Query 013521
Match_columns 441
No_of_seqs 218 out of 2923
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 04:41:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013521.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013521hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 4E-61 8.6E-66 465.2 41.2 344 72-440 28-388 (393)
2 PRK07590 L,L-diaminopimelate a 100.0 1.8E-58 3.9E-63 454.8 43.2 395 45-441 7-409 (409)
3 TIGR03542 DAPAT_plant LL-diami 100.0 1.3E-56 2.7E-61 440.7 43.1 397 43-441 4-402 (402)
4 COG1167 ARO8 Transcriptional r 100.0 2.4E-57 5.3E-62 448.5 37.3 392 14-441 40-453 (459)
5 PRK15481 transcriptional regul 100.0 1.2E-56 2.5E-61 445.0 34.8 378 14-441 41-429 (431)
6 PRK07366 succinyldiaminopimela 100.0 1.3E-55 2.9E-60 432.2 38.1 346 71-441 29-388 (388)
7 PRK07681 aspartate aminotransf 100.0 1.6E-54 3.6E-59 425.6 39.1 343 71-439 31-384 (399)
8 PLN00175 aminotransferase fami 100.0 3.7E-54 8E-59 423.3 39.3 343 72-441 54-411 (413)
9 PRK08636 aspartate aminotransf 100.0 9.3E-54 2E-58 420.6 40.0 346 71-441 32-398 (403)
10 PRK08068 transaminase; Reviewe 100.0 8.7E-54 1.9E-58 419.2 38.5 345 71-440 31-386 (389)
11 PRK06348 aspartate aminotransf 100.0 1.4E-53 3E-58 416.9 38.9 343 72-440 29-382 (384)
12 PRK09148 aminotransferase; Val 100.0 1.4E-53 3.1E-58 419.0 38.8 346 71-441 29-388 (405)
13 KOG0257 Kynurenine aminotransf 100.0 1.2E-54 2.6E-59 398.0 27.8 356 53-439 18-415 (420)
14 TIGR03540 DapC_direct LL-diami 100.0 3.2E-53 6.9E-58 414.8 39.7 344 71-439 28-382 (383)
15 PRK06207 aspartate aminotransf 100.0 4.8E-53 1E-57 415.0 39.1 345 72-441 39-400 (405)
16 PRK06290 aspartate aminotransf 100.0 7.7E-53 1.7E-57 412.9 39.8 358 53-441 25-403 (410)
17 PRK08960 hypothetical protein; 100.0 1.1E-52 2.3E-57 411.2 40.7 343 71-441 31-385 (387)
18 PRK09276 LL-diaminopimelate am 100.0 8.2E-53 1.8E-57 412.2 39.3 345 71-440 30-385 (385)
19 PRK07682 hypothetical protein; 100.0 4.5E-53 9.7E-58 413.0 36.9 344 72-441 20-374 (378)
20 PRK09147 succinyldiaminopimela 100.0 1E-52 2.2E-57 412.7 37.7 342 70-441 27-394 (396)
21 PRK06855 aminotransferase; Val 100.0 7.1E-53 1.5E-57 416.7 36.7 352 71-441 31-427 (433)
22 PRK05839 hypothetical protein; 100.0 3.2E-52 6.9E-57 405.4 40.2 353 53-441 6-372 (374)
23 PRK05942 aspartate aminotransf 100.0 2.2E-52 4.7E-57 409.9 38.8 345 71-440 34-389 (394)
24 PLN00143 tyrosine/nicotianamin 100.0 3.6E-52 7.9E-57 409.3 39.7 353 67-441 27-402 (409)
25 PLN02187 rooty/superroot1 100.0 4.5E-52 9.7E-57 412.6 40.1 351 68-441 62-436 (462)
26 TIGR03538 DapC_gpp succinyldia 100.0 6.8E-52 1.5E-56 406.4 39.7 342 70-441 26-393 (393)
27 COG1168 MalY Bifunctional PLP- 100.0 4.5E-52 9.8E-57 377.4 33.7 363 53-441 2-384 (388)
28 PLN00145 tyrosine/nicotianamin 100.0 8.9E-52 1.9E-56 407.9 38.3 349 71-441 51-422 (430)
29 PRK07337 aminotransferase; Val 100.0 1.3E-51 2.8E-56 403.9 38.8 343 71-441 29-387 (388)
30 PRK12414 putative aminotransfe 100.0 1.4E-51 3.1E-56 402.4 38.4 341 72-440 29-384 (384)
31 PRK07683 aminotransferase A; V 100.0 1.6E-51 3.5E-56 402.5 38.7 343 72-441 28-381 (387)
32 PTZ00377 alanine aminotransfer 100.0 1.5E-51 3.3E-56 412.6 37.1 349 70-441 44-473 (481)
33 PLN02450 1-aminocyclopropane-1 100.0 5E-52 1.1E-56 412.9 32.6 348 72-441 38-428 (468)
34 PLN02656 tyrosine transaminase 100.0 4E-51 8.7E-56 402.1 37.9 352 70-441 29-401 (409)
35 PRK08912 hypothetical protein; 100.0 5.3E-51 1.1E-55 399.5 38.3 343 72-441 26-384 (387)
36 PRK08175 aminotransferase; Val 100.0 2.7E-51 5.9E-56 402.2 36.3 346 71-441 28-387 (395)
37 PTZ00433 tyrosine aminotransfe 100.0 6.1E-51 1.3E-55 401.5 38.0 349 69-441 30-406 (412)
38 PRK13355 bifunctional HTH-doma 100.0 3.9E-51 8.4E-56 412.9 37.0 347 70-441 144-512 (517)
39 PRK06108 aspartate aminotransf 100.0 1E-50 2.2E-55 397.5 38.3 344 72-441 24-380 (382)
40 PRK09082 methionine aminotrans 100.0 6.2E-51 1.3E-55 398.5 36.0 342 72-440 30-386 (386)
41 PRK07324 transaminase; Validat 100.0 4.8E-51 1E-55 396.7 33.8 336 71-441 25-368 (373)
42 PRK08361 aspartate aminotransf 100.0 1.1E-50 2.3E-55 397.7 36.5 343 72-441 33-388 (391)
43 TIGR03537 DapC succinyldiamino 100.0 1.9E-50 4E-55 390.1 37.2 336 74-440 2-350 (350)
44 PRK06107 aspartate aminotransf 100.0 1.9E-50 4.1E-55 397.0 37.7 343 71-441 32-398 (402)
45 PLN02376 1-aminocyclopropane-1 100.0 8.1E-51 1.8E-55 405.3 35.5 349 72-441 46-436 (496)
46 TIGR01264 tyr_amTase_E tyrosin 100.0 2.8E-50 6E-55 396.1 37.8 348 70-441 29-397 (401)
47 PRK07309 aromatic amino acid a 100.0 4.4E-50 9.5E-55 392.9 38.7 341 72-441 30-386 (391)
48 PRK05957 aspartate aminotransf 100.0 9E-50 1.9E-54 390.5 37.9 344 72-440 27-382 (389)
49 PRK08363 alanine aminotransfer 100.0 1.4E-49 3E-54 390.8 37.9 343 71-441 29-392 (398)
50 PRK07550 hypothetical protein; 100.0 3.4E-49 7.5E-54 386.5 38.8 345 70-440 27-384 (386)
51 PLN02607 1-aminocyclopropane-1 100.0 1.2E-49 2.6E-54 392.8 34.8 348 72-441 47-435 (447)
52 PRK09265 aminotransferase AlaT 100.0 7.2E-49 1.6E-53 386.2 39.8 349 69-441 30-399 (404)
53 PRK07777 aminotransferase; Val 100.0 5.3E-49 1.1E-53 385.3 38.4 343 72-440 24-383 (387)
54 PRK09275 aspartate aminotransf 100.0 1.6E-49 3.4E-54 392.4 32.4 359 58-441 79-515 (527)
55 PRK07865 N-succinyldiaminopime 100.0 1.6E-48 3.5E-53 378.8 38.9 329 72-438 27-363 (364)
56 TIGR01265 tyr_nico_aTase tyros 100.0 1.6E-48 3.4E-53 383.5 38.9 349 70-441 29-399 (403)
57 PRK07568 aspartate aminotransf 100.0 2E-48 4.4E-53 382.9 38.5 342 72-441 30-390 (397)
58 TIGR03539 DapC_actino succinyl 100.0 4.6E-48 9.9E-53 374.3 40.1 345 54-438 5-357 (357)
59 PLN02231 alanine transaminase 100.0 1.1E-48 2.4E-53 392.0 36.3 345 72-440 129-524 (534)
60 KOG0259 Tyrosine aminotransfer 100.0 4.7E-48 1E-52 348.2 35.8 349 72-440 61-430 (447)
61 PRK05764 aspartate aminotransf 100.0 3.4E-48 7.3E-53 380.8 38.2 343 71-441 30-389 (393)
62 PRK06358 threonine-phosphate d 100.0 1.8E-47 4E-52 369.2 35.4 329 73-441 20-353 (354)
63 PRK09440 avtA valine--pyruvate 100.0 3.1E-47 6.7E-52 376.4 37.4 350 72-441 30-409 (416)
64 PRK07392 threonine-phosphate d 100.0 1.8E-47 3.9E-52 370.7 33.9 326 72-438 22-357 (360)
65 PRK14809 histidinol-phosphate 100.0 2.1E-47 4.6E-52 370.0 32.8 322 71-441 29-355 (357)
66 TIGR03801 asp_4_decarbox aspar 100.0 2.5E-47 5.4E-52 376.3 33.1 344 73-441 95-514 (521)
67 PTZ00376 aspartate aminotransf 100.0 1.5E-47 3.3E-52 376.3 30.5 340 72-441 29-401 (404)
68 PRK09257 aromatic amino acid a 100.0 4.9E-47 1.1E-51 372.2 32.0 336 72-441 26-396 (396)
69 PRK01533 histidinol-phosphate 100.0 4.5E-47 9.7E-52 367.3 29.3 321 71-440 28-352 (366)
70 PRK06836 aspartate aminotransf 100.0 1.8E-45 3.9E-50 360.7 40.3 342 71-441 32-389 (394)
71 PRK07908 hypothetical protein; 100.0 5.7E-46 1.2E-50 358.9 35.6 323 71-440 21-344 (349)
72 PRK06425 histidinol-phosphate 100.0 2.2E-46 4.7E-51 358.8 30.9 314 73-441 17-331 (332)
73 PLN02672 methionine S-methyltr 100.0 8.9E-46 1.9E-50 386.2 36.7 340 71-440 696-1077(1082)
74 PRK08056 threonine-phosphate d 100.0 1E-45 2.3E-50 357.7 34.5 328 71-440 19-352 (356)
75 PRK02610 histidinol-phosphate 100.0 6.5E-46 1.4E-50 361.3 32.8 324 73-441 29-369 (374)
76 PRK03158 histidinol-phosphate 100.0 7.6E-46 1.7E-50 359.6 31.4 326 72-441 29-359 (359)
77 PF00155 Aminotran_1_2: Aminot 100.0 2.7E-46 5.8E-51 363.8 26.2 336 73-437 2-363 (363)
78 PLN02397 aspartate transaminas 100.0 2.7E-45 5.8E-50 361.4 32.3 342 70-441 46-419 (423)
79 PRK05166 histidinol-phosphate 100.0 2E-45 4.3E-50 357.7 30.9 328 71-438 35-369 (371)
80 PRK05387 histidinol-phosphate 100.0 4.2E-45 9.1E-50 353.8 32.2 324 72-441 24-351 (353)
81 COG0079 HisC Histidinol-phosph 100.0 1E-44 2.3E-49 344.6 32.2 322 72-440 22-351 (356)
82 PRK04870 histidinol-phosphate 100.0 1E-44 2.2E-49 351.3 32.3 324 72-441 26-356 (356)
83 PRK06225 aspartate aminotransf 100.0 4.5E-44 9.8E-49 349.6 36.6 335 72-441 28-374 (380)
84 PRK09105 putative aminotransfe 100.0 1.7E-44 3.6E-49 350.0 33.2 322 72-440 43-367 (370)
85 PRK08153 histidinol-phosphate 100.0 1.3E-44 2.9E-49 351.3 31.6 323 72-440 32-362 (369)
86 PRK08637 hypothetical protein; 100.0 1.5E-44 3.2E-49 353.6 31.6 341 74-441 5-384 (388)
87 PRK14808 histidinol-phosphate 100.0 4.2E-44 9.1E-49 342.8 34.0 317 71-440 18-334 (335)
88 PLN03026 histidinol-phosphate 100.0 3.7E-44 8.1E-49 349.1 32.6 320 71-440 51-379 (380)
89 PLN02368 alanine transaminase 100.0 6.8E-45 1.5E-49 354.4 27.2 292 71-386 37-396 (407)
90 PRK03317 histidinol-phosphate 100.0 5.7E-44 1.2E-48 347.4 31.3 326 73-440 27-361 (368)
91 PRK04781 histidinol-phosphate 100.0 1.7E-43 3.8E-48 342.6 31.6 318 73-439 32-359 (364)
92 PRK02731 histidinol-phosphate 100.0 2.4E-43 5.1E-48 343.3 32.0 329 70-441 30-364 (367)
93 PRK06959 putative threonine-ph 100.0 7.1E-43 1.5E-47 334.6 32.4 306 72-440 24-330 (339)
94 PRK14807 histidinol-phosphate 100.0 1.8E-42 3.8E-47 334.5 33.4 321 73-440 23-349 (351)
95 PRK04635 histidinol-phosphate 100.0 3.3E-43 7.1E-48 340.0 27.6 317 72-439 31-351 (354)
96 PRK01688 histidinol-phosphate 100.0 3.3E-43 7.1E-48 339.2 27.0 316 73-438 29-351 (351)
97 TIGR01141 hisC histidinol-phos 100.0 1.1E-42 2.3E-47 336.1 30.2 321 72-438 19-346 (346)
98 PRK05664 threonine-phosphate d 100.0 3.3E-42 7.2E-47 329.4 32.9 304 73-440 21-325 (330)
99 KOG0256 1-aminocyclopropane-1- 100.0 1.3E-42 2.7E-47 315.9 26.6 316 106-441 113-459 (471)
100 PRK00950 histidinol-phosphate 100.0 4.5E-42 9.7E-47 333.7 30.7 320 72-441 34-360 (361)
101 PRK03967 histidinol-phosphate 100.0 9.4E-42 2E-46 327.2 30.0 311 72-438 18-332 (337)
102 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.8E-41 3.9E-46 324.5 30.2 314 71-438 16-330 (330)
103 PRK03321 putative aminotransfe 100.0 1.4E-41 3.1E-46 328.8 29.2 321 73-440 23-348 (352)
104 PRK08354 putative aminotransfe 100.0 1.9E-40 4.1E-45 314.8 32.7 301 72-439 8-308 (311)
105 KOG0634 Aromatic amino acid am 100.0 6E-40 1.3E-44 301.0 26.3 313 106-441 92-464 (472)
106 cd00609 AAT_like Aspartate ami 100.0 6.2E-36 1.3E-40 289.3 36.9 340 75-439 1-350 (350)
107 PRK13238 tnaA tryptophanase/L- 100.0 1.4E-33 3.1E-38 278.3 30.5 329 71-440 35-430 (460)
108 COG3977 Alanine-alpha-ketoisov 100.0 4.4E-33 9.5E-38 243.8 29.2 342 72-440 30-408 (417)
109 TIGR03576 pyridox_MJ0158 pyrid 100.0 2.5E-32 5.4E-37 261.1 32.3 306 84-441 32-345 (346)
110 TIGR00858 bioF 8-amino-7-oxono 100.0 4.6E-32 1E-36 263.5 30.5 331 71-438 15-360 (360)
111 PRK06939 2-amino-3-ketobutyrat 100.0 2.6E-31 5.7E-36 261.7 29.9 336 71-440 41-390 (397)
112 PLN02822 serine palmitoyltrans 100.0 5.1E-31 1.1E-35 262.6 29.5 338 70-440 107-474 (481)
113 KOG0258 Alanine aminotransfera 100.0 1.7E-30 3.6E-35 235.3 27.3 331 86-439 87-465 (475)
114 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.8E-30 3.8E-35 254.6 29.6 336 71-440 32-378 (385)
115 PLN02483 serine palmitoyltrans 100.0 3.1E-30 6.8E-35 257.4 30.2 335 71-440 99-463 (489)
116 TIGR01822 2am3keto_CoA 2-amino 100.0 3.3E-30 7.1E-35 253.3 29.9 329 71-440 37-386 (393)
117 TIGR03392 FeS_syn_CsdA cystein 100.0 3.1E-30 6.7E-35 253.7 29.7 335 73-440 16-392 (398)
118 PRK05958 8-amino-7-oxononanoat 100.0 6.8E-30 1.5E-34 250.5 31.3 333 71-441 38-385 (385)
119 PRK10534 L-threonine aldolase; 100.0 4E-30 8.6E-35 247.0 26.9 312 74-441 1-331 (333)
120 PRK10874 cysteine sulfinate de 100.0 2.4E-29 5.2E-34 247.7 30.3 335 73-440 19-395 (401)
121 PRK13392 5-aminolevulinate syn 100.0 1.3E-29 2.9E-34 249.9 27.3 335 72-440 46-394 (410)
122 KOG0633 Histidinol phosphate a 100.0 5.3E-30 1.1E-34 220.2 19.3 321 71-441 40-375 (375)
123 cd06454 KBL_like KBL_like; thi 100.0 6.2E-29 1.3E-33 240.5 28.5 331 73-440 2-348 (349)
124 cd00617 Tnase_like Tryptophana 100.0 2.8E-28 6E-33 237.4 28.9 330 70-440 9-405 (431)
125 PLN02721 threonine aldolase 100.0 5.5E-28 1.2E-32 234.2 28.3 320 73-441 6-350 (353)
126 PLN02855 Bifunctional selenocy 100.0 7.4E-28 1.6E-32 238.6 28.2 340 72-440 31-415 (424)
127 TIGR00707 argD acetylornithine 100.0 6.2E-28 1.3E-32 236.1 27.1 334 71-441 26-379 (379)
128 TIGR01979 sufS cysteine desulf 100.0 1.4E-27 3E-32 235.4 28.8 340 71-440 16-398 (403)
129 PRK02627 acetylornithine amino 100.0 1E-27 2.2E-32 236.0 27.7 338 70-441 37-392 (396)
130 COG1448 TyrB Aspartate/tyrosin 100.0 1.8E-27 4E-32 217.1 26.8 342 68-441 22-396 (396)
131 cd06451 AGAT_like Alanine-glyo 100.0 4.4E-27 9.5E-32 228.1 30.1 313 84-441 8-355 (356)
132 PRK09064 5-aminolevulinate syn 100.0 3.2E-27 6.9E-32 233.0 29.3 336 71-440 45-394 (407)
133 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2.5E-27 5.5E-32 230.3 27.8 279 116-440 53-365 (370)
134 PRK09295 bifunctional cysteine 100.0 3.7E-27 7.9E-32 232.4 29.1 338 73-440 23-401 (406)
135 cd06502 TA_like Low-specificit 100.0 2.5E-27 5.4E-32 228.2 27.1 305 82-439 6-337 (338)
136 PRK02948 cysteine desulfurase; 100.0 1.9E-27 4E-32 232.7 26.5 334 75-440 2-371 (381)
137 cd00378 SHMT Serine-glycine hy 100.0 6.1E-27 1.3E-31 230.8 29.9 333 73-441 20-383 (402)
138 COG0520 csdA Selenocysteine ly 100.0 1.3E-26 2.9E-31 224.1 31.2 340 71-440 20-402 (405)
139 PRK07179 hypothetical protein; 100.0 6.1E-27 1.3E-31 230.8 28.5 334 70-440 52-395 (407)
140 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.4E-26 3E-31 224.8 30.3 314 82-440 9-359 (361)
141 TIGR01821 5aminolev_synth 5-am 100.0 1.1E-26 2.4E-31 228.6 28.9 334 72-440 45-393 (402)
142 TIGR01976 am_tr_V_VC1184 cyste 100.0 2.6E-26 5.6E-31 226.0 30.3 331 74-437 18-397 (397)
143 PRK03244 argD acetylornithine 100.0 3.5E-27 7.6E-32 232.0 23.6 340 70-441 41-392 (398)
144 TIGR03403 nifS_epsilon cystein 100.0 1.8E-26 3.9E-31 225.8 28.2 328 85-440 10-372 (382)
145 TIGR01977 am_tr_V_EF2568 cyste 100.0 2.4E-26 5.2E-31 224.7 28.7 337 76-439 2-375 (376)
146 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 5.7E-26 1.2E-30 220.3 29.4 321 83-441 7-355 (355)
147 PF12897 Aminotran_MocR: Alani 100.0 5E-26 1.1E-30 208.0 25.0 305 107-439 61-411 (425)
148 PLN02409 serine--glyoxylate am 100.0 1.1E-25 2.4E-30 220.9 29.0 326 83-441 17-370 (401)
149 cd06453 SufS_like Cysteine des 99.9 6.7E-26 1.4E-30 221.3 26.8 321 85-437 10-373 (373)
150 cd00613 GDC-P Glycine cleavage 99.9 1.5E-25 3.2E-30 220.8 27.1 334 72-437 20-398 (398)
151 cd00610 OAT_like Acetyl ornith 99.9 1.3E-25 2.8E-30 222.3 26.8 339 70-441 34-413 (413)
152 TIGR02326 transamin_PhnW 2-ami 99.9 3.1E-25 6.7E-30 215.6 28.9 295 116-441 37-360 (363)
153 PRK13393 5-aminolevulinate syn 99.9 4.7E-25 1E-29 217.2 30.2 335 72-440 45-393 (406)
154 PRK01278 argD acetylornithine 99.9 3.8E-25 8.1E-30 216.8 29.0 333 71-441 30-386 (389)
155 PLN03227 serine palmitoyltrans 99.9 7.5E-25 1.6E-29 213.7 28.3 331 76-441 2-380 (392)
156 PRK13479 2-aminoethylphosphona 99.9 3.9E-25 8.5E-30 215.3 26.2 320 83-441 13-361 (368)
157 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.5E-24 5.4E-29 210.5 29.8 324 72-440 18-378 (387)
158 PRK07049 methionine gamma-lyas 99.9 8.8E-25 1.9E-29 214.6 26.4 223 108-370 78-314 (427)
159 TIGR03402 FeS_nifS cysteine de 99.9 1.4E-24 3E-29 212.3 27.7 326 85-440 10-369 (379)
160 PRK02936 argD acetylornithine 99.9 3.1E-24 6.7E-29 209.6 29.9 333 71-441 28-377 (377)
161 PRK05093 argD bifunctional N-s 99.9 1.3E-24 2.8E-29 213.7 27.3 333 71-441 39-398 (403)
162 PRK00451 glycine dehydrogenase 99.9 2.4E-24 5.3E-29 214.9 28.7 337 73-441 69-446 (447)
163 PLN02242 methionine gamma-lyas 99.9 4.1E-24 8.8E-29 209.2 26.7 220 112-374 74-303 (418)
164 cd06450 DOPA_deC_like DOPA dec 99.9 1.3E-24 2.8E-29 210.0 21.3 298 87-440 12-345 (345)
165 PRK04073 rocD ornithine--oxo-a 99.9 7.3E-24 1.6E-28 207.9 26.3 337 70-441 38-395 (396)
166 PRK08247 cystathionine gamma-s 99.9 4.6E-24 9.9E-29 206.6 23.3 271 107-425 46-348 (366)
167 PRK08088 4-aminobutyrate amino 99.9 1.8E-23 3.8E-28 206.7 26.6 343 70-441 39-421 (425)
168 PRK00011 glyA serine hydroxyme 99.9 6.4E-23 1.4E-27 203.0 30.2 334 72-440 25-386 (416)
169 TIGR02006 IscS cysteine desulf 99.9 2.4E-23 5.3E-28 204.7 26.7 336 74-440 4-374 (402)
170 PRK04260 acetylornithine amino 99.9 1E-22 2.2E-27 198.5 30.1 334 71-441 28-375 (375)
171 COG0156 BioF 7-keto-8-aminopel 99.9 5.9E-23 1.3E-27 195.0 26.9 335 71-440 38-387 (388)
172 PRK06234 methionine gamma-lyas 99.9 4.9E-23 1.1E-27 201.3 25.3 213 112-368 62-284 (400)
173 PRK06460 hypothetical protein; 99.9 1.2E-22 2.5E-27 197.0 27.5 212 113-368 44-261 (376)
174 PRK13520 L-tyrosine decarboxyl 99.9 3.4E-22 7.4E-27 195.0 30.6 318 85-441 31-369 (371)
175 PRK14012 cysteine desulfurase; 99.9 7.2E-23 1.6E-27 201.7 26.0 334 74-440 4-376 (404)
176 PRK07582 cystathionine gamma-l 99.9 4.4E-22 9.6E-27 192.4 30.2 280 107-438 45-364 (366)
177 TIGR03812 tyr_de_CO2_Arch tyro 99.9 8.2E-22 1.8E-26 192.4 32.5 286 117-440 62-373 (373)
178 TIGR03235 DNA_S_dndA cysteine 99.9 2E-23 4.4E-28 202.1 20.9 320 85-433 9-348 (353)
179 PRK08133 O-succinylhomoserine 99.9 2.9E-22 6.2E-27 195.3 28.3 214 113-370 60-280 (390)
180 COG1104 NifS Cysteine sulfinat 99.9 1.9E-22 4.2E-27 188.1 25.2 335 75-440 3-374 (386)
181 TIGR02080 O_succ_thio_ly O-suc 99.9 3E-22 6.5E-27 194.2 27.1 220 107-368 45-268 (382)
182 TIGR00713 hemL glutamate-1-sem 99.9 6.5E-23 1.4E-27 203.1 22.9 336 70-441 46-420 (423)
183 PRK12381 bifunctional succinyl 99.9 6.5E-22 1.4E-26 194.5 27.3 334 71-441 38-397 (406)
184 PLN02651 cysteine desulfurase 99.9 5E-22 1.1E-26 193.0 26.2 317 85-431 10-364 (364)
185 TIGR01437 selA_rel uncharacter 99.9 1.5E-21 3.3E-26 188.6 29.3 298 85-441 24-363 (363)
186 PRK08045 cystathionine gamma-s 99.9 7.9E-22 1.7E-26 191.4 27.2 220 107-368 46-269 (386)
187 PLN02955 8-amino-7-oxononanoat 99.9 1.3E-21 2.7E-26 190.2 28.1 332 72-440 102-458 (476)
188 PRK07505 hypothetical protein; 99.9 9.9E-22 2.1E-26 193.4 27.0 332 71-441 45-397 (402)
189 PRK06767 methionine gamma-lyas 99.9 1.1E-21 2.3E-26 191.2 26.6 259 107-409 55-332 (386)
190 PRK00854 rocD ornithine--oxo-a 99.9 2.2E-21 4.8E-26 191.0 27.9 333 71-441 40-399 (401)
191 PTZ00125 ornithine aminotransf 99.9 9.8E-22 2.1E-26 193.6 25.2 337 71-441 30-393 (400)
192 PRK08776 cystathionine gamma-s 99.9 2.4E-21 5.2E-26 189.1 26.0 212 114-368 60-277 (405)
193 cd00614 CGS_like CGS_like: Cys 99.9 6.4E-21 1.4E-25 185.1 27.7 246 112-403 38-308 (369)
194 PRK04366 glycine dehydrogenase 99.9 7.9E-21 1.7E-25 189.9 28.6 353 56-440 52-445 (481)
195 PLN00144 acetylornithine trans 99.9 9E-21 2E-25 184.4 27.3 332 71-441 14-378 (382)
196 PRK08861 cystathionine gamma-s 99.9 1.4E-20 3E-25 182.1 27.6 219 107-368 47-270 (388)
197 PRK07504 O-succinylhomoserine 99.9 7.1E-21 1.5E-25 185.8 25.4 217 108-370 60-285 (398)
198 TIGR01325 O_suc_HS_sulf O-succ 99.9 2E-20 4.4E-25 181.9 28.3 216 108-368 49-270 (380)
199 PRK08249 cystathionine gamma-s 99.9 1.2E-20 2.7E-25 183.8 26.5 213 112-368 62-280 (398)
200 PRK05937 8-amino-7-oxononanoat 99.9 1.2E-20 2.6E-25 183.5 26.3 323 72-440 4-347 (370)
201 PRK07050 cystathionine beta-ly 99.9 1.9E-20 4.2E-25 182.4 26.6 218 107-368 59-282 (394)
202 PF00266 Aminotran_5: Aminotra 99.9 2.2E-20 4.7E-25 182.1 26.9 323 85-433 10-371 (371)
203 PRK07811 cystathionine gamma-s 99.9 3.9E-20 8.4E-25 180.2 27.9 217 112-368 59-278 (388)
204 PRK07810 O-succinylhomoserine 99.9 6E-20 1.3E-24 179.3 28.2 218 107-368 64-287 (403)
205 PRK07503 methionine gamma-lyas 99.9 3.4E-20 7.4E-25 181.4 25.8 212 113-368 64-283 (403)
206 PRK09028 cystathionine beta-ly 99.9 3.1E-20 6.7E-25 179.5 24.9 216 109-368 54-277 (394)
207 TIGR01814 kynureninase kynuren 99.9 8.8E-20 1.9E-24 179.8 28.5 328 72-441 26-405 (406)
208 TIGR03246 arg_catab_astC succi 99.9 5.9E-20 1.3E-24 180.1 26.9 332 71-441 34-393 (397)
209 TIGR02379 ECA_wecE TDP-4-keto- 99.9 9.9E-20 2.1E-24 176.5 27.7 301 87-441 10-375 (376)
210 PRK06918 4-aminobutyrate amino 99.9 2E-19 4.4E-24 178.8 30.2 341 70-441 52-441 (451)
211 PRK09792 4-aminobutyrate trans 99.9 1.5E-19 3.3E-24 177.9 28.7 343 70-441 38-419 (421)
212 TIGR00700 GABAtrnsam 4-aminobu 99.9 2.6E-19 5.6E-24 176.7 30.1 340 70-441 31-418 (420)
213 PRK08574 cystathionine gamma-s 99.9 9.1E-20 2E-24 177.1 26.3 215 113-368 52-269 (385)
214 PF04864 Alliinase_C: Allinase 99.9 1.3E-20 2.8E-25 170.6 17.2 325 75-440 1-362 (363)
215 TIGR01328 met_gam_lyase methio 99.9 9.7E-20 2.1E-24 177.4 24.7 217 107-368 53-277 (391)
216 TIGR01329 cysta_beta_ly_E cyst 99.9 1.6E-19 3.5E-24 175.3 25.7 266 116-425 49-359 (378)
217 PRK07269 cystathionine gamma-s 99.9 1.1E-19 2.3E-24 175.2 24.2 238 107-386 48-288 (364)
218 PRK06777 4-aminobutyrate amino 99.9 5.7E-19 1.2E-23 173.9 29.0 344 70-441 38-419 (421)
219 COG0075 Serine-pyruvate aminot 99.9 2.2E-18 4.7E-23 162.4 31.1 324 83-441 13-361 (383)
220 PRK05968 hypothetical protein; 99.9 6.6E-19 1.4E-23 171.6 28.7 280 114-439 63-386 (389)
221 PRK08064 cystathionine beta-ly 99.9 6E-19 1.3E-23 172.0 28.0 280 114-439 54-382 (390)
222 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 5.2E-19 1.1E-23 174.0 27.4 164 108-303 52-220 (418)
223 PLN02624 ornithine-delta-amino 99.8 2.2E-19 4.9E-24 179.0 24.8 340 70-441 73-442 (474)
224 TIGR01885 Orn_aminotrans ornit 99.8 2.9E-19 6.3E-24 175.8 25.2 339 71-441 36-400 (401)
225 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.1E-18 2.4E-23 169.8 28.9 305 88-441 11-374 (375)
226 PLN02509 cystathionine beta-ly 99.8 6.7E-19 1.5E-23 173.2 27.2 219 107-368 124-349 (464)
227 PRK08360 4-aminobutyrate amino 99.8 4.9E-18 1.1E-22 167.8 33.1 342 70-441 39-424 (443)
228 PRK07671 cystathionine beta-ly 99.8 1.1E-18 2.3E-23 169.4 27.2 216 113-368 49-266 (377)
229 TIGR01324 cysta_beta_ly_B cyst 99.8 1E-18 2.2E-23 169.1 26.9 207 116-368 52-266 (377)
230 PRK04612 argD acetylornithine 99.8 1.5E-18 3.1E-23 169.9 27.3 336 70-441 38-401 (408)
231 PRK08248 O-acetylhomoserine am 99.8 1.1E-18 2.5E-23 171.4 25.4 220 113-368 63-313 (431)
232 PRK00062 glutamate-1-semialdeh 99.8 8.6E-19 1.9E-23 173.2 23.9 341 70-441 48-422 (426)
233 PRK05939 hypothetical protein; 99.8 2.5E-18 5.5E-23 167.4 26.3 216 117-368 50-284 (397)
234 cd00616 AHBA_syn 3-amino-5-hyd 99.8 3.5E-18 7.5E-23 165.5 27.2 278 113-438 17-352 (352)
235 PRK11658 UDP-4-amino-4-deoxy-L 99.8 5.7E-18 1.2E-22 164.9 28.3 303 87-440 13-376 (379)
236 PRK07495 4-aminobutyrate amino 99.8 1.2E-17 2.7E-22 164.2 30.2 338 70-441 38-419 (425)
237 PLN02724 Molybdenum cofactor s 99.8 4.5E-18 9.9E-23 179.8 28.9 343 73-440 34-485 (805)
238 KOG1549 Cysteine desulfurase N 99.8 4E-18 8.6E-23 159.9 24.5 205 70-302 40-257 (428)
239 PRK06176 cystathionine gamma-s 99.8 5.6E-18 1.2E-22 164.3 25.8 214 115-368 51-266 (380)
240 PRK08117 4-aminobutyrate amino 99.8 3E-17 6.4E-22 162.8 30.1 341 70-441 41-427 (433)
241 cd00611 PSAT_like Phosphoserin 99.8 6.5E-18 1.4E-22 163.2 24.6 314 83-440 7-353 (355)
242 TIGR01364 serC_1 phosphoserine 99.8 2E-17 4.4E-22 158.6 27.7 317 86-440 3-345 (349)
243 KOG1359 Glycine C-acetyltransf 99.8 1.7E-18 3.7E-23 152.0 18.3 361 28-440 34-409 (417)
244 PRK06084 O-acetylhomoserine am 99.8 7.9E-18 1.7E-22 165.3 25.3 221 113-368 57-308 (425)
245 cd00615 Orn_deC_like Ornithine 99.8 1E-18 2.3E-23 164.4 17.4 165 112-303 57-236 (294)
246 PRK05967 cystathionine beta-ly 99.8 1.7E-17 3.6E-22 160.2 25.5 214 115-368 61-280 (395)
247 PRK13580 serine hydroxymethylt 99.8 1.8E-17 3.9E-22 161.5 25.7 342 73-440 50-442 (493)
248 TIGR02407 ectoine_ectB diamino 99.8 6.7E-17 1.5E-21 158.8 28.7 343 71-441 34-410 (412)
249 PRK06702 O-acetylhomoserine am 99.8 3.6E-17 7.8E-22 159.6 26.5 217 114-368 61-310 (432)
250 TIGR03588 PseC UDP-4-keto-6-de 99.8 5.9E-17 1.3E-21 158.4 28.1 303 87-441 9-380 (380)
251 PRK13034 serine hydroxymethylt 99.8 8.4E-17 1.8E-21 158.3 29.1 332 73-441 29-390 (416)
252 PRK06058 4-aminobutyrate amino 99.8 2E-16 4.2E-21 157.0 29.8 340 70-441 54-440 (443)
253 PTZ00094 serine hydroxymethylt 99.8 1.5E-16 3.3E-21 158.4 28.3 345 73-441 35-406 (452)
254 KOG1412 Aspartate aminotransfe 99.8 1.2E-16 2.6E-21 141.6 21.6 318 71-407 29-378 (410)
255 PRK03080 phosphoserine aminotr 99.8 2E-16 4.4E-21 154.0 25.7 318 75-440 14-370 (378)
256 KOG1411 Aspartate aminotransfe 99.8 7.1E-18 1.5E-22 151.3 14.0 325 67-407 47-398 (427)
257 COG4992 ArgD Ornithine/acetylo 99.8 2.3E-16 5E-21 147.3 24.3 334 70-441 40-396 (404)
258 PRK05355 3-phosphoserine/phosp 99.8 6.7E-16 1.4E-20 148.9 28.5 321 83-441 11-356 (360)
259 COG2008 GLY1 Threonine aldolas 99.8 3.2E-16 7E-21 143.5 24.3 310 85-441 11-341 (342)
260 PRK09264 diaminobutyrate--2-ox 99.8 3.3E-16 7.1E-21 154.7 25.7 344 71-441 38-414 (425)
261 PRK05994 O-acetylhomoserine am 99.7 7.7E-16 1.7E-20 151.7 27.0 218 115-368 64-312 (427)
262 PRK05964 adenosylmethionine--8 99.7 1E-15 2.2E-20 151.4 27.4 341 70-441 40-420 (423)
263 cd01494 AAT_I Aspartate aminot 99.7 7.8E-17 1.7E-21 138.8 16.4 160 117-301 3-170 (170)
264 TIGR03531 selenium_SpcS O-phos 99.7 1.8E-15 3.8E-20 147.5 27.2 296 116-441 103-444 (444)
265 PRK08134 O-acetylhomoserine am 99.7 9.4E-16 2E-20 150.8 25.4 156 114-300 64-224 (433)
266 KOG1360 5-aminolevulinate synt 99.7 7.7E-16 1.7E-20 140.8 22.7 336 72-439 171-520 (570)
267 PRK07812 O-acetylhomoserine am 99.7 3.2E-15 7E-20 146.8 27.6 221 114-368 69-317 (436)
268 TIGR00709 dat 2,4-diaminobutyr 99.7 2.4E-15 5.1E-20 149.1 26.9 341 70-441 37-433 (442)
269 PRK15407 lipopolysaccharide bi 99.7 6.7E-15 1.5E-19 145.2 29.7 192 74-305 25-238 (438)
270 PRK06541 hypothetical protein; 99.7 8.3E-15 1.8E-19 145.5 29.9 341 70-441 50-453 (460)
271 PRK08114 cystathionine beta-ly 99.7 2.5E-15 5.5E-20 145.0 25.3 211 114-368 62-280 (395)
272 PRK03715 argD acetylornithine 99.7 5.7E-15 1.2E-19 144.2 27.2 333 71-441 35-391 (395)
273 KOG1368 Threonine aldolase [Am 99.7 2.5E-15 5.5E-20 132.6 21.8 321 74-439 23-364 (384)
274 TIGR03372 putres_am_tran putre 99.7 7.8E-15 1.7E-19 144.4 27.7 339 70-441 73-442 (442)
275 PLN03226 serine hydroxymethylt 99.7 9.9E-15 2.2E-19 144.9 27.7 349 73-441 35-417 (475)
276 PRK06434 cystathionine gamma-l 99.7 1.3E-14 2.8E-19 140.2 27.8 239 113-400 63-319 (384)
277 PRK02769 histidine decarboxyla 99.7 1.4E-14 3E-19 140.1 27.8 291 115-440 62-369 (380)
278 PLN02271 serine hydroxymethylt 99.7 1.4E-14 3.1E-19 141.8 27.4 344 73-440 149-537 (586)
279 PLN02414 glycine dehydrogenase 99.7 5.1E-15 1.1E-19 156.0 25.6 299 114-440 564-904 (993)
280 PRK08593 4-aminobutyrate amino 99.7 4.5E-14 9.8E-19 139.9 31.1 340 70-441 40-427 (445)
281 TIGR01366 serC_3 phosphoserine 99.7 1.2E-14 2.6E-19 140.5 26.0 315 84-440 12-357 (361)
282 PRK11522 putrescine--2-oxoglut 99.7 1.1E-14 2.3E-19 144.4 25.4 342 70-441 80-449 (459)
283 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 5.5E-15 1.2E-19 142.4 22.4 214 115-368 56-274 (386)
284 COG0626 MetC Cystathionine bet 99.7 2E-14 4.2E-19 136.8 25.4 217 113-368 62-282 (396)
285 COG0399 WecE Predicted pyridox 99.7 9.7E-14 2.1E-18 131.3 29.7 303 88-441 15-371 (374)
286 COG0160 GabT 4-aminobutyrate a 99.7 6.3E-14 1.4E-18 135.0 28.5 341 69-441 53-443 (447)
287 COG0112 GlyA Glycine/serine hy 99.7 3.2E-14 6.9E-19 131.2 25.0 338 73-441 27-388 (413)
288 TIGR01788 Glu-decarb-GAD gluta 99.7 5.9E-14 1.3E-18 137.6 27.0 323 85-440 52-426 (431)
289 PRK05613 O-acetylhomoserine am 99.7 4.3E-14 9.4E-19 138.9 26.0 217 115-368 70-322 (437)
290 COG0001 HemL Glutamate-1-semia 99.7 3.1E-14 6.8E-19 134.6 23.0 336 69-440 50-425 (432)
291 PRK05769 4-aminobutyrate amino 99.7 3.2E-13 6.9E-18 133.7 30.8 337 70-441 52-437 (441)
292 TIGR02618 tyr_phenol_ly tyrosi 99.6 3.7E-13 8E-18 129.6 29.4 297 109-439 66-422 (450)
293 PLN02452 phosphoserine transam 99.6 8.4E-13 1.8E-17 126.8 29.8 328 73-440 7-360 (365)
294 PLN03032 serine decarboxylase; 99.6 3.3E-13 7.1E-18 129.6 26.6 315 88-440 37-373 (374)
295 PRK04311 selenocysteine syntha 99.6 7.7E-13 1.7E-17 130.5 28.9 315 85-441 97-462 (464)
296 PLN02414 glycine dehydrogenase 99.6 7.6E-13 1.6E-17 139.8 30.4 341 55-439 87-465 (993)
297 PRK07678 aminotransferase; Val 99.6 1.1E-12 2.4E-17 130.2 29.8 343 70-441 45-447 (451)
298 PRK05639 4-aminobutyrate amino 99.6 2.4E-12 5.2E-17 127.7 31.5 340 70-441 51-441 (457)
299 PLN02482 glutamate-1-semialdeh 99.6 5.2E-13 1.1E-17 132.5 26.0 338 69-441 96-471 (474)
300 PRK13237 tyrosine phenol-lyase 99.6 2.2E-12 4.9E-17 124.6 29.4 293 109-439 73-429 (460)
301 PRK04013 argD acetylornithine/ 99.6 1.1E-12 2.3E-17 126.3 27.2 324 71-441 23-358 (364)
302 PRK05965 hypothetical protein; 99.6 1.1E-12 2.4E-17 130.4 28.2 340 70-441 44-445 (459)
303 PF01041 DegT_DnrJ_EryC1: DegT 99.6 1.1E-13 2.5E-18 134.1 20.6 299 88-438 5-363 (363)
304 PF00464 SHMT: Serine hydroxym 99.6 1.6E-13 3.4E-18 131.2 21.0 344 73-436 21-398 (399)
305 PRK05367 glycine dehydrogenase 99.6 1.8E-12 3.9E-17 137.5 31.1 341 53-438 58-437 (954)
306 PRK00615 glutamate-1-semialdeh 99.6 5E-13 1.1E-17 131.6 24.5 339 69-441 50-426 (433)
307 PRK06082 4-aminobutyrate amino 99.6 1.5E-12 3.2E-17 129.5 27.7 338 70-441 70-449 (459)
308 PRK07482 hypothetical protein; 99.6 1.6E-12 3.4E-17 129.4 27.8 341 70-441 48-452 (461)
309 PRK06943 adenosylmethionine--8 99.6 8.7E-13 1.9E-17 130.9 25.8 337 70-441 52-444 (453)
310 PRK09221 beta alanine--pyruvat 99.6 1.8E-12 4E-17 128.4 27.6 337 70-441 47-441 (445)
311 PLN02760 4-aminobutyrate:pyruv 99.6 2.3E-12 5E-17 129.1 28.4 339 70-441 87-489 (504)
312 PRK12389 glutamate-1-semialdeh 99.6 1.5E-12 3.2E-17 128.8 26.7 335 70-441 51-425 (428)
313 PRK06173 adenosylmethionine--8 99.6 6.7E-13 1.4E-17 130.7 24.0 338 70-441 42-423 (429)
314 PRK12462 phosphoserine aminotr 99.6 4.2E-12 9.2E-17 120.6 28.3 327 74-440 5-359 (364)
315 PLN02880 tyrosine decarboxylas 99.6 3.5E-12 7.5E-17 127.5 29.2 308 109-440 113-481 (490)
316 PRK06062 hypothetical protein; 99.6 5E-12 1.1E-16 125.5 29.9 338 70-441 51-443 (451)
317 PRK07986 adenosylmethionine--8 99.6 8.7E-13 1.9E-17 129.8 24.1 337 70-441 41-421 (428)
318 PRK13360 omega amino acid--pyr 99.6 4.9E-12 1.1E-16 125.2 29.5 340 71-441 45-438 (442)
319 PRK06917 hypothetical protein; 99.6 1.2E-11 2.6E-16 122.6 32.1 348 70-441 29-435 (447)
320 KOG2862 Alanine-glyoxylate ami 99.6 3.1E-12 6.6E-17 114.0 24.4 319 86-441 28-380 (385)
321 PRK06105 aminotransferase; Pro 99.6 5.7E-12 1.2E-16 125.4 29.2 342 70-441 46-447 (460)
322 PRK06916 adenosylmethionine--8 99.6 3E-12 6.5E-17 127.4 27.1 340 70-441 54-453 (460)
323 PRK07046 aminotransferase; Val 99.6 4.3E-12 9.3E-17 125.8 28.0 334 69-441 72-448 (453)
324 PRK07036 hypothetical protein; 99.6 9.5E-12 2.1E-16 123.9 30.4 342 70-441 49-450 (466)
325 PRK07483 hypothetical protein; 99.6 1.3E-11 2.7E-16 122.4 31.0 344 70-441 28-435 (443)
326 TIGR00474 selA seryl-tRNA(sec) 99.5 4E-12 8.8E-17 125.1 27.0 313 85-437 92-453 (454)
327 TIGR00508 bioA adenosylmethion 99.5 2.5E-12 5.4E-17 126.9 25.4 341 70-441 43-424 (427)
328 KOG0053 Cystathionine beta-lya 99.5 2.1E-12 4.6E-17 121.4 23.1 214 115-368 78-294 (409)
329 PRK15029 arginine decarboxylas 99.5 2.7E-12 5.7E-17 132.1 25.9 170 112-303 202-402 (755)
330 PRK07030 adenosylmethionine--8 99.5 7.9E-12 1.7E-16 124.4 28.7 340 70-441 45-444 (466)
331 PF01276 OKR_DC_1: Orn/Lys/Arg 99.5 3E-14 6.5E-19 136.7 10.9 171 112-304 63-257 (417)
332 PRK08742 adenosylmethionine--8 99.5 1E-11 2.3E-16 123.5 29.1 340 70-441 62-465 (472)
333 TIGR01365 serC_2 phosphoserine 99.5 4.9E-12 1.1E-16 121.6 25.7 309 88-438 17-368 (374)
334 PRK07481 hypothetical protein; 99.5 1.3E-11 2.8E-16 122.6 29.4 341 71-441 41-443 (449)
335 PRK05630 adenosylmethionine--8 99.5 3.6E-12 7.7E-17 125.5 25.1 337 70-441 38-418 (422)
336 PRK07480 putative aminotransfe 99.5 6.4E-12 1.4E-16 124.8 26.9 341 70-441 48-446 (456)
337 KOG1357 Serine palmitoyltransf 99.5 2E-13 4.2E-18 127.3 13.3 321 84-439 154-498 (519)
338 PLN02590 probable tyrosine dec 99.5 2.3E-11 4.9E-16 121.8 29.1 330 88-440 145-529 (539)
339 PRK06149 hypothetical protein; 99.5 2E-11 4.4E-16 131.9 30.4 339 70-441 583-968 (972)
340 PRK06931 diaminobutyrate--2-ox 99.5 5.1E-11 1.1E-15 118.5 30.9 343 70-441 56-452 (459)
341 PRK12403 putative aminotransfe 99.5 2E-11 4.4E-16 121.5 27.8 341 70-441 52-450 (460)
342 PRK06938 diaminobutyrate--2-ox 99.5 5E-11 1.1E-15 118.6 30.2 343 70-441 61-458 (464)
343 TIGR00699 GABAtrns_euk 4-amino 99.5 8E-12 1.7E-16 123.4 24.1 340 70-441 56-464 (464)
344 PRK13578 ornithine decarboxyla 99.5 3.1E-11 6.8E-16 123.1 27.8 175 107-304 166-372 (720)
345 PRK06148 hypothetical protein; 99.5 3.6E-11 7.8E-16 130.1 29.4 338 71-441 623-1008(1013)
346 TIGR00461 gcvP glycine dehydro 99.5 9.2E-11 2E-15 122.7 29.3 306 107-440 516-864 (939)
347 PF01212 Beta_elim_lyase: Beta 99.4 5.1E-14 1.1E-18 130.7 4.3 256 86-379 7-281 (290)
348 PRK05367 glycine dehydrogenase 99.4 1.2E-10 2.6E-15 123.8 30.2 335 72-440 499-872 (954)
349 PRK15400 lysine decarboxylase 99.4 2.1E-11 4.5E-16 124.3 22.8 167 112-302 192-382 (714)
350 TIGR03799 NOD_PanD_pyr putativ 99.4 2E-10 4.4E-15 115.2 28.8 313 108-436 119-518 (522)
351 COG2873 MET17 O-acetylhomoseri 99.4 3.8E-11 8.3E-16 110.0 21.2 158 114-302 62-224 (426)
352 PRK08297 L-lysine aminotransfe 99.4 1E-10 2.2E-15 115.9 26.2 340 71-441 44-439 (443)
353 PLN02263 serine decarboxylase 99.4 1.7E-09 3.8E-14 105.7 32.9 315 88-440 105-440 (470)
354 PRK12566 glycine dehydrogenase 99.4 5.4E-11 1.2E-15 123.7 22.6 306 108-440 530-873 (954)
355 PRK15399 lysine decarboxylase 99.4 4.6E-10 1E-14 114.5 28.9 151 131-303 208-383 (713)
356 COG1103 Archaea-specific pyrid 99.4 6.8E-10 1.5E-14 97.4 25.6 276 116-440 63-377 (382)
357 KOG1404 Alanine-glyoxylate ami 99.4 1.5E-10 3.3E-15 106.6 21.9 326 85-437 66-432 (442)
358 COG3844 Kynureninase [Amino ac 99.4 3E-10 6.6E-15 102.2 23.3 332 72-441 30-400 (407)
359 KOG1358 Serine palmitoyltransf 99.4 7.2E-11 1.6E-15 108.5 19.7 337 71-440 93-462 (467)
360 TIGR03251 LAT_fam L-lysine 6-t 99.4 1.6E-09 3.5E-14 107.3 30.2 338 72-440 38-431 (431)
361 COG0161 BioA Adenosylmethionin 99.3 6.9E-10 1.5E-14 106.7 24.1 328 86-441 61-441 (449)
362 COG0076 GadB Glutamate decarbo 99.3 1.2E-09 2.6E-14 107.7 26.4 278 85-387 73-381 (460)
363 PRK06209 glutamate-1-semialdeh 99.3 1.7E-10 3.7E-15 114.2 20.6 324 70-441 46-403 (431)
364 PLN02974 adenosylmethionine-8- 99.3 7.2E-09 1.6E-13 108.6 30.3 206 214-441 584-816 (817)
365 PLN02994 1-aminocyclopropane-1 99.3 1.1E-11 2.4E-16 103.4 6.5 62 109-170 87-153 (153)
366 PF06838 Met_gamma_lyase: Meth 99.2 1.7E-10 3.6E-15 106.1 14.5 269 88-386 27-318 (403)
367 COG1982 LdcC Arginine/lysine/o 99.2 3.4E-09 7.4E-14 104.1 23.0 232 113-374 68-319 (557)
368 PF00202 Aminotran_3: Aminotra 99.2 7.6E-11 1.6E-15 113.0 11.4 274 71-367 15-315 (339)
369 TIGR00461 gcvP glycine dehydro 99.2 1.5E-08 3.2E-13 106.5 27.7 337 55-438 48-426 (939)
370 KOG1401 Acetylornithine aminot 99.2 9.1E-09 2E-13 95.7 22.6 275 69-368 53-352 (433)
371 TIGR02617 tnaA_trp_ase tryptop 99.1 4.4E-08 9.5E-13 94.0 25.6 323 73-439 42-437 (467)
372 PF02347 GDC-P: Glycine cleava 99.1 1.3E-08 2.9E-13 98.0 22.2 342 57-437 51-429 (429)
373 KOG1402 Ornithine aminotransfe 99.1 2.1E-08 4.6E-13 90.5 18.6 320 85-441 75-425 (427)
374 PF00282 Pyridoxal_deC: Pyrido 99.0 1.5E-08 3.2E-13 98.1 17.9 272 90-385 56-372 (373)
375 KOG2467 Glycine/serine hydroxy 98.9 6.3E-07 1.4E-11 82.3 23.4 339 86-440 52-423 (477)
376 COG4100 Cystathionine beta-lya 98.8 2.1E-07 4.6E-12 83.1 16.3 184 106-305 56-253 (416)
377 COG0403 GcvP Glycine cleavage 98.8 2.1E-05 4.5E-10 74.3 29.3 348 55-440 59-447 (450)
378 COG1921 SelA Selenocysteine sy 98.7 1.5E-06 3.2E-11 82.1 18.4 192 85-305 38-240 (395)
379 COG1932 SerC Phosphoserine ami 98.7 1.8E-05 3.9E-10 73.4 24.0 328 73-440 5-360 (365)
380 COG1003 GcvP Glycine cleavage 98.6 7.7E-06 1.7E-10 77.2 20.8 303 113-440 104-444 (496)
381 PRK12566 glycine dehydrogenase 98.6 7.9E-05 1.7E-09 78.6 28.9 341 53-438 61-439 (954)
382 COG3033 TnaA Tryptophanase [Am 98.4 0.00017 3.7E-09 66.6 23.3 329 74-439 48-440 (471)
383 PF03841 SelA: L-seryl-tRNA se 98.4 5.2E-07 1.1E-11 84.4 7.4 252 85-368 17-296 (367)
384 TIGR03811 tyr_de_CO2_Ent tyros 98.4 0.00026 5.6E-09 72.4 26.4 267 108-385 113-501 (608)
385 KOG1383 Glutamate decarboxylas 98.3 5.6E-05 1.2E-09 72.1 18.2 295 87-405 93-410 (491)
386 KOG1403 Predicted alanine-glyo 98.2 0.0017 3.7E-08 58.6 22.8 199 222-440 217-434 (452)
387 KOG1405 4-aminobutyrate aminot 98.1 0.00025 5.4E-09 65.3 16.6 197 215-440 271-480 (484)
388 PF05889 SLA_LP_auto_ag: Solub 97.9 0.0017 3.7E-08 61.7 19.5 284 131-441 69-388 (389)
389 KOG3846 L-kynurenine hydrolase 97.7 0.007 1.5E-07 55.0 18.4 335 71-440 65-458 (465)
390 KOG0629 Glutamate decarboxylas 97.5 0.0057 1.2E-07 58.1 16.3 287 130-440 155-506 (510)
391 COG1725 Predicted transcriptio 97.5 2.7E-05 5.9E-10 61.6 0.7 33 7-43 44-78 (125)
392 KOG2040 Glycine dehydrogenase 97.3 0.026 5.6E-07 56.5 18.4 317 77-438 123-478 (1001)
393 KOG2790 Phosphoserine aminotra 97.1 0.14 3E-06 46.3 18.9 324 72-440 6-365 (370)
394 PLN02672 methionine S-methyltr 97.0 0.011 2.4E-07 64.2 13.3 227 90-333 406-640 (1082)
395 KOG0628 Aromatic-L-amino-acid/ 97.0 0.11 2.4E-06 50.2 18.4 308 110-440 105-468 (511)
396 PRK10079 phosphonate metabolis 96.5 0.00092 2E-08 60.9 1.2 31 13-43 46-78 (241)
397 TIGR02325 C_P_lyase_phnF phosp 96.4 0.0022 4.7E-08 58.4 2.8 31 13-43 43-75 (238)
398 TIGR02404 trehalos_R_Bsub treh 96.4 0.0013 2.8E-08 59.6 1.2 30 13-42 35-66 (233)
399 PRK14999 histidine utilization 96.3 0.0016 3.5E-08 59.3 1.2 30 13-42 47-78 (241)
400 PRK11402 DNA-binding transcrip 96.3 0.0016 3.6E-08 59.3 1.2 31 13-43 44-76 (241)
401 COG2188 PhnF Transcriptional r 96.2 0.0017 3.7E-08 58.8 1.1 29 15-43 44-74 (236)
402 PF00392 GntR: Bacterial regul 96.2 0.0019 4.1E-08 45.3 0.9 27 14-40 36-64 (64)
403 TIGR02018 his_ut_repres histid 96.1 0.0021 4.5E-08 58.1 1.2 30 13-42 36-67 (230)
404 KOG2040 Glycine dehydrogenase 96.1 0.64 1.4E-05 47.0 18.0 297 113-438 577-913 (1001)
405 PRK09764 DNA-binding transcrip 95.8 0.0038 8.3E-08 56.8 1.2 31 13-43 40-72 (240)
406 TIGR03337 phnR transcriptional 93.5 0.055 1.2E-06 48.9 2.8 31 13-43 36-68 (231)
407 PRK04984 fatty acid metabolism 93.3 0.036 7.7E-07 50.4 1.3 30 13-42 42-73 (239)
408 smart00345 HTH_GNTR helix_turn 93.2 0.042 9E-07 37.6 1.2 26 15-40 33-60 (60)
409 PF14502 HTH_41: Helix-turn-he 93.1 0.066 1.4E-06 34.4 1.8 27 14-40 18-48 (48)
410 KOG3843 Predicted serine hydro 92.6 1.1 2.3E-05 40.3 9.2 60 231-291 171-230 (432)
411 PRK10225 DNA-binding transcrip 91.2 0.092 2E-06 48.3 1.1 30 13-42 44-75 (257)
412 COG2186 FadR Transcriptional r 91.1 0.11 2.5E-06 47.1 1.7 30 13-42 45-76 (241)
413 TIGR02812 fadR_gamma fatty aci 90.9 0.11 2.4E-06 47.1 1.3 30 13-42 41-72 (235)
414 TIGR03338 phnR_burk phosphonat 90.6 0.13 2.9E-06 45.6 1.6 30 13-42 45-76 (212)
415 PRK09464 pdhR transcriptional 90.5 0.12 2.6E-06 47.4 1.2 30 13-42 45-76 (254)
416 PRK11523 DNA-binding transcrip 90.3 0.13 2.7E-06 47.3 1.2 30 13-42 43-74 (253)
417 PRK09990 DNA-binding transcrip 90.0 0.14 3E-06 46.9 1.2 30 13-42 42-73 (251)
418 PRK10421 DNA-binding transcrip 89.9 0.14 3E-06 47.0 1.2 30 13-42 37-68 (253)
419 PRK03837 transcriptional regul 89.4 0.17 3.7E-06 46.0 1.3 30 13-42 48-79 (241)
420 TIGR01470 cysG_Nterm siroheme 88.7 6.3 0.00014 34.8 10.7 101 133-260 7-109 (205)
421 TIGR01610 phage_O_Nterm phage 87.2 0.32 7E-06 37.0 1.3 28 13-40 58-87 (95)
422 PRK11534 DNA-binding transcrip 86.4 0.36 7.9E-06 43.3 1.5 30 13-42 41-72 (224)
423 cd07377 WHTH_GntR Winged helix 84.5 0.54 1.2E-05 32.6 1.4 27 14-40 37-65 (66)
424 PRK11414 colanic acid/biofilm 83.9 0.65 1.4E-05 41.5 1.9 30 13-42 45-76 (221)
425 PF13730 HTH_36: Helix-turn-he 82.4 0.66 1.4E-05 31.0 1.1 17 15-31 38-54 (55)
426 PF00325 Crp: Bacterial regula 78.6 1.2 2.5E-05 26.2 1.1 16 16-31 16-31 (32)
427 COG1802 GntR Transcriptional r 78.4 1.5 3.2E-05 39.5 2.2 30 13-42 50-81 (230)
428 COG1654 BirA Biotin operon rep 76.3 1.5 3.2E-05 31.9 1.3 32 8-43 29-63 (79)
429 PRK05562 precorrin-2 dehydroge 73.9 66 0.0014 28.8 12.9 100 134-260 24-125 (223)
430 COG1648 CysG Siroheme synthase 73.7 47 0.001 29.4 10.3 97 132-255 9-106 (210)
431 smart00529 HTH_DTXR Helix-turn 72.7 2.3 5E-05 32.1 1.7 28 14-41 11-40 (96)
432 PF08279 HTH_11: HTH domain; 68.9 2.2 4.7E-05 28.4 0.7 26 14-39 27-55 (55)
433 TIGR00122 birA_repr_reg BirA b 68.8 3.1 6.8E-05 29.3 1.5 31 13-43 24-56 (69)
434 COG2984 ABC-type uncharacteriz 65.4 62 0.0014 30.4 9.5 149 87-256 44-197 (322)
