BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013521
(441 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 605 bits (1561), Expect = e-173, Method: Compositional matrix adjust.
Identities = 284/443 (64%), Positives = 353/443 (79%), Gaps = 10/443 (2%)
Query: 1 MYVDQVHPKCSTTPL--KATVPFTMDFFLSSRWPVPRHCTEVSRNVNMESLQSGYLFPEI 58
M+ P CS+ KA++ F M S T++ RNVN+E L++ YLFPEI
Sbjct: 5 MFFSSASPLCSSPSKIPKASLDFEMKKLGGS--------TKLVRNVNLEKLKNNYLFPEI 56
Query: 59 SMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMA 118
+ RE EHI KHP+ +LI LG GDTT+PIP+ ITS M+ A LSTV+GY+GYG EQGN
Sbjct: 57 NRRELEHIEKHPNVQLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKT 116
Query: 119 LRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIV 178
LR AIA+ FY+D+ ++ +E+F+SDGAQSDISRLQ+LLGSNVT+AVQDP+FPAYID+SVI+
Sbjct: 117 LRKAIAETFYRDLHVKSNEVFVSDGAQSDISRLQLLLGSNVTIAVQDPTFPAYIDSSVII 176
Query: 179 GQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKK 238
GQ G F ++T KY+N+VYM C P N+FFPDL+ T RTD+IFFCSPNNPTG+ A+ +QL +
Sbjct: 177 GQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGYVASRKQLHQ 236
Query: 239 LVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298
LV+FAK NGSII++DSAYAA+I D SPRSIYEIPGAREVAIE+SSFSKFAGFTGVRLGW+
Sbjct: 237 LVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWS 296
Query: 299 VVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENA 358
++P+EL YSNG+P+I DF+RIV T FNGASNI QAGGLACLS G + +R+V +YYKEN
Sbjct: 297 IIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACLSSGGLKEIRSVNNYYKENR 356
Query: 359 KIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEH 418
KI++D SLGLKV GG NAPY+WV F GS SWDVF EILE THI+T+PGSGFGPGG E+
Sbjct: 357 KILMDTLVSLGLKVYGGVNAPYLWVHFKGSKSWDVFNEILENTHIITVPGSGFGPGGEEY 416
Query: 419 IRVSAFGHREYISEACRRLKNFL 441
+R+S FG R++I EA +RL+NF
Sbjct: 417 LRISGFGRRDHIVEASKRLQNFF 439
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 581 bits (1498), Expect = e-166, Method: Compositional matrix adjust.
Identities = 281/403 (69%), Positives = 332/403 (82%)
Query: 38 TEVSRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEH 97
T+VSRN NM LQ+GYLFPEI+ R S H+ K+PDA++I LGIGDTT+PIP++ITSAMA+
Sbjct: 22 TKVSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKK 81
Query: 98 AFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGS 157
A LST++GY GYGAEQG LR AIA FY +GI D++F+SDGA+ DISRLQ++ GS
Sbjct: 82 AHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMFGS 141
Query: 158 NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDI 217
NVT+AVQDPS+PAY+D+SVI+GQ G+F + KY NI YM C PEN FFPDLST RTDI
Sbjct: 142 NVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDI 201
Query: 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREV 277
IFFCSPNNPTG AAT +QL +LVEFAK NGSIIVYDSAYA Y++D +PRSI+EIPGA EV
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 278 AIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLA 337
A+E +SFSK+AGFTGVRLGWTV+P++L YS+G+PV KDFNRI+CTCFNGASNI QAG LA
Sbjct: 262 AMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALA 321
Query: 338 CLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEI 397
CL+P+G +A+ VI +YKEN II+D F SLG V GGKNAPYVWV FP SSWDVFAEI
Sbjct: 322 CLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEI 381
Query: 398 LEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440
LEKTH++T PGSGFGPGG +RVSAFGHRE I EACRR K
Sbjct: 382 LEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQL 424
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 580 bits (1495), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/403 (69%), Positives = 332/403 (82%)
Query: 38 TEVSRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEH 97
T+VSRN NM LQ+GYLFPEI+ R S H+ K+PDA++I LGIGDTT+PIP++ITSAMA+
Sbjct: 22 TKVSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKK 81
Query: 98 AFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGS 157
A LST++GY GYGAEQG LR AIA FY +GI D++F+SDGA+ DISRLQ++ GS
Sbjct: 82 AHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMFGS 141
Query: 158 NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDI 217
NVT+AVQDPS+PAY+D+SVI+GQ G+F + KY NI YM C PEN FFPDLST RTDI
Sbjct: 142 NVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDI 201
Query: 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREV 277
IFFCSPNNPTG AAT +QL +LVEFAK NGSIIVYDSAYA Y++D +PRSI+EIPGA EV
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 278 AIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLA 337
A+E +SFS++AGFTGVRLGWTV+P++L YS+G+PV KDFNRI+CTCFNGASNI QAG LA
Sbjct: 262 AMETASFSQYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALA 321
Query: 338 CLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEI 397
CL+P+G +A+ VI +YKEN II+D F SLG V GGKNAPYVWV FP SSWDVFAEI
Sbjct: 322 CLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEI 381
Query: 398 LEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440
LEKTH++T PGSGFGPGG +RVSAFGHRE I EACRR K
Sbjct: 382 LEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQL 424
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 579 bits (1492), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/403 (69%), Positives = 331/403 (82%)
Query: 38 TEVSRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEH 97
T+VSRN NM LQ+GYLFPEI+ R S H+ K+PDA++I LGIGDTT+PIP++ITSAMA+
Sbjct: 22 TKVSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKK 81
Query: 98 AFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGS 157
A LST++GY GYGAEQG LR AIA FY +GI D++F+SDGA+ DISRLQ++ GS
Sbjct: 82 AHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMFGS 141
Query: 158 NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDI 217
NVT+AVQDPS+PAY+D+SVI+GQ G+F + KY NI YM C PEN FFPDLST RTDI
Sbjct: 142 NVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDI 201
Query: 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREV 277
IFFCSPNNPTG AAT +QL +LVEFAK NGSIIVYDSAYA Y++D +PRSI+EIPGA EV
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 278 AIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLA 337
A+E +SFS +AGFTGVRLGWTV+P++L YS+G+PV KDFNRI+CTCFNGASNI QAG LA
Sbjct: 262 AMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALA 321
Query: 338 CLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEI 397
CL+P+G +A+ VI +YKEN II+D F SLG V GGKNAPYVWV FP SSWDVFAEI
Sbjct: 322 CLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEI 381
Query: 398 LEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440
LEKTH++T PGSGFGPGG +RVSAFGHRE I EACRR K
Sbjct: 382 LEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQL 424
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 567 bits (1462), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 324/403 (80%)
Query: 38 TEVSRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEH 97
T+VSRN N LQ+GYLFPEI+ R S H+ K+PDA++I LGIGDTT+PIP++ITSA A+
Sbjct: 22 TKVSRNSNXSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAXAKK 81
Query: 98 AFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGS 157
A LST++GY GYGAEQG LR AIA FY +GI D++F+SDGA+ DISRLQ+ GS
Sbjct: 82 AHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVXFGS 141
Query: 158 NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDI 217
NVT+AVQDPS+PAY+D+SVI GQ G+F + KY NI Y C PEN FFPDLST RTDI
Sbjct: 142 NVTIAVQDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEYXRCTPENGFFPDLSTVGRTDI 201
Query: 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREV 277
IFFCSPNNPTG AAT +QL +LVEFAK NGSIIVYDSAYA Y +D +PRSI+EIPGA EV
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEV 261
Query: 278 AIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLA 337
A E +SFSK+AGFTGVRLGWTV+P++L YS+G+PV KDFNRI+CTCFNGASNI QAG LA
Sbjct: 262 AXETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALA 321
Query: 338 CLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEI 397
CL+P+G +A VI +YKEN II+D F SLG V GGKNAPYVWV FP SSWDVFAEI
Sbjct: 322 CLTPEGLEAXHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEI 381
Query: 398 LEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440
LEKTH++T PGSGFGPGG +RVSAFGHRE I EACRR K
Sbjct: 382 LEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQL 424
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/401 (61%), Positives = 301/401 (75%), Gaps = 3/401 (0%)
Query: 39 EVSRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHA 98
+V RN N L++GYLFPEI+ R H K+PDA++I LGIGDTT+P+P I AMA+ A
Sbjct: 36 DVQRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAA 95
Query: 99 FALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSN 158
L+T +GY GYGAEQG ALR A+A FY G DEIFISDG++ DI+R+QM+ GS
Sbjct: 96 AGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARIQMMFGSK 155
Query: 159 VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDII 218
TVAVQDPS+P Y+DTSV++G G TG + I YM C P+N+FFPDLS RTDII
Sbjct: 156 PTVAVQDPSYPVYVDTSVMMGMTGDH-NGTG-FDGIEYMVCNPDNHFFPDLSKAKRTDII 213
Query: 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREV 277
FFCSPNNPTG AAT QL +LV FA+ NGSI+VYD+AYA YI++P P++IYEIPGA EV
Sbjct: 214 FFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEV 273
Query: 278 AIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLA 337
AIE SFSK+AGFTGVRLGWTVVP+ L+Y+NG PV D+NR++ TCFNGASNIVQAGGLA
Sbjct: 274 AIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLA 333
Query: 338 CLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEI 397
CL P+G + + +I +YKENA+I+ F +G V GG +APY+WV FPG SWDVFAEI
Sbjct: 334 CLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFPGKPSWDVFAEI 393
Query: 398 LEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLK 438
LE+ +I+T PGSG+GP G +R SAFG RE I EA RR K
Sbjct: 394 LERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFK 434
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 308 bits (788), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 167/402 (41%), Positives = 241/402 (59%), Gaps = 18/402 (4%)
Query: 40 VSRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAF 99
+ RN + SL YLF ++ R ++ ++P +I L IGDTTQP+ + A A
Sbjct: 1 MKRNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIA 60
Query: 100 ALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNV 159
LS+ +GYG + G ALR +++ FY+ ++ EIFISDGA+ D+ RL G N
Sbjct: 61 RLSSPTTCRGYGPDFGLPALRQKLSEDFYRGF-VDAKEIFISDGAKVDLFRLLSFFGPNQ 119
Query: 160 TVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIF 219
TVA+QDPS+PAY+D + + G + I+ + C EN FFP+ + DI+
Sbjct: 120 TVAIQDPSYPAYLDIARLTGA-----------KEIIALPCLQENAFFPEFPEDTHIDILC 168
Query: 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVA 278
CSPNNPTG QL+ +V +A + +I++D+AY+ +I+DPS P+SI+EIP AR A
Sbjct: 169 LCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCA 228
Query: 279 IEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLAC 338
IEI+SFSK GF G+RLGWTV+P+EL Y++G+ VI+D+ R + T FNGAS Q G+A
Sbjct: 229 IEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAG 288
Query: 339 LSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGS--SSWDVFAE 396
LS I YY+EN+ ++ A + G +V GG++APY+WV+ + S D+F
Sbjct: 289 LS---ILPQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANISDRDLFDF 345
Query: 397 ILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLK 438
L + HI PG GFG G+ +R S+ G RE I AC RL+
Sbjct: 346 FLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQ 387
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 169/380 (44%), Gaps = 41/380 (10%)
Query: 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI 133
+I L +G+ P P I + A T GY +G LR AI+ + +
Sbjct: 39 IIDLSMGNPDGPTPPHIVEKLCTVAQREDT----HGYSTSRGIPRLRRAISHWYRDRYDV 94
Query: 134 EGD---EIFISDGAQSDISRLQM-LLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETG 189
+ D E ++ G++ ++ L + L T+ V +PS+P +I +VI G
Sbjct: 95 QIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAG---------A 145
Query: 190 KYRNIVYMNCRPENNFFPDLSTTSRTDI-----IFFCSPNNPTGHAATWQQLKKLVEFAK 244
+ R++ + P +FF +L R I + P+NPT +++V AK
Sbjct: 146 QVRSVPLV---PGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAK 202
Query: 245 ANGSIIVYDSAYAAYITD--PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302
++V+D AYA + D +P SI ++PGA+++A+E + SK G R+G+ V
Sbjct: 203 QYDVMVVHDLAYADIVYDGWKAP-SIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP 261
Query: 303 ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIV 362
EL + RI G +Q +A L D Q +R + Y++ ++V
Sbjct: 262 EL--------VSALARIKSYHDYGTFTPLQVAAIAALEGDQ-QCVRDIARQYQQRRDVLV 312
Query: 363 DAFQSLGLKVNGGKNAPYVWVQFPGS----SSWDVFAEILEKTHILTIPGSGFGPGGNEH 418
+ G V K + YVW + P S + ++L+ + PG GFG G++H
Sbjct: 313 KGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDH 372
Query: 419 IRVSAFGHREYISEACRRLK 438
+R + +R+ + +A R +K
Sbjct: 373 VRFALIENRDRLRQAVRGIK 392
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 160/375 (42%), Gaps = 26/375 (6%)
Query: 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI 133
+I LGIG+ PD T + + KG YG G + LR AIA+K K GI
Sbjct: 27 VISLGIGE-----PDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGI 81
Query: 134 EGD---EIFISDGA-QSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETG 189
E D EI + GA Q+ + L L V + P+F +Y ++ G GK ++
Sbjct: 82 EADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAG--GKPVEVPT 139
Query: 190 KYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSI 249
+ +N + T +T + SP NPTG T + L+++ +F + I
Sbjct: 140 YEEDEFRLNVDELKKY-----VTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLI 194
Query: 250 IVYDSAYAAYITDPSPR-SIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN 308
++ D Y +I D + SI + G E I ++ FSK TG RLG+ P S
Sbjct: 195 VISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP-----SW 249
Query: 309 GYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368
+ F TC + I A A ++A+ + Y K++ +
Sbjct: 250 IIERMVKFQMYNATC--PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 307
Query: 369 GLKVNGGKNAPYVW--VQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGH 426
