFG+ + + D G + R
Sbjct: 135 ADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
M +PE + G SDV+ FGVVL E+ T L + L
Sbjct: 193 WM------SPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGL 231
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIE 391
++++ L+ +M+ L ++ P + +++ C + PK RPS E++ +++ E+E
Sbjct: 232 SNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE----EME 286
Query: 392 P 392
P
Sbjct: 287 P 287
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV + + H N+V + + +V E+++ G+L + + E +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIATVC 147
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L++LH+ + VI+RD K+ +ILL KLSDFG + ++G
Sbjct: 148 LSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVG 203
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T + APE ++ + D++ G++++EM+ G P F P L
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG-------EPPY------FNEPPLQAM 250
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
RR++ + PR+++ + + L ++ L EP R + +E+L
Sbjct: 251 RRIRDSLPPRVKDLHKVSSVLRGFLDLM--LVREPSQRATAQELL 293
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 126/314 (40%), Gaps = 39/314 (12%)
Query: 67 GDGGDKNMPSSGEIVTPNYLKMFTLQDLRAATKNFRPDTMLGEGGFGRVF--KGWVDHKT 124
GDGG++ + E+ T N T + +NF +LG G +G+VF + H T
Sbjct: 26 GDGGEQLLTVKHELRTAN----LTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDT 81
Query: 125 --LAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLL 182
L + + R+ ++ P LV L + + L
Sbjct: 82 GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-----QSPFLVTLHYAFQTETKLHL 136
Query: 183 VYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL-HSSEKSVIYRDFKASNI 241
+ +Y+ G L HL ++ T ++ I + + L H + +IYRD K NI
Sbjct: 137 ILDYINGGELFTHLSQRERF------TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENI 190
Query: 242 LLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA---TGHLYVKSDVYGF 298
LLD + + L+DFGL+K D + GT Y AP+ V +GH D +
Sbjct: 191 LLDSNGHVVLTDFGLSKEFVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKA-VDWWSL 248
Query: 299 GVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAG 358
GV++ E+LTG + + RR+ K P YP + + LA
Sbjct: 249 GVLMYELLTGASPFTVDGEKNSQAEIS---------RRILKSEPP-----YPQEMSALAK 294
Query: 359 QIIIKCLEAEPKNR 372
+I + L +PK R
Sbjct: 295 DLIQRLLMKDPKKR 308
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 45/241 (18%)
Query: 94 LRAATKNFRPDTMLGEGGFGRVFKG--WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE 151
LR A+ +F +LG+G FG+V K +D + A + L
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE------------EKLST 48
Query: 152 WQAEVKFLGKFSHPNLVKLIGYCWEDRQFL-------------LVYEYMQKGSLENHLFR 198
+EV L +H +V+ E R F+ + EY + +L + +
Sbjct: 49 ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS 108
Query: 199 KGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK 258
+ + RL I A L+++HS + +I+RD K NI +D S N K+ DFGLAK
Sbjct: 109 ENLNQQRDEYWRLFRQILEA--LSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Query: 259 -------LGPID-----GNSHVTTRIMGTYGYAAPEYV-ATGHLYVKSDVYGFGVVLLEM 305
+ +D G+S T +GT Y A E + TGH K D+Y G++ EM
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 306 L 306
+
Sbjct: 225 I 225
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 139
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 140 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 228
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 112/294 (38%), Gaps = 38/294 (12%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVKFLGKF-SH 164
LG G FG+V V+ P + RE +E+K L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT--------------- 209
N+V L+G C L++ EY G L N L RK + +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
L + AK + FL S K+ I+RD A NILL K+ DFGLA+ D N V
Sbjct: 170 LLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 272
Query: 330 SLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
+ + K++ P I+ C +A+P RP+ +++++ ++
Sbjct: 273 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 48/301 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTL-APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG+G FG V++G P S + I+ L E + +F+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE----ASVMKEFNCH 82
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--------PLPWNTRLKIAIDA 217
++V+L+G + + L++ E M +G L+++L R E P + +++A +
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTR 271
A + +L++++ ++RD A N ++ + K+ DFG+ + + D G + R
Sbjct: 142 ADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
M +PE + G SDV+ FGVVL E+ T L + L
Sbjct: 200 WM------SPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGL 238
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIE 391
++++ L+ +M+ L ++ P + +++ C + PK RPS E++ +++ E+E
Sbjct: 239 SNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE----EME 293
Query: 392 P 392
P
Sbjct: 294 P 294
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAEPLPWNTRLKI 213
E++ L + HPNLV L+ R+ LV+EY L E +++G E L + I
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS----I 107
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ + F H + + I+RD K NIL+ KL DFG A+L + G S +
Sbjct: 108 TWQTLQAVNFCH--KHNCIHRDVKPENILITKHSVIKLCDFGFARL--LTGPSDYYDDEV 163
Query: 274 GTYGYAAPEYVATGHLY-VKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
T Y +PE + Y DV+ G V E+L+G+ + L+ L
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLI 223
Query: 333 DKRRL----------KKIMDPR----LEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
+ + KI DP LE ++P + A ++ CL +P R + E++
Sbjct: 224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFP-NISYPALGLLKGCLHMDPTERLTCEQL 282
Query: 379 LE--TLQNISVIEIEPKKKAKARGN 401
L +NI IE K+ K N
Sbjct: 283 LHHPYFENIREIEDLAKEHDKPAEN 307
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ + HP VKL +D + Y + G L ++ + GS + TR A +
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYTA-EIV 139
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
L +LH K +I+RD K NILL+ + +++DFG AK+ + +GT Y
Sbjct: 140 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 279 AAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
+PE + SD++ G ++ +++ GL
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGL 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 48/301 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTL-APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG+G FG V++G P S + I+ L E + +F+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE----ASVMKEFNCH 81
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--------PLPWNTRLKIAIDA 217
++V+L+G + + L++ E M +G L+++L R E P + +++A +
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTR 271
A + +L++++ ++RD A N ++ + K+ DFG+ + + D G + R
Sbjct: 141 ADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
M +PE + G SDV+ FGVVL E+ T L + L
Sbjct: 199 WM------SPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGL 237
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIE 391
++++ L+ +M+ L ++ P + +++ C + PK RPS E++ +++ E+E
Sbjct: 238 SNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE----EME 292
Query: 392 P 392
P
Sbjct: 293 P 293
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L F H N++ + + Y+ + +E L++ + L +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 133 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 236
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 140/320 (43%), Gaps = 48/320 (15%)
Query: 88 MFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTL-APTXXXXXXXXXXXXSNPDSI 146
+F + A + LG+G FG V++G P S + I
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 147 QGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--- 203
+ L E + +F+ ++V+L+G + + L++ E M +G L+++L R E
Sbjct: 65 EFLNE----ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMEN 119
Query: 204 -----PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK 258
P + +++A + A + +L++++ ++RD A N ++ + K+ DFG+ +
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 259 -LGPID-----GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRAL 312
+ D G + R M +PE + G SDV+ FGVVL E+ T
Sbjct: 178 DIYETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVLWEIAT----- 226
Query: 313 DTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNR 372
L + L++++ L+ +M+ L ++ P + +++ C + PK R
Sbjct: 227 ----------LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMR 275
Query: 373 PSMEEVLETLQNISVIEIEP 392
PS E++ +++ E+EP
Sbjct: 276 PSFLEIISSIKE----EMEP 291
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 143/330 (43%), Gaps = 51/330 (15%)
Query: 81 VTPNYLK---MFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTL-APTXXXXXXXX 136
V P Y ++ + A + LG+G FG V++G P
Sbjct: 4 VNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 63
Query: 137 XXXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL 196
S + I+ L E + +F+ ++V+L+G + + L++ E M +G L+++L
Sbjct: 64 NEAASMRERIEFLNE----ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 197 FRKGSAE--------PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN 248
R E P + +++A + A + +L++++ ++RD A N ++ +
Sbjct: 120 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFT 176
Query: 249 AKLSDFGLAK-LGPID-----GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVL 302
K+ DFG+ + + D G + R M +PE + G SDV+ FGVVL
Sbjct: 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWM------SPESLKDGVFTTYSDVWSFGVVL 230
Query: 303 LEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIII 362
E+ T L + L++++ L+ +M+ L ++ P + +++
Sbjct: 231 WEIAT---------------LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMR 274
Query: 363 KCLEAEPKNRPSMEEVLETLQNISVIEIEP 392
C + PK RPS E++ +++ E+EP
Sbjct: 275 MCWQYNPKMRPSFLEIISSIKE----EMEP 300
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 112/294 (38%), Gaps = 38/294 (12%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE-WQAEVKFLGKF-SH 164
LG G FG+V V+ P + RE +E+K L +H
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNT--------------- 209
N+V L+G C L++ EY G L N L RK + +
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVT 269
L + AK + FL S K+ I+RD A NILL K+ DFGLA+ D N V
Sbjct: 165 LLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
+ APE + +SDV+ +G+ L E+ + L P
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYP 267
Query: 330 SLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQ 383
+ + K++ P I+ C +A+P RP+ +++++ ++
Sbjct: 268 GMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L F H N++ + + Y+ + +E L++ + L +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ T +
Sbjct: 133 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 236
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 31/232 (13%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAEP-LPWN 208
+ E+ +P++V G+ +D +V E ++ SL E H RK EP +
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
R I + + +LH++ VI+RD K N+ L+ + K+ DFGLA DG
Sbjct: 148 MRQTI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-- 198
Query: 269 TTRIMGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
+ GT Y APE + GH + + D++ G +L +L G +T+ ++
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTLLVGKPPFETSCLKETYI----- 252
Query: 328 RPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK E P +A +I + L A+P RPS+ E+L
Sbjct: 253 --------RIKKN-----EYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 90/210 (42%), Gaps = 9/210 (4%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
K+ R LG+G FG V +G D + S P+++ ++ EV
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD---DFIREVNA 74
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ H NL++L G +V E GSL + L RK L T + A+ A
Sbjct: 75 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL-RKHQGHFL-LGTLSRYAVQVA 131
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YG 277
+ + +L S K I+RD A N+LL K+ DFGL + P + + V +
Sbjct: 132 EGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 189
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ APE + T SD + FGV L EM T
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 25/227 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ + + +PN+V + + +V EY+ GSL + + E +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVC 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L FLHS++ VI+RD K+ NILL + KL+DFG I + ++G
Sbjct: 124 RECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVG 179
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA-LDTNRPSGEHVLVDFARPSLTD 333
T + APE V K D++ G++ +EM+ G L+ N +++ P L +
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 239
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+L I L +CLE + + R S +E+++
Sbjct: 240 PEKLSAIFRDFLN----------------RCLEMDVEKRGSAKELIQ 270
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 48/301 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTL-APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG+G FG V++G P S + I+ L E + +F+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE----ASVMKEFNCH 81
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--------PLPWNTRLKIAIDA 217
++V+L+G + + L++ E M +G L+++L R E P + +++A +
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTR 271
A + +L++++ ++RD A N ++ + K+ DFG+ + + D G + R
Sbjct: 141 ADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
M +PE + G SDV+ FGVVL E+ T L + L
Sbjct: 199 WM------SPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGL 237
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIE 391
++++ L+ +M+ L ++ P + +++ C + PK RPS E++ +++ E+E
Sbjct: 238 SNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE----EME 292
Query: 392 P 392
P
Sbjct: 293 P 293
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 119/274 (43%), Gaps = 38/274 (13%)
Query: 97 ATKNFRPD---TMLGE-GGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
T++ P+ ++GE G FG+V+K + S + L ++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKA---------QNKETSVLAAAKVIDTKSEEELEDY 54
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E+ L HPN+VKL+ + + ++ E+ G+++ + PL ++++
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLT-ESQIQ 111
Query: 213 IAIDAAKD-LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+ D L +LH ++ +I+RD KA NIL + KL+DFG++ + + + R
Sbjct: 112 VVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAK---NTRTXIQRR 166
Query: 272 --IMGTYGYAAPEYVATGH-----LYVKSDVYGFGVVLLEM---------LTGLRALDTN 315
+GT + APE V K+DV+ G+ L+EM L +R L
Sbjct: 167 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 226
Query: 316 RPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQY 349
S L +R S K LKK ++ ++ ++
Sbjct: 227 AKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARW 260
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 90/210 (42%), Gaps = 9/210 (4%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
K+ R LG+G FG V +G D + S P+++ ++ EV
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD---DFIREVNA 64
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
+ H NL++L G +V E GSL + L RK L T + A+ A
Sbjct: 65 MHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL-RKHQGHFL-LGTLSRYAVQVA 121
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT-YG 277
+ + +L S K I+RD A N+LL K+ DFGL + P + + V +
Sbjct: 122 EGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 179
Query: 278 YAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ APE + T SD + FGV L EM T
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 25/227 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ + + +PN+V + + +V EY+ GSL + + E +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVC 122
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L FLHS++ VI+RD K+ NILL + KL+DFG I + ++G
Sbjct: 123 RECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSEMVG 178
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA-LDTNRPSGEHVLVDFARPSLTD 333
T + APE V K D++ G++ +EM+ G L+ N +++ P L +
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+L I L +CL+ + + R S +E+L+
Sbjct: 239 PEKLSAIFRDFLN----------------RCLDMDVEKRGSAKELLQ 269
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 31/232 (13%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAEP-LPWN 208
+ E+ +P++V G+ +D +V E ++ SL E H RK EP +
Sbjct: 72 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 131
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
R I + + +LH++ VI+RD K N+ L+ + K+ DFGLA DG
Sbjct: 132 MRQTI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-- 182
Query: 269 TTRIMGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
+ GT Y APE + GH + + D++ G +L +L G +T+ ++
Sbjct: 183 KKDLCGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTLLVGKPPFETSCLKETYI----- 236
Query: 328 RPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK E P +A +I + L A+P RPS+ E+L
Sbjct: 237 --------RIKKN-----EYSVPRHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 31/232 (13%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAEP-LPWN 208
+ E+ +P++V G+ +D +V E ++ SL E H RK EP +
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
R I + + +LH++ VI+RD K N+ L+ + K+ DFGLA DG
Sbjct: 148 MRQTI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-- 198
Query: 269 TTRIMGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
+ GT Y APE + GH + + D++ G +L +L G +T+ ++
Sbjct: 199 KKDLCGTPNYIAPEVLCKKGHSF-EVDIWSLGCILYTLLVGKPPFETSCLKETYI----- 252
Query: 328 RPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK E P +A +I + L A+P RPS+ E+L
Sbjct: 253 --------RIKKN-----EYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 107 LGEGGFGRVFKGW---VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
LGEG FG+V +D + D + E + +K +GK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM-MKMIGK-- 99
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
H N++ L+G C +D ++ EY KG+L +L + E + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVT 269
+ A+ + +L S + I+RD A N+L+ + K++DFGLA+ + ID T
Sbjct: 160 VSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + +SDV+ FGV++ E+ T
Sbjct: 218 NGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ +
Sbjct: 135 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+K L +F H N++ + + Y+ + +E L++ + L +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHVTTRIM 273
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++ +
Sbjct: 136 YQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 239
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 111
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 107 LGEGGFGRVFKGW---VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
LGEG FG+V +D + D + E + +K +GK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM-MKMIGK-- 99
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
H N++ L+G C +D ++ EY KG+L +L + E + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVT 269
+ A+ + +L S + I+RD A N+L+ + K++DFGLA+ + ID T
Sbjct: 160 VSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + +SDV+ FGV++ E+ T
Sbjct: 218 NGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 15 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 112
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 212
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 15 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 112
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 212
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 125/285 (43%), Gaps = 28/285 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V++G + + + + S++ E+ E + F+ +
Sbjct: 22 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHH 78
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAE------PLPWNTRLKIAIDAAK 219
+V+L+G + + L+V E M G L+++L + AE P +++A + A
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +L++ K ++RD A N ++ + K+ DFG+ + + + +
Sbjct: 139 GMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 280 APEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK 339
APE + G SD++ FGVVL E+ + L + L++++ LK
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKF 241
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
+MD +Q P ++ C + PK RP+ E++ L++
Sbjct: 242 VMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EYM G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D K++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 111
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EYM G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D K++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 25/227 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ + + +PN+V + + +V EY+ GSL + + E +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVC 122
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L FLHS++ VI+RD K+ NILL + KL+DFG I + ++G
Sbjct: 123 RECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVG 178
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA-LDTNRPSGEHVLVDFARPSLTD 333
T + APE V K D++ G++ +EM+ G L+ N +++ P L +
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+L I L +CL+ + + R S +E+L+
Sbjct: 239 PEKLSAIFRDFLN----------------RCLDMDVEKRGSAKELLQ 269
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 79 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 136
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E L + A A+ + +L S K I+RD A N+L+ K++DFGLA+ +
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 194
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV+L E+ T
Sbjct: 195 IDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 97/229 (42%), Gaps = 26/229 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ + P +V L G E + E ++ GSL + +G LP + L
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC---LPEDRALYYL 191
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILL--DGSYNAKLSDFGLAKLGPIDG--NSHVT- 269
A + L +LHS + +++ D KA N+LL DGS+ A L DFG A DG S +T
Sbjct: 192 GQALEGLEYLHS--RRILHGDVKADNVLLSSDGSH-AALCDFGHAVCLQPDGLGKSLLTG 248
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V K DV+ ++L ML G H F R
Sbjct: 249 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGC-----------HPWTQFFRG 297
Query: 330 SLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
L LK +P + P A L Q I + L EP +R S E+
Sbjct: 298 PLC----LKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 13 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G+ E L EY G L + + P P R + A + +LH
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAG--VVYLHG 121
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 122 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ + DV+ G+VL ML G L ++PS
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 210
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 72 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 129
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E L + A A+ + +L S K I+RD A N+L+ K++DFGLA+ +
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 187
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV+L E+ T
Sbjct: 188 IDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 76 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E L + A A+ + +L S K I+RD A N+L+ K++DFGLA+ +
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 191
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV+L E+ T
Sbjct: 192 IDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 40/291 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V++G + + + + S++ E+ E + F+ +
Sbjct: 24 LGQGSFGMVYEG--NARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHH 80
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAE------PLPWNTRLKIAIDAAK 219
+V+L+G + + L+V E M G L+++L + AE P +++A + A
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTRIM 273
+ +L++ K ++RD A N ++ + K+ DFG+ + + D G + R M
Sbjct: 141 GMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
APE + G SD++ FGVVL E+ + L + L++
Sbjct: 199 ------APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 237
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++ LK +MD +Q P ++ C + PK RP+ E++ L++
Sbjct: 238 EQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 15 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 112
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 15 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G+ E L EY G L + + P P R + A + +LH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAG--VVYLHG 123
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ + DV+ G+VL ML G L ++PS
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 212
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 15 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G+ E L EY G L + + P P R + A + +LH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAG--VVYLHG 123
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ + DV+ G+VL ML G L ++PS
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 212
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E L + A A+ + +L S K I+RD A N+L+ K++DFGLA+ +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV+L E+ T
Sbjct: 203 IDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 15 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G+ E L EY G L + + P P R + A + +LH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAG--VVYLHG 123
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ + DV+ G+VL ML G L ++PS
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 212
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 80 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 137
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E L + A A+ + +L S K I+RD A N+L+ K++DFGLA+ +
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 195
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV+L E+ T
Sbjct: 196 IDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G+ E L EY G L + + P P R + A + +LH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAG--VVYLHG 122
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ + DV+ G+VL ML G L ++PS
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E L + A A+ + +L S K I+RD A N+L+ K++DFGLA+ +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV+L E+ T
Sbjct: 203 IDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G+ E L EY G L + + P P R + A + +LH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAG--VVYLHG 122
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ + DV+ G+VL ML G L ++PS
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 125/285 (43%), Gaps = 28/285 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V++G + + + + S++ E+ E + F+ +
Sbjct: 25 LGQGSFGMVYEG--NARDII-KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAE------PLPWNTRLKIAIDAAK 219
+V+L+G + + L+V E M G L+++L + AE P +++A + A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +L++ K ++RD A N ++ + K+ DFG+ + + + +
Sbjct: 142 GMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 280 APEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK 339
APE + G SD++ FGVVL E+ + L + L++++ LK
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKF 244
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
+MD +Q P ++ C + PK RP+ E++ L++
Sbjct: 245 VMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G+ E L EY G L + + P P R + A + +LH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAG--VVYLHG 122
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ + DV+ G+VL ML G L ++PS
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 35/230 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYM--QKGSLENHLFRKGSAEPLPWNTRLK 212
E+ +H ++V G+ +ED F+ V + ++ LE H RK EP +
Sbjct: 71 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 129
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
I + +LH + VI+RD K N+ L+ K+ DFGLA DG T +
Sbjct: 130 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 181
Query: 273 MGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
GT Y APE ++ GH + + DV+ G ++ +L G +T+ ++
Sbjct: 182 CGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYL--------- 231
Query: 332 TDKRRLKKIMDPRLEEQYPIKGAL--LAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK +Y I + +A +I K L+ +P RP++ E+L
Sbjct: 232 ----RIKK-------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 107 LGEGGFGRVFKGW---VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
LGEG FG+V +D + D + E + +K +GK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM-MKMIGK-- 99
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
H N++ L+G C +D ++ EY KG+L +L + E + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVT 269