435 PF13241 NAD_binding_7: Putati 65.2 38 0.00083 25.9 7.2 86 132-251 4-89 (103)
436 cd00092 HTH_CRP helix_turn_hel 65.0 3.5 7.6E-05 28.5 1.2 27 14-40 37-64 (67)
437 PRK11014 transcriptional repre 64.7 3.1 6.6E-05 34.3 0.9 27 13-39 36-64 (141)
438 COG0296 GlgB 1,4-alpha-glucan 62.1 12 0.00025 38.9 4.6 44 217-263 200-243 (628)
439 PRK06718 precorrin-2 dehydroge 61.3 1.1E+02 0.0025 26.7 11.5 39 132-170 7-45 (202)
440 cd06568 GH20_SpHex_like A subg 59.9 27 0.00059 33.3 6.5 59 192-252 32-93 (329)
441 PRK10637 cysG siroheme synthas 59.1 1.2E+02 0.0027 30.4 11.3 121 132-286 9-131 (457)
442 smart00419 HTH_CRP helix_turn_ 58.1 5.1 0.00011 25.5 0.9 17 15-31 21-37 (48)
443 cd02742 GH20_hexosaminidase Be 55.2 25 0.00055 33.1 5.4 59 192-252 30-90 (303)
444 cd06563 GH20_chitobiase-like T 53.8 31 0.00068 33.3 5.9 27 226-252 78-104 (357)
445 PRK04148 hypothetical protein; 51.4 1.3E+02 0.0029 24.4 9.6 88 137-252 20-107 (134)
446 PF05732 RepL: Firmicute plasm 49.0 7.9 0.00017 32.8 0.8 28 14-41 87-115 (165)
447 PF00728 Glyco_hydro_20: Glyco 46.8 13 0.00028 35.7 2.1 59 192-251 32-90 (351)
448 cd06570 GH20_chitobiase-like_1 46.2 61 0.0013 30.7 6.4 54 192-251 32-85 (311)
449 PF01325 Fe_dep_repress: Iron 46.0 9.9 0.00022 26.0 0.8 19 13-31 33-51 (60)
450 cd06562 GH20_HexA_HexB-like Be 45.8 46 0.00099 32.1 5.7 56 192-252 32-88 (348)
451 smart00642 Aamy Alpha-amylase 45.3 26 0.00055 29.7 3.4 27 232-258 68-94 (166)
452 PF13545 HTH_Crp_2: Crp-like h 42.8 11 0.00024 26.8 0.7 19 13-31 39-57 (76)
453 COG1377 FlhB Flagellar biosynt 42.3 22 0.00048 34.0 2.8 41 213-254 261-316 (363)
454 PF13872 AAA_34: P-loop contai 41.9 18 0.0004 33.7 2.1 27 232-258 157-184 (303)
455 PF04392 ABC_sub_bind: ABC tra 40.0 98 0.0021 28.8 6.9 141 88-251 14-164 (294)
456 PRK06372 translation initiatio 39.6 90 0.002 28.5 6.2 101 136-252 87-190 (253)
457 PRK11886 bifunctional biotin-- 39.4 16 0.00034 34.8 1.4 30 13-42 29-61 (319)
458 PRK13109 flhB flagellar biosyn 37.9 22 0.00048 34.3 2.1 41 213-254 263-318 (358)
459 TIGR00789 flhB_rel flhB C-term 37.9 30 0.00065 25.4 2.3 22 236-257 29-50 (82)
460 PLN03244 alpha-amylase; Provis 37.7 52 0.0011 35.2 4.8 40 223-262 430-469 (872)
461 PRK04296 thymidine kinase; Pro 37.1 54 0.0012 28.4 4.3 42 213-259 77-118 (190)
462 KOG2741 Dimeric dihydrodiol de 36.7 29 0.00064 32.9 2.6 75 167-259 60-134 (351)
463 PF08222 HTH_CodY: CodY helix- 35.3 20 0.00044 24.0 1.0 27 16-42 18-48 (61)
464 PF00128 Alpha-amylase: Alpha 35.3 33 0.00071 31.9 2.9 27 232-258 50-76 (316)
465 PF14258 DUF4350: Domain of un 35.3 89 0.0019 21.7 4.5 34 216-253 36-70 (70)
466 PF13412 HTH_24: Winged helix- 34.9 21 0.00046 22.8 1.1 18 14-31 29-46 (48)
467 TIGR02104 pulA_typeI pullulana 34.9 44 0.00095 35.0 3.9 35 222-259 220-254 (605)
468 KOG0604 MAP kinase-activated p 34.8 12 0.00026 34.8 -0.2 91 130-240 184-280 (400)
469 PRK09108 type III secretion sy 34.4 26 0.00056 33.7 2.0 20 235-254 292-311 (353)
470 PF01047 MarR: MarR family; I 34.0 22 0.00048 23.8 1.1 16 16-31 31-46 (59)
471 smart00420 HTH_DEOR helix_turn 33.8 21 0.00045 22.9 0.9 19 13-31 25-43 (53)
472 TIGR02402 trehalose_TreZ malto 33.7 66 0.0014 33.1 4.9 29 232-260 158-186 (542)
473 COG1435 Tdk Thymidine kinase [ 33.6 67 0.0014 28.0 4.1 104 142-259 15-122 (201)
474 cd06564 GH20_DspB_LnbB-like Gl 33.5 44 0.00096 31.8 3.4 26 226-251 74-99 (326)
475 PRK12468 flhB flagellar biosyn 33.4 29 0.00062 33.9 2.1 42 213-255 261-317 (386)
476 PF12802 MarR_2: MarR family; 33.4 23 0.00049 23.9 1.1 18 14-31 33-50 (62)
477 smart00418 HTH_ARSR helix_turn 33.3 24 0.00052 23.6 1.2 18 14-31 22-39 (66)
478 PRK08156 type III secretion sy 33.1 26 0.00056 33.8 1.7 21 235-255 285-305 (361)
479 PRK06298 type III secretion sy 32.8 30 0.00064 33.4 2.1 42 213-255 255-311 (356)
480 PRK11050 manganese transport r 32.2 25 0.00055 29.2 1.4 29 13-41 62-92 (152)
481 TIGR00511 ribulose_e2b2 ribose 31.6 1.2E+02 0.0026 28.5 5.9 111 117-252 99-222 (301)
482 COG2102 Predicted ATPases of P 31.2 2.1E+02 0.0045 25.5 6.8 30 214-250 86-115 (223)
483 cd06569 GH20_Sm-chitobiase-lik 30.8 58 0.0013 32.6 3.8 26 226-251 89-114 (445)
484 PF03460 NIR_SIR_ferr: Nitrite 30.6 38 0.00082 23.6 1.9 26 222-248 13-38 (69)
485 PRK06719 precorrin-2 dehydroge 30.5 3.2E+02 0.0069 22.8 10.7 38 132-169 10-47 (157)
486 PRK08535 translation initiatio 30.1 1.4E+02 0.0029 28.3 6.0 117 118-252 105-227 (310)
487 TIGR01404 FlhB_rel_III type II 30.1 33 0.00071 33.0 1.9 21 235-255 289-309 (342)
488 TIGR00328 flhB flagellar biosy 29.5 43 0.00093 32.2 2.6 21 235-255 290-310 (347)
489 PF08672 APC2: Anaphase promot 29.4 65 0.0014 22.1 2.7 35 223-257 25-59 (60)
490 PRK09441 cytoplasmic alpha-amy 29.3 57 0.0012 33.0 3.6 28 232-259 79-106 (479)
491 PF13463 HTH_27: Winged helix 29.0 39 0.00084 23.2 1.7 18 14-31 30-47 (68)
492 TIGR00524 eIF-2B_rel eIF-2B al 28.8 1.5E+02 0.0033 27.9 6.1 120 119-253 104-237 (303)
493 COG3355 Predicted transcriptio 28.8 34 0.00074 27.4 1.5 18 14-31 54-71 (126)
494 PF01978 TrmB: Sugar-specific 28.7 31 0.00068 23.9 1.2 18 14-31 34-51 (68)
495 COG0108 RibB 3,4-dihydroxy-2-b 28.7 62 0.0013 28.2 3.1 33 217-252 158-190 (203)
496 PLN02955 8-amino-7-oxononanoat 28.0 3.5E+02 0.0076 27.4 8.7 67 109-178 111-182 (476)
497 PRK05678 succinyl-CoA syntheta 27.9 52 0.0011 30.8 2.8 39 213-257 88-126 (291)
498 COG2257 Uncharacterized homolo 27.6 41 0.00089 25.0 1.6 22 236-257 34-55 (92)
499 KOG1467 Translation initiation 27.4 3.4E+02 0.0074 27.3 8.1 130 113-257 324-472 (556)
500 PRK05702 flhB flagellar biosyn 27.3 41 0.00088 32.5 2.0 21 235-255 297-317 (359)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-61 Score=465.19 Aligned_cols=344 Identities=33% Similarity=0.532 Sum_probs=307.4
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhh--CCCCCCc-EEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKD--MGIEGDE-IFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~--~~~~~~~-I~~t~G~~~al 148 (441)
.++|+|++|+|+++.|+.+.+++.+++.+ ... +|.+..|.++||++||+++.+. ..+++++ |++|+|+++|+
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~----~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEE----GGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhc----ccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence 47999999999999999999999998875 223 6779999999999999999874 4567766 99999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCC-CCccCCCCC-----CCCccEEEEc
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPE-NNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~~-----~~~~~~v~i~ 221 (441)
.. +..+++|||+|++++|.|+.|......+| .+++.++++.+ ++|.++.+. .+++|+|++|
T Consensus 103 ~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~g------------g~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln 170 (393)
T COG0436 103 FLAFLALLNPGDEVLIPDPGYPSYEAAVKLAG------------GKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILN 170 (393)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcC------------CEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEe
Confidence 97 68889999999999999999999999999 58999998655 488887653 4689999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
+||||||.+++++++++|+++|++||++||.||+|.++.+++. +.++.++.+..+++|.++||||.++++|||+||+++
T Consensus 171 ~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~ 250 (393)
T COG0436 171 SPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVG 250 (393)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeec
Confidence 9999999999999999999999999999999999999999984 778888765568999999999999999999999999
Q ss_pred e-ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeC-CC
Q 013521 301 P-EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDG-FQALRTVIDYYKENAKIIVDAFQSL-GLKVNG-GK 376 (441)
Q Consensus 301 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~ 376 (441)
+ +.+ ++.+..++.....+++.+.|.++.++|+... ...++.+++.|++||+.+.+.|.+. |+.+.. |.
T Consensus 251 ~~~~l--------~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~ 322 (393)
T COG0436 251 PPEEL--------IAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPE 322 (393)
T ss_pred ChHHH--------HHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCC
Confidence 9 555 5666677888888899999999999999653 3567888899999999999999988 698877 67
Q ss_pred CceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCCC-CCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 377 NAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFGPG-GNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 377 ~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~-~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+++|+|++++. .++.+++.+|++++||.|.||+.|+.. +.++||||++.+.+.+++++++|+++
T Consensus 323 Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~ 388 (393)
T COG0436 323 GAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARF 388 (393)
T ss_pred eeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHH
Confidence 99999999985 688999999999999999999999985 89999999998889999999999875
No 2
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.8e-58 Score=454.81 Aligned_cols=395 Identities=49% Similarity=0.864 Sum_probs=320.9
Q ss_pred cccccCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHH
Q 013521 45 NMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIA 124 (441)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia 124 (441)
.+..+..++.|.++..+......++.++++++|+.|+|++++++.+.+++.+++.+........+|++..|..+||+++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia 86 (409)
T PRK07590 7 NYLKLKAGYLFPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIA 86 (409)
T ss_pred ccCccCCcchHHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHH
Confidence 34455555778888887777777776678999999999999899999999998876432235678988999999999999
Q ss_pred HHHhh--hCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCC
Q 013521 125 DKFYK--DMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPE 202 (441)
Q Consensus 125 ~~l~~--~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~ 202 (441)
+|+.+ ++++++++|++|+|+++++.++..++++||+|++++|+|+.+...++..|.++.. .....+.+++.++++.+
T Consensus 87 ~~~~~~~g~~~~~~~I~it~Ga~~al~~l~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~-~~~~~~~~~~~v~~~~~ 165 (409)
T PRK07590 87 ENDYQARGCDISADEIFISDGAKCDTGNILDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEA-NEDGRYSGIVYLPCTAE 165 (409)
T ss_pred HHHHHhcCCcCChhhEEECCCHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCcccc-cccccccceeEeecccc
Confidence 99864 6788999999999999999987777899999999999999999999999954221 11111124889998766
Q ss_pred CCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEE
Q 013521 203 NNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEI 281 (441)
Q Consensus 203 ~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i 281 (441)
+++.+++.. +++|++++||||||||.+||.+++++|+++|++||++||+||+|.+|.+++. +.++..++...+++|++
T Consensus 166 ~~~~~d~~~-~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~ 244 (409)
T PRK07590 166 NNFVPELPE-EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEF 244 (409)
T ss_pred cCCcccCcc-cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEE
Confidence 677777654 6899999999999999999999999999999999999999999999887653 45666665445689999
Q ss_pred ecCCcccCCccceeEEEEeeccccccC----CchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Q 013521 282 SSFSKFAGFTGVRLGWTVVPEELRYSN----GYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKEN 357 (441)
Q Consensus 282 ~S~SK~~~~~G~r~G~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 357 (441)
+||||.+|+||+|+||+++|++++..- .......+.......+.+++.+.|.++.+++.+.+..|++++++.++++
T Consensus 245 ~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 324 (409)
T PRK07590 245 RSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMEN 324 (409)
T ss_pred ecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 999999999999999999998885210 0000011222223334457889999998888765567899999999999
Q ss_pred HHHHHHHHHhCCCeeeCCCCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHH
Q 013521 358 AKIIVDAFQSLGLKVNGGKNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRR 436 (441)
Q Consensus 358 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~ 436 (441)
++.+.+.|+++|+.+.++.+|+|+|++++. .++.+++..+++++||.+.||+.|+..+.+++||+++.+++++++++++
T Consensus 325 r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~r 404 (409)
T PRK07590 325 AKIIREGLESAGFEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMER 404 (409)
T ss_pred HHHHHHHHHhcCCceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHH
Confidence 999999999988888877899999999984 4567788888888899999999998766789999987789999999999
Q ss_pred HHhhC
Q 013521 437 LKNFL 441 (441)
Q Consensus 437 l~~~l 441 (441)
|++++
T Consensus 405 l~~~~ 409 (409)
T PRK07590 405 IKKAL 409 (409)
T ss_pred HHhhC
Confidence 99875
No 3
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.3e-56 Score=440.74 Aligned_cols=397 Identities=53% Similarity=0.926 Sum_probs=318.1
Q ss_pred cccccccCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHH
Q 013521 43 NVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTA 122 (441)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 122 (441)
|+....+.++++|..+.........+.++.++++|+.|+|+.++++.+.+++.+.+.+........+|++..|.++||++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~a 83 (402)
T TIGR03542 4 NPHFLKLKSSYLFSEINRRVNEFRKKHPSADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREA 83 (402)
T ss_pred CCCccccCcchHHHHHHHHHHHHHhccCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHH
Confidence 44445555556777777777766655566789999999999988999999999988764321234579888999999999
Q ss_pred HHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCC
Q 013521 123 IADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPE 202 (441)
Q Consensus 123 ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~ 202 (441)
+|+++.+. ++++++|++|+|+++++.++..++.+||+|++++|+|+.+...++..|..|..... ..+.+++.++.+.+
T Consensus 84 ia~~~~~~-~~~~d~I~it~Ga~~al~~l~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~v~~~~~ 161 (402)
T TIGR03542 84 IAENDYRG-RIDPEEIFISDGAKCDVFRLQSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDD-GRYSKITYLPCTKE 161 (402)
T ss_pred HHHHHHhc-CCCHHHEEECCCcHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccc-cccceEEEeecchh
Confidence 99987542 48999999999999999987777899999999999999999999999953322111 11127888888766
Q ss_pred CCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEE
Q 013521 203 NNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEI 281 (441)
Q Consensus 203 ~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i 281 (441)
+++.+++....++++|++||||||||.++|.+++++|+++|++|+++||+||+|.+|.+++. +.++..+++..+++|++
T Consensus 162 ~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~ 241 (402)
T TIGR03542 162 NNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEF 241 (402)
T ss_pred hCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEE
Confidence 67777765556899999999999999999999999999999999999999999999987653 45565665445789999
Q ss_pred ecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Q 013521 282 SSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKII 361 (441)
Q Consensus 282 ~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 361 (441)
+||||.||+||+|+||+++|++++........+.+.........+++.+.|.++.+++.+..+.++.+.++.++++++.+
T Consensus 242 ~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 321 (402)
T TIGR03542 242 RSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARIL 321 (402)
T ss_pred ecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887411111111233222333444578899999888888666666777889999999999
Q ss_pred HHHHHhCCCeeeCCCCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 362 VDAFQSLGLKVNGGKNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 362 ~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
.+.|++.|+++.++.+|+|+|++++. .++.+++..+++++||.+.||+.|+..+.+++||+++.+++++++++++|+++
T Consensus 322 ~~~L~~~~~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 322 RKALEAAGFKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred HHHHHhcCceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence 99999888888777789999999984 45678899989878999999999976667899999877899999999999987
Q ss_pred C
Q 013521 441 L 441 (441)
Q Consensus 441 l 441 (441)
|
T Consensus 402 ~ 402 (402)
T TIGR03542 402 L 402 (402)
T ss_pred C
Confidence 5
No 4
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-57 Score=448.46 Aligned_cols=392 Identities=24% Similarity=0.388 Sum_probs=316.5
Q ss_pred CcccchhhhHHhhhhCCC--CCccccccccccccccccCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCCCCC-Cc-HH
Q 013521 14 PLKATVPFTMDFFLSSRW--PVPRHCTEVSRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQP-IP-DI 89 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~-~~-~~ 89 (441)
++++||++||++|+.+|| +++|++.......... +......... ......++|+.|.++.. +| ..
T Consensus 40 vs~~Tv~~ay~~L~~~G~i~~~~gs~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~i~f~~g~p~~~~fp~~~ 108 (459)
T COG1167 40 VSRSTVSRAYEELEARGYIESRPGSAPPSGRPVRLE----------LLKPSDPELL-EDDPSVIDFAGGLPDPSLFPLEA 108 (459)
T ss_pred CcHHHHHHHHHHHHhCcceeeccCCCcccccccccc----------hhhhhhcccc-cCCCceecCCCCCCCcccCCHHH
Confidence 449999999999999999 9988844443221110 1111000000 22357899999976532 34 44
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHh-h-hCCCCCCcEEEcCCcHHHHHHH-HHhcCCCCEEEEeCC
Q 013521 90 ITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFY-K-DMGIEGDEIFISDGAQSDISRL-QMLLGSNVTVAVQDP 166 (441)
Q Consensus 90 ~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~-~-~~~~~~~~I~~t~G~~~al~~l-~~l~~~gd~Vlv~~p 166 (441)
+.+++.+.++.... .....|++..|..+||++|++|+. . ++.+++++|++|+|+++|++++ ..+++|||.|++++|
T Consensus 109 ~~~~~~~~~~~~~~-~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~P 187 (459)
T COG1167 109 LRRALARVLRNYGA-SLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDP 187 (459)
T ss_pred HHHHHHHHHhhcch-hhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 55566666654432 226788888999999999999997 3 8888999999999999999984 667899999999999
Q ss_pred CchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC---CCCccEEEEc-CCCCccccCCCHHHHHHHHH
Q 013521 167 SFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST---TSRTDIIFFC-SPNNPTGHAATWQQLKKLVE 241 (441)
Q Consensus 167 ~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~---~~~~~~v~i~-~p~NPtG~~~~~~~~~~i~~ 241 (441)
+|++...+++..| .+++.||+|++ +++++ ++. ..++|++|++ +.|||||.+||.+++++|++
T Consensus 188 tY~~~~~~~~~~g------------~~~~~vp~d~~-G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~ 254 (459)
T COG1167 188 TYPGALQALEALG------------ARVIPVPVDED-GIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLA 254 (459)
T ss_pred CcHHHHHHHHHcC------------CcEEecCCCCC-CCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHH
Confidence 9999999999999 69999999965 65554 332 2479999986 66999999999999999999
Q ss_pred HHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHH
Q 013521 242 FAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIV 320 (441)
Q Consensus 242 ~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~ 320 (441)
+|++||++|||||+|++|.+++. +.++..++. +++|||++||||+++ ||+|+||+++|+++ ++.+...+
T Consensus 255 lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~-~~rViy~gSFSK~l~-PglRlG~vv~p~~~--------~~~~~~~k 324 (459)
T COG1167 255 LAEKYDVLIIEDDYYGELRYDGPPPPPLKALDA-PGRVIYLGSFSKTLA-PGLRLGYVVAPPEL--------IEKLLRLK 324 (459)
T ss_pred HHHHcCCeEEeeCcchhhhcCCCCCCChHhhCC-CCCEEEEeeehhhcc-cccceeeeeCCHHH--------HHHHHHHH
Confidence 99999999999999999999865 445777753 689999999999996 99999999999988 57888888
Q ss_pred hhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhC---CCeeeCCCCceEEEEEcCC-CChHHHHH
Q 013521 321 CTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSL---GLKVNGGKNAPYVWVQFPG-SSSWDVFA 395 (441)
Q Consensus 321 ~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~-~~~~~~~~ 395 (441)
.....+++.+.|.+....+.++.+ +|++++++.|+++++.+.+.|+++ .+.+..|.+|+|+|++++. .++.+++.
T Consensus 325 ~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~ 404 (459)
T COG1167 325 QAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDARELLA 404 (459)
T ss_pred HHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCHHHHHH
Confidence 888888999999999999985545 799999999999999999999997 4677888899999999984 46677777
Q ss_pred HHHHhcCeEEeC-CCCcCCCC--CCeEEEEeec-CHHHHHHHHHHHHhhC
Q 013521 396 EILEKTHILTIP-GSGFGPGG--NEHIRVSAFG-HREYISEACRRLKNFL 441 (441)
Q Consensus 396 ~ll~~~gi~v~p-g~~f~~~~--~~~iRls~~~-~~~~~~~~l~~l~~~l 441 (441)
.++++ |+.+.| |..|...+ .+++||+++. +.+++++++++|.+++
T Consensus 405 ~a~~~-gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~ 453 (459)
T COG1167 405 AALEK-GVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALL 453 (459)
T ss_pred HHHHC-CCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 77765 999999 99886543 6799999965 7899999999998753
No 5
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.2e-56 Score=444.96 Aligned_cols=378 Identities=19% Similarity=0.215 Sum_probs=303.2
Q ss_pred CcccchhhhHHhhhhCCC--CCccccccccccccccccCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHH
Q 013521 14 PLKATVPFTMDFFLSSRW--PVPRHCTEVSRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIIT 91 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~ 91 (441)
++|+||.+||++|+++|| .++|+||||+..... .... . ...+..+++|+.|.|+.++++.+.
T Consensus 41 vsr~tv~~a~~~L~~~g~i~~~~~~G~~v~~~~~~-~~~~-------------~--~~~~~~~i~L~~g~p~~~~~p~~~ 104 (431)
T PRK15481 41 VNRNTVAAAYKRLVTAGLAQSQGRNGTVIRGSPSP-VALE-------------G--GDPGTPLHDLAGGNPDPQRLPDLS 104 (431)
T ss_pred CCHHHHHHHHHHHHHCCCEEEeCCCceEEccCcch-hhhc-------------c--cCCcchhhhhhcCCCChhHhHHHH
Confidence 349999999999999999 999999999742110 0000 0 011235789999988877666677
Q ss_pred HHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchh
Q 013521 92 SAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPA 170 (441)
Q Consensus 92 ~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~ 170 (441)
+++.+... ....|++..|..+||+++++|+.+..+ .+++|++|+|+++++.+ +..+++|||.|++++|+|+.
T Consensus 105 ~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~ 177 (431)
T PRK15481 105 RYFARLSR------TPRLYGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLS 177 (431)
T ss_pred HHHHHhhh------hhhhcCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHH
Confidence 77776543 234698889999999999999864322 45799999999999998 57788999999999999999
Q ss_pred hHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEc-CCCCccccCCCHHHHHHHHHHHHHc
Q 013521 171 YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFC-SPNNPTGHAATWQQLKKLVEFAKAN 246 (441)
Q Consensus 171 ~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~-~p~NPtG~~~~~~~~~~i~~~a~~~ 246 (441)
+...++..| .+++.++++++ +++++ +++ ..++|+++++ |||||||.++|.+++++|+++|++|
T Consensus 178 ~~~~~~~~g------------~~~~~v~~~~~-g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~ 244 (431)
T PRK15481 178 SINMLRYAG------------FSASPVSVDAE-GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARY 244 (431)
T ss_pred HHHHHHHcC------------CeEEeeccCCC-CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence 999999999 58999998754 44332 221 2478999998 9999999999999999999999999
Q ss_pred -CcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcC
Q 013521 247 -GSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFN 325 (441)
Q Consensus 247 -~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (441)
+++||+||+|.+|.+++.+ +.... ..+++|+++||||.|| ||+|+||+++|+++ ++.+.........
T Consensus 245 ~~~~ii~De~Y~~~~~~~~~-~~~~~--~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~--------~~~~~~~~~~~~~ 312 (431)
T PRK15481 245 PQVLVIIDDHFALLSSSPYH-SVIPQ--TTQRWALIRSVSKALG-PDLRLAFVASDSAT--------SARLRLRLNSGTQ 312 (431)
T ss_pred CCceEEecCchhhhccCCCC-CCCcC--CCCCEEEEeeeccccC-CCceeEEEeCCHHH--------HHHHHHHHhcccc
Confidence 9999999999998765422 22222 2468999999999999 99999999999887 4556554444444
Q ss_pred CCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeE
Q 013521 326 GASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHIL 404 (441)
Q Consensus 326 ~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 404 (441)
+++.++|.++.++|++..+ +|++++++.++++++.+.+.|+++|+.+..|++|+|+|++++. ++.+++..+. ++||.
T Consensus 313 ~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~-~~~~~~~~l~-~~gV~ 390 (431)
T PRK15481 313 WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT-DSQATALTLA-KSGWL 390 (431)
T ss_pred CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC-CHHHHHHHHH-HCCcE
Confidence 5899999999999987655 6889999999999999999999988887677899999999974 4567777766 46999
Q ss_pred EeCCCCcCCC-CCCeEEEEeec-CHHHHHHHHHHHHhhC
Q 013521 405 TIPGSGFGPG-GNEHIRVSAFG-HREYISEACRRLKNFL 441 (441)
Q Consensus 405 v~pg~~f~~~-~~~~iRls~~~-~~~~~~~~l~~l~~~l 441 (441)
+.||+.|+.. ..+++||+++. +++++++++++|++++
T Consensus 391 v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 391 VREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQAL 429 (431)
T ss_pred EecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence 9999999642 35689999975 7899999999999874
No 6
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.3e-55 Score=432.15 Aligned_cols=346 Identities=23% Similarity=0.421 Sum_probs=289.2
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~a 147 (441)
+.++++|+.|++++++++.+.+++.+.+.. ....+|++..|..+||+++|+|+.+ +++++++ +|++|+|++++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHD----PSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----cccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 457999999999998899999999887753 3456798889999999999999975 5668898 79999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+.+ +..++++||.|++++|+|+.+...++..| .+++.++++.++++..+++. ..++|++++|
T Consensus 105 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 172 (388)
T PRK07366 105 TAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAG------------GQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLS 172 (388)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcC------------CEEEEEECCCccCCCCCHHHHHHhhcccceEEEEe
Confidence 998 46678999999999999999999999999 58999999876666665432 2578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCcccccCCCcceeEEEecCCcccCCccceeEEEE
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS--PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV 299 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~ 299 (441)
|||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++..++...+++|+++||||.||+||+|+||++
T Consensus 173 ~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v 252 (388)
T PRK07366 173 YPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI 252 (388)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehc
Confidence 9999999999999999999999999999999999999987653 34566654434578999999999999999999999
Q ss_pred eeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCce
Q 013521 300 VPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAP 379 (441)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 379 (441)
+++++ ++.+...+.....+.+...+.++.+.+.+ ..+++++.++.++++++.+.+.|+++|+.+..|++|+
T Consensus 253 ~~~~l--------i~~l~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~ 323 (388)
T PRK07366 253 GNAQL--------IQALRQVKAVVDFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATM 323 (388)
T ss_pred CCHHH--------HHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeE
Confidence 99887 45666655543333333344445666653 2578899999999999999999998888777778999
Q ss_pred EEEEEcCCC---ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 380 YVWVQFPGS---SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 380 ~~~~~~~~~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
|+|++++.. ++.+++..+++++||.+.||+.|+..+.+++||+++.+++++++++++|++++
T Consensus 324 f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 324 YVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred EEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 999999842 46778888888889999999999766678999999888999999999999875
No 7
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-54 Score=425.57 Aligned_cols=343 Identities=26% Similarity=0.483 Sum_probs=293.7
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCC-CcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEG-DEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~-~~I~~t~G~~~a 147 (441)
+.++++|+.|+|++++++.+.+++.+.+.. ....+|+ ..|..+||++||+|+.+ +..+++ ++|++|+|++++
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 105 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQ----KESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG 105 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhc----cccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH
Confidence 457999999999988889999999887753 2334564 57999999999999975 566788 899999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+.+ +..++++||.|++++|+|+.+...+...| .+++.+++++++++.++++. .++++++++|
T Consensus 106 l~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~ 173 (399)
T PRK07681 106 LVHLPMVYANPGDIILVPDPGYTAYETGIQMAG------------ATSYYMPLKKENDFLPDLELIPEEIADKAKMMILN 173 (399)
T ss_pred HHHHHHHhCCCCCEEEECCCCccchHHHHHhcC------------CEEEEEecCCCCCCcCCHHHHHHhccccceEEEEe
Confidence 998 56778999999999999999999999999 58999999876666555432 2578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
|||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++..+++..+++|+++||||.+|+||+|+||+++
T Consensus 174 ~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~ 253 (399)
T PRK07681 174 FPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG 253 (399)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEec
Confidence 9999999999999999999999999999999999999987653 345656654557899999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
|+++ ++.+.........+++.+.|.++.+++.+. ..++++.++.++++++.+.+.|+++|+++..+.+|+|
T Consensus 254 ~~~l--------~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f 324 (399)
T PRK07681 254 NEEI--------VRALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMF 324 (399)
T ss_pred CHHH--------HHHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeE
Confidence 8887 466666665555568899999999999753 4678899999999999999999998988877789999
Q ss_pred EEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHh
Q 013521 381 VWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKN 439 (441)
Q Consensus 381 ~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~ 439 (441)
+|++++ +.++.+++..+++++||.+.||+.|+..+++++||+++.+++++++++++|++
T Consensus 325 ~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 325 VWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 999997 44677888999887899999999998666789999998888999999999987
No 8
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=3.7e-54 Score=423.33 Aligned_cols=343 Identities=23% Similarity=0.357 Sum_probs=294.4
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~al 148 (441)
.++|+|+.|.|++++|+.+.+++.+.+.+ ...+|++..|.++||+++++|+.+ +..++++ +|++|+|+++++
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al 128 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRD-----GKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAI 128 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhc-----CCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHH
Confidence 46999999999998899999999988763 346899999999999999999976 5557787 799999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC---C--CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS---T--TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~--~~~~~~v~i~~ 222 (441)
.+ +..+++|||+|++++|+|+.+...++..| .+++.++++.++ +..+++ . .+++|+|+++|
T Consensus 129 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~-~~~~~~~l~~~~~~~~k~i~i~~ 195 (413)
T PLN00175 129 AATILGLINPGDEVILFAPFYDSYEATLSMAG------------AKIKTVTLRPPD-FAVPEDELKAAFTSKTRAILINT 195 (413)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcC------------CEEEEEECCccc-CCCCHHHHHHhcCcCceEEEecC
Confidence 87 67788999999999999999999999998 589999987543 444322 1 35789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
||||||.++|.+++++|+++|++|+++||+||+|.++.+++.+.++..+++..+++|+++||||.|++||+|+||+++|+
T Consensus 196 p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~ 275 (413)
T PLN00175 196 PHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP 275 (413)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH
Confidence 99999999999999999999999999999999999998865555676666556789999999999999999999999998
Q ss_pred cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEE
Q 013521 303 ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVW 382 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 382 (441)
++ .+.+.........+++.+.|.++.++|++ +..++++.++.|+++++.+.+.|+++|+.+..+.+++|+|
T Consensus 276 ~l--------~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~ 346 (413)
T PLN00175 276 HL--------TWGVRQAHSFLTFATATPMQWAAVAALRA-PESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVM 346 (413)
T ss_pred HH--------HHHHHHHHhhccCCCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEE
Confidence 87 45666666655667899999999999974 3568899999999999999999999999888888999999
Q ss_pred EEcC--CC-ChHHHHHHHHHhcCeEEeCCCCcCC---CCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 383 VQFP--GS-SSWDVFAEILEKTHILTIPGSGFGP---GGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 383 ~~~~--~~-~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
++++ +. ++.+++..+++++||.+.||+.|+. .+.++|||+++.+++++++++++|++++
T Consensus 347 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~ 411 (413)
T PLN00175 347 VDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKL 411 (413)
T ss_pred EeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 9984 33 4678889998888999999999963 3467999999888999999999998864
No 9
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.3e-54 Score=420.56 Aligned_cols=346 Identities=23% Similarity=0.426 Sum_probs=289.4
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~a 147 (441)
+.++++|+.|.|+.+.|+.+++++.+.+.. ....+|++..|..+||+++|+|+.+ ++.++++ +|++|+|++++
T Consensus 32 ~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 32 GEDIIDFSMGNPDGPTPQHIIDKLCESAQK----PKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred CCCEEEcCCcCCCCCCCHHHHHHHHHHhcC----CccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 457899999999887777788887776542 3457899889999999999999975 5667887 79999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC-------C-----CCC
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS-------T-----TSR 214 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~-------~-----~~~ 214 (441)
+.+ +..++++||.|++++|+|+.+...+...| .+++.++++.++++..+.+ + ..+
T Consensus 108 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 175 (403)
T PRK08636 108 YVHLVQAITNPGDVAIVPDPAYPIHSQAFILAG------------GNVHKMPLEYNEDFELDEDQFFENLEKALRESSPK 175 (403)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcC------------CEEEEEeccccccCccChhhhhhHHHHHHhhccCC
Confidence 998 57788999999999999999999999999 5888888854443444422 1 257
Q ss_pred ccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccc
Q 013521 215 TDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGV 293 (441)
Q Consensus 215 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~ 293 (441)
++++++||||||||.++|.+++++|+++|++|+++||+||+|+++.+++. ..++..++...+++++++||||.||+||+
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 255 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW 255 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence 89999999999999999999999999999999999999999999987653 45666665445788999999999999999
Q ss_pred eeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 013521 294 RLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVN 373 (441)
Q Consensus 294 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 373 (441)
|+||+++|+++ ++.+.........+++.+.|.++..++. ....+++++++.++++++.+.+.|++.|+.+.
T Consensus 256 RiG~iv~~~~l--------i~~~~~~~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (403)
T PRK08636 256 RVGFVVGNKKL--------VGALKKIKSWLDYGMFTPIQVAATIALD-GDQSCVEEIRETYRKRRDVLIESFANAGWELQ 326 (403)
T ss_pred eeeeeeCCHHH--------HHHHHHHHHHhcccCChHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 99999999887 4566665554444567788888777665 33578899999999999999999999888887
Q ss_pred CCCCceEEEEEcCC----CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 374 GGKNAPYVWVQFPG----SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 374 ~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
.+.+|+|+|++++. .++.+++..+++++||.+.||..|+..+++++||+++.+.+++++++++|++++
T Consensus 327 ~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l 398 (403)
T PRK08636 327 KPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFL 398 (403)
T ss_pred CCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 78899999999973 235778888888889999999999876678999999888899999999998764
No 10
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=8.7e-54 Score=419.23 Aligned_cols=345 Identities=28% Similarity=0.464 Sum_probs=291.0
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~a 147 (441)
+.++++|+.|.|+.++++.+.+++.+.+.. ....+|++..|..+||+++|+|+.+ +.+++++ +|++|+|++++
T Consensus 31 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~ 106 (389)
T PRK08068 31 GHDVINLGQGNPDQPTPEHIVEALQEAAEN----PANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAG 106 (389)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 356899999999888888888888887763 3456898889999999999999975 5557888 89999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+.+ +..++++||.|++++|+|+.+...++..| .+++.++++.++++.++++. ..+++++++|
T Consensus 107 l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~ 174 (389)
T PRK08068 107 LVELPQCLMNPGDTILVPDPGYPDYLSGVALAR------------AQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLN 174 (389)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcC------------CEEEEeecccccCCCCCHHHHHHhccccceEEEEE
Confidence 987 57778999999999999999999999999 58999999766566655332 2578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP-SPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
|||||||.++|.+++++|+++|++|+++||+||+|.++.+++ .+.++....+..+++++++||||.||+||+|+||+++
T Consensus 175 ~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~ 254 (389)
T PRK08068 175 YPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG 254 (389)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec
Confidence 999999999999999999999999999999999999988765 3445544433456889999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
++++ ++.+.........+++.+.|.++.+++.+ +..+++++++.++++++.+.+.|+++|+.+.++.+|+|
T Consensus 255 ~~~l--------~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~ 325 (389)
T PRK08068 255 NESV--------IEAINLLQDHLFVSLFGAIQDAAIEALLS-DQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFF 325 (389)
T ss_pred CHHH--------HHHHHHHHhhccCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEE
Confidence 8887 45666655544445566778888888863 34788999999999999999999999988887778899
Q ss_pred EEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 381 VWVQFPG-SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 381 ~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+|+++++ .++.++...+++++||.+.||+.|+..+++++||+++.+++.+.+++++|+++
T Consensus 326 ~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 326 AWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 9999974 46778888888778999999999987667899999988889999999999874
No 11
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-53 Score=416.90 Aligned_cols=343 Identities=26% Similarity=0.399 Sum_probs=291.0
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al~ 149 (441)
.++++|+.|+|++++++.+.+++.+... ....+|++..|..+||+++|+|+.+ ++++++++|++|+|+++++.