GL K A Y++ ++ G +S +L++ + +PGS FG G ++R+S
Sbjct: 308 GLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATA 367
Query: 427 REYISEACRRLKNFL 441
E + EA R++ L
Sbjct: 368 YEKLEEAMERMERVL 382
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 160/375 (42%), Gaps = 26/375 (6%)
Query: 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI 133
+I LGIG+ PD T + + KG YG G + LR AIA+K K GI
Sbjct: 28 VISLGIGE-----PDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGI 82
Query: 134 EGD---EIFISDGA-QSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETG 189
E D EI + GA Q+ + L L V + P+F +Y ++ G GK ++
Sbjct: 83 EADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAG--GKPVEVPT 140
Query: 190 KYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSI 249
+ +N + T +T + SP NPTG T + L+++ +F + I
Sbjct: 141 YEEDEFRLNVDELKKY-----VTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLI 195
Query: 250 IVYDSAYAAYITDPSPR-SIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN 308
++ D Y +I D + SI + G E I ++ FSK TG RLG+ P S
Sbjct: 196 VISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP-----SW 250
Query: 309 GYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368
+ F TC + I A A ++A+ + Y K++ +
Sbjct: 251 IIERMVKFQMYNATC--PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 308
Query: 369 GLKVNGGKNAPYVW--VQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGH 426
GL K A Y++ ++ G +S +L++ + +PGS FG G ++R+S
Sbjct: 309 GLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATA 368
Query: 427 REYISEACRRLKNFL 441
E + EA R++ L
Sbjct: 369 YEKLEEAMDRMERVL 383
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 157/387 (40%), Gaps = 50/387 (12%)
Query: 68 KHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKF 127
+H LI +G P P + +H T+ + YGA G A + AI D +
Sbjct: 43 EHGPLPLINXAVGIPDGPTP----QGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFY 98
Query: 128 YKDMGI---EGDEIFISDGAQSDISRLQM-LLGSNVTVAVQDPSFPAYIDTSVIVGQAGK 183
+ + + DE+ I G ++ + + ++ V + DP + Y+ AG
Sbjct: 99 QRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYL--------AGV 150
Query: 184 FLKETGKYRNIVYMNCRPENNFFPDLSTTS-----RTDIIFFCSPNNPTGHAATWQQLKK 238
L + GK V +N P + + PD S +T +I+ PNNPTG AT + +
Sbjct: 151 LLAD-GK---PVPLNLEPPH-YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDE 205
Query: 239 LVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298
+ K + IV+D AY A+ D SI ++VAIEI S SK +G R+G+
Sbjct: 206 AIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFA 265
Query: 299 VVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENA 358
V N+ AG L AL D+ +E +
Sbjct: 266 VG----------------NKDXIQALKKYQTHTNAGXFGALQDAAIYALNHYDDFLEEQS 309
Query: 359 KIIV---DAFQSLGLKVN----GGKNAPYVWVQFPGSSSWDVFAEIL-EKTHILTIPGSG 410
+ D F++ K + K YVW++ P + F + L ++ IL PG
Sbjct: 310 NVFKTRRDRFEAXLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKP 369
Query: 411 FGPGGNEHIRVSAFGHREYISEACRRL 437
FG GN ++R+S + + EA RL
Sbjct: 370 FGENGNRYVRISLALDDQKLDEAAIRL 396
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 148/347 (42%), Gaps = 48/347 (13%)
Query: 75 IRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE 134
+ LG G + P P + A+ + Y G ALR A+A++F +E
Sbjct: 28 VNLGQGFPSNPPPPFLLEAVRR------ALGRQDQYAPPAGLPALREALAEEF----AVE 77
Query: 135 GDEIFISDGAQSDI-SRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRN 193
+ + ++ GA + LQ L+G V V +P F Y+ + + G +
Sbjct: 78 PESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKAR---------- 127
Query: 194 IVYMNCRPENNFFPDLST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGS 248
+V ++ PE F DLS T RT + +P NPTG ++L+ + A+A+
Sbjct: 128 LVRLDLTPEG-FRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDL 186
Query: 249 IIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN 308
++ D Y PR + E A E + S K TG R+GW V P+E
Sbjct: 187 FLISDEVYDELYYGERPRRLREF--APERTFTVGSAGKRLEATGYRVGWIVGPKEF---- 240
Query: 309 GYPVIKDFNRIVCTCFNGASNIVQAG---GLACLSPDGF-QALRTVIDYYKENAKIIVDA 364
P + + T F+ A +QAG L +GF +ALR + Y+ ++
Sbjct: 241 -MPRLAGMRQ--WTSFS-APTPLQAGVAEALKLARREGFYEALR---EGYRRRRDLLAGG 293
Query: 365 FQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGF 411
+++GL+V + ++ + PG WD F ++E+ + IP S F
Sbjct: 294 LRAMGLRVYVPEGTYFLMAELPG---WDAF-RLVEEARVALIPASAF 336
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 170/397 (42%), Gaps = 50/397 (12%)
Query: 57 EISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGN 116
E+ + I+K D +I L G+ P P+ + E A KG Y +G
Sbjct: 28 ELDAKAKALIKKGED--VINLTAGEPDFPTPE----PVVEEAVRFLQ-KGEVKYTDPRGI 80
Query: 117 MALRTAIA----DKFYKDMGIEGDEIFISDGA-QSDISRLQMLLGSNVTVAVQDPSFPAY 171
LR IA +++ KD I D++ +++GA Q+ + LL V V P + +Y
Sbjct: 81 YELREGIAKRIGERYKKD--ISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSY 138
Query: 172 IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTS-----RTDIIFFCSPNNP 226
I ++ G ++ +M+ NF P L +T + SPNNP
Sbjct: 139 IPQIILAGGTVNVVE--------TFMS----KNFQPSLEEVEGLLVGKTKAVLINSPNNP 186
Query: 227 TGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSK 286
TG + L+ LV AK I+ D Y + + SI ++ + + I+ FSK
Sbjct: 187 TGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSK 246
Query: 287 FAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQA 346
TG R+G+ + E++ + + +C N + Q L L D
Sbjct: 247 SHSMTGWRVGYLISSEKVATA-----VSKIQSHTTSCIN---TVAQYAALKALEVDNSYM 298
Query: 347 LRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDV-FAE-ILEKTHIL 404
++T +KE +V+ + +G+K + A Y++ + G DV F E +LE+ +
Sbjct: 299 VQT----FKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRGD---DVKFCERLLEEKKVA 351
Query: 405 TIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441
+PGS F G +R+S E ++EA R+++FL
Sbjct: 352 LVPGSAFLKPG--FVRLSFATSIERLTEALDRIEDFL 386
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 165/419 (39%), Gaps = 72/419 (17%)
Query: 41 SRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGD----TTQPIPDIITSAMAE 96
R +N ES + + ESE ++I L IG+ T +PI D ++ E
Sbjct: 4 KRLLNFESFEVMDILALAQKLESEG------KKVIHLEIGEPDFNTPKPIVDEGIKSLKE 57
Query: 97 HAFALSTVKGYKGYGAEQGNMALRTAIADKFYKD---MGIEGDEIFISDGAQSDIS-RLQ 152
G Y +G + LR I++ YKD I D I I+ G+ + L
Sbjct: 58 ---------GKTHYTDSRGILELREKISE-LYKDKYKADIIPDNIIITGGSSLGLFFALS 107
Query: 153 MLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIV-YMNCRPENNFFPDLST 211
++ V +Q+P +P Y +N + ++ +P F D +
Sbjct: 108 SIIDDGDEVLIQNPCYPCY--------------------KNFIRFLGAKP---VFCDFTV 144
Query: 212 TS-------RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS 264
S +T I SP+NP G +++ EFA N I+ D Y + +
Sbjct: 145 ESLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYIISDEIYNGLVYEGK 200
Query: 265 PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCF 324
S E E I I+ FS TG R+G+ + +E +I+ ++ F
Sbjct: 201 CYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISNDE--------IIEAILKLQQNLF 252
Query: 325 NGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQ 384
A I Q L + + + ++I + ++++ + G +VN A YV
Sbjct: 253 ISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYV--- 309
Query: 385 FP--GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441
FP G + ++L++ + PG GFG G +IR+S E I E R+K FL
Sbjct: 310 FPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFL 368
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 157/363 (43%), Gaps = 26/363 (7%)
Query: 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI--EGDEIFISDGA 144
PD T A + +G YG G LR AIA K +D G+ D I +++G
Sbjct: 40 PDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGG 99
Query: 145 QSDISRLQM-LLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN 203
+ I L + ++ V + P + +Y + + L T + + PE
Sbjct: 100 KQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQ----FKVSPEQ 155
Query: 204 NFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263
+ T +T ++ F +P+NPTG T +++ + + A G ++ D Y + D
Sbjct: 156 I---RQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDD 212
Query: 264 SPR-SI-YEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVC 321
+ SI P A E ++ S F+K TG R+G+ P P++K +I
Sbjct: 213 AQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGP--------VPLVKAATKIQG 264
Query: 322 TCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPY 380
+ Q G +A + ++ ++ + E + ++DA ++ GL+ A Y
Sbjct: 265 HSTSNVCTFAQYGAIAAYE-NSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFY 323
Query: 381 VW--VQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLK 438
++ + G SS D +E+L++ + T+PG+ F G ++ IR+S + I RL+
Sbjct: 324 MFPSIAKTGRSSLDFCSELLDQHQVATVPGAAF--GADDCIRLSYATDLDTIKRGMERLE 381
Query: 439 NFL 441
FL
Sbjct: 382 KFL 384
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 145/370 (39%), Gaps = 43/370 (11%)
Query: 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE---GDEIFISDG 143
PD T + A + +G Y G LR A+A+KF ++ G+ + I G
Sbjct: 41 PDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGG 100
Query: 144 AQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN 203
+Q+ + Q +L V V P + +Y + G +V + PE
Sbjct: 101 SQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV------------VVEVETLPEE 148
Query: 204 NFFPD-----LSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA 258
F PD + T RT + SPNNPTG + L+ L A + +V D Y
Sbjct: 149 GFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH 208
Query: 259 YITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDF 316
+ + S PG A E + ++ +K TG R+G+ P+E VIK
Sbjct: 209 LLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE--------VIKAM 256
Query: 317 NRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY----YKENAKIIVDAFQSLGLKV 372
+ I Q L L+ +A R ++ Y+ ++++ +LGLK
Sbjct: 257 ASVSSQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGLTALGLKA 314
Query: 373 NGGKNAPYVWVQFPGSSSWDV-FAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYIS 431
A YV + + +V AE L + + +PG+ F G H+R+S E +
Sbjct: 315 VRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYATSEENLR 372
Query: 432 EACRRLKNFL 441
+A R L
Sbjct: 373 KALERFARVL 382
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 144/370 (38%), Gaps = 43/370 (11%)
Query: 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE---GDEIFISDG 143
PD T + A + +G Y G LR A+A+KF ++ G+ + I G
Sbjct: 41 PDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGG 100
Query: 144 AQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN 203
Q+ + Q +L V V P + +Y + G +V + PE
Sbjct: 101 KQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV------------VVEVETLPEE 148
Query: 204 NFFPD-----LSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA 258
F PD + T RT + SPNNPTG + L+ L A + +V D Y
Sbjct: 149 GFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH 208
Query: 259 YITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDF 316
+ + S PG A E + ++ +K TG R+G+ P+E VIK
Sbjct: 209 LLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE--------VIKAM 256
Query: 317 NRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY----YKENAKIIVDAFQSLGLKV 372
+ I Q L L+ +A R ++ Y+ ++++ +LGLK
Sbjct: 257 ASVSSQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGLTALGLKA 314
Query: 373 NGGKNAPYVWVQFPGSSSWDV-FAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYIS 431
A YV + + +V AE L + + +PG+ F G H+R+S E +
Sbjct: 315 VRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYATSEENLR 372
Query: 432 EACRRLKNFL 441
+A R L
Sbjct: 373 KALERFARVL 382
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 145/370 (39%), Gaps = 43/370 (11%)
Query: 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE---GDEIFISDG 143
PD T + A + +G Y G LR A+A+KF ++ G+ + I G
Sbjct: 41 PDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGG 100
Query: 144 AQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN 203
+Q+ + Q +L V V P + +Y + G +V + PE
Sbjct: 101 SQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV------------VVEVETLPEE 148
Query: 204 NFFPD-----LSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA 258
F PD + T RT + SPNNPTG + L+ L A + +V D Y
Sbjct: 149 GFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH 208
Query: 259 YITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDF 316
+ + S PG A E + ++ +K TG R+G+ P+E VIK
Sbjct: 209 LLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE--------VIKAM 256
Query: 317 NRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY----YKENAKIIVDAFQSLGLKV 372
+ I Q L L+ +A R ++ Y+ ++++ +LGLK
Sbjct: 257 ASVSRQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGLTALGLKA 314
Query: 373 NGGKNAPYVWVQFPGSSSWDV-FAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYIS 431
A YV + + +V AE L + + +PG+ F G H+R+S E +
Sbjct: 315 VRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYATSEENLR 372
Query: 432 EACRRLKNFL 441
+A R L
Sbjct: 373 KALERFARVL 382
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 145/370 (39%), Gaps = 43/370 (11%)
Query: 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE---GDEIFISDG 143
PD T + A + +G Y G LR A+A+KF ++ G+ + I G
Sbjct: 41 PDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGG 100
Query: 144 AQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN 203
+Q+ + Q +L V V P + +Y + G +V + PE
Sbjct: 101 SQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV------------VVEVETLPEE 148
Query: 204 NFFPD-----LSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA 258
F PD + T RT + SPNNPTG + L+ L A + +V D Y
Sbjct: 149 GFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH 208
Query: 259 YITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDF 316
+ + S PG A E + ++ +K TG R+G+ P+E VIK
Sbjct: 209 LLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE--------VIKAM 256
Query: 317 NRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY----YKENAKIIVDAFQSLGLKV 372
+ I Q L L+ +A R ++ Y+ ++++ +LGLK
Sbjct: 257 ASVSRQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGLTALGLKA 314
Query: 373 NGGKNAPYVWVQFPGSSSWDV-FAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYIS 431