+ A+ + +L S + I+RD A N+L+ + K++DFGLA+ + ID + T
Sbjct: 160 VSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + +SDV+ FGV++ E+ T
Sbjct: 218 NGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 15 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G+ E L EY G L + + P P R + A + +LH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAG--VVYLHG 123
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ + DV+ G+VL ML G L ++PS
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 212
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+VK G+ E L EY G L + + P P R + A + +LH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAG--VVYLHG 122
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ + DV+ G+VL ML G L ++PS
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 111
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 111
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 111
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 144
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E L + A A+ + +L S K I+RD A N+L+ K++DFGLA+ +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV+L E+ T
Sbjct: 203 IDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 15 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 112
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 212
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 35/230 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYM--QKGSLENHLFRKGSAEPLPWNTRLK 212
E+ +H ++V G+ +ED F+ V + ++ LE H RK EP +
Sbjct: 67 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 125
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
I + +LH + VI+RD K N+ L+ K+ DFGLA DG T +
Sbjct: 126 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 177
Query: 273 MGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
GT Y APE ++ GH + + DV+ G ++ +L G +T+ ++
Sbjct: 178 CGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYL--------- 227
Query: 332 TDKRRLKKIMDPRLEEQYPIKGAL--LAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK +Y I + +A +I K L+ +P RP++ E+L
Sbjct: 228 ----RIKK-------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 54
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ S++ F SA PLP
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 112 QL--LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 167 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 111
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 35/230 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYM--QKGSLENHLFRKGSAEPLPWNTRLK 212
E+ +H ++V G+ +ED F+ V + ++ LE H RK EP +
Sbjct: 67 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 125
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
I + +LH + VI+RD K N+ L+ K+ DFGLA DG T +
Sbjct: 126 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 177
Query: 273 MGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
GT Y APE ++ GH + + DV+ G ++ +L G +T+ ++
Sbjct: 178 CGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYL--------- 227
Query: 332 TDKRRLKKIMDPRLEEQYPIKGAL--LAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK +Y I + +A +I K L+ +P RP++ E+L
Sbjct: 228 ----RIKK-------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRL 211
+ E+ +H N+VK G+ E L EY G L + + G EP
Sbjct: 52 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP------- 104
Query: 212 KIAIDAAKDLTFLHSSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPID 263
DA + F H V+Y RD K N+LLD N K+SDFGLA + +
Sbjct: 105 ----DAQR---FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 264 GNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
+ ++ GT Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 56
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ S++ F SA PLP
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 114 QL--LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 169 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 55
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 112
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L+F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 113 --LQGLSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LGEG +G V LA ++ + E+ +H N
Sbjct: 14 LGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-GSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VK G+ E L EY G L + + G EP DA + F H
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----------DAQR---FFH 111
Query: 226 SSEKSVIY--------RDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
V+Y RD K N+LLD N K+SDFGLA + + + ++ GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPS 318
Y APE + + + DV+ G+VL ML G L ++PS
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPS 211
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK-------------GSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 128 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E L + A A+ + +L S K I+RD A N+L+ K++DFGLA+ +
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 243
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV+L E+ T
Sbjct: 244 IDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 59
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
L + +HPN+VKL+ + + LV+E++ + + + PLP +
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--L 117
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T Y
Sbjct: 118 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 173
Query: 279 AAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
APE + Y + D++ G + EM+T
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 107 LGEGGFGRVFKGW---VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
LGEG FG+V +D + D + E + +K +GK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEM-MKMIGK-- 99
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
H N++ L+G C +D ++ EY KG+L +L + E + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVT 269
+ A+ + +L S + I+RD A N+L+ + K++DFGLA+ + ID T
Sbjct: 160 VSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + +SDV+ FGV++ E+ T
Sbjct: 218 NGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV+ HPN+++L GY + + L+ EY G++ L + + T +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT-- 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ A L++ HS K VI+RD K N+LL + K++DFG + P S + G
Sbjct: 120 -ELANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSRRDTLCG 172
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T Y PE + K D++ GV+ E L G+ + + T +
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH----------------TYQ 216
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
++I R+E +P A +I + L+ R ++ EVLE
Sbjct: 217 ETYRRI--SRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 54
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ + + F SA PLP
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 111
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ + L F HS V++RD K N+L++ KL+DFGLA+ + ++ T +
Sbjct: 112 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEV 165
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 29/246 (11%)
Query: 148 GLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLEN---HLFRKGSAEP 204
+ E E++ + + HPN+V + LV + + GS+ + H+ KG +
Sbjct: 56 SMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS 115
Query: 205 --LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
L +T I + + L +LH + + I+RD KA NILL + +++DFG++
Sbjct: 116 GVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 263 DGN---SHVTTRIMGTYGYAAPEYVATGHLY-VKSDVYGFGVVLLEMLTGLRALDTNRPS 318
G+ + V +GT + APE + Y K+D++ FG+ +E+ TG P
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM 233
Query: 319 GEHVL-VDFARPSL----TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRP 373
+L + PSL DK LKK ++I CL+ +P+ RP
Sbjct: 234 KVLMLTLQNDPPSLETGVQDKEMLKKYGKS-------------FRKMISLCLQKDPEKRP 280
Query: 374 SMEEVL 379
+ E+L
Sbjct: 281 TAAELL 286
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 98 TKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVK 157
+ +F+ ++LGEG +G V T PT P + LR + E+K
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-----THKPTGEIVAIKKIEPFDKP--LFALRTLR-EIK 61
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
L F H N++ + D Y+ + ++ L R S + L +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPID----------GNSH 267
+ + LH S +VI+RD K SN+L++ + + K+ DFGLA++ ID G
Sbjct: 122 LRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQS 177
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEML 306
T + T Y APE + T Y ++ DV+ G +L E+
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 107 LGEGGFGRVFKGW---VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
LGEG FG+V +D + D + E + +K +GK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM-MKMIGK-- 99
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
H N++ L+G C +D ++ EY KG+L +L + E + +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVT 269
+ A+ + +L S + I+RD A N+L+ + K++DFGLA+ + ID T
Sbjct: 160 VSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + +SDV+ FGV++ E+ T
Sbjct: 218 NGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 15/216 (6%)
Query: 96 AATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAE 155
+++ F+ LG G + V+KG +KT P + +RE
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPST--AIRE---- 53
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEP--LPWNTRLKI 213
+ + + H N+V+L + + LV+E+M + R P L N
Sbjct: 54 ISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ L F H E +++RD K N+L++ KL DFGLA+ I N+ + +
Sbjct: 114 QWQLLQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV- 170
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
T Y AP+ + Y S D++ G +L EM+TG
Sbjct: 171 -TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 55
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ S++ F SA PLP
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLF 112
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 113 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 168 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 40/291 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V++G + + + + S++ E+ E + F+ +
Sbjct: 25 LGQGSFGMVYEG--NARDII-KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAE------PLPWNTRLKIAIDAAK 219
+V+L+G + + L+V E M G L+++L + AE P +++A + A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTRIM 273
+ +L++ K ++RD A N ++ + K+ DFG+ + + D G + R M
Sbjct: 142 GMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
APE + G SD++ FGVVL E+ + L + L++
Sbjct: 200 ------APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++ LK +MD +Q P ++ C + PK RP+ E++ L++
Sbjct: 239 EQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 56
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ S++ F SA PLP
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLF 113
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 114 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 169 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 95/229 (41%), Gaps = 26/229 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ + P +V L G E + E ++ GSL + +G LP + L
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC---LPEDRALYYL 172
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILL--DGSYNAKLSDFGLAKLGPIDG---NSHVT 269
A + L +LHS + +++ D KA N+LL DGS+ A L DFG A DG +
Sbjct: 173 GQALEGLEYLHS--RRILHGDVKADNVLLSSDGSH-AALCDFGHAVCLQPDGLGKDLLTG 229
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V K DV+ ++L ML G H F R
Sbjct: 230 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGC-----------HPWTQFFRG 278
Query: 330 SLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
L LK +P + P A L Q I + L EP +R S E+
Sbjct: 279 PLC----LKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 93 DLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREW 152
D+++ K + LGEG F V+K K D I R
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGIN--RTA 59
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E+K L + SHPN++ L+ LV+++M+ LE + + S P + +
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEV-IIKDNSLVLTPSHIKAY 117
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL--GPIDGNSH-VT 269
+ + + L +LH + +++RD K +N+LLD + KL+DFGLAK P H V
Sbjct: 118 MLM-TLQGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 270 TRIMGTYGYAAPEYVATGHLY-VKSDVYGFGVVLLEML 306
TR Y APE + +Y V D++ G +L E+L
Sbjct: 175 TR-----WYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 134/301 (44%), Gaps = 48/301 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTL-APTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
LG+G FG V++G P S + I+ L E + +F+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE----ASVMKEFNCH 75
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--------PLPWNTRLKIAIDA 217
++V+L+G + + L++ E M +G L+++L R E P + +++A +
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTR 271
A + +L++++ ++RD A N + + K+ DFG+ + + D G + R
Sbjct: 135 ADGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
M +PE + G SDV+ FGVVL E+ T L + L
Sbjct: 193 WM------SPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGL 231
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIE 391
++++ L+ +M+ L ++ P + +++ C + PK RPS E++ +++ E+E
Sbjct: 232 SNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE----EME 286
Query: 392 P 392
P
Sbjct: 287 P 287
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 98 TKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVK 157
+ +F+ ++LGEG +G V T PT P + LR + E+K
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-----THKPTGEIVAIKKIEPFDKP--LFALRTLR-EIK 61
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
L F H N++ + D Y+ + ++ L R S + L +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPID----------GNSH 267
+ + LH S +VI+RD K SN+L++ + + K+ DFGLA++ ID G
Sbjct: 122 LRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQS 177
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEML 306
T + T Y APE + T Y ++ DV+ G +L E+
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-----FRKGSAEPLPWNT 209
E+K L +F H N++ + D E M+ L HL ++ + L +
Sbjct: 91 EIKILLRFRHENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDH 145
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG-PIDGNSHV 268
+ L ++HS+ +V++RD K SN+LL+ + + K+ DFGLA++ P ++
Sbjct: 146 ICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 203
Query: 269 TTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRP--SGEHVL 323
T + T Y APE + Y KS D++ G +L EML +NRP G+H L
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-------SNRPIFPGKHYL 254
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 29/245 (11%)
Query: 149 LREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLEN---HLFRKGSAEP- 204
+ E E++ + + HPN+V + LV + + GS+ + H+ KG +
Sbjct: 52 MDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 111
Query: 205 -LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPID 263
L +T I + + L +LH + + I+RD KA NILL + +++DFG++
Sbjct: 112 VLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 169
Query: 264 GN---SHVTTRIMGTYGYAAPEYVATGHLY-VKSDVYGFGVVLLEMLTGLRALDTNRPSG 319
G+ + V +GT + APE + Y K+D++ FG+ +E+ TG P
Sbjct: 170 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK 229
Query: 320 EHVL-VDFARPSL----TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPS 374
+L + PSL DK LKK ++I CL+ +P+ RP+
Sbjct: 230 VLMLTLQNDPPSLETGVQDKEMLKKYGKS-------------FRKMISLCLQKDPEKRPT 276
Query: 375 MEEVL 379
E+L
Sbjct: 277 AAELL 281
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 140 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 197
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E + + + A+ + +L S + I+RD A N+L+ + K++DFGLA+ +
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINN 255
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV++ E+ T
Sbjct: 256 IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 55
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 112
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 113 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 54
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 111
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 112 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 54
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 111
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 112 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 55
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
L + +HPN+VKL+ + + LV+E++ + + + PLP +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--L 113
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWY 169
Query: 279 AAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
APE + Y + D++ G + EM+T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 125/285 (43%), Gaps = 28/285 (9%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V++G + + + + S++ E+ E + F+ +
Sbjct: 25 LGQGSFGMVYEG--NARDII-KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAE------PLPWNTRLKIAIDAAK 219
+V+L+G + + L+V E M G L+++L + AE P +++A + A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+ +L++ K ++RD A N ++ + K+ DFG+ + + + +
Sbjct: 142 GMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 280 APEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK 339
APE + G SD++ FGVVL E+ + L + L++++ LK
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKF 244
Query: 340 IMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
+MD +Q P ++ C + PK RP+ E++ L++
Sbjct: 245 VMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 25/227 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ + + +PN+V + + +V EY+ GSL + + E +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVC 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L FLHS++ VI+R+ K+ NILL + KL+DFG I + ++G
Sbjct: 124 RECLQALEFLHSNQ--VIHRNIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVG 179
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRA-LDTNRPSGEHVLVDFARPSLTD 333
T + APE V K D++ G++ +EM+ G L+ N +++ P L +
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 239
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+L I L +CLE + + R S +E+++
Sbjct: 240 PEKLSAIFRDFLN----------------RCLEMDVEKRGSAKELIQ 270
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 107 LGEGGFGRVFKGW---VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
LGEG FG+V +D + D + E + +K +GK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM-MKMIGK-- 99
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
H N++ L+G C +D ++ EY KG+L +L + E + +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVT 269
+ A+ + +L S + I+RD A N+L+ + K++DFGLA+ + ID T
Sbjct: 160 VSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + +SDV+ FGV++ E+ T
Sbjct: 218 NGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALXKIRLDTETEGVPSTAIR----EISL 55
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 112
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 113 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALXKIRLDTETEGVPSTAIR----EISL 54
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 111
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 112 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G AEP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 86 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 143
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E + + + A+ + +L S + I+RD A N+L+ + K++DFGLA+ +
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINN 201
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV++ E+ T
Sbjct: 202 IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 47/300 (15%)
Query: 107 LGEGGFGRVFKGWV----DHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKF 162
LG+G F ++FKG D+ L T + +S ++A + K
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF-----FEA-ASMMSKL 69
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
SH +LV G C+ + +LV E+++ GSL+ +L + + + W +L++A A +
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMH 127
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR----IMGTYGY 278
FL E ++I+ + A NILL + K + KL D +T + +
Sbjct: 128 FL--EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS--DPGISITVLPKDILQERIPW 183
Query: 279 AAPEYVAT-GHLYVKSDVYGFGVVLLEMLTG----LRALDTNRPSGEHVLVDFARPSLTD 333
PE + +L + +D + FG L E+ +G L ALD+
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS------------------- 224
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIEPK 393
+R+L+ D Q P A +I C++ EP +RPS ++ L ++ ++ P+
Sbjct: 225 QRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 31/238 (13%)
Query: 149 LREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGS-LENHLFRKGSAEPLPW 207
+ + +AE++ L HPN++K+ + +V E + G LE + + + L
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 208 NTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILL-DGSYNA--KLSDFGLAKLGPIDG 264
++ L + HS + V+++D K NIL D S ++ K+ DFGLA+L D
Sbjct: 124 GYVAELMKQMMNALAYFHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181
Query: 265 NSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLV 324
+S T GT Y APE V + K D++ GVV+ +LTG +
Sbjct: 182 HS---TNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG--------------CL 223
Query: 325 DFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQ---IIIKCLEAEPKNRPSMEEVL 379
F SL + ++ +P Y ++ L Q ++ + L +P+ RPS +VL
Sbjct: 224 PFTGTSLEEVQQKATYKEPN----YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 83 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 140
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E + + + A+ + +L S + I+RD A N+L+ + K++DFGLA+ +
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINN 198
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV++ E+ T
Sbjct: 199 IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 62
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 120 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 173
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 104 DTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
D +G G F V+KG +D +T S + ++ E + L
Sbjct: 31 DIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSER------QRFKEEAEXLKGLQ 83
Query: 164 HPNLVKLIGYCWED-----RQFLLVYEYMQKGSLENHL--FRKGSAEPL-PWNTRLKIAI 215
HPN+V+ WE + +LV E G+L+ +L F+ + L W ++
Sbjct: 84 HPNIVRFYD-SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI---- 138
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDG-SYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
K L FLH+ +I+RD K NI + G + + K+ D GLA L + ++G
Sbjct: 139 --LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIG 192
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
T + APE Y +S DVY FG LE T
Sbjct: 193 TPEFXAPEXYE--EKYDESVDVYAFGXCXLEXATS 225
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 55
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 112
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 113 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 398 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 452
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 453 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLE 508
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 509 S--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 56
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ + + F SA PLP
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLF 113
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 114 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 169 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 156 VKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSA 202
+K +GK H N++ L+G C +D ++ EY KG+L +L +
Sbjct: 81 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 138
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGP 261
E + + + A+ + +L S + I+RD A N+L+ + K++DFGLA+ +
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLTARNVLVTENNVMKIADFGLARDINN 196
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
ID T + + APE + +SDV+ FGV++ E+ T
Sbjct: 197 IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D K++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 54
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 112 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 62
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGT 275
+ L F HS V++RD K N+L++ KL+DFGLA+ + ++ T + T
Sbjct: 120 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 173
Query: 276 YGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
Y APE + Y + D++ G + EM+T
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 107 LGEGGFGRVFKGW---VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
LGEG FG+V +D + D + E + +K +GK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM-MKMIGK-- 99
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
H N++ L+G C +D ++ EY KG+L +L + E + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVT 269
+ A+ + +L S + I+RD A N+L+ + +++DFGLA+ + ID T
Sbjct: 160 VSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + +SDV+ FGV++ E+ T
Sbjct: 218 NGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 53
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ + + F SA PLP
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 110
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 111 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 166 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 40/291 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V++G + + + + S++ E+ E + F+ +
Sbjct: 25 LGQGSFGMVYEG--NARDII-KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAE------PLPWNTRLKIAIDAAK 219
+V+L+G + + L+V E M G L+++L + AE P +++A + A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTRIM 273
+ +L++ K ++RD A N ++ + K+ DFG+ + + D G + R M
Sbjct: 142 GMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
APE + G SD++ FGVVL E+ + L + L++
Sbjct: 200 ------APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++ LK +MD +Q P ++ C + P RP+ E++ L++
Sbjct: 239 EQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYM--QKGSLENHLFRKGSAEPLPWNTRLK 212
E+ +H ++V G+ +ED F+ V + ++ LE H RK EP +
Sbjct: 91 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 149
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
I + +LH + VI+RD K N+ L+ K+ DFGLA DG +
Sbjct: 150 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--L 201
Query: 273 MGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
GT Y APE ++ GH + + DV+ G ++ +L G +T+ ++
Sbjct: 202 CGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYL--------- 251
Query: 332 TDKRRLKKIMDPRLEEQYPIKGAL--LAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK +Y I + +A +I K L+ +P RP++ E+L
Sbjct: 252 ----RIKK-------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D K++DFGLAK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYM--QKGSLENHLFRKGSAEPLPWNTRLK 212
E+ +H ++V G+ +ED F+ V + ++ LE H RK EP +
Sbjct: 89 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 147
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
I + +LH + VI+RD K N+ L+ K+ DFGLA DG +
Sbjct: 148 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--L 199
Query: 273 MGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
GT Y APE ++ GH + + DV+ G ++ +L G +T+ ++
Sbjct: 200 CGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYL--------- 249
Query: 332 TDKRRLKKIMDPRLEEQYPIKGAL--LAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK +Y I + +A +I K L+ +P RP++ E+L
Sbjct: 250 ----RIKK-------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 53
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L + +HPN+VKL+ + + LV+E++ + + + PLP +
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQL- 112
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIMG 274
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 113 -LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---- 165
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 54
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ + + F SA PLP
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 111
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 112 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 167 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 54
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L + +HPN+VKL+ + + LV+E++ + + + PLP +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL- 113