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~ 103 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAK-----KGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMY 103 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHH
Confidence 3689999999998888877776665543 3456899999999999999999964 67789999999999999999
Q ss_pred H-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcCC
Q 013521 150 R-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSP 223 (441)
Q Consensus 150 ~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p 223 (441)
+ +..++++||+|++++|+|+++...+...| .+++.++.++++++..+++. .++++++++++|
T Consensus 104 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p 171 (384)
T PRK06348 104 LALQSILDPGDEVIIHEPYFTPYKDQIEMVG------------GKPIILETYEEDGFQINVKKLEALITSKTKAIILNSP 171 (384)
T ss_pred HHHHHhcCCCCEEEEeCCCCcchHHHHHHcC------------CEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCC
Confidence 8 57778999999999999999999999998 47888887554555555332 357899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
|||||.++|.+++++|+++|++|+++||+||+|.++.+++.+.++..+++..+++|+++||||.+|+||+|+||+++|++
T Consensus 172 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~ 251 (384)
T PRK06348 172 NNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDY 251 (384)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHH
Confidence 99999999999999999999999999999999999988654445656654467899999999999999999999999987
Q ss_pred ccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEE
Q 013521 304 LRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVW 382 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 382 (441)
+ ++.+.........+++.+.|.++..++.+ ...+++++++.++++++.+.+.|+++ ++.+.++.+|+|+|
T Consensus 252 ~--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~ 322 (384)
T PRK06348 252 I--------IETAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAF 322 (384)
T ss_pred H--------HHHHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEE
Confidence 7 45666666555556789999999888873 34678899999999999999999887 77878778899999
Q ss_pred EEcC--CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 383 VQFP--GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 383 ~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
++++ +.++.+++..+++++||.+.||+.|+..++++|||+++.+++++++++++|+++
T Consensus 323 ~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 323 INIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 9997 356788888888878999999999987667899999987899999999999875
No 12
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.4e-53 Score=418.98 Aligned_cols=346 Identities=27% Similarity=0.469 Sum_probs=293.7
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~a 147 (441)
++++++|+.|+|++++|+.+++++.+.+.. ....+|++..|..+||+++|+|+.+ +..++++ +|++|+|++++
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQD----PRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHcC----cccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 457899999999988888889888887643 3456898889999999999999975 5567787 89999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+.+ +..++++||.|++++|+|+.+...+...| .+++.++++.++.+..+++. .+++++++++
T Consensus 105 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~ 172 (405)
T PRK09148 105 FANMAQAITAPGDVILCPNPSYPIHAFGFIMAG------------GVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVN 172 (405)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcC------------CEEEEEeCCCCCCCccCHHHHHhhccccceEEEEe
Confidence 998 56778999999999999999998888888 58999998766555555432 2578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
+||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++.++++..+++++++||||.+|+||+|+||+++
T Consensus 173 ~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~ 252 (405)
T PRK09148 173 YPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG 252 (405)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC
Confidence 9999999999999999999999999999999999999887653 345656654457789999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
++++ ++.+...+.....+++.+.|.++.+++.+ ...+++++++.++++++.+.+.|+++++.+..+.+|+|
T Consensus 253 ~~~~--------i~~l~~~~~~~~~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f 323 (405)
T PRK09148 253 NERL--------IAALTRVKSYLDYGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMF 323 (405)
T ss_pred CHHH--------HHHHHHHHHHhccCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEE
Confidence 8887 46677666655566788999999999974 34678999999999999999999998888777789999
Q ss_pred EEEEcCCC----ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 381 VWVQFPGS----SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 381 ~~~~~~~~----~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+|++++.. ++.++...+++++||.+.||+.|+..+++++||+++.+.+.+.+++++|.+++
T Consensus 324 ~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l 388 (405)
T PRK09148 324 AWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFL 388 (405)
T ss_pred EEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 99999742 35678888887789999999999765678999999878899999999998763
No 13
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-54 Score=398.04 Aligned_cols=356 Identities=28% Similarity=0.451 Sum_probs=300.3
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEE-eCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--
Q 013521 53 YLFPEISMRESEHIRKHPDARLIR-LGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK-- 129 (441)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~i~-l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~-- 129 (441)
++|.++.+...++. ..+ |++|.|++++|+.+.+++++++.+ ...++|++..|.++|+++|++.++.
T Consensus 18 ~vw~e~~~la~e~~-------~~~~LgqGfp~~~~P~fv~ea~~~~~~~----~~~~qYt~~~G~p~L~~aL~k~~se~~ 86 (420)
T KOG0257|consen 18 YVWTEINRLAAEHK-------VPNPLGQGFPDFPPPKFVTEAAKNAAKE----PSTNQYTRGYGLPQLRKALAKAYSEFY 86 (420)
T ss_pred cHHHHHHHHHHhcC-------CCCcccCCCCCCCCcHHHHHHHHHHhcc----chhccccccCCchHHHHHHHHHHHHHh
Confidence 67888888777653 233 999999999999999999999986 4677899999999999999999876
Q ss_pred -hCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecC------C
Q 013521 130 -DMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCR------P 201 (441)
Q Consensus 130 -~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~------~ 201 (441)
......++|++|+|+.+++.. ++.++++||+|++.+|.|+.|...+..+|. ..++++.. .
T Consensus 87 ~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~------------tpv~v~~~~~~g~~~ 154 (420)
T KOG0257|consen 87 GGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGG------------TPVFVPLKPKEGNVS 154 (420)
T ss_pred ccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCC------------cceeecccccccccc
Confidence 333456789999999999985 899999999999999999999999999995 55555555 2
Q ss_pred CCCccCCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCc
Q 013521 202 ENNFFPDLST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAR 275 (441)
Q Consensus 202 ~~~~~~~~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~ 275 (441)
...|.+|.+. ++++|+|++|+||||||.++|++++++|+++|++||++||.||+|..+.+++. +.++..++++.
T Consensus 155 s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ 234 (420)
T KOG0257|consen 155 SSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMY 234 (420)
T ss_pred CccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchh
Confidence 2345555332 58999999999999999999999999999999999999999999999999875 66788889999
Q ss_pred ceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCc-------HHHHH
Q 013521 276 EVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDG-------FQALR 348 (441)
Q Consensus 276 ~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-------~~~~~ 348 (441)
++++.++||||+||++|||+||+++|+.++ .....+........+.+.|.|..+++.... ..+..
T Consensus 235 ertitvgS~gKtf~~TGWrlGW~igp~~L~--------~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~ 306 (420)
T KOG0257|consen 235 ERTITVGSFGKTFGVTGWRLGWAIGPKHLY--------SALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFIT 306 (420)
T ss_pred heEEEeccccceeeeeeeeeeeeechHHhh--------hhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHH
Confidence 999999999999999999999999977663 455555666666678888888887776322 13456
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCC-------------CChHHHHHHHHHhcCeEEeCCCCcCCCC
Q 013521 349 TVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG-------------SSSWDVFAEILEKTHILTIPGSGFGPGG 415 (441)
Q Consensus 349 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ll~~~gi~v~pg~~f~~~~ 415 (441)
.+.+.|+++|+.+.+.|+++|+++..|++++|+|++++. .++-.+..+++++.|+.+.|++.|+...
T Consensus 307 ~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~ 386 (420)
T KOG0257|consen 307 ELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSRE 386 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCch
Confidence 699999999999999999999999999999999999971 1244577899999999999999997543
Q ss_pred -----CCeEEEEeecCHHHHHHHHHHHHh
Q 013521 416 -----NEHIRVSAFGHREYISEACRRLKN 439 (441)
Q Consensus 416 -----~~~iRls~~~~~~~~~~~l~~l~~ 439 (441)
.+.+|++++.+.+.++.++++|+.
T Consensus 387 ~~~~~~~~~r~~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 387 HIKVAERLVRFCFCKADETLRKAIERLKK 415 (420)
T ss_pred hhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 468899988899999999999973
No 14
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=3.2e-53 Score=414.78 Aligned_cols=344 Identities=31% Similarity=0.512 Sum_probs=293.0
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~a 147 (441)
++++++|+.|+|++++++.+.+++.+.+.. ....+|++..|..+||+++|+|+.+ +..++++ +|++|+|++++
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 28 GVDVISLGIGDPDLPTPKHIVEALCKAAEN----PENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 467999999999988889999999987753 3456898889999999999999975 4555676 69999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+.+ +..++++||.|++++|+|+.+...++..| .+++.++++.++++..+++. ..+++++++|
T Consensus 104 l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G------------~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~ 171 (383)
T TIGR03540 104 IAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAG------------GEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFIN 171 (383)
T ss_pred HHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcC------------CEEEEEecCcccCCccCHHHHHhhccccceEEEEe
Confidence 998 56678999999999999999999999999 58999999766566544322 3578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP-SPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
|||||||.++|.+++++|+++|++||++||+||+|.++.+++ .+.++..+++..+++|+++||||.||+||+|+||+++
T Consensus 172 ~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~ 251 (383)
T TIGR03540 172 YPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG 251 (383)
T ss_pred CCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC
Confidence 999999999999999999999999999999999999988764 3455656554446789999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
++++ ++.+.........+++.+.|.++.+++.+ ...|++++++.++++++.+.+.|+++|+.+.++.+|+|
T Consensus 252 ~~~l--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~ 322 (383)
T TIGR03540 252 NADL--------IAGLGKVKTNVDSGVFQAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFY 322 (383)
T ss_pred CHHH--------HHHHHHHHHhcccCCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcceE
Confidence 9887 45666665555556778899999999875 35788999999999999999999999998888788999
Q ss_pred EEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHh
Q 013521 381 VWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKN 439 (441)
Q Consensus 381 ~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~ 439 (441)
+|++++ +.++.+++.++++++||.+.||+.|+..+++++||+++.+++++++++++|++
T Consensus 323 ~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 323 VWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 999997 44677888888887899999999997656789999998888999999999976
No 15
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-53 Score=415.00 Aligned_cols=345 Identities=18% Similarity=0.272 Sum_probs=286.4
Q ss_pred CCeEEeCCCCCC-CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCC-CcEEEcCCcHHH
Q 013521 72 ARLIRLGIGDTT-QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEG-DEIFISDGAQSD 147 (441)
Q Consensus 72 ~~~i~l~~g~~~-~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~-~~I~~t~G~~~a 147 (441)
.+.++|+.|.++ .++|+.+.+++.+.+.. ....+|++..|..+||++||+|+.+ +..+++ ++|++|+|++++
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVER----GGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhc----CCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 468999999987 45677888888887754 3456798889999999999999987 444677 899999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCC---CCCccCCCCC-----CCCccEE
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRP---ENNFFPDLST-----TSRTDII 218 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~~~-----~~~~~~v 218 (441)
+.+ +..++++||+|++++|+|+.+...+...| .+++.++++. ++++..+++. ..+++++
T Consensus 115 l~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v 182 (405)
T PRK06207 115 LFLAVAATVARGDKVAIVQPDYFANRKLVEFFE------------GEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVF 182 (405)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcC------------CEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEE
Confidence 997 57778999999999999999999999999 5888888752 2233334322 2578999
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
++||||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++..++...+++++++||||.+++||+|+||
T Consensus 183 ~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ 262 (405)
T PRK06207 183 LFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGV 262 (405)
T ss_pred EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEE
Confidence 9999999999999999999999999999999999999999988653 334544443457899999999999999999999
Q ss_pred EEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC
Q 013521 298 TVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGK 376 (441)
Q Consensus 298 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 376 (441)
+++|+++ ++.+.........+.+.++|.++.+++++ +..++++.++.++++++.+.+.|+++ ++.+..++
T Consensus 263 ii~~~~l--------~~~~~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~ 333 (405)
T PRK06207 263 AFGSPAI--------IDRMEKLQAIVSLRAAGYSQAVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQ 333 (405)
T ss_pred EEcCHHH--------HHHHHHHHhHhccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCC
Confidence 9999887 46666666555556788899999999974 23456777888889999999999887 78888778
Q ss_pred CceEEEEEcCC--CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 377 NAPYVWVQFPG--SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 377 ~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+|+|+|++++. .++.++...+++++||.+.||+.|+...++++||+++.+.+++++++++|++++
T Consensus 334 gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l 400 (405)
T PRK06207 334 AGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLI 400 (405)
T ss_pred eeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 89999999974 356778888877789999999999866688999999888899999999998763
No 16
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-53 Score=412.94 Aligned_cols=358 Identities=26% Similarity=0.414 Sum_probs=295.0
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--h
Q 013521 53 YLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--D 130 (441)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~ 130 (441)
+.|..+.........+.++.++++|++|+|++++++.+.+++.+.+.. .....|+ +.|..+||+++|+|+.+ +
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~----~~~~~Y~-~~G~~~lr~aia~~~~~~~g 99 (410)
T PRK06290 25 YKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKK----PENRGYA-DNGIQEFKEAAARYMEKVFG 99 (410)
T ss_pred hHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----CCCCCCC-CCCcHHHHHHHHHHHHHHcC
Confidence 445555554444444455668999999999998889999999887643 3345686 48999999999999975 4
Q ss_pred CC-CCCC-cEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccC
Q 013521 131 MG-IEGD-EIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFP 207 (441)
Q Consensus 131 ~~-~~~~-~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 207 (441)
+. ++++ +|++|+|+++++.+ +..++++||.|++++|+|+.+...++..| .+++.++++.++++.+
T Consensus 100 ~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~~ 167 (410)
T PRK06290 100 VKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYG------------GEVYNLPLLEENNFLP 167 (410)
T ss_pred CCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcC------------CEEEEEecCCCcCCcC
Confidence 54 7786 79999999999988 56778999999999999999999999999 5899999987666665
Q ss_pred CCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEe
Q 013521 208 DLST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEIS 282 (441)
Q Consensus 208 ~~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 282 (441)
+++. ..++++|++||||||||.++|.+++++|+++|++||++||+||+|.++.+++.+.++..+.+..+++|+++
T Consensus 168 d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~ 247 (410)
T PRK06290 168 DLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIH 247 (410)
T ss_pred CHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEe
Confidence 5432 25789999999999999999999999999999999999999999999887654556666654457889999
Q ss_pred cCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Q 013521 283 SFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIV 362 (441)
Q Consensus 283 S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 362 (441)
||||.+|+||+|+||+++++++ ++.+.........+++.++|.++.+++.+. .++++.++.++++++.+.
T Consensus 248 SfSK~~g~~GlRiG~ii~~~~l--------~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~--~~~~~~~~~~~~~~~~l~ 317 (410)
T PRK06290 248 SLSKAYNMTGWRLAFVVGNELI--------VKAFATVKDNNDSGQFIAIQKAGIYALDHP--EITEKIREKYSRRLDKLV 317 (410)
T ss_pred echhhcCCchhheEeEEeCHHH--------HHHHHHHHhccccCCcHHHHHHHHHHhhCc--HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887 466666665555556778999999999753 467889999999999999
Q ss_pred HHHHhCCCeeeCCCCceEEEEEcCCC--------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec---CHHHHH
Q 013521 363 DAFQSLGLKVNGGKNAPYVWVQFPGS--------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG---HREYIS 431 (441)
Q Consensus 363 ~~L~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~---~~~~~~ 431 (441)
+.|+++|+.+.++.+++|+|++++.. ++.++.+.|+++.++.+.||+.|+ +++||+++. ++++.+
T Consensus 318 ~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~----~~lRi~~~~~~~~~~~~~ 393 (410)
T PRK06290 318 KILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG----HFLRFSVTFEAKDEEEED 393 (410)
T ss_pred HHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc----CeEEEEEEcccccccchh
Confidence 99999999888888899999999732 567888999988788888988664 599999863 677788
Q ss_pred HHHHHHHhhC
Q 013521 432 EACRRLKNFL 441 (441)
Q Consensus 432 ~~l~~l~~~l 441 (441)
+.++.|++.|
T Consensus 394 ~~~~~l~~~~ 403 (410)
T PRK06290 394 RILEEIKRRL 403 (410)
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 17
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-52 Score=411.25 Aligned_cols=343 Identities=24% Similarity=0.399 Sum_probs=291.2
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al 148 (441)
++++++|+.|+|++++|+.+.+++.+.+.. ...+|++..|..++|+++|+|+.+ ++++++++|++|+|+++++
T Consensus 31 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 105 (387)
T PRK08960 31 GHDVIHLEIGEPDFTTAEPIVAAGQAALAA-----GHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGAL 105 (387)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhc-----CCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHH
Confidence 457899999999988899999999998863 335798889999999999999975 5678999999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
++ +..++++||+|++++|+|+.+...+...| .+++.++++.++++..+++. .++++++++++
T Consensus 106 ~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~ 173 (387)
T PRK08960 106 LLASSLLVDPGKHWLLADPGYPCNRHFLRLVE------------GAAQLVPVGPDSRYQLTPALVERHWNADTVGALVAS 173 (387)
T ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHhcC------------CeEEEEecCcccCCCCCHHHHHHHhCccceEEEEEC
Confidence 98 56678999999999999999999999888 58888888766555555432 35678899999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
||||||.++|.+++++|+++|++||++||+||+|.++.+++.+.++..+ ++++++++||||.+|+||+|+||+++|+
T Consensus 174 p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~---~~~vi~~~S~SK~~g~~GlRiG~~~~~~ 250 (387)
T PRK08960 174 PANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEV---DDDAFVLNSFSKYFGMTGWRLGWLVAPP 250 (387)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhc---cCCEEEEeecccccCCcccEEEEEEcCH
Confidence 9999999999999999999999999999999999998876544455443 4679999999999999999999999998
Q ss_pred cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCee-eCCCCceEE
Q 013521 303 ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKV-NGGKNAPYV 381 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~ 381 (441)
++ ++.+.........+++.+.|.++.+++.+....+++++++.++++++.+.+.|+++|+.+ ..|.+|+|+
T Consensus 251 ~~--------~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~ 322 (387)
T PRK08960 251 AA--------VPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYL 322 (387)
T ss_pred HH--------HHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEE
Confidence 87 456666666555667899999999998754457889999999999999999999888764 356789999
Q ss_pred EEEcCC--CChHHHHHHHHHhcCeEEeCCCCcCCC-CCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 382 WVQFPG--SSSWDVFAEILEKTHILTIPGSGFGPG-GNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 382 ~~~~~~--~~~~~~~~~ll~~~gi~v~pg~~f~~~-~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
|++++. .++.+++..+++++||.+.||+.|+.. .++++||+++.+.+.+.+++++|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 323 YADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGL 385 (387)
T ss_pred EEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 999974 466778888888789999999999753 457999999888899999999998864
No 18
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=8.2e-53 Score=412.15 Aligned_cols=345 Identities=31% Similarity=0.541 Sum_probs=291.7
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~a 147 (441)
+.++++|+.|+|++++++.+.+++.+.+.. ....+|++..|..+||+++|+|+.+ +..++++ +|++|+|++++
T Consensus 30 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~ 105 (385)
T PRK09276 30 GVDVISLGIGDPDLPTPDHIIEAMCKAVED----PENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEG 105 (385)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 457899999999988888999999988764 3446798888999999999999975 4556776 59999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+.+ +..++++||.|++++|+|+.+...++..| .+++.++++.++++.++++. .+++++|+++
T Consensus 106 i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~ 173 (385)
T PRK09276 106 IAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAG------------GEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFIN 173 (385)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcC------------CEEEEEecCCCCCCcCCHHHHHHhccccceEEEEe
Confidence 998 56678999999999999999999999888 58899998766566555332 3578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
|||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++..+++..+++|+++||||.||+||+|+||+++
T Consensus 174 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~ 253 (385)
T PRK09276 174 YPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG 253 (385)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC
Confidence 9999999999999999999999999999999999999887642 456666654456789999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
++++ ++.+.........+++.+.|.++..++.+ ...+++++++.++++++.+.+.|++.|+++..+.+|+|
T Consensus 254 ~~~l--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 324 (385)
T PRK09276 254 NADL--------IAGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATFY 324 (385)
T ss_pred CHHH--------HHHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceE
Confidence 9887 45666655544555677889988888864 35788999999999999999999998888877778899
Q ss_pred EEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 381 VWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 381 ~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+|++++ +.++.++..++++++||.+.||+.|+..+++++||+++.+++++.+++++|+++
T Consensus 325 ~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 385 (385)
T PRK09276 325 VWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKKL 385 (385)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhhC
Confidence 999997 446778888888878999999999976667899999988889999999999763
No 19
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=4.5e-53 Score=413.00 Aligned_cols=344 Identities=28% Similarity=0.428 Sum_probs=291.1
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~al 148 (441)
+++|+|+.|+|++++++.+.+++.+.+. ....+|++..|..++|+++|+|+.+ +..++++ +|++|+|+++++
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 94 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLE-----QGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL 94 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 3689999999998888888888888765 3356798889999999999999976 5556775 899999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
.+ +..++++||.|++++|+|+.+...++..| .+++.++.+.++++..+++. .++++++++++
T Consensus 95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 162 (378)
T PRK07682 95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAG------------GVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCS 162 (378)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcC------------CEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEEC
Confidence 98 56788999999999999999999998888 47788887654444444322 25789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
||||||.++|.+++++|+++|++|+++||+||+|.++.+++.+.++..+++..+++++++||||.||+||+|+||+++++
T Consensus 163 p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~ 242 (378)
T PRK07682 163 PNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV 242 (378)
T ss_pred CCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH
Confidence 99999999999999999999999999999999999998876444555555445789999999999999999999999998
Q ss_pred cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEE
Q 013521 303 ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVW 382 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 382 (441)
++ ++.+.........+++.+.|.++.+++++ +..+++++++.++++++.+.+.|+++|+.+..|++++|+|
T Consensus 243 ~~--------i~~l~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~~~~~ 313 (378)
T PRK07682 243 YF--------SEAMLKIHQYSMMCAPTMAQFAALEALRA-GNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYAF 313 (378)
T ss_pred HH--------HHHHHHHHHhhccCCCHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCeeEEEE
Confidence 87 46666555555566889999999999974 3456889999999999999999999998888888999999
Q ss_pred EEcC--CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 383 VQFP--GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 383 ~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+.++ +.++.++..++++++||.+.||..|+..+++++||+++.+.+++++++++|++++
T Consensus 314 ~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l 374 (378)
T PRK07682 314 PSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFV 374 (378)
T ss_pred EeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 9985 3467788888887779999999999866689999999888899999999999864
No 20
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1e-52 Score=412.68 Aligned_cols=342 Identities=24% Similarity=0.417 Sum_probs=285.2
Q ss_pred CCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCC-CCCC-cEEEcCCcH
Q 013521 70 PDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMG-IEGD-EIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~-~~~~-~I~~t~G~~ 145 (441)
.++++++|+.|+|++++|+.+.+++.+.+. ...+|++..|..+||++||+|+.+ ++. ++++ +|++|+|++
T Consensus 27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~ 100 (396)
T PRK09147 27 ADLPPISLSIGEPKHPTPAFIKDALAANLD------GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSR 100 (396)
T ss_pred cCCCeEecCCCCCCCCCCHHHHHHHHHHhh------hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChH
Confidence 467899999999999888999999888653 345798889999999999999975 455 7775 999999999
Q ss_pred HHHHH-HHHhcCC---CCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCcc
Q 013521 146 SDISR-LQMLLGS---NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTD 216 (441)
Q Consensus 146 ~al~~-l~~l~~~---gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~ 216 (441)
+++.+ +..++++ ||.|++++|+|+.+...+...| .+++.+|++++++|.++++. .++++
T Consensus 101 ~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k 168 (396)
T PRK09147 101 EALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAG------------AEPYFLNCDPANNFAPDFDAVPAEVWARTQ 168 (396)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcC------------CEEEEeccCccccCccCHHHHHHHHhhccE
Confidence 99997 5777899 8999999999999999999998 58999999876666665432 25789
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCcccc----cC-CCcceeEEEecCCcccC
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS--PRSIYE----IP-GAREVAIEISSFSKFAG 289 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~--~~~~~~----~~-~~~~~~i~i~S~SK~~~ 289 (441)
++++||||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.+... .. +..+++|+++||||.++
T Consensus 169 ~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 248 (396)
T PRK09147 169 LLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSN 248 (396)
T ss_pred EEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccC
Confidence 999999999999999999999999999999999999999999887652 222111 11 12478999999999999
Q ss_pred CccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 013521 290 FTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG 369 (441)
Q Consensus 290 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 369 (441)
+||+|+||+++|+++ ++.+.........+++.+.|.++.+.+.+ ..++++.++.++++++.+.+.|.+.
T Consensus 249 ~~GlRiG~~~~~~~l--------~~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~- 317 (396)
T PRK09147 249 VPGLRSGFVAGDAAL--------LKKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV- 317 (396)
T ss_pred CccceeeeecCCHHH--------HHHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 999999999999887 45666555544456788899988888853 3578899999999999999999875
Q ss_pred CeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCC------CCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 370 LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGP------GGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+.+..|++|+|+|++++ .++.+++..+++++||.+.||+.|+. .+.+++||+++.+++++++++++|++++
T Consensus 318 ~~~~~p~~g~f~~~~~~-~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 318 LDVQLPDAGFYLWAKVP-GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFC 394 (396)
T ss_pred cCCCCCCeeEEEEEECC-CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 66666789999999998 45678888888778999999999862 2368999999888999999999999864
No 21
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=7.1e-53 Score=416.72 Aligned_cols=352 Identities=22% Similarity=0.308 Sum_probs=281.5
Q ss_pred CCCeEEeCCCCC---CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcH
Q 013521 71 DARLIRLGIGDT---TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQ 145 (441)
Q Consensus 71 ~~~~i~l~~g~~---~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~ 145 (441)
+.+++++++|+| ++++|+.+.+++.+.+.. ....+|++..|..+||+++|+|+.+ ++.+++++|++|+|++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~----~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~ 106 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMD----DKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLG 106 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhc----CCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHH
Confidence 457899999999 678999999999987754 4567899999999999999999976 5678899999999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhHhHHH-HhccccccccccCccceeEEeecCCCCCccCCCCC-------CCCccE
Q 013521 146 SDISRLQMLLGSNVTVAVQDPSFPAYIDTSV-IVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-------TSRTDI 217 (441)
Q Consensus 146 ~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-------~~~~~~ 217 (441)
+++.++..++++||.|++++|+|+++..... ..| .+++.+++++++++.++++. .+++++
T Consensus 107 ~al~~~~~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g------------~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 174 (433)
T PRK06855 107 DAIAKIYGLLRREARVIGPSPAYSTHSSAEAAHAG------------YPPVTYRLDPENNWYPDLDDLENKVKYNPSIAG 174 (433)
T ss_pred HHHHHHHHhcCCCCeEEEeCCCCchHHHHHHHhcC------------CeEEEEecccccCCCCCHHHHHHHHhcCCCceE
Confidence 9999865688999999999999999764422 335 47788888765566555432 146789
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
+++||||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++.++.. ..++|+++||||.+++||+|+|
T Consensus 175 i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG 253 (433)
T PRK06855 175 ILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIG-DVPGIALKGISKELPWPGSRCG 253 (433)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcC-cCCeEEEecCccccCCCcceEE
Confidence 99999999999999999999999999999999999999999988653 456666632 2367999999999999999999
Q ss_pred EEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeeeC
Q 013521 297 WTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSL-GLKVNG 374 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 374 (441)
|+++|+...........+.+..... ...+++.+.|.++.+++.+..+ ++++++++.|+++++.+.+.|+++ ++.+.+
T Consensus 254 ~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~ 332 (433)
T PRK06855 254 WIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNR 332 (433)
T ss_pred EEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccC
Confidence 9998532100000001222222222 2334788999999999986543 789999999999999999999887 778788
Q ss_pred CCCceEEEEEcCCC----------------------------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-
Q 013521 375 GKNAPYVWVQFPGS----------------------------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG- 425 (441)
Q Consensus 375 ~~~~~~~~~~~~~~----------------------------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~- 425 (441)
|.+|+|+|++++.. ++.+++..+++++||.+.||+.|+.. .+++||+++.
T Consensus 333 p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~-~~~~Rls~~~~ 411 (433)
T PRK06855 333 TNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE-LNGFRVTLLER 411 (433)
T ss_pred CCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC-CCceEEEECCC
Confidence 88999999999742 35677778888899999999999753 3569999975
Q ss_pred CHHHHHHHHHHHHhhC
Q 013521 426 HREYISEACRRLKNFL 441 (441)
Q Consensus 426 ~~~~~~~~l~~l~~~l 441 (441)
+.+++++++++|++++
T Consensus 412 ~~~~i~~~~~~l~~~~ 427 (433)
T PRK06855 412 DEEKFEWIYQTLAEKI 427 (433)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 8899999999998864
No 22
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-52 Score=405.42 Aligned_cols=353 Identities=21% Similarity=0.349 Sum_probs=284.5
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--h
Q 013521 53 YLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--D 130 (441)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~ 130 (441)
+.+..+.+.... ..+.++.++++|+.|+|++++|+.+.+++.+... ....|+++.|..+||+++|+|+.+ +
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~------~~~~Y~~~~G~~~lr~aia~~l~~~~g 78 (374)
T PRK05839 6 YPFEKLRELLKE-ITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAH------LLNKYPKSAGEESLREAQRGFFKRRFK 78 (374)
T ss_pred chHHHHHHHHHH-hhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhh------ccCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 445555444432 2222356899999999999888888888877542 345798889999999999999976 5
Q ss_pred CCCCCCcEEEcCCcHHHHHHH-HHhc--CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccC
Q 013521 131 MGIEGDEIFISDGAQSDISRL-QMLL--GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFP 207 (441)
Q Consensus 131 ~~~~~~~I~~t~G~~~al~~l-~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 207 (441)
.++++++|++|+|+++++..+ ..++ ++||.|++++|+|+.+...+...| .+++.++.+.++++.+
T Consensus 79 ~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~~ 146 (374)
T PRK05839 79 IELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASR------------AKVLLMPLTKENDFTP 146 (374)
T ss_pred CCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcC------------CEEEEeecccccCCcC
Confidence 568999999999999999875 4443 579999999999999999999888 5999999987667777
Q ss_pred CCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc-----CCCcceeEE
Q 013521 208 DLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI-----PGAREVAIE 280 (441)
Q Consensus 208 ~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~-----~~~~~~~i~ 280 (441)
++.. ..+++++++||||||||.++|.+++++|+++|++||++||+||+|.++.++....++... ....+++|+
T Consensus 147 d~~~~~~~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~ 226 (374)
T PRK05839 147 SLNEKELQEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLV 226 (374)
T ss_pred CcchhhhccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEE
Confidence 6532 357999999999999999999999999999999999999999999998654433343322 112368999
Q ss_pred EecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Q 013521 281 ISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKI 360 (441)
Q Consensus 281 i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 360 (441)
++||||.|++||+|+||+++++++ ++.+.........+++.+.|.++.+++.+ ..++++.++.++++++.
T Consensus 227 ~~SfSK~~~~~GlRiG~ii~~~~~--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~ 296 (374)
T PRK05839 227 INSISKRSSAPGLRSGFIAGDASI--------LKKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKL 296 (374)
T ss_pred EeccccccCCccceeEEEecCHHH--------HHHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHH
Confidence 999999999999999999998877 45666555544456788889988877764 35678889999999999
Q ss_pred HHHHHHhCCCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCC--CCCeEEEEeecCHHHHHHHHHHHH
Q 013521 361 IVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPG--GNEHIRVSAFGHREYISEACRRLK 438 (441)
Q Consensus 361 l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~--~~~~iRls~~~~~~~~~~~l~~l~ 438 (441)
+.+.| ++. .|++|+|+|++++ ++.++..++++++||.+.||+.|+.. +++++||+++.+++++.+++++|+
T Consensus 297 ~~~~l---~~~--~p~gg~fi~~~~~--~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~ 369 (374)
T PRK05839 297 AREIL---GIT--IPPATFYVWLPVD--NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIK 369 (374)
T ss_pred HHHhc---CCC--CCCeeEEEEEeCC--ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 88876 343 4679999999997 45788888887789999999988643 468999999778999999999999
Q ss_pred hhC
Q 013521 439 NFL 441 (441)
Q Consensus 439 ~~l 441 (441)
+++
T Consensus 370 ~~l 372 (374)
T PRK05839 370 TYL 372 (374)
T ss_pred HHh
Confidence 864
No 23
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-52 Score=409.85 Aligned_cols=345 Identities=27% Similarity=0.471 Sum_probs=289.5
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~a 147 (441)
+.++++|+.|.|+.++|+.+++++.+.+.. ....+|++..|.++||+++|+|+.+ +..++++ +|++|+|++++
T Consensus 34 g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~a 109 (394)
T PRK05942 34 GLDLIDLGMGNPDGAAPQPVIEAAIAALAD----PQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEG 109 (394)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----CCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHH
Confidence 457999999998877777788887776643 3456898889999999999999975 4557787 59999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+.+ +..++++||+|++++|+|+.+...+...| .+++.++++.++++..+++. .+++++++++
T Consensus 110 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 177 (394)
T PRK05942 110 LTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAG------------AQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFN 177 (394)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcC------------CEEEEeecCCccCCccCHHHHHHhccccceEEEEc
Confidence 998 56778999999999999999988888888 58999998766565554332 3689999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
|||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++..+++..+++|+++||||.||+||+|+||+++
T Consensus 178 ~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~ 257 (394)
T PRK05942 178 YPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG 257 (394)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeec
Confidence 9999999999999999999999999999999999999887643 445655654456789999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
++++ ++.+.........+++.++|.++.+++.. ..+++++.++.++++++.+.+.|++.|+.+..+.+|+|
T Consensus 258 ~~~l--------~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f 328 (394)
T PRK05942 258 NRHI--------IQGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMY 328 (394)
T ss_pred CHHH--------HHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeeE
Confidence 8877 46666665544556788899999888863 34678899999999999999999988888877778889
Q ss_pred EEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 381 VWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 381 ~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+|++++ ..++.++..++++++||.+.||+.|+..+.++|||++..+.+.+.+++++|+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 329 LWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 999997 346677888888888999999999976667899999987889999999999864
No 24
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.6e-52 Score=409.27 Aligned_cols=353 Identities=18% Similarity=0.296 Sum_probs=284.9
Q ss_pred hcCCCCCeEEeCCCCCC----CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEE
Q 013521 67 RKHPDARLIRLGIGDTT----QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFI 140 (441)
Q Consensus 67 ~~~~~~~~i~l~~g~~~----~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~ 140 (441)
....++++|+|++|+|+ +++|+.+.+++.+++.. ....+|++..|..+||+++|+|+.+ ++++++++|++
T Consensus 27 ~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~i 102 (409)
T PLN00143 27 NEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRS----AKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYL 102 (409)
T ss_pred ccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhC----cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEE
Confidence 34456789999999998 89999999999998864 4456799999999999999999975 56789999999
Q ss_pred cCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCC
Q 013521 141 SDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSR 214 (441)
Q Consensus 141 t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~ 214 (441)
|+|+++++.+ +..++++||.|++++|+|+.+...+...| .+++.+++++++++..+++. ..+
T Consensus 103 t~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 170 (409)
T PLN00143 103 TLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHH------------LEIRHFDLLPEKGWEVDLDAVEAIADEN 170 (409)
T ss_pred ecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcC------------CEEEEEeccCCCCCcCCHHHHHHhcccC
Confidence 9999999998 57778999999999999999999999888 58888888655566555432 257
Q ss_pred ccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC-CcccccCCCcceeEEEecCCcccCCccc
Q 013521 215 TDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSP-RSIYEIPGAREVAIEISSFSKFAGFTGV 293 (441)
Q Consensus 215 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~~~~G~ 293 (441)
+++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++.+ .++..++ ..+++|+++||||.|++||+
T Consensus 171 ~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~-~~~~vi~~~SfSK~f~~pGl 249 (409)
T PLN00143 171 TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFA-SIVPVITLGSISKRWMIPGW 249 (409)
T ss_pred CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhc-ccCcEEEEccchhhcCCCcc
Confidence 889999999999999999999999999999999999999999999886532 3444443 23579999999999999999
Q ss_pred eeEEEEee-c-cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Q 013521 294 RLGWTVVP-E-ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG-L 370 (441)
Q Consensus 294 r~G~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 370 (441)
|+||++++ + .++. .....+.+...... ...++.++|.++.+++.+....++++.++.++++++.+.+.|++++ .
T Consensus 250 RvG~~v~~~p~~~~~--~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 326 (409)
T PLN00143 250 GLGWLVTCDPSGLLQ--ICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCI 326 (409)
T ss_pred ceEEEEeeCchhhhh--hHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999994 2 2310 00112233333222 2235778999999999754456788999999999999999998874 3
Q ss_pred ee-eCCCCceEEEEEcCC------CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 371 KV-NGGKNAPYVWVQFPG------SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 371 ~~-~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
.. ..|.+|+|+|++++. .++.+++..+++++||.+.||+.|+ .++++||+++.+++++++++++|++++
T Consensus 327 ~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~--~~~~iRi~~~~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 327 MCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVG--LKNWLRITFAVEQSSLEDGLGRLKSFC 402 (409)
T ss_pred CCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 32 356789999999973 1466777888888899999999995 368999999888999999999998763
No 25
>PLN02187 rooty/superroot1
Probab=100.00 E-value=4.5e-52 Score=412.56 Aligned_cols=351 Identities=20% Similarity=0.307 Sum_probs=284.7
Q ss_pred cCCCCCeEEeCCCCCC----CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEc
Q 013521 68 KHPDARLIRLGIGDTT----QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFIS 141 (441)
Q Consensus 68 ~~~~~~~i~l~~g~~~----~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t 141 (441)
+.+++++|+|+.|+|+ +.+|+.+.+++.+.++. ....+|++..|..++|+++|+|+.+ +.++++++|++|
T Consensus 62 ~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it 137 (462)
T PLN02187 62 KDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS----GKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLT 137 (462)
T ss_pred cCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEe
Confidence 3446789999999987 55678889999988764 3346798999999999999999975 567899999999
Q ss_pred CCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCc
Q 013521 142 DGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRT 215 (441)
Q Consensus 142 ~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~ 215 (441)
+|+++++.+ +..+++|||.|++++|+|+.|...+...| .+++.+++.+++++..|++. .+++
T Consensus 138 ~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g------------~~~~~~~l~~~~~~~~d~~~l~~~~~~~~ 205 (462)
T PLN02187 138 AGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSG------------LEVRKFDLLPEKEWEIDLEGIEAIADENT 205 (462)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcC------------CEEEEEeCccccCCccCHHHHHHhcCCCc
Confidence 999999998 57778999999999999999998888888 58888888655556555432 3578
Q ss_pred cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccce
Q 013521 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVR 294 (441)
Q Consensus 216 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r 294 (441)
+++++||||||||.+++.+++++|+++|++||++||+||+|.++.+++. +.++..++. ..++|+++||||.|++||+|
T Consensus 206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~-~~~vi~l~SfSK~f~~pGlR 284 (462)
T PLN02187 206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFAS-IVPVLTLAGISKGWVVPGWK 284 (462)
T ss_pred EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhcc-CCcEEEEecchhhcCCccce
Confidence 8999999999999999999999999999999999999999999888653 345655543 24699999999999999999
Q ss_pred eEEEEeecc-ccccCCchhHHHHHHHHhhhcC--CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Q 013521 295 LGWTVVPEE-LRYSNGYPVIKDFNRIVCTCFN--GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG-L 370 (441)
Q Consensus 295 ~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 370 (441)
+||++++++ .+ ....+.+...+..... +++.+.|.++.+++++....+++++++.++++++.+.+.|++++ +
T Consensus 285 iG~~v~~~p~~~----~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~ 360 (462)
T PLN02187 285 IGWIALNDPEGV----FETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCV 360 (462)
T ss_pred eEEEEecCchhH----HHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999998532 11 0002344444443322 35789999999999754457899999999999999999999874 3
Q ss_pred e-eeCCCCceEEEEEcCC-----C-ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 371 K-VNGGKNAPYVWVQFPG-----S-SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 371 ~-~~~~~~~~~~~~~~~~-----~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
. +..|++|+|+|++++. . ++.+++.++++++||.+.||+.|+ .++||||+++.+++.+++++++|.+++
T Consensus 361 ~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg--~~~~iRis~~~~~e~l~~al~rL~~~l 436 (462)
T PLN02187 361 VCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG--LKNWMRITIGVEAHMLEDALERLKGFC 436 (462)
T ss_pred cCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC--CCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 3 2356788999998852 1 356788888888899999999996 468999999888999999999998763
No 26
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.8e-52 Score=406.40 Aligned_cols=342 Identities=24% Similarity=0.443 Sum_probs=283.4
Q ss_pred CCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCC--CCCC-cEEEcCCc
Q 013521 70 PDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMG--IEGD-EIFISDGA 144 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~--~~~~-~I~~t~G~ 144 (441)
.+.++++|+.|+|++++|+.+.+++.+.+. ...+|++..|..+||+++|+|+.+ +++ ++++ +|++|+|+
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga 99 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALRENLH------GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT 99 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHhh------ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence 356899999999999889999999988653 345798899999999999999976 333 6775 89999999
Q ss_pred HHHHHH-HHHhcCCCCE--EEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCcc
Q 013521 145 QSDISR-LQMLLGSNVT--VAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTD 216 (441)
Q Consensus 145 ~~al~~-l~~l~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~ 216 (441)
++++.+ +..+++|||. |++++|+|+.+...+...| .+++.+++++++++.++.+. ..++|
T Consensus 100 ~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k 167 (393)
T TIGR03538 100 REALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAG------------AEPYFLNCTAENGFLPDFDAVPESVWRRCQ 167 (393)
T ss_pred HHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcC------------CeEEEeeccccCCCCCCHHHHHHHHhhcce
Confidence 999998 5677899986 9999999999999998888 58999999776667666432 25789
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC--CCCccc-c---cC-CCcceeEEEecCCcccC
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP--SPRSIY-E---IP-GAREVAIEISSFSKFAG 289 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~--~~~~~~-~---~~-~~~~~~i~i~S~SK~~~ 289 (441)
+++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++ .+.+.. . .. ...+++|+++||||.|+
T Consensus 168 ~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 247 (393)
T TIGR03538 168 LLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSN 247 (393)
T ss_pred EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcC
Confidence 99999999999999999999999999999999999999999988763 222221 1 11 12468999999999999
Q ss_pred CccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 013521 290 FTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG 369 (441)
Q Consensus 290 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 369 (441)
+||+|+||+++++++ ++.+.........+++.+.|.++.+.+.+ .+++++.++.++++++.+.+.|+++
T Consensus 248 ~~GlRvG~~i~~~~l--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~- 316 (393)
T TIGR03538 248 LPGLRSGFVAGDAEI--------LKAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV- 316 (393)
T ss_pred CcccceEEEecCHHH--------HHHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 999999999999887 45666655544456788999988888853 3678899999999999999999876
Q ss_pred CeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCC------CCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 370 LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGP------GGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+.+..+.+|+|+|++++ .++.++++.+++++||.+.||+.|+. .+.+++||+++.+++++++++++|++++
T Consensus 317 ~~~~~p~gg~f~~~~~~-~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~ 393 (393)
T TIGR03538 317 LDLELPDAGFYLWPKVP-GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSFI 393 (393)
T ss_pred CcccCCCeeEEEEEECC-CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHhC
Confidence 45556789999999998 45677888888878999999999852 2467999999888999999999999864
No 27
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-52 Score=377.38 Aligned_cols=363 Identities=23% Similarity=0.359 Sum_probs=314.8
Q ss_pred CchHHHHHHHHHHHhcCCC----CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHh
Q 013521 53 YLFPEISMRESEHIRKHPD----ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFY 128 (441)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~ 128 (441)
+.|.++.++......||.. ++++.|++.+++++.||.+.+|+++.+. .+..+|+ .+..++.++++.|.+
T Consensus 2 ~~F~~~~~r~~t~s~KWd~~~g~~DvlPmWVADMDf~~pp~i~~Al~~rvd-----hGvfGY~--~~~~~~~~ai~~w~~ 74 (388)
T COG1168 2 YDFDTVIERLGTNSLKWDAHPGNEDVLPMWVADMDFPTPPEIIEALRERVD-----HGVFGYP--YGSDELYAAIAHWFK 74 (388)
T ss_pred CchhhhhhhcCCCceeccccCCCCCcceeeeecccCCCCHHHHHHHHHHHh-----cCCCCCC--CCCHHHHHHHHHHHH
Confidence 4566677776666667743 5799999999999999999999999997 6778894 688899999999997
Q ss_pred h--hCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCC-CCC
Q 013521 129 K--DMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRP-ENN 204 (441)
Q Consensus 129 ~--~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~-~~~ 204 (441)
+ ++.++++-|++++|...++.+ +..+.+|||.|++.+|.|+++......-|+ ++...|+.. ++.
T Consensus 75 ~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R------------~~i~~pL~~~~~~ 142 (388)
T COG1168 75 QRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGR------------KVIENPLVEDDGR 142 (388)
T ss_pred HhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCc------------EEEeccccccCCc
Confidence 6 677889999999999999998 788999999999999999999999999985 788888874 445
Q ss_pred ccCCCCC------CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCcccccCC-Ccc
Q 013521 205 FFPDLST------TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP-SPRSIYEIPG-ARE 276 (441)
Q Consensus 205 ~~~~~~~------~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~-~~~~~~~~~~-~~~ 276 (441)
+..|++. ..++|+.++||||||||.+++.+++.+|.++|.+||+.||+||+|+++.+.+ .+.+..++.. ..+
T Consensus 143 y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~ 222 (388)
T COG1168 143 YEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFAD 222 (388)
T ss_pred EEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhc
Confidence 5556433 3568999999999999999999999999999999999999999999999887 4555555432 347
Q ss_pred eeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 013521 277 VAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKE 356 (441)
Q Consensus 277 ~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 356 (441)
+.|.+.|.||+|+++|+++++++.+++.++ .+.+.++......++|.++..|..++++ .+..|++.+++.++.
T Consensus 223 ~~it~~saSKtFNlaGL~~a~~Ii~n~~lr------~~~~~~l~~~~~~~~n~lg~~A~~aAY~-~G~~WLd~L~~yl~~ 295 (388)
T COG1168 223 NSITLTSASKTFNLAGLKCAYIIISNRELR------AKFLKRLKRNGLHGPSALGIIATEAAYN-QGEPWLDELLEYLKD 295 (388)
T ss_pred ceEEEeeccccccchhhhheeEEecCHHHH------HHHHHHHHHhcCCCCchHHHHHHHHHHH-hchHHHHHHHHHHHH
Confidence 899999999999999999999999887752 1234455556677799999999999998 567899999999999
Q ss_pred HHHHHHHHHHhC--CCeeeCCCCceEEEEEcC--CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHH
Q 013521 357 NAKIIVDAFQSL--GLKVNGGKNAPYVWVQFP--GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISE 432 (441)
Q Consensus 357 ~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~ 432 (441)
+++++.+.|++. ++++..|++++.+|+++. +.++.++.+.++++.+|.+.+|..||..+.+|+|++++++++.+++
T Consensus 296 N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~e 375 (388)
T COG1168 296 NRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEE 375 (388)
T ss_pred HHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHH
Confidence 999999999987 899999989999999997 5566789999999999999999999999999999999999999999
Q ss_pred HHHHHHhhC
Q 013521 433 ACRRLKNFL 441 (441)
Q Consensus 433 ~l~~l~~~l 441 (441)
++++|+.++
T Consensus 376 al~ri~~al 384 (388)
T COG1168 376 ALERLKRAL 384 (388)
T ss_pred HHHHHHHHH
Confidence 999998764
No 28
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=8.9e-52 Score=407.87 Aligned_cols=349 Identities=19% Similarity=0.322 Sum_probs=286.6
Q ss_pred CCCeEEeCCCCCC----CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCc
Q 013521 71 DARLIRLGIGDTT----QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGA 144 (441)
Q Consensus 71 ~~~~i~l~~g~~~----~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~ 144 (441)
+.++|+|++|+|+ +++|+.+.+++.+++.. .....|++..|..++|+++|+|+.+ +.++++++|++|+|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~ 126 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRS----GKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGC 126 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHc----CcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCH
Confidence 5689999999985 67788999999988864 3445798888999999999999975 566789999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEE
Q 013521 145 QSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDII 218 (441)
Q Consensus 145 ~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v 218 (441)
++++.+ +..++++||+|++++|+|+.|...+...| .+++.+++.++.+|..|++. .++++++
T Consensus 127 ~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 194 (430)
T PLN00145 127 AQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSG------------LEVRHFDLLPERGWEVDLEGVEALADENTVAM 194 (430)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcC------------CEEEEeeCCcccCCcCCHHHHHHHhCcCceEE
Confidence 999998 56677999999999999999988888888 58888887666566666442 3678999
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
+++|||||||.++|.+++++|+++|+++|++||+||+|.++.+++. +.++..++. .+++|+++||||.|++||+|+||
T Consensus 195 ~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pG~RlG~ 273 (430)
T PLN00145 195 VIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGE-VAPVLTLGSISKRWVVPGWRLGW 273 (430)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcc-cCcEEEEeccccccCCCCeeEEE
Confidence 9999999999999999999999999999999999999999988653 455555543 46799999999999999999999
Q ss_pred EEee--ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCee-e
Q 013521 298 TVVP--EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKV-N 373 (441)
Q Consensus 298 l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~ 373 (441)
++++ +.++.. .++.+.+.... ....+++.+.|.++.+++.+....++++.++.++++++.+.+.|+++ |+.+ .