A YV + + +V AE L + + +PG+ F G H+R+S E +
Sbjct: 315 VRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYATSEENLR 372
Query: 432 EACRRLKNFL 441
+A R L
Sbjct: 373 KALERFARVL 382
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 145/370 (39%), Gaps = 43/370 (11%)
Query: 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE---GDEIFISDG 143
PD T + A + +G Y G LR A+A+KF ++ G+ + I G
Sbjct: 41 PDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGG 100
Query: 144 AQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN 203
+Q+ + Q +L V V P + +Y + G +V + PE
Sbjct: 101 SQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV------------VVEVETLPEE 148
Query: 204 NFFPD-----LSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA 258
F PD + T RT + SPNNPTG + L+ L A + +V D Y
Sbjct: 149 GFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH 208
Query: 259 YITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDF 316
+ + S PG A E + ++ +K TG R+G+ P+E VIK
Sbjct: 209 LLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE--------VIKAM 256
Query: 317 NRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY----YKENAKIIVDAFQSLGLKV 372
+ I Q L L+ +A R ++ Y+ ++++ +LGLK
Sbjct: 257 ASVSRQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGLTALGLKA 314
Query: 373 NGGKNAPYVWVQFPGSSSWDV-FAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYIS 431
A YV + + +V AE L + + +PG+ F G H+R+S E +
Sbjct: 315 VRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYATSEENLR 372
Query: 432 EACRRLKNFL 441
+A R L
Sbjct: 373 KALERFARVL 382
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 160/389 (41%), Gaps = 47/389 (12%)
Query: 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMG 132
++IRL IGD + D + A+ + +G+ YG +G LR AI ++ + G
Sbjct: 39 KVIRLNIGDPVKF--DFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNG 96
Query: 133 IE--GDEIFISDGAQSDISRLQMLLGSNV----TVAVQDPSFPAYIDTSVIVGQAGKFLK 186
++ D++ ++ LQ++ G+ + + V PS+P Y T ++ GK ++
Sbjct: 97 VDITPDDVRVTAAVTE---ALQLIFGALLDPGDEILVPGPSYPPY--TGLVKFYGGKPVE 151
Query: 187 ETGKYRNIVYMNCRPENNFFPDL-----STTSRTDIIFFCSPNNPTGHAATWQQLKKLVE 241
YR I E ++ PD+ T RT I +PNNPTG + L++++
Sbjct: 152 ----YRTI------EEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILN 201
Query: 242 FAKANGSIIVYDSAYAAYITDP---SPRSI-YEIPGAREVAIEISSFSKFAGFTGVRLGW 297
A ++ D Y + SP S+ ++P I ++ SK TG RLG+
Sbjct: 202 IAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVP-----VIVMNGLSKVYFATGWRLGY 256
Query: 298 T-VVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKE 356
V E + S I RI C N + GL L+ + KE
Sbjct: 257 MYFVDPENKLSEVREAIDRLARIRL-CPNTPAQFAAIAGLTG----PMDYLKEYMKKLKE 311
Query: 357 NAKIIVDAFQSL-GLKVNGGKNAPYVWVQF---PGSSSWDVFAEILEKTHILTIPGSGFG 412
I + G+ + A Y++ + P + + ++L H+L + GSGFG
Sbjct: 312 RRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFG 371
Query: 413 PGGNEHIRVSAFGHREYISEACRRLKNFL 441
G H R E + EA R + F+
Sbjct: 372 EYGAGHFRAVFLPPIEILEEAMDRFEKFM 400
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 143/370 (38%), Gaps = 43/370 (11%)
Query: 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE---GDEIFISDG 143
PD T + A + +G Y G LR A+A+KF ++ G+ + I G
Sbjct: 41 PDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGG 100
Query: 144 AQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN 203
Q+ + Q +L V V P + +Y + G +V + PE
Sbjct: 101 KQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV------------VVEVETLPEE 148
Query: 204 NFFPD-----LSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA 258
F PD + T RT + SPNNPTG + L+ L A + +V D Y
Sbjct: 149 GFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH 208
Query: 259 YITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDF 316
+ + S PG A E + ++ + TG R+G+ P+E VIK
Sbjct: 209 LLYEGEHFS----PGRVAPEHTLTVNGAAXAFAMTGWRIGYACGPKE--------VIKAM 256
Query: 317 NRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY----YKENAKIIVDAFQSLGLKV 372
+ I Q L L+ +A R ++ Y+ ++++ +LGLK
Sbjct: 257 ASVSSQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGLTALGLKA 314
Query: 373 NGGKNAPYVWVQFPGSSSWDV-FAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYIS 431
A YV + + +V AE L + + +PG+ F G H+R+S E +
Sbjct: 315 VRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYATSEENLR 372
Query: 432 EACRRLKNFL 441
+A R L
Sbjct: 373 KALERFARVL 382
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 139/355 (39%), Gaps = 34/355 (9%)
Query: 95 AEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD--EIFISDGAQSD-ISRL 151
A A A S GY G ALR IA + + G++ D + I+ G+ +
Sbjct: 49 AVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAF 108
Query: 152 QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST 211
L S V + P +P+Y + L+ G V + PEN P +
Sbjct: 109 TALFDSGDRVGIGAPGYPSYR----------QILRALGLVP--VDLPTAPENRLQPVPAD 156
Query: 212 TSRTDI--IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY 269
+ D+ + SP NPTG L+E A+A G+ + D Y + +
Sbjct: 157 FAGLDLAGLXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTAL 216
Query: 270 EIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASN 329
E+ V I+SFSK+ TG R+GW VVPE+ ++ RI F A +
Sbjct: 217 ELTDECYV---INSFSKYFSXTGWRVGWXVVPEDQ--------VRVVERIAQNXFICAPH 265
Query: 330 IVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGL-KVNGGKNAPYVWVQFPG- 387
Q A + D L+ +D YK N K+ ++ G ++ A YV+
Sbjct: 266 ASQV--AALAALDCDAELQANLDVYKANRKLXLERLPKAGFTRIAPPDGAFYVYADVSDL 323
Query: 388 -SSSWDVFAEILEKTHILTIPGSGFGPG-GNEHIRVSAFGHREYISEACRRLKNF 440
S AEILEK + PG F P G +R S I E RL+ F
Sbjct: 324 TDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAF 378
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 133/320 (41%), Gaps = 33/320 (10%)
Query: 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI 133
LI L IG T P P+ A+AE AL+ Y GY + + A + G+
Sbjct: 27 LIDLSIGSTDLPPPEAPLKALAE---ALNDPTTY-GYCLKSCTLPFLEEAARWYEGRYGV 82
Query: 134 EGD---EIFISDGAQSDISRLQMLLGS-NVTVAVQDPSFPAYIDTSVIVGQAGKF--LKE 187
D E G+Q ++ L + L + + + ++P+Y + + L+E
Sbjct: 83 GLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLRE 142
Query: 188 TGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANG 247
G + + PE + ++ PNNPTG A W ++ + A+ +G
Sbjct: 143 DG----LADLKAVPEGVW-------REAKVLLLNYPNNPTGAVADWGYFEEALGLARKHG 191
Query: 248 SIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYS 307
+++D+ Y + + S +PGA+E +E+ S SK G RLG+ + EE
Sbjct: 192 LWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEE---- 247
Query: 308 NGYPVIKDFNRIVCTC-FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQ 366
+ R+ FN + +++ G A +P + +R Y+E A + +A +
Sbjct: 248 ----ALARLERVKGVIDFNQYAGVLRMGVEALKTPK--EVVRGYARVYRERALGMAEALK 301
Query: 367 SLGLKVNGGKNAPYVWVQFP 386
+ L + + Y+W + P
Sbjct: 302 GV-LSLLPPRATMYLWGRLP 320
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 151/372 (40%), Gaps = 31/372 (8%)
Query: 81 DTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD---E 137
+ +Q PD + A +G Y G ALR AIA K + G + D +
Sbjct: 34 NLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSD 93
Query: 138 IFISDGAQSDI-SRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVY 196
I ++ GA + + + L+ + V DPS+ +Y + G K + + + +
Sbjct: 94 ITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDW 153
Query: 197 MNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQ--LKKLVEFAKANGSIIVYDS 254
F LS RT ++ +P+NP+ A WQQ L + + ++ D
Sbjct: 154 ------QEFAALLS--ERTRLVILNTPHNPS--ATVWQQADFAALWQAIAGHEIFVISDE 203
Query: 255 AYAAY-ITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVI 313
Y + S+ P RE A+ +SSF K TG ++G+ V P + I
Sbjct: 204 VYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAE-----I 258
Query: 314 KDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVN 373
+ ++ + N + + A L P+ + AL D+Y++ I+V+A L++
Sbjct: 259 RKVHQYLTFSVNTPAQLALADMLRA-EPEHYLALP---DFYRQKRDILVNALNESRLEIL 314
Query: 374 GGKNAPYVWVQFPGSSSWD--VFAEILEKTH-ILTIPGSGF--GPGGNEHIRVSAFGHRE 428
+ ++ V + S+ D F + L + H + IP S F P ++ IR+
Sbjct: 315 PCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKES 374
Query: 429 YISEACRRLKNF 440
+ A RL+
Sbjct: 375 TLLAAAERLRQL 386
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 145/354 (40%), Gaps = 50/354 (14%)
Query: 75 IRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIAD---KFYKDM 131
+ L IG+ P P +IT A+ +++ + Y G LR A A+ + Y +
Sbjct: 33 VPLHIGEPKHPTPKVITDALT------ASLHELEKYPLTAGLPELRQACANWLKRRYDGL 86
Query: 132 GIEGD-EIFISDGAQSDI-SRLQMLL-----GSNVTVAVQDPSFPAYIDTSVIVGQAGKF 184
++ D EI G++ + S +Q +L G + +P + Y +++ G
Sbjct: 87 TVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGG---- 142
Query: 185 LKETGKYRNIVYMNCRPENNFFPDLSTTS-----RTDIIFFCSPNNPTGHAATWQQLKKL 239
I + NC P +F PD + S RT ++F CSPNNP+G K++
Sbjct: 143 --------EIHFANC-PAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEV 193
Query: 240 VEFAKANGSIIVYDSAYAA-YITDPSP----RSIYEIPGAREVAIEISSFSKFAGFTGVR 294
+ G II D Y+ Y P ++ ++ +R+ + +S S + G+R
Sbjct: 194 FDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLR 253
Query: 295 LGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYY 354
G+ EL +K+F ++ ++G++ + + + D Q + Y
Sbjct: 254 SGFVAGDAEL--------LKNF--LLYRTYHGSAXSIPVQRASIAAWDDEQHVIDNRRLY 303
Query: 355 KENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPG 408
+E + ++ Q + V + Y+W++ P + +K I +PG
Sbjct: 304 QEKFERVIPILQQV-FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPG 356
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 148/377 (39%), Gaps = 51/377 (13%)
Query: 77 LGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMG--IE 134
IG+ + P P I+ + E +V GY + QG++ R AIA+ G
Sbjct: 40 FSIGNPSIPAPQIVNDTIKELVTDYDSV-ALHGYTSAQGDVETRAAIAEFLNNTHGTHFN 98
Query: 135 GDEIFISDGAQSDISRLQMLLGSN-----VTVAVQDPSFPAYIDTSVIVGQAGKFLKET- 188
D ++ + GA + +S L S+ +T+A P FP Y V V AG L E
Sbjct: 99 ADNLYXTXGAAASLSICFRALTSDAYDEFITIA---PYFPEY---KVFVNAAGARLVEVP 152
Query: 189 --GKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKAN 246
++ I + N + T + SPNNP+G + + +KKL + +
Sbjct: 153 ADTEHFQIDFDALEERIN--------AHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKK 204
Query: 247 GS------IIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300
I+ D Y + D + + + S+SK G R+G+ +V
Sbjct: 205 SKEIGRPIFIIADEPYREIVYDGIKVPF--VTKYYDNTLVCYSYSKSLSLPGERIGYVLV 262
Query: 301 PEEL-RYSNGYPVIKDFNR---IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKE 356
P+E+ + Y + R VC A ++ Q + C Q I+ YKE
Sbjct: 263 PDEVYDKAELYAAVCGAGRALGYVC-----APSLFQKXIVKC------QGATGDINAYKE 311
Query: 357 NAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGN 416
N ++ + +G A Y +V+ S + F E ++ +L + GFG G
Sbjct: 312 NRDLLYEGLTRIGYHCFKPDGAFYXFVKALEDDS-NAFCEKAKEEDVLIVAADGFGCPG- 369
Query: 417 EHIRVSAFGHREYISEA 433
+R+S RE I +
Sbjct: 370 -WVRISYCVDREXIKHS 385
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 148/368 (40%), Gaps = 50/368 (13%)
Query: 70 PDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK 129
P R + LGIG+ P I A+ H +L+ Y +LR A F +
Sbjct: 21 PKKRGLDLGIGEPQFETPKFIQDALKNHTHSLNI------YPKSAFEESLRAAQRGFFKR 74
Query: 130 DMGIE--GDEIFISDGAQS---DISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKF 184
IE +E+ + G++ + + N T+A +P + Y A KF
Sbjct: 75 RFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIY-------EGAAKF 127
Query: 185 LKETGKYRNIVYMNCRPENNFFPDLSTTS--RTDIIFFCSPNNPTGHAATWQQLKKLVEF 242
+K + EN+F P L+ D++ SPNNPTG + ++L V+
Sbjct: 128 IKAKS-----LLXPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKL 182
Query: 243 AKANGSIIVYDSAYAAYITDPSPRSIYE---IPG--AREVAIEISSFSKFAGFTGVRLGW 297
A + I++ D Y+ + P S+ E + G A + + I S SK + G+R G+
Sbjct: 183 ALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGF 242
Query: 298 TVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKEN 357
+ + R Y + + + A+ I +A A L + R + Y N
Sbjct: 243 --IAGDSRLLEKYKAFRAY-----LGYTSANAIQKASEAAWLDDRHAEFFRNI---YANN 292
Query: 358 AKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTH-ILTIPGSGFGPG-- 414
K+ F++ + PY + + + + FA+ L + I+T+P G
Sbjct: 293 LKLARKIFKNTLI-------YPYSFYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRI 345
Query: 415 GNEHIRVS 422
G +++R++
Sbjct: 346 GADYVRLA 353
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 147/350 (42%), Gaps = 47/350 (13%)
Query: 110 YGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL-QMLLGSNVTVAVQDPSF 168
Y +G LR +A+ +G+ +E+ I+ G+Q + + ++ L V ++ PS+
Sbjct: 70 YSPTEGYAPLRAFVAEW----IGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSY 125
Query: 169 PAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFC-SPNNPT 227
+G F + ++ + P+ + ++ R ++ S NPT
Sbjct: 126 ---------MGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPT 176
Query: 228 GHAATWQQLKKLVEFAKANGSIIVYDSAY-AAYITDPSPRSIYEIPGAREVA----IEIS 282
G K+L++ G ++V D AY Y + S++E+ ARE I +
Sbjct: 177 GGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL--AREAGYPGVIYLG 234
Query: 283 SFSKFAGFTGVRLGWTVV-PEELRYSNGYPVIKDFNRIVCTCFNGA---SNIVQAGGLAC 338
SFSK G+R+ + V PE L+ + GA + ++ +
Sbjct: 235 SFSKVLS-PGLRVAFAVAHPEALQK-------------LVQAKQGADLHTPMLNQMLVHE 280
Query: 339 LSPDGF-QALRTVIDYYKENAKIIVDAFQS---LGLKVNGGKNAPYVWVQFP-GSSSWDV 393
L +GF + L V Y+E A+ ++ A ++ K +VW++ P G S+ +
Sbjct: 281 LLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGL 340
Query: 394 FAEILEKTHILTIPGSGFGPGGNEH-IRVS-AFGHREYISEACRRLKNFL 441
F LE+ G F GG E+ +R+S A RE I+E RRL L
Sbjct: 341 FRRALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRAL 390
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 172/452 (38%), Gaps = 79/452 (17%)
Query: 57 EISMRESEHIRKHPDARLIRLGIGDTT----QPI------------PDIITS-------- 92
EI + I+K P +IR IGD QPI P+++ S
Sbjct: 49 EIELELQRGIKK-PFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAK 107
Query: 93 AMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKF-YKDMGI--EGDEIFISDGAQSDIS 149
A Y A QG +R +A +D G+ + D I+++ GA IS
Sbjct: 108 KRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGIS 167
Query: 150 RLQMLL-----GSNVTVAVQDPSFPAY--IDTSVIVGQAGKFLKETGKYRNIVYMNCRPE 202