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIMG 274
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 114 -LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---- 166
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 53
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ + + F SA PLP
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 110
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 111 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 166 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 55
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L + +HPN+VKL+ + + LV+E++ + + + PLP +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL- 114
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIMG 274
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 115 -LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---- 167
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 127/300 (42%), Gaps = 47/300 (15%)
Query: 107 LGEGGFGRVFKGWV----DHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKF 162
LG+G F ++FKG D+ L T + +S ++A + K
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF-----FEA-ASMMSKL 69
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
SH +LV G C + +LV E+++ GSL+ +L + + + W +L++A A +
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMH 127
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR----IMGTYGY 278
FL E ++I+ + A NILL + K + KL D +T + +
Sbjct: 128 FL--EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS--DPGISITVLPKDILQERIPW 183
Query: 279 AAPEYVAT-GHLYVKSDVYGFGVVLLEMLTG----LRALDTNRPSGEHVLVDFARPSLTD 333
PE + +L + +D + FG L E+ +G L ALD+
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS------------------- 224
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNISVIEIEPK 393
+R+L+ D Q P A +I C++ EP +RPS ++ L ++ ++ P+
Sbjct: 225 QRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 53
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ + + F SA PLP
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 110
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 111 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 166 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 136/316 (43%), Gaps = 66/316 (20%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G +G V++G +++A S+ D RE E+ H N
Sbjct: 16 VGKGRYGEVWRGLWHGESVA----------VKIFSSRDEQSWFRE--TEIYNTVLLRHDN 63
Query: 167 LVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
++ I R Q L+ Y + GSL + L R+ + EP + L++A+ AA L
Sbjct: 64 ILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ-TLEP---HLALRLAVSAACGLA 119
Query: 223 FLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP-------IDGNSHVT 269
LH + ++ +RDFK+ N+L+ + ++D GLA + I N V
Sbjct: 120 HLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV- 178
Query: 270 TRIMGTYGYAAPEYV------ATGHLYVKSDVYGFGVVLLE-----MLTGLRALDTNRPS 318
GT Y APE + Y +D++ FG+VL E ++ G+ ++ RP
Sbjct: 179 ----GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGI--VEDYRPP 232
Query: 319 GEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLA--------GQIIIKCLEAEPK 370
V+ + PS D +KK++ +++Q P LA Q++ +C P
Sbjct: 233 FYDVVPN--DPSFED---MKKVVC--VDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPS 285
Query: 371 NRPSMEEVLETLQNIS 386
R + + +TLQ IS
Sbjct: 286 ARLTALRIKKTLQKIS 301
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 57
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L + +HPN+VKL+ + + LV+E++ + + + PLP +
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL- 116
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIMG 274
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 117 -LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---- 169
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 56
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L + +HPN+VKL+ + + LV+E++ + + + PLP +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL- 115
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIMG 274
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 116 -LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---- 168
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 53
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ + + F SA PLP
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 110
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 111 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 166 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 56
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ + + F SA PLP
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 113
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 114 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 169 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 55
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKI 213
L + +HPN+VKL+ + + LV+E++ + + F SA PLP
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 112
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTR 271
+ + L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 113 QL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 272 IMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 168 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 55
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L + +HPN+VKL+ + + LV+E++ + + + PLP +
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL- 114
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIMG 274
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 115 -LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---- 167
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 54
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 111
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIM 273
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 112 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--- 164
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 98 TKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVK 157
+ +F+ ++LGEG +G V T PT P + LR + E+K
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-----THKPTGEIVAIKKIEPFDKP--LFALRTLR-EIK 61
Query: 158 FLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDA 217
L F H N++ + D Y+ + ++ L R S + L +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 218 AKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPID----------GNSH 267
+ + LH S +VI+RD K SN+L++ + + K+ DFGLA++ ID G
Sbjct: 122 LRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQS 177
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEML 306
+ T Y APE + T Y ++ DV+ G +L E+
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 398 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 452
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 453 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLE 508
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 509 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 72
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 73 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 167
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 168 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKG---ATWTLC 220
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 167
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 168 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 220
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 54
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 111
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIM 273
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 112 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--- 164
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 99 KNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+NF+ +GEG +G V+K L + +R E+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EISL 56
Query: 159 LGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE---PLPWNTRLKIAI 215
L + +HPN+VKL+ + + LV+E++ + + F SA PLP +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQL 113
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIM 273
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 114 --LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--- 166
Query: 274 GTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYM--QKGSLENHLFRKGSAEPLPWNTRLK 212
E+ +H ++V G+ +ED F+ V + ++ LE H RK EP +
Sbjct: 65 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 123
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
I + +LH + VI+RD K N+ L+ K+ DFGLA DG +
Sbjct: 124 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--L 175
Query: 273 MGTYGYAAPEYVA-TGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
GT Y APE ++ GH + + DV+ G ++ +L G +T+ ++
Sbjct: 176 CGTPNYIAPEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYL--------- 225
Query: 332 TDKRRLKKIMDPRLEEQYPIKGAL--LAGQIIIKCLEAEPKNRPSMEEVL 379
R+KK +Y I + +A +I K L+ +P RP++ E+L
Sbjct: 226 ----RIKK-------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGS-AEPLPWNTRLK 212
E + L + P LVKL Y ++D L +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF- 145
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXL 198
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGS-AEPLPWNTRLK 212
E + L + P LVKL Y ++D L +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF- 145
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXL 198
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFL-LVYEYMQKGSLENHLFRKGS-AEPLPWNTRLK 212
E + L + P LVKL Y ++D L +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF- 145
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXL 198
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLX 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLA 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L HPN++KL + + F LV E+ + G L + + + +K
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKLSDFGLAKLGPIDGNSHVTTR 271
+ + +LH ++++RD K NILL+ N K+ DFGL+ D +
Sbjct: 156 LSG---ICYLHKH--NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRD 207
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+GT Y APE V K DV+ GV++ +L G
Sbjct: 208 RLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWTLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 139
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 140 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 192
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G EP + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-Y 167
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 168 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 220
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY G + +HL R G +EP + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D K++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D +++DFGLAK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G + P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D K++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++KL + + R + LV E + G L + + + + +K
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 113
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDG-SYNA--KLSDFGLAKLGPIDGNSHVTTR 271
+ T+LH + ++++RD K N+LL+ S +A K+ DFGL+ + G
Sbjct: 114 LSGT---TYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKE 165
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
+GT Y APE V K DV+ GV+L +L G P G
Sbjct: 166 RLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGY------PPFGGQ---------- 208
Query: 332 TDKRRLKKIMDPRLEEQYP--IKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
TD+ LK++ + P + + A Q++ L EP R S EE L
Sbjct: 209 TDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEAL 258
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 133
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 134 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAK--RVKGR---TWXLC 186
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 21 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 75
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 76 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLE 131
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 132 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 188
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 189 FRRFTSASDVWMFGVCMWEIL 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 23/218 (10%)
Query: 107 LGEGGFGRVFKGW---VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
LGEG FG+V +D + D + E + +K +GK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM-MKMIGK-- 99
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
H N++ L+G C +D ++ Y KG+L +L + E + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVT 269
+ A+ + +L S + I+RD A N+L+ + K++DFGLA+ + ID T
Sbjct: 160 VSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + +SDV+ FGV++ E+ T
Sbjct: 218 NGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 15 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 69
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 70 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLE 125
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 126 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 182
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 183 FRRFTSASDVWMFGVCMWEIL 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 88 MFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQ 147
MF + ++ +LG+G FG V K D
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKES 96
Query: 148 GLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF-RKGSAEPLP 206
LRE V+ L + HPN++KL + + F LV E G L + + RK +E
Sbjct: 97 LLRE----VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-- 150
Query: 207 WNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKLSDFGLAKLGPID 263
+I +T++H ++ +++RD K N+LL+ N ++ DFGL+ +
Sbjct: 151 --DAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLST--HFE 204
Query: 264 GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ + +I GT Y APE V G K DV+ GV+L +L+G
Sbjct: 205 ASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-Y 132
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 133 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWTLC 185
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 20 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 74
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 75 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLE 130
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 131 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 187
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 188 FRRFTSASDVWMFGVCMWEIL 208
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 88 MFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQ 147
MF + ++ +LG+G FG V K D
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKES 95
Query: 148 GLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF-RKGSAEPLP 206
LRE V+ L + HPN++KL + + F LV E G L + + RK +E
Sbjct: 96 LLRE----VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-- 149
Query: 207 WNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKLSDFGLAKLGPID 263
+I +T++H ++ +++RD K N+LL+ N ++ DFGL+ +
Sbjct: 150 --DAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLST--HFE 203
Query: 264 GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ + +I GT Y APE V G K DV+ GV+L +L+G
Sbjct: 204 ASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 106 MLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
+LGEG FG V++G + +HK N + ++ +E + H
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE------KFMSEAVIMKNLDH 84
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKDLTF 223
P++VKLIG E+ ++++ E G L ++L R K S + L T + ++ K + +
Sbjct: 85 PHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAY 140
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVTTRIMGTYGYAAPE 282
L S + ++RD NIL+ KL DFGL++ + D TR+ + +PE
Sbjct: 141 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPE 196
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ SDV+ F V + E+L+
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILS 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 46 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 100
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 101 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLE 156
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 157 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 213
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 214 FRRFTSASDVWMFGVCMWEIL 234
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 106 MLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
+LGEG FG V++G + +HK N + ++ +E + H
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE------KFMSEAVIMKNLDH 72
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKDLTF 223
P++VKLIG E+ ++++ E G L ++L R K S + L T + ++ K + +
Sbjct: 73 PHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAY 128
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVTTRIMGTYGYAAPE 282
L S + ++RD NIL+ KL DFGL++ + D TR+ + +PE
Sbjct: 129 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPE 184
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ SDV+ F V + E+L+
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILS 209
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E++ HPN+++L Y ++ R+ L+ EY +G L L + + + T ++
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEEL 132
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
DA L + H K VI+RD K N+LL K++DFG + P S + G
Sbjct: 133 ADA---LMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAP----SLRRKTMCG 183
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
T Y PE + K D++ GV+ E+L G
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN-------KEILDEA 102
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 103 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 156
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 157 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 106 MLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
+LGEG FG V++G + +HK N + ++ +E + H
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE------KFMSEAVIMKNLDH 68
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKDLTF 223
P++VKLIG E+ ++++ E G L ++L R K S + L T + ++ K + +
Sbjct: 69 PHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAY 124
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVTTRIMGTYGYAAPE 282
L S + ++RD NIL+ KL DFGL++ + D TR+ + +PE
Sbjct: 125 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPE 180
Query: 283 YVATGHLYVKSDVYGFGVVLLEMLT 307
+ SDV+ F V + E+L+
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILS 205
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 23 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 77
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 78 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLE 133
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 134 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 190
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 191 FRRFTSASDVWMFGVCMWEIL 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 72
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 73 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 72
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 73 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW----- 126
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 127 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G EP + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G EP + R
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-Y 141
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 142 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 194
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 72
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 73 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D + ++ + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 88 MFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQ 147
MF + ++ +LG+G FG V K D
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 148 GLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF-RKGSAEPLP 206
LRE V+ L + HPN++KL + + F LV E G L + + RK +E
Sbjct: 73 LLRE----VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-- 126
Query: 207 WNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKLSDFGLAKLGPID 263
+I +T++H ++ +++RD K N+LL+ N ++ DFGL+ +
Sbjct: 127 --DAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLST--HFE 180
Query: 264 GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ + +I GT Y APE V G K DV+ GV+L +L+G
Sbjct: 181 ASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG FG V +G + P S DS++ ++ E + +F HP+
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTS--DSVR--EKFLQEALTMRQFDHPH 72
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHL-FRKGSAEPLPWNTRLKIAIDAAKDLTFLH 225
+VKLIG E+ ++++ E G L + L RK S L + + A + L +L
Sbjct: 73 IVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLE 128
Query: 226 SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVA 285
S K ++RD A N+L+ + KL DFGL++ D ++ + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESIN 185
Query: 286 TGHLYVKSDVYGFGVVLLEML 306
SDV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 97 ATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
+ +NF+ +GEG +G V+K L + +R E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 56
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAID 216
L + +HPN+VKL+ + + LV+E++ + + + PLP +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQL- 115
Query: 217 AAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLG--PIDGNSHVTTRIMG 274
+ L F HS V++RD K N+L++ KL+DFGLA+ P+ H
Sbjct: 116 -LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---- 168
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T Y APE + Y + D++ G + EM+T
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 45/241 (18%)
Query: 94 LRAATKNFRPDTMLGEGGFGRVFKG--WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLRE 151
LR A+ +F +LG+G FG+V K +D + A + L
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE------------EKLST 48
Query: 152 WQAEVKFLGKFSHPNLVKLIGYCWEDRQFL-------------LVYEYMQKGSLENHLFR 198
+EV L +H +V+ E R F+ + EY + +L + +
Sbjct: 49 ILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS 108
Query: 199 KGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK 258
+ + RL I A L+++HS + +I+R+ K NI +D S N K+ DFGLAK
Sbjct: 109 ENLNQQRDEYWRLFRQILEA--LSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
Query: 259 -------LGPID-----GNSHVTTRIMGTYGYAAPEYV-ATGHLYVKSDVYGFGVVLLEM 305
+ +D G+S T +GT Y A E + TGH K D Y G++ E
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEX 224
Query: 306 L 306
+
Sbjct: 225 I 225
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L HPN++KL + + R + LV E + G L + + + + +K
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNSHVTTR 271
+ +T+LH + ++++RD K N+LL+ K+ DFGL+ + N
Sbjct: 146 LSG---VTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKE 197
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+GT Y APE V K DV+ GV+L +L G
Sbjct: 198 RLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 68
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 69 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW----- 122
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 123 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 71
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 72 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW----- 125
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 126 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L K H N+V L LV + + G L + + KG +T ++
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQV 129
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILL---DGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+DA + +LH +++RD K N+L D +SDFGL+K+ +G V +
Sbjct: 130 LDA---VYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMST 181
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY APE +A D + GV+ +L G
Sbjct: 182 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G EP + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-Y 139
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 140 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 192
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 69
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 70 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW----- 123
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 124 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ AK + FL S + I+RD A NILL K+ DFGLA+ D +
Sbjct: 206 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
+ APE + ++SDV+ FGV+L E+ + L + G + +F R L +
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR-RLKE 318
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
R++ D E Y Q ++ C EP RP+ E++E L N+
Sbjct: 319 GTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 70
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 71 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW----- 124
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 125 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKIAIDAAKDLTF 223
P LVKL ++ +V EY G + +HL R G +EP + R A +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEY 157
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS + +IYRD K N+L+D K++DFG AK + G T + GT Y APE
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGR---TWXLCGTPEYLAPEI 210
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
+ + D + GV++ EM G ++P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY G + +HL R G EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D K++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 78
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 79 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 132
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 133 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G +G V+K +D +T ++ D+ + RE + G H N
Sbjct: 17 LGKGAYGIVWKS-IDRRT--GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG---HEN 70
Query: 167 LVKLIGYCW--EDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+V L+ DR LV++YM+ + + R EP+ + + K + +L
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDL--HAVIRANILEPV---HKQYVVYQLIKVIKYL 125
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-------------------LGPIDGN 265
HS +++RD K SNILL+ + K++DFGL++ D +
Sbjct: 126 HSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
+ T + T Y APE + Y K D++ G +L E+L G
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ AK + FL S + I+RD A NILL K+ DFGLA+ D +
Sbjct: 197 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
+ APE + ++SDV+ FGV+L E+ + L + G + +F R L +
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR-RLKE 309
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
R++ D E Y Q ++ C EP RP+ E++E L N+
Sbjct: 310 GTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ AK + FL S + I+RD A NILL K+ DFGLA+ D +
Sbjct: 199 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
+ APE + ++SDV+ FGV+L E+ + L + G + +F R L +
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR-RLKE 311
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
R++ D E Y Q ++ C EP RP+ E++E L N+
Sbjct: 312 GTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 74
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 75 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 128
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 129 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+ AK + FL S + I+RD A NILL K+ DFGLA+ D +
Sbjct: 204 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
+ APE + ++SDV+ FGV+L E+ + L + G + +F R L +
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR-RLKE 316
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQNI 385
R++ D E Y Q ++ C EP RP+ E++E L N+
Sbjct: 317 GTRMRA-PDYTTPEMY---------QTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 75
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 76 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 129