T Consensus 274 iv~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~ 350 (430)
T PLN00145 274 IATCDPNGILKE--TKVVDSIRNYL-NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPH 350 (430)
T ss_pred EEEecchhhhhh--hHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 9984 333210 00112333332 23334678999999999985445788999999999999999999987 7765 3
Q ss_pred CCCCceEEEEEcCC------CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 374 GGKNAPYVWVQFPG------SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 374 ~~~~~~~~~~~~~~------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
.|++++|+|++++. .++.+++.++++++||.+.||+.|+. ++|+||+++.+.+.+++++++|++++
T Consensus 351 ~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~--~~~lRis~~~~~~~l~~al~rl~~~~ 422 (430)
T PLN00145 351 KPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGM--KNWLRITFAIDPPSLEDGLERLKSFC 422 (430)
T ss_pred CCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 57899999999862 24667888999999999999999974 68999999888899999999998763
No 29
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.3e-51 Score=403.91 Aligned_cols=343 Identities=29% Similarity=0.473 Sum_probs=288.6
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al 148 (441)
++++++|+.|.|++++++.+.+++.+.+. .....|++..|..+||+++|+|+.+ +.++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al 103 (388)
T PRK07337 29 GRDIIHMGIGEPDFTAPEPVVEAAARALR-----RGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAAL 103 (388)
T ss_pred CCCEEEeCCcCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHH
Confidence 45799999999998888889999988775 3346798888999999999999975 5567899999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
.+ +..++++||+|++++|+|+++...+...| .+++.++++.++++..+.+. .+++++|++++
T Consensus 104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~ 171 (388)
T PRK07337 104 LLACLALVERGDEVLMPDPSYPCNRHFVAAAE------------GRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLAS 171 (388)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHHHcC------------CEEEEeecCCccCCcCCHHHHHhhcCccceEEEEEC
Confidence 97 56778999999999999999998888888 58888998765555555332 36789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
||||||.++|.+++++|+++|++|+++||+||+|.++.+++.+.+...+ ++++++++||||.+|+||+|+||+++++
T Consensus 172 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~---~~~vi~~~S~SK~~~~~G~RiG~~~~~~ 248 (388)
T PRK07337 172 PSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSL---GDDVITINSFSKYFNMTGWRLGWLVVPE 248 (388)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhc---cCCEEEEEechhhcCCchhheeeeecCH
Confidence 9999999999999999999999999999999999998876544444333 3678999999999999999999999998
Q ss_pred cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCee-eCCCCceEE
Q 013521 303 ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKV-NGGKNAPYV 381 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~ 381 (441)
++ .+.+.........+++.+.|.++.+++.+....++++.++.++++++.+.+.|+++|+.+ ..|.+|+|+
T Consensus 249 ~l--------~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~ 320 (388)
T PRK07337 249 AL--------VGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYV 320 (388)
T ss_pred HH--------HHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEE
Confidence 77 466666665555567899999999998755556678889999999999999999887764 356789999
Q ss_pred EEEcCC------CChHHHHHHHHHhcCeEEeCCCCcCC-CCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 382 WVQFPG------SSSWDVFAEILEKTHILTIPGSGFGP-GGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 382 ~~~~~~------~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
|++++. .++.+++.++++++||.+.||+.|+. .+++++||+++.+++++++++++|.+++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 321 YADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred EEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 999973 35677888888888999999999974 3468999999888999999999999864
No 30
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.4e-51 Score=402.44 Aligned_cols=341 Identities=21% Similarity=0.313 Sum_probs=285.1
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCC--CC-CcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI--EG-DEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~--~~-~~I~~t~G~~~al 148 (441)
.++++|+.|+|++++++.+.+++.+.+.. ...+|++..|..+||+++++++.+.+|+ ++ ++|++|+|+++++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al 103 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRD-----GHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL 103 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHh-----CCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence 46899999999988899999999887753 3457999999999999999999764444 44 6899999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
.+ +..++++||+|++++|+|+.+...++..| .+++.++++++ ++..+++. .+++++++++|
T Consensus 104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~i~~ 170 (384)
T PRK12414 104 YAAISALVHPGDEVIYFEPSFDSYAPIVRLQG------------ATPVAIKLSPE-DFRVNWDEVAAAITPRTRMIIVNT 170 (384)
T ss_pred HHHHHHhcCCCCEEEEeCCCccchHHHHHHcC------------CEEEEEecCcc-ccccCHHHHHhhcCcccEEEEEcC
Confidence 87 67788999999999999999999988888 58888888753 34444322 25789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++..+++..+++|+++||||.||+||+|+||++++
T Consensus 171 p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~ 250 (384)
T PRK12414 171 PHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP 250 (384)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC
Confidence 999999999999999999999999999999999999888653 3355555444578999999999999999999999999
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEE
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYV 381 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 381 (441)
+++ ++.+.........+++.+.|.++.+++.+... ..+.++.|+++++.+.+.|+++|+.+.++.+|+|+
T Consensus 251 ~~l--------~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~ 320 (384)
T PRK12414 251 AEL--------MDEIRKVHQFMVFSADTPMQHAFAEALAEPAS--YLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFM 320 (384)
T ss_pred HHH--------HHHHHHHHhheecCCCcHHHHHHHHHhcCChH--HHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEE
Confidence 887 46666666555666889999999999975432 34678899999999999999999888888899999
Q ss_pred EEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCCCC--CCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 382 WVQFPG---SSSWDVFAEILEKTHILTIPGSGFGPGG--NEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 382 ~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~--~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
|++++. ..+.+++.++++++||.+.||+.|+..+ .++|||+++.+++++++++++|.++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~~ 384 (384)
T PRK12414 321 LARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCSL 384 (384)
T ss_pred EEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence 999863 3567788788888899999999996432 6899999988899999999999863
No 31
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=1.6e-51 Score=402.49 Aligned_cols=343 Identities=26% Similarity=0.410 Sum_probs=290.9
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~al 148 (441)
+++++|+.|.|++++++.+.+++.+.+. ....+|++..|..+||+++|+|+.+ +++++++ +|++|+|+++++
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al 102 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAIT-----ENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAI 102 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 4689999999988878888999999876 3346798889999999999999974 5667888 999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC---C--CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS---T--TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~--~~~~~~v~i~~ 222 (441)
.+ +..++++||.|++++|+|+.+...+...| .+++.++.+.+ ++..+.+ . .++++++++++
T Consensus 103 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~i~i~~ 169 (387)
T PRK07683 103 DIAFRTILEPGTEVILPAPIYPGYEPIIRLCG------------AKPVFIDTRST-GFRLTAEALENAITEKTRCVVLPY 169 (387)
T ss_pred HHHHHHhCCCCCEEEEcCCCccchHHHHHHcC------------CEEEEeecCcc-cCCCCHHHHHHhcCcCceEEEEeC
Confidence 98 56678999999999999999999999888 58888888753 5544422 1 35789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
||||||.++|.+++++|+++|+++|++||+||+|.++.+++.+.++..+.+.++++|+++||||.+|+||+|+||+++++
T Consensus 170 p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~ 249 (387)
T PRK07683 170 PSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPS 249 (387)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCH
Confidence 99999999999999999999999999999999999988765555666664456789999999999999999999999998
Q ss_pred cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEE
Q 013521 303 ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVW 382 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 382 (441)
++ ++.+.........+++.+.|.++.+++.+ +..++++.++.++++++.+.+.|++.++.+.++.+++|+|
T Consensus 250 ~l--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 320 (387)
T PRK07683 250 YL--------AKHILKVHQYNVTCASSISQYAALEALTA-GKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLF 320 (387)
T ss_pred HH--------HHHHHHHHHhccCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEE
Confidence 87 45565554444455678899999888874 3467888999999999999999998888888888899999
Q ss_pred EEcCC--CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 383 VQFPG--SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 383 ~~~~~--~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+.++. .++.+++.++++++||.+.||+.|+..+++++||+++.+++++++++++|.+++
T Consensus 321 ~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l 381 (387)
T PRK07683 321 PSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFL 381 (387)
T ss_pred EecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 99873 456778888888889999999999876689999999888999999999998763
No 32
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-51 Score=412.62 Aligned_cols=349 Identities=23% Similarity=0.362 Sum_probs=280.2
Q ss_pred CCCCeEEeCCCCCC----------------CCC-------------cHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHH
Q 013521 70 PDARLIRLGIGDTT----------------QPI-------------PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALR 120 (441)
Q Consensus 70 ~~~~~i~l~~g~~~----------------~~~-------------~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr 120 (441)
++.++|+|++|+|+ +.. |..+++++.+.+.... .....|++..|..+||
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~LR 121 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIG--GGTGAYTDSAGYPFVR 121 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCC--CcccCcCcccCCHHHH
Confidence 45789999999995 655 4477777776665432 2456799999999999
Q ss_pred HHHHHHHhh--hCCCCCCcEEEcCCcHHHHHH-HHHhc-CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEE
Q 013521 121 TAIADKFYK--DMGIEGDEIFISDGAQSDISR-LQMLL-GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVY 196 (441)
Q Consensus 121 ~~ia~~l~~--~~~~~~~~I~~t~G~~~al~~-l~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 196 (441)
++||+|+.+ ++.+++++|++|+|+++++.+ +..++ ++||.|++++|+|+.|...++..| .+++.
T Consensus 122 ~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g------------~~~v~ 189 (481)
T PTZ00377 122 KAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLG------------GKQVP 189 (481)
T ss_pred HHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcC------------CEEEE
Confidence 999999975 667889999999999999998 56677 799999999999999999999999 58899
Q ss_pred eecCCCCCccCCCCC-----C------CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC--
Q 013521 197 MNCRPENNFFPDLST-----T------SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP-- 263 (441)
Q Consensus 197 v~~~~~~~~~~~~~~-----~------~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~-- 263 (441)
++++++++|.++++. . .++|+++++|||||||.++|.+++++|+++|++||++||+||+|.++.+++
T Consensus 190 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~ 269 (481)
T PTZ00377 190 YYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEK 269 (481)
T ss_pred EEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCC
Confidence 999876677665432 1 278999999999999999999999999999999999999999999988843
Q ss_pred CCCcccc----cCCC---cceeEEEecCCcc-cCCccceeEEEEe---eccccccCCchhHHHHHHHHhhhcCCCcHHHH
Q 013521 264 SPRSIYE----IPGA---REVAIEISSFSKF-AGFTGVRLGWTVV---PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQ 332 (441)
Q Consensus 264 ~~~~~~~----~~~~---~~~~i~i~S~SK~-~~~~G~r~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
.+.++.. ++.. +.++|+++||||. +++||+|+||+++ |+++ ++.+..... ...+++.++|
T Consensus 270 ~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~l--------i~~l~~~~~-~~~~~~~~~Q 340 (481)
T PTZ00377 270 PFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEV--------REQIYKLAS-INLCSNVVGQ 340 (481)
T ss_pred CcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHH--------HHHHHHHhh-eecCCChHHH
Confidence 2334432 2211 2378999999997 5889999999997 6666 466666554 3345889999
Q ss_pred HHHHHhcCCC----c----H-HHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEEEcC--CC-----------C
Q 013521 333 AGGLACLSPD----G----F-QALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQFP--GS-----------S 389 (441)
Q Consensus 333 ~a~~~~l~~~----~----~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~~-----------~ 389 (441)
.++.+++++. + + .++++.++.|+++++.+.+.|+++ |+.+..|++|+|+|++++ .. .
T Consensus 341 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~ 420 (481)
T PTZ00377 341 LMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAP 420 (481)
T ss_pred HHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCc
Confidence 9999998631 1 1 344555567899999999999988 899988889999998764 11 2
Q ss_pred hHHHHHHHHHhcCeEEeCCCCcCCC-CCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 390 SWDVFAEILEKTHILTIPGSGFGPG-GNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 390 ~~~~~~~ll~~~gi~v~pg~~f~~~-~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+.+++..+++++||.+.||+.|+.. +.+++||+++.+++++++++++|++++
T Consensus 421 ~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~ 473 (481)
T PTZ00377 421 DVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFH 473 (481)
T ss_pred HHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence 3456778888889999999999753 467999999877889999999998763
No 33
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5e-52 Score=412.86 Aligned_cols=348 Identities=21% Similarity=0.320 Sum_probs=278.4
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhcc-------CCCCCCCCCCCcCcHHHHHHHHHHHhh--h--CCCCCCcEEE
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALS-------TVKGYKGYGAEQGNMALRTAIADKFYK--D--MGIEGDEIFI 140 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~-------~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~--~~~~~~~I~~ 140 (441)
.++|+|+.+++.++. +.+.+.+........ .......|++..|.++||++||+|+.+ + ..+++++|++
T Consensus 38 ~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iii 116 (468)
T PLN02450 38 SGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVL 116 (468)
T ss_pred CeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEE
Confidence 468999999987654 555555544322100 012345688888999999999999975 3 3378999999
Q ss_pred cCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHH-HhccccccccccCccceeEEeecCCCCCccCCCCC-------
Q 013521 141 SDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSV-IVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST------- 211 (441)
Q Consensus 141 t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~------- 211 (441)
|+|+++++.+ +..+++|||.|++++|+|+++...+. ..| .+++.++++.++++.++.+.
T Consensus 117 t~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g------------~~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 117 TAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTG------------VEIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred ccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCC------------cEEEEEecCCccCCcCCHHHHHHHHHH
Confidence 9999999998 57778999999999999999988777 467 58899998766677654321
Q ss_pred ----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccC--------CCccee
Q 013521 212 ----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIP--------GAREVA 278 (441)
Q Consensus 212 ----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~--------~~~~~~ 278 (441)
..++++|++||||||||.++|.+++++|+++|++||++||+||+|+++.+++. +.++.... +..+++
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~v 264 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRV 264 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcE
Confidence 13789999999999999999999999999999999999999999999877642 33443321 135789
Q ss_pred EEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH--HHHHHHHHHHHH
Q 013521 279 IEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF--QALRTVIDYYKE 356 (441)
Q Consensus 279 i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~ 356 (441)
++++||||.||+||+|+||++++++.+ .+.+.... ....++.++|.++.++|++..+ .++++.++.+++
T Consensus 265 i~l~S~SK~~~l~GlRiG~li~~~~~l-------~~~~~~~~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~ 335 (468)
T PLN02450 265 HIVYSLSKDLGLPGFRVGAIYSNDEMV-------VSAATKMS--SFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQ 335 (468)
T ss_pred EEEEeccccCCCCCccEEEEEECCHHH-------HHHHHHHh--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999999987653 33343332 2334788999999999987654 368889999999
Q ss_pred HHHHHHHHHHhCCCeeeCCCCceEEEEEcCCC-------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-CHH
Q 013521 357 NAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGS-------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG-HRE 428 (441)
Q Consensus 357 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~ 428 (441)
+++.+.+.|+++|+.+.++.+|+|+|++++.. ...+++..+++++||.+.||+.|+..+++++||+++. +++
T Consensus 336 rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~ 415 (468)
T PLN02450 336 RQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEE 415 (468)
T ss_pred HHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHH
Confidence 99999999999999888888999999999621 1245778888888999999999987778999999985 889
Q ss_pred HHHHHHHHHHhhC
Q 013521 429 YISEACRRLKNFL 441 (441)
Q Consensus 429 ~~~~~l~~l~~~l 441 (441)
++++++++|++++
T Consensus 416 ~l~~~l~ri~~~l 428 (468)
T PLN02450 416 TLDLAMKRLKSFV 428 (468)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998763
No 34
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=4e-51 Score=402.15 Aligned_cols=352 Identities=21% Similarity=0.349 Sum_probs=285.0
Q ss_pred CCCCeEEeCCCCCC----CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCC
Q 013521 70 PDARLIRLGIGDTT----QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDG 143 (441)
Q Consensus 70 ~~~~~i~l~~g~~~----~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G 143 (441)
.++++|+|++|+|+ +++|+.+.+++.+++.. ....+|++..|..++|+++++|+.+ +.++++++|++|+|
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G 104 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQS----NKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSG 104 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhc----CCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCC
Confidence 45789999999998 78889999999988864 4556899999999999999999975 56688999999999
Q ss_pred cHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccE
Q 013521 144 AQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDI 217 (441)
Q Consensus 144 ~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~ 217 (441)
+++++.+ +..++++||+|++++|+|+.+...+...| .+++.+++++++++..+++. .+++++
T Consensus 105 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (409)
T PLN02656 105 CTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRH------------LEVRYVDLLPEKGWEVDLDAVEALADQNTVA 172 (409)
T ss_pred hHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcC------------CEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence 9999997 56678999999999999999988888888 58889998655555555432 357889
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
+++++||||||.++|.+++++|+++|++||++||+||+|.+|.+++. ..++..++ ..+++|+++||||.|++||+|+|
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~SfSK~f~~pGlRiG 251 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFG-SIVPVLTLGSLSKRWIVPGWRLG 251 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhc-ccCcEEEEcccchhccCcceeEE
Confidence 99999999999999999999999999999999999999999988753 34454453 24679999999999999999999
Q ss_pred EEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eeC
Q 013521 297 WTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLK-VNG 374 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 374 (441)
|++++++........+++.+...... ..+++.+.|.++.+++++....++++.++.++++++.+.+.|+++ ++. +..
T Consensus 252 ~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~ 330 (409)
T PLN02656 252 WFVTTDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHK 330 (409)
T ss_pred EEEEeCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcC
Confidence 99996320000000114555544333 345788999999999975445688999999999999999999987 333 346
Q ss_pred CCCceEEEEEcCC------CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 375 GKNAPYVWVQFPG------SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 375 ~~~~~~~~~~~~~------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
|.+|+|+|++++. .++.+++..+++++||.+.||+.|+. ++++||+++.+++++++++++|++++
T Consensus 331 p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~--~~~iRi~~~~~~e~l~eal~rl~~~~ 401 (409)
T PLN02656 331 PEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGL--KNWLRITFAADPSSLEEALGRIKSFY 401 (409)
T ss_pred CCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 7789999999861 13456777788888999999999963 68999999888999999999998763
No 35
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-51 Score=399.48 Aligned_cols=343 Identities=19% Similarity=0.289 Sum_probs=285.8
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~al 148 (441)
.++++|+.|.|+.+.|+.+++++.+.+. ....+|++..|..+||+++++|+.+ +.+++++ +|++|+|+++++
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~-----~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 100 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALL-----DGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEAL 100 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHH
Confidence 4689999999988878888888888765 3346798889999999999999975 5567888 999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
.+ +..++++||+|++++|+|+.+...++..| .+++.++++.+ ++..+++. .+++++++++|
T Consensus 101 ~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~l~~ 167 (387)
T PRK08912 101 AAALLALVEPGDEVVLFQPLYDAYLPLIRRAG------------GVPRLVRLEPP-HWRLPRAALAAAFSPRTKAVLLNN 167 (387)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHHHcC------------CEEEEEecCcc-cCcCCHHHHHHHhCccceEEEEeC
Confidence 87 57778999999999999999999999988 58888888643 33333222 35789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
||||||.++|.+++++|+++|++|+++||+||+|.++.+++. ..++..+++..+++++++||||.+|++|+|+||++++
T Consensus 168 p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 247 (387)
T PRK08912 168 PLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA 247 (387)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC
Confidence 999999999999999999999999999999999999887652 3455555544578999999999999999999999999
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEE
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYV 381 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 381 (441)
+++ .+.+.........+.+...|.++.+.+.. ..++++++++.++++++.+.+.|++.|+.+.++.+++|+
T Consensus 248 ~~~--------~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l 318 (387)
T PRK08912 248 PPL--------LRVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFL 318 (387)
T ss_pred HHH--------HHHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEE
Confidence 887 45565555444445677788888787763 346778999999999999999999999888887889999
Q ss_pred EEEcCC----CChHHHHHHHHHhcCeEEeCCCCcCC--CCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 382 WVQFPG----SSSWDVFAEILEKTHILTIPGSGFGP--GGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 382 ~~~~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
|++++. .++.++++.+++++||.+.||..|+. ...+++||+++.+++.+++++++|++++
T Consensus 319 ~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 319 TVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAAR 384 (387)
T ss_pred EecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 999973 35677888888888999999999953 3468999999888999999999998864
No 36
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=2.7e-51 Score=402.21 Aligned_cols=346 Identities=27% Similarity=0.475 Sum_probs=290.7
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~a 147 (441)
+.++++|+.|.|+.+.|+.+++++.+.+.. ....+|++..|..+||+++++|+.+ ++.++++ +|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~ 103 (395)
T PRK08175 28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQR----PDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG 103 (395)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----CCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 467999999999887788788888877643 3456899899999999999999975 5667777 89999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+++ +..+++|||+|++++|+|+.+...+...| .+++.++.+.++++..++++ .+++++++++
T Consensus 104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~ 171 (395)
T PRK08175 104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAG------------AQVRSVPLVEGVDFFNELERAIRESYPKPKMMILG 171 (395)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcC------------CeEEEEecccCCCcHHHHHHHHhhccCCceEEEEe
Confidence 997 56778999999999999999988888888 58889998876555444332 2478999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
+||||||.+++.+++++|+++|++||++||+||+|.++.+++. +.++..+++..+++++++||||.||+||+|+||+++
T Consensus 172 ~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~ 251 (395)
T PRK08175 172 FPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG 251 (395)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC
Confidence 9999999999999999999999999999999999999887653 445555544457789999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
++++ ++.+.........+++.+.|.++.+++.+ ...+++++++.++++++.+.+.|+++|+.+..+.+|+|
T Consensus 252 ~~~l--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~ 322 (395)
T PRK08175 252 NPEL--------VSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMY 322 (395)
T ss_pred CHHH--------HHHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEE
Confidence 8877 46666666555556777889888888864 35788999999999999999999998888777789999
Q ss_pred EEEEcCCC----ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 381 VWVQFPGS----SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 381 ~~~~~~~~----~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+|++++.. ++.+++.++++++||.|.||+.|+..+++++||+++.+.+.+++++++|++++
T Consensus 323 i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 323 VWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMF 387 (395)
T ss_pred EEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 99999842 35778888888889999999999876678999999878899999999998764
No 37
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=6.1e-51 Score=401.48 Aligned_cols=349 Identities=21% Similarity=0.356 Sum_probs=284.8
Q ss_pred CCCCCeEEeCCCCCC----CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhh--------CCCCCC
Q 013521 69 HPDARLIRLGIGDTT----QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKD--------MGIEGD 136 (441)
Q Consensus 69 ~~~~~~i~l~~g~~~----~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~--------~~~~~~ 136 (441)
..++++|+|+.|.|+ +.+++.+.+++.+.+.. ....+|++..|..+||++||+|+.+. ..++++
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~----~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~ 105 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS----QECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD 105 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc----CCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh
Confidence 356789999999986 45788899999887764 34568988889999999999999752 447899
Q ss_pred cEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC----
Q 013521 137 EIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST---- 211 (441)
Q Consensus 137 ~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~---- 211 (441)
+|++|+|+++++.+ +..++++||.|++++|+|+.+...++..| .+++.++++.++++..+++.
T Consensus 106 ~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~i~~~~~~~~~~d~~~l~~~ 173 (412)
T PTZ00433 106 NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYG------------IEMRFYNCRPEKDWEADLDEIRRL 173 (412)
T ss_pred hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcC------------CEEEEEecCccccCcCCHHHHHHH
Confidence 99999999999998 56778999999999999999999999999 58889988765444444332
Q ss_pred -CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccC
Q 013521 212 -TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAG 289 (441)
Q Consensus 212 -~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~ 289 (441)
..++++|+++|||||||.++|.+++++|+++|++||++||+||+|.+|.+++. ..++..++. ..++|+++||||.+|
T Consensus 174 ~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~~ 252 (412)
T PTZ00433 174 VDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDT-TVPRVILGGTAKNLV 252 (412)
T ss_pred hccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccC-CCceEEEccchhhcC
Confidence 25789999999999999999999999999999999999999999999887653 345555543 235799999999999
Q ss_pred CccceeEEEEee--ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 013521 290 FTGVRLGWTVVP--EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQS 367 (441)
Q Consensus 290 ~~G~r~G~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 367 (441)
+||+|+||++++ +... ..+++.+..... ...+++.+.|.++.+++.+....++++.++.++++++.+.+.|++
T Consensus 253 ~pGlRlG~~i~~~p~~~~----~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 327 (412)
T PTZ00433 253 VPGWRLGWLLLVDPHGNG----GDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGE 327 (412)
T ss_pred CCCeeEEEEEEeCCcccH----HHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999973 2110 001344444333 234588999999998997544478899999999999999999998
Q ss_pred C-CCeeeCCCCceEEEEEcCC------CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 368 L-GLKVNGGKNAPYVWVQFPG------SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 368 ~-g~~~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+ |+.+..+++|+|+|++++. .++.++++.+++++||.+.||+.|+. ++++||+++..++++++++++|.++
T Consensus 328 ~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~l~~al~~l~~~ 405 (412)
T PTZ00433 328 CIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHM--PGFTRLTISRPVEVLREAVERIKAF 405 (412)
T ss_pred CCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCC--CCeEEEEecCCHHHHHHHHHHHHHH
Confidence 6 7887778899999999863 14678888888777999999999964 5799999988888999999999876
Q ss_pred C
Q 013521 441 L 441 (441)
Q Consensus 441 l 441 (441)
+
T Consensus 406 ~ 406 (412)
T PTZ00433 406 C 406 (412)
T ss_pred H
Confidence 3
No 38
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=3.9e-51 Score=412.90 Aligned_cols=347 Identities=23% Similarity=0.380 Sum_probs=281.5
Q ss_pred CCCCeEEeCCCCC---CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh-h-CCCCCCcEEEcCCc
Q 013521 70 PDARLIRLGIGDT---TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK-D-MGIEGDEIFISDGA 144 (441)
Q Consensus 70 ~~~~~i~l~~g~~---~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~-~-~~~~~~~I~~t~G~ 144 (441)
.+.++|+|++|+| ++++|+.+++++.+++.. ..+|++..|..+||++||+|+.+ + .++++++|++|+|+
T Consensus 144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~------~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~ 217 (517)
T PRK13355 144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD------TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGV 217 (517)
T ss_pred cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc------CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcH
Confidence 3568999999988 466789999999887742 24699999999999999999965 2 35789999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEE
Q 013521 145 QSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDII 218 (441)
Q Consensus 145 ~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v 218 (441)
++++.+ +..++++||+|++++|+|+.|...+...| .+++.++++.+++|.++++. .+++++|
T Consensus 218 ~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g------------~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i 285 (517)
T PRK13355 218 SELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAG------------GTAVHYRCDEQSEWYPDIDDIRSKITSRTKAI 285 (517)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCC------------CEEEEeecCcccCCCCCHHHHHHhcCcCceEE
Confidence 999997 67788999999999999999999999998 58889998877677766543 3689999
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
++||||||||.+++.+++++|+++|++||++||+||+|.+|.+++. +.++..+.. ...+++++||||.+++||+|+||
T Consensus 286 ~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~-~~~vi~~~S~SK~~~~~G~RiG~ 364 (517)
T PRK13355 286 VIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAP-DLFCVTFSGLSKSHMIAGYRIGW 364 (517)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCC-CCeEEEEecchhhccCcccceEE
Confidence 9999999999999999999999999999999999999999988753 456666532 23578899999999999999999
Q ss_pred EEee--ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCc--HHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 013521 298 TVVP--EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDG--FQALRTVIDYYKENAKIIVDAFQSL-GLKV 372 (441)
Q Consensus 298 l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 372 (441)
++++ ++++. .+++.+... .....+++.++|.++.++|.+.. .+++...+. +.++++++.+.|+++ |+.+
T Consensus 365 ~i~~~~~~~~~----~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~-~~~~r~~l~~~L~~~~g~~~ 438 (517)
T PRK13355 365 MILSGNKRIAK----DYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGR-VYEQRELVYNALNAIPGISA 438 (517)
T ss_pred EEeeCchhhHH----HHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHH-HHHHHHHHHHHHhcCCCccc
Confidence 9965 33210 012223222 22334578899999999997432 245555444 445689999999988 8998
Q ss_pred eCCCCceEEEEEcCC-----CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 373 NGGKNAPYVWVQFPG-----SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 373 ~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
..|.+++|+|++++. .++.+++..+++++||.+.||+.|+..++++|||+++.+++++++++++|++++
T Consensus 439 ~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~ 512 (517)
T PRK13355 439 VKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMDRLADFF 512 (517)
T ss_pred CCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 888899999999863 246678888888899999999999866789999999888999999999998864
No 39
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-50 Score=397.46 Aligned_cols=344 Identities=26% Similarity=0.428 Sum_probs=289.9
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhh--CCCCCCcEEEcCCcHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKD--MGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~--~~~~~~~I~~t~G~~~al~ 149 (441)
+++++|+.|+|++++++.+.+++.+.+.+ ...+|++..|..++|+++|+|+.+. ..+++++|++|+|+++++.
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~ 98 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALAD-----GETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALM 98 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHH
Confidence 46899999999999899999999998763 3346988899999999999999764 4488999999999999999
Q ss_pred H-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCC-CCccCCCCC-----CCCccEEEEcC
Q 013521 150 R-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPE-NNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 150 ~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
+ +..++++||.|++++|+|+.+...++..| .+++.++.+.+ +++..+++. .++++++++++
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~ 166 (382)
T PRK06108 99 LAAQALVGPGDEVVAVTPLWPNLVAAPKILG------------ARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINS 166 (382)
T ss_pred HHHHHhcCCCCEEEEeCCCccchHHHHHHCC------------CEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEEC
Confidence 7 56778999999999999999999998888 58899998753 244444322 25789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC-C-CCCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD-P-SPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~-~-~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
||||||.++|.+++++|+++|+++|++||+||+|.++.++ + ...++..+.+..+++++++||||.||++|+|+||+++
T Consensus 167 p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~ 246 (382)
T PRK06108 167 PNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVA 246 (382)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeC
Confidence 9999999999999999999999999999999999998875 2 2234444433346899999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCce
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAP 379 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 379 (441)
++++ ++.+.........+++.+.|.++.+++.+ +.+++++++++++++++.+.+.|+++ |+.+..+.+|+
T Consensus 247 ~~~~--------~~~~~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~ 317 (382)
T PRK06108 247 PPAL--------GQVLEKLIEYNTSCVAQFVQRAAVAALDE-GEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAM 317 (382)
T ss_pred CHHH--------HHHHHHHHHhcccCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeE
Confidence 9877 45565555545566889999999999974 35678899999999999999999887 88888778899
Q ss_pred EEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 380 YVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 380 ~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
|+|++++. .++.+++.++++++||.+.||+.|++.+.+++||+++.+++++++++++|++++
T Consensus 318 ~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 318 YAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFL 380 (382)
T ss_pred EEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 99999974 356788888888889999999999766688999999778999999999998864
No 40
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=6.2e-51 Score=398.48 Aligned_cols=342 Identities=23% Similarity=0.300 Sum_probs=289.2
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCC--CCCC-cEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMG--IEGD-EIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~-~I~~t~G~~~al 148 (441)
.++++|+.|.|++++++.+.+++.+.+.. ...+|++..|..++|+++++++.+.++ .+++ +|++|+|+++++
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAA-----GHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHc-----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 46899999999988888899999887752 345798889999999999999976334 4554 899999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
.+ +..++++||+|++++|+|+.+...++..| .+++.++.+.+ ++..+++. .++++++++++
T Consensus 105 ~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~l~~ 171 (386)
T PRK09082 105 FAAILALVRPGDEVIVFDPSYDSYAPAIELAG------------GRAVRVALQPP-DFRVDWQRFAAAISPRTRLIILNT 171 (386)
T ss_pred HHHHHHHcCCCCEEEEeCCCchhhHHHHHHcC------------CEEEEEecCcc-cccCCHHHHHHhcCccceEEEEeC
Confidence 97 67778999999999999999999999888 58999998653 34444322 35789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
||||||.+++.+++++|+++|++||+++|+||+|.++.+++. +.++..+++..+++++++||||.+|+||+|+||++++
T Consensus 172 p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~ 251 (386)
T PRK09082 172 PHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP 251 (386)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC
Confidence 999999999999999999999999999999999999888653 4566666555678999999999999999999999999
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEE
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYV 381 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 381 (441)
+++ ++.+.........+++.+.|.++.+++.+ ...+++++++.++++++.+.+.|++.++++.++.+|+|+
T Consensus 252 ~~l--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~ 322 (386)
T PRK09082 252 AAL--------SAEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQ 322 (386)
T ss_pred HHH--------HHHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEE
Confidence 887 46666666555556899999988888863 346788899999999999999999988888888889999
Q ss_pred EEEcC---CCChHHHHHHHHHhcCeEEeCCCCcC--CCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 382 WVQFP---GSSSWDVFAEILEKTHILTIPGSGFG--PGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 382 ~~~~~---~~~~~~~~~~ll~~~gi~v~pg~~f~--~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
|++++ +.++.+++..+++++||.+.||+.|+ +.+.+++||+++.+++++++++++|+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~~ 386 (386)
T PRK09082 323 LVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQL 386 (386)
T ss_pred EEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence 99986 34677888888888899999999885 3456899999988899999999999863
No 41
>PRK07324 transaminase; Validated
Probab=100.00 E-value=4.8e-51 Score=396.75 Aligned_cols=336 Identities=21% Similarity=0.297 Sum_probs=287.0
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
+.++++|+.|+|+++.|+.+ +++.+++. ....+|++..|.++||++||+++. ++++++|++|+|+++++.+
T Consensus 25 ~~~~~~~~~~e~~~~~~~~~-~~~~~~~~-----~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~~~vi~t~G~~~al~~ 95 (373)
T PRK07324 25 ESCIDSLTLEELLALAGKNP-EAFYQELG-----QKKLTYGWIEGSPEFKEAVASLYQ---NVKPENILQTNGATGANFL 95 (373)
T ss_pred cCCCCCCcHHHHHhccCcch-HHHHHHHh-----cCCccCCCCCCCHHHHHHHHHHhc---CCChhhEEEcCChHHHHHH
Confidence 46799999999998888877 88888775 344589998999999999999973 4788999999999999997
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcCCC
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSPN 224 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p~ 224 (441)
+..++++||+|+++.|+|+.+...++..| .+++.++++.++++.++++. .+++|++++++||
T Consensus 96 ~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~ 163 (373)
T PRK07324 96 VLYALVEPGDHVISVYPTYQQLYDIPESLG------------AEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNAN 163 (373)
T ss_pred HHHHhCCCCCEEEEcCCCchhHHHHHHHcC------------CEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCC
Confidence 67788999999999999999999999898 58999999876666665432 3688999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
||||.++|.+++++|+++|++||++||+||+|.++.+++...++... .+++|+++||||.+|+||+|+||+++++++
T Consensus 164 NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~---~~~~I~~~s~SK~~~~~G~RiG~i~~~~~l 240 (373)
T PRK07324 164 NPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADL---YEKGISTNSMSKTYSLPGIRVGWIAANEEV 240 (373)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhc---cCCEEEEecchhhcCCccceeEEEecCHHH
Confidence 99999999999999999999999999999999998876544444443 457899999999999999999999998777
Q ss_pred cccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEE
Q 013521 305 RYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWV 383 (441)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 383 (441)
++.+...+.....+++.+.|.++..++++ ...+++++++.++++++.+.+.|++. ++.+..|.+|+|+|+
T Consensus 241 --------i~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i 311 (373)
T PRK07324 241 --------IDILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFV 311 (373)
T ss_pred --------HHHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEE
Confidence 56677766655566788999988888863 34678899999999999999999887 777777788898888
Q ss_pred EcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 384 QFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 384 ~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+++ +.++.+++.++++++||.+.||+.|+. ++++||+++.+++.+++++++|++++
T Consensus 312 ~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~--~~~iRis~~~~~~~l~~~l~rl~~~l 368 (373)
T PRK07324 312 KLDVDMPSEDFCLKLLKETGVLLVPGNRFDL--EGHVRIGYCCDTETLKKGLKKLSEFL 368 (373)
T ss_pred EeCCCCCHHHHHHHHHHhcCEEEECccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 887 456788999999888999999999964 57999999888999999999998864
No 42
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-50 Score=397.71 Aligned_cols=343 Identities=29% Similarity=0.460 Sum_probs=290.7
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al~ 149 (441)
.++++|+.|+|++++++.+.+++.+.+. ....+|.+..|..+||+++|+++.+ +.++++++|++|+|+++++.
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 107 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALD-----EGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATY 107 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHH
Confidence 3689999999998888888999888765 3345798889999999999999975 55688999999999999999
Q ss_pred H-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcCC
Q 013521 150 R-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSP 223 (441)
Q Consensus 150 ~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p 223 (441)
+ +..++++||.|++++|+|+++...+...| .+++.++++.++++..+++. .++++++++++|
T Consensus 108 ~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p 175 (391)
T PRK08361 108 LAFESLLEEGDEVIIPDPAFVCYVEDAKIAE------------AKPIRIPLREENEFQPDPDELLELITKRTRMIVINYP 175 (391)
T ss_pred HHHHHhcCCCCEEEEcCCCCcccHHHHHHcC------------CEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCC
Confidence 7 56778999999999999999999888888 58999999876555555332 357899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
|||||.++|.+++++|+++|++++++||+||+|.++.+++. ..++..+ ..+++++++||||.+|++|+|+||+++++
T Consensus 176 ~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~~~ 253 (391)
T PRK08361 176 NNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIAPE 253 (391)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhccCH
Confidence 99999999999999999999999999999999999887542 3344444 24678999999999999999999999998
Q ss_pred cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceE
Q 013521 303 ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPY 380 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 380 (441)
++ ++.+.........+++.+.|.++..++.+... .++++.++.++++++.+.+.|+++ ++.+.++++|+|
T Consensus 254 ~~--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~ 325 (391)
T PRK08361 254 QV--------IKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFY 325 (391)
T ss_pred HH--------HHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEE
Confidence 77 35555555544556788999999999986543 678999999999999999999987 888888888999
Q ss_pred EEEEcCC--CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 381 VWVQFPG--SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 381 ~~~~~~~--~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+|++++. .++.+++..+++++||.+.||+.|+..++++|||+++.+++++++++++|++++
T Consensus 326 ~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l 388 (391)
T PRK08361 326 VFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKAL 388 (391)
T ss_pred EEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999973 467888888887789999999999876778999999888889999999998764
No 43
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.9e-50 Score=390.12 Aligned_cols=336 Identities=25% Similarity=0.417 Sum_probs=280.6
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHHHHH
Q 013521 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSDISR 150 (441)
Q Consensus 74 ~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~al~~ 150 (441)
+++|+.|.|++++++.+.+++.+... ...+|+++.|..+||+++++|+.+ +++++++ +|++|+|+++++..
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~ 75 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVP------EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH 75 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHh------ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 68999999998888888888888642 345798889999999999999975 5667887 99999999999998
Q ss_pred -HHHhcCCC---CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 151 -LQMLLGSN---VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 151 -l~~l~~~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+..++++| |+|+++.|+|+.+...++..| .+++.++++.++++..+++. ..++++++++
T Consensus 76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~ 143 (350)
T TIGR03537 76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAG------------GEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWIN 143 (350)
T ss_pred HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcC------------CEEEEcccCcccCCccCHHHHHHhhhhccEEEEEe
Confidence 56677877 699999999999999999999 68999998755566544322 3578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
+||||||.+++.+++++|+++|++||++||+||+|.++.++..+.++..+ ..+++|+++||||.+|++|+|+||++++
T Consensus 144 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~~ 221 (350)
T TIGR03537 144 YPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAGD 221 (350)
T ss_pred CCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhc--CcCCEEEEeecccccCCccccceeeecC
Confidence 99999999999999999999999999999999999988766544455544 2468999999999999999999999998
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEE
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYV 381 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 381 (441)
+++ .+.+.........+.+.+.|.++.+.+.+ ..++++.++.++++++.+.+.|++.|+++.++.+|+|+
T Consensus 222 ~~~--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~ 291 (350)
T TIGR03537 222 EKL--------ISFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYL 291 (350)
T ss_pred HHH--------HHHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEE
Confidence 777 45566555544445666788877777763 35678889999999999999999989888887789999
Q ss_pred EEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 382 WVQFPG-SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 382 ~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
|++++. .++.++++.|++ +||.+.||+.|+...++++||+++.+++++++++++|+++
T Consensus 292 ~~~~~~~~~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~~ 350 (350)
T TIGR03537 292 WVKVPSGIDAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWERV 350 (350)
T ss_pred EEECCCCCCHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhcC
Confidence 999984 366778888776 5999999999976667899999877889999999999863
No 44
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-50 Score=396.96 Aligned_cols=343 Identities=23% Similarity=0.357 Sum_probs=288.1
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al 148 (441)
+.++++|+.|.|+.++++.+.+++.+.+.. ...+|++..|..+||+++++++.+ +..+++++|++|+|+++|+
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 106 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIER-----GETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAI 106 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 457999999999988889899999988763 345799999999999999999976 4556889999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
.+ +..++++||.|++++|+|+.|...+...+ ..++.++.+.++++..+++. .+++++++++|
T Consensus 107 ~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~------------~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~ 174 (402)
T PRK06107 107 FLALMATLEAGDEVIIPAPYWVSYPDMVLAND------------GTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNA 174 (402)
T ss_pred HHHHHHhcCCCCEEEEecCCCcCHHHHHHHcC------------CEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEEC
Confidence 97 56778999999999999999988777776 36677777654555544322 35788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHc-CcEEEEcccccccccCCC-CCcccccC-CCcceeEEEecCCcccCCccceeEEEE
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKAN-GSIIVYDSAYAAYITDPS-PRSIYEIP-GAREVAIEISSFSKFAGFTGVRLGWTV 299 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~~~~~~~~~~-~~~~~~~~-~~~~~~i~i~S~SK~~~~~G~r~G~l~ 299 (441)
||||||.++|.+++++|+++|++| +++||+||+|+++.+++. ..++..+. +..+++++++||||.|++||+|+||++
T Consensus 175 p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~ 254 (402)
T PRK06107 175 PSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAA 254 (402)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeee
Confidence 999999999999999999999998 999999999999887653 34555542 234689999999999999999999999
Q ss_pred eeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCc
Q 013521 300 VPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNA 378 (441)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 378 (441)
+++++ ++.+.........+++.+.|.++..++.+ +..++++.++.++++++.+.+.|+++ |+.+.++++|
T Consensus 255 ~~~~~--------~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg 325 (402)
T PRK06107 255 GPADL--------IAAINKLQSQSSSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGA 325 (402)
T ss_pred cCHHH--------HHHHHHHHHhcccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcc
Confidence 99887 46677666665667899999999999974 35688999999999999999999987 8888888899
Q ss_pred eEEEEEcCC------------CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 379 PYVWVQFPG------------SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 379 ~~~~~~~~~------------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+|+|++++. .++.+++.++++++||.+.||+.|+. .+++||+++.+.+++++++++|++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~~~~e~l~~~l~~l~~~l 398 (402)
T PRK06107 326 FYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIATSLETLEEACARIERAV 398 (402)
T ss_pred eEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 999999731 14567888888888999999999964 57999999889999999999998763
No 45
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.1e-51 Score=405.34 Aligned_cols=349 Identities=18% Similarity=0.274 Sum_probs=277.2
Q ss_pred CCeEEeCCCCCCC--CC-cHHHHHHHHHHHhh---ccCCCCCCCCCCCcCcHHHHHHHHHHHhhh----CCCCCCcEEEc
Q 013521 72 ARLIRLGIGDTTQ--PI-PDIITSAMAEHAFA---LSTVKGYKGYGAEQGNMALRTAIADKFYKD----MGIEGDEIFIS 141 (441)
Q Consensus 72 ~~~i~l~~g~~~~--~~-~~~~~~al~~~~~~---~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~----~~~~~~~I~~t 141 (441)
.++|+|+.+++.+ .. ++++.+.....+.. +........|++..|.++||++||+|+.+. ..+++++|++|
T Consensus 46 ~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit 125 (496)
T PLN02376 46 HGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMS 125 (496)
T ss_pred CceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEc
Confidence 3699999999865 22 44444433332211 111234456888899999999999999763 34889999999
Q ss_pred CCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHH-hccccccccccCccceeEEeecCCCCCccCCCCC--------
Q 013521 142 DGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVI-VGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-------- 211 (441)
Q Consensus 142 ~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-------- 211 (441)
+|+++++.+ +..+++|||.|++++|+|+++...+.. .| .+++.++++.++++..+++.
T Consensus 126 ~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G------------~~vv~v~~~~~~~~~~~~~~le~a~~~a 193 (496)
T PLN02376 126 GGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTG------------VEIIPVPCSSSDNFKLTVDAADWAYKKA 193 (496)
T ss_pred cchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCC------------CEEEEEeCCCCccCcCCHHHHHHHHHHH
Confidence 999999998 577889999999999999999887774 67 58999999755555444321
Q ss_pred ---CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCcccccCC-------CcceeEE
Q 013521 212 ---TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP-SPRSIYEIPG-------AREVAIE 280 (441)
Q Consensus 212 ---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~-~~~~~~~~~~-------~~~~~i~ 280 (441)
..++|+|++||||||||.++|.+++++|+++|++|+++||+||+|.++.+++ .+.++.++.. .++++++
T Consensus 194 ~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~v 273 (496)
T PLN02376 194 QESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHI 273 (496)
T ss_pred HhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEE
Confidence 2478999999999999999999999999999999999999999999988765 3456655421 1246788
Q ss_pred EecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH--HHHHHHHHHHHHHH
Q 013521 281 ISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF--QALRTVIDYYKENA 358 (441)
Q Consensus 281 i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~ 358 (441)
++||||.||+||+|+||++++++.+ .+.+.... ....++.++|.++.+++.+..+ .++++.++.+++++
T Consensus 274 v~S~SK~~glpGlRvG~li~~~~~l-------~~~~~~~~--~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~ 344 (496)
T PLN02376 274 VYSLSKDMGLPGFRVGIVYSFNDSV-------VSCARKMS--SFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRH 344 (496)
T ss_pred EEeccccCCCCcceEEEEEECCHHH-------HHHHHHHh--hcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999976653 33333222 2334789999999999987655 57888899999999
Q ss_pred HHHHHHHHhCCCeeeCCCCceEEEEEcCCC--------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-CHHH
Q 013521 359 KIIVDAFQSLGLKVNGGKNAPYVWVQFPGS--------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG-HREY 429 (441)
Q Consensus 359 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~~ 429 (441)
+.+.+.|++.|+.+.++.+|+|+|++++.. .+.++.+.++++.||.+.||+.|+..+++|+||+|+. +++.
T Consensus 345 ~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~ 424 (496)
T PLN02376 345 KVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDT 424 (496)
T ss_pred HHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHH
Confidence 999999999899888888899999999631 1256778888888999999999987678999999975 7899
Q ss_pred HHHHHHHHHhhC
Q 013521 430 ISEACRRLKNFL 441 (441)
Q Consensus 430 ~~~~l~~l~~~l 441 (441)
+++++++|++++
T Consensus 425 l~~al~rl~~~l 436 (496)
T PLN02376 425 LHVALGRIQDFV 436 (496)
T ss_pred HHHHHHHHHHHH
Confidence 999999998763
No 46
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=2.8e-50 Score=396.07 Aligned_cols=348 Identities=22% Similarity=0.360 Sum_probs=283.6
Q ss_pred CCCCeEEeCCCCCC----CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh-hCCCCCCcEEEcCCc
Q 013521 70 PDARLIRLGIGDTT----QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK-DMGIEGDEIFISDGA 144 (441)
Q Consensus 70 ~~~~~i~l~~g~~~----~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~-~~~~~~~~I~~t~G~ 144 (441)
+++++++|+.|+|+ +++++.+.+++.+.+.. ....+|++..|..+||+++|+|+.+ +..+++++|++|+|+
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~ 104 (401)
T TIGR01264 29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDS----GKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGC 104 (401)
T ss_pred cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhc----cCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcCh
Confidence 34678999999985 67888999999887764 3455798899999999999999975 445789999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEE
Q 013521 145 QSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDII 218 (441)
Q Consensus 145 ~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v 218 (441)
++++.+ +..++++||+|++++|+|+.+...+...| .+++.++++.++++..+++. ..+++++
T Consensus 105 ~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g------------~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 172 (401)
T TIGR01264 105 SHAIEMCIAALANAGQNILVPRPGFPLYETLAESMG------------IEVKLYNLLPDKSWEIDLKQLESLIDEKTAAL 172 (401)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcC------------CEEEEeecCCccCCCCCHHHHHHHhccCceEE
Confidence 999998 57778999999999999999999999998 58888888655444444332 2568999
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
+++|||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. ..++..++. ..++|+++||||.|++||+|+||
T Consensus 173 ~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~ 251 (401)
T TIGR01264 173 IVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSS-TVPILSCGGLAKRWLVPGWRLGW 251 (401)
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCC-CCcEEEEccCcccCCCccceEEE
Confidence 9999999999999999999999999999999999999999987653 345555542 23589999999999999999999
Q ss_pred EEeecc--ccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeC
Q 013521 298 TVVPEE--LRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNG 374 (441)
Q Consensus 298 l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 374 (441)
+++++. .+ ....+.+..... ...+++.+.|.++.+++.+....++++.++.++++++.+.+.|+++ |+.+..