+ +L S V + P +P Y + + + Q +L E N +N
Sbjct: 168 TILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDE----ENCWALNVNEL 223
Query: 203 NNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD 262
+ ++ +P NPTG + + ++ ++ FA ++ D Y +
Sbjct: 224 RRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYS 283
Query: 263 PSPR------SIYEIPGAREVAIEISSFSK----FAGFTGVRLGWTVVPEELRYSNGYP- 311
P R +YE+ +E++SF + G G R G+ V N +P
Sbjct: 284 PDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEV------INLHPE 337
Query: 312 ----VIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQAL----RTVIDYYKENAKIIVD 363
++K + +C +G + + + F+ +V+ + AK+ D
Sbjct: 338 IKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTED 397
Query: 364 AFQSL-GLKVNGGKNAPYVW--VQFPGSS---------SWDVF--AEILEKTHILTIPGS 409
F + G+ N + A Y + + P + + D+F ++LE+T I +PGS
Sbjct: 398 LFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGS 457
Query: 410 GFGP-GGNEHIRVSAFGHREYISEACRRLKNF 440
GFG G H R++ E + +++K+F
Sbjct: 458 GFGQREGTYHFRMTILPPVEKLKTVLQKVKDF 489
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 164/415 (39%), Gaps = 62/415 (14%)
Query: 56 PEISMRESEHIRKHPDARLIRLGIGDTT----QPIPDIITSAMAEHAFALSTVKGYKGYG 111
P ++ ++ ++ +P+ +I L IGD T P +T AM + AL + K Y GY
Sbjct: 38 PIRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKD---ALDSGK-YNGYA 93
Query: 112 AEQGNMALRTAIADKFY-KDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFP 169
G ++ R IA ++ + +E ++ ++ G I L +L + V P F
Sbjct: 94 PSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFS 153
Query: 170 AYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTS-----RTDIIFFCSPN 224
Y K L E+ +Y N PE ++ DL +T + +P+
Sbjct: 154 LY-----------KTLAESMGIEVKLY-NLLPEKSWEIDLKQLEYLIDEKTACLIVNNPS 201
Query: 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSF 284
NP G + + L+K++ A I+ D Y + YE + I S
Sbjct: 202 NPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCK---YEPLATLSTDVPILSC 258
Query: 285 SKFAG---FTGVRLGWTVVPE-------ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAG 334
A G RLGW ++ + E+R +G ++K RI+ G IVQ
Sbjct: 259 GGLAKRWLVPGWRLGWILIHDRRDIFGNEIR--DG--LVKLSQRIL-----GPCTIVQGA 309
Query: 335 --GLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWV-----QFP 386
+ C +P F + + K NA + A ++ GL+ A Y+ V FP
Sbjct: 310 LKSILCRTPGEF--YHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFP 367
Query: 387 GSSSWDVFAE-ILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440
+ F E ++ + + +P + F IRV + EAC R++ F
Sbjct: 368 EFENDVEFTERLVAEQSVHCLPATCF--EYPNFIRVVITVPEVMMLEACSRIQEF 420
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 118 ALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL-QMLLGSNVTVAVQDPSFPAYIDTSV 176
+LR +AD FY+ +E +E+ + G I L ++LL + P+F Y ++
Sbjct: 71 SLRKEVAD-FYQ---LEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 177 IVGQAGKF--LKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQ 234
I G + L + G++ +N E +T I++ C+PNNPTG+
Sbjct: 127 IEGAEVREIPLLQDGEHDLEGXLNAIDE-----------KTTIVWICNPNNPTGNYIELA 175
Query: 235 QLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVR 294
++ ++ ++ ++V D AY Y+T P P ++ + I +FSK G R
Sbjct: 176 DIQAFLDRVPSD-VLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASAR 233
Query: 295 LGWTVVPEEL 304
+G+ + +E+
Sbjct: 234 VGYGIADKEI 243
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 103/246 (41%), Gaps = 7/246 (2%)
Query: 64 EHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAI 123
E + D ++ LG G P + +++ AF + + +G+G AL + +
Sbjct: 15 EFTKLAADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKAL-SCL 73
Query: 124 ADKFYKDMGIEGDEIFISDGAQSDI-SRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAG 182
K Y+ +EI ++ GA + + +Q L+ V + P + Y + G
Sbjct: 74 YGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVP 133
Query: 183 KFLKETGKYRNIVYMNCRPENNFFP---DLSTTSRTDIIFFCSPNNPTGHAATWQQLKKL 239
F+ K + + + F P + +S+T I +P+NP G T Q+L+ +
Sbjct: 134 VFIPLRSKPTDGMKWTSS-DWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVI 192
Query: 240 VEFAKANGSIIVYDSAYAAYI-TDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298
+ + ++ + D Y + T + I +PG E I I S K TG +LGW+
Sbjct: 193 ADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWS 252
Query: 299 VVPEEL 304
+ P L
Sbjct: 253 IGPAHL 258
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 167/426 (39%), Gaps = 58/426 (13%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTT----QPIPDIITSAMAEHA 98
NV + + P ++ ++ ++ +P+ +I L IGD T P +T AM +
Sbjct: 2 NVRPSDMSNKTFNPIRAIVDNMKVKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKD-- 59
Query: 99 FALSTVKGYKGYGAEQGNMALRTAIADKFY-KDMGIEGDEIFISDGAQSDISR-LQMLLG 156
AL + K Y GY G ++ R +A ++ + +E ++ ++ G I L +L
Sbjct: 60 -ALDSGK-YNGYAPSIGYLSSREEVASYYHCPEAPLEAKDVILTSGCSQAIELCLAVLAN 117
Query: 157 SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTS--- 213
+ + P F Y + L E+ +Y N PE ++ DL
Sbjct: 118 PGQNILIPRPGFSLY-----------RTLAESMGIEVKLY-NLLPEKSWEIDLKQLESLI 165
Query: 214 --RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI 271
+T + +P+NP G + + L+K++ A+ I+ D Y + YE
Sbjct: 166 DEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVFSDCK---YEP 222
Query: 272 PGAREVAIEISSFSKFAG---FTGVRLGWTVVPE-------ELRYSNGYPVIKDFNRIVC 321
+ I S A G RLGW ++ + E+R +G ++K RI+
Sbjct: 223 MATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIR--DG--LVKLSQRIL- 277
Query: 322 TCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPY 380
G IVQ + L + + + + K NA + A ++ GL+ A Y
Sbjct: 278 ----GPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQPVRPSGAMY 333
Query: 381 VWV-----QFPGSSSWDVFAE-ILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEAC 434
+ V FP + F E ++ + + +P + F RV + EAC
Sbjct: 334 LMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATCF--EYPNFFRVVITVPEVMMLEAC 391
Query: 435 RRLKNF 440
R++ F
Sbjct: 392 SRIQEF 397
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 149/377 (39%), Gaps = 62/377 (16%)
Query: 90 ITSAMAEHAFALS---------TVKGYK-GYGAEQGNMALRTAIADKFYKDMGIEGDEIF 139
I+S E FALS ++G K YG +G+ A + +++ + G++ ++I
Sbjct: 29 ISSLTLEELFALSGTNPEDFYKKLQGTKLNYGWIEGSPAFKKSVSQLY---TGVKPEQIL 85
Query: 140 ISDGAQ-SDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMN 198
++GA +++ L L+ V P++ D +G +
Sbjct: 86 QTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGA------------EVDLWQ 133
Query: 199 CRPENNFFPDLSTTSR-----TDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYD 253
EN + PDL + T I + NNPTG L++LVE A G+ I+ D
Sbjct: 134 IEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEIASEVGAYILSD 193
Query: 254 SAYAAYITDPSPRSIYEIPGAREV---AIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY 310
Y ++ S ++P EV I ++S S G+R+GW ++
Sbjct: 194 EVYRSF-------SELDVPSIIEVYDKGIAVNSLSXTYSLPGIRIGWVAANHQVT----- 241
Query: 311 PVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGL 370
+++D+ C ++V LA +Q + + E I+D +
Sbjct: 242 DILRDYRDYTXICAGVFDDLVAQLALA-----HYQEILERNRHILEENLAILDQWIEEEP 296
Query: 371 KVNGGKNAPY------VWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF 424
V+ + A + V P D ++L++ +L +PG+ F G ++R+
Sbjct: 297 LVSYIRPAVVSTSFVKIAVDXPXE---DFCLQLLQEHGVLLVPGNRFERDG--YVRLGFA 351
Query: 425 GHREYISEACRRLKNFL 441
+E + + +L FL
Sbjct: 352 CEQETLIKGLEKLSQFL 368
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 7/246 (2%)
Query: 64 EHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAI 123
E + D ++ LG G P + +++ AF + + +G+G AL + +
Sbjct: 15 EFTKLAADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKAL-SCL 73
Query: 124 ADKFYKDMGIEGDEIFISDGAQSDI-SRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAG 182
K Y+ +EI ++ GA + + +Q L+ V + P + Y + G
Sbjct: 74 YGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVP 133
Query: 183 KFLKETGKYRNIVYMNCRPENNFFP---DLSTTSRTDIIFFCSPNNPTGHAATWQQLKKL 239
F+ K + + + F P + +S+T I +P+NP G T Q+L+ +
Sbjct: 134 VFIPLRSKPTDGMKWTSS-DWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVI 192
Query: 240 VEFAKANGSIIVYDSAYAAYI-TDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298
+ + ++ + D Y + T + I +PG E I I S TG +LGW+
Sbjct: 193 ADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWS 252
Query: 299 VVPEEL 304
+ P L
Sbjct: 253 IGPAHL 258
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 150/386 (38%), Gaps = 50/386 (12%)
Query: 95 AEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI--EGDEIFISDGAQSDISRLQ 152
A+ A+ + Y QG LR AIA G D+IF++DGA + +
Sbjct: 115 AKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMM 174
Query: 153 MLLGSNVT--VAVQDPSFPAYIDTSVIVGQA--GKFLKETGKYRNIVYMNCRPENNFFPD 208
LL N + V P +P Y + + G A +L E+ + + + + +
Sbjct: 175 QLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGW-GLETSDVKKQLEDARS 233
Query: 209 LSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA--YITDPSPR 266
R ++ +P NPTG + +V+F K G +++ D Y Y+ +
Sbjct: 234 RGINVRALVVI--NPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFH 291
Query: 267 SIYEIP---GAREVAIEISSFSK----FAGFTGVRLGWTVVPEELRYSNGY--PVIKDFN 317
S +I G E + + S+ + G G R G+ + G+ PV +
Sbjct: 292 SFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEI-------TGFSAPVREQIY 344
Query: 318 RI----VCTCFNG---ASNIVQAGGLACLSPDGFQALRT-VIDYYKENAKIIVDAFQSL- 368
+I +C+ G AS ++ + S ++A + ++ AK + AF L
Sbjct: 345 KIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLE 404
Query: 369 GLKVNGGKNAPYVWVQF-----------PGSSSWDVF--AEILEKTHILTIPGSGFGP-G 414
G+ N + A YV+ Q + + D F +LE T I+ +PGSGFG
Sbjct: 405 GITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVP 464
Query: 415 GNEHIRVSAFGHREYISEACRRLKNF 440
G H R + + I R F
Sbjct: 465 GTWHFRCTILPQEDKIPAVISRFTVF 490
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 97/255 (38%), Gaps = 23/255 (9%)
Query: 64 EHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAI 123
E ++ + ++ LG G P PD A A+S Y G L +
Sbjct: 20 EFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQH---AVSGDFMLNQYTKTFGYPPLTKIL 76
Query: 124 ADKFYKDMGIEGD---EIFISDGAQSDI-SRLQMLLGSNVTVAVQDPSFPAYIDTSVIVG 179
A F + +G E D + ++ G + + Q L+ V + +P F Y +++ G
Sbjct: 77 ASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAG 136
Query: 180 QAGKFLK---------ETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHA 230
F+ E G N F TSRT + +PNNP G
Sbjct: 137 GRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKF------TSRTKALVLNTPNNPLGKV 190
Query: 231 ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR-SIYEIPGAREVAIEISSFSKFAG 289
+ ++L+ + + + + + D Y + D SI +PG E + I S K
Sbjct: 191 FSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFS 250
Query: 290 FTGVRLGWTVVPEEL 304
TG ++GW + P+ +
Sbjct: 251 ATGWKVGWVLGPDHI 265
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 23/234 (9%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGA-- 274
+ C+P+NP G T +LKKL + + I+ D ++ I IP A
Sbjct: 167 LFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKH----IPMASI 222
Query: 275 ----REVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKD-FNRIVCTCFNGASN 329
+ I + +K G++ + V+P+E Y ++ D F RI N S
Sbjct: 223 SKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE----KDYKLLDDAFTRIDIKRNNCFSL 278
Query: 330 IVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL--GLKVNGGKNAPYVWVQFP- 386
+ +G L + ++Y + N + LKV + +WV F
Sbjct: 279 VATEASYN----NGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSA 334
Query: 387 -GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKN 439
G S ++ + +++K + G+ FG GG+ + R++ R + EA R+KN
Sbjct: 335 LGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKN 388
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 155/419 (36%), Gaps = 70/419 (16%)
Query: 51 SGYLFPEISMRESEHIRK----HPDARLIRLGIGDTT-QPIPDIITSAMAEHAFALSTVK 105
S Y F R S H K D +L+ I D + +P++ A H +A V
Sbjct: 6 SKYNFQTAPNRLSHHTYKWKETETDPQLLPAWIADMDFEVMPEV---KQAIHDYAEQLVY 62
Query: 106 GYKGYGAEQGNMALRTAIAD--KFYKDMGIEGDEIFISDGAQSDIS-RLQMLLGSNVTVA 162
GY Y +++ L A+ D K + ++I +G IS +Q V
Sbjct: 63 GYT-YASDE----LLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVL 117
Query: 163 VQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDII---- 218
+ P +P + + + R +V + + EN F DI+
Sbjct: 118 INSPVYPPFARSVRLNN------------RKLVSNSLKEENGLFQIDFEQLENDIVENDV 165
Query: 219 ---FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI--PG 273
C+P+NP G + L+++ + + I+V D + + P
Sbjct: 166 KLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPD 225
Query: 274 AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQA 333
++ A+ +SS +K G + N Y +I+ N +C F +
Sbjct: 226 FKDFALVLSSATKTFNIAGTK-------------NSYAIIE--NPTLCAQFKHQQLVNNH 270
Query: 334 GGLACLSPDGFQALRTVIDYYK-----------ENAKIIVDAF--QSLGLKVNGGKNAPY 380
++ L G+ A T Y K EN + V+ F ++ LKV +
Sbjct: 271 HEVSSL---GYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYL 327
Query: 381 VWVQFP--GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRL 437
+W+ F G + +F + ++ ++ GS +G G H R++ + + E C+R+
Sbjct: 328 IWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRI 386
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 164/429 (38%), Gaps = 51/429 (11%)
Query: 41 SRNVNMESLQSGYLFPEISMRESEHIRKHPDAR-LIRLGIGDTTQPIPDIITSAMAEHAF 99
S +V+M S +G +F I S++ + P + +I+L +GD T + ++A +
Sbjct: 3 SWDVSM-SNHAGLVFNPIRTV-SDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLK 60
Query: 100 ALSTVKGYKGYGAEQGNMALRTAIADKF---------YKDMGIEGDEIFISDGAQSDISR 150
+ GY G+ R A+A + K ++ + + S G+ +
Sbjct: 61 EAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMA 120
Query: 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS 210
+ + + V P FP Y G F NCRPEN++ DL
Sbjct: 121 ITAICDAGDYALVPQPGFPHYETVCKAYGIGMHF------------YNCRPENDWEADLD 168
Query: 211 TTSR-----TDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI-TDPS 264
R T ++ +P+NP G + + ++ +V A+ + D YA +
Sbjct: 169 EIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKD 228
Query: 265 PRSIYEIPGAREVAIEISSFSKFAG---FTGVRLGWTVVPEELRYSNGYPVIKDFNRI-- 319
P + + E + A G RLGW + + + NG ++ R+