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 130 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ +M G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 71
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 72 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 125
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 126 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 70
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 71 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 124
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 125 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 82/218 (37%), Gaps = 14/218 (6%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+LG GGFG VF + +G + E K L K H
Sbjct: 192 VLGRGGFGEVFACQMK------ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK-VHS 244
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+ + Y +E + LV M G + H++ P R I A
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTAQIVSGLE 303
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYV 284
H ++++IYRD K N+LLD N ++SD GLA + T GT G+ APE +
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV--ELKAGQTKTKGYAGTPGFMAPELL 361
Query: 285 ATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
D + GV L EM+ A R GE V
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIA---ARGPFRARGEKV 396
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 105/254 (41%), Gaps = 43/254 (16%)
Query: 155 EVKFLGKFS-HPNLVKL-----IGYCWEDR---QFLLVYEYMQKGSLENHLFRKGSAEPL 205
EV F+ K S HPN+V+ IG D +FLL+ E + KG L L + S PL
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE-LCKGQLVEFLKKMESRGPL 133
Query: 206 PWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL------ 259
+T LKI + + +H + +I+RD K N+LL KL DFG A
Sbjct: 134 SCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPD 193
Query: 260 --GPIDGNSHVTTRIM--GTYGYAAPEYV---ATGHLYVKSDVYGFGVVLLEMLTGLRAL 312
+ V I T Y PE + + + K D++ G +L L R
Sbjct: 194 YSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL--YLLCFR-- 249
Query: 313 DTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNR 372
+H D A+ + + K P + QY + +L+ L+ P+ R
Sbjct: 250 -------QHPFEDGAKLRIVN----GKYSIPPHDTQYTVFHSLIRAM-----LQVNPEER 293
Query: 373 PSMEEVLETLQNIS 386
S+ EV+ LQ I+
Sbjct: 294 LSIAEVVHQLQEIA 307
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 88 MFTLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQ 147
MF + ++ +LG+G FG V K D
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKES 78
Query: 148 GLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF-RKGSAEPLP 206
LRE V+ L + HPN++KL + + F LV E G L + + RK +E
Sbjct: 79 LLRE----VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-- 132
Query: 207 WNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS---YNAKLSDFGLAKLGPID 263
+I +T++H ++ +++RD K N+LL+ N ++ DFGL+ +
Sbjct: 133 --DAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLS--THFE 186
Query: 264 GNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ + +I GT Y APE V G K DV+ GV+L +L+G
Sbjct: 187 ASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 93
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 94 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 147
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 148 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 212 KIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
KI + K L L + K +I+RD K SNILLD S N KL DFG++ G + +S TR
Sbjct: 129 KITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGIS--GQL-VDSIAKTR 184
Query: 272 IMGTYGYAAPEYV---ATGHLY-VKSDVYGFGVVLLEMLTG 308
G Y APE + A+ Y V+SDV+ G+ L E+ TG
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 71
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 72 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 125
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 126 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 23/218 (10%)
Query: 107 LGEGGFGRVFKGW---VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS 163
LGEG FG+V +D + D + E + +K +GK
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM-MKMIGK-- 99
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL-------------FRKGSAEPLPWNTR 210
H N++ L+G C +D ++ Y KG+L +L + E + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVT 269
+ A+ + +L S + I+RD A N+L+ + K++DFGLA+ + ID T
Sbjct: 160 VSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ + APE + +SDV+ FGV++ E+ T
Sbjct: 218 NGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 71
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 72 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 125
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 126 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 69
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 70 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW----- 123
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 124 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 68
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 69 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 122
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 123 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 82/218 (37%), Gaps = 14/218 (6%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+LG GGFG VF + +G + E K L K H
Sbjct: 192 VLGRGGFGEVFACQMK------ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK-VHS 244
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+ + Y +E + LV M G + H++ P R I A
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTAQIVSGLE 303
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYV 284
H ++++IYRD K N+LLD N ++SD GLA + T GT G+ APE +
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV--ELKAGQTKTKGYAGTPGFMAPELL 361
Query: 285 ATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
D + GV L EM+ A R GE V
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIA---ARGPFRARGEKV 396
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 82/218 (37%), Gaps = 14/218 (6%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+LG GGFG VF + +G + E K L K H
Sbjct: 192 VLGRGGFGEVFACQMK------ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK-VHS 244
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+ + Y +E + LV M G + H++ P R I A
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTAQIVSGLE 303
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYV 284
H ++++IYRD K N+LLD N ++SD GLA + T GT G+ APE +
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV--ELKAGQTKTKGYAGTPGFMAPELL 361
Query: 285 ATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
D + GV L EM+ A R GE V
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIA---ARGPFRARGEKV 396
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 127/291 (43%), Gaps = 40/291 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V++G + + + + S++ E+ E + F+ +
Sbjct: 26 LGQGSFGMVYEG--NARDII-KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 82
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAE------PLPWNTRLKIAIDAAK 219
+V+L+G + + L+V E M G L+++L + AE P +++A + A
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTRIM 273
+ +L++ K ++R+ A N ++ + K+ DFG+ + + D G + R M
Sbjct: 143 GMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
APE + G SD++ FGVVL E+ + L + L++
Sbjct: 201 ------APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 239
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++ LK +MD +Q P ++ C + P RP+ E++ L++
Sbjct: 240 EQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 21/224 (9%)
Query: 91 LQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLR 150
++ L+ +++ ++G G FG V V HK DS
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEV--QLVRHKASQKVYAMKLLSKFEMIKRSDSAFF-- 122
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLP--WN 208
W+ E + + P +V+L +D+ +V EYM G L N + E +
Sbjct: 123 -WE-ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYT 180
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
+ +A+DA +HS +I+RD K N+LLD + KL+DFG G H
Sbjct: 181 AEVVLALDA------IHS--MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC 232
Query: 269 TTRIMGTYGYAAPEYVAT----GHLYVKSDVYGFGVVLLEMLTG 308
T + GT Y +PE + + G+ + D + GV L EML G
Sbjct: 233 DTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 82/218 (37%), Gaps = 14/218 (6%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+LG GGFG VF + +G + E K L K H
Sbjct: 192 VLGRGGFGEVFACQMK------ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK-VHS 244
Query: 166 NLVKLIGYCWEDR-QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
+ + Y +E + LV M G + H++ P R I A
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTAQIVSGLE 303
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYV 284
H ++++IYRD K N+LLD N ++SD GLA + T GT G+ APE +
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV--ELKAGQTKTKGYAGTPGFMAPELL 361
Query: 285 ATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
D + GV L EM+ A R GE V
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIA---ARGPFRARGEKV 396
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 68
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 69 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 122
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 123 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L K HPN+V L L+ + + G L + + KG + +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNIL---LDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+DA K +LH + +++RD K N+L LD +SDFGL+K+ + V +
Sbjct: 126 LDAVK---YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST 177
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY APE +A D + GV+ +L G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 127/291 (43%), Gaps = 40/291 (13%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
LG+G FG V++G + + + + S++ E+ E + F+ +
Sbjct: 25 LGQGSFGMVYEG--NARDII-KGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFR-KGSAE------PLPWNTRLKIAIDAAK 219
+V+L+G + + L+V E M G L+++L + AE P +++A + A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPID-----GNSHVTTRIM 273
+ +L++ K ++R+ A N ++ + K+ DFG+ + + D G + R M
Sbjct: 142 GMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
APE + G SD++ FGVVL E+ + L + L++
Sbjct: 200 ------APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLETLQN 384
++ LK +MD +Q P ++ C + P RP+ E++ L++
Sbjct: 239 EQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 62
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 63 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 116
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 117 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
+ E++ L H ++ +L + +V EY G L +++ + +
Sbjct: 56 KTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR 115
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ A + ++HS + +RD K N+L D + KL DFGL + + H+ T
Sbjct: 116 QIVSA---VAYVHS--QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-C 169
Query: 273 MGTYGYAAPEYV-ATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
G+ YAAPE + +L ++DV+ G++L ++ G D + ++ + +
Sbjct: 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIM 223
Query: 332 TDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
K + K + P LL Q+ L+ +PK R SM+ +L
Sbjct: 224 RGKYDVPKWLSP--------SSILLLQQM----LQVDPKKRISMKNLL 259
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 68
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 69 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW----- 122
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 123 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++KL + + R + LV E + G L + + + + +K
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNSHVTTR 271
+ T+LH + ++++RD K N+LL+ K+ DFGL+ + G
Sbjct: 131 LSGT---TYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKE 182
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSL 331
+GT Y APE V K DV+ GV+L +L G P G
Sbjct: 183 RLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGY------PPFGGQ---------- 225
Query: 332 TDKRRLKKIMDPRLEEQYP--IKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
TD+ LK++ + P + + A Q++ L EP R S EE L
Sbjct: 226 TDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEAL 275
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 114/309 (36%), Gaps = 47/309 (15%)
Query: 86 LKMFTLQDLRAATKNFRPDTMLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPD 144
L L LR F ++G G +G+V+KG V LA
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE------ 64
Query: 145 SIQGLREWQAEVKFLGKFSH-PNLVKLIGYCWE------DRQFLLVYEYMQKGSLENHLF 197
E + E+ L K+SH N+ G + D Q LV E+ GS+ + L
Sbjct: 65 -----EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD-LI 118
Query: 198 RKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLA 257
+ L I + + L+ LH + VI+RD K N+LL + KL DFG++
Sbjct: 119 KNTKGNTLKEEWIAYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Query: 258 KLGPIDGNSHVTTRIMGTYGYAAPEYVAT-----GHLYVKSDVYGFGVVLLEMLTGLRAL 312
+D +GT + APE +A KSD++ G+ +EM G L
Sbjct: 177 --AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
Query: 313 DTNRPSGEHVLVDF-ARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKN 371
P L+ P L K+ KK I CL
Sbjct: 235 CDMHPMRALFLIPRNPAPRLKSKKWSKKFQ-----------------SFIESCLVKNHSQ 277
Query: 372 RPSMEEVLE 380
RP+ E++++
Sbjct: 278 RPATEQLMK 286
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P L KL ++ +V EY G + +HL R G +EP + R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D K++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P L KL ++ +V EY G + +HL R G +EP + R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D K++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L K HPN+V L L+ + + G L + + KG + +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNIL---LDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+DA K +LH + +++RD K N+L LD +SDFGL+K+ + V +
Sbjct: 126 LDAVK---YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST 177
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY APE +A D + GV+ +L G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y AP + + D + GV++ EM G ++P
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 25/187 (13%)
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
EP+ + + A+ + FL S + I+RD A NILL + K+ DFGLA+ I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSS--RKCIHRDLAARNILLSENNVVKICDFGLAR--DI 249
Query: 263 DGNSHVT----TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPS 318
N TR+ + APE + KSDV+ +GV+L E+ + L +
Sbjct: 250 YKNPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS----LGGSPYP 303
Query: 319 GEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
G + DF RL++ M R E + QI++ C +PK RP E+
Sbjct: 304 GVQMDEDFC-------SRLREGMRMRAPEYSTPE----IYQIMLDCWHRDPKERPRFAEL 352
Query: 379 LETLQNI 385
+E L ++
Sbjct: 353 VEKLGDL 359
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L K HPN+V L L+ + + G L + + KG + +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNIL---LDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+DA K +LH + +++RD K N+L LD +SDFGL+K+ + V +
Sbjct: 126 LDAVK---YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST 177
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY APE +A D + GV+ +L G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV + + H N+V++ + +V E+++ G+L + + E +
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVC 253
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L+ LH+ + VI+RD K+ +ILL KLSDFG + ++G
Sbjct: 254 LAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVG 309
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T + APE ++ + D++ G++++EM+ G F P L
Sbjct: 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAM 356
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+ ++ + PRL+ + + +L + + L +P R + E+L+
Sbjct: 357 KMIRDNLPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 400
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L K HPN+V L L+ + + G L + + KG + +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNIL---LDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
+DA K +LH + +++RD K N+L LD +SDFGL+K+ + V +
Sbjct: 126 LDAVK---YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST 177
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY APE +A D + GV+ +L G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 86/213 (40%), Gaps = 36/213 (16%)
Query: 183 VYEYMQ-----KGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFK 237
VY Y+Q K +L++ + R+ S E L I I A+ + FLHS K +++RD K
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS--KGLMHRDLK 191
Query: 238 ASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYG----------YAAPEYVATG 287
SNI K+ DFGL D M Y Y +PE +
Sbjct: 192 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN 251
Query: 288 HLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ K D++ G++L E+L E V + +TD R LK + +
Sbjct: 252 NYSHKVDIFSLGLILFELLYSFST------QMERVRI------ITDVRNLKFPL--LFTQ 297
Query: 348 QYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+YP + ++ L P RP +++E
Sbjct: 298 KYPQEHMMVQDM-----LSPSPTERPEATDIIE 325
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 147 QGLREWQ---AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE 203
Q +WQ EV+FL K HPN ++ G + LV EY GS + L + +
Sbjct: 93 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLL--EVHKK 149
Query: 204 PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPI 262
PL + A + L +LHS ++I+RD KA NILL KL DFG A + P
Sbjct: 150 PLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP- 206
Query: 263 DGNSHVTTRIMGTYGYAAPEYVAT---GHLYVKSDVYGFGVVLLEM 305
+GT + APE + G K DV+ G+ +E+
Sbjct: 207 ------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 147 QGLREWQ---AEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE 203
Q +WQ EV+FL K HPN ++ G + LV EY GS + L + +
Sbjct: 54 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLL--EVHKK 110
Query: 204 PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPI 262
PL + A + L +LHS ++I+RD KA NILL KL DFG A + P
Sbjct: 111 PLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP- 167
Query: 263 DGNSHVTTRIMGTYGYAAPEYVAT---GHLYVKSDVYGFGVVLLEM 305
+GT + APE + G K DV+ G+ +E+
Sbjct: 168 ------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYV 284
H + V+YRD K +NILLD + ++SD GLA D + +GT+GY APE +
Sbjct: 306 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVL 361
Query: 285 ATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
G Y S D + G +L ++L G ++ +H + R +LT L P
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTLTMAVELPDSFSP 418
Query: 344 RL 345
L
Sbjct: 419 EL 420
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYV 284
H + V+YRD K +NILLD + ++SD GLA D + +GT+GY APE +
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVL 362
Query: 285 ATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
G Y S D + G +L ++L G ++ +H + R +LT L P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTLTMAVELPDSFSP 419
Query: 344 RL 345
L
Sbjct: 420 EL 421
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P L KL ++ +V EY G + +HL R G EP + R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-Y 147
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+++D K++DFG AK + G T +
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--RVKGR---TWXLC 200
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT Y APE + + D + GV++ EM G ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYV 284
H + V+YRD K +NILLD + ++SD GLA D + +GT+GY APE +
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVL 362
Query: 285 ATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
G Y S D + G +L ++L G ++ +H + R +LT L P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTLTMAVELPDSFSP 419
Query: 344 RL 345
L
Sbjct: 420 EL 421
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYV 284
H + V+YRD K +NILLD + ++SD GLA D + +GT+GY APE +
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVL 362
Query: 285 ATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDP 343
G Y S D + G +L ++L G ++ +H + R +LT L P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTLTMAVELPDSFSP 419
Query: 344 RL 345
L
Sbjct: 420 EL 421
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 27/228 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV + + H N+V++ + +V E+++ G+L + + E +
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVC 176
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR--I 272
+ + L+ LH+ + VI+RD K+ +ILL KLSDFG + V R +
Sbjct: 177 LAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCA----QVSKEVPRRKXL 230
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
+GT + APE ++ + D++ G++++EM+ G F P L
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLK 277
Query: 333 DKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+ ++ + PRL+ + + +L + + L +P R + E+L+
Sbjct: 278 AMKMIRDNLPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 323
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 166 NLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR--LKIAIDAAKDLTF 223
N+++LI + +D +F LV+E +Q GS+ H+ ++ +N R ++ D A L F
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-----FNEREASRVVRDVAAALDF 126
Query: 224 LHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLA-------KLGPIDGNSHVTTRIM 273
LH+ K + +RD K NIL + K+ DF L PI + T
Sbjct: 127 LHT--KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPI--TTPELTTPC 182
Query: 274 GTYGYAAPEYVAT----GHLYVK-SDVYGFGVVLLEMLTG 308
G+ Y APE V Y K D++ GVVL ML+G
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 32/251 (12%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFR-KGSAEPL 205
E Q E F+HPN+++L+ YC +R + L+ + ++G+L N + R K L
Sbjct: 72 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL 131
Query: 206 PWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI--D 263
+ L + + + L +H+ K +RD K +NILL L D G I +
Sbjct: 132 TEDQILWLLLGICRGLEAIHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189
Query: 264 GNSHVTT-----RIMGTYGYAAPE-YVATGHLYV--KSDVYGFGVVLLEMLTGLRALDTN 315
G+ T T Y APE + H + ++DV+ G VL M+ G D
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
Query: 316 RPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSM 375
G+ V +L + +L PR Q++ + +P RP +
Sbjct: 250 FQKGDSV-------ALAVQNQLSIPQSPRHSSAL--------WQLLNSMMTVDPHQRPHI 294
Query: 376 EEVLETLQNIS 386
+L L+ +
Sbjct: 295 PLLLSQLEALQ 305
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +L G FG V+KG W+ K P +N +E E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 75
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 76 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW----- 129
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 130 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 65
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 66 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 119
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ A+ + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 120 -CVQIAEGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +L G FG V+KG W+ K P +N +E E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 75
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 76 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 129
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 130 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 70
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 71 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW----- 124
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFG AKL + +
Sbjct: 125 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV + + H N+V++ + ++ E++Q G+L + + + E ++
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNE-----EQIATV 146
Query: 215 IDAA-KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+A + L +LH+ + VI+RD K+ +ILL KLSDFG I + ++
Sbjct: 147 CEAVLQALAYLHA--QGVIHRDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLV 202
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTD 333
GT + APE ++ + D++ G++++EM+ G ++ P +
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------------VQA 249
Query: 334 KRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+RL+ P+L+ + + L + + L +P+ R + +E+L+
Sbjct: 250 MKRLRDSPPPKLKNSHKVSPVL--RDFLERMLVRDPQERATAQELLD 294
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGS-AEPLPWNTRLKI 213
E + L + P LVKL ++ +V EY+ G + +HL R G +EP + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-Y 146
Query: 214 AIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM 273
A +LHS + +IYRD K N+L+D +++DFG AK + G T +
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGR---TWXLC 199
Query: 274 GTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRP 317
GT APE + + D + GV++ EM G ++P
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +L G FG V+KG W+ K P +N +E E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 68
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 69 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 122
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFGLAKL + +
Sbjct: 123 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 34/238 (14%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E + EV L + HPN++ L +L+ E + G L + L K S
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 113
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPIDGNS 266
LK +D +LHS K + + D K NI LLD + KL DFG+A I+ +
Sbjct: 114 LKQILDGVH---YLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGN 166
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDF 326
I GT + APE V L +++D++ GV+ +L+G
Sbjct: 167 EFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 207
Query: 327 ARPSL--TDKRRLKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
A P L T + L I ++ +E+Y + LA I + L +PK R ++ + LE
Sbjct: 208 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 70
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 71 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW----- 124
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFG AKL + +
Sbjct: 125 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 72
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 73 YVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW----- 126
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFG AKL + +
Sbjct: 127 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 75
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 76 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 129
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFG AKL + +
Sbjct: 130 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 70
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 71 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 124
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFG AKL + +
Sbjct: 125 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF---RKGSAEPLPWNT 209
+ E++ L K +HP ++K+ + ++ + +V E M+ G L + + R A +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNS 266
++ +A+ +LH E +I+RD K N+LL K++DFG +K I G +
Sbjct: 128 QMLLAVQ------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 176
Query: 267 HVTTRIMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR 316
+ + GT Y APE V T D + GV+L L+G +R
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 100 NFRPDTMLGEGGFGRVFKG-WVDH--KTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEV 156
F+ +LG G FG V+KG W+ K P +N +E E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-------KEILDEA 68
Query: 157 KFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRK----GSAEPLPWNTRLK 212
+ +P++ +L+G C L+ + M G L +++ GS L W
Sbjct: 69 YVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW----- 122
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+ AK + +L ++ +++RD A N+L+ + K++DFG AKL + +
Sbjct: 123 -CVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLT 307
+ A E + +SDV+ +GV + E++T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 23/226 (10%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV + + H N+V++ + +V E+++ G+L + + E +
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVC 133
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L+ LH+ + VI+RD K+ +ILL KLSDFG + ++G
Sbjct: 134 LAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVG 189
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T + APE ++ + D++ G++++EM+ G P F P L