T Consensus 252 iv~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 326 (401)
T TIGR01264 252 IIIHDRRGIL----RDIRDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVM 326 (401)
T ss_pred EEecCcchhH----HHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence 999852 11 001233333222 2345788999999999975445788999999999999999999988 777767
Q ss_pred CCCceEEEEEcCC------CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 375 GKNAPYVWVQFPG------SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 375 ~~~~~~~~~~~~~------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
|++|+|+|++++. .++.+++..+++++||.+.||+.|+. ++++||+++.+++++++++++|.+++
T Consensus 327 p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~--~~~iRis~~~~~~~l~~~l~rl~~~~ 397 (401)
T TIGR01264 327 PSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEY--PGFFRVVLTVPVVMMEEACSRIQEFC 397 (401)
T ss_pred CCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCC--CCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 7899999999752 24677888888778999999999863 67999999888899999999998764
No 47
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=4.4e-50 Score=392.93 Aligned_cols=341 Identities=24% Similarity=0.391 Sum_probs=283.6
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCC-CCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIE-GDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~-~~~I~~t~G~~~al 148 (441)
+++++|+.|.|++++++.+.+++.+.+. .....|++..|..++|+++++|+.+ +..++ +++|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al 104 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAID-----ANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEAL 104 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 4699999999998888888888888775 2334698889999999999999975 44455 47999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--------CCCccEEE
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--------TSRTDIIF 219 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--------~~~~~~v~ 219 (441)
.+ +..++++||+|++++|+|+++..+++..| .+++.++.+.+ ++..+.+. .+++++++
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~~~i~ 171 (391)
T PRK07309 105 SASLTAILEPGDKVLLPAPAYPGYEPIVNLVG------------AEIVEIDTTEN-DFVLTPEMLEKAILEQGDKLKAVI 171 (391)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcchHHHHHHcC------------CEEEEEecCCc-CCcCCHHHHHHHhhccCCCeEEEE
Confidence 98 67778999999999999999999999888 58888887643 33333221 13689999
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEE
Q 013521 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298 (441)
Q Consensus 220 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l 298 (441)
+++||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++..+ .++++++++||||.||+||+|+||+
T Consensus 172 l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRvG~~ 249 (391)
T PRK07309 172 LNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY--LPDQTILINGLSKSHAMTGWRIGLI 249 (391)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh--ccCCEEEEecChhhccCccceeEEE
Confidence 999999999999999999999999999999999999999988543 3455554 2478999999999999999999999
Q ss_pred EeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCc
Q 013521 299 VVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNA 378 (441)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 378 (441)
+++++++ +.+.........+++.++|.++.+++.+. ..+....++.++++++.+.+.|+++|+.+..+.+|
T Consensus 250 v~~~~~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg 320 (391)
T PRK07309 250 FAPAEFT--------AQLIKSHQYLVTAATTMAQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGA 320 (391)
T ss_pred EeCHHHH--------HHHHHHHhhcccCCChHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCee
Confidence 9998874 55555444444567889999999998753 33346778899999999999999989988888889
Q ss_pred eEEEEEcCCC---ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 379 PYVWVQFPGS---SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 379 ~~~~~~~~~~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+|+|++++.. ++.+++.++++++||.+.||+.|+..++++|||+++.+.+++++++++|++++
T Consensus 321 ~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~ 386 (391)
T PRK07309 321 FYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYM 386 (391)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999999732 45678888888889999999999877789999999878899999999998763
No 48
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9e-50 Score=390.47 Aligned_cols=344 Identities=21% Similarity=0.312 Sum_probs=283.5
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCC--CC-CCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMG--IE-GDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~-~~~I~~t~G~~~al 148 (441)
.+.++|+.|.+++++|+.+.+++.+.+.. .....|++..|..++|+++++++.+..+ ++ +++|++|+|+++++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l 102 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLAN----PENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAF 102 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHH
Confidence 36899999999988899999999987754 3345798899999999999999976444 45 67999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPN 224 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~ 224 (441)
.. +..++++||.|++++|+|+.+...++..| .+++.++.+.+.+++.+ ++. .+++++|++++||
T Consensus 103 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~ 170 (389)
T PRK05957 103 MNAILAITDPGDEIILNTPYYFNHEMAITMAG------------CQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPN 170 (389)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcC------------CEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCC
Confidence 87 56778999999999999999988888788 58888887643232222 222 3579999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC-CcccccCCCcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSP-RSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
||||.++|.+++++|+++|++||++||+||+|.++.+++.+ .++..+.+..+++|+++||||.+|+||+|+||++++++
T Consensus 171 NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 250 (389)
T PRK05957 171 NPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIH 250 (389)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHH
Confidence 99999999999999999999999999999999999876432 24444433456899999999999999999999999988
Q ss_pred ccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eeeCCCCceEE
Q 013521 304 LRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GL-KVNGGKNAPYV 381 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~ 381 (441)
+ ++++.........+++.+.|.++..++++ +..++++.++.++++++.+.+.|+++ ++ .+.++.+|+|+
T Consensus 251 ~--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~ 321 (389)
T PRK05957 251 L--------LEAIKKIQDTILICPPVVSQYAALGALQV-GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYC 321 (389)
T ss_pred H--------HHHHHHHHhhcccCCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEE
Confidence 7 46676666555556788899998888874 33567888888999999999999887 53 66677789999
Q ss_pred EEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-CHHHHHHHHHHHHhh
Q 013521 382 WVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG-HREYISEACRRLKNF 440 (441)
Q Consensus 382 ~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~~~~~~l~~l~~~ 440 (441)
|++++ +.++.++++++++++||.+.||+.|+....+++||+++. +++++++++++|.+.
T Consensus 322 ~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~ 382 (389)
T PRK05957 322 FLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQG 382 (389)
T ss_pred EEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHH
Confidence 99997 556788999998878999999999976667799999964 788999999999875
No 49
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.4e-49 Score=390.76 Aligned_cols=343 Identities=23% Similarity=0.352 Sum_probs=281.1
Q ss_pred CCCeEEeCCCCC---CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcH
Q 013521 71 DARLIRLGIGDT---TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQ 145 (441)
Q Consensus 71 ~~~~i~l~~g~~---~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~ 145 (441)
+.++++|+.|.| ++++++.+.+++.+.+.. ....|++..|..+||+++|+|+.+ +.++++++|++|+|++
T Consensus 29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 103 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKE-----GHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVT 103 (398)
T ss_pred CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHc-----CCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHH
Confidence 468999999998 677889999999987763 234688889999999999999975 5668999999999999
Q ss_pred HHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEe-ecCCCCCccCCCCC-----CCCccEE
Q 013521 146 SDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYM-NCRPENNFFPDLST-----TSRTDII 218 (441)
Q Consensus 146 ~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v-~~~~~~~~~~~~~~-----~~~~~~v 218 (441)
+++.+ +..++++||.|++++|+|+++...+...| .+++.+ +.++ +++..+++. .++++++
T Consensus 104 ~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~v~~~~~~~-~~~~~d~~~l~~~~~~~~~~v 170 (398)
T PRK08363 104 EALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYG------------GVPVEYRTIEE-EGWQPDIDDIRKKITEKTKAI 170 (398)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcC------------CEEEEeccccc-cCCcCCHHHHHhhCCcceEEE
Confidence 99998 56778999999999999999999888888 466666 4433 344444321 3578999
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l 298 (441)
+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++.+.++..++. .+++++++||||.|++||+|+||+
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~~ 249 (398)
T PRK08363 171 AVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTK-DVPVIVMNGLSKVYFATGWRLGYI 249 (398)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCc-CCcEEEEecchhccCCccceEEEE
Confidence 9999999999999999999999999999999999999999887665555555543 357999999999998999999999
Q ss_pred Ee--eccccccCCchhHHHHHHHHh---hhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 013521 299 VV--PEELRYSNGYPVIKDFNRIVC---TCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKV 372 (441)
Q Consensus 299 ~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 372 (441)
++ +++++ +.+..... ....+++.++|.++.+++.+ ..+++++.++.++++++.+.+.|.++ ++.+
T Consensus 250 ~~~~~~~~~--------~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 320 (398)
T PRK08363 250 YFVDPEGKL--------AEVREAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIST 320 (398)
T ss_pred EEeCcHHHH--------HHHHHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence 98 55542 22222211 11245788999999988874 35788999999999999999999887 7888
Q ss_pred eCCCCceEEEEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 373 NGGKNAPYVWVQFPG---SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 373 ~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
..+.+|+|+|++++. .++.+++..+++++||.+.||+.|+..+++++||+++.+++++++++++|++++
T Consensus 321 ~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 392 (398)
T PRK08363 321 TKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFM 392 (398)
T ss_pred cCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 777889999999874 245677778888889999999999766678999999878899999999998753
No 50
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-49 Score=386.52 Aligned_cols=345 Identities=25% Similarity=0.345 Sum_probs=287.5
Q ss_pred CCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHH
Q 013521 70 PDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~a 147 (441)
.+.+.++|+.|+|+.++++.+.+++.+.+.. ....+|++..|.++||+++++++.+ +..+++++|++|+|++++
T Consensus 27 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 102 (386)
T PRK07550 27 ADGPLIDLSQAVPGYPPPPELLRALAEAAAD----PAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQA 102 (386)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----cCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence 3567999999999888888899998887742 4456798889999999999999975 556789999999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEc
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~ 221 (441)
+.+ +..++++||+|++++|+|+.+...++..| .+++.++.++++++.++.+. ..++++++++
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~ 170 (386)
T PRK07550 103 FWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLG------------IRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALV 170 (386)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcC------------CEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEe
Confidence 998 56678999999999999999998888888 68999999765566555322 3578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
+||||||.++|.+++++|+++|++||++||+||+|.+|.++.. +.++....+.++++++++||||.+|+||+|+||+++
T Consensus 171 ~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~ 250 (386)
T PRK07550 171 TPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVA 250 (386)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeec
Confidence 9999999999999999999999999999999999998876432 333433322356799999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCce
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAP 379 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 379 (441)
++++ ++.+.........+++.++|.++..++.+ ..+++++.++.++++++.+.+.|+++ ++.+. +.+|+
T Consensus 251 ~~~~--------~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~ 320 (386)
T PRK07550 251 SPAR--------IAEIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFARLPGWELL-ASGAY 320 (386)
T ss_pred CHHH--------HHHHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-CCceE
Confidence 8877 45566655555556788999999888874 23678889999999999999999986 66554 46889
Q ss_pred EEEEEcC--CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-CHHHHHHHHHHHHhh
Q 013521 380 YVWVQFP--GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG-HREYISEACRRLKNF 440 (441)
Q Consensus 380 ~~~~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~~~~~~l~~l~~~ 440 (441)
|+|++++ +.++.+++..+++++||.+.||+.|+..+++++||+++. +++++++++++|+++
T Consensus 321 ~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 321 FAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred EEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 9999997 346788888888888999999999976667899999975 789999999999875
No 51
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.2e-49 Score=392.84 Aligned_cols=348 Identities=20% Similarity=0.313 Sum_probs=277.5
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhc-------cCCCCCCCCCCCcCcHHHHHHHHHHHhhhC----CCCCCcEEE
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFAL-------STVKGYKGYGAEQGNMALRTAIADKFYKDM----GIEGDEIFI 140 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~-------~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~----~~~~~~I~~ 140 (441)
.++|+|+..++.+ ..+.+.+.+.+..... ........|++..|..+||+++|+|+.+.+ .+++++|++
T Consensus 47 ~g~i~l~~aeN~l-~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivi 125 (447)
T PLN02607 47 SGVIQMGLAENQV-SFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVL 125 (447)
T ss_pred CceEEEechhhhh-hHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEE
Confidence 4699999999754 4455666665543210 011233458788899999999999997632 478999999
Q ss_pred cCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHH-hccccccccccCccceeEEeecCCCCCccCCCCC-------
Q 013521 141 SDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVI-VGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST------- 211 (441)
Q Consensus 141 t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~------- 211 (441)
|+|+++++.+ +..+++|||.|++++|+|+++...+.. .| .++++++.+.+++|..+.+.
T Consensus 126 t~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g------------~~vv~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG------------VKIVPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCC------------cEEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence 9999999998 567789999999999999999877764 55 58889988766666544322
Q ss_pred ----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccC------CCcceeEE
Q 013521 212 ----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIP------GAREVAIE 280 (441)
Q Consensus 212 ----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~------~~~~~~i~ 280 (441)
..++|+++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++.++. +.++++++
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~v 273 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHI 273 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEE
Confidence 24789999999999999999999999999999999999999999998877643 45655431 22578999
Q ss_pred EecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH--HHHHHHHHHHHHHH
Q 013521 281 ISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF--QALRTVIDYYKENA 358 (441)
Q Consensus 281 i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~ 358 (441)
++||||.||++|+|+||+++.++.+ .+.+... ..+..+|.++|.++.++|.+..+ .++...++++++++
T Consensus 274 i~s~SK~fg~~GlRvG~ivs~n~~l-------~~~~~~~--~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~ 344 (447)
T PLN02607 274 VYSLSKDLGLPGFRVGTIYSYNDKV-------VTTARRM--SSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRY 344 (447)
T ss_pred EEcchhcCCCCcceEEEEEEcCHHH-------HHHHHHH--hhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999854432 2333322 22334788899999999997655 57888999999999
Q ss_pred HHHHHHHHhCCCeeeCCCCceEEEEEcCCC-------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-CHHHH
Q 013521 359 KIIVDAFQSLGLKVNGGKNAPYVWVQFPGS-------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG-HREYI 430 (441)
Q Consensus 359 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~~~ 430 (441)
+.+.+.|++.|+.+.++.+|+|+|++++.. .+.+++.++++++||.+.||+.|+...++|+||+|+. +++.+
T Consensus 345 ~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l 424 (447)
T PLN02607 345 EMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTL 424 (447)
T ss_pred HHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHH
Confidence 999999999999888888999999999631 1235677888878999999999987778999999986 88999
Q ss_pred HHHHHHHHhhC
Q 013521 431 SEACRRLKNFL 441 (441)
Q Consensus 431 ~~~l~~l~~~l 441 (441)
+++++||.+++
T Consensus 425 ~~gl~Ri~~~l 435 (447)
T PLN02607 425 EVALKRIHRFM 435 (447)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 52
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=7.2e-49 Score=386.19 Aligned_cols=349 Identities=23% Similarity=0.372 Sum_probs=275.1
Q ss_pred CCCCCeEEeCCCCC---CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh-hC-CCCCCcEEEcCC
Q 013521 69 HPDARLIRLGIGDT---TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK-DM-GIEGDEIFISDG 143 (441)
Q Consensus 69 ~~~~~~i~l~~g~~---~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~-~~-~~~~~~I~~t~G 143 (441)
+++.++++|+.|.| ++++++.+.+++.+.+. ...+|+++.|..+||+++|+|+.+ +. ++++++|++|+|
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G 103 (404)
T PRK09265 30 EEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLP------TAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNG 103 (404)
T ss_pred HcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhh------cCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCC
Confidence 35668999999987 45678888888887653 235799899999999999999965 33 789999999999
Q ss_pred cHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccE
Q 013521 144 AQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDI 217 (441)
Q Consensus 144 ~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~ 217 (441)
+++++.+ +..++++||+|++++|+|+.+...+...| .+++.++.+.++++..+.+. .+++++
T Consensus 104 ~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~ 171 (404)
T PRK09265 104 VSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSG------------GKPVHYLCDEEAGWFPDLDDIRSKITPRTKA 171 (404)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcC------------CEEEEEecccccCCCCCHHHHHHhccccceE
Confidence 9999987 56778999999999999999999988888 47777777654455444322 357899
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
|+++|||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++..++. ..++++++||||.+|+||+|+|
T Consensus 172 v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG 250 (404)
T PRK09265 172 IVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAP-DLLCVTFNGLSKAYRVAGFRVG 250 (404)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCC-CceEEEEecchhhccCcccceE
Confidence 99999999999999999999999999999999999999999887653 445655532 3478999999999999999999
Q ss_pred EEEeec--cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 013521 297 WTVVPE--ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSL-GLKV 372 (441)
Q Consensus 297 ~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 372 (441)
|++++. ... ..+++.+... .....+++.++|.++.++|.+... ..+.+.++.++++++.+.+.|+++ |+.+
T Consensus 251 ~~v~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~ 325 (404)
T PRK09265 251 WMVLSGPKKHA----KGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSC 325 (404)
T ss_pred EEEEeCchHHH----HHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999742 211 0012223222 223345788999999999864322 222233356778899999999887 8888
Q ss_pred eCCCCceEEEEEcCCC-----ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 373 NGGKNAPYVWVQFPGS-----SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 373 ~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
..+.+|+|+|++++.. ++.+++..+++++||.+.||+.|+..+++++|++++.+++++++++++|++++
T Consensus 326 ~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l 399 (404)
T PRK09265 326 VKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFL 399 (404)
T ss_pred cCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 8888999999999732 35566777788889999999999765678999999778999999999998763
No 53
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=5.3e-49 Score=385.33 Aligned_cols=343 Identities=22% Similarity=0.312 Sum_probs=283.2
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~~~al 148 (441)
.++++|+.|.|+.+.|+.+.+++.+.+. ....+|++..|..++|+++++|+.+ +..++++ +|++|+|+++++
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 98 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIA-----GGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAI 98 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHH
Confidence 3689999999988777778888777665 2346798889999999999999865 4455665 799999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCC-CccCCCCC-----CCCccEEEEc
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN-NFFPDLST-----TSRTDIIFFC 221 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~~-----~~~~~~v~i~ 221 (441)
.+ +..++++||.|+++.|+|+.+..++...| .+++.++.++++ ++..+++. .+++++|+++
T Consensus 99 ~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~ 166 (387)
T PRK07777 99 AAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAG------------AHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVN 166 (387)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHHHCC------------CEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEc
Confidence 97 67778999999999999999999988888 478888887652 44444332 3578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
+||||||.++|.+++++|+++|++|++++|+||+|.++.+++. +.++..+++..+++++++||||.||+||+|+||+++
T Consensus 167 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~ 246 (387)
T PRK07777 167 SPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACG 246 (387)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEec
Confidence 9999999999999999999999999999999999999887543 345555554457899999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
++++ .+.+...........+.+.|.++..++.+ ...+++++++.++++++.+.+.|++.++++.++++++|
T Consensus 247 ~~~l--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~ 317 (387)
T PRK07777 247 PAPL--------IAAVRAAKQYLTYVGGAPFQPAVAHALDH-EDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYF 317 (387)
T ss_pred CHHH--------HHHHHHHHhhcccCCCCHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceE
Confidence 9887 45555555444444677788888888864 34678899999999999999999998888888888999
Q ss_pred EEEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCC---CCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 381 VWVQFPG---SSSWDVFAEILEKTHILTIPGSGFGP---GGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 381 ~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+|++++. .++.++++.+++++||.|.||+.|+. .++++|||+++.+++++++++++|+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~ 383 (387)
T PRK07777 318 LCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRAL 383 (387)
T ss_pred EEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 9999752 35678889988888999999999863 235799999988899999999999875
No 54
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-49 Score=392.44 Aligned_cols=359 Identities=19% Similarity=0.311 Sum_probs=275.3
Q ss_pred HHHHHHHHHhcCCC-------CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHh-h
Q 013521 58 ISMRESEHIRKHPD-------ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFY-K 129 (441)
Q Consensus 58 ~~~~~~~~~~~~~~-------~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~-~ 129 (441)
+.+|......++.+ .++|+|++|+|++++|+.+.+ +.+++. . .+|+++.|..++|++|++++. +
T Consensus 79 ~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~~~~~~~v~e-~~~~~~-----~--~~Y~~~~g~~~lreaia~~~~~~ 150 (527)
T PRK09275 79 IEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLGFDADEFVYE-LVDGII-----G--DNYPVPDRMLKHTEKIVKDYLRQ 150 (527)
T ss_pred HHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCCCCCCHHHHH-HHHHHh-----c--CCCCCCCCCHHHHHHHHHHHHHh
Confidence 44455554444433 257999999999999888888 445443 1 159999999999999999664 3
Q ss_pred h--CCC-C--CCcEEEcCCcHHHHHH-HHH-----hcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEee
Q 013521 130 D--MGI-E--GDEIFISDGAQSDISR-LQM-----LLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMN 198 (441)
Q Consensus 130 ~--~~~-~--~~~I~~t~G~~~al~~-l~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~ 198 (441)
. ... . +++|++|+|+++++.. +.. +++|||+|++++|+|+.|...+...|.. .+++.++
T Consensus 151 ~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~----------~~~v~v~ 220 (527)
T PRK09275 151 EMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYD----------LEVVHIN 220 (527)
T ss_pred hccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCC----------eEEEEee
Confidence 2 222 2 3499999999999987 443 6899999999999999999998887621 3566666
Q ss_pred cCCCCCccCCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHH--cCcEEEEcccccccccCCCCCccccc
Q 013521 199 CRPENNFFPDLST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKA--NGSIIVYDSAYAAYITDPSPRSIYEI 271 (441)
Q Consensus 199 ~~~~~~~~~~~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~--~~~~ii~De~~~~~~~~~~~~~~~~~ 271 (441)
.+++++|.++.+. .+++|+|+++|||||||.++|.+++++|+++|++ ++++||+||+|.+|.+. +.++...
T Consensus 221 ~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~--~~s~~~~ 298 (527)
T PRK09275 221 ADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD--FRSLFAV 298 (527)
T ss_pred cCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc--ccCHHHh
Confidence 6666667765432 4789999999999999999999999999999965 59999999999998752 4455444
Q ss_pred CCCcceeEEEecCCcccCCccceeEEEEeecc-----ccc--------------------cCCchhHHHH----HHHHhh
Q 013521 272 PGAREVAIEISSFSKFAGFTGVRLGWTVVPEE-----LRY--------------------SNGYPVIKDF----NRIVCT 322 (441)
Q Consensus 272 ~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~-----~~~--------------------~~~~~~~~~~----~~~~~~ 322 (441)
.++++|+++||||.||++|||+||++++++ ++. ....++++++ ..+...
T Consensus 299 --~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~ 376 (527)
T PRK09275 299 --LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALN 376 (527)
T ss_pred --CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHh
Confidence 357899999999999999999999999987 210 0111122222 455556
Q ss_pred hcCCCcHHHHHH-----HHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCC----------
Q 013521 323 CFNGASNIVQAG-----GLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG---------- 387 (441)
Q Consensus 323 ~~~~~~~~~~~a-----~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------- 387 (441)
...+++.+.|.+ +.+++. ....+.+.+++.+++|++.+.+.|.. ++...++.+++|+|++++.
T Consensus 377 ~t~~~s~p~Q~a~al~~~~all~-~~~~~~~~~~~~~~~Rr~~l~~~Lg~-~~~~~~p~g~fY~~~di~~~~~~~~g~~f 454 (527)
T PRK09275 377 HTAGLSTPQQVQMALFSLFALLD-EEDAYKKAMKDIIRRRYKALYEGLGL-PEPEDPNNAAYYTLIDLEEWAEKNYGKEF 454 (527)
T ss_pred hccCCCCHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHcCC-CCcCCCCCeeEEEEEEhHHhhhhccCchh
Confidence 667788888986 234454 34467899999999999999988832 3443567889999999852
Q ss_pred -------CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-CHHHHHHHHHHHHhhC
Q 013521 388 -------SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG-HREYISEACRRLKNFL 441 (441)
Q Consensus 388 -------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~~~~~~l~~l~~~l 441 (441)
.++.+++.+|++++||.+.||+.|+. +++++|+|+++ +++++.++.++|++++
T Consensus 455 ~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~~~~~~~rl~~~l 515 (527)
T PRK09275 455 ADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEEDYAKIGKAIRKLL 515 (527)
T ss_pred hhhhhccCCHHHHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence 24678899999999999999999976 46889999985 7899999999998763
No 55
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.6e-48 Score=378.76 Aligned_cols=329 Identities=25% Similarity=0.443 Sum_probs=269.9
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCC-CCCCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMG-IEGDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~-~~~~~I~~t~G~~~al 148 (441)
.++++|+.|.|..+.++.+.+++.+... ..+|++..|.+++|+++|+|+.+ ++. +++++|++|+|+++++
T Consensus 27 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i 99 (364)
T PRK07865 27 DGIVDLSVGTPVDPVPPVIQEALAAAAD-------APGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELV 99 (364)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHh-------hCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHH
Confidence 4689999999887777888888876542 13798889999999999999976 453 7899999999999999
Q ss_pred HHH-HHh-cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCc
Q 013521 149 SRL-QML-LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNP 226 (441)
Q Consensus 149 ~~l-~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NP 226 (441)
.++ ..+ +++||.|++++|+|+.+...+...| .+++.++.. .+++. .++++++++|||||
T Consensus 100 ~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~------~~l~~-~~~~~v~~~~p~NP 160 (364)
T PRK07865 100 AWLPTLLGLGPGDVVVIPELAYPTYEVGARLAG------------ATVVRADSL------TELGP-QRPALIWLNSPSNP 160 (364)
T ss_pred HHHHHHHcCCCCCEEEECCCCcccHHHHHHhcC------------CEEEecCCh------hhCCc-ccceEEEEcCCCCC
Confidence 985 555 6899999999999999999998888 466666421 12222 57899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc---CCCcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 227 TGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI---PGAREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 227 tG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~---~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
||.++|.+++++|+++|++||++||+||+|.++.+++.+.+.... ....+++|+++||||.+|+||+|+||+++|++
T Consensus 161 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~ 240 (364)
T PRK07865 161 TGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPA 240 (364)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHH
Confidence 999999999999999999999999999999998876533332221 11246899999999999999999999999988
Q ss_pred ccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEE
Q 013521 304 LRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWV 383 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 383 (441)
+ ++.+...+.....+++.+.|.++.+++.+ .+++++.++.++++++.+.+.|+++|+.+..+++|+|+|+
T Consensus 241 ~--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 310 (364)
T PRK07865 241 L--------VAELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLWA 310 (364)
T ss_pred H--------HHHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEEE
Confidence 7 45666555555556889999999998875 4567888999999999999999998988877788999999
Q ss_pred EcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 013521 384 QFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLK 438 (441)
Q Consensus 384 ~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~ 438 (441)
+++. +..++.+.+ +++||.+.||..|+...++++||+++.+++++++++++|+
T Consensus 311 ~~~~-~~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 311 TRGE-DCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred eCCC-CHHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 9852 345565554 5669999999998766678999999778999999999986
No 56
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.6e-48 Score=383.49 Aligned_cols=349 Identities=22% Similarity=0.381 Sum_probs=283.5
Q ss_pred CCCCeEEeCCCCCC----CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCC
Q 013521 70 PDARLIRLGIGDTT----QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDG 143 (441)
Q Consensus 70 ~~~~~i~l~~g~~~----~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G 143 (441)
++.++++|+.|+|+ +++++.+.+++.+.+.. ....+|++..|..++|+++|+++.+ +..+++++|++|+|
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G 104 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRS----GKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSG 104 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhc----CCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecC
Confidence 35689999999974 67888999999988754 3345798889999999999999975 55568899999999
Q ss_pred cHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccE
Q 013521 144 AQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDI 217 (441)
Q Consensus 144 ~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~ 217 (441)
+++++.+ +..++++||+|+++.|+|+.+...+...| .+++.++++.++++..+++. .+++++
T Consensus 105 ~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (403)
T TIGR01265 105 CSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSG------------LEVRLYDLLPEKDWEIDLDGLEALADEKTVA 172 (403)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcC------------CEEEEecCCcccCCccCHHHHHHHhCcCccE
Confidence 9999998 56677999999999999999988888888 58888887654444444332 357899
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
+++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++. ..++..++. ..++|+++||||.|++||+|+|
T Consensus 173 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG 251 (403)
T TIGR01265 173 IVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFAS-IVPVLSLGGISKRWVVPGWRLG 251 (403)
T ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhcc-CCcEEEEeecccccCCCcceEE
Confidence 99999999999999999999999999999999999999999987653 345666643 3469999999999989999999
Q ss_pred EEEeec--cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee
Q 013521 297 WTVVPE--ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVN 373 (441)
Q Consensus 297 ~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 373 (441)
|+++++ .++.. .+.+.+..... ...+++.++|.++.+++.+....++++.++.++++++.+.+.|+.+ |+.+.
T Consensus 252 ~~v~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 327 (403)
T TIGR01265 252 WIIIHDPHGIFRD---TVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCP 327 (403)
T ss_pred EEEEeCchhhhHH---HHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 999853 33200 01222332222 2345788999999999975445788999999999999999999987 78776
Q ss_pred CCCCceEEEEEcCCC------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 374 GGKNAPYVWVQFPGS------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 374 ~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
.|.+|+|+|++++.. ++.+++..+++++||.+.||+.|+ .+++|||+++.+++.+++++++|++++
T Consensus 328 ~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~--~~~~iRis~~~~~~~l~~~l~~l~~~~ 399 (403)
T TIGR01265 328 KPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG--LPNWVRITITVPESMLEEACSRIKEFC 399 (403)
T ss_pred CCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 778999999999732 567888888888899999999996 368999999888889999999998763
No 57
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-48 Score=382.92 Aligned_cols=342 Identities=25% Similarity=0.364 Sum_probs=282.3
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh-hCCCCCCcEEEcCCcHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK-DMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~-~~~~~~~~I~~t~G~~~al~~ 150 (441)
.++++|+.|.|+.++|+.+.+++.+.. ....+|++..|..++|+++++++.+ +.++++++|++|+|+++++.+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~ 103 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYD------EEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILF 103 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHh------cCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHH
Confidence 468999999999888888888887754 2345798889999999999999975 667889999999999999998
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccC-CCC---C--CCCccEEEEcCC
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFP-DLS---T--TSRTDIIFFCSP 223 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~-~~~---~--~~~~~~v~i~~p 223 (441)
+..++++||+|++++|+|+.+...++..| .+++.++.+.++++.. +++ . .+++++|++++|
T Consensus 104 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p 171 (397)
T PRK07568 104 AMMAICDPGDEILVPEPFYANYNGFATSAG------------VKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNP 171 (397)
T ss_pred HHHHhcCCCCEEEEecCCCccHHHHHHHcC------------CEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECC
Confidence 56678999999999999999988888888 5888998865445432 222 1 367899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
|||||.++|.+++++|+++|+++|++||+||+|.+|.+++. +.++..+++..+++++++||||.+|+||+|+||+++++
T Consensus 172 ~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~ 251 (397)
T PRK07568 172 GNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKN 251 (397)
T ss_pred CCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCC
Confidence 99999999999999999999999999999999999887653 44666665446789999999999999999999999864
Q ss_pred -cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceE
Q 013521 303 -ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPY 380 (441)
Q Consensus 303 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 380 (441)
++ ++.+...... ..+++.+.|.++.+++++ ...+++++++.++++++.+.+.|+++ ++.+..+.+|+|
T Consensus 252 ~~~--------~~~~~~~~~~-~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~ 321 (397)
T PRK07568 252 KEL--------IAAAMKLCQA-RLSPPTLEQIGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFY 321 (397)
T ss_pred HHH--------HHHHHHHhhc-cCCCCcHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceE
Confidence 44 3444433332 345788999999988874 35788999999999999999999987 777777788899
Q ss_pred EEEEcCCCChHHHHHHHHHh-----cCeEEeCCCCcCC---CCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 381 VWVQFPGSSSWDVFAEILEK-----THILTIPGSGFGP---GGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 381 ~~~~~~~~~~~~~~~~ll~~-----~gi~v~pg~~f~~---~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+|++++..++.++...++++ +||.+.||+.|+. .+++++||+++.+++++++++++|++++
T Consensus 322 ~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l 390 (397)
T PRK07568 322 IIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEAL 390 (397)
T ss_pred EEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 99999855667888888764 6999999999852 2357999999878899999999998763
No 58
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=4.6e-48 Score=374.30 Aligned_cols=345 Identities=23% Similarity=0.404 Sum_probs=275.8
Q ss_pred chHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hC
Q 013521 54 LFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DM 131 (441)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~ 131 (441)
++.++.+.......+ +.++++|+.|+|+.++++.+.+++.+... ...|++..|..+||+++++|+.+ ++
T Consensus 5 ~~~~~~~~~~~~~~~--~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~~~~~~~~ 75 (357)
T TIGR03539 5 PWDSLAPYKAKAASH--PDGIVDLSVGTPVDPVPPLIRAALAAAAD-------APGYPQTWGTPELREAIVDWLERRRGV 75 (357)
T ss_pred hHHHHHHHHHHhhhC--CCCeEEccCCCCCCCCCHHHHHHHHHHHh-------hCCCCcccCCHHHHHHHHHHHHHhcCC
Confidence 344454444443322 35689999999888888888888876542 24698889999999999999975 55
Q ss_pred C-CCCCcEEEcCCcHHHHHHH-HHh-cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC
Q 013521 132 G-IEGDEIFISDGAQSDISRL-QML-LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD 208 (441)
Q Consensus 132 ~-~~~~~I~~t~G~~~al~~l-~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~ 208 (441)
. +++++|++|+|+++++..+ ..+ +++||.|++++|+|+++...+...| .+++.++. . ..
T Consensus 76 ~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~~~v~~--~----~~ 137 (357)
T TIGR03539 76 PGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAG------------ATPVAADD--P----TE 137 (357)
T ss_pred CCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcC------------CEEeccCC--h----hh
Confidence 4 8899999999999999985 455 6999999999999999998888888 46666531 1 11
Q ss_pred CCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc---CCCcceeEEEecCC
Q 013521 209 LSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI---PGAREVAIEISSFS 285 (441)
Q Consensus 209 ~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~---~~~~~~~i~i~S~S 285 (441)
+. ..++++|++++||||||.++|.+++++|+++|++||++||+||+|.++.+++.+.+.... +...+++|+++|||
T Consensus 138 l~-~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 216 (357)
T TIGR03539 138 LD-PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLS 216 (357)
T ss_pred cC-ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccc
Confidence 22 257899999999999999999999999999999999999999999988876533232221 12246799999999
Q ss_pred cccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 013521 286 KFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAF 365 (441)
Q Consensus 286 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 365 (441)
|.++++|+|+||+++|+++ ++.+.+.......+++.+.|.++.+++.+ ..++++.++.++++++.+.+.|
T Consensus 217 K~~~~~G~R~G~~i~~~~~--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L 286 (357)
T TIGR03539 217 KRSNLAGYRAGFVAGDPAL--------VAELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPAL 286 (357)
T ss_pred cccCCCceeEEEEecCHHH--------HHHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877 45566555555556889999999999874 3567888999999999999999
Q ss_pred HhCCCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 013521 366 QSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLK 438 (441)
Q Consensus 366 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~ 438 (441)
++.|+.+.++.+|+|+|++++. +..++...+ +++||.+.||..|+..++++|||+++.+.+++++++++|+
T Consensus 287 ~~~g~~~~~p~~~~~~~~~~~~-~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l~ 357 (357)
T TIGR03539 287 EKAGFRIDHSEAGLYLWATRGE-DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARLT 357 (357)
T ss_pred HHcCCCCcCCCccEEEEEECCC-CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhhC
Confidence 9888888878889999999863 445566555 5669999999988766678999999888899999999874
No 59
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.1e-48 Score=392.00 Aligned_cols=345 Identities=21% Similarity=0.321 Sum_probs=271.4
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al~ 149 (441)
+++|+|+.+.+.+| ..++++..+.+.... .....+|++..|..+||++||+|+.+ ++.+++++|++|+|+++++.
T Consensus 129 p~~i~~~~~~~~fp--~~~i~~a~~~l~~~~-~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~ 205 (534)
T PLN02231 129 PSLLDKSETHGLFS--ADAIERAWQILDQIP-GRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVH 205 (534)
T ss_pred CccCCCCCccccCC--HHHHHHHHHHHHhcC-CccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHH
Confidence 46888887666554 355555555555321 13467899999999999999999975 66789999999999999999
Q ss_pred HH-HHhc-CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCC-----------CCcc
Q 013521 150 RL-QMLL-GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTT-----------SRTD 216 (441)
Q Consensus 150 ~l-~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~-----------~~~~ 216 (441)
++ ..++ .+||.|+++.|+|+.|...+...| .+++.++++++++|.++++.. .++|
T Consensus 206 ~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g------------~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k 273 (534)
T PLN02231 206 MMMQLLIRSEKDGILCPIPQYPLYSASIALHG------------GTLVPYYLDEATGWGLEISELKKQLEDARSKGITVR 273 (534)
T ss_pred HHHHHhccCCCCEEEEeCCCChhHHHHHHHcC------------CEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeE
Confidence 85 5566 479999999999999999999999 589999998766676664321 1689
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC--CCCcccccCC------CcceeEEEecCCccc
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP--SPRSIYEIPG------AREVAIEISSFSKFA 288 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~--~~~~~~~~~~------~~~~~i~i~S~SK~~ 288 (441)
+++++|||||||.++|.+++++|+++|++||++||+||+|.++.+++ .+.++..+.. ...++++++||||.+
T Consensus 274 ~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~ 353 (534)
T PLN02231 274 ALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGY 353 (534)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCccc
Confidence 99999999999999999999999999999999999999999998853 2445554421 123689999999975
Q ss_pred -CCccceeEEEEee---ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCC-----cH----HHHHHHHHHHH
Q 013521 289 -GFTGVRLGWTVVP---EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPD-----GF----QALRTVIDYYK 355 (441)
Q Consensus 289 -~~~G~r~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~----~~~~~~~~~~~ 355 (441)
|+||+|+||++++ +++ ++.+...... ..+++.+.|.++..+++.. .+ ++.+.+++.|+
T Consensus 354 ~g~pGlRiGy~~~~~~~~~l--------~~~l~k~~~~-~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~ 424 (534)
T PLN02231 354 YGECGKRGGYMEVTGFTSDV--------REQIYKVASV-NLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLA 424 (534)
T ss_pred ccCCccceEEEEEecCCHHH--------HHHHHHHHhh-hcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 7899999999874 444 4555554442 3456778898888888632 23 23456689999
Q ss_pred HHHHHHHHHHHhC-CCeeeCCCCceEEEEEc--CCC-----------ChHHHHHHHHHhcCeEEeCCCCcCC-CCCCeEE
Q 013521 356 ENAKIIVDAFQSL-GLKVNGGKNAPYVWVQF--PGS-----------SSWDVFAEILEKTHILTIPGSGFGP-GGNEHIR 420 (441)
Q Consensus 356 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~--~~~-----------~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~~iR 420 (441)
++++.+.+.|+++ |+.+.++++|+|+|+++ +.. .+..++.++++++||.+.||+.|+. .+..++|
T Consensus 425 ~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~R 504 (534)
T PLN02231 425 RRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFR 504 (534)
T ss_pred HHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEE
Confidence 9999999999988 89999889999999655 321 1333567788888999999999985 3456899
Q ss_pred EEeecCHHHHHHHHHHHHhh
Q 013521 421 VSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 421 ls~~~~~~~~~~~l~~l~~~ 440 (441)
+++..+++++++++++|+++
T Consensus 505 it~~~~~e~l~eal~RL~~~ 524 (534)
T PLN02231 505 CTILPQEDKIPAIVSRLTEF 524 (534)
T ss_pred EEeCCCHHHHHHHHHHHHHH
Confidence 99988899999999999875
No 60
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-48 Score=348.19 Aligned_cols=349 Identities=21% Similarity=0.345 Sum_probs=299.1
Q ss_pred CCeEEeCCCCCC----CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcH
Q 013521 72 ARLIRLGIGDTT----QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQ 145 (441)
Q Consensus 72 ~~~i~l~~g~~~----~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~ 145 (441)
+.+|.|+.|+|. +++.+...+|+.++++. ....+|+|..|....|+++|+|+++ ...+++++|++|+|++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~S----gk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~ 136 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRS----GKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCS 136 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhc----CCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccch
Confidence 479999999985 46778889999999975 6678999999999999999999876 4457899999999999
Q ss_pred HHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEE
Q 013521 146 SDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIF 219 (441)
Q Consensus 146 ~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~ 219 (441)
+||.+ +..+.+||..|+++.|+|+-|...+...| +++..+++-++.+|..|+.. .++|.+++
T Consensus 137 qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~------------lEVR~ydlLPe~~weIDL~~veal~DENT~Aiv 204 (447)
T KOG0259|consen 137 QAIELAISSLANPGANILLPRPGFPLYDTRAIYSG------------LEVRYYDLLPEKDWEIDLDGVEALADENTVAIV 204 (447)
T ss_pred HHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcC------------ceeEeecccCcccceechHHHHHhhccCeeEEE
Confidence 99998 78888999999999999999998888888 79999999999999888653 47999999
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEE
Q 013521 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298 (441)
Q Consensus 220 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l 298 (441)
++||+||+|.++|.+.+++|+++|++++++||.||+|.++.|++. ..++..+... --+|.++|.||.|=+||||+||+
T Consensus 205 viNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssi-VPVitlggisKrW~VPGWRlGWi 283 (447)
T KOG0259|consen 205 VINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSI-VPVITLGGISKRWIVPGWRLGWI 283 (447)
T ss_pred EeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhcccc-CceEeecccccccccCCceeeeE
Confidence 999999999999999999999999999999999999999999875 4566666432 23799999999998999999999
Q ss_pred EeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eeCCC
Q 013521 299 VVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLK-VNGGK 376 (441)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~ 376 (441)
+..+..-.....+..+.+..+.. ...+++.+.|.|.-.+|+.-..+...+..+.++.+.++.++.|++. ++. ...|+
T Consensus 284 ~~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPe 362 (447)
T KOG0259|consen 284 ALHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPE 362 (447)
T ss_pred EEecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCC
Confidence 98765522233333334443333 3445889999999999986666788999999999999999999998 777 56778
Q ss_pred CceEEEEEcC------CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 377 NAPYVWVQFP------GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 377 ~~~~~~~~~~------~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+++|+|+++. -.++.+|+.+|.+|+.+.+.||..|+. ++|+|+++....+.++++++||+++
T Consensus 363 g~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~--~nw~Ri~i~~~~~~leea~~Rik~F 430 (447)
T KOG0259|consen 363 GCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGL--KNWLRIVITVEEEMLEEAFSRIKEF 430 (447)
T ss_pred cceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccC--CCeEEEEEccChHHHHHHHHHHHHH
Confidence 9999999986 146789999999999999999999985 7899999998999999999999975
No 61
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-48 Score=380.85 Aligned_cols=343 Identities=25% Similarity=0.414 Sum_probs=289.8
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al 148 (441)
+.++++|+.|+|+.++++.+.+++.+.+.. ...+|++..|..+||+++|+++.+ +.++++++|++|+|+++++
T Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 104 (393)
T PRK05764 30 GRDVISLGAGEPDFDTPEHIKEAAIEALDD-----GKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQAL 104 (393)
T ss_pred cCCEEEeCCCCCCCCCCHHHHHHHHHHHhc-----CCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHH
Confidence 357999999999988889999999888763 334698889999999999999965 4567899999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
.+ +..++++||.|++++|+|+.+..+++..| .+++.++.++++++.++++. .++++++++++
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 172 (393)
T PRK05764 105 YNAFMALLDPGDEVIIPAPYWVSYPEMVKLAG------------GVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNS 172 (393)
T ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcC------------CEEEEEecCcccCCcCCHHHHHHhhCccceEEEEEC
Confidence 87 56778999999999999999999999888 58889998765566554332 35789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCccccc-CCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEI-PGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~-~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
||||||.++|.+++++|+++|++||+++|+||+|.++.+++. +.++.++ .+..+++++++||||.+|++|+|+||+++
T Consensus 173 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~ 252 (393)
T PRK05764 173 PSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG 252 (393)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec
Confidence 999999999999999999999999999999999999887542 3455554 23456899999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCce
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAP 379 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 379 (441)
++++ .+.+.........+++.+.|.++.+++.. ...+++++++.++++++.+.+.|+++ |+.+.++.+++
T Consensus 253 ~~~~--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~ 323 (393)
T PRK05764 253 PKEL--------IKAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAF 323 (393)
T ss_pred CHHH--------HHHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcce
Confidence 8877 45666666555666889999999999873 34778899999999999999999998 88888878889
Q ss_pred EEEEEcCCC------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 380 YVWVQFPGS------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 380 ~~~~~~~~~------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
|+|++++.. ++.++...+++++||.+.||..|+. +++|||+++.+++++++++++|.+++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~vRis~~~~~~~~~~~i~~l~~~~ 389 (393)
T PRK05764 324 YVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGA--PGYVRLSYATSLEDLEEGLERIERFL 389 (393)
T ss_pred EEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCC--CCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999742 1367888888888999999998864 78999999889999999999998763
No 62
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.8e-47 Score=369.22 Aligned_cols=329 Identities=19% Similarity=0.340 Sum_probs=265.9
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQ 152 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~ 152 (441)
++++|+.|.++.++|+.+.+++.+.+.. ..+|+ +.+..+||+++|+|+ ++++++|++|+|+++++.++.
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~------~~~Y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~ 88 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENLDK------LVEYP-DPDYLELRKRIASFE----QLDLENVILGNGATELIFNIV 88 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHh------hhcCC-CccHHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHH
Confidence 4799999998888889999999987642 34685 457899999999997 789999999999999999854
Q ss_pred HhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC--C-CC-CCCccEEEEcCCCCccc
Q 013521 153 MLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD--L-ST-TSRTDIIFFCSPNNPTG 228 (441)
Q Consensus 153 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~--~-~~-~~~~~~v~i~~p~NPtG 228 (441)
..+.+ +.|++++|+|+.+...++..| .+++.++.+.++++..| + +. ..++++++++|||||||
T Consensus 89 ~~~~~-~~v~i~~P~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG 155 (354)
T PRK06358 89 KVTKP-KKVLILAPTFAEYERALKAFD------------AEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTG 155 (354)
T ss_pred HHhCC-CcEEEecCChHHHHHHHHHcC------------CeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCC
Confidence 44555 689999999999999998888 58889988765555554 1 11 35689999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccC
Q 013521 229 HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN 308 (441)
Q Consensus 229 ~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~ 308 (441)
.++|.+++++|+++|++|+++||+||+|.+|.+++.+.+.....+..+++|+++||||.+|+||+|+||++++++.+
T Consensus 156 ~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~--- 232 (354)
T PRK06358 156 QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNL--- 232 (354)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHH---
Confidence 99999999999999999999999999999998875444433322235789999999999999999999999865432
Q ss_pred CchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEEEcCC
Q 013521 309 GYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQFPG 387 (441)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 387 (441)
++.+..... ..+++.+.|.++.+++.+ ..++++.++.++++++.+.+.|+++ ++.+.++ +|+|+|++++.
T Consensus 233 ----~~~~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~~ 303 (354)
T PRK06358 233 ----AEKLLQMRE--PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP-SVNFIFFKLEK 303 (354)
T ss_pred ----HHHHHHhCC--CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-cceEEEEEcCc
Confidence 345555433 345788999999999863 3567888999999999999999987 7777765 67799999973
Q ss_pred CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 388 SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 388 ~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
..++.+.+++ +||.+.||+.|+..++++|||++ .++++.+++++.|++++
T Consensus 304 --~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls~-~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 --PIDLRKELLK-KGILIRSCSNYRGLDENYYRVAV-KSREDNKKLLKALEVIL 353 (354)
T ss_pred --hHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHHh
Confidence 4678887776 59999999999655678999997 45677788888887653
No 63
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=3.1e-47 Score=376.41 Aligned_cols=350 Identities=20% Similarity=0.291 Sum_probs=260.2
Q ss_pred CCeEEeCCCCCCC-CCc-HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHH
Q 013521 72 ARLIRLGIGDTTQ-PIP-DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 72 ~~~i~l~~g~~~~-~~~-~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~a 147 (441)
.++|+|+.|.|+. +++ +.+.+++.+.+..........+|++..|..+||++||+|+.+ ++++++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 4689999999874 333 345566666554311113446799999999999999999975 667899999999999999
Q ss_pred HHHH-HHhcC-----CCCEEEE-eCCCchhhHhHHHHhccccccccccCccceeEEeecCCCC-CccCCCC---CCCCcc
Q 013521 148 ISRL-QMLLG-----SNVTVAV-QDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN-NFFPDLS---TTSRTD 216 (441)
Q Consensus 148 l~~l-~~l~~-----~gd~Vlv-~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~---~~~~~~ 216 (441)
+.++ ..+++ +||.|++ ++|+|++|...+...+.... .....++++.++ ++..+++ ...+++
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 181 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVS--------YRPNIELLPEGQFKYHVDFEHLHIDEDTG 181 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceee--------cccccccccccccccCCCHHHcccCCCce
Confidence 9985 55664 6899999 79999999876554442100 112222332211 2233322 235789
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
++++||||||||.++|.+++++|+++|++||++||+||+|.++.......+.. +...+++|+++||||. ++||+|+|
T Consensus 182 ~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~--~~~~~~vI~~~SfSK~-~~pGlRiG 258 (416)
T PRK09440 182 AICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEAT--PLWNPNIILCMSLSKL-GLPGVRCG 258 (416)
T ss_pred EEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcC--ccccCCeEEEeccccc-CCCcceEE
Confidence 99999999999999999999999999999999999999998643211001111 1124689999999996 78999999
Q ss_pred EEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHH-HHHHHHHHHHHHHHHHHhC----CC
Q 013521 297 WTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRT-VIDYYKENAKIIVDAFQSL----GL 370 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~-~~~~~~~~~~~l~~~L~~~----g~ 370 (441)
|+++++++ ++.+.........+++.+.|.++.+++.+..+ .+..+ +++.|+++++.+.+.|.+. ++
T Consensus 259 ~~i~~~~l--------~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~ 330 (416)
T PRK09440 259 IVIADEEI--------IEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPC 330 (416)
T ss_pred EEeCCHHH--------HHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCe
Confidence 99999887 46666666655566899999999999987655 45544 6888999999999988764 45
Q ss_pred eeeCCCCceEEEEEcCC--CChHHHHHHHHHhcCeEEeCCCCcCCC-------CCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 371 KVNGGKNAPYVWVQFPG--SSSWDVFAEILEKTHILTIPGSGFGPG-------GNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 371 ~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~pg~~f~~~-------~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
.+..+++|+|+|++++. .++.++...+ +++||.+.||+.|+.. +.+++||+++.+++++++++++|++++
T Consensus 331 ~~~~p~gg~fiw~~~~~~~~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~ 409 (416)
T PRK09440 331 LIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEV 409 (416)
T ss_pred EEecCCCceEEEEECCCCCCCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHH
Confidence 66677789999999974 3566677665 5669999999998642 136999999778999999999998763
No 64
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.8e-47 Score=370.72 Aligned_cols=326 Identities=18% Similarity=0.241 Sum_probs=260.1
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL 151 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l 151 (441)
.++++|+.|++++++|+.+.+++.+.+.. ..+|++. +..+||++||+|+ ++++++|++|+|+++++.++
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~------~~~Y~~~-~~~~Lr~aia~~~----~v~~~~I~it~G~~~~i~~~ 90 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSA------LRHYPDP-DYRELRLALAQHH----QLPPEWILPGNGAAELLTWA 90 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHH------hhcCCCc-CHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHH
Confidence 36899999999999999999999887652 4568654 5689999999997 78999999999999999986
Q ss_pred HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCc---cCCCCC----CCCccEEEEcCCC
Q 013521 152 QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF---FPDLST----TSRTDIIFFCSPN 224 (441)
Q Consensus 152 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~---~~~~~~----~~~~~~v~i~~p~ 224 (441)
...+.+||.|++++|+|+.+...++..| .+++.++++.++++ ..+++. ..+++++++||||
T Consensus 91 ~~~l~~g~~vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~ 158 (360)
T PRK07392 91 GRELAQLRAVYLITPAFGDYRRALRAFG------------ATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPH 158 (360)
T ss_pred HHHhCCCCeEEEECCCcHHHHHHHHHcC------------CeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCC
Confidence 5445678999999999999999999999 58999999766554 123222 3578899999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
||||.+++.+ +|.++++++++ +|+||+|.+|.+++.+.++....+..+++|+++||||.||+||+|+||+++++++
T Consensus 159 NPTG~~~~~~---~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~ 234 (360)
T PRK07392 159 NPTGKLWSRE---AILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDR 234 (360)
T ss_pred CCCCCCcCHH---HHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHH
Confidence 9999999955 55666678885 5669999999876543343332223468999999999999999999999999877
Q ss_pred cccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEE
Q 013521 305 RYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWV 383 (441)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 383 (441)
+ +.+.... ...+++.++|.++.+++++. .+.+..++.++++++.+.+.|+++ |+.+.+ .+++|+|+
T Consensus 235 ~--------~~~~~~~--~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~ 301 (360)
T PRK07392 235 L--------QRWQQWR--DPWPVNGLAAAAAIAALADR--DFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLV 301 (360)
T ss_pred H--------HHHHhhC--CCCCCCHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEE
Confidence 3 4454333 23458999999999999753 455677788999999999999887 777765 68999999
Q ss_pred EcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecC--HHHHHHHHHHHH
Q 013521 384 QFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGH--REYISEACRRLK 438 (441)
Q Consensus 384 ~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~--~~~~~~~l~~l~ 438 (441)
+++. ++.++...+++++||.+.||..|+..++++|||+++.. .+.+.++++++.