Sbjct: 229 PNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDP--HGNGPSFLEGLKRVGM 286
Query: 320 -VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAF-QSLGLKVNGGKN 377
VC G +VQA L + L ++ +E+A + + + +GL +
Sbjct: 287 LVC----GPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRG 342
Query: 378 APYVWVQFPGSSSWDVFAEI------LEKTHILTIPGSGFGPGGNEHIRVSAFGHREYIS 431
A Y+ + D+ ++ LE+ ++ +PG+ F G R++ E
Sbjct: 343 AMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPG--FTRLTTTRPVEVYR 400
Query: 432 EACRRLKNF 440
EA R+K F
Sbjct: 401 EAVERIKAF 409
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 23/255 (9%)
Query: 64 EHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAI 123
E ++ + ++ LG G P PD A A+S Y G L +
Sbjct: 20 EFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQH---AVSGDFMLNQYTKTFGYPPLTKIL 76
Query: 124 ADKFYKDMGIEGD---EIFISDGAQSDI-SRLQMLLGSNVTVAVQDPSFPAYIDTSVIVG 179
A F + +G E D + ++ G + + Q L+ V + +P F Y +++ G
Sbjct: 77 ASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAG 136
Query: 180 QAGKFLK---------ETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHA 230
F+ E G N F TSRT + +PNNP G
Sbjct: 137 GRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKF------TSRTKALVLNTPNNPLGKV 190
Query: 231 ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR-SIYEIPGAREVAIEISSFSKFAG 289
+ ++L+ + + + + + D Y + D SI +PG E + I S
Sbjct: 191 FSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFS 250
Query: 290 FTGVRLGWTVVPEEL 304
TG ++GW + P+ +
Sbjct: 251 ATGWKVGWVLGPDHI 265
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 23/255 (9%)
Query: 64 EHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAI 123
E ++ + ++ LG G P PD A A+S Y G L +
Sbjct: 20 EFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQH---AVSGDFMLNQYTKTFGYPPLTKIL 76
Query: 124 ADKFYKDMGIEGD---EIFISDGAQSDI-SRLQMLLGSNVTVAVQDPSFPAYIDTSVIVG 179
A F + +G E D + ++ G + + Q L+ V + +P F Y +++ G
Sbjct: 77 ASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAG 136
Query: 180 QAGKFLK---------ETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHA 230
F+ E G N F TSRT + +PNNP G
Sbjct: 137 GRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKF------TSRTKALVLNTPNNPLGKV 190
Query: 231 ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR-SIYEIPGAREVAIEISSFSKFAG 289
+ ++L+ + + + + + D Y + D SI +PG E + I S
Sbjct: 191 FSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFS 250
Query: 290 FTGVRLGWTVVPEEL 304
TG ++GW + P+ +
Sbjct: 251 ATGWKVGWVLGPDHI 265
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 149/415 (35%), Gaps = 66/415 (15%)
Query: 54 LFPEISMRESEHIRK---HPDARLIRLGIGDTTQPIPDIITSAMA---EHAFALSTVKGY 107
LF + R H K + + LI I D +P I +A+ EH
Sbjct: 3 LFHKTVNRRGTHSIKWDTYKNEELIHAWIADXDFEVPQPIQTALKKRIEHPIF------- 55
Query: 108 KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDIS-RLQMLLGSNVTVAVQDP 166
GY N+ K + I+ + I S G +S +Q N +V VQ P
Sbjct: 56 -GYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPP 114
Query: 167 SFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFP-DLSTTSR-----TDIIFF 220
+P + F T R + + +N+ + D + +
Sbjct: 115 IYPPF------------FEXVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLXLL 162
Query: 221 CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI----TDPSPRSIYEIPGARE 276
CSP+NP G ++L KL I+V D ++ I T S+ E AR
Sbjct: 163 CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAART 222
Query: 277 VAIEISSFSKFAGFTGVRLGWTVVPEE--------LRYSNGYPVIKDFNRIVCTCFNGAS 328
+ S + G++ ++P E ++Y G+ + F A
Sbjct: 223 ITCXAPSXT--FNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIF----------AY 270
Query: 329 NIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL--GLKVNGGKNAPYVWVQFP 386
Q+ C D +R Y ++NAK + + L V + + +W+
Sbjct: 271 TAXQSAYTEC--NDWLNEIRF---YIEDNAKFACEYIKDHIPTLSVXKPEGSFLLWIDCS 325
Query: 387 GSS-SWDVFAEILE-KTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKN 439
+ S D ++LE K I+ PG +G GG EHI ++ R + E RL++
Sbjct: 326 ALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRH 380
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY-EIPGAR 275
I++ +PNNPTG ++ + AN IV D AYA ++ DP RSI I
Sbjct: 144 IVYLVNPNNPTGTITPADVIEPWIASKPANTXFIV-DEAYAEFVNDPRFRSISPXITQGA 202
Query: 276 EVAIEISSFSKFAGFTGVRLGWTV 299
E I + +FSK G R+G+ V
Sbjct: 203 ENIILLKTFSKIHAXAGXRVGYAV 226
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 19/221 (8%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRS-IYEIPGAR 275
+++ CSPNNPTG Q + L+E + +I+V D AY + S + E P
Sbjct: 149 VVYVCSPNNPTGQLINPQDFRTLLELTRGK-AIVVADEAYIEFCPQASLAGWLAEYP--- 204
Query: 276 EVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGG 335
+AI + + SK G+R G+T+ EE VI +++ + ++ +
Sbjct: 205 HLAI-LRTLSKAFALAGLRCGFTLANEE--------VINLLMKVIAP-YPLSTPVADIAA 254
Query: 336 LACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQFPGSSSWDVF 394
A LSP G A+R + + ++ A + + ++ Y+ +F SS+ VF
Sbjct: 255 QA-LSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSA--VF 311
Query: 395 AEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACR 435
+ ++ IL G I V + + +A R
Sbjct: 312 KSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALR 352
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 129/325 (39%), Gaps = 46/325 (14%)
Query: 110 YGAEQGNMALRTAIA---DKFYKDMGIEGDEIFISDGAQSDISRL-QMLLGSNVTVAVQD 165
Y +G+ L+ I ++ Y G++ D + + G+Q + + ++ L + D
Sbjct: 81 YSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140
Query: 166 PS-------FPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDII 218
P+ F Y+ V+V L++ G N++ F + I
Sbjct: 141 PAYLGAINAFRQYLANFVVVP-----LEDDGXDLNVLERKLSE----FDKNGKIKQVKFI 191
Query: 219 FFCSP-NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAY-----ITDPSPRSIYEIP 272
+ S +NP G + ++ K LVE A+ IV D Y A DP I++I
Sbjct: 192 YVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDP----IFKIG 247
Query: 273 GAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQ 332
G V + +++FSK G+R+G +E I + C ++ +
Sbjct: 248 GPERVVL-LNTFSKVLA-PGLRIGXVAGSKEFIRK-----IVQAKQSADLCSPAITHRLA 300
Query: 333 AGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-----GLKVNGGKNAPYVWVQFP- 386
A L D + L+ I+ Y+ + ++A + G+K + ++W+ P
Sbjct: 301 ARYLERY--DLLEQLKPTIELYRRKRTVXLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE 358
Query: 387 GSSSWDVFAEILEKTHILTIPGSGF 411
G +W+ F E ++ + +PG F
Sbjct: 359 GFDTWEXF-EYAKRKKVFYVPGRVF 382
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 23/264 (8%)
Query: 133 IEGDEIFISDGAQSDI-SRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKY 191
++ + + ++ GA I S L LL + V V +P F YI + G ++
Sbjct: 116 LKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVP-INPP 174
Query: 192 RNIVYMNCRPENNFFP----DLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANG 247
+ + N R E + + TS+T + +P+NP G T ++L L +
Sbjct: 175 KELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHN 234
Query: 248 SIIVYDSAYA-AYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW--TVVPEEL 304
+I+ D Y Y TD R P ++ + + S TG R+GW ++ E L
Sbjct: 235 VVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLSLNAELL 294
Query: 305 RYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLA---CLSPDGFQALRTVIDYYKENAKII 361
Y+ K RI CF S + +A + L F+ +R Y KI
Sbjct: 295 SYA-----AKAHTRI---CFASPSPLQEACANSINDALKIGYFEKMR---QEYINKFKIF 343
Query: 362 VDAFQSLGLKVNGGKNAPYVWVQF 385
F LGL + +V V F
Sbjct: 344 TSIFDELGLPYTAPEGTYFVLVDF 367
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRS-IYEIPGAR 275
+++ CSPNNPTG Q + L+E + +I+V D AY + S + E P
Sbjct: 149 VVYVCSPNNPTGQLINPQDFRTLLELTRGK-AIVVADEAYIEFCPQASLAGWLAEYP--- 204
Query: 276 EVAIEISSFSKFAGFTGVRLGWTVVPEEL 304
+AI + + SK G+R G+T+ EE+
Sbjct: 205 HLAI-LRTLSKAFALAGLRCGFTLANEEV 232
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275
DI+F +PNNPTG + +++++ A I++ D AYA + PS ++ E +
Sbjct: 166 DIVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAEFSPSPSATTLLEKYPTK 222
Query: 276 EVAIEISSFSKFAGFTGVRLGWTV 299
V + SK F G RLG+ V
Sbjct: 223 LVVSR--TMSKAFDFAGGRLGYFV 244
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275
DI+F +PNNPTG + +++++ A I++ D AYA + PS ++ E +
Sbjct: 163 DIVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAEFSPSPSATTLLEKYPTK 219
Query: 276 EVAIEISSFSKFAGFTGVRLGWTV 299
V + SK F G RLG+ V
Sbjct: 220 LVVSR--TMSKAFDFAGGRLGYFV 241
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR-SIYEIP 272
+T +I +P+NP G +L+ + K + V D Y + +P I +P
Sbjct: 182 KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP 241
Query: 273 GAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304
G E I I S K TG ++GW PE L
Sbjct: 242 GMWERTITIGSAGKTFSLTGWKIGWAYGPEAL 273
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYE-IPGA 274
DI+F +PNNPTG + +++++ A I++ D AYA + PS ++ E P
Sbjct: 166 DIVFVTTPNNPTGDVTSLDDVERIINVAPG---IVIVDEAYAEFSPSPSATTLLEKYPTK 222
Query: 275 REVAIEISSFSKFAGFTGVRLGWTV 299
V+ +S FAG RLG+ V
Sbjct: 223 LVVSRTMSXAFDFAGG---RLGYFV 244
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 125/342 (36%), Gaps = 44/342 (12%)
Query: 86 IPDIITSAMAEHA-FALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD-EIFISDG 143
I DI+ M ++A AL YG +G LR + K GI D +I I+ G
Sbjct: 96 IRDILVEIMEKYADKALQ-------YGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSG 148
Query: 144 AQSDISRL-QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVY----MN 198
+Q + + ++ L V V+ P++ A + QA F + +Y I M
Sbjct: 149 SQQALDLIGRVFLNPGDIVVVEAPTYLAAL-------QAFNFYEP--QYIQIPLDDEGMK 199
Query: 199 CRPENNFFPDLSTTSRTDIIFFCSP--NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAY 256
+L + + + + P NP G + K L+E A I+V D Y
Sbjct: 200 VEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPY 259
Query: 257 AAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV-VPEELRYSNGYPVIKD 315
+P + I + +FSK G R+GW V P +R I
Sbjct: 260 GELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKME----IAK 314
Query: 316 FNRIVCTCFNG---ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL---G 369
+ +CT G A V G L P+ + +YK +++A + G
Sbjct: 315 QSTDLCTNVFGQVVAWRYVDGGYLEKHIPE-------IRKFYKPRRDAMLEALEEFMPEG 367
Query: 370 LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGF 411
+K + ++WV P E K + +PG F
Sbjct: 368 VKWTKPEGGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEAF 409
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 209 LSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSI 268
+S D + +PNNP G ++ +++ A+ I+ D A+ + DPS +
Sbjct: 139 ISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFV 198
Query: 269 YEIPGAREVAIEISSFSKFAGFTGVRLGWTV 299
EI + I I + +KF G+R G+ +
Sbjct: 199 GEIKNYSCLFI-IRAMTKFFAMPGIRFGYGI 228
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 125/342 (36%), Gaps = 44/342 (12%)
Query: 86 IPDIITSAMAEHA-FALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD-EIFISDG 143
I DI+ M ++A AL YG +G LR + K GI D +I I+ G
Sbjct: 51 IRDILVEIMEKYADKALQ-------YGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSG 103
Query: 144 AQSDISRL-QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVY----MN 198
+Q + + ++ L V V+ P++ A + QA F + +Y I M
Sbjct: 104 SQQALDLIGRVFLNPGDIVVVEAPTYLAAL-------QAFNFYEP--QYIQIPLDDEGMK 154
Query: 199 CRPENNFFPDLSTTSRTDIIFFCSP--NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAY 256
+L + + + + P NP G + K L+E A I+V D Y
Sbjct: 155 VEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPY 214
Query: 257 AAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV-VPEELRYSNGYPVIKD 315
+P + I + +FSK G R+GW V P +R I
Sbjct: 215 GELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKME----IAK 269
Query: 316 FNRIVCTCFNG---ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL---G 369
+ +CT G A V G L P+ + +YK +++A + G
Sbjct: 270 QSTDLCTNVFGQVVAWRYVDGGYLEKHIPE-------IRKFYKPRRDAMLEALEEFMPEG 322
Query: 370 LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGF 411
+K + ++WV P E K + +PG F
Sbjct: 323 VKWTKPEGGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEAF 364
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR-SIYEIP 272
+T +I +P+NP G +L+ + K + V D Y + +P I +P
Sbjct: 182 KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP 241
Query: 273 GAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304
G E I I S TG ++GW PE L
Sbjct: 242 GMWERTITIGSAGXTFSLTGWKIGWAYGPEAL 273
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 138/359 (38%), Gaps = 89/359 (24%)
Query: 150 RLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF-FPD 208
+L LL + VA+ P F YI+ + A L+E V +N P N+ +PD
Sbjct: 186 KLNGLLKAGDKVAIGMPVFTPYIEIPELAQYA---LEE-------VAINADPSLNWQYPD 235
Query: 209 LSTTSRTD---IIFFC-SPNNPTGHAATWQQLKKLVEFAKAN--GSIIVYDSAYAAYITD 262
D IFFC +P+NP + L+++ + +I+ D Y + D
Sbjct: 236 SELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD 295
Query: 263 PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV-------------------VPEE 303
+S++ I E + + SFSK+ G TG RLG V +
Sbjct: 296 F--QSLFAI--CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALD 351
Query: 304 LRYSNGYPVIKDF---NRIVCTCFNGASNIVQAGGLACLSPDGFQ-------ALRTVIDY 353
RY + P ++ +R+V A N GL+ +P Q AL D
Sbjct: 352 HRYRSLLPDVRSLKFIDRLVADSRAVALN--HTAGLS--TPQQVQMALFSLFALMDEADE 407
Query: 354 YKENAKIIV-----DAFQSLGLKVNGGKNAP--YVWVQFPG-----------------SS 389
YK K ++ ++ LG+ +NA Y + SS
Sbjct: 408 YKHTLKQLIRRRETTLYRELGMPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSS 467
Query: 390 SWDVFAEILEKTHILTIPGSGFG---PGGNEHIRVSAFGHREY----ISEACRRLKNFL 441
+ D+ I ++T I+ +PG+GFG P G R S EY I A R++ + L
Sbjct: 468 TGDMLFRIADETGIVLLPGAGFGSNRPSG----RASLANLNEYEYAAIGRALRKMADEL 522
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 20/230 (8%)
Query: 213 SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIP 272
RT I +P NPTG + + LVE A+ +G ++ D Y+ + S I
Sbjct: 173 ERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIE 232
Query: 273 GAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQ 332
+ V I+ S KF+ G R+G + E S+ + + R+ ++