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPY------FNEPPLKAM 236
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+ ++ + PRL+ + + +L + + L +P R + E+L+
Sbjct: 237 KMIRDNLPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF---RKGSAEPLPWNT 209
+ E++ L K +HP ++K+ + ++ + +V E M+ G L + + R A +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNS 266
++ +A+ +LH E +I+RD K N+LL K++DFG +K I G +
Sbjct: 122 QMLLAVQ------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 170
Query: 267 HVTTRIMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR 316
+ + GT Y APE V T D + GV+L L+G +R
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 23/226 (10%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV + + H N+V++ + +V E+++ G+L + + E +
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVC 131
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L+ LH+ + VI+RD K+ +ILL KLSDFG + ++G
Sbjct: 132 LAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVG 187
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T + APE ++ + D++ G++++EM+ G P F P L
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPY------FNEPPLKAM 234
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+ ++ + PRL+ + + +L + + L +P R + E+L+
Sbjct: 235 KMIRDNLPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 278
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF---RKGSAEPLPWNT 209
+ E++ L K +HP ++K+ + ++ + +V E M+ G L + + R A +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNS 266
++ +A+ +LH E +I+RD K N+LL K++DFG +K I G +
Sbjct: 121 QMLLAVQ------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 169
Query: 267 HVTTRIMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR 316
+ + GT Y APE V T D + GV+L L+G +R
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 23/226 (10%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV + + H N+V++ + +V E+++ G+L + + E +
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVC 122
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L+ LH+ + VI+RD K+ +ILL KLSDFG + ++G
Sbjct: 123 LAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVG 178
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T + APE ++ + D++ G++++EM+ G P F P L
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPY------FNEPPLKAM 225
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+ ++ + PRL+ + + +L + + L +P R + E+L+
Sbjct: 226 KMIRDNLPPRLKNLHKVSPSL--KGFLDRLLVRDPAQRATAAELLK 269
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 23/226 (10%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV + + H N+V++ + +V E+++ G+L + + E +
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVC 126
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + L+ LH+ + VI+RD K+ +ILL KLSDFG + ++G
Sbjct: 127 LAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVG 182
Query: 275 TYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK 334
T + APE ++ + D++ G++++EM+ G P F P L
Sbjct: 183 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPY------FNEPPLKAM 229
Query: 335 RRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+ ++ + PRL+ + + +L + + L +P R + E+L+
Sbjct: 230 KMIRDNLPPRLKNLHKVSPSL--KGFLDRLLVRDPAQRATAAELLK 273
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF---RKGSAEPLPWNT 209
+ E++ L K +HP ++K+ + ++ + +V E M+ G L + + R A +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNS 266
++ +A+ +LH E +I+RD K N+LL K++DFG +K I G +
Sbjct: 122 QMLLAVQ------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 170
Query: 267 HVTTRIMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR 316
+ + GT Y APE V T D + GV+L L+G +R
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF---RKGSAEPLPWNT 209
+ E++ L K +HP ++K+ + ++ + +V E M+ G L + + R A +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNS 266
++ +A+ +LH E +I+RD K N+LL K++DFG +K I G +
Sbjct: 122 QMLLAVQ------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 170
Query: 267 HVTTRIMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR 316
+ + GT Y APE V T D + GV+L L+G +R
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
HPN+VKL + LV E + G L + +K + ++ + A
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS---- 120
Query: 224 LHSSEKSVIYRDFKASNILL---DGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
H + V++RD K N+L + + K+ DFG A+L P D T T YAA
Sbjct: 121 -HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAA 177
Query: 281 PEYVATGHLYVKSDVYGFGVVLLEMLTG 308
PE + D++ GV+L ML+G
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSG 205
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 34/238 (14%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E + EV L + HPN++ L +L+ E + G L + L K S
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 134
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPIDGNS 266
LK +D +LHS K + + D K NI LLD + KL DFG+A I+ +
Sbjct: 135 LKQILDGVH---YLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGN 187
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDF 326
I GT + APE V L +++D++ GV+ +L+G
Sbjct: 188 EFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 228
Query: 327 ARPSL--TDKRRLKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
A P L T + L I ++ +E+Y + LA I + L +PK R + + LE
Sbjct: 229 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 286
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG +G VFK + +T P S LRE + L + H N
Sbjct: 10 IGEGTYGTVFKA-KNRETHEIVALKRVRLDDDDEGVPSS--ALRE----ICLLKELKHKN 62
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+V+L D++ LV+E+ + + G +P + L K L F HS
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL---FQLLKGLGFCHS 119
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
++V++RD K N+L++ + KL+DFGLA+ I + + T Y P+ +
Sbjct: 120 --RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFG 175
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRAL 312
LY S D++ G + E+ R L
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 34/238 (14%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E + EV L + HPN++ L +L+ E + G L + L K S
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 120
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPIDGNS 266
LK +D +LHS K + + D K NI LLD + KL DFG+A I+ +
Sbjct: 121 LKQILDGVH---YLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGN 173
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDF 326
I GT + APE V L +++D++ GV+ +L+G
Sbjct: 174 EFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 214
Query: 327 ARPSL--TDKRRLKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
A P L T + L I ++ +E+Y + LA I + L +PK R + + LE
Sbjct: 215 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 272
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF---RKGSAEPLPWNT 209
+ E++ L K +HP ++K+ + ++ + +V E M+ G L + + R A +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNS 266
++ +A+ +LH E +I+RD K N+LL K++DFG +K I G +
Sbjct: 247 QMLLAVQ------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 295
Query: 267 HVTTRIMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR 316
+ + GT Y APE V T D + GV+L L+G +R
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 31/248 (12%)
Query: 87 KMFTLQDLRAATKNFRPDTM---------LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXX 137
K+F DL ++ P + LG G G V K + KT
Sbjct: 128 KVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIRIISKRK 186
Query: 138 XXXSNPDSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF 197
+ + E++ L K +HP ++K+ + ++ + +V E M+ G L + +
Sbjct: 187 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV 245
Query: 198 ---RKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKL 251
R A + ++ +A+ +LH E +I+RD K N+LL K+
Sbjct: 246 GNKRLKEATCKLYFYQMLLAVQ------YLH--ENGIIHRDLKPENVLLSSQEEDCLIKI 297
Query: 252 SDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY---VATGHLYVKSDVYGFGVVLLEMLTG 308
+DFG +K I G + + + GT Y APE V T D + GV+L L+G
Sbjct: 298 TDFGHSK---ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
Query: 309 LRALDTNR 316
+R
Sbjct: 355 YPPFSEHR 362
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 165 PNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFL 224
P +V+ G + + E M G+ L +K P+P K+ + K L +L
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKL-KKRMQGPIPERILGKMTVAIVKALYYL 140
Query: 225 HSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYV 284
+ VI+RD K SNILLD KL DFG++ G + + R G Y APE +
Sbjct: 141 -KEKHGVIHRDVKPSNILLDERGQIKLCDFGIS--GRL-VDDKAKDRSAGCAAYMAPERI 196
Query: 285 ----ATGHLY-VKSDVYGFGVVLLEMLTG 308
T Y +++DV+ G+ L+E+ TG
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 101 FRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLG 160
++ +LG+G FG V K D LRE V+ L
Sbjct: 28 YKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLRE----VQLLK 81
Query: 161 KFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLF-RKGSAEPLPWNTRLKIAIDAAK 219
+ HPN+ KL + + F LV E G L + + RK +E +I
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAARIIRQVLS 137
Query: 220 DLTFLHSSEKSVIYRDFKASNILLDG---SYNAKLSDFGLAKLGPIDGNSHVTTRIMGTY 276
+T+ H ++ +++RD K N+LL+ N ++ DFGL+ + + +I GT
Sbjct: 138 GITYXHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKXKDKI-GTA 192
Query: 277 GYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
Y APE V G K DV+ GV+L +L+G
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 33/233 (14%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHL----FRKGSAEPLPWNTR 210
E+ + + HP L+ L + + +L+ E++ G L + + ++ AE + +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY--- 154
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDG--SYNAKLSDFGLA-KLGPIDGNSH 267
++ A + K H E S+++ D K NI+ + + + K+ DFGLA KL P D
Sbjct: 155 MRQACEGLK-----HMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP-DEIVK 208
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
VTT T +AAPE V + +D++ GV+ +L+GL +GE L
Sbjct: 209 VTT---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF-----AGEDDL---- 256
Query: 328 RPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
+L + +R D +E + A I L+ EP+ R ++ + LE
Sbjct: 257 -ETLQNVKRC----DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--PLPWNTR 210
+ E++ + HP LV L +D + +++YE+M G LF K + E + +
Sbjct: 96 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEA 151
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDG--SYNAKLSDFGL-AKLGPIDGNSH 267
++ K L +H E + ++ D K NI+ S KL DFGL A L P +
Sbjct: 152 VEYMRQVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVK 208
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
VTT GT +AAPE + +D++ GV+ +L+GL
Sbjct: 209 VTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 247
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
+ E+ L + SHPN++KL + LV E + G L + + KG +
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE-------R 148
Query: 213 IAIDAAKDL----TFLHSSEKSVIYRDFKASNILLDG---SYNAKLSDFGLAKLGPIDGN 265
A DA K + +LH E +++RD K N+L K++DFGL+K I +
Sbjct: 149 DAADAVKQILEAVAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEH 203
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNR 316
+ + GT GY APE + + D++ G++ +L G R
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 30/230 (13%)
Query: 179 QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSS------EKSVI 232
Q L+ +Y + GSL ++L + L + LK+A + L LH+ + ++
Sbjct: 109 QLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 233 YRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS---HVTTRIMGTYGYAAPEYVATG-- 287
+RD K+ NIL+ + ++D GLA D N TR+ GT Y PE +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPEVLDESLN 223
Query: 288 ----HLYVKSDVYGFGVVLLEM----LTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKK 339
Y+ +D+Y FG++L E+ ++G + P + V D PS D R +
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD---PSYEDMREIVC 280
Query: 340 I--MDPRLEEQYPIKGAL-LAGQIIIKCLEAEPKNRPSMEEVLETLQNIS 386
I + P ++ L G+++ +C P +R + V +TL +S
Sbjct: 281 IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 36/238 (15%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQ-FLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
E + EV L + HPN++ L +E+R +L+ E + G L + L +K S +
Sbjct: 61 EIEREVSILRQVLHPNIITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPIDGN 265
+K +D + +LH+ K + + D K NI LLD + + KL DFGLA I+
Sbjct: 120 FIKQILDG---VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDG 172
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVD 325
I GT + APE V L +++D++ GV+ +L+G
Sbjct: 173 VEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------- 214
Query: 326 FARPSLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
A P L D ++ L I + +E++ + + LA I K L E + R +++E L
Sbjct: 215 -ASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAE--PLPWNTRLK 212
E++ + HP LV L +D + +++YE+M G LF K + E + + ++
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVE 259
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDG--SYNAKLSDFGL-AKLGPIDGNSHVT 269
K L +H E + ++ D K NI+ S KL DFGL A L P + VT
Sbjct: 260 YMRQVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVT 316
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
T GT +AAPE + +D++ GV+ +L+GL
Sbjct: 317 T---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 353
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 18/143 (12%)
Query: 179 QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKA 238
+F LV+E M+ GS+ +H+ ++ L + ++ D A L FLH+ K + +RD K
Sbjct: 85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHN--KGIAHRDLKP 139
Query: 239 SNILLDGSYN---AKLSDFGLAKLGPIDGN-SHVTTRIM----GTYGYAAPEYVAT---- 286
NIL + K+ DFGL ++G+ S ++T + G+ Y APE V
Sbjct: 140 ENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE 199
Query: 287 GHLYVK-SDVYGFGVVLLEMLTG 308
+Y K D++ GV+L +L+G
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSG 222
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK-- 212
E+ H N+V+ +G E+ + E + GSL L K PL N +
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG--PLKDNEQTIGF 126
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA--KLSDFGLAKLGPIDGNSHVTT 270
+ L +LH ++ +++RD K N+L++ +Y+ K+SDFG +K + G + T
Sbjct: 127 YTKQILEGLKYLHDNQ--IVHRDIKGDNVLIN-TYSGVLKISDFGTSKR--LAGINPCTE 181
Query: 271 RIMGTYGYAAPEYVATG-HLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
GT Y APE + G Y K+ D++ G ++EM TG +P +
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG-------KPP----FYELGE 230
Query: 329 PSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
P + + K+ ++ + P + A I+KC E +P R ++L
Sbjct: 231 P----QAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 36/237 (15%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
+ EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSH 267
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 122 QILNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
I GT + APE V L +++D++ GV+ +L+G A
Sbjct: 175 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------A 214
Query: 328 RPSLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
P L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 180 FLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKAS 239
F LV +MQ L+ + K S E + + + K L ++HS+ V++RD K
Sbjct: 104 FYLVMPFMQ-TDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHSA--GVVHRDLKPG 155
Query: 240 NILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGF 298
N+ ++ K+ DFGLA+ + +V TR Y APE + + Y ++ D++
Sbjct: 156 NLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSV 210
Query: 299 GVVLLEMLTG 308
G ++ EMLTG
Sbjct: 211 GCIMAEMLTG 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 70/180 (38%), Gaps = 8/180 (4%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
Q E + G+ P++V + + D Q + + L L R+G P
Sbjct: 82 QREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQG-----PLAPPRA 136
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
+AI + +RD K NIL+ A L DFG+A D
Sbjct: 137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNT 195
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPS--GEHVLVDFARPS 330
+GT Y APE + H ++D+Y VL E LTG ++ S G H+ RPS
Sbjct: 196 VGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPS 255
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 155 EVKFLGKFSHPNLVKL--IGYCWEDRQFLLVYEYMQKG---SLENHLFRKGSAEP--LPW 207
E+ L + HPN++ L + DR+ L+++Y + ++ H K + +P LP
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 208 NTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS----YNAKLSDFGLAKL--GP 261
+ + +LH++ V++RD K +NIL+ G K++D G A+L P
Sbjct: 128 GMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
+ + + ++ T+ Y APE + Y K+ D++ G + E+LT
Sbjct: 186 LKPLADLDP-VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSHVT 269
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 124 LNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF-- 174
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V L +++D++ GV+ +L+G A P
Sbjct: 175 KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASP 216
Query: 330 SLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 217 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L H N+V L ++ LV+EY+ K L+ +L G+ + N +L
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMH-NVKL-FL 106
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ L + H + V++RD K N+L++ KL+DFGLA+ I ++ +
Sbjct: 107 FQLLRGLAYCH--RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-- 162
Query: 275 TYGYAAPEYVATGHLY-VKSDVYGFGVVLLEMLTG 308
T Y P+ + Y + D++G G + EM TG
Sbjct: 163 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG 197
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWE--DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
E+ L K HPN+VKL+ + + +V+E + +G + + +PL +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----MEVPTLKPLSEDQARF 141
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
D K + +LH + +I+RD K SN+L+ + K++DFG++ G+ + +
Sbjct: 142 YFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKGSDALLSNT 197
Query: 273 MGTYGYAAPEYVATGHLYVKS---DVYGFGVVLLEMLTG 308
+GT + APE ++ DV+ GV L + G
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 182 LVYEYMQKGSL---ENHLF--RKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDF 236
++YEYM+ S+ + + F K +P I +++H+ EK++ +RD
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDV 178
Query: 237 KASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIM---GTYGYAAPEYVATGHLY--V 291
K SNIL+D + KLSDFG + V +I GTY + PE+ + Y
Sbjct: 179 KPSNILMDKNGRVKLSDFG-------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGA 231
Query: 292 KSDVYGFGVVLLEMLTGL 309
K D++ G+ L M +
Sbjct: 232 KVDIWSLGICLYVMFYNV 249
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK-- 212
E+ H N+V+ +G E+ + E + GSL L K PL N +
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG--PLKDNEQTIGF 112
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA--KLSDFGLAKLGPIDGNSHVTT 270
+ L +LH ++ +++RD K N+L++ +Y+ K+SDFG +K + G + T
Sbjct: 113 YTKQILEGLKYLHDNQ--IVHRDIKGDNVLIN-TYSGVLKISDFGTSKR--LAGINPCTE 167
Query: 271 RIMGTYGYAAPEYVATG-HLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFAR 328
GT Y APE + G Y K+ D++ G ++EM TG +P +
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG-------KPP----FYELGE 216
Query: 329 PSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
P + + K+ ++ + P + A I+KC E +P R ++L
Sbjct: 217 P----QAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 144 DSIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDR---QFLLVYEYMQKGSLENHLFRKG 200
D + + E+K L F H N++ + +F VY + + H
Sbjct: 92 DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH- 150
Query: 201 SAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-- 258
S++PL + L ++HS++ VI+RD K SN+L++ + K+ DFG+A+
Sbjct: 151 SSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGL 208
Query: 259 -LGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
P + + + T + T Y APE + + H Y ++ D++ G + EML
Sbjct: 209 CTSPAE-HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDR---QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRL 211
E+K L F H N++ + +F VY + + H S++PL
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH-SSQPLTLEHVR 162
Query: 212 KIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK---LGPIDGNSHV 268
+ L ++HS++ VI+RD K SN+L++ + K+ DFG+A+ P + + +
Sbjct: 163 YFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE-HQYF 219
Query: 269 TTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLT 307
T + T Y APE + + H Y ++ D++ G + EML
Sbjct: 220 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 145 SIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAE 203
S + ++ + E + K HPN+V+L E+ LV++ + G L E+ + R+ +E
Sbjct: 68 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 127
Query: 204 PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLG 260
+ +I + + + HS+ +++R+ K N+LL KL+DFGLA
Sbjct: 128 ADASHCIQQI----LESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLA--- 178
Query: 261 PIDGN-SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
I+ N S GT GY +PE + D++ GV+L +L G
Sbjct: 179 -IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 36/237 (15%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
+ EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSH 267
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 122 QILNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
I GT + APE V L +++D++ GV+ +L+G A
Sbjct: 175 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------A 214
Query: 328 RPSLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
P L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L K H N+V L + LV + + G L + + +G + ++
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNIL-LDGSYNAKL--SDFGLAKLGPIDGNSHVTTR 271
+ A K +LH E +++RD K N+L L N+K+ +DFGL+K+ + N ++T
Sbjct: 116 LSAVK---YLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTA 167
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY APE +A D + GV+ +L G
Sbjct: 168 -CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSHVT 269
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 123 LNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF-- 173
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V L +++D++ GV+ +L+G A P
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASP 215
Query: 330 SLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 216 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 102/248 (41%), Gaps = 43/248 (17%)
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDR--QFLLVYEYMQKGSLENHLFRKGSAEPLPW 207
R++ E L FSHPN++ ++G C L+ +M GSL N + +G+ +
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYN-VLHEGTNFVVDQ 110
Query: 208 NTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH 267
+ +K A+D A+ + FLH+ E + + ++++D A++S +
Sbjct: 111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARIS------------MAD 158
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVK--------SDVYGFGVVLLEMLTGLRALD--TNRP 317
V AP +VA L K +D++ F V+L E++T +N
Sbjct: 159 VKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME 218
Query: 318 SGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEE 377
G V ++ RP++ P + +++ C+ +P RP +
Sbjct: 219 IGMKVALEGLRPTI------------------PPGISPHVSKLMKICMNEDPAKRPKFDM 260
Query: 378 VLETLQNI 385
++ L+ +
Sbjct: 261 IVPILEKM 268
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E + HPN+V+L E+ L+++ + G L + + + ++
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI 130
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNSHVTTR 271
++A LH + V++RD K N+LL KL+DFGLA ++G
Sbjct: 131 LEAV-----LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFG 183
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY +PE + D++ GV+L +L G
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSHVT 269
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 124 LNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF-- 174
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V L +++D++ GV+ +L+G A P
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASP 216
Query: 330 SLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 217 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSHVT 269
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 123 LNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF-- 173
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V L +++D++ GV+ +L+G A P
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASP 215
Query: 330 SLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 216 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQ-FLLVYEYMQKGSLENHL-----FRKGSAEPLPWN 208
E++ + HP LV L Y ++D + +V + + G L HL F++ + +
Sbjct: 65 ELQIMQGLEHPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI-- 121
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHV 268
L +A+D ++ + +I+RD K NILLD + ++DF +A + P + +
Sbjct: 122 CELVMALDYLQN--------QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQI 171
Query: 269 TTRIMGTYGYAAPEYVAT----GHLYVKSDVYGFGVVLLEMLTGLR 310
TT + GT Y APE ++ G+ + D + GV E+L G R
Sbjct: 172 TT-MAGTKPYMAPEMFSSRKGAGYSFA-VDWWSLGVTAYELLRGRR 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSHVT 269
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 124 LNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF-- 174
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V L +++D++ GV+ +L+G A P
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASP 216
Query: 330 SLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 217 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSHVT 269
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 124 LNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF-- 174
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V L +++D++ GV+ +L+G A P
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASP 216
Query: 330 SLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 217 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 106/255 (41%), Gaps = 32/255 (12%)
Query: 106 MLGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSH 164
++G G FG VF+ V+ +A +Q R E++ + H
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKV---------------LQDKRFKNRELQIMRIVKH 91
Query: 165 PNLVKLIGYCW-----EDRQFL-LVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAA 218
PN+V L + + +D FL LV EY+ + + +P
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFGLAKLGPIDGNSHVTTRIMGTYG 277
+ L ++HS + +RD K N+LLD KL DFG AK+ I G +V+ I Y
Sbjct: 152 RSLAYIHSI--GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSX-ICSRY- 206
Query: 278 YAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRR 336
Y APE + Y + D++ G V+ E++ G SG LV+ + T R
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE--SGIDQLVEIIKVLGTPSRE 264
Query: 337 LKKIMDPR-LEEQYP 350
K M+P +E ++P
Sbjct: 265 QIKTMNPNYMEHKFP 279
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 205 LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG 264
+P + KIA+ K L LHS + SVI+RD K SN+L++ K+ DFG++
Sbjct: 150 IPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL---V 205
Query: 265 NSHVTTRIMGTYGYAAPEYV-----ATGHLYVKSDVYGFGVVLLEM 305
+S T G Y APE + G+ VKSD++ G+ ++E+
Sbjct: 206 DSVAKTIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIEL 250
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 36/237 (15%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
+ EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSH 267
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 122 QILNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
I GT + APE V L +++D++ GV+ +L+G A
Sbjct: 175 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------A 214
Query: 328 RPSLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
P L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 36/237 (15%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
+ EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSH 267
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 122 QILNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
I GT + APE V L +++D++ GV+ +L+G A
Sbjct: 175 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------A 214
Query: 328 RPSLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
P L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 180 FLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKAS 239
F LV +MQ L+ + + S E + + + K L ++HS+ V++RD K
Sbjct: 122 FYLVMPFMQT-DLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSA--GVVHRDLKPG 173