T Consensus 302 ~~~~-~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 302 QSQG-SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAIL 357 (360)
T ss_pred EcCC-CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 9874 56778888888789999999999766678999999764 356777777664
No 65
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-47 Score=369.99 Aligned_cols=322 Identities=22% Similarity=0.356 Sum_probs=262.2
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
+.++++|+.|++++++|+.+.+++.+.+.. ..+|+ +.|..+||+++|+|+ ++++++|++|+|+++++.+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~-~~~~~~lr~~ia~~~----~~~~~~I~it~G~~~al~~ 97 (357)
T PRK14809 29 PDDLVKLSSNENPHGPSPAAVEAIREAAER------VHSYP-KASHADLTAALADRW----DVSPEQVWLANGGDGALDY 97 (357)
T ss_pred ccceeEecCCCCCCCCCHHHHHHHHHHHhh------hhcCC-CCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHH
Confidence 357999999999998888889999887642 34685 578999999999997 7899999999999999998
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC----CCCccEEEEcCCCC
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST----TSRTDIIFFCSPNN 225 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~----~~~~~~v~i~~p~N 225 (441)
+..++++||.|++++|+|+.+...+...| .+++.++++.++++..+.+. ..+++++++|||||
T Consensus 98 ~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~i~l~~p~N 165 (357)
T PRK14809 98 LARAMLDPGDTVLVPDPGFAYYGMSARYHH------------GEVREYPVSKADDFEQTADTVLDAYDGERIVYLTSPHN 165 (357)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHHHcC------------CeEEEEecccCcCCCcCHHHHHHhhcCCcEEEEeCCCC
Confidence 56678999999999999998887777777 57888888655566554332 24689999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccc
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELR 305 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~ 305 (441)
|||.++|.+++++|+++|++ +++||+||+|.+|.++.. .+..++ ..+++++++||||.+|+||+|+||+++|+++
T Consensus 166 PTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~--~~~~~~-~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~- 240 (357)
T PRK14809 166 PTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERPS--AVALVE-ERDDVAVLRTFSKAYGLAGLRLGYAVVPEEW- 240 (357)
T ss_pred CCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCch--hHHHHh-hCCCEEEEecchhHhcCcchhheeeecCHHH-
Confidence 99999999999999999875 789999999999876432 122222 3468999999999999999999999999887
Q ss_pred ccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEc
Q 013521 306 YSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQF 385 (441)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 385 (441)
++.+.+... ..+++.++|.++.+++.+ ..++++.++.++++++.+.+.|+... . +++|+|+|+++
T Consensus 241 -------~~~~~~~~~--~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~---~-~~~g~f~~~~~ 305 (357)
T PRK14809 241 -------ADAYARVNT--PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAPT---W-ESAGNFVLAEV 305 (357)
T ss_pred -------HHHHHHhCC--CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCcc---C-CCCCCEEEEEC
Confidence 455554432 345788999999998874 46788899999999999999997542 2 46899999998
Q ss_pred CCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 386 PGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 386 ~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+ ++.++.+.+ +++||.|.||+.|+. +++|||+++ +++++++++++|++++
T Consensus 306 ~--~~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRls~~-~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 306 G--DASAVAEAA-QERGVIVRDCTSFGL--PECIRITCG-TREETERAVEVLNEVL 355 (357)
T ss_pred C--CHHHHHHHH-HHCCEEEEECccCCC--CCeEEEecC-CHHHHHHHHHHHHHHh
Confidence 6 456777665 566999999999963 579999975 5789999999998864
No 66
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.5e-47 Score=376.32 Aligned_cols=344 Identities=20% Similarity=0.300 Sum_probs=260.4
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHH-HHhhhC--C-CCCC--cEEEcCCcHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIAD-KFYKDM--G-IEGD--EIFISDGAQS 146 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~-~l~~~~--~-~~~~--~I~~t~G~~~ 146 (441)
++|+|+.|+|++++++. +.++.+.+.. . +|+++.|..++++++++ |+.+.. . .+++ +|++|+|+++
T Consensus 95 ~~i~l~~g~p~~~~~~~-~~~~~~~~~~----~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAF-LYEMCDGIIG----D---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHhhcCCCCCCCCCHH-HHHHHHHhhc----C---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 57999999999986554 4566665531 1 58777888888888885 544422 2 2344 8999999999
Q ss_pred HHHH-HHH-----hcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCC-----ccCCCCC----
Q 013521 147 DISR-LQM-----LLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENN-----FFPDLST---- 211 (441)
Q Consensus 147 al~~-l~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~-----~~~~~~~---- 211 (441)
++.. +.. +++|||+|++++|+|+.|...+...+.. .+++.++.+.+++ |..+.+.
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g----------~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYD----------FEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCC----------cEEEEeecccccccccccCCCCHHHHHHh
Confidence 9987 444 6899999999999999999988876421 4677777764333 6555332
Q ss_pred -CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHc--CcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCccc
Q 013521 212 -TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKAN--GSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFA 288 (441)
Q Consensus 212 -~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~--~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (441)
.+++|+++++|||||||.++|.+++++|+++|++| +++||+||+|.+|.++ +.++.+. .++++|+++||||.|
T Consensus 237 ~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~--~~sl~~~--~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 237 RDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD--FRSLFAE--LPYNTIGVYSFSKYF 312 (521)
T ss_pred cCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc--ccchhhh--CCCCEEEEEcchhhc
Confidence 36899999999999999999999999999999987 9999999999988753 4455544 457899999999999
Q ss_pred CCccceeEEEEeeccccc-----c--------------------CCchhH----HHHHHHHhhhcCCCcHHHHH-----H
Q 013521 289 GFTGVRLGWTVVPEELRY-----S--------------------NGYPVI----KDFNRIVCTCFNGASNIVQA-----G 334 (441)
Q Consensus 289 ~~~G~r~G~l~~~~~~~~-----~--------------------~~~~~~----~~~~~~~~~~~~~~~~~~~~-----a 334 (441)
|++|||+||++++++.+. . +..+.+ ...+.+......+++.+.|. +
T Consensus 313 g~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a 392 (521)
T TIGR03801 313 GATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFS 392 (521)
T ss_pred cCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHH
Confidence 999999999999876220 0 001111 12233444455567788776 3
Q ss_pred HHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCC-----------------CChHHHHHHH
Q 013521 335 GLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG-----------------SSSWDVFAEI 397 (441)
Q Consensus 335 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l 397 (441)
+.+++. ....+.+.+++.+++|++.+.+.|. ..+...++.+++|+|++++. .++.+++.+|
T Consensus 393 ~~all~-~~~~y~~~~~~~~~~R~~~l~~~Lg-~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L 470 (521)
T TIGR03801 393 LFALMD-KENAYKAETKDICRRREKLLFRGLG-LPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRL 470 (521)
T ss_pred HHHHhc-cchhHHHHHHHHHHHHHHHHHHhcC-CCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHH
Confidence 444554 3446789999999999999999982 22333456789999999972 1467899999
Q ss_pred HHhcCeEEeCCCCcCCCCCCeEEEEeec-CHHHHHHHHHHHHhhC
Q 013521 398 LEKTHILTIPGSGFGPGGNEHIRVSAFG-HREYISEACRRLKNFL 441 (441)
Q Consensus 398 l~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~~~~~~l~~l~~~l 441 (441)
++++||.+.||..|+.. ++++|+|+++ +++++.++.++|++++
T Consensus 471 ~~e~gV~v~PG~~Fg~~-~~~vRisla~l~~~~~~~~~~rl~~~~ 514 (521)
T TIGR03801 471 AEETGIVLLPGGGFGGP-EWSVRVSLANLNEYDYAEIGRAIRKIL 514 (521)
T ss_pred HHhCCEEEeCchhcCCC-CCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999863 6789999975 8889999999998763
No 67
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-47 Score=376.34 Aligned_cols=340 Identities=16% Similarity=0.205 Sum_probs=263.6
Q ss_pred CCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhh--CCCCCCcEE--EcCCcHH
Q 013521 72 ARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKD--MGIEGDEIF--ISDGAQS 146 (441)
Q Consensus 72 ~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~--~~~~~~~I~--~t~G~~~ 146 (441)
+++++|+.|.| +.+++....+++.+++..........+|++..|.++||+++|+|+.+. ..+++++|+ .|+|+++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~ 108 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG 108 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence 47899999986 465666666777776644322245578999999999999999998652 346889999 5999999
Q ss_pred HHHHH-H---HhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--------CCC
Q 013521 147 DISRL-Q---MLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--------TSR 214 (441)
Q Consensus 147 al~~l-~---~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--------~~~ 214 (441)
++.++ . .+++|||+|++++|+|+.|...++..| .+++.+++.+++++..+.+. .++
T Consensus 109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G------------~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~ 176 (404)
T PTZ00376 109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAG------------LNVKEYRYYDPKTKGLDFDGMLEDLRTAPNG 176 (404)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcC------------CceeeccccCcccCCcCHHHHHHHHHhCCCC
Confidence 98864 2 567999999999999999999999999 58999998543334333221 134
Q ss_pred ccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC---CCCcccccCCCcceeEEEecCCcccCCc
Q 013521 215 TDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP---SPRSIYEIPGAREVAIEISSFSKFAGFT 291 (441)
Q Consensus 215 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~---~~~~~~~~~~~~~~~i~i~S~SK~~~~~ 291 (441)
+++++++|||||||.++|.+++++|+++|++|+++||+||+|.+|.+++ .+.++..+....+++|+++||||.|++|
T Consensus 177 ~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~ 256 (404)
T PTZ00376 177 SVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLY 256 (404)
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccccc
Confidence 5666778999999999999999999999999999999999999998854 1223444433346899999999999999
Q ss_pred cceeEEE---EeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-----HHHHHHHHHHHHHHHHHHH
Q 013521 292 GVRLGWT---VVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-----QALRTVIDYYKENAKIIVD 363 (441)
Q Consensus 292 G~r~G~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~ 363 (441)
|+|+||+ +++++++. .+.+.+.......+.+++.++|.++.+++++..+ .++++.++.++++++.+.+
T Consensus 257 GlRvG~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~ 332 (404)
T PTZ00376 257 GERIGALHIVCANKEEAA----NVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYD 332 (404)
T ss_pred ccccceEEEEeCCHHHHH----HHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 45665420 0122333333444555678899999999986432 3467778899999999999
Q ss_pred HHHhCC----CeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee-cCHHHHHHHHHHHH
Q 013521 364 AFQSLG----LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF-GHREYISEACRRLK 438 (441)
Q Consensus 364 ~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~~~~~~l~~l~ 438 (441)
.|++++ +.+..+.+|+|+|++++ .+++.+|++++||.+.|| + |++++ .+++++++++++|+
T Consensus 333 ~L~~~~~~~~~~~~~p~gg~f~~~~~~----~~~~~~L~~~~~v~v~p~--------~--Ris~~~~~~~~~~~~~~~l~ 398 (404)
T PTZ00376 333 ELKALGSPGDWEHIINQIGMFSFTGLT----KEQVERLIEKYHIYLLDN--------G--RISVAGLTSKNVDYVAEAIH 398 (404)
T ss_pred HHHhcCCCCcccccccCceEEEecCCC----HHHHHHHHHhCCEeecCC--------C--eEEEeccCHHhHHHHHHHHH
Confidence 999874 44556789999999884 578899999989999997 1 99996 58999999999998
Q ss_pred hhC
Q 013521 439 NFL 441 (441)
Q Consensus 439 ~~l 441 (441)
+++
T Consensus 399 ~~~ 401 (404)
T PTZ00376 399 DVV 401 (404)
T ss_pred HHH
Confidence 763
No 68
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=4.9e-47 Score=372.24 Aligned_cols=336 Identities=18% Similarity=0.212 Sum_probs=258.8
Q ss_pred CCeEEeCCCC---CCCCCc--HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhh--CCCCCCcE--EEcC
Q 013521 72 ARLIRLGIGD---TTQPIP--DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKD--MGIEGDEI--FISD 142 (441)
Q Consensus 72 ~~~i~l~~g~---~~~~~~--~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~--~~~~~~~I--~~t~ 142 (441)
+++|+|+.|. ++..+| +.+.+++.+.+.. ....+|++..|.++||+++++|+.+. ..+++++| ++|+
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~----~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~ 101 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET----ETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTP 101 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhccc----ccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecC
Confidence 4689999996 333344 6677777775542 34557999999999999999999753 22578887 9999
Q ss_pred CcHHHHHHH-HHh--cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-------C
Q 013521 143 GAQSDISRL-QML--LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-------T 212 (441)
Q Consensus 143 G~~~al~~l-~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-------~ 212 (441)
|+++|+.++ ..+ ++|||+|++++|+|+++...++..| .+++.++...++++.++++. .
T Consensus 102 Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g------------~~~v~v~~~~~~~~~~d~~~l~~~~~~~ 169 (396)
T PRK09257 102 GGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAG------------LEVKTYPYYDAATKGLDFDAMLADLSQA 169 (396)
T ss_pred CccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcC------------CcEEEEeccccccCccCHHHHHHHHHhC
Confidence 999999984 333 5899999999999999999999999 58899987322233334321 1
Q ss_pred -CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC-CC-CCcccccCCCcceeEEEecCCcccC
Q 013521 213 -SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD-PS-PRSIYEIPGAREVAIEISSFSKFAG 289 (441)
Q Consensus 213 -~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~-~~-~~~~~~~~~~~~~~i~i~S~SK~~~ 289 (441)
.+..+++++|||||||.++|.+++++|+++|++||++||+||+|.++.++ +. +.++..+++..+++|+++||||.++
T Consensus 170 ~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~ 249 (396)
T PRK09257 170 PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFG 249 (396)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCc
Confidence 23445555799999999999999999999999999999999999998865 22 3445455434468999999999999
Q ss_pred CccceeEEEEe--ec-cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCc-----HHHHHHHHHHHHHHHHHH
Q 013521 290 FTGVRLGWTVV--PE-ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDG-----FQALRTVIDYYKENAKII 361 (441)
Q Consensus 290 ~~G~r~G~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l 361 (441)
++|+|+||+++ ++ +.+. +....+.......+.+++.+.|.++.+++.+.. .++++++++.|+++++.+
T Consensus 250 ~~GlRiG~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l 325 (396)
T PRK09257 250 LYGERVGALSVVAEDAEEAD----RVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLL 325 (396)
T ss_pred cccccceeEEEEeCCHHHHH----HHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999984 22 2210 012333333334555578899998989998643 257888999999999999
Q ss_pred HHHHHhCC----CeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee-cCHHHHHHHHHH
Q 013521 362 VDAFQSLG----LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF-GHREYISEACRR 436 (441)
Q Consensus 362 ~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~~~~~~l~~ 436 (441)
.+.|++++ +.+..+++|+|+|++++ .+++.++++++||.+.|. + ||+++ .+++++++++++
T Consensus 326 ~~~L~~~~~~~~~~~~~p~gg~~~w~~l~----~~~~~~l~~~~~V~~~p~--------~--ri~~~~~~~~~i~~~~~~ 391 (396)
T PRK09257 326 VEALKAKGPSRDFDFIARQRGMFSYSGLT----PEQVDRLREEFGVYAVGS--------G--RINVAGLNESNIDYVAEA 391 (396)
T ss_pred HHHHHhcCCCCCcccccccceEEEecCCC----HHHHHHHHHcCCEEEcCC--------C--eEEEeeCCHHHHHHHHHH
Confidence 99999874 56677889999999984 367788888999999872 2 99996 589999999999
Q ss_pred HHhhC
Q 013521 437 LKNFL 441 (441)
Q Consensus 437 l~~~l 441 (441)
|++++
T Consensus 392 i~~~~ 396 (396)
T PRK09257 392 IAAVL 396 (396)
T ss_pred HHhhC
Confidence 99875
No 69
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.5e-47 Score=367.25 Aligned_cols=321 Identities=19% Similarity=0.331 Sum_probs=259.1
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
..++|+|+.|++++++|+.+.+++.+.+.. ...| |+.|..+||++||+|+ ++++++|++|+|+++++.+
T Consensus 28 ~~~~i~l~~nen~~~~~~~v~~a~~~~~~~------~~~Y-p~~g~~~Lr~aia~~~----~~~~~~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 28 DHSFVKLASNENPFGCSPRVLDELQKSWLD------HALY-PDGGATTLRQTIANKL----HVKMEQVLCGSGLDEVIQI 96 (366)
T ss_pred CCceEEeCCCCCCCCCCHHHHHHHHHHHHh------cCcC-CCCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHH
Confidence 357899999999999999999999887643 1246 5679999999999997 7899999999999999998
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCc
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNP 226 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NP 226 (441)
+..++++||.|++++|+|+.|...+...| .+++.++++. +.++++ ++. .++++++++||||||
T Consensus 97 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g------------~~v~~v~~~~-~~~d~~~l~~~~~~~~~~v~i~~P~NP 163 (366)
T PRK01533 97 ISRAVLKAGDNIVTAGATFPQYRHHAIIEG------------CEVKEVALNN-GVYDLDEISSVVDNDTKIVWICNPNNP 163 (366)
T ss_pred HHHHhcCCCCEEEEcCCcHHHHHHHHHHcC------------CEEEEeecCC-CCcCHHHHHHHhCcCCcEEEEeCCCCC
Confidence 56678999999999999999999999998 5888898853 233222 221 357899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccc
Q 013521 227 TGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRY 306 (441)
Q Consensus 227 tG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~ 306 (441)
||.+++.+++++|+++|++++ ++|+||+|.+|.+++...+.....+..+++|+++||||.||+||+|+||+++++++
T Consensus 164 TG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~-- 240 (366)
T PRK01533 164 TGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEEL-- 240 (366)
T ss_pred CCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHH--
Confidence 999999999999999998876 56679999988765322222222123468999999999999999999999999877
Q ss_pred cCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcC
Q 013521 307 SNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFP 386 (441)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 386 (441)
++.+..... ..+++.++|.++.++|++ ..+.+..++.++++++.+.+.|+.+|+++.++ +|+|+|++++
T Consensus 241 ------~~~l~~~~~--~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~-~~nf~~~~~~ 309 (366)
T PRK01533 241 ------IEKLNVVRL--PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKENEIPFYQS-QTNFIFLPVE 309 (366)
T ss_pred ------HHHHHHhcC--CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-cCcEEEEeCC
Confidence 456665442 356899999999999974 45667888888899999999998888888764 7899999996
Q ss_pred CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 387 GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 387 ~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+..++...+++ +||.|++ | ++++||++ .++++.+.++++|+++
T Consensus 310 --~~~~~~~~l~~-~GI~Vr~---~----~~~iRis~-~~~~~~~~l~~al~~~ 352 (366)
T PRK01533 310 --NGGEIYEACAH-AGFIIRP---F----PNGVRITV-GTREQNEGVISVLQQH 352 (366)
T ss_pred --CHHHHHHHHHH-CCcEEcc---C----CCceEEeC-CCHHHHHHHHHHHHHH
Confidence 45667676665 6999998 4 46899997 4567778888888764
No 70
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-45 Score=360.71 Aligned_cols=342 Identities=24% Similarity=0.378 Sum_probs=273.3
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al 148 (441)
..++++|+.|.|++++|+.+.+++.+.++... ....+|++..|..++|+++|+|+.+ +.++++++|++|+|+++++
T Consensus 32 ~~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al 109 (394)
T PRK06836 32 ADNVFDFSLGNPSVPPPAAVKEALRELAEEED--PGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGAL 109 (394)
T ss_pred CCCeEEecCcCCCCCCCHHHHHHHHHHHhcCC--cCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHH
Confidence 35689999999888888999999988776432 2356898889999999999999975 5567899999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcC
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCS 222 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~ 222 (441)
.+ +..++++||.|++++|+|+.+...++..| .+++.++.+++ ++..++++ .++++++++++
T Consensus 110 ~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g------------~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~ 176 (394)
T PRK06836 110 NVALKAILNPGDEVIVFAPYFVEYRFYVDNHG------------GKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINS 176 (394)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcC------------CEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeC
Confidence 97 67778999999999999999998888888 58999998764 23334322 36799999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHH------cCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCcccee
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKA------NGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRL 295 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~------~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~ 295 (441)
||||||.++|.+++++|+++|++ ||++||+||+|.++.+++. ..++.. ..+++++++||||.+|+||+|+
T Consensus 177 p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~---~~~~~i~~~S~SK~~~~pGlRi 253 (394)
T PRK06836 177 PNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK---YYDNSIVVYSFSKSLSLPGERI 253 (394)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH---ccCcEEEEecchhhccCcceee
Confidence 99999999999999999999999 8999999999999887642 223322 2467999999999999999999
Q ss_pred EEEEeeccccccCCchhHHHHHHHHhh-hcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 013521 296 GWTVVPEELRYSNGYPVIKDFNRIVCT-CFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNG 374 (441)
Q Consensus 296 G~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 374 (441)
||++++++... .......+...... ....++.+.|.++..++.+. ..++.++++++.+.+.|+++|+.+..
T Consensus 254 G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~r~~l~~~L~~~g~~~~~ 325 (394)
T PRK06836 254 GYIAVNPEMED--ADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYKRNRDLLYDGLTELGFECVK 325 (394)
T ss_pred EEEecCHHHhh--hHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHhCCCEeec
Confidence 99999876521 00001111111111 22357788999888888752 13567888999999999999998888
Q ss_pred CCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 375 GKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+.+|+|+|++++..++.++++.+ +++||.+.||+.|+. .+++||+++.+++++++++++|++++
T Consensus 326 ~~gg~~~~~~~~~~~~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRi~~~~~~~~~~~~i~~l~~~l 389 (394)
T PRK06836 326 PQGAFYLFPKSPEEDDVAFCEKA-KKHNLLLVPGSGFGC--PGYFRLSYCVDTETIERSLPAFEKLA 389 (394)
T ss_pred CCceEEEEEeCCCCCHHHHHHHH-HhCCEEEECchhcCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 88899999999765666777554 566999999999864 57999999888999999999999864
No 71
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=5.7e-46 Score=358.87 Aligned_cols=323 Identities=19% Similarity=0.300 Sum_probs=257.0
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
+.++++|+.|++++++|+.+.+++.+.+.. ..+|++..|..++|+++|+|+ ++++++|++|+|+++++.+
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~g~~~lr~aia~~~----~~~~~~I~it~Ga~~al~~ 90 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGD------LAAYPSTEDERRARAAVAARH----GRTPDEVLLLAGAAEGFAL 90 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhH------hhcCCCccchHHHHHHHHHHh----CcChhhEEECCCHHHHHHH
Confidence 467999999999999999999999998753 246877789999999999997 7899999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-CCCccEEEEcCCCCcccc
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-TSRTDIIFFCSPNNPTGH 229 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-~~~~~~v~i~~p~NPtG~ 229 (441)
+.. +++| .++++.|+|+.+...++..| .+++.++++.+ +..+.+. .+++++++++|||||||.
T Consensus 91 ~~~-l~~~-~viv~~P~y~~~~~~~~~~G------------~~i~~v~~~~~--~~~d~~~l~~~~~~i~l~np~NPTG~ 154 (349)
T PRK07908 91 LAR-LRPR-RAAVVHPSFTEPEAALRAAG------------IPVHRVVLDPP--FRLDPAAVPDDADLVVIGNPTNPTSV 154 (349)
T ss_pred HHh-cCCC-eEEEeCCCChHHHHHHHHcC------------CEEEeeccCcc--cCcChhHhccCCCEEEEcCCCCCCCC
Confidence 655 6775 56778999999998888888 58899988754 3333332 357899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCC
Q 013521 230 AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNG 309 (441)
Q Consensus 230 ~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~ 309 (441)
++|.++ |.++|+ ++.++|+||+|+++..+ .+.++... ..+++++++||||.||+||+|+||+++++++
T Consensus 155 ~~~~~~---l~~l~~-~~~~iIvDe~y~~~~~~-~~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~----- 222 (349)
T PRK07908 155 LHPAEQ---LLALRR-PGRILVVDEAFADAVPG-EPESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALGAPDV----- 222 (349)
T ss_pred CcCHHH---HHHHHh-cCCEEEEECcchhhccC-Cccccccc--cCCCEEEEeecccccCCccceeeeeecCHHH-----
Confidence 999665 455565 47788899999987543 34455443 2457999999999999999999999998877
Q ss_pred chhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCC
Q 013521 310 YPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSS 389 (441)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 389 (441)
++.+..... ....+.+.+.++.+++.+...+++++.++.++++++.+.+.|+++++++.++++|+|+|+++++
T Consensus 223 ---~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~~~~~~-- 295 (349)
T PRK07908 223 ---LARLTRGRA--HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVPD-- 295 (349)
T ss_pred ---HHHHHhcCC--CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEEEECCc--
Confidence 355554332 2346777787777777644557889999999999999999999888888877899999999974
Q ss_pred hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 390 SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 390 ~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
. +.+..+++++||.+.||+.|+..++++|||++. ++++++++++.|+++
T Consensus 296 ~-~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~ 344 (349)
T PRK07908 296 A-ELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEI 344 (349)
T ss_pred H-HHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHH
Confidence 3 445555667799999999996555789999984 556667777776654
No 72
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.2e-46 Score=358.80 Aligned_cols=314 Identities=18% Similarity=0.272 Sum_probs=246.6
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQ 152 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~ 152 (441)
.+++|+.++++++.. .....| |+.-..+||+++|+|+ ++++++|++|+|+++++.++.
T Consensus 17 ~~i~l~~Nenp~~~~-----------------~~~~~Y-p~~~~~~lr~~ia~~~----~~~~~~I~it~Gs~~~l~~~~ 74 (332)
T PRK06425 17 RIIDFSANINDFMDI-----------------GDISIY-PEISYTDIEDQIKIYT----QGLKIKVLIGPGLTHFIYRLL 74 (332)
T ss_pred CEEEeccccCCCcCh-----------------hhcccC-cCcCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHH
Confidence 589999999876310 223458 4556899999999996 889999999999999999865
Q ss_pred HhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCC
Q 013521 153 MLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAAT 232 (441)
Q Consensus 153 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~ 232 (441)
.++++|+ |++++|+|+.|...++..| .+++.+|++.. +...+..+..+++++++||||||||.++|
T Consensus 75 ~~~~~~~-vv~~~P~y~~y~~~~~~~G------------~~v~~vp~~~~-~~~~~~l~~~~~k~v~l~nP~NPTG~~~s 140 (332)
T PRK06425 75 SYINVGN-IIIVEPNFNEYKGYAFTHG------------IRISALPFNLI-NNNPEILNNYNFDLIFIVSPDNPLGNLIS 140 (332)
T ss_pred HHhCCCc-EEEeCCChHHHHHHHHHcC------------CeEEEEeCCcc-cCcHHHHhhcCCCEEEEeCCCCCcCCccC
Confidence 6778874 6667999999999999999 58999998652 22222222358899999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchh
Q 013521 233 WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPV 312 (441)
Q Consensus 233 ~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~ 312 (441)
.+++++|+++|++|+++||+||+|.+|.+++. .+...+.+..+++|+++||||.+|+||+|+||+++|+++
T Consensus 141 ~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~l-------- 211 (332)
T PRK06425 141 RDSLLTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYN-------- 211 (332)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHH--------
Confidence 99999999999999999999999999987542 234444333468999999999999999999999999887
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCChH
Q 013521 313 IKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSW 391 (441)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (441)
++.+..... ....+.+++. ++..... .++++.++.++++++.+.+.|+++|+.+..+++|+|+|++++ ++.
T Consensus 212 i~~l~~~~~--~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~--~~~ 283 (332)
T PRK06425 212 MKISRKITE--PWSVCDPAID----FIRSIDLDYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMIP--DAH 283 (332)
T ss_pred HHHHHHcCC--CCccCHHHHH----HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEEcC--CHH
Confidence 355554322 1223433332 2322222 456788999999999999999998888765568999999987 567
Q ss_pred HHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 392 DVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 392 ~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
++.+.++++ ||.++||+.|+..++++|||+++ ++++.+.+++.|++++
T Consensus 284 ~~~~~l~~~-gi~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 284 DFYSYLLKN-GILVRLLDDYECLGEQYIRIAIR-RRSFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHHC-CeEEEECCCCCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence 888887765 99999999997656789999985 5678889999888764
No 73
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=8.9e-46 Score=386.19 Aligned_cols=340 Identities=13% Similarity=0.184 Sum_probs=268.2
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCC---CcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEG---DEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~---~~I~~t~G~~~a 147 (441)
+.++|+|++|+|++++|+.+.+++.+++.+. ++ ..|.+++|++|++|+.+.+|++. ++|++|+|++++
T Consensus 696 g~~vI~LsinE~d~ppPp~V~eAi~eal~~~-------~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el 766 (1082)
T PLN02672 696 ESSLIHMDVDESFLPVPSAVKASIFESFVRQ-------NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL 766 (1082)
T ss_pred CCCEEEEeCCCCCCCCCHHHHHHHHHHHhhc-------CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence 3579999999999999999999999877531 12 23567789999999987445543 489999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CC-CccEEEE
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TS-RTDIIFF 220 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~-~~~~v~i 220 (441)
+.. +..+++|||.|++++|+|+.|...++..| .+++.++++++++|.++.+. .. +.++|++
T Consensus 767 L~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~G------------a~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L 834 (1082)
T PLN02672 767 FNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLK------------ANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYI 834 (1082)
T ss_pred HHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcC------------CEEEEEecccccCCCCCHHHHHHHhccCCCCEEEE
Confidence 987 67788999999999999999999999999 58999999766677776422 12 3468899
Q ss_pred cCCC-CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC---ccc----ccCCC--cceeEEEecCCcccCC
Q 013521 221 CSPN-NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR---SIY----EIPGA--REVAIEISSFSKFAGF 290 (441)
Q Consensus 221 ~~p~-NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~---~~~----~~~~~--~~~~i~i~S~SK~~~~ 290 (441)
|||| ||||.++|.+++++|+++|++||++||+||+|+++.+++.+. ++. .++.. ..++++++||||.+++
T Consensus 835 ~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~l 914 (1082)
T PLN02672 835 SGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLS 914 (1082)
T ss_pred ECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhcc
Confidence 9996 999999999999999999999999999999999888864321 111 12111 2479999999999999
Q ss_pred ccceeEEEEeeccccccCCchhHHHHHHHHhhhc-CCCcHHHHHHHHHhcC--CCcH-HHHHHHHHHHHHHHHHHHHHHH
Q 013521 291 TGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCF-NGASNIVQAGGLACLS--PDGF-QALRTVIDYYKENAKIIVDAFQ 366 (441)
Q Consensus 291 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~--~~~~-~~~~~~~~~~~~~~~~l~~~L~ 366 (441)
||+|+||++++++.+ ++.+........ ...+..++.++.+++. +..+ .++++.++.++++++.+.+.|+
T Consensus 915 pGLRIGylIap~~eL-------i~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~ 987 (1082)
T PLN02672 915 GGHEFGFLALNDSVL-------IDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLE 987 (1082)
T ss_pred HHHHheeEEeCCHHH-------HHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987632 455554332221 1122333444444442 2223 5788889999999999999999
Q ss_pred hCCCeeeCCCCceEEEEEcC------------------CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHH
Q 013521 367 SLGLKVNGGKNAPYVWVQFP------------------GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHRE 428 (441)
Q Consensus 367 ~~g~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~ 428 (441)
++|+.+.+|.+|+|+|++++ +.++.++.+.+++++||.+.||+.|+. ++++||+++.+++
T Consensus 988 ~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~--~g~~RIsfa~~~e 1065 (1082)
T PLN02672 988 ACGWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI--PGYCRFSFALEDS 1065 (1082)
T ss_pred HCCCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC--CCeEEEEecCCHH
Confidence 99999988889999999763 125678889999888999999988764 6799999988889
Q ss_pred HHHHHHHHHHhh
Q 013521 429 YISEACRRLKNF 440 (441)
Q Consensus 429 ~~~~~l~~l~~~ 440 (441)
++++++++|+++
T Consensus 1066 ~LeeALerL~kf 1077 (1082)
T PLN02672 1066 EFDRALKAIARF 1077 (1082)
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 74
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1e-45 Score=357.68 Aligned_cols=328 Identities=19% Similarity=0.247 Sum_probs=261.6
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
+.++++|+.|++++++|+.+.+++.+.+... ..|++ .+..++|+++|+++ ++++++|++|+|+++++.+
T Consensus 19 ~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~------~~y~~-~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~ 87 (356)
T PRK08056 19 PDQLLDFSANINPLGMPVSLKRAIIDNLDCA------ERYPD-VEYRHLHQALARHH----QVPASWILAGNGETESIFA 87 (356)
T ss_pred hhhEEEeccccCCCCCCHHHHHHHHHHHHhc------ccCcC-ccHHHHHHHHHHHh----CcChhhEEECCCHHHHHHH
Confidence 3568999999999999999999999877532 25754 57899999999997 7899999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC--C--CCCccEEEEcCCCCc
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS--T--TSRTDIIFFCSPNNP 226 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~--~--~~~~~~v~i~~p~NP 226 (441)
+...+.+|+ +++++|+|+.+...++..| .+++.++.++++++.++.. . .+++++++++|||||
T Consensus 88 ~~~~l~~g~-viv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NP 154 (356)
T PRK08056 88 VVSGLKPRR-AMIVTPGFAEYRRALQQVG------------CEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNP 154 (356)
T ss_pred HHHHhCCCC-EEEeCCCcHHHHHHHHHcC------------CeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCC
Confidence 554557876 6778999999999999998 5899999876656655421 1 368899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccc
Q 013521 227 TGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELR 305 (441)
Q Consensus 227 tG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~ 305 (441)
||.+++.+++++|+++|++|+++||+||+|.+|.+++. +.+. +.. .+++++++||||.+|++|+|+||++++++.+
T Consensus 155 TG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~-~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~ 231 (356)
T PRK08056 155 TGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LAD-NPHLWVLRSLTKFYAIPGLRLGYLVNSDDAA 231 (356)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hcc-CCCEEEEEechhhccCcchhheeeecCCHHH
Confidence 99999999999999999999999999999999876542 1122 222 3578999999999999999999999864322
Q ss_pred ccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEEE
Q 013521 306 YSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQ 384 (441)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 384 (441)
.+.+... ....+++.+.|.++.+++.+ ..+.++.++.++++++.+.+.|+++ ++.+.+ ++|+|+|++
T Consensus 232 -------~~~l~~~--~~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~~~~ 299 (356)
T PRK08056 232 -------VARMRRQ--QMPWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLTVWP-GRANYLFLR 299 (356)
T ss_pred -------HHHHHHh--CCCCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC-CCCcEEEEE
Confidence 3444432 22345778889888888863 3556888999999999999999887 777665 579999999
Q ss_pred cCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 385 FPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 385 ~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
++. ++.+++..+++ +||.+.||+.|.....++|||++. ++++.+.+++.|+++
T Consensus 300 ~~~-~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~~l~~~ 352 (356)
T PRK08056 300 CER-PDIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIR-SAAENERLLAALRNV 352 (356)
T ss_pred cCC-ChHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEc-CHHHHHHHHHHHHHH
Confidence 973 35677777775 599999999996555679999985 456666777666654
No 75
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-46 Score=361.31 Aligned_cols=324 Identities=20% Similarity=0.268 Sum_probs=254.7
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhh----CCCCCCcEEEcCCcHHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKD----MGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~----~~~~~~~I~~t~G~~~al 148 (441)
.+++|+.|+|++++|+.+.+++.+++... ....+|+ +.|..+||++||+|+.+. +.+++++|++|+|+++++
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al 104 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQG---IESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELI 104 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhc---ccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHH
Confidence 58999999999999999999999977641 1234684 579999999999999753 448899999999999999
Q ss_pred HH-HHHhcCCCC-EEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC------C---CCccE
Q 013521 149 SR-LQMLLGSNV-TVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST------T---SRTDI 217 (441)
Q Consensus 149 ~~-l~~l~~~gd-~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~------~---~~~~~ 217 (441)
.. +..++.+|| .|++++|+|+.+...++..| .+++.++++.+ ++.++++. . +++++
T Consensus 105 ~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~~k~ 171 (374)
T PRK02610 105 RSLLIATCLGGEGSILVAEPTFSMYGILAQTLG------------IPVVRVGRDPE-TFEIDLAAAQSAIEQTQNPPVRV 171 (374)
T ss_pred HHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcC------------CEEEEecCCcc-cCCCCHHHHHHHHHhhcCCCceE
Confidence 86 566777886 89999999999999999999 58889987643 34444332 1 57899
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
+++||||||||.++|.+++++|+++| ++++||+||+|.+|.+.. ++..+.. .+++|+++||||.+|+||+|+||
T Consensus 172 i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~---~~~~~~~-~~~~ivi~SfSK~~g~~GlRiG~ 245 (374)
T PRK02610 172 VFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT---LVGELAQ-HPNWVILRTFSKAFRLAAHRVGY 245 (374)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCccc---hHHHHhc-CCCEEEEEecchhccCcccceee
Confidence 99999999999999999999999986 499999999999986432 2222322 35688999999999999999999
Q ss_pred EEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC
Q 013521 298 TVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGK 376 (441)
Q Consensus 298 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 376 (441)
+++++++ ++.+...+. ..+++.+.|.++.+++.+ ...+.+.++..+++ ++.+.+.|+++ ++.+. ++
T Consensus 246 ~v~~~~l--------~~~l~~~~~--~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~-p~ 312 (374)
T PRK02610 246 AIGHPEL--------IAVLEKVRL--PYNLPSFSQLAAQLALEH-RQELLAAIPEILQE-RDRLYQALQELPQLRVW-PS 312 (374)
T ss_pred eecCHHH--------HHHHHHhcC--CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHH-HHHHHHHHHhCCCcEeC-CC
Confidence 9998887 455655442 244788999999888874 23556666666555 67788889877 67654 57
Q ss_pred CceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 377 NAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 377 ~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+|+|+|++++. .++.++.+.+ +++||.+.++ ++++||+++. .+++++++++|++++
T Consensus 313 ~g~f~~~~l~~~~~~~~~~~~l-~~~gi~v~~~-------~~~lRls~~~-~~~~~~~l~~l~~~l 369 (374)
T PRK02610 313 AANFLYLRLSQDAALAALHQAL-KAQGTLVRHT-------GGGLRITIGT-PEENQRTLERLQAAL 369 (374)
T ss_pred cceEEEEeCCCCCCHHHHHHHH-HHCCEEEEeC-------CCeEEEeCCC-HHHHHHHHHHHHHHH
Confidence 89999999974 3556666665 5569999763 4689999865 567899999998764
No 76
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-46 Score=359.62 Aligned_cols=326 Identities=21% Similarity=0.351 Sum_probs=264.6
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR- 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~- 150 (441)
.++++|+.|++++++++.+.+++.+.+.. ..|.+..|..++|+++|+++ ++++++|++|+|+++++.+
T Consensus 29 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-------~~~~p~~g~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~ 97 (359)
T PRK03158 29 EKIVKLASNENPYGPSPKVKEAIAAHLDE-------LALYPDGYAPELRTKVAKHL----GVDEEQLLFGAGLDEVIQMI 97 (359)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHH-------hhcCCCCcHHHHHHHHHHHh----CCCHHHEEECCCHHHHHHHH
Confidence 46899999999888888899999887753 23556789999999999997 7889999999999999997
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCcc
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPT 227 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPt 227 (441)
+..++++||.|++++|+|+.+...+...| .+++.++.+. ++++.+ +++ .+++++++++||||||
T Consensus 98 ~~~~~~~gd~v~~~~p~y~~~~~~~~~~g------------~~~~~~~~~~-~~~d~~~l~~~~~~~~~~v~i~~p~NPt 164 (359)
T PRK03158 98 SRALLNPGTNTVMAEPTFSQYRHNAIIEG------------AEVREVPLKD-GGHDLEAMLKAIDEQTKIVWICNPNNPT 164 (359)
T ss_pred HHHHhCCCCEEEEcCCCHHHHHHHHHHcC------------CeEEEEecCC-CCcCHHHHHHhcCCCCCEEEEeCCCCCC
Confidence 46778999999999999999998888888 5888888862 333221 111 3678999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccc
Q 013521 228 GHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRY 306 (441)
Q Consensus 228 G~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~ 306 (441)
|.++|.+++.++++.|+ +|++||+||+|.++.+++. +..+...+ ..+++++++||||.+|+||+|+||+++++++
T Consensus 165 G~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~-- 240 (359)
T PRK03158 165 GTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLE-KYENLIVLRTFSKAYGLAALRVGYGIASEEL-- 240 (359)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHH-hcCCEEEEEechHhhcCcchhhehhcCCHHH--
Confidence 99999998888888774 6999999999999877543 22222222 3468999999999999999999999999887
Q ss_pred cCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcC
Q 013521 307 SNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFP 386 (441)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 386 (441)
++.+..... ..+++.++|.++.+++++ ..++++.++.++++++.+.+.|+++|+.+.+ ++|+|+|++++
T Consensus 241 ------~~~~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~g~~i~~~~~ 309 (359)
T PRK03158 241 ------IEKLNIARP--PFNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYYP-SQTNFIFVDTG 309 (359)
T ss_pred ------HHHHHHhcC--CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCC-CcCcEEEEECC
Confidence 455655443 245799999999999974 3567788888999999999999988887765 57899999985
Q ss_pred CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 387 GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 387 ~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
.++.++.+.+++ +||.+.||+.|+ .++++||+++ ++++.++++++|++++
T Consensus 310 -~~~~~~~~~l~~-~gv~v~~g~~f~--~~~~iRi~~~-~~~~~~~l~~al~~~~ 359 (359)
T PRK03158 310 -RDANELFEALLK-KGYIVRSGAALG--FPTGVRITIG-LKEQNDKIIELLKELL 359 (359)
T ss_pred -CCHHHHHHHHHH-CCeEEeeCCCCC--CCCeEEEecC-CHHHHHHHHHHHHHhC
Confidence 356778888775 599999999996 3579999975 7888999999998864
No 77
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=2.7e-46 Score=363.77 Aligned_cols=336 Identities=29% Similarity=0.479 Sum_probs=272.8
Q ss_pred CeEEeCCCCCCCC----CcHHHHHHHHH-HHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCC-cEEEcCCc
Q 013521 73 RLIRLGIGDTTQP----IPDIITSAMAE-HAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGD-EIFISDGA 144 (441)
Q Consensus 73 ~~i~l~~g~~~~~----~~~~~~~al~~-~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~-~I~~t~G~ 144 (441)
++|+|+.|+++.. +++...+++.+ ... ......|++..|.++||+++|+|+.+ ++.++++ +|++++|+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~ 77 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAAT----SSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGA 77 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHH----HTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhc----ccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccc
Confidence 5899999998765 34444444443 121 26677899999999999999999974 6667888 99999999
Q ss_pred HHHHHHH-HHh-cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CC----
Q 013521 145 QSDISRL-QML-LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TS---- 213 (441)
Q Consensus 145 ~~al~~l-~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~---- 213 (441)
++++..+ ..+ .++||.|++++|+|+++...++..| .+++.++++.+.++..+++. .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 145 (363)
T PF00155_consen 78 QAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLG------------AEVIPVPLDSENDFHLDPEALEEALDELPSK 145 (363)
T ss_dssp HHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTT------------SEEEEEEEEETTTTEETHHHHHHHHHTSHTT
T ss_pred ccchhhhhhcccccccccceecCCccccccccccccC------------ceeeecccccccccccccccccccccccccc
Confidence 9999985 455 5799999999999999999999999 58888887654454444322 11
Q ss_pred --CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCc-ccccCCCcceeEEEecCCcccC
Q 013521 214 --RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRS-IYEIPGAREVAIEISSFSKFAG 289 (441)
Q Consensus 214 --~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~-~~~~~~~~~~~i~i~S~SK~~~ 289 (441)
+++++++++||||||.++|.+++++|+++|++||++||+||+|.++.++.. ..+ ...++. ..++++++||||.||
T Consensus 146 ~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g 224 (363)
T PF00155_consen 146 GPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDE-DDNVIVVGSLSKSFG 224 (363)
T ss_dssp TETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTT-TSTEEEEEESTTTTT
T ss_pred ccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccc-cccceeeeecccccc
Confidence 578999999999999999999999999999999999999999999888753 222 233333 334899999999999
Q ss_pred CccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH--HHHHHHHHHHHHHHHHHHHHHHh
Q 013521 290 FTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF--QALRTVIDYYKENAKIIVDAFQS 367 (441)
Q Consensus 290 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~ 367 (441)
++|+|+||+++++++ ++.+........ .+.+.|.++.+++.+... ++++++++.++++++.+.+.|++
T Consensus 225 ~~GlRvG~i~~~~~~--------~~~l~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 294 (363)
T PF00155_consen 225 LPGLRVGYIVAPPEL--------IERLRRFQRSGL--SSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEE 294 (363)
T ss_dssp SGGGTEEEEEEEHHH--------HHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhh--------hhhhhhcccccc--ccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Confidence 999999999998877 456665544333 378888888888875543 38899999999999999999999
Q ss_pred CCCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe-ecCHHHHHHHHHHH
Q 013521 368 LGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA-FGHREYISEACRRL 437 (441)
Q Consensus 368 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~-~~~~~~~~~~l~~l 437 (441)
.|+.+.++++|+|+|+.++..++.++.++|++++||.+.||..|+. +++||+++ ..+++++++++++|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 295 IGITVLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGV--PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp TTSEEEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred hhhheeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHHHHHHHhhC
Confidence 9999988889999999997545678999999888999999999887 78999999 56899999999986
No 78
>PLN02397 aspartate transaminase
Probab=100.00 E-value=2.7e-45 Score=361.38 Aligned_cols=342 Identities=14% Similarity=0.170 Sum_probs=253.0
Q ss_pred CCCCeEEeCCCC-CCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCC--CCCCcE-----EEc
Q 013521 70 PDARLIRLGIGD-TTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMG--IEGDEI-----FIS 141 (441)
Q Consensus 70 ~~~~~i~l~~g~-~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~I-----~~t 141 (441)
.....++|+.|. ++...++.+.+++.++...........+|++..|.++||+++++|+.+... .++++| +.+
T Consensus 46 ~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g 125 (423)
T PLN02397 46 PSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSG 125 (423)
T ss_pred CCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccc
Confidence 345689999997 555455555555555543321114455899999999999999999865211 223333 344
Q ss_pred CCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC----C----CC
Q 013521 142 DGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS----T----TS 213 (441)
Q Consensus 142 ~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~----~----~~ 213 (441)
+|+.+.+..+..++.|||+|++++|+|+.|...++..| .+++.+++..++++..|++ . .+
T Consensus 126 ~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g------------~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~ 193 (423)
T PLN02397 126 TGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAG------------VPVRTYRYYDPKTRGLDFDGLLEDLKAAPD 193 (423)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcC------------CeEEEeecccCcCCccCHHHHHHHHHhCCC
Confidence 44443333456666799999999999999999999999 5888888743223444432 1 24
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC---CCCcccccCCCcceeEEEecCCcccCC
Q 013521 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP---SPRSIYEIPGAREVAIEISSFSKFAGF 290 (441)
Q Consensus 214 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~---~~~~~~~~~~~~~~~i~i~S~SK~~~~ 290 (441)
+++++++++||||||.++|.+++++|+++|++||++||+||+|.+|.+++ .+.++..+....+++|+++||||.+++
T Consensus 194 ~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~ 273 (423)
T PLN02397 194 GSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGL 273 (423)
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCC
Confidence 67788888999999999999999999999999999999999999998854 223444443334579999999999999
Q ss_pred ccceeEEEE--e-eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-----HHHHHHHHHHHHHHHHHH
Q 013521 291 TGVRLGWTV--V-PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-----QALRTVIDYYKENAKIIV 362 (441)
Q Consensus 291 ~G~r~G~l~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~ 362 (441)
+|+|+||++ + +++.+. ++...+.......+.+++.+.|.++.+++++..+ ++++++++.++++++.+.