Sbjct: 233 SDKVVVIDSVS-XKFSA-CGARVGCLITRNEELISHAXKLAQ--GRLAPPLLEQIGSV-- 286
Query: 333 AGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLK-VNGGKNAPYVWVQFPGSSS- 390
GL L F +R + Y+E + ++ + GLK A Y+ + P +
Sbjct: 287 --GLLNLDDSFFDFVR---ETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAE 341
Query: 391 ----WDV--FAEILEKTHILTIPGSGFGPG-GNEHIRVSAFGHREYISEA 433
W + F E T + + G PG G + IR++ ++ +S A
Sbjct: 342 EFARWXLTDFNXDGETTXVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRA 391
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 210 STTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY 269
+ SR D + +P+NPTG A + +L +L + A G +++ D Y Y S R+
Sbjct: 131 AQVSRDDCVVLANPSNPTGQALSAGELDQLRQRA---GKLLI-DETYVDY---SSFRARG 183
Query: 270 EIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304
G E+ SFSK G G+RLG P EL
Sbjct: 184 LAYGENELVFR--SFSKSYGLAGLRLGALFGPSEL 216
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 137/359 (38%), Gaps = 89/359 (24%)
Query: 150 RLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF-FPD 208
+L LL + VA+ P F YI+ + A L+E V +N P N+ +PD
Sbjct: 186 KLNGLLKAGDKVAIGMPVFTPYIEIPELAQYA---LEE-------VAINADPSLNWQYPD 235
Query: 209 LSTTSRTD---IIFFC-SPNNPTGHAATWQQLKKLVEFAKAN--GSIIVYDSAYAAYITD 262
D IFFC +P+NP + L+++ + +I+ D Y + D
Sbjct: 236 SELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD 295
Query: 263 PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV-------------------VPEE 303
+S++ I E + + SFSK+ G TG RLG V +
Sbjct: 296 F--QSLFAI--CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALD 351
Query: 304 LRYSNGYPVIKDF---NRIVCTCFNGASNIVQAGGLACLSPDGFQ-------ALRTVIDY 353
RY + P ++ +R+V A N GL+ +P Q AL D
Sbjct: 352 HRYRSLLPDVRSLKFIDRLVADSRAVALN--HTAGLS--TPQQVQMALFSLFALMDEADE 407
Query: 354 YKENAKIIV-----DAFQSLGLKVNGGKNAP--YVWVQFPG-----------------SS 389
YK K ++ ++ LG+ +NA Y + SS
Sbjct: 408 YKHTLKQLIRRRETTLYRELGMPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSS 467
Query: 390 SWDVFAEILEKTHILTIPGSGFG---PGGNEHIRVSAFGHREY----ISEACRRLKNFL 441
+ D+ I ++T I+ +PG GFG P G R S EY I A R++ + L
Sbjct: 468 TGDMLFRIADETGIVLLPGRGFGSNRPSG----RASLANLNEYEYAAIGRALRKMADEL 522
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 210 STTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY 269
+ T D +F C+PNNPTG L+ + + K+ ++ D A+ +I P
Sbjct: 142 ALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI----PHETG 197
Query: 270 EIPGAREVA--IEISSFSKFAGFTGVRLGWTV 299
IP ++ + S +KF G+RLG+ V
Sbjct: 198 FIPALKDNPHIWVLRSLTKFYAIPGLRLGYLV 229
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275
D++F +PNNPTGH ++++++++ G+ + D AY + S +
Sbjct: 152 DVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAYYEF----HGESYVDFLKKY 203
Query: 276 EVAIEISSFSKFAGFTGVRLGWTVVPEEL 304
E I +FSK R+G+ V E+
Sbjct: 204 ENLAVIRTFSKAFSLAAQRVGYVVASEKF 232
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275
D++F +PNNPTGH ++++++++ G+ + D AY + S +
Sbjct: 140 DVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAYYEF----HGESYVDFLKKY 191
Query: 276 EVAIEISSFSKFAGFTGVRLGWTVVPEEL 304
E I +FSK R+G+ V E+
Sbjct: 192 ENLAVIRTFSKAFSLAAQRVGYVVASEKF 220
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 121/293 (41%), Gaps = 36/293 (12%)
Query: 161 VAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF--FPDLSTTSRTDII 218
+ VQ+P + + SVI G + + +++Y N + N+ + T
Sbjct: 112 ILVQEPVYNXFY--SVIEGNGRRVIS-----SDLIYENSKYSVNWADLEEKLATPSVRXX 164
Query: 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI-TDPSPRSIYEIP-GARE 276
FC+P+NP G+A + +++K++ E + +++ D + + TD + + A+
Sbjct: 165 VFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKN 224
Query: 277 VAIEISSFSKFAGFTGVRLGWTVVPE-ELRYSNGYPVIKDFNRIVCTCFN---GASNIVQ 332
+ + S S + ++P +LR R + F G N++
Sbjct: 225 WVVSLISPSXTFNLAALHAACAIIPNPDLR-----------ARAEESFFLAGIGEPNLLA 273
Query: 333 AGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGK----NAPYV-WVQFP- 386
+G LR + ++N A + L +V K NA Y+ WV
Sbjct: 274 IPAAIAAYEEGHDWLRELKQVLRDN---FAYAREFLAKEVPEVKVLDSNASYLAWVDISA 330
Query: 387 -GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLK 438
G ++ D + EKT ++ G+G+ G+E +R++ +E + + +RLK
Sbjct: 331 LGXNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGXQRLK 383
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275
D++F +PNNPTGH ++++++++ G+ + D AY + + S +
Sbjct: 140 DVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAYYEFHGE----SYVDFLKKY 191
Query: 276 EVAIEISSFSKFAGFTGVRLGWTVVPEEL 304
E I +FSK R+G+ V E+
Sbjct: 192 ENLAVIRTFSKAFSLAAQRVGYVVASEKF 220
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 14/227 (6%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAY-ITDPSPRSIYEIPGA- 274
I CSP+NP G L K+ E K +G I+V D + + + S+ + +
Sbjct: 197 IYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASY 256
Query: 275 REVAIEISSFSKFAGFTGVRLGWTVVPEE-LRYSNGYPVIKDFNRIVCTCFNGASNIVQA 333
++ I +SS +K G + + ++ E LR Y + + V T A+
Sbjct: 257 KDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQ 316
Query: 334 GGLACLSPDGFQALRTVIDYYKENAKIIVDAFQS-LGLKVNGGKNAPYVWVQFPGSS-SW 391
G L + L+TVI+ N K+++ ++ +KV + VW+ F + +
Sbjct: 317 YGKPWL-----EELKTVIE---GNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQ 368
Query: 392 DVFAEILE-KTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRL 437
+E L+ + ++ G+ FG G R++ + + EA R+
Sbjct: 369 PQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRI 415
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 27/187 (14%)
Query: 119 LRTAIADKFYKDMGIEGDEIFISDGAQSDISRL-QMLLGSNVTVAVQDPSFPAYIDTSVI 177
LR +A K ++ + I +++G + ++ Q GS +A+ PSF Y D
Sbjct: 55 LRQXLA----KRNSVDNNAILVTNGPTAAFYQIAQAFRGSRSLIAI--PSFAEYEDAC-- 106
Query: 178 VGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLK 237
R + C +N + S D + C+PNNP G ++
Sbjct: 107 --------------RXYEHEVCFYPSNEDIGEADFSNXDFCWLCNPNNPDGRLLQRTEIL 152
Query: 238 KLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297
+L+ + V D +Y ++ T+ R +I G R+ + + SFS G G+R+G+
Sbjct: 153 RLLN--DHPDTTFVLDQSYVSFTTEEVIRPA-DIKG-RKNLVXVYSFSHAYGIPGLRIGY 208
Query: 298 TVVPEEL 304
V ++
Sbjct: 209 IVANKDF 215
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 210 STTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS---PR 266
+ T RT + SP+NPTG + +L + E A A +++ D Y + D + P
Sbjct: 156 AVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPL 215
Query: 267 SIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304
+ ++ G E I ISS + TG ++GW P EL
Sbjct: 216 AGFD--GMAERTITISSAAXMFNCTGWKIGWACGPAEL 251
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 148/370 (40%), Gaps = 42/370 (11%)
Query: 60 MRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKG--YGAEQGNM 117
M+++ ++K +LI L GD P P++I A+ K K Y G
Sbjct: 23 MKKASELQKK-GVKLISLAAGD---PDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIP 78
Query: 118 ALRTAIAD--KFYKDMGIEGDEIFISDGAQSDISRL-QMLLGSNVTVAVQDPSFPAYIDT 174
LR +A K Y + + + I I+ G + L ++L+ V ++PS YI+T
Sbjct: 79 ELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPS---YINT 135
Query: 175 SVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSP--NNPTGHAAT 232
+ Q G ++ + + ++ E +L + + + P NP G +
Sbjct: 136 LLAFEQLGAKIEGVPVDNDGMRVDLLEEK--IKELKAKGQKVKLIYTIPTGQNPMGVTMS 193
Query: 233 WQQLKKLVEFAKANGSIIVYDSAYAAYI---TDPSPRSIYEIPGAREVAIEISSFSKFAG 289
++ K L+E A +I+ D+AY D P + G VA + SK G
Sbjct: 194 MERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVA---GTLSKVLG 250
Query: 290 FTGVRLGWTVVPEELRYS---NGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQA 346
TG R+GW + E+ P+ DF C A I Q L L F+
Sbjct: 251 -TGFRIGWIIAEGEILKKVLMQKQPI--DF----C-----APAISQYIALEYLKRGYFEK 298
Query: 347 --LRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQF--PGSSSWDVFA-EILEKT 401
L + YKE I++ A ++ K ++V F P + FA E++E+
Sbjct: 299 YHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGISFANELMERE 358
Query: 402 HILTIPGSGF 411
++ +PG F
Sbjct: 359 GVVVVPGKPF 368
>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
pdb|3MEB|B Chain B, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
Length = 448
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 210 STTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY 269
S ++ +F +NP+G T Q K+L+ K I +DSAY + T +
Sbjct: 198 SAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAF 257
Query: 270 EIPGAREVAIEI---SSFSKFAGFTGVRLG 296
+ + +E+ SFSK G G R+G
Sbjct: 258 AVRMFVDAGVEVLVAQSFSKNFGLYGERIG 287
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 139/356 (39%), Gaps = 91/356 (25%)
Query: 154 LLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF-FPDLSTT 212
LL + VA+ P F YI+ + A L+E V +N P N+ +PD
Sbjct: 190 LLKAGDKVAIGMPVFTPYIEIPELAQYA---LEE-------VAINADPALNWQYPDSELD 239
Query: 213 SRTD---IIFFC-SPNNPTG---HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSP 265
D IFFC +P+NP + ++++K+V + + +I+ D Y +
Sbjct: 240 KLKDPAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPD-LMILTDDVYGTFAD--GF 296
Query: 266 RSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV-------------VPE------ELRY 306
+S++ I A + + SFSK+ G TG RLG +PE + RY
Sbjct: 297 QSLFAICPAN--TLLVYSFSKYFGATGWRLGVVAAHKENIFDLALGRLPESEKTALDDRY 354
Query: 307 SNGYPVIKD---FNRIVCTCFNGASNIVQAGGLACLSPDGFQ-------ALRTVIDYYKE 356
+ P ++ +R+V A N GL+ +P Q AL D YK
Sbjct: 355 RSLLPDVRSLKFLDRLVADSRAVALN--HTAGLS--TPQQVQMTLFSLFALMDESDQYKH 410
Query: 357 NAKIIV-----DAFQSLGLKVNGGKNAP--YVWVQFPG-----------------SSSWD 392
K ++ ++ LG +NA Y + SS+ D
Sbjct: 411 TLKQLIRRREATLYRELGTPPQRDENAVDYYTLIDLQDVTSKLYGEAFSKWAVKQSSTGD 470
Query: 393 VFAEILEKTHILTIPGSGFG---PGGNEHIRVSAFGHREY----ISEACRRLKNFL 441
+ I ++T I+ +PG GFG P G R S EY I A R++ + L
Sbjct: 471 MLFRIADETGIVLLPGRGFGSDRPSG----RASLANLNEYEYAAIGRALRQMADEL 522
>pdb|2HOR|A Chain A, Crystal Structure Of Alliinase From Garlic- Apo Form
pdb|2HOX|A Chain A, Alliinase From Allium Sativum (Garlic)
pdb|2HOX|B Chain B, Alliinase From Allium Sativum (Garlic)
pdb|2HOX|C Chain C, Alliinase From Allium Sativum (Garlic)
pdb|2HOX|D Chain D, Alliinase From Allium Sativum (Garlic)
Length = 427
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 17/87 (19%)
Query: 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEI 281
SPNNP G L+ A G +YD Y Y +P I + I +
Sbjct: 204 SPNNPEG----------LLRHAVIKGCKSIYDMVY--YWPHYTP-----IKYKADEDILL 246
Query: 282 SSFSKFAGFTGVRLGWTVVPEELRYSN 308
+ SKF G +G R GW ++ +E Y+N
Sbjct: 247 FTMSKFTGHSGSRFGWALIKDESVYNN 273
>pdb|1LK9|A Chain A, The Three-Dimensional Structure Of Alliinase From Garlic
pdb|1LK9|B Chain B, The Three-Dimensional Structure Of Alliinase From Garlic
Length = 448
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 17/87 (19%)
Query: 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEI 281
SPNNP G L+ A G +YD Y Y +P I + I +
Sbjct: 204 SPNNPEG----------LLRHAVIKGCKSIYDMVY--YWPHYTP-----IKYKADEDILL 246
Query: 282 SSFSKFAGFTGVRLGWTVVPEELRYSN 308
+ SKF G +G R GW ++ +E Y+N
Sbjct: 247 FTMSKFTGHSGSRFGWALIKDESVYNN 273
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 82/215 (38%), Gaps = 28/215 (13%)
Query: 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAY-ITDPSPRSIYEIP 272
R + +P+NP G T +L L+ F + G ++ D Y+ + PS S+ E+
Sbjct: 191 RVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVL 250
Query: 273 GAR------EVAIEIS---SFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTC 323
R EV + S SK G G R+G YSN V+ ++ +
Sbjct: 251 KDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAI-------YSNDDMVVAAATKM--SS 301
Query: 324 FNGASNIVQAGGLACLSPDGFQALRTVIDY--YKENAKIIVDAFQSLGLKVNGGKNAPYV 381
F S+ Q A LS ++ K+ K +V Q G+ G +
Sbjct: 302 FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFC 361
Query: 382 WVQFPG-------SSSWDVFAEILEKTHILTIPGS 409
WV + +++ +I+ + H+ PGS
Sbjct: 362 WVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGS 396
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 206 FPDLSTTSRTDI--IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263
F L T + +I IF C PNNP G + + ++ + ++V D+AY + +
Sbjct: 143 FKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNED-CLVVIDAAYNEFASFK 201
Query: 264 SPRSIY---EIPGAREVAIEISSFSKFAGFTGVRLGWTV 299
+ E+ + + + +FS G G+R+G+ +
Sbjct: 202 DSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGI 240
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 82/215 (38%), Gaps = 28/215 (13%)
Query: 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAY-ITDPSPRSIYEIP 272
R + +P+NP G T +L L+ F + G ++ D Y+ + PS S+ E+
Sbjct: 189 RVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVL 248
Query: 273 GAR------EVAIEIS---SFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTC 323
R EV + S SK G G R+G YSN V+ ++ +
Sbjct: 249 KDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAI-------YSNDDMVVAAATKM--SS 299
Query: 324 FNGASNIVQAGGLACLSPDGFQALRTVIDY--YKENAKIIVDAFQSLGLKVNGGKNAPYV 381
F S+ Q A LS ++ K+ K +V Q G+ G +
Sbjct: 300 FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFC 359
Query: 382 WVQFPG-------SSSWDVFAEILEKTHILTIPGS 409
WV + +++ +I+ + H+ PGS
Sbjct: 360 WVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGS 394
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 82/215 (38%), Gaps = 28/215 (13%)
Query: 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAY-ITDPSPRSIYEIP 272
R + +P+NP G T +L L+ F + G ++ D Y+ + PS S+ E+
Sbjct: 191 RVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVL 250
Query: 273 GAR------EVAIEIS---SFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTC 323
R EV + S SK G G R+G YSN V+ ++ +
Sbjct: 251 KDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAI-------YSNDDMVVAAATKM--SS 301
Query: 324 FNGASNIVQAGGLACLSPDGFQALRTVIDY--YKENAKIIVDAFQSLGLKVNGGKNAPYV 381
F S+ Q A LS ++ K+ K +V Q G+ G +
Sbjct: 302 FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFC 361
Query: 382 WVQFPG-------SSSWDVFAEILEKTHILTIPGS 409
WV + +++ +I+ + H+ PGS
Sbjct: 362 WVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGS 396
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 75/217 (34%), Gaps = 38/217 (17%)