Query: 240 NILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGF 298
N+ ++ K+ DFGLA+ + +V TR Y APE + + Y ++ D++
Sbjct: 174 NLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSV 228
Query: 299 GVVLLEMLTG 308
G ++ EMLTG
Sbjct: 229 GCIMAEMLTG 238
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 36/237 (15%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
+ EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSH 267
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 122 QILNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
I GT + APE V L +++D++ GV+ +L+G A
Sbjct: 175 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------A 214
Query: 328 RPSLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
P L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSHVT 269
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 124 LNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF-- 174
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V L +++D++ GV+ +L+G A P
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASP 216
Query: 330 SLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 217 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 29/246 (11%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+GEG +G VFK + +T P S LRE + L + H N
Sbjct: 10 IGEGTYGTVFKA-KNRETHEIVALKRVRLDDDDEGVPSS--ALRE----ICLLKELKHKN 62
Query: 167 LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHS 226
+V+L D++ LV+E+ + + G +P + L K L F HS
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL---FQLLKGLGFCHS 119
Query: 227 SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT 286
++V++RD K N+L++ + KL++FGLA+ I + + T Y P+ +
Sbjct: 120 --RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFG 175
Query: 287 GHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDK-RRLKKIMDPR 344
LY S D++ G + E+ R L F + D+ +R+ +++
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPL-------------FPGNDVDDQLKRIFRLLGTP 222
Query: 345 LEEQYP 350
EEQ+P
Sbjct: 223 TEEQWP 228
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 36/237 (15%)
Query: 153 QAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
+ EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSH 267
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 122 QILNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 268 VTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFA 327
I GT + APE V L +++D++ GV+ +L+G A
Sbjct: 175 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------A 214
Query: 328 RPSLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
P L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 41/249 (16%)
Query: 147 QGLREWQAEVKFLGKFSHPN--LVKLIGYCWEDRQFLLVYEYMQKGS--LENHLFRKGSA 202
Q L ++ E+ +L K + +++L Y D+ +Y M+ G+ L + L +K S
Sbjct: 96 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSI 152
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGP 261
+P + K ++A + + +++ D K +N L+ DG KL DFG+A
Sbjct: 153 DPWERKSYWKNMLEAVHTI-----HQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQ 205
Query: 262 IDGNSHVTTRIMGTYGYAAPEYV-----------ATGHLYVKSDVYGFGVVLLEMLTGLR 310
D S V +GT Y PE + + + KSDV+ G +L M G
Sbjct: 206 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-- 263
Query: 311 ALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPK 370
+ + ++ + +L I+DP E ++P ++ CL+ +PK
Sbjct: 264 -----KTPFQQIINQIS--------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 310
Query: 371 NRPSMEEVL 379
R S+ E+L
Sbjct: 311 QRISIPELL 319
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 36/230 (15%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
R F+ + M G+G FG V G K+ + N RE Q
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLG--KEKSTGMSVAIKKVIQDPRFRN-------RELQI 69
Query: 155 EVKFLGKFSHPNLVKLIGYCW----EDRQFL---LVYEYMQKG---SLENHLFRKGSAEP 204
++ L HPN+V+L Y + DR+ + +V EY+ N+ R+ + P
Sbjct: 70 -MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPP 128
Query: 205 LPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILL---DGSYNAKLSDFGLA-KLG 260
+ L + + LH +V +RD K N+L+ DG+ KL DFG A KL
Sbjct: 129 ILIKVFL---FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTL--KLCDFGSAKKLS 183
Query: 261 PIDGN-SHVTTRIMGTYGYAAPEYV-ATGHLYVKSDVYGFGVVLLEMLTG 308
P + N +++ +R Y APE + H D++ G + EM+ G
Sbjct: 184 PSEPNVAYICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 150 REWQAEVKFLGKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWN 208
R+ E++ L ++ HPN++ L + + +V E M+ G L + + R+ +
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS 119
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNIL-LDGSYN---AKLSDFGLAKLGPIDG 264
L K + +LH+ + V++RD K SNIL +D S N ++ DFG AK +
Sbjct: 120 AVL---FTITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRA 172
Query: 265 NSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ + T + APE + D++ GV+L MLTG
Sbjct: 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ S P +V L G E + E ++ GSL + + G LP + L
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---LPEDRALYYL 170
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILL--DGSYNAKLSDFGLAKLGPIDG--NSHVT- 269
A + L +LH+ + +++ D KA N+LL DGS A L DFG A DG S +T
Sbjct: 171 GQALEGLEYLHT--RRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTG 227
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
I GT + APE V K D++ ++L ML G
Sbjct: 228 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ S P +V L G E + E ++ GSL + + G LP + L
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---LPEDRALYYL 156
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILL--DGSYNAKLSDFGLAKLGPIDG--NSHVT- 269
A + L +LH+ + +++ D KA N+LL DGS A L DFG A DG S +T
Sbjct: 157 GQALEGLEYLHT--RRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTG 213
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
I GT + APE V K D++ ++L ML G
Sbjct: 214 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ S P +V L G E + E ++ GSL + + G LP + L
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---LPEDRALYYL 172
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILL--DGSYNAKLSDFGLAKLGPIDG--NSHVT- 269
A + L +LH+ + +++ D KA N+LL DGS A L DFG A DG S +T
Sbjct: 173 GQALEGLEYLHT--RRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTG 229
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
I GT + APE V K D++ ++L ML G
Sbjct: 230 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L + H N+VKL ++ +LV+E++ + + +G E + T
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFL 106
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + + H ++ V++RD K N+L++ K++DFGLA+ I + T +
Sbjct: 107 LQLLNGIAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIV 162
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
T Y AP+ + Y + D++ G + EM+ G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 41/249 (16%)
Query: 147 QGLREWQAEVKFLGKFSHPN--LVKLIGYCWEDRQFLLVYEYMQKGS--LENHLFRKGSA 202
Q L ++ E+ +L K + +++L Y D+ +Y M+ G+ L + L +K S
Sbjct: 96 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSI 152
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGP 261
+P + K ++A + + +++ D K +N L+ DG KL DFG+A
Sbjct: 153 DPWERKSYWKNMLEAVHTI-----HQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQ 205
Query: 262 IDGNSHVTTRIMGTYGYAAPEYV-----------ATGHLYVKSDVYGFGVVLLEMLTGLR 310
D S V +GT Y PE + + + KSDV+ G +L M G
Sbjct: 206 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-- 263
Query: 311 ALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPK 370
+ + ++ + +L I+DP E ++P ++ CL+ +PK
Sbjct: 264 -----KTPFQQIINQIS--------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 310
Query: 371 NRPSMEEVL 379
R S+ E+L
Sbjct: 311 QRISIPELL 319
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
EV L + HPN++ L +L+ E + G L + L K S LK
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPID-GNSHVT 269
++ + +LHS + + + D K NI LLD + K+ DFGLA ID GN
Sbjct: 124 LNG---VYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF-- 174
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARP 329
I GT + APE V L +++D++ GV+ +L+G A P
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASP 216
Query: 330 SLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVLE 380
L D ++ L + ++ E++Y + LA I + L +PK R ++++ L+
Sbjct: 217 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L + H N+VKL ++ +LV+E++ + + +G E + T
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFL 106
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + + H ++ V++RD K N+L++ K++DFGLA+ I + T +
Sbjct: 107 LQLLNGIAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVV 162
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
T Y AP+ + Y + D++ G + EM+ G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 145 SIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAE 203
S + ++ + E + K HPN+V+L E+ LV++ + G L E+ + R+ +E
Sbjct: 44 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 103
Query: 204 PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLG 260
+ +I + + + HS+ +++R+ K N+LL KL+DFGLA
Sbjct: 104 ADASHCIQQI----LESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLA--- 154
Query: 261 PIDGN-SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
I+ N S GT GY +PE + D++ GV+L +L G
Sbjct: 155 -IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E+ L + H N+VKL ++ +LV+E++ + + +G E + T
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFL 106
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMG 274
+ + + H ++ V++RD K N+L++ K++DFGLA+ I + T +
Sbjct: 107 LQLLNGIAYCH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVV 162
Query: 275 TYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
T Y AP+ + Y + D++ G + EM+ G
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
+ +P + KIA+ K L LHS + SVI+RD K SN+L++ K+ DFG++
Sbjct: 104 QTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162
Query: 263 DGNSHVTTRIMGTYGYAAPEYV-----ATGHLYVKSDVYGFGVVLLEM 305
D + G Y APE + G+ VKSD++ G+ ++E+
Sbjct: 163 DVAKDIDA---GCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIEL 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 145 SIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAE 203
S + ++ + E + K HPN+V+L E+ LV++ + G L E+ + R+ +E
Sbjct: 45 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 104
Query: 204 PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLG 260
+ +I + + + HS+ +++R+ K N+LL KL+DFGLA
Sbjct: 105 ADASHCIQQI----LESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLA--- 155
Query: 261 PIDGN-SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
I+ N S GT GY +PE + D++ GV+L +L G
Sbjct: 156 -IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 60/300 (20%)
Query: 100 NFRPDTMLGEGGFGR-VFKGWVDHKTLAPTXXXXXXXXXXXXSNPD-SIQGLREWQAEVK 157
+F P +LG G G V++G D++ +A S D +Q LRE
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVA-----VKRILPECFSFADREVQLLRESD---- 75
Query: 158 FLGKFSHPNLVKLIGYCWE-DRQFLLVYEYMQKGSLENHLFRKGSA----EPLPWNTRLK 212
HPN+++ +C E DRQF + + +L+ ++ +K A EP+ T L+
Sbjct: 76 -----EHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPI---TLLQ 125
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLD-----GSYNAKLSDFGLAKLGPIDGNSH 267
L LHS ++++RD K NIL+ G A +SDFGL K + G
Sbjct: 126 ---QTTSGLAHLHSL--NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV-GRHS 179
Query: 268 VTTR--IMGTYGYAAPEYVATG---HLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
+ R + GT G+ APE ++ + D++ G V +++ + + P G+ +
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS-----EGSHPFGKSL 234
Query: 323 LVDFARPSLTDKRRLKKIMDP-RLEEQYPIKGA-LLAGQIIIKCLEAEPKNRPSMEEVLE 380
+R+ ++ L+ +P K ++A ++I K + +P+ RPS + VL+
Sbjct: 235 -----------QRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 118/289 (40%), Gaps = 49/289 (16%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G GG +VF+ + K + Q L ++ E+ +L K +
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN--------QTLDSYRNEIAYLNKLQQHS 68
Query: 167 --LVKLIGYCWEDRQFLLVYEYMQKGS--LENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+++L Y D+ +Y M+ G+ L + L +K S +P + K ++A +
Sbjct: 69 DKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI- 124
Query: 223 FLHSSEKSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
+ +++ D K +N L+ DG KL DFG+A D S V +GT Y P
Sbjct: 125 ----HQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 282 EYV-----------ATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPS 330
E + + + KSDV+ G +L M G + + ++ +
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-------KTPFQQIINQIS--- 228
Query: 331 LTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
+L I+DP E ++P ++ CL+ +PK R S+ E+L
Sbjct: 229 -----KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 145 SIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAE 203
S + ++ + E + K HPN+V+L E+ LV++ + G L E+ + R+ +E
Sbjct: 45 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 104
Query: 204 PLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLG 260
+ +I + + + HS+ +++R+ K N+LL KL+DFGLA
Sbjct: 105 ADASHCIQQI----LESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLA--- 155
Query: 261 PIDGN-SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
I+ N S GT GY +PE + D++ GV+L +L G
Sbjct: 156 -IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 41/249 (16%)
Query: 147 QGLREWQAEVKFLGKFSHPN--LVKLIGYCWEDRQFLLVYEYMQKGS--LENHLFRKGSA 202
Q L ++ E+ +L K + +++L Y D+ +Y M+ G+ L + L +K S
Sbjct: 68 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSI 124
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGP 261
+P + K ++A + + +++ D K +N L+ DG KL DFG+A
Sbjct: 125 DPWERKSYWKNMLEAVHTI-----HQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQ 177
Query: 262 IDGNSHVTTRIMGTYGYAAPEYV-----------ATGHLYVKSDVYGFGVVLLEMLTGLR 310
D S V +GT Y PE + + + KSDV+ G +L M G
Sbjct: 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 311 ALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPK 370
+ + +L I+DP E ++P ++ CL+ +PK
Sbjct: 238 PF---------------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 282
Query: 371 NRPSMEEVL 379
R S+ E+L
Sbjct: 283 QRISIPELL 291
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 18/143 (12%)
Query: 179 QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKA 238
+F LV+E M+ GS+ +H+ ++ L + ++ D A L FLH+ K + +RD K
Sbjct: 85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHN--KGIAHRDLKP 139
Query: 239 SNILLDGSYN---AKLSDFGLAKLGPIDGN-SHVTTRIM----GTYGYAAPEYVAT---- 286
NIL + K+ DF L ++G+ S ++T + G+ Y APE V
Sbjct: 140 ENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE 199
Query: 287 GHLYVK-SDVYGFGVVLLEMLTG 308
+Y K D++ GV+L +L+G
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSG 222
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E + HPN+V+L E+ L+++ + G L + + + ++
Sbjct: 60 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI 119
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNSHVTTR 271
++A LH + V++R+ K N+LL KL+DFGLA ++G
Sbjct: 120 LEAV-----LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFG 172
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY +PE + D++ GV+L +L G
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 41/249 (16%)
Query: 147 QGLREWQAEVKFLGKFSHPN--LVKLIGYCWEDRQFLLVYEYMQKGS--LENHLFRKGSA 202
Q L ++ E+ +L K + +++L Y D+ +Y M+ G+ L + L +K S
Sbjct: 52 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSI 108
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGP 261
+P + K ++A + + +++ D K +N L+ DG KL DFG+A
Sbjct: 109 DPWERKSYWKNMLEAVHTI-----HQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQ 161
Query: 262 IDGNSHVTTRIMGTYGYAAPEYV-----------ATGHLYVKSDVYGFGVVLLEMLTGLR 310
D S V +GT Y PE + + + KSDV+ G +L M G
Sbjct: 162 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-- 219
Query: 311 ALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPK 370
+ + ++ + +L I+DP E ++P ++ CL+ +PK
Sbjct: 220 -----KTPFQQIINQIS--------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 266
Query: 371 NRPSMEEVL 379
R S+ E+L
Sbjct: 267 QRISIPELL 275
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA-----EPLPWNT 209
E HP++V+L+ D +V+E+M L + ++ A E + +
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA---KLSDFGLA-KLGPIDGN 265
+I + L + H + ++I+RD K N+LL N+ KL DFG+A +LG +
Sbjct: 136 MRQIL----EALRYCH--DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE---S 186
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
V +GT + APE V DV+G GV+L +L+G
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 33/228 (14%)
Query: 90 TLQDLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGL 149
T ++RA ++ +P +G G +G V VD +T A +
Sbjct: 19 TAWEVRAVYRDLQP---VGSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQS-----ELFAK 69
Query: 150 REWQAEVKFLGKFSHPNLVKLIGYCWEDR------QFLLVYEYM--QKGSLENHLFRKGS 201
R ++ E++ L H N++ L+ D F LV +M G L H
Sbjct: 70 RAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH------ 122
Query: 202 AEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGP 261
E L + + K L ++H++ +I+RD K N+ ++ K+ DFGLA+
Sbjct: 123 -EKLGEDRIQFLVYQMLKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
Query: 262 IDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
+ V TR Y APE + Y ++ D++ G ++ EM+TG
Sbjct: 180 SEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 41/249 (16%)
Query: 147 QGLREWQAEVKFLGKFSHPN--LVKLIGYCWEDRQFLLVYEYMQKGS--LENHLFRKGSA 202
Q L ++ E+ +L K + +++L Y D+ +Y M+ G+ L + L +K S
Sbjct: 48 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSI 104
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGP 261
+P + K ++A + + +++ D K +N L+ DG KL DFG+A
Sbjct: 105 DPWERKSYWKNMLEAVHTI-----HQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQ 157
Query: 262 IDGNSHVTTRIMGTYGYAAPEYV-----------ATGHLYVKSDVYGFGVVLLEMLTGLR 310
D S V +GT Y PE + + + KSDV+ G +L M G
Sbjct: 158 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 217
Query: 311 ALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPK 370
+ + +L I+DP E ++P ++ CL+ +PK
Sbjct: 218 PF---------------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 262
Query: 371 NRPSMEEVL 379
R S+ E+L
Sbjct: 263 QRISIPELL 271
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G FG VFK KT P I LRE +K L H N
Sbjct: 26 IGQGTFGEVFKA-RHRKTGQKVALKKVLMENEKEGFP--ITALRE----IKILQLLKHEN 78
Query: 167 LVKLIGYCWEDRQ--------FLLVYEYMQ---KGSLENHLFRKGSAEPLPWNTRLKIAI 215
+V LI C LV+++ + G L N L + +E +++ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE---IKRVMQMLL 135
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH---VTTRI 272
+ L ++H ++ +++RD KA+N+L+ KL+DFGLA+ + NS R+
Sbjct: 136 NG---LYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 273 MGTYGYAAPEYVATGHLY-VKSDVYGFGVVLLEMLT 307
+ T Y PE + Y D++G G ++ EM T
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 150 REWQAEVKFLGKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWN 208
R+ E++ L ++ HPN++ L + + LV E M+ G L + + R+ +
Sbjct: 65 RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS 124
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNIL-LDGSYNA---KLSDFGLAKLGPIDG 264
L K + +LHS + V++RD K SNIL +D S N ++ DFG AK +
Sbjct: 125 FVLH---TIGKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRA 177
Query: 265 NSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ + T + APE + D++ G++L ML G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ GV++ EM+ G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ GV++ EM+ G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 41/249 (16%)
Query: 147 QGLREWQAEVKFLGKFSHPN--LVKLIGYCWEDRQFLLVYEYMQKGS--LENHLFRKGSA 202
Q L ++ E+ +L K + +++L Y D+ +Y M+ G+ L + L +K S
Sbjct: 96 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSI 152
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGP 261
+P + K ++A + + +++ D K +N L+ DG KL DFG+A
Sbjct: 153 DPWERKSYWKNMLEAVHTI-----HQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQ 205
Query: 262 IDGNSHVTTRIMGTYGYAAPEYV-----------ATGHLYVKSDVYGFGVVLLEMLTGLR 310
D S V +G Y PE + + + KSDV+ G +L M G
Sbjct: 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-- 263
Query: 311 ALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPK 370
+ + ++ + +L I+DP E ++P ++ CL+ +PK
Sbjct: 264 -----KTPFQQIINQIS--------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 310
Query: 371 NRPSMEEVL 379
R S+ E+L
Sbjct: 311 QRISIPELL 319
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G FG VFK KT P I LRE +K L H N
Sbjct: 26 IGQGTFGEVFKA-RHRKTGQKVALKKVLMENEKEGFP--ITALRE----IKILQLLKHEN 78
Query: 167 LVKLIGYCWEDRQ--------FLLVYEYMQ---KGSLENHLFRKGSAEPLPWNTRLKIAI 215
+V LI C LV+++ + G L N L + +E +++ +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI---KRVMQMLL 135
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH---VTTRI 272
+ L ++H ++ +++RD KA+N+L+ KL+DFGLA+ + NS R+
Sbjct: 136 NG---LYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 273 MGTYGYAAPEYVATGHLY-VKSDVYGFGVVLLEMLT 307
+ T Y PE + Y D++G G ++ EM T
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G FG VFK KT P I LRE +K L H N
Sbjct: 26 IGQGTFGEVFKA-RHRKTGQKVALKKVLMENEKEGFP--ITALRE----IKILQLLKHEN 78
Query: 167 LVKLIGYCWEDRQ--------FLLVYEYMQ---KGSLENHLFRKGSAEPLPWNTRLKIAI 215
+V LI C LV+++ + G L N L + +E +++ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI---KRVMQMLL 135
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH---VTTRI 272
+ L ++H ++ +++RD KA+N+L+ KL+DFGLA+ + NS R+
Sbjct: 136 NG---LYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 273 MGTYGYAAPEYVATGHLY-VKSDVYGFGVVLLEMLT 307
+ T Y PE + Y D++G G ++ EM T
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 150 REWQAEVKFLGKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWN 208
R+ E++ L ++ HPN++ L + + LV E M+ G L + + R+ +
Sbjct: 65 RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS 124
Query: 209 TRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNIL-LDGSYNA---KLSDFGLAKLGPIDG 264
L K + +LHS + V++RD K SNIL +D S N ++ DFG AK +
Sbjct: 125 FVLHT---IGKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRA 177
Query: 265 NSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPS 318
+ + T + APE + D++ G++L ML G N PS
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPS 230
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQ-FLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
E + EV L + H N++ L +E+R +L+ E + G L + L +K S +
Sbjct: 61 EIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPIDGN 265
+K +D + +LH+ K + + D K NI LLD + + KL DFGLA DG
Sbjct: 120 FIKQILDG---VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVD 325
I GT + APE V L +++D++ GV+ +L+G
Sbjct: 174 EF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------- 214
Query: 326 FARPSLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
A P L D ++ L I + +E++ + + LA I K L E + R +++E L
Sbjct: 215 -ASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQ-FLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
E + EV L + H N++ L +E+R +L+ E + G L + L +K S +
Sbjct: 61 EIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPIDGN 265
+K +D + +LH+ K + + D K NI LLD + + KL DFGLA DG
Sbjct: 120 FIKQILDG---VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVD 325
I GT + APE V L +++D++ GV+ +L+G
Sbjct: 174 EF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------- 214
Query: 326 FARPSLTDKRR--LKKI--MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
A P L D ++ L I + +E++ + + LA I K L E + R +++E L
Sbjct: 215 -ASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G FG VFK KT P I LRE +K L H N
Sbjct: 25 IGQGTFGEVFKA-RHRKTGQKVALKKVLMENEKEGFP--ITALRE----IKILQLLKHEN 77
Query: 167 LVKLIGYCWEDRQ--------FLLVYEYMQ---KGSLENHLFRKGSAEPLPWNTRLKIAI 215
+V LI C LV+++ + G L N L + +E +++ +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI---KRVMQMLL 134
Query: 216 DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSH---VTTRI 272
+ L ++H ++ +++RD KA+N+L+ KL+DFGLA+ + NS R+
Sbjct: 135 NG---LYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 273 MGTYGYAAPEYVATGHLY-VKSDVYGFGVVLLEMLT 307
+ T Y PE + Y D++G G ++ EM T
Sbjct: 190 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 167 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 219
Query: 281 PEYVATG-HLYVKSDVYGFGVVLLEMLTG 308
PE + H + D++ G ++ E+LTG
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 145 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRA 197
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 236
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 145 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRA 197
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 236
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 145 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRA 197
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E + H N+V+L E+ LV++ + G L + + + ++
Sbjct: 53 EARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI 112
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNSHVTTR 271
++A LH + V++RD K N+LL KL+DFGLA + G+
Sbjct: 113 LEAV-----LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWFG 165
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY +PE + D++ GV+L +L G
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 143 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 197
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ EM+ G
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 143 LKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKG--SLENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 88 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 147
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 148 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 202
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 203 SAKQL-VRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 260 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 290
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 148 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 200
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 239
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 36/238 (15%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQ-FLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
E + EV L + H N++ L +E+R +L+ E + G L + L +K S +
Sbjct: 61 EIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPIDGN 265
+K +D + +LH+ K + + D K NI LLD + + KL DFGLA DG
Sbjct: 120 FIKQILDG---VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVD 325
I GT + APE V L +++D++ GV+ +L+G
Sbjct: 174 EF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------- 214
Query: 326 FARPSLTDKRR--LKKIMDPR--LEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
A P L D ++ L I +E++ + LA I K L E + R +++E L
Sbjct: 215 -ASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ EM+ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ EM+ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 144 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 196
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 235
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 140 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 231
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 50/308 (16%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G+G FG V++G W + S+ + RE AE+ H
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIF-----------SSREERSWFRE--AEIYQTVMLRHE 63
Query: 166 NLVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKD 220
N++ I +D Q LV +Y + GSL ++L R + E + +K+A+ A
Sbjct: 64 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASG 118
Query: 221 LTFLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL--GPIDGNSHVTTRI 272
L LH + ++ +RD K+ NIL+ + ++D GLA D
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 178
Query: 273 MGTYGYAAPEY----VATGHL--YVKSDVYGFGVVLLEM-----LTGLRALDTNRPSGEH 321
+GT Y APE + H + ++D+Y G+V E+ + G+ D P +
Sbjct: 179 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE-DYQLPYYDL 237
Query: 322 VLVDFARPSLTDKRRL--KKIMDPRLEEQYPIKGAL-LAGQIIIKCLEAEPKNRPSMEEV 378
V D PS+ + R++ ++ + P + ++ AL + +I+ +C A R + +
Sbjct: 238 VPSD---PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 294
Query: 379 LETLQNIS 386
+TL +S
Sbjct: 295 KKTLSQLS 302
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 143 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 234