T Consensus 274 ~G~RvG~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~ 349 (423)
T PLN02397 274 YGERVGALSVVCKSADVAV----RVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLY 349 (423)
T ss_pred ccccceEEEEEeCCHHHHH----HHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999995 4 333320 0122333333344555788899988888886431 347889999999999999
Q ss_pred HHHHhCC----CeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee-cCHHHHHHHHHHH
Q 013521 363 DAFQSLG----LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF-GHREYISEACRRL 437 (441)
Q Consensus 363 ~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~-~~~~~~~~~l~~l 437 (441)
+.|+++| +.+..|++|+|+|++++ .+++.+|++++||.+.++ + |++++ .+++++++++++|
T Consensus 350 ~~L~~~~~~~~~~~~~p~gg~fl~~~l~----~~~~~~Ll~~~~V~v~~~--------~--Ri~~~~~~~~~i~~~~~~i 415 (423)
T PLN02397 350 DALEARGSPGDWSHITKQIGMFSFTGLN----KEQVDRMTKEYHIYMTRD--------G--RISMAGLSSKNVPYLADAI 415 (423)
T ss_pred HHHHhcCCCCCCCcccCCceEEEecCCC----HHHHHHHHHhCCEEECCC--------C--eEEEeeCCHHHHHHHHHHH
Confidence 9999986 77777889999999984 469999999999999631 2 99996 6899999999999
Q ss_pred HhhC
Q 013521 438 KNFL 441 (441)
Q Consensus 438 ~~~l 441 (441)
++++
T Consensus 416 ~~~~ 419 (423)
T PLN02397 416 HAVV 419 (423)
T ss_pred HHHH
Confidence 9864
No 79
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-45 Score=357.73 Aligned_cols=328 Identities=23% Similarity=0.333 Sum_probs=258.0
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
..++++|+.|.+++.+++.+.+++.+... ...+|++..| .+||+++|+++ ++++++|++|+|+++++.+
T Consensus 35 ~~~~i~l~~~~~~~~~~~~~~~al~~~~~------~~~~Y~~~~g-~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~ 103 (371)
T PRK05166 35 VPRIAKLGSNENPLGPSPAVRRAFADIAE------LLRLYPDPQG-RALREAIAART----GVPADRIILGNGSEDLIAV 103 (371)
T ss_pred CcceEEcCCCCCCCCCCHHHHHHHHHHHH------HhhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHH
Confidence 34799999999988888888888887543 2457987778 49999999996 7889999999999999997
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCc
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNP 226 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NP 226 (441)
+..++++||.|+++.|+|+.+...++..| .+++.++.+.+.+++.+ ++. .+++++++++|||||
T Consensus 104 ~~~~~~~~gd~vli~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NP 171 (371)
T PRK05166 104 ICRAVLRPGDRVVTLYPSFPLHEDYPTMMG------------ARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNP 171 (371)
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHHHcC------------CeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCC
Confidence 56678999999999999999998888888 58889988754443322 221 257899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccc-cCCCcceeEEEecCCcccCCccceeEEEEeecccc
Q 013521 227 TGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYE-IPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELR 305 (441)
Q Consensus 227 tG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~ 305 (441)
||.++|.+++++|+++|++ +++||+||+|.+|.+++...+... ++...+++|+++||||.||+||+|+||++++++.+
T Consensus 172 tG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l 250 (371)
T PRK05166 172 VGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPEL 250 (371)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHH
Confidence 9999999999999999874 889999999999886543333333 22234579999999999999999999988754332
Q ss_pred ccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEc
Q 013521 306 YSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQF 385 (441)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 385 (441)
.+.+..... ..+++.++|.++.+++.+. .++++.++.++++++.+.+.|+++|+.+. +++|+|+|+++
T Consensus 251 -------~~~~~~~~~--~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~~~-p~~g~fl~~~~ 318 (371)
T PRK05166 251 -------VGLLDRVRT--PFNVNGAAQAAALAALDDE--EHLAKGVALALAERERLKKELAEMGYRIA-PSRANFLFFDA 318 (371)
T ss_pred -------HHHHHHhcc--CCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCcCeeC-CCcCCEEEEeC
Confidence 455554332 3457889998888888743 56788889999999999999999888765 46899999998
Q ss_pred CCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecC--HHHHHHHHHHHH
Q 013521 386 PGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGH--REYISEACRRLK 438 (441)
Q Consensus 386 ~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~--~~~~~~~l~~l~ 438 (441)
+. ++.++.+.++++ ||.+.||..++ .+++|||+++.. .+.+.++++++.
T Consensus 319 ~~-~~~~l~~~l~~~-gi~v~p~~~~~--~~~~iRi~~~~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 319 RR-PASAVAEALLRQ-GVIVKPWKQPG--FETFIRVSIGSPEENDHFVAALDKVL 369 (371)
T ss_pred CC-CHHHHHHHHHHC-CeEEecCCCCC--CCCeEEEEcCCHHHHHHHHHHHHHHh
Confidence 63 467788877765 99999997643 478999998652 345555655553
No 80
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-45 Score=353.85 Aligned_cols=324 Identities=21% Similarity=0.347 Sum_probs=258.8
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR- 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~- 150 (441)
.++|+|+.|++++++|+.+.+++.+.+.. ...+|++ .|..+||++||+|+ ++++++|++|+|+++++.+
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-----~~~~y~~-~~~~~lr~aia~~~----~~~~~~I~it~G~~~al~~~ 93 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGD-----DLRLYPD-PNADALRQAIAAYY----GLDPEQVFVGNGSDEVLAHA 93 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhh-----hhhcCCC-CcHHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHH
Confidence 46899999999998889999999987763 3457854 47799999999997 7899999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-CCCccEEEEcCCCCcccc
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-TSRTDIIFFCSPNNPTGH 229 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-~~~~~~v~i~~p~NPtG~ 229 (441)
+..++++||+|++++|+|+.+...++..| .+++.++.+++ +.+|++. ...+++++++|||||||.
T Consensus 94 ~~~l~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~--~~~d~~~l~~~~~~v~~~~P~NPtG~ 159 (353)
T PRK05387 94 FLAFFNHDRPLLFPDITYSFYPVYAGLYG------------IPYEEIPLDDD--FSIDVEDYLRPNGGIIFPNPNAPTGI 159 (353)
T ss_pred HHHhcCCCCEEEEeCCCHHHHHHHHHHcC------------CEEEEeecCCC--CCCCHHHHHhcCCEEEEeCCCCCCCC
Confidence 56778999999999999999998888888 58888888643 3334332 135688899999999999
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCC
Q 013521 230 AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNG 309 (441)
Q Consensus 230 ~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~ 309 (441)
++|.+++++|+++++ +++||+||+|.+|... ...++.. ..+++++++||||.+|+||+|+||+++++++
T Consensus 160 ~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~-~~~~~~~---~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~----- 228 (353)
T PRK05387 160 ALPLAEIERILAANP--DSVVVIDEAYVDFGGE-SAIPLID---RYPNLLVVQTFSKSRSLAGLRVGFAIGHPEL----- 228 (353)
T ss_pred CCCHHHHHHHHHhCC--CcEEEEeCcccccCCc-chHHHHh---hCCCEEEEEehhHhhcchhhhceeeecCHHH-----
Confidence 999999999998654 8999999999876422 1222221 2467899999999999999999999998877
Q ss_pred chhHHHHHHHHhhh-cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCC
Q 013521 310 YPVIKDFNRIVCTC-FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGS 388 (441)
Q Consensus 310 ~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 388 (441)
.+.+....... ..+++.+.|.++.+++.+ ..++++.+++++++++.+.+.|+++|+.+. +++++|+|+++++.
T Consensus 229 ---~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~ 302 (353)
T PRK05387 229 ---IEALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVL-PSKANFVFARHPSH 302 (353)
T ss_pred ---HHHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeEC-CCcCcEEEEECCCC
Confidence 45555544322 345788999998888874 345678889999999999999999888765 46889999999865
Q ss_pred ChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 389 SSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 389 ~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
++.++.+.+.+ +||.+.+ |+ +..++++||+++ +.+++++++++|++++
T Consensus 303 ~~~~~~~~l~~-~gi~v~~---~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 303 DAAELAAKLRE-RGIIVRH---FNKPRIDQFLRITIG-TDEEMEALVDALKEIL 351 (353)
T ss_pred CHHHHHHHHHH-CCEEEEE---CCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHh
Confidence 67778877754 5999975 33 234689999986 6689999999998764
No 81
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-44 Score=344.59 Aligned_cols=322 Identities=24% Similarity=0.387 Sum_probs=266.2
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCC-CCCCcEEEcCCcHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMG-IEGDEIFISDGAQSDISR 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~-~~~~~I~~t~G~~~al~~ 150 (441)
+++++|+.|++++++|+.+.+++.+.+.. ...|+ +....++++++++++ + .++++|++++|+++.|.+
T Consensus 22 ~~~i~LssNenP~gp~~~~~~~~~~~~~~------~~rYP-d~~~~~l~~a~a~~~----~~~~~~~V~~gnGsde~i~~ 90 (356)
T COG0079 22 PGIIKLSSNENPYGPPPKVIEAIRAALDK------LNRYP-DPDYRELRAALAEYY----GVVDPENVLVGNGSDELIEL 90 (356)
T ss_pred ccceeecCCCCCCCCCHHHHHHHHHHHHh------hccCC-CCcHHHHHHHHHHHh----CCCCcceEEEcCChHHHHHH
Confidence 36899999999999999999999887753 34684 458899999999997 6 889999999999999998
Q ss_pred H-HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcCCC
Q 013521 151 L-QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSPN 224 (441)
Q Consensus 151 l-~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p~ 224 (441)
+ ..++.+||.|+++.|+|..|...++..| .+++.++..+ |..|++. ..++++|++||||
T Consensus 91 l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g------------~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPN 155 (356)
T COG0079 91 LVRAFVEPGDTVLIPEPTFSMYEIAAQLAG------------AEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPN 155 (356)
T ss_pred HHHHhhcCCCEEEEcCCChHHHHHHHHhcC------------CeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCC
Confidence 5 6678999999999999999999999999 6899999865 4444332 2479999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
||||..++.++++++++.+.+ +.+||+||+|.+|... .++.-.. .++++++++||||+||++|+|+||+++++++
T Consensus 156 NPTG~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~---~~~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~ 230 (356)
T COG0079 156 NPTGTLLPREELRALLEALPE-GGLVVIDEAYIEFSPE---SSLELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIANPEL 230 (356)
T ss_pred CCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc---hhhhhcc-CCCCEEEEEecHHhhhcchhceeeccCCHHH
Confidence 999999999999999999888 9999999999998862 2222222 4577999999999999999999999999888
Q ss_pred cccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eeCCCCceEEEE
Q 013521 305 RYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLK-VNGGKNAPYVWV 383 (441)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~ 383 (441)
++.+.+++. .+++|.+++.++.+++.+. +++++.++...+.++.+.+.|+.+|+. +. |+.++|+++
T Consensus 231 --------i~~l~~vr~--p~~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~-pS~aNFvlv 297 (356)
T COG0079 231 --------IAALNKVRP--PFNVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVF-PSQANFVLV 297 (356)
T ss_pred --------HHHHHHhcC--CCCCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeec-CCCCcEEEE
Confidence 466665543 3448999999999999865 778999999999999999999998855 55 467999999
Q ss_pred EcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 384 QFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 384 ~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+++......+.+.|+++ ||.++.... .+..++|+||++.+.++ .++++++|+++
T Consensus 298 ~~~~~~~~~l~~~L~~~-giivR~~~~-~~~~~~~lRitvgt~ee-n~~ll~AL~~~ 351 (356)
T COG0079 298 RVPDAEAAALAEALLKK-GILVRDCSS-VGLLPGYLRITVGTPEE-NDRLLAALREV 351 (356)
T ss_pred ECCCccHHHHHHHHHHC-CEEEEeCCC-CCCCCCeEEEEeCCHHH-HHHHHHHHHHH
Confidence 99842244666776665 999999765 45567899999865444 48888888765
No 82
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-44 Score=351.29 Aligned_cols=324 Identities=20% Similarity=0.313 Sum_probs=260.2
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCC-CcEEEcCCcHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEG-DEIFISDGAQSDISR 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~I~~t~G~~~al~~ 150 (441)
.++++|+.|++++++|+.+.+++.+.+.. ....+|++ .|..+||+++|+|+ ++++ ++|++|+|+++++.+
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~-~~~~~lr~~ia~~~----~~~~~~~I~~t~G~~~~i~~ 96 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAE----VALNRYPD-PRAAALKAALRAAM----GVPAGADVLLGNGSDELIQL 96 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhc----cccccCCC-CCHHHHHHHHHHHh----CcCCCCcEEEcCCHHHHHHH
Confidence 47999999999999999999999998753 34567865 68899999999997 5554 599999999999998
Q ss_pred H-HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC---CCCccEEEEcCCCC
Q 013521 151 L-QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST---TSRTDIIFFCSPNN 225 (441)
Q Consensus 151 l-~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~---~~~~~~v~i~~p~N 225 (441)
+ ..++++||+|++++|+|+.+...++..| .+++.++++++..++++ +++ ..+++++++|+|||
T Consensus 97 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~N 164 (356)
T PRK04870 97 LALACAKPGATVLAPEPGFVMYRMSAKLAG------------LEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNN 164 (356)
T ss_pred HHHHhcCCCCEEEECCCCHHHHHHHHHHcC------------CEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCC
Confidence 4 5677999999999999999999999999 58999998743232221 111 25789999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccc
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELR 305 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~ 305 (441)
|||.++|.+++++|+++| +.++|+||+|.+|..... .+ .+. ..+++++++|||| +++||+|+||+++++++
T Consensus 165 PtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~~-~~--~~~-~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~- 235 (356)
T PRK04870 165 PTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDSW-LP--RLA-RFPNLLVMRTVSK-LGLAGLRLGYLAGHPAW- 235 (356)
T ss_pred CCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcch-HH--HHh-hCCCEEEEecchh-hhhHHHhhhhhhCCHHH-
Confidence 999999999999999998 678999999998765321 11 122 2357999999999 88999999999999877
Q ss_pred ccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEEE
Q 013521 306 YSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQ 384 (441)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 384 (441)
++.+...+. ..+++.++|.++..++++ ..++++.++.++++++.+.+.|+++ |+.+. +.+|+|+|++
T Consensus 236 -------i~~~~~~~~--~~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~ 303 (356)
T PRK04870 236 -------IAELDKVRP--PYNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVR 303 (356)
T ss_pred -------HHHHHHccC--CCcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEE
Confidence 355554432 234788899888888864 3457888899999999999999987 88765 4678899999
Q ss_pred cCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 385 FPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 385 ~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
++ ++.++... ++++||.|.||+.|+...++++||+++ +.++.++++++|.+++
T Consensus 304 ~~--~~~~~~~~-l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 304 VP--DAAAVFDG-LKTRGVLVKNLSGMHPLLANCLRVTVG-TPEENAQFLAALKAAL 356 (356)
T ss_pred CC--CHHHHHHH-HHHCCEEEEECCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHhC
Confidence 97 44555555 566799999999997666789999986 5778889998888764
No 83
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-44 Score=349.64 Aligned_cols=335 Identities=22% Similarity=0.311 Sum_probs=269.0
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR- 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~- 150 (441)
.++|+|+.+++++++++.+.+++.+.+.. ....+|++..|..++|+++|+++ ++++++|++|+|+++++.+
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~l----~~~~~~v~~~~g~t~al~~~ 99 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEE----GEYCKYPPPEGFPELRELILKDL----GLDDDEALITAGATESLYLV 99 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhc----CCCCCCCCCcchHHHHHHHHHhc----CCCCCcEEEeCCHHHHHHHH
Confidence 47999999999999999999999998864 34557888889999999999996 7889999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCC-CCCccCCCCC-----CCCccEEEEcCCC
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRP-ENNFFPDLST-----TSRTDIIFFCSPN 224 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~~-----~~~~~~v~i~~p~ 224 (441)
+..++.+||.|++++|+|..+...+...| .+++.++++. ++++..+++. .++++++++++||
T Consensus 100 ~~~~~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~ 167 (380)
T PRK06225 100 MRAFLSPGDNAVTPDPGYLIIDNFASRFG------------AEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPL 167 (380)
T ss_pred HHHhcCCCCEEEEcCCCCcchHHHHHHhC------------ceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCC
Confidence 56678999999999999999888888888 5888888743 2233333221 3578999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
||||.++|.+++++|+++|++||+++|+||+|.+|..+. .+...+ .+++++++.||||.+|++|+|+||+++++++
T Consensus 168 NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l 243 (380)
T PRK06225 168 NPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH--TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVATPDL 243 (380)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC--Cchhhc--CCCCEEEEeechhhcCCccceeEEEecCHHH
Confidence 999999999999999999999999999999999876432 222233 2467899999999999999999999998877
Q ss_pred cccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCee-eCCCCceEEE
Q 013521 305 RYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKV-NGGKNAPYVW 382 (441)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~ 382 (441)
++.+..... ...+.+.++|.++.+.+.. ...++++.++.++++++.+.+.|+++ |+.+ ..+.+|+|+|
T Consensus 244 --------~~~~~~~~~-~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 313 (380)
T PRK06225 244 --------IEVVKSIVI-NDLGTNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMV 313 (380)
T ss_pred --------HHHHHHHHh-cccCCCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEE
Confidence 345544432 2345788899888888864 23567888888889899999999885 5432 2346788999
Q ss_pred EEcC--CCChHHHHHHHHHhcCeEEeCCCCcCC-CCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 383 VQFP--GSSSWDVFAEILEKTHILTIPGSGFGP-GGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 383 ~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
++++ +.+..++..++. ++||.+.||..|+. .+++++|++++.+++++++++++|++++
T Consensus 314 ~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~ 374 (380)
T PRK06225 314 IDISEAGIDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVV 374 (380)
T ss_pred EEcccccCCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHH
Confidence 9986 346677777776 55999999987753 3467999999888899999999998763
No 84
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.7e-44 Score=350.05 Aligned_cols=322 Identities=19% Similarity=0.269 Sum_probs=257.3
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR- 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~- 150 (441)
++.++|+.|++++++|+.+.+++.+.+... ..|++. +..+||++||+++ ++++++|++|+|+++++.+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~------~~Y~~~-~~~~Lr~aia~~~----~v~~e~I~it~Gs~~ai~~~ 111 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALS------GRYDLE-LEDDLRTLFAAQE----GLPADHVMAYAGSSEPLNYA 111 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHh------cCCCCc-hHHHHHHHHHHHh----CcChhhEEEcCChHHHHHHH
Confidence 568999999999999999999999877531 257554 5899999999986 8899999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC-CCCccEEEEcCCCCccc
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST-TSRTDIIFFCSPNNPTG 228 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~-~~~~~~v~i~~p~NPtG 228 (441)
+..++++||+|++++|+|+.+...++..| .+++.++.+.+..++.+ +++ .++++++++||||||||
T Consensus 112 ~~~l~~~gd~Vli~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~l~nP~NPTG 179 (370)
T PRK09105 112 VLAFTSPTAGLVTADPTYEAGWRAADAQG------------APVAKVPLRADGAHDVKAMLAADPNAGLIYICNPNNPTG 179 (370)
T ss_pred HHHHcCCCCEEEEeCCChHHHHHHHHHcC------------CeEEEecCCCCCCCCHHHHHhcCCCCCEEEEeCCCCCCC
Confidence 56778999999999999999999999998 58888888653222211 211 35789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccC
Q 013521 229 HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN 308 (441)
Q Consensus 229 ~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~ 308 (441)
.++|.+++++|++.++ ++++||+||+|.+|... + +...+.+..+++++++||||.||++|+|+||+++++++
T Consensus 180 ~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~--~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~---- 251 (370)
T PRK09105 180 TVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA--P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDL---- 251 (370)
T ss_pred cCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC--c-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHH----
Confidence 9999999999998754 58999999999877542 2 34444333578999999999999999999999998877
Q ss_pred CchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCC
Q 013521 309 GYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGS 388 (441)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 388 (441)
++.+... ..+.++.+.|.++.+++.+ ..+++..++.++++++.+.+.|+++|+.+.++ .+.|+|++++ .
T Consensus 252 ----i~~l~~~---~~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~~f~~~~~~-~ 320 (370)
T PRK09105 252 ----LAKLARF---GHNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPS-QANCFMVDVK-R 320 (370)
T ss_pred ----HHHHHhc---CCCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC-CCcEEEEeCC-C
Confidence 3455443 3344788889888888875 46788899999999999999999988887765 4556678876 3
Q ss_pred ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 389 SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 389 ~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+..++.+.++++ ||.+ |..|. ..++++||+++ ++++++++++.|+++
T Consensus 321 ~~~~l~~~L~~~-gI~v--~~~~~-~~~~~~Ris~~-~~~~~~~l~~al~~~ 367 (370)
T PRK09105 321 PAKAVADAMAKQ-GVFI--GRSWP-IWPNWVRVTVG-SEEEMAAFRSAFAKV 367 (370)
T ss_pred CHHHHHHHHHHC-CcEE--ecCCC-CCCCeEEEEcC-CHHHHHHHHHHHHHH
Confidence 567788888766 9998 44453 34689999986 467788888888765
No 85
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-44 Score=351.27 Aligned_cols=323 Identities=21% Similarity=0.291 Sum_probs=259.4
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL 151 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l 151 (441)
...++|+.|++++++|+.+.+++.+.+.. ..+|++. +..+||++||+|+ ++++++|++|+|+++++.++
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~------~~~Y~~~-~~~~Lr~~ia~~~----~~~~~~I~it~G~~~~l~~~ 100 (369)
T PRK08153 32 PFRARIGANESGFGPSPSVIAAMREAAAE------IWKYGDP-ENHDLRHALAAHH----GVAPENIMVGEGIDGLLGLI 100 (369)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHHH------hhcCCCC-ccHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHH
Confidence 34679999999999999999999887642 2368655 5899999999997 78999999999999999985
Q ss_pred -HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CC---CCCCccEEEEcCCCCc
Q 013521 152 -QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LS---TTSRTDIIFFCSPNNP 226 (441)
Q Consensus 152 -~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~---~~~~~~~v~i~~p~NP 226 (441)
..++++||.|++++|+|+.+...+...| .+++.+|.+.+ ..+.+ +. ...+++++++||||||
T Consensus 101 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g------------~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NP 167 (369)
T PRK08153 101 VRLYVEPGDPVVTSLGAYPTFNYHVAGFG------------GRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNP 167 (369)
T ss_pred HHHhcCCCCEEEECCCcchHHHHHHHHcC------------CeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCC
Confidence 5668999999999999999998888888 58888887654 22211 11 1357899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccc
Q 013521 227 TGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRY 306 (441)
Q Consensus 227 tG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~ 306 (441)
||.++|.+++++|+++|+ ++++||+||+|.++.+++...++. ...+++++++||||.+|+||+|+||+++++++
T Consensus 168 tG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~---~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~-- 241 (369)
T PRK08153 168 MGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGAAPPID---TDDPNVIRMRTFSKAYGLAGARVGYAIGAPGT-- 241 (369)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcccchhhh---hcCCCEEEEecchHhccCcchheeeeecCHHH--
Confidence 999999999999999887 489999999999988764333332 22467999999999999999999999999877
Q ss_pred cCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcC
Q 013521 307 SNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFP 386 (441)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 386 (441)
++.+..... ..+++.++|.++.+++.+ .+++++.++.++++++.+.+.|++.|+.+. +.+++|+|++++
T Consensus 242 ------~~~l~~~~~--~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f~~~~~~ 310 (369)
T PRK08153 242 ------IKAFDKVRN--HFGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPL-PSATNFVAIDCG 310 (369)
T ss_pred ------HHHHHHhhc--CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcEEEEECC
Confidence 455655443 245899999999999974 356788899999999999999998888755 478999999986
Q ss_pred C--CChHHHHHHHHHhcCeEEe-CCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 387 G--SSSWDVFAEILEKTHILTI-PGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 387 ~--~~~~~~~~~ll~~~gi~v~-pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
. ....++.+++++ +||.++ |+.. .+++++||++. ++++++.+++.|+++
T Consensus 311 ~~~~~a~~l~~~l~~-~Gi~v~~p~~~---~~~~~iRis~~-~~~~~~~~~~al~~~ 362 (369)
T PRK08153 311 RDGAFARAVLDGLIA-RDIFVRMPGVA---PLDRCIRVSCG-PDEELDLFAEALPEA 362 (369)
T ss_pred CCcccHHHHHHHHHH-CCeEEeeCCCC---CCCCeEEEecC-CHHHHHHHHHHHHHH
Confidence 2 234566666665 599995 6542 23579999986 678899999988775
No 86
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-44 Score=353.57 Aligned_cols=341 Identities=18% Similarity=0.204 Sum_probs=258.5
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh-hCCCC---CCcEEEcCCcHHHHH
Q 013521 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK-DMGIE---GDEIFISDGAQSDIS 149 (441)
Q Consensus 74 ~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~-~~~~~---~~~I~~t~G~~~al~ 149 (441)
-++.++|....+..+.+.+++.+.+.+... +..++|++..|.++||+++++++.+ ..... .++|++|+|+++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~ 83 (388)
T PRK08637 5 KYNATIGMATEKGGPMYLSSLQDLLNDLTP-DEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLS 83 (388)
T ss_pred ceecceeeEecCCCcchHHHHHHHHHhhcc-ccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHH
Confidence 467777765433345777777777766432 5677999999999999999999865 32333 368999999999999
Q ss_pred H-HHHhcCCCCEEEEeCCCchhhHhHHH-HhccccccccccCccceeEEeecC-CCCCccCC-CCC------CCCccEEE
Q 013521 150 R-LQMLLGSNVTVAVQDPSFPAYIDTSV-IVGQAGKFLKETGKYRNIVYMNCR-PENNFFPD-LST------TSRTDIIF 219 (441)
Q Consensus 150 ~-l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~v~~v~~~-~~~~~~~~-~~~------~~~~~~v~ 219 (441)
+ +..+++|||.|++++|+|+.|...+. ..| .+++.+++. ++++++.+ ++. .+..++++
T Consensus 84 ~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g------------~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~ 151 (388)
T PRK08637 84 LVADLFVDQGDTVLLPDHNWGNYKLTFNTRRG------------AEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVI 151 (388)
T ss_pred HHHHHhcCCCCEEEEcCCCCccHHHHHHHhcC------------CEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEE
Confidence 8 56677999999999999999988754 567 588888884 33344332 211 13445566
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHH-----cCcEEEEcccccccccCCCC-Ccc-cccCCCccee--EEEecCCcccCC
Q 013521 220 FCSPNNPTGHAATWQQLKKLVEFAKA-----NGSIIVYDSAYAAYITDPSP-RSI-YEIPGAREVA--IEISSFSKFAGF 290 (441)
Q Consensus 220 i~~p~NPtG~~~~~~~~~~i~~~a~~-----~~~~ii~De~~~~~~~~~~~-~~~-~~~~~~~~~~--i~i~S~SK~~~~ 290 (441)
++|||||||.++|.+++++|+++|++ |+++||+||+|.++.+++.+ .++ ..+.+..+++ ++++||||.+++
T Consensus 152 ~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~ 231 (388)
T PRK08637 152 LNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFV 231 (388)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCC
Confidence 77999999999999999999998875 89999999999999887542 233 2232234564 556799999999
Q ss_pred ccceeEEEEeec------cccccCCchhHHHHHHH----HhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHH
Q 013521 291 TGVRLGWTVVPE------ELRYSNGYPVIKDFNRI----VCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAK 359 (441)
Q Consensus 291 ~G~r~G~l~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~ 359 (441)
||+|+||++++. .+ .+.+... ......++|.++|.++.+++.+..+ .++++.+..++++++
T Consensus 232 pGlRlG~~~~~~~~~~~~~l--------~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~ 303 (388)
T PRK08637 232 WGFRVGFITFGTKAGSSQTV--------KEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYE 303 (388)
T ss_pred cccceEEEEEccccCCcHHH--------HHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999763 33 3344321 1223345789999999999986555 567888889999999
Q ss_pred HHHHHHHhC----CCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-CHHHHHHHH
Q 013521 360 IIVDAFQSL----GLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG-HREYISEAC 434 (441)
Q Consensus 360 ~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~~~~~~l 434 (441)
.+.+.|++. ++.+.++.+|+|+|+++++.++.++++.+++++||.+.+. +++++||+++. +.+++++++
T Consensus 304 ~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~~~~~i~~~~ 377 (388)
T PRK08637 304 KTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIAL------NETDLRIAFSCVEEEDIPELF 377 (388)
T ss_pred HHHHHHHhhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEec------cCCceEEEeecCCHHHHHHHH
Confidence 999999765 5777777899999999975456778888887789988742 35689999965 789999999
Q ss_pred HHHHhhC
Q 013521 435 RRLKNFL 441 (441)
Q Consensus 435 ~~l~~~l 441 (441)
++|++++
T Consensus 378 ~~l~~~~ 384 (388)
T PRK08637 378 DSIYKAI 384 (388)
T ss_pred HHHHHHH
Confidence 9998864
No 87
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-44 Score=342.82 Aligned_cols=317 Identities=17% Similarity=0.286 Sum_probs=249.2
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
+.++++|+.|++++++|+.+.+++.+++.. .....|++ .|..+||+++|+|+.+. ++++++|++|+|+++++.+
T Consensus 18 ~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~----~~~~~Y~~-~~~~~Lr~aia~~~~~~-~~~~~~i~it~Ga~~~i~~ 91 (335)
T PRK14808 18 KRDRTYLALNENPFPFPEDLVDEVFRRLNS----DTLRIYYD-SPDEELIEKILSYLDTD-FLSKNNVSVGNGADEIIYV 91 (335)
T ss_pred CCceeEecCCCCCCCCCHHHHHHHHHHhhh----hhhhcCCC-CChHHHHHHHHHHhCCC-CCCcceEEEcCCHHHHHHH
Confidence 357899999999999999999999987753 23344744 48999999999998653 2789999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccC
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHA 230 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~ 230 (441)
++..+ |.|++++|+|+.+...++..| .+++.++++.+.. .+.....++++++++|||||||.+
T Consensus 92 ~~~~~---d~v~v~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~--~~~~~~~~~~~i~i~nP~NPTG~~ 154 (335)
T PRK14808 92 MMLMF---DRSVFFPPTYSCYRIFAKAVG------------AKFLEVPLTKDLR--IPEVNVGEGDVVFIPNPNNPTGHV 154 (335)
T ss_pred HHHHh---CcEEECCCCHHHHHHHHHHcC------------CeEEEecCCCcCC--CChhHccCCCEEEEeCCCCCCCCC
Confidence 65555 679999999999999999999 5889999875432 221123457899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCc
Q 013521 231 ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY 310 (441)
Q Consensus 231 ~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~ 310 (441)
+|.+++++|+ +++++||+||+|.+|... ...++. . ..+++++++||||++|++|+|+||+++++++
T Consensus 155 ~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~-~~~~~~--~-~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~------ 220 (335)
T PRK14808 155 FEREEIERIL----KTGAFVALDEAYYEFHGE-SYVDLL--K-KYENLAVIRTFSKAFSLAAQRIGYVVSSEKF------ 220 (335)
T ss_pred cCHHHHHHHH----hcCCEEEEECchhhhcCC-chHHHH--H-hCCCEEEEEechhhccCcccceEEEEeCHHH------
Confidence 9988888886 479999999999997522 122221 1 2358999999999999999999999999887
Q ss_pred hhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCCh
Q 013521 311 PVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSS 390 (441)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 390 (441)
++.+...+. ..+++.++|.++.+++++ .++..+.++.++++++.+.+.|++.|+.+.++ .|+|+|+++++.+.
T Consensus 221 --~~~l~~~~~--~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~g~f~~~~l~~~~~ 293 (335)
T PRK14808 221 --IDAYNRVRL--PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS-RGNFVFIFMEKEEK 293 (335)
T ss_pred --HHHHHHhcC--CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCeEEEEeCCCccH
Confidence 455655442 345788999998888864 34567777888888999999999989887764 78899999985455
Q ss_pred HHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 391 WDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 391 ~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
.++.+.+. ++||.|++ | .+++||+++ ++++.+++++.|+++
T Consensus 294 ~~~~~~l~-~~Gi~V~~---~----~~~~Risi~-~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 294 ERLLEHLR-AKNIAVRS---F----REGVRITIG-KREENDMILKELEVF 334 (335)
T ss_pred HHHHHHHH-HCCeEEEE---C----CCCeEEecC-CHHHHHHHHHHHHhh
Confidence 56655555 56999985 4 258999974 567888888888764
No 88
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-44 Score=349.09 Aligned_cols=320 Identities=22% Similarity=0.318 Sum_probs=253.3
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
+.++|+|+.|++++++|+.+.+++.+. .....|+ +.+..+||+++|+|+ ++++++|++|+|+++++.+
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~-------~~~~~Yp-~~~~~~lr~~ia~~~----~~~~~~I~~t~Ga~~~i~~ 118 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNM-------KFPYVYP-DPESRRLRAALAEDS----GLESENILVGCGADELIDL 118 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhh-------HhhccCC-CCCHHHHHHHHHHHh----CcChhhEEEcCCHHHHHHH
Confidence 357999999999998888888887542 1223574 457899999999997 7899999999999999998
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC------CCCccEEEEcCC
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST------TSRTDIIFFCSP 223 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~------~~~~~~v~i~~p 223 (441)
+..++++||+|++++|+|+.|...++..| .+++.++.+.+ +..+++. .+++++|++|||
T Consensus 119 ~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g------------~~~~~v~~~~~--~~~d~~~l~~~~~~~~~~~v~l~~P 184 (380)
T PLN03026 119 LMRCVLDPGDKIIDCPPTFGMYVFDAAVNG------------AEVIKVPRTPD--FSLDVPRIVEAVETHKPKLLFLTSP 184 (380)
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHHHcC------------CEEEEeecCCC--CCcCHHHHHHHHhccCCcEEEEeCC
Confidence 46678999999999999999988888888 58888887543 3333221 368999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
|||||.+++.+++++|++.+ ++||+||+|.+|.+++...+ .++ ..+++|+++||||.||++|+|+||++++++
T Consensus 185 ~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~~~~~--~~~-~~~~viv~~SfSK~~glaGlRiGy~~~~~~ 257 (380)
T PLN03026 185 NNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQESRMK--WVK-KYDNLIVLRTFSKRAGLAGLRVGYGAFPLS 257 (380)
T ss_pred CCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCcchHH--HHH-hCCCEEEEecchHhhcCccccceeeecCHH
Confidence 99999999998888888753 89999999999876532222 122 246899999999999999999999999988
Q ss_pred ccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCceEEE
Q 013521 304 LRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG-LKVNGGKNAPYVW 382 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~ 382 (441)
+ ++.+...+. ..+++.++|.++.++|.+ ..++++.++.++++++.+.+.|++++ +.+ .+++++|+|
T Consensus 258 ~--------i~~l~~~~~--~~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~ 324 (380)
T PLN03026 258 I--------IEYLWRAKQ--PYNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFIL 324 (380)
T ss_pred H--------HHHHHHhcC--CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEE
Confidence 7 355554443 245788999999999975 35678899999999999999999885 444 457899999
Q ss_pred EEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 383 VQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 383 ~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
++++ +.++.++...++ ++||.+++++.+ ..++++||+++ ++++.+.+++.|+++
T Consensus 325 ~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~--~~~~~lRis~~-~~~~~~~l~~al~~~ 379 (380)
T PLN03026 325 CRVTSGRDAKKLKEDLA-KMGVMVRHYNSK--ELKGYIRVSVG-KPEHTDALMEALKQL 379 (380)
T ss_pred EECCCCCCHHHHHHHHH-HCCeEEEECCCC--CCCCEEEEecC-CHHHHHHHHHHHHHh
Confidence 9997 345677777777 569999998653 34679999986 456667777777654
No 89
>PLN02368 alanine transaminase
Probab=100.00 E-value=6.8e-45 Score=354.44 Aligned_cols=292 Identities=20% Similarity=0.294 Sum_probs=232.2
Q ss_pred CCCeEEeCCCCCC--------C----------------------CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHH
Q 013521 71 DARLIRLGIGDTT--------Q----------------------PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALR 120 (441)
Q Consensus 71 ~~~~i~l~~g~~~--------~----------------------~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr 120 (441)
+.++|+|++|+|+ + .+++.+.+++ +.+.. ......+|++..|..+||
T Consensus 37 g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~-~~l~~--~~~~~~~Y~~~~G~~~LR 113 (407)
T PLN02368 37 GKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK-HYLSL--TSGGLGAYSDSRGLPGVR 113 (407)
T ss_pred hhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH-HHHhc--CCCCCCCCCCCCCCHHHH
Confidence 4579999999996 2 1344444444 33321 113466899999999999
Q ss_pred HHHHHHHhh--hCCCCCCcEEEcCCcHHHHHH-HHHhc-CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEE
Q 013521 121 TAIADKFYK--DMGIEGDEIFISDGAQSDISR-LQMLL-GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVY 196 (441)
Q Consensus 121 ~~ia~~l~~--~~~~~~~~I~~t~G~~~al~~-l~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 196 (441)
++||+|+.+ ++.+++++|++|+|+++++.+ +..++ ++||.|++++|+|+.|...+...| .+++.
T Consensus 114 ~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g------------~~~v~ 181 (407)
T PLN02368 114 KEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLG------------GTLVP 181 (407)
T ss_pred HHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcC------------CEEEE
Confidence 999999975 555789999999999999987 56676 799999999999999999999999 58999
Q ss_pred eecCCCCCccCCCCC-----C------CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-
Q 013521 197 MNCRPENNFFPDLST-----T------SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS- 264 (441)
Q Consensus 197 v~~~~~~~~~~~~~~-----~------~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~- 264 (441)
++++.+++|..+++. . .++|++++||||||||.++|.+++++|+++|++||++||+||+|.++.+++.
T Consensus 182 v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~ 261 (407)
T PLN02368 182 YYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDER 261 (407)
T ss_pred EecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 998876666665432 1 1689999999999999999999999999999999999999999999988652
Q ss_pred -CCccccc----CC---CcceeEEEecCCccc-CCccceeEEEEe---eccccccCCchhHHHHHHHHhhhcCCCcHHHH
Q 013521 265 -PRSIYEI----PG---AREVAIEISSFSKFA-GFTGVRLGWTVV---PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQ 332 (441)
Q Consensus 265 -~~~~~~~----~~---~~~~~i~i~S~SK~~-~~~G~r~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
+.++..+ +. ..+++|+++||||.| |+||||+||+++ ++++ ++.+...... ..+++.++|
T Consensus 262 ~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~l--------i~~~~~~~~~-~~~~~~~~Q 332 (407)
T PLN02368 262 PFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKT--------VEEIYKVASI-ALSPNVSGQ 332 (407)
T ss_pred CcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHH--------HHHHHHHhcc-cCCCCcHHH
Confidence 3454432 11 134899999999998 899999999995 6666 4555555333 345888999
Q ss_pred HHHHHhcCCCc--------H-HHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEEEcC
Q 013521 333 AGGLACLSPDG--------F-QALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQFP 386 (441)
Q Consensus 333 ~a~~~~l~~~~--------~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 386 (441)
.++.+++++.. + ++.+++++.|++|++.+.+.|+++ |+.+..|++|+|+|++++
T Consensus 333 ~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 333 IFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 99999997431 1 334567899999999999999997 999888899999998775
No 90
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-44 Score=347.42 Aligned_cols=326 Identities=21% Similarity=0.283 Sum_probs=254.7
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al~~ 150 (441)
..++|+.|+|++++|+.+.+++.+.+.... .....|+ +.|..+||+++|+|+.+ +.++++++|++|+|+++++.+
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~--~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAA--AGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhh--hhhccCC-CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 469999999999999999999999876422 2456784 56899999999999976 567899999999999999998
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC------CCCccEEEEcCC
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST------TSRTDIIFFCSP 223 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~------~~~~~~v~i~~p 223 (441)
+..++++||.|+++.|+|+.+...+...| .+++.++.++ ++..+++. ..++++++++||
T Consensus 104 ~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g------------~~~~~~~~~~--~~~~d~~~l~~~~~~~~~~~i~l~~p 169 (368)
T PRK03317 104 LLQAFGGPGRTALGFVPSYSMHPIIARGTH------------TEWVEGPRAA--DFTLDVDAAVAAIAEHRPDVVFLTSP 169 (368)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHHhcC------------CeeEEcccCC--CCCCCHHHHHHHHhccCCCEEEEeCC
Confidence 56678999999999999999999888877 4777776643 33333321 247899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
|||||.+++.+++++|+++| +++||+||+|.+|.+++.+ +...+.+..+++++++||||.+|++|+|+||++++++
T Consensus 170 ~NPtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~ 245 (368)
T PRK03317 170 NNPTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPA 245 (368)
T ss_pred CCCCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHH
Confidence 99999999988888888876 6999999999998765433 2323212234789999999999999999999999888
Q ss_pred ccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEE
Q 013521 304 LRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWV 383 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 383 (441)
+ ++.+.... ...+++.+.|.++.+++++ .+.+.+.++.++++++.+.+.|+++|+.+.++.+++++|.
T Consensus 246 ~--------~~~l~~~~--~~~~~s~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 313 (368)
T PRK03317 246 V--------VDALRLVR--LPYHLSAVTQAAARAALRH--ADELLASVAALRAERDRVVAWLRELGLRVAPSDANFVLFG 313 (368)
T ss_pred H--------HHHHHhcC--CCCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEEEEe
Confidence 7 35555433 2345789999999999974 2334455677888999999999988988877667777776
Q ss_pred EcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 384 QFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 384 ~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+++ +..++.+.++ ++||.+.+.. .++++||++. +.++++++++.|+++
T Consensus 314 ~~~--~~~~~~~~l~-~~Gv~v~~~~-----~~~~iRi~~~-~~~~~~~~~~~l~~~ 361 (368)
T PRK03317 314 RFA--DRHAVWQGLL-DRGVLIRDVG-----IPGWLRVTIG-TPEENDAFLAALAEV 361 (368)
T ss_pred ccC--CHHHHHHHHH-HCCEEEEeCC-----CCCeEEEecC-CHHHHHHHHHHHHHH
Confidence 664 4556666655 4699998742 2579999985 567788888888765
No 91
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-43 Score=342.64 Aligned_cols=318 Identities=18% Similarity=0.269 Sum_probs=246.5
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-H
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-L 151 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l 151 (441)
..++++.+++++++++.. . .....|++. +..+||+++|+++ ++++++|++|+|+++++.+ +
T Consensus 32 ~~~~~~~ne~~~~~~~~~-------~------~~~~~Y~~~-~~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~ 93 (364)
T PRK04781 32 GDVWLNANESAWANPADP-------D------ASTRRYPDP-QPPGLRSALAALY----GCAPEQLLIGRGSDEAIDLLV 93 (364)
T ss_pred CCEEeeCCCCCCCCChhh-------c------chhccCCCC-CHHHHHHHHHHHh----CcChHHEEEeCCHHHHHHHHH
Confidence 368899998877666531 0 233468544 5799999999997 7899999999999999998 5
Q ss_pred HHhcCCC-CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCC-CCCccCCCCC------CCCccEEEEcCC
Q 013521 152 QMLLGSN-VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRP-ENNFFPDLST------TSRTDIIFFCSP 223 (441)
Q Consensus 152 ~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~~------~~~~~~v~i~~p 223 (441)
..++.+| |.|++++|+|+.+...++..| .+++.++++. ++++..+++. .++++++++|||
T Consensus 94 ~~~~~~g~~~vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p 161 (364)
T PRK04781 94 RALCVPGRDAVLVTPPVFGMYAVCARLQN------------APLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSP 161 (364)
T ss_pred HHhcCCCCCeEEEcCCChHHHHHHHHHcC------------CEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCC
Confidence 6677888 799999999999988888888 5899999853 3355444321 368899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
|||||.+++.+++++++++|+ ++++||+||+|.+|.+...+.++ . +..+++|+++||||+||+||+|+||+++|++
T Consensus 162 ~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~~~~~~--~-~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~ 237 (364)
T PRK04781 162 SNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVPSAVGL--L-ARYDNLAVLRTLSKAHALAAARIGSLIANAE 237 (364)
T ss_pred CCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCcchHHH--H-hhCCCEEEEecChhhcccccceeeeeeCCHH
Confidence 999999999999999999985 47899999999998764222122 2 2346899999999999999999999999988
Q ss_pred ccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEE
Q 013521 304 LRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVW 382 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 382 (441)
+ ++.+...+. ..+.+.++|.++.+++.+..+.+..+.++.++++++.+.+.|+++ ++....+++|+|+|
T Consensus 238 l--------~~~l~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~ 307 (364)
T PRK04781 238 L--------IAVLRRCQA--PYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLL 307 (364)
T ss_pred H--------HHHHHhccC--CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEE
Confidence 7 455655443 345788899999999986555555666678899999999999988 66433457899999
Q ss_pred EEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHh
Q 013521 383 VQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKN 439 (441)
Q Consensus 383 ~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~ 439 (441)
++++ +..++.+.+ +++||.|+||..|.. .++|+||+++ .+++.+++++.|++
T Consensus 308 ~~~~--~~~~~~~~l-~~~gI~v~~~~~~~~-~~~~~Ris~~-~~~~~~~l~~al~~ 359 (364)
T PRK04781 308 VRFD--DAEAAFQAL-LAAGVVVRDQRAAPR-LSDALRITLG-TPEQNDRVLAALQR 359 (364)
T ss_pred EEcC--CHHHHHHHH-HHCCeEEeeCCCCCC-CCCeEEEeCC-CHHHHHHHHHHHHH
Confidence 9997 455665655 466999999987753 4679999985 45566666666654
No 92
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.4e-43 Score=343.33 Aligned_cols=329 Identities=22% Similarity=0.355 Sum_probs=261.9
Q ss_pred CCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH
Q 013521 70 PDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~ 149 (441)
++.++++|+.|.+++.+++.+.+++.+.+.. ..+|++. +..++|+++|+++ ++++++|++|+|+++++.
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~------~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~ 98 (367)
T PRK02731 30 GIADIIKLASNENPLGPSPKAIEAIRAAADE------LHRYPDG-SGFELKAALAEKF----GVDPERIILGNGSDEILE 98 (367)
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHh------hcCCCCC-cHHHHHHHHHHHh----CcCHHHEEEcCCHHHHHH
Confidence 3457999999998888888899999987643 3468654 4579999999997 788999999999999998
Q ss_pred H-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCC
Q 013521 150 R-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNN 225 (441)
Q Consensus 150 ~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~N 225 (441)
+ +..++++||.|++++|+|+.+...+...| .+++.++.+. ..++.+ ++. .+++++|+++||||
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~n 165 (367)
T PRK02731 99 LLARAYLGPGDEVIYSEHGFAVYPIAAQAVG------------AKPVEVPAKD-YGHDLDAMLAAVTPRTRLVFIANPNN 165 (367)
T ss_pred HHHHHhcCCCCEEEEecCCHHHHHHHHHHcC------------CeEEEecccC-CCCCHHHHHHHhCCCCcEEEEeCCCC
Confidence 7 46678999999999999999888888888 5888888743 222211 211 35789999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
|||.+++.+++++|++.|+ ++++||+||+|.++.+++. ..++..+ +..+++++++||||.+|++|+|+||+++++++
T Consensus 166 ptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~ 243 (367)
T PRK02731 166 PTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELV-AKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEI 243 (367)
T ss_pred CCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHH-hhcCCEEEEeeehHhhcCcccceeeeeCCHHH
Confidence 9999999999999998875 6999999999998877543 2233222 23467899999999999999999999999877
Q ss_pred cccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEE
Q 013521 305 RYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQ 384 (441)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 384 (441)
.+.+..... ....+.++|.++.+++++ ..++++.++.++++++.+.+.|++.|+.+.+ ++|+|+|++
T Consensus 244 --------~~~l~~~~~--~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g~~~~i~ 310 (367)
T PRK02731 244 --------IDALNRVRQ--PFNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAELGLEYIP-SVGNFILVD 310 (367)
T ss_pred --------HHHHHHccC--CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC-CCceEEEEE
Confidence 355554432 234678999999999974 4567888999999999999999998887764 578999999
Q ss_pred cC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 385 FP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 385 ~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
++ ..++.++.+.|.+ +||.+.|+..|+ .+++||+++. +.++++.+++.|++++
T Consensus 311 ~~~~~~~~~~~~~L~~-~gI~v~~~~~~~--~~~~iRis~~-~~~e~~~l~~aL~~~~ 364 (367)
T PRK02731 311 FDDGKDAAEAYQALLK-RGVIVRPVAGYG--LPNALRITIG-TEEENRRFLAALKEFL 364 (367)
T ss_pred CCCCCCHHHHHHHHHH-CCEEEEeCCCCC--CCCeEEEecC-CHHHHHHHHHHHHHHH
Confidence 96 3456777777665 599999998875 3579999985 6788899999988753
No 93
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.1e-43 Score=334.65 Aligned_cols=306 Identities=17% Similarity=0.233 Sum_probs=240.8
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQSDISR 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~~al~~ 150 (441)
.++++|+.+++++++|+....+ ..+ ..|+. .. .+||+++|+++ +++ +++|++|+|+++++.+
T Consensus 24 ~~~i~ls~Nenp~~~~~~~~~~--~~~---------~~Yp~-~~-~~L~~~ia~~~----~~~~~~~I~i~~Gs~e~i~~ 86 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPVPA--DAW---------RRLPE-DD-DGLAACAARYY----GAPDAAHVLPVAGSQAAIRA 86 (339)
T ss_pred hhhceeccCCCCCCCCCCCCCH--HHH---------HhCCC-ch-HHHHHHHHHHh----CCCCcccEEECcCHHHHHHH
Confidence 3579999999887665222111 112 24753 34 89999999996 775 5899999999999998
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccC
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHA 230 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~ 230 (441)
+..++++|| |++++|+|+.|...++..| .+++.++.+.+ . +. ..++++++||||||||.+
T Consensus 87 l~~~~~~g~-v~v~~P~y~~y~~~~~~~g------------~~~~~v~~~~~-~----~~--~~~~~v~l~nPnNPTG~~ 146 (339)
T PRK06959 87 LPALLPRGR-VGIAPLAYSEYAPAFARHG------------HRVVPLDEAAD-T----LP--AALTHLIVVNPNNPTAER 146 (339)
T ss_pred HHHhcCCCe-EEEcCCCcHHHHHHHHHCC------------CEEEeecccch-h----cc--ccCCEEEEeCCCCCCCCC
Confidence 767788887 8889999999999999998 57888877541 1 11 245789999999999999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCc
Q 013521 231 ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY 310 (441)
Q Consensus 231 ~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~ 310 (441)
+|.+++++|++.|.+++.++|+||+|.+|... .++..+.+ .+++|+++||||.||+||+|+||+++++++
T Consensus 147 ~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~---~s~~~~~~-~~~vi~l~SfSK~~gl~GlRiGy~v~~~~l------ 216 (339)
T PRK06959 147 LPAARLLRWHAQLAARGGTLIVDEAFADTLPA---ASLAAHTD-RPGLVVLRSVGKFFGLAGVRAGFVLAAPAL------ 216 (339)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCccCCCc---ccchhccC-CCCEEEEecChhhcCCcchheEEEecCHHH------
Confidence 99999999999999999999999999998643 33444432 356899999999999999999999999887
Q ss_pred hhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCCh
Q 013521 311 PVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSS 390 (441)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 390 (441)
++.+..... .++++.++|.++.++|++. .+.++.++.++++++.+.+.|+++|+.+. .+++|+|++++ +.