Query: 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD-PSPRSIYEIPGARE 276
+ +P+NP G LK ++ F + +V D YAA + D P SI EI +E
Sbjct: 192 LILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQE 251
Query: 277 VAIE-------ISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTC------ 323
+ + S SK G G R+G +I FN V C
Sbjct: 252 MTYCNKDLVHIVYSLSKDMGLPGFRVG---------------IIYSFNDDVVNCARKMSS 296
Query: 324 FNGASNIVQAGGLACLSPDGF--QALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYV 381
F S Q A LS + F LR + K + + +G+K +
Sbjct: 297 FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFC 356
Query: 382 WVQF-------PGSSSWDVFAEILEKTHILTIPGSGF 411
W+ S ++ I+ + PGS F
Sbjct: 357 WMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSF 393
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 144/381 (37%), Gaps = 60/381 (15%)
Query: 83 TQPIPDIITSAMAEHA-FALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIF 139
+ I I + EHA AL YG +G LR A+A K D+ + EI
Sbjct: 58 VETIKKIAVEVLEEHADKALQ-------YGTTKGFTPLRLALARWMEKRYDIPMSKVEIM 110
Query: 140 ISDGAQSDISRL-QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKF---------LKETG 189
G+Q + + ++ L + V+ P++ A I QA K+ L + G
Sbjct: 111 TVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAI-------QAFKYYDPEFISIPLDDKG 163
Query: 190 KYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSP-NNPTGHAATWQQLKKLVEFAKANGS 248
+++ R I++ S NP G + + KKL+E A
Sbjct: 164 MRVDLLEEKLEELRK------QGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDF 217
Query: 249 IIVYDSAYAA--YITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV-PEELR 305
+IV D Y+ Y +P+P + R I + +FSK G R+GW P +R
Sbjct: 218 LIVEDGPYSELRYSGEPTPPIKHFDDYGR--VIYLGTFSKILA-PGFRIGWVAAHPHLIR 274
Query: 306 YSNGYPVIKDFNRIVCTCFNG---ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIV 362
I + +CT G A V+ G L P +I++YK ++
Sbjct: 275 KME----IAKQSIDLCTNTFGQAIAWKYVENGYLDEHIP-------KIIEFYKPRRDAML 323
Query: 363 DAFQSL---GLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEH- 418
+A + G++ + +V V P + E + +PG F ++
Sbjct: 324 EALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKN 383
Query: 419 -IRVS-AFGHREYISEACRRL 437
+R++ + E I E RRL
Sbjct: 384 TMRLNFTYVPEETIREGVRRL 404
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 110/299 (36%), Gaps = 35/299 (11%)
Query: 133 IEGDEIFISDGAQSDISRLQMLLG----SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKET 188
IE I +++G+QS L L T V P P YI G A L++
Sbjct: 96 IEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYI------GYADSGLEDD 149
Query: 189 GKYRNIVYMNCRPENNF-----FPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFA 243
+ PE F F L T I P NPTG+ T ++L KL A
Sbjct: 150 LFVSARPNIELLPEGQFKYHVDFEHLHIGEETGXICVSRPTNPTGNVITDEELXKLDRLA 209
Query: 244 KANGSIIVYDSAYAAYITDPSPRSIYE--IPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301
+ +V D+AY P P I+ P I S SK G G R G +
Sbjct: 210 NQHNIPLVIDNAYGV----PFPGIIFSEARPLWNPNIILCXSLSKL-GLPGSRCGIIIAN 264
Query: 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVID--YYKENAK 359
++ I + N I+ G + D + TVI YY+ +
Sbjct: 265 DKT-----ITAIANXNGIISLAPGGXGPAXXCEXIK--RNDLLRLSETVIKPFYYQRVQQ 317
Query: 360 IIVDAFQSLGLK---VNGGKNAPYVWVQFPGSS-SWDVFAEILEKTHILTIPGSGFGPG 414
I + L + ++ + A ++W+ F + ++ + L+ +L +PG F PG
Sbjct: 318 TIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLXVPGHYFFPG 376
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 138/360 (38%), Gaps = 91/360 (25%)
Query: 150 RLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFF--- 206
R+ LL + VA+ P F YI+ + A LKE V ++ P+N +
Sbjct: 185 RISGLLKAGDKVAIGMPVFTPYIEIPEL---AQYDLKE-------VPIHADPDNGWQYSD 234
Query: 207 PDLSTTSRTDI-IFFC-SPNNPTGHAATWQQLKKLVEFAKAN--GSIIVYDSAYAAYITD 262
+L D+ IFFC +P+NP + L ++ +I+ D Y + +
Sbjct: 235 AELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYGTFADE 294
Query: 263 PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLG-------------WTVVPE------E 303
+S++ + + + SFSK+ G TG RLG + +PE +
Sbjct: 295 F--QSLFSV--CPRNTLLVYSFSKYFGATGWRLGVIAAHKDNVFDHALSQLPESAKKALD 350
Query: 304 LRYSNGYPVIKDF---NRIVCTCFNGASNIVQAGGLACLS-PDGFQ-------ALRTVID 352
RY + P ++ +R+V S +V A LS P Q AL D
Sbjct: 351 HRYRSLLPDVRSLKFIDRLVAD-----SRVVALNHTAGLSTPQQVQMVLFSLFALMDEAD 405
Query: 353 YYKENAKIIV-----DAFQSLGLKVNGGKNAP--YVWVQFPG-----------------S 388
YK+ K ++ ++ LG+ N+ Y + S
Sbjct: 406 AYKQALKQLIRRREATLYRELGMPPLENPNSVNYYTLIDLQNVTCRLYGEAFSQWAVQQS 465
Query: 389 SSWDVFAEILEKTHILTIPGSGFG---PGGNEHIRVSAFGHREY----ISEACRRLKNFL 441
S+ D+ + ++T I+ +PG GFG P G R S EY I A RRL + L
Sbjct: 466 STGDMLFRVADETGIVLLPGRGFGSDRPSG----RASLANLNEYEYAAIGRALRRLADEL 521
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 103/283 (36%), Gaps = 29/283 (10%)
Query: 161 VAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFF 220
V V P++P + + G F+ TG +N F +R+ I
Sbjct: 108 VIVPTPAYPPFFHLLSATQREGIFIDATGG------INLHDVEKGF---QAGARS--ILL 156
Query: 221 CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG-AREVAI 279
C+P NP G + L +L + A + ++ D +A + D + A V I
Sbjct: 157 CNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCI 216
Query: 280 EISSFS---KFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGL 336
I++ S AG ++ ++ + + PVIKD GAS +
Sbjct: 217 TITAPSXAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKD----------GASTLGLIAAE 266
Query: 337 ACLSPDGFQALRTVIDYYKENAKIIVDAFQSL--GLKVNGGKNAPYVWVQFPGSSSWDVF 394
A G L + Y K N ++ G K+ + W+ F ++
Sbjct: 267 AAYR-YGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPXQATYLXWIDFRDTTIEGSP 325
Query: 395 AE-ILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRR 436
+E +EK + G+ FG G R++ RE + EA R
Sbjct: 326 SEFFIEKAKVAXNDGAWFGEDGTGFCRLNFATSREVLEEAIDR 368
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 22/209 (10%)
Query: 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAY-ITDPSPRSIYEIP 272
R + +P+NP G T +L L+ F + G ++ D Y+ + PS S+ E+
Sbjct: 174 RVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVL 233
Query: 273 GA---REVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASN 329
+ V + S K G G R+G YSN V+ ++ + F S+
Sbjct: 234 KDEVWQRVHVVYSLSXKDLGLPGFRVGAI-------YSNDDMVVAAATKM--SSFGLVSS 284
Query: 330 IVQAGGLACLSPDGFQALRTVIDY--YKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG 387
Q A LS ++ K+ K +V Q G+ G + WV
Sbjct: 285 QTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRH 344
Query: 388 -------SSSWDVFAEILEKTHILTIPGS 409
+ +++ +I+ + H+ PGS
Sbjct: 345 LLRSNTFEAEMELWKKIVYEVHLNISPGS 373
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 30/179 (16%)
Query: 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG---- 273
I + +PNNPT T ++L+ + E A + I++ D AY R Y PG
Sbjct: 186 IIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAYFGX----DFRKDYSHPGEPLY 241
Query: 274 -------AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKD-FNRI------ 319
+ +SS F+ + G R+G + +L Y YP +++ F R+
Sbjct: 242 QPSVANYTDNYILALSSSXAFS-YAGQRIGVLXISGKL-YEREYPDLEESFGRLRFGEAL 299
Query: 320 ----VCTCFNGASNIVQAGGLACLSP--DGFQALRTVIDYYKENAKIIVDAFQSLGLKV 372
+ +GA++ Q G A L DG R + Y A+I F G +
Sbjct: 300 SSSALYALSSGATHSAQWGXAAXLKACNDGEYNFRDSVIEYGRKARIXKKXFLDNGFNI 358
>pdb|1YAA|A Chain A, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|B Chain B, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|C Chain C, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|D Chain D, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
Length = 412
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREV 277
+ +NPTG T +Q ++V+ + I ++D+AY + T + Y + E
Sbjct: 180 VLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEK 239
Query: 278 AIEIS------SFSKFAGFTGVRLG 296
+S SF+K AG G R+G
Sbjct: 240 LSTVSPVFVCQSFAKNAGMYGERVG 264
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283
NNPTG++ T ++ K++ E A+ +I+ D Y + + I S
Sbjct: 201 NNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADS 260
Query: 284 FSKFAGFTGVRLGWTVVPEEL--------RYSNGYPVIKDFNRIVCTCFNGASNIVQAGG 335
FSK +G+R+G+ P+ L + S +P FN+++ S ++ G
Sbjct: 261 FSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHP--STFNQLMI------SQLLHEWG 311
Query: 336 LACLSPDGFQA-LRTVIDYYKENAKIIVDAFQS--LGL-KVNGGKNAPYVWVQFPG-SSS 390
+GF A + VID+Y I+ A GL + + ++W++ G +
Sbjct: 312 -----EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV 366
Query: 391 WDVFAEILEKTHILTIPGSGF 411
++ E K +L +PG+ F
Sbjct: 367 KELIEEKAVKMGVLMLPGNAF 387
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283
NNPTG++ T ++ K++ E A+ +I+ D Y + + I S
Sbjct: 201 NNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADS 260
Query: 284 FSKFAGFTGVRLGWTVVPEEL--------RYSNGYPVIKDFNRIVCTCFNGASNIVQAGG 335
FSK +G+R+G+ P+ L + S +P FN+++ S ++ G
Sbjct: 261 FSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHP--STFNQLMI------SQLLHEWG 311
Query: 336 LACLSPDGFQA-LRTVIDYYKENAKIIVDAFQS--LGL-KVNGGKNAPYVWVQFPG-SSS 390
+GF A + VID+Y I+ A GL + + ++W++ G +
Sbjct: 312 -----EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV 366
Query: 391 WDVFAEILEKTHILTIPGSGF 411
++ E K +L +PG+ F
Sbjct: 367 KELIEEKAVKMGVLMLPGNAF 387
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 39/222 (17%)
Query: 221 CS-PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR--EV 277
CS P NPTG+ T ++ L E AK ++ D+AY P P IY
Sbjct: 212 CSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYGX----PFPNIIYSDAHLNWDNN 267
Query: 278 AIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAG-GL 336
I S SK G G R G V + VI+ + N N+ G
Sbjct: 268 TILCFSLSKI-GLPGXRTGIIVADAK--------VIE-----AVSAXNAVVNLAPTRFGA 313
Query: 337 ACLSP----DGFQAL--RTVIDYYKENAKIIVDAF-QSLG---LKVNGGKNAPYVWVQFP 386
A +P D + L + +Y++ A + V Q+LG L ++ + A ++W+ F
Sbjct: 314 AIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLXIHKPEGAIFLWLWFK 373
Query: 387 GS--SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGH 426
S+ D++ E L+ L +P F PG + VS + H
Sbjct: 374 DLPISTLDLY-ERLKAKGTLIVPSEYFFPG----VDVSDYQH 410
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283
NNPTG++ T ++ K++ E A+ +I+ D Y + + I S
Sbjct: 201 NNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADS 260
Query: 284 FSKFAGFTGVRLGWTVVPEEL--------RYSNGYPVIKDFNRIVCTCFNGASNIVQAGG 335
FSK +G+R+G+ P+ L + S +P FN+++ S ++ G
Sbjct: 261 FSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHP--STFNQLMI------SQLLHEWG 311
Query: 336 LACLSPDGFQA-LRTVIDYYKENAKIIV---DAFQSLGLKVNGGKNAPYVWVQFPG-SSS 390
+GF A + VID+Y I+ D + + + + ++W++ G +
Sbjct: 312 -----EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV 366
Query: 391 WDVFAEILEKTHILTIPGSGF 411
++ E K +L +PG+ F
Sbjct: 367 KELIEEKAVKMGVLMLPGNAF 387
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283
NNPTG++ T ++ K++ E A+ +I+ D Y + + I S
Sbjct: 201 NNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADS 260
Query: 284 FSKFAGFTGVRLGWTVVPEEL--------RYSNGYPVIKDFNRIVCTCFNGASNIVQAGG 335
FSK +G+R+G+ P+ L + S +P FN+++ S ++ G
Sbjct: 261 FSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHP--STFNQLMI------SQLLHEWG 311
Query: 336 LACLSPDGFQA-LRTVIDYYKENAKIIV---DAFQSLGLKVNGGKNAPYVWVQFPG-SSS 390
+GF A + VID+Y I+ D + + + + ++W++ G +
Sbjct: 312 -----EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV 366
Query: 391 WDVFAEILEKTHILTIPGSGF 411
++ E K +L +PG+ F
Sbjct: 367 KELIEEKAVKMGVLMLPGNAF 387
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 41 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDF 99
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 100 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 159
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 160 LIEDNEXTAREGAKFP 175
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283
NNPTG++ T ++ K++ E A+ +I+ D Y + + I S
Sbjct: 201 NNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADS 260
Query: 284 FSKFAGFTGVRLGWTVVPEEL--------RYSNGYPVIKDFNRIVCTCFNGASNIVQAGG 335
FSK +G+R+G+ P+ L + S +P FN+++ S ++ G
Sbjct: 261 FSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHP--STFNQLMI------SQLLHEWG 311
Query: 336 LACLSPDGFQA-LRTVIDYYKENAKIIV---DAFQSLGLKVNGGKNAPYVWVQFPG-SSS 390
+GF A + VID+Y I+ D + + + + ++W++ G +
Sbjct: 312 -----EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV 366
Query: 391 WDVFAEILEKTHILTIPGSGF 411
++ E K +L +PG+ F
Sbjct: 367 KELIEEKAVKMGVLMLPGNAF 387
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 40 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDF 98
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 99 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 158
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 159 LIEDNEXTAREGAKFP 174
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDF 97
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 158 LIEDNEXTAREGAKFP 173
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDF 97
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 158 LIEDNEXTAREGAKFP 173
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 35 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDF 93
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 94 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLAR 153
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 154 LIEDNEYTAREGAKFP 169
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 48 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDF 106
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 107 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 166
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 167 LIEDNEXTAREGAKFP 182
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR 266
I+ CSP NPTG T +L+ + + + +G ++ D + + P
Sbjct: 165 IMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPH 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 45 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDF 103
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 104 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 164 LIEDNEXTAREGAKFP 179