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 137 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 189
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 149 LKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 201
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 150 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 202
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 241
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 140 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 145 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 197
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 236
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 150 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 202
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 241
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 143 LKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 234
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 50/308 (16%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G+G FG V++G W + S+ + RE AE+ H
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIF-----------SSREERSWFRE--AEIYQTVMLRHE 58
Query: 166 NLVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKD 220
N++ I +D Q LV +Y + GSL ++L R + E + +K+A+ A
Sbjct: 59 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASG 113
Query: 221 LTFLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL--GPIDGNSHVTTRI 272
L LH + ++ +RD K+ NIL+ + ++D GLA D
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 173
Query: 273 MGTYGYAAPEY----VATGHL--YVKSDVYGFGVVLLEM-----LTGLRALDTNRPSGEH 321
+GT Y APE + H + ++D+Y G+V E+ + G+ D P +
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE-DYQLPYYDL 232
Query: 322 VLVDFARPSLTDKRRL--KKIMDPRLEEQYPIKGAL-LAGQIIIKCLEAEPKNRPSMEEV 378
V D PS+ + R++ ++ + P + ++ AL + +I+ +C A R + +
Sbjct: 233 VPSD---PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 289
Query: 379 LETLQNIS 386
+TL +S
Sbjct: 290 KKTLSQLS 297
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 150 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 202
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 241
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 140 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 231
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 36/238 (15%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQ-FLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
E + EV L + H N++ L +E+R +L+ E + G L + L +K S +
Sbjct: 61 EIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPIDGN 265
+K +D + +LH+ K + + D K NI LLD + + KL DFGLA DG
Sbjct: 120 FIKQILDG---VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVD 325
I GT + APE V L +++D++ GV+ +L+G
Sbjct: 174 EF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------- 214
Query: 326 FARPSLTDKRR--LKKIMDPR--LEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
A P L D ++ L I +E++ + LA I K L E + R +++E L
Sbjct: 215 -ASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 144 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 196
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 235
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ EM+ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 149 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 201
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 144 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 196
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
PE + Y ++ D++ G ++ E+LTG
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 157 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 209
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 248
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 158 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 210
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 249
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 161 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 213
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 252
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 158 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 210
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 249
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 157 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 209
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 248
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 50/308 (16%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G+G FG V++G W + S+ + RE AE+ H
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIF-----------SSREERSWFRE--AEIYQTVMLRHE 60
Query: 166 NLVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKD 220
N++ I +D Q LV +Y + GSL ++L R + E + +K+A+ A
Sbjct: 61 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASG 115
Query: 221 LTFLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL--GPIDGNSHVTTRI 272
L LH + ++ +RD K+ NIL+ + ++D GLA D
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 175
Query: 273 MGTYGYAAPEY----VATGHL--YVKSDVYGFGVVLLEM-----LTGLRALDTNRPSGEH 321
+GT Y APE + H + ++D+Y G+V E+ + G+ D P +
Sbjct: 176 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE-DYQLPYYDL 234
Query: 322 VLVDFARPSLTDKRRL--KKIMDPRLEEQYPIKGAL-LAGQIIIKCLEAEPKNRPSMEEV 378
V D PS+ + R++ ++ + P + ++ AL + +I+ +C A R + +
Sbjct: 235 VPSD---PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 291
Query: 379 LETLQNIS 386
+TL +S
Sbjct: 292 KKTLSQLS 299
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 143 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 36/238 (15%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQ-FLLVYEYMQKGSLENHLFRKGSAEPLPWNT 209
E + EV L + H N++ L +E+R +L+ E + G L + L +K S +
Sbjct: 61 EIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNI-LLDGSY---NAKLSDFGLAKLGPIDGN 265
+K +D + +LH+ K + + D K NI LLD + + KL DFGLA DG
Sbjct: 120 FIKQILDG---VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGV 173
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVD 325
I GT + APE V L +++D++ GV+ +L+G
Sbjct: 174 EF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------------- 214
Query: 326 FARPSLTDKRR--LKKIMDPR--LEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEVL 379
A P L D ++ L I +E++ + LA I K L E + R +++E L
Sbjct: 215 -ASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 144 LKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRA 196
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 135 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 187
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 134 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 186
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 134 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 186
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ EM+ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 140 LKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 231
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 150 REW--QAEVKFLGKFSHPNLVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFR-KGSA 202
R W +AE+ H N++ I +D Q LV +Y + GSL ++L R +
Sbjct: 79 RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV 138
Query: 203 EPLPWNTRLKIAIDAAKDLTFLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGL 256
E + +K+A+ A L LH + ++ +RD K+ NIL+ + ++D GL
Sbjct: 139 EGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193
Query: 257 AKL--GPIDGNSHVTTRIMGTYGYAAPEY----VATGHL--YVKSDVYGFGVVLLEM--- 305
A D +GT Y APE + H + ++D+Y G+V E+
Sbjct: 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
Query: 306 --LTGLRALDTNRPSGEHVLVDFARPSLTDKRRL--KKIMDPRLEEQYPIKGAL-LAGQI 360
+ G+ D P + V D PS+ + R++ ++ + P + ++ AL + +I
Sbjct: 254 CSIGGIHE-DYQLPYYDLVPSD---PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI 309
Query: 361 IIKCLEAEPKNRPSMEEVLETLQNIS 386
+ +C A R + + +TL +S
Sbjct: 310 MRECWYANGAARLTALRIKKTLSQLS 335
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 135 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 187
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 226
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 50/308 (16%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G+G FG V++G W + S+ + RE AE+ H
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIF-----------SSREERSWFRE--AEIYQTVMLRHE 83
Query: 166 NLVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKD 220
N++ I +D Q LV +Y + GSL ++L R + E + +K+A+ A
Sbjct: 84 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASG 138
Query: 221 LTFLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL--GPIDGNSHVTTRI 272
L LH + ++ +RD K+ NIL+ + ++D GLA D
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 198
Query: 273 MGTYGYAAPEY----VATGHL--YVKSDVYGFGVVLLEM-----LTGLRALDTNRPSGEH 321
+GT Y APE + H + ++D+Y G+V E+ + G+ D P +
Sbjct: 199 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE-DYQLPYYDL 257
Query: 322 VLVDFARPSLTDKRRL--KKIMDPRLEEQYPIKGAL-LAGQIIIKCLEAEPKNRPSMEEV 378
V D PS+ + R++ ++ + P + ++ AL + +I+ +C A R + +
Sbjct: 258 VPSD---PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 314
Query: 379 LETLQNIS 386
+TL +S
Sbjct: 315 KKTLSQLS 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ EM+ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 134 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 186
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKG--SLENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 90 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 149
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 150 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 204
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 205 SAKQL-VRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 261
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 262 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 292
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKG--SLENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 88 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 147
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 148 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 202
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 203 SAKQL-VRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 260 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 290
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ EM+ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 136 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 188
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 227
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 41/249 (16%)
Query: 147 QGLREWQAEVKFLGKFSHPN--LVKLIGYCWEDRQFLLVYEYMQKGS--LENHLFRKGSA 202
Q L ++ E+ +L K + +++L Y D+ +Y M+ G+ L + L +K S
Sbjct: 68 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSI 124
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILL-DGSYNAKLSDFGLAKLGP 261
+P + K ++A + + +++ D K +N L+ DG KL DFG+A
Sbjct: 125 DPWERKSYWKNMLEAVHTI-----HQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQ 177
Query: 262 IDGNSHVTTRIMGTYGYAAPEYV-----------ATGHLYVKSDVYGFGVVLLEMLTGLR 310
D V +GT Y PE + + + KSDV+ G +L M G
Sbjct: 178 PDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 311 ALDTNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPK 370
+ + +L I+DP E ++P ++ CL+ +PK
Sbjct: 238 PF---------------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 282
Query: 371 NRPSMEEVL 379
R S+ E+L
Sbjct: 283 QRISIPELL 291
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 50/308 (16%)
Query: 107 LGEGGFGRVFKG-WVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+G+G FG V++G W + S+ + RE AE+ H
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIF-----------SSREERSWFRE--AEIYQTVMLRHE 57
Query: 166 NLVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFR-KGSAEPLPWNTRLKIAIDAAKD 220
N++ I +D Q LV +Y + GSL ++L R + E + +K+A+ A
Sbjct: 58 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASG 112
Query: 221 LTFLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL--GPIDGNSHVTTRI 272
L LH + ++ +RD K+ NIL+ + ++D GLA D
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 172
Query: 273 MGTYGYAAPEY----VATGHL--YVKSDVYGFGVVLLEM-----LTGLRALDTNRPSGEH 321
+GT Y APE + H + ++D+Y G+V E+ + G+ D P +
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE-DYQLPYYDL 231
Query: 322 VLVDFARPSLTDKRRL--KKIMDPRLEEQYPIKGAL-LAGQIIIKCLEAEPKNRPSMEEV 378
V D PS+ + R++ ++ + P + ++ AL + +I+ +C A R + +
Sbjct: 232 VPSD---PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 288
Query: 379 LETLQNIS 386
+TL +S
Sbjct: 289 KKTLSQLS 296
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + + T Y APE
Sbjct: 144 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYYRAPEV 198
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ EM+ G
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPEVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ EM+ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKG--SLENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 92 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 151
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 152 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 206
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 207 SAKQL-VRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 263
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 264 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 294
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + +V TR Y A
Sbjct: 161 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRA 213
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 252
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKG--SLENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 133 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 192
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 193 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 247
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 248 SAKQL-VRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 304
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 305 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 335
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
+ +P + KIA+ K L LHS + SVI+RD K SN+L++ K DFG++
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD 189
Query: 263 DGNSHVTTRIMGTYGYAAPEYV-----ATGHLYVKSDVYGFGVVLLEM 305
D + G Y APE + G+ VKSD++ G+ +E+
Sbjct: 190 DVAKDIDA---GCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIEL 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 66 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 125
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 126 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 180
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 181 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 238 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 268
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 73 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 132
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 133 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 187
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 188 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 244
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 245 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 275
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKG--SLENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 62 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 121
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 122 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 176
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 177 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 233
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 234 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 264
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 33/115 (28%)
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL-------------------GPID 263
F+H E +I+RD K +N LL+ + K+ DFGLA+ GP +
Sbjct: 144 FIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 264 GN------SHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRA 311
N SHV TR Y APE + Y KS D++ G + E+L L++
Sbjct: 202 KNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
HPN+V+ +V EY G L + G + I +++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG---VSY 130
Query: 224 LHSSEKSVIYRDFKASNILLDGS--YNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
H+ + V +RD K N LLDGS K+ DFG +K + T +GT Y AP
Sbjct: 131 CHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAP 185
Query: 282 EYVATGHLYVK-SDVYGFGVVLLEMLTG 308
E + K +DV+ GV L ML G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKG--SLENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 82 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 141
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 142 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 196
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 197 SAKQL-VRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 253
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 254 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 284
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 66 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 125
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 126 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 180
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 181 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 238 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 268
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 128/321 (39%), Gaps = 54/321 (16%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
R ++ +G+G +G V++G + +A S+ D RE
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGENVA----------VKIFSSRDEKSWFRE--T 51
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E+ H N++ I R Q L+ Y + GSL ++L L +
Sbjct: 52 ELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSC 107
Query: 211 LKIAIDAAKDLTFLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG 264
L+I + A L LH + ++ +RD K+ NIL+ + ++D GLA +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----- 162
Query: 265 NSHVTTRI-------MGTYGYAAPEY------VATGHLYVKSDVYGFGVVLLE----MLT 307
+S T ++ +GT Y APE V Y + D++ FG+VL E M++
Sbjct: 163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS 222
Query: 308 GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKI--MDPRLEEQYPIKGALLA-GQIIIKC 364
D P + V D PS D R++ + P + ++ L + +++ +C
Sbjct: 223 NGIVEDYKPPFYDVVPND---PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 279
Query: 365 LEAEPKNRPSMEEVLETLQNI 385
P R + + +TL I
Sbjct: 280 WYQNPSARLTALRIKKTLTKI 300
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 42/252 (16%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYE--YMQKGSLENHLFRKGSAEPLPWNTRLK 212
E++ L F HPN++ L R + +E M K L L R A+ + + R+
Sbjct: 79 EIRLLNHFHHPNILGL-------RDIFVHFEEPAMHKLYLVTELMRTDLAQVI-HDQRIV 130
Query: 213 IAIDAAKDLTF-----LHS-SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS 266
I+ + + LH E V++RD NILL + + + DF LA+ D N
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 267 --HVTTRIMGTYGYAAPEYVATGHLYVK-SDVYGFGVVLLEML---------TGLRALD- 313
+VT R Y APE V + K D++ G V+ EM T L+
Sbjct: 191 THYVTHR-----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245
Query: 314 ----TNRPSGEHVLVDFARPSLTDKRR--LKKIMDPRLEEQYPIKGALLAGQIIIKCLEA 367
P E V++ F+ PS D R L + P +A +I K LE
Sbjct: 246 IVEVVGTPKIEDVVM-FSSPSARDYLRNSLSNVPARAWTAVVPTADP-VALDLIAKMLEF 303
Query: 368 EPKNRPSMEEVL 379
P+ R S E+ L
Sbjct: 304 NPQRRISTEQAL 315
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 89/226 (39%), Gaps = 39/226 (17%)
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAK---- 219
HPN+V+ ++ EY G L + G + + D A+
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG-----------RFSEDEARFFFQ 123
Query: 220 ----DLTFLHSSEKSVIYRDFKASNILLDGS--YNAKLSDFGLAKLGPIDGNSHVTTRIM 273
+++ HS + + +RD K N LLDGS K+ DFG +K + T +
Sbjct: 124 QLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---V 178
Query: 274 GTYGYAAPEYVATGHLYVK-SDVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLT 332
GT Y APE + K +DV+ GV L ML G + ++
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY----------- 227
Query: 333 DKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
++ +++I+ + I+ + +I + A+P R S+ E+
Sbjct: 228 -RKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEI 272
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 59 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 118
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 119 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 173
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 174 SAK-QLVRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 230
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 231 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 261
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
HPN+V+ +V EY G L + G + I +++
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG---VSY 129
Query: 224 LHSSEKSVIYRDFKASNILLDGS--YNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
H+ + V +RD K N LLDGS K+ DFG +K + T +GT Y AP
Sbjct: 130 CHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAP 184
Query: 282 EYVATGHLYVK-SDVYGFGVVLLEMLTG 308
E + K +DV+ GV L ML G
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 58 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 117
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 118 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 172
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 173 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 229
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 230 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 260
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 127/321 (39%), Gaps = 54/321 (16%)
Query: 95 RAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQA 154
R + +G+G +G V++G + +A S+ D RE
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRGSWQGENVA----------VKIFSSRDEKSWFRE--T 80
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E+ H N++ I R Q L+ Y + GSL ++L L +
Sbjct: 81 ELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSC 136
Query: 211 LKIAIDAAKDLTFLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDG 264
L+I + A L LH + ++ +RD K+ NIL+ + ++D GLA +
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----- 191
Query: 265 NSHVTTRI-------MGTYGYAAPEY------VATGHLYVKSDVYGFGVVLLE----MLT 307
+S T ++ +GT Y APE V Y + D++ FG+VL E M++
Sbjct: 192 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS 251
Query: 308 GLRALDTNRPSGEHVLVDFARPSLTDKRRLKKI--MDPRLEEQYPIKGALLA-GQIIIKC 364
D P + V D PS D R++ + P + ++ L + +++ +C
Sbjct: 252 NGIVEDYKPPFYDVVPND---PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 308
Query: 365 LEAEPKNRPSMEEVLETLQNI 385
P R + + +TL I
Sbjct: 309 WYQNPSARLTALRIKKTLTKI 329
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKG--SLENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 67 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 126
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 127 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 181
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 182 SAK-QLVRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 238
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 239 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 269
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 54 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 114 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 169 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 226 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 42/252 (16%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYE--YMQKGSLENHLFRKGSAEPLPWNTRLK 212
E++ L F HPN++ L R + +E M K L L R A+ + + R+
Sbjct: 79 EIRLLNHFHHPNILGL-------RDIFVHFEEPAMHKLYLVTELMRTDLAQVI-HDQRIV 130
Query: 213 IAIDAAKDLTF-----LHS-SEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNS 266
I+ + + LH E V++RD NILL + + + DF LA+ D N
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 267 --HVTTRIMGTYGYAAPEYVATGHLYVK-SDVYGFGVVLLEML---------TGLRALD- 313
+VT R Y APE V + K D++ G V+ EM T L+
Sbjct: 191 THYVTHR-----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245
Query: 314 ----TNRPSGEHVLVDFARPSLTDKRR--LKKIMDPRLEEQYPIKGALLAGQIIIKCLEA 367
P E V++ F+ PS D R L + P +A +I K LE
Sbjct: 246 IVEVVGTPKIEDVVM-FSSPSARDYLRNSLSNVPARAWTAVVPTADP-VALDLIAKMLEF 303
Query: 368 EPKNRPSMEEVL 379
P+ R S E+ L
Sbjct: 304 NPQRRISTEQAL 315
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 54 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 114 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 169 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 226 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 125/309 (40%), Gaps = 54/309 (17%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G +G V++G + +A S+ D RE E+ H N
Sbjct: 16 VGKGRYGEVWRGSWQGENVA----------VKIFSSRDEKSWFRE--TELYNTVMLRHEN 63
Query: 167 LVKLIGYCWEDR----QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
++ I R Q L+ Y + GSL ++L L + L+I + A L
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLA 119
Query: 223 FLH------SSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI---- 272
LH + ++ +RD K+ NIL+ + ++D GLA + +S T ++
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM-----HSQSTNQLDVGN 174
Query: 273 ---MGTYGYAAPEY------VATGHLYVKSDVYGFGVVLLE----MLTGLRALDTNRPSG 319
+GT Y APE V Y + D++ FG+VL E M++ D P
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234
Query: 320 EHVLVDFARPSLTDKRRLKKI--MDPRLEEQYPIKGALLA-GQIIIKCLEAEPKNRPSME 376
+ V D PS D R++ + P + ++ L + +++ +C P R +
Sbjct: 235 DVVPND---PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTAL 291
Query: 377 EVLETLQNI 385
+ +TL I
Sbjct: 292 RIKKTLTKI 300
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 55 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 114
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 115 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 169
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 170 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 226
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 227 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 257
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 163 SHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
S P ++ L + +L+ EY G + + L AE + N +++ + +
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFS-LCLPELAEMVSENDVIRLIKQILEGVY 145
Query: 223 FLHSSEKSVIYRDFKASNILLDGSY---NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYA 279
+LH + ++++ D K NILL Y + K+ DFG+++ G++ IMGT Y
Sbjct: 146 YLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI---GHACELREIMGTPEYL 200
Query: 280 APEYVATGHLYVKSDVYGFGVVLLEMLT 307
APE + + +D++ G++ +LT
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ D+GLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + V TR Y A
Sbjct: 158 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WYRA 210
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 249
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 157 KFLGKFSHPNLVKLIGYCWE-----DRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRL 211
+FL + HP++V++ + D +V EY+ SL ++ + LP +
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL-----KRSKGQKLPVAEAI 185
Query: 212 KIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTR 271
++ L++LHS ++Y D K NI+L KL D G + I+ +
Sbjct: 186 AYLLEILPALSYLHS--IGLVYNDLKPENIMLT-EEQLKLIDLG--AVSRINSFGY---- 236
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEM 305
+ GT G+ APE V TG V +D+Y G L +
Sbjct: 237 LYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGL + + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 54 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 114 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 169 SAK-QLVRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 226 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAEPLPWNTRLKI 213
E + HPN+V+L E+ LV++ + G L E+ + R+ +E
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA--------- 130
Query: 214 AIDAAKDL-----TFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGN 265
DA+ + + H + +++RD K N+LL KL+DFGLA + G
Sbjct: 131 --DASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGE 186
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY +PE + D++ GV+L +L G
Sbjct: 187 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHP 165
+LGEG +G+V K +D +TL P+ +++ E++ L + H
Sbjct: 12 LLGEGSYGKV-KEVLDSETLC-RRAVKILKKKKLRRIPNGEANVKK---EIQLLRRLRHK 66
Query: 166 NLVKLIGYCW--EDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
N+++L+ + E ++ +V EY G E + + P L +
Sbjct: 67 NVIQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQLIDGLEY 124
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAK-LGPIDGNSHVTTRIMGTYGYAAPE 282
LHS + ++++D K N+LL K+S G+A+ L P + T G+ + PE
Sbjct: 125 LHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAFQPPE 181
Query: 283 YVATG---HLYVKSDVYGFGVVLLEMLTGLRALD 313
+A G K D++ GV L + TGL +
Sbjct: 182 -IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DFGLA+ + V TR Y A
Sbjct: 134 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRA 186
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+QG E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 54 LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 114 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 169 SAK-QLVRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 226 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+Q R E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 54 LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYS 113
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 114 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 169 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 226 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+QG E++ + K H N+V+L + + +D +L LV +Y+ + + H
Sbjct: 54 LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 114 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V + I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 169 SAK-QLVRGEPNV-SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 226 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 146 IQGLREWQAEVKFLGKFSHPNLVKLIGYCW-----EDRQFL-LVYEYMQKGS--LENHLF 197
+QG E++ + K H N+V+L + + +D +L LV +Y+ + H
Sbjct: 54 LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYS 113
Query: 198 RKGSAEPLPWNTRLKIAI-DAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA-KLSDFG 255
R P+ + +K+ + + L ++HS + +RD K N+LLD KL DFG
Sbjct: 114 RAKQTLPVIY---VKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 256 LAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDT 314
AK + G +V+ I Y Y APE + Y S DV+ G VL E+L G
Sbjct: 169 SAK-QLVRGEPNVSX-ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 315 NRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEE 347
+ SG LV+ + T R + M+P E
Sbjct: 226 D--SGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS+ +I+RD K SN+ ++ ++ DFGLA+ + +V TR Y A
Sbjct: 136 LKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRA 188
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
PE + Y ++ D++ G ++ E+L G
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 136 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 190
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 143 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 197
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 141 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 195
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 135 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 189
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 136 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 190
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 143 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 197
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 51/246 (20%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFSHPN 166
+G+G +G V + ++++T A NP ++ ++ EV+ + K HPN
Sbjct: 34 IGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIK---TEVRLMKKLHHPN 89
Query: 167 LVKLIGYCWEDRQFL-LVYEYMQKGSLENHL----------------------------- 196
+ +L +ED Q++ LV E G L + L
Sbjct: 90 IARLYEV-YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 197 ----FRKGSAEPLPWNTRLKIAIDAAKD----LTFLHSSEKSVIYRDFKASNILL--DGS 246
G E L + R K+ + + L +LH+ + + +RD K N L + S
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN--QGICHRDIKPENFLFSTNKS 206
Query: 247 YNAKLSDFGLAK--LGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYV--KSDVYGFGVVL 302
+ KL DFGL+K +G + T GT + APE + T + K D + GV+L
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 303 LEMLTG 308
+L G
Sbjct: 267 HLLLMG 272
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIA 214
E + HPN+V+L E+ LV++ + G L + + + ++
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI 112
Query: 215 IDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGNSHVTTR 271
+++ H +++RD K N+LL KL+DFGLA + G+
Sbjct: 113 LESVN-----HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFG 165
Query: 272 IMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY +PE + D++ GV+L +L G
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 135 LHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 189
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
+ L ++HS+ +I+RD K SN+ ++ ++ DFGLA+ + +V TR Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 279 AAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
APE + Y ++ D++ G ++ E+L G
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 150 REWQAEVKFLGKF-SHPNLVKLIGYCWEDRQFLLVYEYMQKGS--LENHLFRKGSAEPLP 206
R+ E++ L ++ HPN++ L ++D +++ V + KG L+ L +K +E
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKD-VYDDGKYVYVVTELXKGGELLDKILRQKFFSE--- 115
Query: 207 WNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNIL-LDGSYN---AKLSDFGLAKLGPI 262
+ K + +LH+ + V++RD K SNIL +D S N ++ DFG AK +
Sbjct: 116 -REASAVLFTITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QL 170
Query: 263 DGNSHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ + T + APE + D++ GV+L LTG
Sbjct: 171 RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 180 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 234
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 49/236 (20%)
Query: 100 NFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFL 159
N + ++G G +G V+KG +D + +A +N + + + +
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDERPVA--------VKVFSFANRQNFIN----EKNIYRV 61
Query: 160 GKFSHPNLVKLIGYCWEDR-------QFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
H N+ + I ++R ++LLV EY GSL +L S W + +
Sbjct: 62 PLMEHDNIARFI--VGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCR 115
Query: 213 IAIDAAKDLTFLHSS-------EKSVIYRDFKASNILLDGSYNAKLSDFGLAK------- 258
+A + L +LH+ + ++ +RD + N+L+ +SDFGL+
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175
Query: 259 LGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS--------DVYGFGVVLLEML 306
+ P + ++ + + GT Y APE V G + ++ D+Y G++ E+
Sbjct: 176 VRPGEEDNAAISEV-GTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSL-ENHLFRKGSAEPLPWNTRLKI 213
E + HPN+V+L E+ LV++ + G L E+ + R+ +E
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA--------- 103
Query: 214 AIDAAKDLTFL-----HSSEKSVIYRDFKASNILLDGSYN---AKLSDFGLAKLGPIDGN 265
DA+ + + H +++RD K N+LL KL+DFGLA + G+
Sbjct: 104 --DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGD 159
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
GT GY +PE + D++ GV+L +L G
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 98/251 (39%), Gaps = 43/251 (17%)
Query: 145 SIQGLREWQAEVKFLGKFSHPNLVKLIGYCWEDR--QFLLVYEYMQKGSLENHLFRKGSA 202
S + R++ E L FSHPN++ ++G C L+ + GSL N + +G+
Sbjct: 47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYN-VLHEGTN 105
Query: 203 EPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPI 262
+ + +K A+D A+ FLH+ E + + ++ +D A++S
Sbjct: 106 FVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARIS---------- 155
Query: 263 DGNSHVTTRIMGTYGYAAPEYVATGHLYVK--------SDVYGFGVVLLEMLTGLRALD- 313
+ V AP +VA L K +D + F V+L E++T
Sbjct: 156 --XADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFAD 213
Query: 314 -TNRPSGEHVLVDFARPSLTDKRRLKKIMDPRLEEQYPIKGALLAGQIIIKCLEAEPKNR 372
+N G V ++ RP++ + P + + I C +P R
Sbjct: 214 LSNXEIGXKVALEGLRPTIPPG------ISPHVSKLXKI------------CXNEDPAKR 255
Query: 373 PSMEEVLETLQ 383
P + ++ L+
Sbjct: 256 PKFDXIVPILE 266
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 219 KDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGY 278
+ L ++HS+ +I+RD K SN+ ++ ++ DFGLA+ + +V TR Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 279 AAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
APE + Y ++ D++ G ++ E+L G
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 180 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 234
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEML 306
+ D++ G ++ EM+
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 147 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 201
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ D++ G ++ EM+
Sbjct: 202 ILGMGYKENVDLWSVGCIMGEMVC 225
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + T + T Y APE
Sbjct: 136 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEV 190
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ D++ G ++ EM+
Sbjct: 191 ILGMGYKENVDLWSVGCIMGEMVC 214
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
HPN+V+ +V EY G L + G + I +++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG---VSY 130
Query: 224 LHSSEKSVIYRDFKASNILLDGS--YNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
H+ + V +RD K N LLDGS K++DFG +K + +GT Y AP
Sbjct: 131 AHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA---VGTPAYIAP 185
Query: 282 EYVATGHLYVK-SDVYGFGVVLLEMLTG 308
E + K +DV+ GV L ML G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ DF LA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ FGLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 176 EDRQFLLVYEYMQKGSLENHL--FRKGSAEPLP--WNTRLKIAIDAAKDLTFLHSSEKSV 231
+D LV +Y G L L F E + + + IAID+ L ++H
Sbjct: 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH------ 198
Query: 232 IYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVAT----- 286
RD K NIL+D + + +L+DFG + L ++ + ++ +GT Y +PE +
Sbjct: 199 --RDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 287 GHLYVKSDVYGFGVVLLEMLTG 308
G + D + GV + EML G
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYG 277
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ D GLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 38/234 (16%)
Query: 93 DLRAATKNFRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQ-GLRE 151
DL + + +P LG GG G VF VD+ ++P S++ LRE
Sbjct: 8 DLGSRYMDLKP---LGCGGNGLVFSA-VDNDC-----DKRVAIKKIVLTDPQSVKHALRE 58
Query: 152 WQAEVKFLGKFSHPNLVKL--------------IGYCWEDRQFLLVYEYMQKGSLENHLF 197
+K + + H N+VK+ +G E +V EYM+ L N +
Sbjct: 59 ----IKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLAN-VL 112
Query: 198 RKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGS-YNAKLSDFGL 256
+G L + RL + L ++HS+ +V++RD K +N+ ++ K+ DFGL
Sbjct: 113 EQGPL--LEEHARL-FMYQLLRGLKYIHSA--NVLHRDLKPANLFINTEDLVLKIGDFGL 167
Query: 257 AK-LGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTG 308
A+ + P + + + T Y +P + + + Y K+ D++ G + EMLTG
Sbjct: 168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
HPN+V+ +V EY G L + G + I +++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG---VSY 130
Query: 224 LHSSEKSVIYRDFKASNILLDGS--YNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
H+ + V +RD K N LLDGS K+ FG +K + T +GT Y AP
Sbjct: 131 CHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAYIAP 185
Query: 282 EYVATGHLYVK-SDVYGFGVVLLEMLTG 308
E + K +DV+ GV L ML G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 33/218 (15%)
Query: 101 FRPDTMLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLG 160
+R T LGEG +G V+K +D T P + +RE V L
Sbjct: 36 YRRITKLGEGTYGEVYKA-IDTVTNETVAIKRIRLEHEEEGVPGT--AIRE----VSLLK 88
Query: 161 KFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKD 220
+ H N+++L + + L++EY EN L + P + +++
Sbjct: 89 ELQHRNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMDKNP---DVSMRVIKSFLYQ 140
Query: 221 LT----FLHSSEKSVIYRDFKASNILLDGSYNA-----KLSDFGLAKLG--PIDGNSHVT 269
L F HS + ++RD K N+LL S + K+ DFGLA+ PI +H
Sbjct: 141 LINGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI 198
Query: 270 TRIMGTYGYAAPE-YVATGHLYVKSDVYGFGVVLLEML 306
T Y PE + + H D++ + EML
Sbjct: 199 I----TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ D GLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA-----EPLPWNT 209
E HP++V+L+ D +V+E+M L + ++ A E + +
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA---KLSDFGLA-KLGPIDGN 265
+I + L + H + ++I+RD K +LL N+ KL FG+A +LG +
Sbjct: 138 MRQIL----EALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE---S 188
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
V +GT + APE V DV+G GV+L +L+G
Sbjct: 189 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 37/126 (29%)
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKL----------------------G 260
F+H E +I+RD K +N LL+ + K+ DFGLA+ G
Sbjct: 146 FIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 261 PIDGN------SHVTTRIMGTYGYAAPEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALD 313
P + N SHV TR Y APE + Y S D++ G + E+L +++
Sbjct: 204 PHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS-H 257
Query: 314 TNRPSG 319
N P+
Sbjct: 258 INNPTN 263
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 25/216 (11%)
Query: 101 FRPDTMLGEGGFGRVFKGW--VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+ D+++G+G FG+V K + V+ + +A N + L + Q EV+
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVA----------IKIIKNKKAF--LNQAQIEVRL 84
Query: 159 LGKFSHPN------LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
L + + +V L + LV+E + + L R + + N K
Sbjct: 85 LELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYD--LLRNTNFRGVSLNLTRK 142
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
A L FL + E S+I+ D K NILL N K S + G +
Sbjct: 143 FAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQX 199
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ + Y +PE + + D++ G +L+EM TG
Sbjct: 200 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAA 280
L ++HS++ +I+RD K SN+ ++ K+ D GLA+ + +V TR Y A
Sbjct: 138 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRA 190
Query: 281 PEYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHV 322
PE + Y ++ D++ G ++ E+LTG T P +H+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG----RTLFPGTDHI 229
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 155 EVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSA-----EPLPWNT 209
E HP++V+L+ D +V+E+M L + ++ A E + +
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 210 RLKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNA---KLSDFGLA-KLGPIDGN 265
+I + L + H + ++I+RD K +LL N+ KL FG+A +LG +
Sbjct: 136 MRQIL----EALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE---S 186
Query: 266 SHVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
V +GT + APE V DV+G GV+L +L+G
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ N +T ++ Y Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAC--TNFMMTPYVVTRY-YRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ E++ G
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
HPN+V+ +V EY G L + G + I +++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG---VSY 130
Query: 224 LHSSEKSVIYRDFKASNILLDGS--YNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
H+ + V +RD K N LLDGS K+ FG +K + T +GT Y AP
Sbjct: 131 CHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAYIAP 185
Query: 282 EYVATGHLYVK-SDVYGFGVVLLEMLTG 308
E + K +DV+ GV L ML G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 25/216 (11%)
Query: 101 FRPDTMLGEGGFGRVFKGW--VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+ D+++G+G FG+V K + V+ + +A N + L + Q EV+
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVA----------IKIIKNKKAF--LNQAQIEVRL 103
Query: 159 LGKFSHPN------LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
L + + +V L + LV+E + + L R + + N K
Sbjct: 104 LELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYD--LLRNTNFRGVSLNLTRK 161
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRI 272
A L FL + E S+I+ D K NILL N K S + G +
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQX 218
Query: 273 MGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
+ + Y +PE + + D++ G +L+EM TG
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 178 RQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFK 237
R L++ E M+ G L + + +G + +I D + FLHS ++ +RD K
Sbjct: 80 RCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH--NIAHRDVK 136
Query: 238 ASNILLDGSYN---AKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSD 294
N+L KL+DFG AK + + T Y APE + D
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 192
Query: 295 VYGFGVVLLEMLTGLRALDTN 315
++ GV++ +L G +N
Sbjct: 193 MWSLGVIMYILLCGFPPFYSN 213
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 111/278 (39%), Gaps = 41/278 (14%)
Query: 106 MLGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKFS-- 163
+LG GGFG V+ G L S+ + EV L K S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQK-GSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLT 222
+++L+ + F+L+ E M+ L + + +G+ + + ++A +
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR--- 128
Query: 223 FLHSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAP 281
H V++RD K NIL+D + KL DFG L V T GT Y+ P
Sbjct: 129 --HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPP 182
Query: 282 EYVATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKI 340
E++ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS- 233
Query: 341 MDPRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 234 -----ECQHLIRW----------CLALRPSDRPTFEEI 256
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 178 RQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTFLHSSEKSVIYRDFK 237
R L++ E M+ G L + + +G + +I D + FLHS ++ +RD K
Sbjct: 99 RCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVK 155
Query: 238 ASNILLDGSYN---AKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATGHLYVKSD 294
N+L KL+DFG AK + + T Y APE + D
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 295 VYGFGVVLLEMLTGLRALDTN 315
++ GV++ +L G +N
Sbjct: 212 MWSLGVIMYILLCGFPPFYSN 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 164 HPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKDLTF 223
HP V+L WE+ L + + SL+ H G++ LP D L
Sbjct: 116 HPCCVRL-EQAWEEGGILYLQTELCGPSLQQHCEAWGAS--LPEAQVWGYLRDTLLALAH 172
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFG-LAKLGPIDGNSHVTTRIMGTYGYAAPE 282
LHS + +++ D K +NI L KL DFG L +LG G V G Y APE
Sbjct: 173 LHS--QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG-TAGAGEVQE---GDPRYMAPE 226
Query: 283 YVATGHLYVKSDVYGFGVVLLEM 305
+ G +DV+ G+ +LE+
Sbjct: 227 LL-QGSYGTAADVFSLGLTILEV 248
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ D++ G ++ EM+
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVC 220
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 13/163 (7%)
Query: 151 EWQAEVKFLGKFSHPNLVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTR 210
E + E+ + + H NL++L +LV EY+ G L + + + +N
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDES------YNLT 185
Query: 211 LKIAIDAAKDLT--FLHSSEKSVIYRDFKASNILL--DGSYNAKLSDFGLAKLGPIDGNS 266
I K + H + +++ D K NIL + K+ DFGLA+
Sbjct: 186 ELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGL 309
V GT + APE V + +D++ GV+ +L+GL
Sbjct: 246 KVN---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ N +T ++ Y Y APE
Sbjct: 140 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRY-YRAPEV 194
Query: 284 VATGHLYVKSDVYGFGVVLLEMLTG 308
+ D++ G ++ E++ G
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 101 FRPDTMLGEGGFGRVFKGW--VDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKF 158
+ D+++G+G FG+V K + V+ + +A N + L + Q EV+
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVA----------IKIIKNKKAF--LNQAQIEVRL 103
Query: 159 LGKFSHPN------LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLK 212
L + + +V L + LV+E + + L R + + N K
Sbjct: 104 LELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYD--LLRNTNFRGVSLNLTRK 161
Query: 213 IAIDAAKDLTFLHSSEKSVIYRDFKASNILLDG--SYNAKLSDFGLA-KLGPIDGNSHVT 269
A L FL + E S+I+ D K NILL K+ DFG + +LG +
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLG-----QRIY 216
Query: 270 TRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTG 308
I + Y +PE + + D++ G +L+EM TG
Sbjct: 217 QXIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 224 LHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
LHS+ +I+RD K SNI++ K+ DFGLA+ G S + + T Y APE
Sbjct: 142 LHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVVTRYYRAPEV 196
Query: 284 VATGHLYVKSDVYGFGVVLLEMLT 307
+ D++ G ++ EM+
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMVC 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 19/151 (12%)
Query: 168 VKLIGYCWEDRQFL-LVYEYMQKGSLENHL--FRKGSAEPLP--WNTRLKIAIDAAKDLT 222
+ + Y ++D L LV +Y G L L F E + + + +AID+ L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 223 FLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPE 282
++H RD K N+LLD + + +L+DFG DG + + GT Y +PE
Sbjct: 212 YVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPE 262
Query: 283 YV-----ATGHLYVKSDVYGFGVVLLEMLTG 308
+ G + D + GV + EML G
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 211 LKIAIDAAKDLTFLHSSEKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTT 270
+ +AID+ L ++H RD K N+LLD + + +L+DFG DG +
Sbjct: 184 MVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV 235
Query: 271 RIMGTYGYAAPEYV-----ATGHLYVKSDVYGFGVVLLEMLTG 308
+ GT Y +PE + G + D + GV + EML G
Sbjct: 236 AV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 180
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSX--- 229
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 230 ---ECQHLIRW----------CLALRPSDRPTFEEI 252
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 120/321 (37%), Gaps = 61/321 (19%)
Query: 107 LGEGGFGRVFKGWVDHKTLAPTXXXXXXXXXXXXSNPDSIQGLREWQAEVKFLGKF--SH 164
LGEG FG+V + +DHK N D + ++E++ L +
Sbjct: 22 LGEGAFGKVVEC-IDHKA------GGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTD 72
Query: 165 PN----LVKLIGYCWEDRQFLLVYEYMQKGSLENHLFRKGSAEPLPWNTRLKIAIDAAKD 220
PN V+++ + +V+E + + + ++ P + K+A K
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD--FIKENGFLPFRLDHIRKMAYQICKS 130
Query: 221 LTFLHSSEKSVIYRDFKASNILLDGS-----YNAKLS---------DFGLAKLGPIDGNS 266
+ FLHS++ + + D K NIL S YN K+ D + G +
Sbjct: 131 VNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 267 HVTTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTNRPSGEH----- 321
+ ++ T Y APE + DV+ G +L+E G T+ S EH
Sbjct: 189 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH-DSKEHLAMME 247
Query: 322 -VLVDFARPSLTDKRRLKKIMDPRLE-------------EQYPIKGALLAGQI------- 360
+L + + R+ K RL+ P+K +L+ +
Sbjct: 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFD 307
Query: 361 -IIKCLEAEPKNRPSMEEVLE 380
I K LE +P R ++ E L+
Sbjct: 308 LIQKMLEYDPAKRITLREALK 328
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 183
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 232
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 233 ---ECQHLIRW----------CLALRPSDRPTFEEI 255
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 180
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 229
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 230 ---ECQHLIRW----------CLALRPSDRPTFEEI 252
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 227
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 276
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 277 ---ECQHLIRW----------CLALRPSDRPTFEEI 299
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 185
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 234
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 235 ---ECQHLIRW----------CLALRPSDRPTFEEI 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 184
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 233
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 234 ---ECQHLIRW----------CLALRPSDRPTFEEI 256
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 60/148 (40%), Gaps = 21/148 (14%)
Query: 173 YCWEDRQFL-LVYEYMQKGSLENHLFRKGSAEPLP----WNTRLKIAIDAAKDLTFLHSS 227
+ ++D +L LV EY G L L + G P + + +AID+ L ++H
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH-- 185
Query: 228 EKSVIYRDFKASNILLDGSYNAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEYVATG 287
RD K NILLD + +L+DFG DG + GT Y +PE +
Sbjct: 186 ------RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAV 238
Query: 288 HLYV-------KSDVYGFGVVLLEMLTG 308
+ D + GV EM G
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYG 266
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 199
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 248
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 249 ---ECQHLIRW----------CLALRPSDRPTFEEI 271
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 212
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 261
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 262 ---ECQHLIRW----------CLALRPSDRPTFEEI 284
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 185
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 234
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 235 ---ECQHLIRW----------CLALRPSDRPTFEEI 257
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 199
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSX--- 248
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 249 ---ECQHLIRW----------CLALRPSDRPTFEEI 271
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 200
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 249
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 250 ---ECQHLIRW----------CLALRPSDRPTFEEI 272
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 200
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSX--- 249
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 250 ---ECQHLIRW----------CLALRPSDRPTFEEI 272
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 227
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 276
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 277 ---ECQHLIRW----------CLALRPSDRPTFEEI 299
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 219
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 268
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 269 ---ECQHLIRW----------CLALRPSDRPTFEEI 291
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 185
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSS--- 234
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 235 ---ECQHLIRW----------CLALRPSDRPTFEEI 257
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 225 HSSEKSVIYRDFKASNILLDGSY-NAKLSDFGLAKLGPIDGNSHVTTRIMGTYGYAAPEY 283
H V++RD K NIL+D + KL DFG L V T GT Y+ PE+
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 207
Query: 284 VATGHLYVKS-DVYGFGVVLLEMLTGLRALDTNRPSGEHVLVDFARPSLTDKRRLKKIMD 342
+ + +S V+ G++L +M+ G D E ++ R + ++R+
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII----RGQVFFRQRVSX--- 256
Query: 343 PRLEEQYPIKGALLAGQIIIKCLEAEPKNRPSMEEV 378
E Q+ I+ CL P +RP+ EE+
Sbjct: 257 ---ECQHLIRW----------CLALRPSDRPTFEEI 279
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,381,833
Number of Sequences: 62578
Number of extensions: 567319
Number of successful extensions: 4167
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 231
Number of HSP's that attempted gapping in prelim test: 1650
Number of HSP's gapped (non-prelim): 1227
length of query: 441
length of database: 14,973,337
effective HSP length: 102
effective length of query: 339
effective length of database: 8,590,381
effective search space: 2912139159
effective search space used: 2912139159
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)