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 47 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDF 105
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 106 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 165
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 166 LIEDNEXTAREGAKFP 181
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDF 97
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 158 LIEDNEYTAREGAKFP 173
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 34 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDF 92
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 93 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 152
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 153 LIEDNEYTAREGAKFP 168
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 45 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDF 103
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 104 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 164 LIEDNEYTAREGAKFP 179
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 44 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDF 102
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 103 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 162
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 163 LIEDNEYTAREGAKFP 178
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFA-- 100
V ++SL+ G + P+ + E+ +++ RL+RL T +PI IIT M +
Sbjct: 49 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDF 107
Query: 101 LSTVKGYKGYGAEQGNMALRTA-----IADKFYKDMGIEGDEIFISDGAQSDISR--LQM 153
L T G K + +MA + A I ++ Y + I +SD I+ L
Sbjct: 108 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 167
Query: 154 LLGSNVTVAVQDPSFP 169
L+ N A + FP
Sbjct: 168 LIEDNEYTAREGAKFP 183
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F S +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGSCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1PG8|A Chain A, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|B Chain B, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|C Chain C, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|D Chain D, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
Length = 398
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 208 DLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA-YITDPSPR 266
+ + T T +I+F SP NP H A + K+ A+ +G+ +V D+ Y Y+ P
Sbjct: 144 EAAMTPATRVIYFESPANPNMHMADIAGVAKI---ARKHGATVVVDNTYCTPYLQRP--- 197
Query: 267 SIYEIPGAREVAIEISSFSKFAGFT-GVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFN 325
E+ V S T G+ +G + + +R +KD V + +
Sbjct: 198 --LELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQG----LKDMTGAVLSPHD 251
Query: 326 GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVD 363
A L G + L +D + NA+++ +
Sbjct: 252 -----------AALLMRGIKTLNLRMDRHCANAQVLAE 278
>pdb|3VK2|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK3|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK4|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
Length = 398
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 208 DLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA-YITDPSPR 266
+ + T T +I+F SP NP H A + K+ A+ +G+ +V D+ Y Y+ P
Sbjct: 144 EAAMTPATRVIYFESPANPNMHMADIAGVAKI---ARKHGATVVVDNTYCTPYLQRP--- 197
Query: 267 SIYEIPGAREVAIEISSFSKFAGFT-GVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFN 325
E+ V S T G+ +G + + +R +KD V + +
Sbjct: 198 --LELGADLVVHSATXYLSGHGDITAGIVVGSQALVDRIRLQG----LKDMTGAVLSPHD 251
Query: 326 GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVD 363
A L G + L +D + NA+++ +
Sbjct: 252 -----------AALLMRGIKTLNLRMDRHCANAQVLAE 278
>pdb|1GC0|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1UKJ|A Chain A, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|B Chain B, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|C Chain C, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|D Chain D, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|2O7C|A Chain A, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|B Chain B, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|C Chain C, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|D Chain D, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
Length = 398
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 208 DLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA-YITDPSPR 266
+ + T T +I+F SP NP H A + K+ A+ +G+ +V D+ Y Y+ P
Sbjct: 144 EAAMTPATRVIYFESPANPNMHMADIAGVAKI---ARKHGATVVVDNTYCTPYLQRP--- 197
Query: 267 SIYEIPGAREVAIEISSFSKFAGFT-GVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFN 325
E+ V S T G+ +G + + +R +KD V + +
Sbjct: 198 --LELGADLVVHSATXYLSGHGDITAGIVVGSQALVDRIRLQG----LKDMTGAVLSPHD 251
Query: 326 GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVD 363
A L G + L +D + NA+++ +
Sbjct: 252 -----------AALLMRGIKTLNLRMDRHCANAQVLAE 278
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 27/201 (13%)
Query: 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283
NNPTG++ T ++ K++ E A+ +I+ D Y + + I S
Sbjct: 203 NNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADS 262
Query: 284 FSKFAGFTGVRLGWTVVPEEL--------RYSNGYPVIKDFNRIVCTCFNGASNIVQAGG 335
FS +G+R+G+ P+ L + S +P FN+++ S ++ G
Sbjct: 263 FSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHP--STFNQLMI------SQLLHEWG 313
Query: 336 LACLSPDGFQA-LRTVIDYYKENAKIIV---DAFQSLGLKVNGGKNAPYVWVQFPG-SSS 390
+GF A + VID+Y I+ D + + + + ++W++ G +
Sbjct: 314 -----EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV 368
Query: 391 WDVFAEILEKTHILTIPGSGF 411
++ E K +L +PG+ F
Sbjct: 369 KELIEEKAVKMGVLMLPGNAF 389
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 27/201 (13%)
Query: 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283
NNPTG++ T ++ K++ E A+ +I+ D Y + + I S
Sbjct: 201 NNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADS 260
Query: 284 FSKFAGFTGVRLGWTVVPEEL--------RYSNGYPVIKDFNRIVCTCFNGASNIVQAGG 335
FS +G+R+G+ P+ L + S +P FN+++ S ++ G
Sbjct: 261 FSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHP--STFNQLMI------SQLLHEWG 311
Query: 336 LACLSPDGFQA-LRTVIDYYKENAKIIV---DAFQSLGLKVNGGKNAPYVWVQFPG-SSS 390
+GF A + VID+Y I+ D + + + + ++W++ G +
Sbjct: 312 -----EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV 366
Query: 391 WDVFAEILEKTHILTIPGSGF 411
++ E K +L +PG+ F
Sbjct: 367 KELIEEKAVKMGVLMLPGNAF 387
>pdb|3BWN|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWN|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWN|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWN|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWN|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGARE 276
I SPNNP G + +V + + +++D AY Y +P I ++
Sbjct: 160 IELVTSPNNPDGTIR-----ETVVNRPDDDEAKVIHDFAY--YWPHYTP-----ITRRQD 207
Query: 277 VAIEISSFSKFAGFTGVRLGWTVVPEE 303
I + +FSK G G R+GW +V ++
Sbjct: 208 HDIMLFTFSKITGHAGSRIGWALVKDK 234
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKAN--GSIIVYDSAYAAYITDPSPRSIYEIPGA 274
I++ PNNPTG+ + +V A+ + S++V D AY + + + + G
Sbjct: 160 IVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQPFAQESWXSRLTDF-GN 218
Query: 275 REVAIEISSFSKFAGFTGVRLGWT 298
V +S G G+RLG+
Sbjct: 219 LLVXRTVSKL----GLAGIRLGYV 238
>pdb|1F6F|A Chain A, Crystal Structure Of The Ternary Complex Between Ovine
Placental Lactogen And The Extracellular Domain Of The
Rat Prolactin Receptor
Length = 199
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 346 ALRTVIDYYKENAKIIVDAFQSLGLKVN-GGKNAPY-VWVQFPGSSSWD 392
AL T KE AK++VD + + +++ G KN PY VW + +S D
Sbjct: 113 ALLTKAQEIKEKAKVLVDGVEVIQKRIHPGEKNEPYPVWSEQSSLTSQD 161
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|3KRU|A Chain A, Crystal Structure Of The Thermostable Old Yellow Enzyme
From Thermoanaerobacter Pseudethanolicus E39
pdb|3KRU|B Chain B, Crystal Structure Of The Thermostable Old Yellow Enzyme
From Thermoanaerobacter Pseudethanolicus E39
pdb|3KRU|C Chain C, Crystal Structure Of The Thermostable Old Yellow Enzyme
From Thermoanaerobacter Pseudethanolicus E39
pdb|3KRU|D Chain D, Crystal Structure Of The Thermostable Old Yellow Enzyme
From Thermoanaerobacter Pseudethanolicus E39
Length = 343
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 20/98 (20%)
Query: 234 QQLKKLVEFAKANGSIIVYDSAYAAY--------ITDPSPRSI---YEIPGAREVAI-EI 281
++LKK+V+ KANG+++ A+A + PSP Y++P RE+++ EI
Sbjct: 81 KELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLP--RELSVEEI 138
Query: 282 SSFSKFAGFTGVR---LGWTVVPEELRYSNGYPVIKDF 316
S K G R G+ VV E+ ++GY +I +F
Sbjct: 139 KSIVKAFGEAAKRANLAGYDVV--EIHAAHGY-LIHEF 173
>pdb|3KRZ|A Chain A, Crystal Structure Of The Thermostable Nadh4-Bound Old
Yellow Enzyme From Thermoanaerobacter Pseudethanolicus
E39
pdb|3KRZ|B Chain B, Crystal Structure Of The Thermostable Nadh4-Bound Old
Yellow Enzyme From Thermoanaerobacter Pseudethanolicus
E39
pdb|3KRZ|C Chain C, Crystal Structure Of The Thermostable Nadh4-Bound Old
Yellow Enzyme From Thermoanaerobacter Pseudethanolicus
E39
pdb|3KRZ|D Chain D, Crystal Structure Of The Thermostable Nadh4-Bound Old
Yellow Enzyme From Thermoanaerobacter Pseudethanolicus
E39
Length = 337
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 20/98 (20%)
Query: 234 QQLKKLVEFAKANGSIIVYDSAYAAY--------ITDPSPRSI---YEIPGAREVAI-EI 281
++LKK+V+ KANG+++ A+A + PSP Y++P RE+++ EI
Sbjct: 81 KELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLP--RELSVEEI 138
Query: 282 SSFSKFAGFTGVR---LGWTVVPEELRYSNGYPVIKDF 316
S K G R G+ VV E+ ++GY +I +F
Sbjct: 139 KSIVKAFGEAAKRANLAGYDVV--EIHAAHGY-LIHEF 173
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 205 FFPDLSTTSRTDI-IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263
F DL I + +NPTG T +Q K++ K +DSAY + +
Sbjct: 173 FLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGN 232
Query: 264 SPRSIYEIPGAREVAIEI---SSFSKFAGFTGVRLG-WTVVPEE 303
+ + I E+ SFSK G R+G TVV +E
Sbjct: 233 LEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKE 276
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYA 257
+ F +PNNP G + +++ ++ A G+ ++ D Y+
Sbjct: 182 VFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYS 222
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGS-----IIVYDSAY 256
I+ PNNPTG+ T +++ +VE KA + I V D AY
Sbjct: 192 IMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAY 236
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 175 VLFHGYCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 12/141 (8%)
Query: 161 VAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFF 220
V V +PS+P + + AG ++E Y + + L+ D++ F
Sbjct: 123 VWVSNPSWPNH---KSVFNSAGLEVREYAYYD--AENHTLDFDALINSLNEAQAGDVVLF 177
Query: 221 ---CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGAR 275
C +NPTG T +Q + L + + G + ++D AY + + +
Sbjct: 178 HGWC--HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMH 235
Query: 276 EVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 236 KELIVASSYSKNFGLYNERVG 256
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGAREV 277
FC +NPTG T +Q + L + + G + ++D AY + + + +
Sbjct: 180 FC--HNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKE 237
Query: 278 AIEISSFSKFAGFTGVRLG 296
I SS+SK G R+G
Sbjct: 238 LIVASSYSKNFGLYNERVG 256
>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|B Chain B, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|C Chain C, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|D Chain D, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
Length = 422
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 205 FFPDLSTTSRTDIIFF-CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263
F DL I+ +NPTG T +Q K++ K +DSAY + +
Sbjct: 162 FLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGN 221
Query: 264 SPRSIYEIPGAREVAIEI---SSFSKFAGFTGVRLG-WTVVPEE 303
R + I E SFSK G R+G TVV +E
Sbjct: 222 LERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKE 265
>pdb|4G63|A Chain A, Crystal Structure Of Cytosolic Imp-Gmp Specific
5'-Nucleotidase (Lpg0095) In Complex With Phosphate Ions
From Legionella Pneumophila, Northeast Structural
Genomics Consortium Target Lgr1
Length = 470
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 124 ADKFYKDMGIEGDEI-FISDGAQSDISRLQ 152
A KF +D+G+ GDEI +I D DI RL+
Sbjct: 284 AKKFTEDLGVGGDEILYIGDHIYGDILRLK 313
>pdb|2BDE|A Chain A, Crystal Structure Of The Cytosolic Imp-Gmp Specific
5'-Nucleotidase (Lpg0095) From Legionella Pneumophila,
Northeast Structural Genomics Target Lgr1
Length = 470
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 124 ADKFYKDMGIEGDEI-FISDGAQSDISRLQ 152
A KF +D+G+ GDEI +I D DI RL+
Sbjct: 284 AKKFTEDLGVGGDEILYIGDHIYGDILRLK 313
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI--TDPSPRSIYEIPGA 274
++F +NPTG T +Q + L + + G + ++D A+ + + +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARGLEEDAEGLRAFAAM 234
Query: 275 REVAIEISSFSKFAGFTGVRLG 296
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJR|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJS|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 205 FFPDLSTTSRTDI-IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263
F DL I + +NPTG T +Q K++ K +DSAY + +
Sbjct: 173 FLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGN 232
Query: 264 SPRSIYEIPGAREVAIEI---SSFSKFAGFTGVRLG-WTVVPEE 303
+ + I E+ SFS G R+G TVV +E
Sbjct: 233 LEKDAWAIRYFVSEGFELFCAQSFSXNFGLYNERVGNLTVVAKE 276
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,130,538
Number of Sequences: 62578
Number of extensions: 608990
Number of successful extensions: 1780
Number of sequences better than 100.0: 144
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 1619
Number of HSP's gapped (non-prelim): 158
length of query: 441
length of database: 14,973,337
effective HSP length: 102
effective length of query: 339
effective length of database: 8,590,381
effective search space: 2912139159
effective search space used: 2912139159
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)