T Consensus 217 --i~~l~~~~~--~~~vs~~~q~a~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~f~~~~~~--~~ 286 (339)
T PRK06959 217 --LAALRDALG--AWTVSGPARHAVRAAFADA--AWQAAMRERLAADGARLAALLRAHGFAVH--ATPLFSWTDDP--RA 286 (339)
T ss_pred --HHHHHHhcC--CCCCcHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHHCCCCcc--CcceEEEEeCC--CH
Confidence 466665543 3447889999999999753 45688899999999999999999887765 36799999986 45
Q ss_pred HHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 391 WDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 391 ~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
.++...+++ +||.|+. |+ ..+++||++..++++.+++++.|+++
T Consensus 287 ~~l~~~l~~-~GI~vr~---~~--~~~~lRisi~~~~~e~~~l~~al~~~ 330 (339)
T PRK06959 287 AALHAALAR-RGIWTRY---FA--PPPSVRFGLPADEAEWQRLEDALAEC 330 (339)
T ss_pred HHHHHHHHh-CCeEEEE---CC--CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence 567776665 5999974 42 24699999866777888888877764
No 94
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-42 Score=334.50 Aligned_cols=321 Identities=21% Similarity=0.335 Sum_probs=247.4
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-H
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-L 151 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l 151 (441)
..++|+.|++++++|+.+++++.+.+.. ....+|++ .+..++|+++|+|+ ++++++|++|+|+++++.+ +
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~----~~~~~y~~-~~~~~lr~~ia~~~----~~~~~~i~it~G~~~~l~~~~ 93 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKS----SQVNIYPD-PTAEKLREELARYC----SVVPTNIFVGNGSDEIIHLIM 93 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhc----CcccCCCC-ccHHHHHHHHHHHh----CCCcccEEEecCHHHHHHHHH
Confidence 4689999999999999999999887753 34567864 45799999999996 7899999999999999997 5
Q ss_pred HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC---CCCccEEEEcCCCCcc
Q 013521 152 QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST---TSRTDIIFFCSPNNPT 227 (441)
Q Consensus 152 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~---~~~~~~v~i~~p~NPt 227 (441)
..++++||+|++++|+|+.+...++..| .+++.++.+++.+++++ +++ ..++++++++||||||
T Consensus 94 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPt 161 (351)
T PRK14807 94 LAFINKGDVVIYPHPSFAMYSVYSKIAG------------AVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPT 161 (351)
T ss_pred HHhcCCCCEEEEeCCChHHHHHHHHHcC------------CeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCC
Confidence 6678999999999999999988888888 58888888653333221 111 2488999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccccc
Q 013521 228 GHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYS 307 (441)
Q Consensus 228 G~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~ 307 (441)
|.+++.+++++++ ++++.++|+||+|.++. +....++ ++ ..+++|+++||||.+|+||+|+||+++++++
T Consensus 162 G~~~~~~~l~~l~---~~~~~~~ivDe~y~~~~-~~~~~~~--~~-~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~--- 231 (351)
T PRK14807 162 GSVIEREDIIKII---EKSRGIVVVDEAYFEFY-GNTIVDV--IN-EFENLIVLRTLSKAFGLAGLRVGYAVANENI--- 231 (351)
T ss_pred CCCCCHHHHHHHH---HhCCCEEEEeCcchhhc-ccchHHH--hh-hCCCEEEEecchHhcccchhceeeeecCHHH---
Confidence 9999976666665 46678899999999874 3222222 21 2467999999999999999999999998887
Q ss_pred CCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEEEcC
Q 013521 308 NGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQFP 386 (441)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 386 (441)
++.+...+. ...++.+.|.++.+++++ .++++..+.++++++.+.+.|++. |+.+.+ ++|+|+|++++
T Consensus 232 -----~~~~~~~~~--~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~-~~~~~~~i~~~ 300 (351)
T PRK14807 232 -----LKYLNLVKS--PYNINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYP-SKTNFILVKFK 300 (351)
T ss_pred -----HHHHHHccC--CCCcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECc-CCccEEEEEcC
Confidence 455554433 244788999999999974 245667778888999999999876 887754 57889999997
Q ss_pred CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 387 GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 387 ~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
++.++.+.++ ++||.|.++..+. ..++++||+++ ++++.+.+++.|+++
T Consensus 301 --~~~~~~~~l~-~~gV~v~~~~~~~-~~~~~iRis~~-~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 301 --DADYVYQGLL-ERGILVRDFSKVE-GLEGALRITVS-SCEANDYLINGLKEL 349 (351)
T ss_pred --CHHHHHHHHH-HCCEEEEECCCCC-CCCCeEEEEcC-CHHHHHHHHHHHHHh
Confidence 3555656655 4599998865322 34679999985 456667777777665
No 95
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-43 Score=339.99 Aligned_cols=317 Identities=20% Similarity=0.276 Sum_probs=248.1
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL 151 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l 151 (441)
.+.++|+.|++++++++.+ .. .....|++ .+..+||+++|+++ ++++++|++|+|+++++.++
T Consensus 31 ~~~~~l~~ne~~~~~~~~~------~~------~~~~~Yp~-~~~~~Lr~aia~~~----~~~~~~I~it~Gs~~~i~~~ 93 (354)
T PRK04635 31 RGDIWINANESPFNNEYKL------DL------ARLNRYPE-CQPPELINAYSAYA----GVAPEQILTSRGADEAIELL 93 (354)
T ss_pred CCcEEeeCCCCCCCCChhh------hh------HHhccCCC-CCHHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHH
Confidence 3569999999998877542 11 22346854 46899999999986 89999999999999999985
Q ss_pred -HHhcCCC-CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCCCCCccEEEEcCCCCccc
Q 013521 152 -QMLLGSN-VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LSTTSRTDIIFFCSPNNPTG 228 (441)
Q Consensus 152 -~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~~~~~~~v~i~~p~NPtG 228 (441)
..++++| |+|+++.|+|+.|...++..| .+++.+|++.+..++.+ ++..+++++|++||||||||
T Consensus 94 ~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g------------~~v~~v~~~~~~~~~~~~l~~~~~~~li~i~nP~NPTG 161 (354)
T PRK04635 94 IRAFCEPGQDSIACFGPTYGMYAISAETFN------------VGVKALPLTADYQLPLDYIEQLDGAKLVFICNPNNPTG 161 (354)
T ss_pred HHHhcCCCCCeEEEcCCChHHHHHHHHHcC------------CEEEEEecCCCCCCCHHHHHhccCCCEEEEeCCCCCCC
Confidence 5677888 899999999999988888888 58999998643232222 12236899999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccC
Q 013521 229 HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN 308 (441)
Q Consensus 229 ~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~ 308 (441)
.++|.+++++|+++|+ +++||+||+|.+|.... +..++....+++++++||||.+|+||+|+||+++++++
T Consensus 162 ~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~---- 232 (354)
T PRK04635 162 TVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPEY---SVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEEL---- 232 (354)
T ss_pred ccCCHHHHHHHHHhCC--CcEEEEeCchHhhccCc---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHH----
Confidence 9999999999998876 49999999999886432 23232223467899999999999999999999999887
Q ss_pred CchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCceEEEEEcCC
Q 013521 309 GYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG-LKVNGGKNAPYVWVQFPG 387 (441)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~ 387 (441)
++.+..... ..+.+.+.|.++.+++.+.+.+++++.++.++++++.+.+.|++++ +.+.++ +|+|+|++++
T Consensus 233 ----~~~l~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~- 304 (354)
T PRK04635 233 ----IEILMRVIA--PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG-NGNYVLAKFD- 304 (354)
T ss_pred ----HHHHHhhcC--CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-CCcEEEEECC-
Confidence 345544322 3446778888889999866666778888999999999999999884 777654 6889999987
Q ss_pred CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHh
Q 013521 388 SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKN 439 (441)
Q Consensus 388 ~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~ 439 (441)
+..++.+ +++++||.++++..+ ..++++|||+ +++++++.++++|++
T Consensus 305 -~~~~~~~-~l~~~gv~v~~~~~~--~~~~~lRis~-~~~e~~~~l~~al~~ 351 (354)
T PRK04635 305 -DVDAVFK-ALWDAGIVARAYKDP--RLANCIRFSF-SNRAETDKLIGLIRN 351 (354)
T ss_pred -CHHHHHH-HHHHCCEEEEECCCC--CCCCeEEEEe-CCHHHHHHHHHHHHH
Confidence 3455554 455679999875432 2467999997 468899999999876
No 96
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-43 Score=339.21 Aligned_cols=316 Identities=20% Similarity=0.320 Sum_probs=249.4
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-H
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-L 151 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l 151 (441)
..++|+.|++++++|+.+ .. .....| |+....++++++++++ ++++++|++|+|+++++.+ +
T Consensus 29 ~~~~l~~Nenp~~~~~~~----~~--------~~~~~Y-p~~~~~~l~~~~a~~~----g~~~~~I~~~~Gs~e~i~~~~ 91 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQL----TQ--------QTLNRY-PECQPKAVIENYAAYA----GVKPEQVLVSRGADEGIELLI 91 (351)
T ss_pred CceEecCCCCCCCCChhh----cc--------cccccC-CCCChHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHH
Confidence 469999999998877642 10 234567 4445689999999986 8999999999999999998 4
Q ss_pred HHhcCCC-CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC----CCCccEEEEcCCCCc
Q 013521 152 QMLLGSN-VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST----TSRTDIIFFCSPNNP 226 (441)
Q Consensus 152 ~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~----~~~~~~v~i~~p~NP 226 (441)
..++++| |.|+++.|+|+.|...++..| .+++.++++++ +..+++. ..++++|++||||||
T Consensus 92 ~~~~~~g~~~vli~~P~y~~y~~~~~~~G------------~~~~~v~~~~~--~~~d~~~l~~~~~~~~lv~l~nPnNP 157 (351)
T PRK01688 92 RAFCEPGKDAILYCPPTYGMYSVSAETIG------------VEIRTVPTLDN--WQLDLPAIADNLDGVKVVYVCSPNNP 157 (351)
T ss_pred HHhcCCCCCEEEEcCCCHHHHHHHHHHcC------------CEEEEeecCCC--CCCCHHHHHHhccCCcEEEEeCCCCC
Confidence 6677887 899999999999999999998 58888888643 4444322 258899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccc
Q 013521 227 TGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRY 306 (441)
Q Consensus 227 tG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~ 306 (441)
||.+++.+++++|++.|++ +.+||+||+|.+|.... +...+....+++++++||||.||++|+|+||+++++++
T Consensus 158 TG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~-- 231 (351)
T PRK01688 158 TGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEV-- 231 (351)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHH--
Confidence 9999999999999999976 68899999999987432 22222123468999999999999999999999999887
Q ss_pred cCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEEEc
Q 013521 307 SNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQF 385 (441)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 385 (441)
++.+..... .+.++.+.|.++.++|.+.+.+++++.++.++++++.+.+.|+++ ++....+++++|+|+++
T Consensus 232 ------i~~l~~~~~--~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~ 303 (351)
T PRK01688 232 ------INLLLKVIA--PYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARF 303 (351)
T ss_pred ------HHHHHhccC--CCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEc
Confidence 355554332 234777888888888876555678888899999999999999988 66534457899999998
Q ss_pred CCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 013521 386 PGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLK 438 (441)
Q Consensus 386 ~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~ 438 (441)
+ +..++.+.|++ +||.++++..|. ..++++||++. ++++++.+++.|+
T Consensus 304 ~--~~~~l~~~L~~-~gi~vr~~~~~~-~~~~~iRis~~-~~~e~~~l~~al~ 351 (351)
T PRK01688 304 T--ASSAVFKSLWD-QGIILRDQNKQP-GLSNCLRITIG-TREECQRVIDALR 351 (351)
T ss_pred C--CHHHHHHHHHH-CCeEEEECCCcC-CCCCeEEEeCC-CHHHHHHHHHhhC
Confidence 6 45677777775 599999876553 23679999986 6788899888773
No 97
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.1e-42 Score=336.07 Aligned_cols=321 Identities=23% Similarity=0.414 Sum_probs=259.9
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR- 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~- 150 (441)
.++|+|++|++++++|+.+.+++.+++.. ..+|++..+ .++|+++|+++ ++++++|++|+|+++++..
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~------~~~y~~~~~-~~lr~~ia~~~----~~~~~~i~~~~G~~~~l~~~ 87 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEADK------LHRYPDPDP-AELKQALADYY----GVDPEQILLGNGSDEIIELL 87 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHHH------hhcCCCCCH-HHHHHHHHHHh----CcChHHEEEcCCHHHHHHHH
Confidence 47999999999999999999999987632 246766555 89999999997 6888999999999999986
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC---C--CCCccEEEEcCCCC
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS---T--TSRTDIIFFCSPNN 225 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~--~~~~~~v~i~~p~N 225 (441)
+..++++||+|++++|+|+.+...+...| .+++.++++.++ ..+++ + .+++++|++++|+|
T Consensus 88 ~~~l~~~gd~v~~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~--~~d~~~l~~~~~~~~~~v~l~~p~N 153 (346)
T TIGR01141 88 IRAFLEPGDAVLVPPPTYSMYEISAKIHG------------AEVVKVPLDEDG--QLDLEDILVAIDDKPKLVFLCSPNN 153 (346)
T ss_pred HHHhcCCCCEEEEcCCCHHHHHHHHHHcC------------CeEEEeccCCCC--CCCHHHHHHhcCCCCCEEEEeCCCC
Confidence 56778999999999999999888888888 588889887642 23322 1 36789999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccc
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELR 305 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~ 305 (441)
|||.++|.++++++++.|+ +++++|+||+|.++.....+.+... ..+++++++|+||.+|++|+|+||+++++++
T Consensus 154 ptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~---~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~- 228 (346)
T TIGR01141 154 PTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTLPLLA---EYPNLIVLRTLSKAFGLAGLRIGYAIANAEI- 228 (346)
T ss_pred CCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCccHHHHHh---hCCCEEEEehhhHhhhchhhhceeeecCHHH-
Confidence 9999999999999999887 7999999999997765432222221 1246899999999998899999999998876
Q ss_pred ccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEEE
Q 013521 306 YSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQ 384 (441)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 384 (441)
.+.+..... ..+.+.++|.++.+++++. .++++.+++++++++.+.+.|+++ |+++.+ .+|+|+|++
T Consensus 229 -------~~~~~~~~~--~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~ 296 (346)
T TIGR01141 229 -------IDALNKVRA--PFNLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYP-SDANFVLIR 296 (346)
T ss_pred -------HHHHHhccC--CCCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC-CcCCEEEEe
Confidence 355554332 2446889999998888753 367888999999999999999988 888654 578999999
Q ss_pred cCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 013521 385 FPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLK 438 (441)
Q Consensus 385 ~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~ 438 (441)
++. ++.++.+.|.+ +||.+.||+.|+.. ++++|+++. ++++++++++.|+
T Consensus 297 ~~~-~~~~~~~~L~~-~gI~v~~g~~f~~~-~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 297 FPR-DADALFEALLE-KGIIVRDLNSYPGL-PNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred cCC-CHHHHHHHHHH-CCeEEEeCCCcCCC-CCeEEEecC-CHHHHHHHHHHhC
Confidence 986 66777777665 59999999988644 789999975 7889999998774
No 98
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3.3e-42 Score=329.40 Aligned_cols=304 Identities=19% Similarity=0.242 Sum_probs=233.3
Q ss_pred CeEEeCCCCCCCCCc-HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH
Q 013521 73 RLIRLGIGDTTQPIP-DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL 151 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~-~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l 151 (441)
++++|+.|++++++| +.+.+ ..+. .|+. +..+||++||+++ + +++|++|+|+++++.++
T Consensus 21 ~~i~l~~ne~p~~~~~~~~~~---~~~~---------~yp~--~~~~Lr~~ia~~~----~--~~~I~it~Gs~~al~~~ 80 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAIPA---DAWA---------RLPE--TDDGLEAAARAYY----G--APQLLPVAGSQAAIQAL 80 (330)
T ss_pred HheeecCCcCCCCCCCcccCH---HHHH---------hCCC--ChHHHHHHHHHHh----C--CCCEEECcCHHHHHHHH
Confidence 579999998776544 22211 2222 3643 3489999999997 3 47999999999999986
Q ss_pred HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCC
Q 013521 152 QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAA 231 (441)
Q Consensus 152 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~ 231 (441)
. .+.+||+|++++|+|+.+...++..| .+++.++.+.. .. ...+++++++||||||||.++
T Consensus 81 ~-~~~~gd~v~v~~P~y~~~~~~~~~~g------------~~~~~v~~~~~---~~---~~~~~~~v~l~nP~NPTG~~~ 141 (330)
T PRK05664 81 P-RLRAPGRVGVLSPCYAEHAHAWRRAG------------HQVRELDEAEV---EA---ALDSLDVLVVVNPNNPTGRRF 141 (330)
T ss_pred H-HccCCCEEEEcCCChHHHHHHHHHcC------------CeEEEechhhH---hh---hhcCCCEEEEeCCcCCCCCcc
Confidence 4 35899999999999999999999999 58888887421 11 124678899999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCch
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYP 311 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~ 311 (441)
|.+++++|+++|++++++||+||+|.++.. ..++..++ ..+++++++||||.+|+||+|+||+++|+++
T Consensus 142 s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~---~~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l------- 210 (330)
T PRK05664 142 DPARLLAWHARLAARGGWLVVDEAFMDNTP---QHSLAACA-HRPGLIVLRSFGKFFGLAGARLGFVLAEPAL------- 210 (330)
T ss_pred CHHHHHHHHHHHHhcCCEEEEECCcccCCC---cccccccc-cCCCEEEEeeccccccCCCcceEEEEeCHHH-------
Confidence 999999999999999999999999987652 13455554 2468999999999999999999999999887
Q ss_pred hHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCChH
Q 013521 312 VIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSW 391 (441)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (441)
++.+..... ....+.+.|.++.++|.+. .+.++.++.++++++.+.+.|+++|+...+ ..++|+|++++ ++.
T Consensus 211 -~~~~~~~~~--~~~~~~~~~~~~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~f~~~~~~--~~~ 282 (330)
T PRK05664 211 -LRALAELLG--PWTVSGPTRWLAQAALADT--PWQRRQRERLLAASQRLAALLRRHGLTPAG-GCALFQWVRTE--DAA 282 (330)
T ss_pred -HHHHHHhcC--CCCCCHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CcceEEEEecC--CHH
Confidence 455554432 2347888999999999753 445788999999999999999998765322 23478888875 456
Q ss_pred HHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 392 DVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 392 ~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
++.+.+. ++||.|.+ |+ ..+++||+++.++++.+++++.|+++
T Consensus 283 ~~~~~l~-~~gi~v~~---f~--~~~~iRis~~~~~~~~~~l~~al~~~ 325 (330)
T PRK05664 283 ALHEFLA-RRGILTRL---FE--QPASLRFGLPADEADWARLDQALLAY 325 (330)
T ss_pred HHHHHHH-HCCeEEEE---CC--CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence 6666655 55999974 54 35799999975566666666666543
No 99
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=315.92 Aligned_cols=316 Identities=22% Similarity=0.317 Sum_probs=266.1
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHhh----hCCCCCCcEEEcCCcHHHHHHH-HHhcCCCCEEEEeCCCchhhHhHHHHhcc
Q 013521 106 GYKGYGAEQGNMALRTAIADKFYK----DMGIEGDEIFISDGAQSDISRL-QMLLGSNVTVAVQDPSFPAYIDTSVIVGQ 180 (441)
Q Consensus 106 ~~~~Y~~~~g~~~lr~~ia~~l~~----~~~~~~~~I~~t~G~~~al~~l-~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~ 180 (441)
.+..|++..|..++|+++|+++.+ ....+|+++++|+|++++.+++ +.|.+|||..++++|-|+++..-++....
T Consensus 113 ~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTg 192 (471)
T KOG0256|consen 113 ELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTG 192 (471)
T ss_pred hHhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccC
Confidence 344688888999999999999964 3446899999999999999985 77789999999999999999776665432
Q ss_pred ccccccccCccceeEEeecCCCCCccCCCCC-----------CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcE
Q 013521 181 AGKFLKETGKYRNIVYMNCRPENNFFPDLST-----------TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSI 249 (441)
Q Consensus 181 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----------~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ 249 (441)
++++++.+...++|..+.++ ..++|.|+|+||+||.|.+++++++..++++|.++++.
T Consensus 193 -----------veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniH 261 (471)
T KOG0256|consen 193 -----------VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIH 261 (471)
T ss_pred -----------ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceE
Confidence 69999999988888776432 36899999999999999999999999999999999999
Q ss_pred EEEcccccccccCCC-CCcccccCC----CcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhc
Q 013521 250 IVYDSAYAAYITDPS-PRSIYEIPG----AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCF 324 (441)
Q Consensus 250 ii~De~~~~~~~~~~-~~~~~~~~~----~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (441)
+|+||+|+.-+|+.. ..|++++.. .++++.++.|+||-+|+||+|+|.+...++.+ .....+ ...+
T Consensus 262 vI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~V-------vsaA~k--mssf 332 (471)
T KOG0256|consen 262 VISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDV-------VSAATK--MSSF 332 (471)
T ss_pred EEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHH-------HHHHHH--Hhhc
Confidence 999999998888754 566665421 46889999999999999999999999988775 333333 3345
Q ss_pred CCCcHHHHHHHHHhcCCCcH--HHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCC-------CChHHHHH
Q 013521 325 NGASNIVQAGGLACLSPDGF--QALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG-------SSSWDVFA 395 (441)
Q Consensus 325 ~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 395 (441)
..+|...|..+..+|.|..+ .+++...++++.+.+++.+.|+++||.+.+..+|.|+|+++.. ..+.++.+
T Consensus 333 ~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~ 412 (471)
T KOG0256|consen 333 GLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWE 412 (471)
T ss_pred cCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHH
Confidence 56899999999999997655 5789999999999999999999999999998999999999862 12346788
Q ss_pred HHHHhcCeEEeCCCCcCCCCCCeEEEEeecCH-HHHHHHHHHHHhhC
Q 013521 396 EILEKTHILTIPGSGFGPGGNEHIRVSAFGHR-EYISEACRRLKNFL 441 (441)
Q Consensus 396 ~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~-~~~~~~l~~l~~~l 441 (441)
+++.+-++.+.||+.|....++|+|++|++.. +.++-+++||++++
T Consensus 413 ~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~ 459 (471)
T KOG0256|consen 413 RILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFL 459 (471)
T ss_pred HHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHH
Confidence 88988899999999999989999999998754 44555999998763
No 100
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.5e-42 Score=333.68 Aligned_cols=320 Identities=23% Similarity=0.346 Sum_probs=251.6
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEE-cCCcHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFI-SDGAQSDISR 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~-t~G~~~al~~ 150 (441)
.++++|++|++++++++.+.+++.+.+.. ...|++. ...++|+++|+|+ ++++++|++ |+|+++++.+
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~------~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~~~~Ga~~~i~~ 102 (361)
T PRK00950 34 ESIIKLGSNENPLGPSPKAVEAIEKELSK------IHRYPEP-DAPELREALSKYT----GVPVENIIVGGDGMDEVIDT 102 (361)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHHHHHh------hcCCCCC-CHHHHHHHHHHHh----CCCHHHEEEeCCCHHHHHHH
Confidence 47999999999888888899998887653 2357554 4599999999997 788999999 8999999987
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcCCC
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSPN 224 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p~ 224 (441)
+..++++||.|++++|+|+.+...++..| .+++.++.+.+ +..+++. .++++++++++||
T Consensus 103 ~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~~~~p~ 168 (361)
T PRK00950 103 LMRTFIDPGDEVIIPTPTFSYYEISAKAHG------------AKPVYAKREED--FSLDVDSVLNAITEKTKVIFLCTPN 168 (361)
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHHHcC------------CEEEEeecCCC--CCcCHHHHHHHhccCCCEEEEeCCC
Confidence 56667999999999999999988888888 58888885433 3333222 2578999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
||||.++|.+++++ +|+++|+++|+||+|.+|.. ....++. ...+++++++||||.+|+||+|+||+++++++
T Consensus 169 nptG~~~~~~~l~~---l~~~~~~~li~De~y~~~~~-~~~~~~~---~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~ 241 (361)
T PRK00950 169 NPTGNLIPEEDIRK---ILESTDALVFVDEAYVEFAE-YDYTPLA---LEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWL 241 (361)
T ss_pred CCCCCCcCHHHHHH---HHHHCCcEEEEECchhhhCc-cchHHHH---HhcCCEEEEEeehHhhcCchhhcchhcCCHHH
Confidence 99999999665554 55678999999999998762 2122221 12367899999999999999999999999887
Q ss_pred cccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEE
Q 013521 305 RYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQ 384 (441)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 384 (441)
++.+..... ..+.+.+.|.++.+++.+ ..++++.++.++++++.+.+.|+ +.+. +++++|+|++
T Consensus 242 --------~~~~~~~~~--~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~---~~~~-~~~~~~i~~~ 305 (361)
T PRK00950 242 --------IDYYMRAKT--PFSLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP---FKVY-PSEANFVLVD 305 (361)
T ss_pred --------HHHHHHhcC--CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC---eeEC-CCcceEEEEE
Confidence 345554332 234778899888888874 35567888888888888888776 4544 4688999999
Q ss_pred cCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 385 FPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 385 ~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
+++.++.++.+.++++ ||.+.||..|...++++|||+++ +.+++++++++|++++
T Consensus 306 ~~~~~~~~~~~~l~~~-gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 306 VTPMTAKEFCEELLKR-GVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred CCCCCHHHHHHHHHHC-CEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 9765677888887765 99999999887656789999986 6678999999998764
No 101
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-42 Score=327.23 Aligned_cols=311 Identities=22% Similarity=0.345 Sum_probs=235.6
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL 151 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l 151 (441)
.++++|+.|++++++|+.+.+++.+++.. ....+|+ ..|..++|+++|+|+ ++++++|++|+|+++++.++
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~-~~g~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~ 88 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKR----VPFNRYP-HITSDPLREAIAEFY----GLDAENIAVGNGSDELISYL 88 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhc----CccccCC-CCCHHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHH
Confidence 35799999999998889999999888753 2355785 579999999999997 68999999999999999986
Q ss_pred HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC-CCCccEEEEcCCCCcccc
Q 013521 152 QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST-TSRTDIIFFCSPNNPTGH 229 (441)
Q Consensus 152 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~-~~~~~~v~i~~p~NPtG~ 229 (441)
...+ +||.|+++.|+|+.+...++..| .+++.++.+.+..++++ ++. ..++++++++|||||||.
T Consensus 89 ~~~~-~gd~V~v~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~~~~P~NPtG~ 155 (337)
T PRK03967 89 VKLF-EGKHIVITPPTFGMYSFYAKLNG------------IPVIDVPLKEDFTIDGERIAEKAKNASAVFICSPNNPTGN 155 (337)
T ss_pred HHHh-CCCeEEEeCCChHHHHHHHHHcC------------CeEEEeecCCCCCcCHHHHHHhccCCCEEEEeCCCCCCCC
Confidence 5555 79999999999999988888888 58888888643222221 111 357899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCC
Q 013521 230 AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNG 309 (441)
Q Consensus 230 ~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~ 309 (441)
+++.+++.+++ +++++||+||+|.+|.... ..++ . +..+++|+++||||.||+||+|+||+++++++
T Consensus 156 ~~~~~~l~~i~----~~~~~ii~De~y~~~~~~~-~~~~--~-~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~----- 222 (337)
T PRK03967 156 LQPEEEILKVL----ETGKPVVLDEAYAEFSGKS-LIGL--I-DEYPNLILLRTFSKAFGLAGIRAGYAIANEEI----- 222 (337)
T ss_pred CCCHHHHHHHH----hcCCEEEEECchhhhcccc-hHHH--H-hhCCCEEEEecchHhhcchhhhheeeecCHHH-----
Confidence 99976666554 4799999999999876321 1122 1 22467999999999999999999999998877
Q ss_pred chhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCC
Q 013521 310 YPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSS 389 (441)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 389 (441)
++.+..... ..+++.++|.++.+++++ .++..+.++.+.++++.+.+.|.+.. .+++++|+|++++
T Consensus 223 ---i~~~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~~~~~~~--- 288 (337)
T PRK03967 223 ---IDALYRIKP--PFSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYA----YPSDANFLLLKLD--- 288 (337)
T ss_pred ---HHHHHhhcC--CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCc----CCCCCcEEEEhHH---
Confidence 455655443 235789999999988874 33455555666777888888887642 3578999999873
Q ss_pred hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec--CHHHHHHHHHHHH
Q 013521 390 SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG--HREYISEACRRLK 438 (441)
Q Consensus 390 ~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~~~~~~l~~l~ 438 (441)
+.+.+++ +||.++++.. ..++++||+++. +.+.+.++++++.
T Consensus 289 ---~~~~l~~-~gi~v~~~~~---~~~~~~Ri~~~~~~~~~~l~~~l~~~~ 332 (337)
T PRK03967 289 ---AYDYLLE-NGIVVRKLSG---RLEGHIRVTVGKREENDEFIKALKEIK 332 (337)
T ss_pred ---HHHHHHH-CCEEEEeCCC---CCCCeEEEecCCHHHHHHHHHHHHHHH
Confidence 5566665 5999998642 246799999865 2344555555543
No 102
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.8e-41 Score=324.50 Aligned_cols=314 Identities=21% Similarity=0.299 Sum_probs=247.8
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
+++.++|+.|.++.++| ..+... ..+.+|+++.+ .++|+++|+++ ++++++|++|+|+++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~--~~~~~~---------~~~~~y~~~~~-~~lr~~la~~~----~~~~~~i~~t~G~~~~i~~ 79 (330)
T TIGR01140 16 PEDWLDFSTGINPLGPP--VPPIPA---------SAWARYPDPEY-DELRAAAAAYY----GLPAASVLPVNGAQEAIYL 79 (330)
T ss_pred hhheeEccccCCCCCCC--hhhcch---------HHHhhCCCccH-HHHHHHHHHHh----CCChhhEEECCCHHHHHHH
Confidence 45689999999887765 111111 33457866655 99999999997 7889999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccC
Q 013521 151 LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHA 230 (441)
Q Consensus 151 l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~ 230 (441)
+..++.+| .|++++|+|..+...+...| .+++.++ +.+ .+... ..+++++++++||||||.+
T Consensus 80 ~~~~l~~g-~vl~~~p~y~~~~~~~~~~g------------~~~~~~~-d~~-~l~~~---~~~~~~v~i~~p~NPtG~~ 141 (330)
T TIGR01140 80 LPRLLAPG-RVLVLAPTYSEYARAWRAAG------------HEVVELP-DLD-RLPAA---LEELDVLVLCNPNNPTGRL 141 (330)
T ss_pred HHHHhCCC-eEEEeCCCcHHHHHHHHHcC------------CEEEEeC-CHH-HHHhh---cccCCEEEEeCCCCCCCCC
Confidence 76667888 69999999999999998888 5777776 221 22111 2457899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCc
Q 013521 231 ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY 310 (441)
Q Consensus 231 ~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~ 310 (441)
++.+++++|+++|++||++||+||+|.++.... ++..+.+..+++|+++||||.+|++|+|+||+++++++
T Consensus 142 ~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~------ 212 (330)
T TIGR01140 142 IPPETLLALAARLRARGGWLVVDEAFIDFTPDA---SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPAL------ 212 (330)
T ss_pred CCHHHHHHHHHHhHhcCCEEEEECcccccCCcc---chhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHH------
Confidence 999999999999999999999999999887542 33333223467999999999999999999999998887
Q ss_pred hhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCceEEEEEcCCCC
Q 013521 311 PVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG-LKVNGGKNAPYVWVQFPGSS 389 (441)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~ 389 (441)
.+.+..... ..+++.++|.++.+++++. .+.++.+++++++++.+.+.|++++ +++.+ .+|+|+|++++ +
T Consensus 213 --~~~l~~~~~--~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~f~~~~~~--~ 283 (330)
T TIGR01140 213 --LARLREALG--PWTVNGPARAAGRAALADT--AWQAATRARLAAERARLAALLARLGGLEVVG-GTALFLLVRTP--D 283 (330)
T ss_pred --HHHHHhcCC--CCCchHHHHHHHHHHHhch--HHHHHHHHHHHHHHHHHHHHHHhCCCceECC-CCCeEEEEEcC--C
Confidence 355554432 3457889999999999754 3456788999999999999999986 56554 58899999987 3
Q ss_pred hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 013521 390 SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLK 438 (441)
Q Consensus 390 ~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~ 438 (441)
..++++++++ +||.+.||..|...+.++|||++++..++ +.++.+|+
T Consensus 284 ~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l~ 330 (330)
T TIGR01140 284 AAALHEALAR-RGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEALA 330 (330)
T ss_pred HHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhhC
Confidence 5678888776 59999999999654568999999776666 87777663
No 103
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.4e-41 Score=328.82 Aligned_cols=321 Identities=24% Similarity=0.394 Sum_probs=249.1
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-H
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-L 151 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l 151 (441)
++|+|+.|.+++++++.+.+++.+.+.. ...| +..|..++|+++|+++ ++++++|++|+|+++++.. +
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~------~~~y-~~~g~~~lr~~ia~~~----~~~~~~I~~~~G~~~~l~~~~ 91 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG------VNRY-PDMGAVELRAALAEHL----GVPPEHVAVGCGSVALCQQLV 91 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh------cCcC-CCCcHHHHHHHHHHHh----CcCHHHEEECCCHHHHHHHHH
Confidence 5899999999988888999999887653 2357 4579999999999997 6889999999999999987 5
Q ss_pred HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCccc
Q 013521 152 QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPTG 228 (441)
Q Consensus 152 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPtG 228 (441)
..++++||.|+++.|+|..+...++..| .+++.++.++++++.++ +++ .++++++++++||||||
T Consensus 92 ~~~~~~gd~Vli~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG 159 (352)
T PRK03321 92 QATAGPGDEVIFAWRSFEAYPILVQVAG------------ATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTG 159 (352)
T ss_pred HHhcCCCCEEEeCCCCHHHHHHHHHHcC------------CEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcC
Confidence 6678999999999999999888888888 58888888754333222 111 35789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC-CcccccCCCcceeEEEecCCcccCCccceeEEEEeecccccc
Q 013521 229 HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSP-RSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYS 307 (441)
Q Consensus 229 ~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~ 307 (441)
.++|.+++.++++.+ +++++||+||+|.++.+++.. .++..++ ..+++++++||||.||+||+|+||+++++++
T Consensus 160 ~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~--- 234 (352)
T PRK03321 160 TVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVR-DHPNVVVLRTFSKAYGLAGLRVGYAVGHPEV--- 234 (352)
T ss_pred CCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHh-hCCCEEEEecchHHhhhHHHhhhhhcCCHHH---
Confidence 999988888887765 479999999999998876532 3333332 2467999999999999999999999999877
Q ss_pred CCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCC
Q 013521 308 NGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG 387 (441)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 387 (441)
++.+... ....+++.+.|.++.+++... ..+.+. .+.+.++++.+.+.|++.|+.+.+ .+|+|+|++++.
T Consensus 235 -----~~~~~~~--~~~~~~s~~~q~~a~~~l~~~-~~~~~~-~~~~~~~r~~~~~~L~~~~~~~~~-~~g~~i~i~l~~ 304 (352)
T PRK03321 235 -----IAALRKV--AVPFSVNSLAQAAAIASLAAE-DELLER-VDAVVAERDRVRAALRAAGWTVPP-SQANFVWLPLGE 304 (352)
T ss_pred -----HHHHHHh--cCCCCCCHHHHHHHHHHhcCH-HHHHHH-HHHHHHHHHHHHHHHHHCCCccCC-CCCCEEEEeCCC
Confidence 4555543 234568899999888888732 233343 444556677889999988877654 578999999863
Q ss_pred CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 388 SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 388 ~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
.+.++.+.+ +++||.+.| |+ .++|||++ .+.++.++++++|+++
T Consensus 305 -~~~~~~~~l-~~~gI~v~~---~~---~~~iRi~~-~~~~~~~~~~~al~~~ 348 (352)
T PRK03321 305 -RTADFAAAA-AEAGVVVRP---FA---GEGVRVTI-GAPEENDAFLRAARAW 348 (352)
T ss_pred -CHHHHHHHH-HHCCEEEEc---cC---CCcEEEee-CCHHHHHHHHHHHHHH
Confidence 456677776 556999987 43 35699997 5677888888888765
No 104
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.9e-40 Score=314.82 Aligned_cols=301 Identities=20% Similarity=0.312 Sum_probs=222.0
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL 151 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l 151 (441)
.++++|+.|+++.+ |+.+.+++.+++.. ...|+. ...+|+++|+++ + ++|++|+|+++++.++
T Consensus 8 ~~~i~l~~~~np~~-p~~~~~a~~~~~~~------~~~yp~---~~~l~~~ia~~~----~---~~I~vt~G~~~al~~~ 70 (311)
T PRK08354 8 EGLIDFSASVNPYP-PEWLDEMFERAKEI------SGRYTY---YEWLEEEFSKLF----G---EPIVITAGITEALYLI 70 (311)
T ss_pred cceeEecCCCCCCC-CHHHHHHHHHHHHH------hhcCCC---hHHHHHHHHHHH----C---CCEEECCCHHHHHHHH
Confidence 36899999988875 57888898887543 235642 467999999986 3 5899999999999986
Q ss_pred HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCC
Q 013521 152 QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAA 231 (441)
Q Consensus 152 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~ 231 (441)
..++.+||.|++++|+|+.+...++..| .+++.++.+.+ .+. +. ..+++++++||||||||.++
T Consensus 71 ~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~~~~d~~-~l~-~~--~~~~~~vi~~~P~NPTG~~~ 134 (311)
T PRK08354 71 GILALRDRKVIIPRHTYGEYERVARFFA------------ARIIKGPNDPE-KLE-EL--VERNSVVFFCNPNNPDGKFY 134 (311)
T ss_pred HHhhCCCCeEEEeCCCcHHHHHHHHHcC------------CEEeecCCCHH-HHH-Hh--hcCCCEEEEecCCCCCCCcc
Confidence 5666699999999999999999999999 46766654332 111 11 13567899999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCch
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYP 311 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~ 311 (441)
|.+++++|+++|++||++||+||+|.+|.+++.. . .++++++++||||.||+||+|+||+++ .
T Consensus 135 ~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~-----~--~~~~vi~~~S~SK~~~l~GlRiG~~v~---~------- 197 (311)
T PRK08354 135 NFKELKPLLDAVEDRNALLILDEAFIDFVKKPES-----P--EGENIIKLRTFTKSYGLPGIRVGYVKG---F------- 197 (311)
T ss_pred CHHHHHHHHHHhhhcCcEEEEeCcchhccccccc-----c--CCCcEEEEeccHhhcCCccceeeeeee---h-------
Confidence 9999999999999999999999999998876421 1 146899999999999999999999998 2
Q ss_pred hHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCChH
Q 013521 312 VIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSW 391 (441)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (441)
.+.+..... ....+.+.+.++.+++. ..++++++.++.++++++.+.+.+. .+ +.++|+|++++ ++.
T Consensus 198 -~~~l~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~------~~-~~~~~~~~~~~--~~~ 264 (311)
T PRK08354 198 -EEAFRSVRM--PWSIGSTGYAFLEFLIE-DDFEHLRKTMPLIWREKERFEKALY------VK-SDANFFIKDVG--DAE 264 (311)
T ss_pred -HHHHHHcCC--CccCCHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhcC------CC-CCCcEEEEECC--CHH
Confidence 244444332 23356677776666665 3345566666666666655544431 23 45667777765 456
Q ss_pred HHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHh
Q 013521 392 DVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKN 439 (441)
Q Consensus 392 ~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~ 439 (441)
++++.+. ++||.+.||+.|+. ++++||+++.+ ++.+++++.|++
T Consensus 265 ~~~~~l~-~~gv~v~~g~~f~~--~~~iRi~~~~~-~~~~~l~~al~~ 308 (311)
T PRK08354 265 KFVEFLK-RNGILVRDCTSFGL--PGYIRFSVRDR-EENEKLIRALRE 308 (311)
T ss_pred HHHHHHH-HCCeEEEecccCCC--CCeEEEEeCCH-HHHHHHHHHHHH
Confidence 7777665 55999999999963 58999998643 334444444443
No 105
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-40 Score=300.98 Aligned_cols=313 Identities=20% Similarity=0.324 Sum_probs=250.1
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHhhhCC---CCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccc
Q 013521 106 GYKGYGAEQGNMALRTAIADKFYKDMG---IEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQA 181 (441)
Q Consensus 106 ~~~~Y~~~~g~~~lr~~ia~~l~~~~~---~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~ 181 (441)
..++|++..|.++|...+.++-.--++ ...-+|++|+|.+.+++. +..++++||.|+++.++|++.....+..|
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~g-- 169 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALG-- 169 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccC--
Confidence 456899999999999999996541222 234599999999999997 78889999999999999999999999998
Q ss_pred cccccccCccceeEEeecCCCCCccCCCCC-----------CCCccEEEEcCC--CCccccCCCHHHHHHHHHHHHHcCc
Q 013521 182 GKFLKETGKYRNIVYMNCRPENNFFPDLST-----------TSRTDIIFFCSP--NNPTGHAATWQQLKKLVEFAKANGS 248 (441)
Q Consensus 182 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----------~~~~~~v~i~~p--~NPtG~~~~~~~~~~i~~~a~~~~~ 248 (441)
+.+++|+++.++-..+.+++ .++++++| |-| |||||.+++.+++++|.++|++||+
T Consensus 170 ----------v~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlY-TIPTgqNPTG~tls~errk~iy~LArKyDf 238 (472)
T KOG0634|consen 170 ----------VKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLY-TIPTGQNPTGNTLSLERRKKIYQLARKYDF 238 (472)
T ss_pred ----------ceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEE-eCcCCCCCCCCccCHHHHHHHHHHHHHcCE
Confidence 68999999876432222221 25566655 555 9999999999999999999999999
Q ss_pred EEEEcccccccccCC---C------CC-----------cccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccC
Q 013521 249 IIVYDSAYAAYITDP---S------PR-----------SIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN 308 (441)
Q Consensus 249 ~ii~De~~~~~~~~~---~------~~-----------~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~ 308 (441)
+||+||.|..+.++. . +. +..+++ .++|||-..||||.++ ||+|+||+.+++.++
T Consensus 239 LIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslD-tdGrVIr~dSFSKiia-PGlRlG~it~~~~~l--- 313 (472)
T KOG0634|consen 239 LIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLD-TDGRVIRNDSFSKIIA-PGLRLGWITGNSLFL--- 313 (472)
T ss_pred EEEecCccceeeccccCCCccccCccccHHHHHHhhcCCccccc-ccccEEeccchhhhhc-CcceeEEeecCHHHH---
Confidence 999999999776652 1 11 222332 4689999999999997 999999999998774
Q ss_pred CchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCC---CcH-HHHHHHHHHHHHHHHHHHHHHHhC---C-CeeeCCCCceE
Q 013521 309 GYPVIKDFNRIVCTCFNGASNIVQAGGLACLSP---DGF-QALRTVIDYYKENAKIIVDAFQSL---G-LKVNGGKNAPY 380 (441)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~-~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~~~~~~~ 380 (441)
+++.+....+..++|.+.|..+.+.++. +|+ +|+.+++..|..|+..+..+|.+. + .++.+|.+|+|
T Consensus 314 -----~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmF 388 (472)
T KOG0634|consen 314 -----KRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMF 388 (472)
T ss_pred -----HHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceE
Confidence 5666666666667888888888887773 334 799999999999999999999986 5 67788899999
Q ss_pred EEEEcC--------CCC-hHHHHHHHHHhcCeEEeCCCCcCCC-C---CC-eEEEEee-cCHHHHHHHHHHHHhhC
Q 013521 381 VWVQFP--------GSS-SWDVFAEILEKTHILTIPGSGFGPG-G---NE-HIRVSAF-GHREYISEACRRLKNFL 441 (441)
Q Consensus 381 ~~~~~~--------~~~-~~~~~~~ll~~~gi~v~pg~~f~~~-~---~~-~iRls~~-~~~~~~~~~l~~l~~~l 441 (441)
+|++++ +.+ .++.....+.++||.+.+|..|... . .+ |+|++++ .+.++++++++|+..++
T Consensus 389 iwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~i 464 (472)
T KOG0634|consen 389 IWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVI 464 (472)
T ss_pred EEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHH
Confidence 999996 122 3456666777889999999999533 1 23 9999984 48899999999998753
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=6.2e-36 Score=289.30 Aligned_cols=340 Identities=30% Similarity=0.532 Sum_probs=270.7
Q ss_pred EEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhh--CCCCCCcEEEcCCcHHHHHH-H
Q 013521 75 IRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKD--MGIEGDEIFISDGAQSDISR-L 151 (441)
Q Consensus 75 i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~--~~~~~~~I~~t~G~~~al~~-l 151 (441)
+||+.|++++..++...+++.+.-. ......|.+..|..++++.+++++... ....++++++++|+++++.. +
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAAL----RAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhh----ccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 4789999888777777777665111 145557888899999999999999753 33457899999999999987 5
Q ss_pred HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC---CC--CCCCccEEEEcCCCCc
Q 013521 152 QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD---LS--TTSRTDIIFFCSPNNP 226 (441)
Q Consensus 152 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~---~~--~~~~~~~v~i~~p~NP 226 (441)
..+.++||+|+++.|+|+++...++..| .+++.++.+.++.+... ++ ..+++++|++++|+||
T Consensus 77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~ 144 (350)
T cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAG------------AEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNP 144 (350)
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHCC------------CEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCC
Confidence 6667899999999999999999999888 58889998766554331 11 2468999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeec-ccc
Q 013521 227 TGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE-ELR 305 (441)
Q Consensus 227 tG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~-~~~ 305 (441)
||.++|.+++++|+++|+++|+++|+|++|+.+.+.+...+.....+..+.+++++|+||.++.+|+|+||+++++ ++
T Consensus 145 tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~- 223 (350)
T cd00609 145 TGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEEL- 223 (350)
T ss_pred CCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHH-
Confidence 9999999999999999999999999999999877654332211122234668999999999988999999999988 55
Q ss_pred ccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCee-eCCCCceEEEEE
Q 013521 306 YSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKV-NGGKNAPYVWVQ 384 (441)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~ 384 (441)
.+.+.........+++...+.++..+++... ++.++.++.++++++.+.+.|++.+... ..+..|+++|++
T Consensus 224 -------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~ 295 (350)
T cd00609 224 -------LERLKKLLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLD 295 (350)
T ss_pred -------HHHHHHHHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEe
Confidence 4555555555455678888888888887543 6678889999999999999999885443 455689999999
Q ss_pred cCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHh
Q 013521 385 FPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKN 439 (441)
Q Consensus 385 ~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~ 439 (441)
++.....+.+.++++++||.+.++..|...+..++|+++....+++++++++|++
T Consensus 296 ~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~~ 350 (350)
T cd00609 296 LPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLAE 350 (350)
T ss_pred cCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhhC
Confidence 9855456677778888899999998887666789999986669999999999864
No 107
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.4e-33 Score=278.34 Aligned_cols=329 Identities=16% Similarity=0.149 Sum_probs=240.3
Q ss_pred CCCeEEeCCCCC--CCCCcH---HHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcH
Q 013521 71 DARLIRLGIGDT--TQPIPD---IITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQ 145 (441)
Q Consensus 71 ~~~~i~l~~g~~--~~~~~~---~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~ 145 (441)
+.++++|++|+| |+++|. .+.+++.+++. .+..+|++..|..+||+++++++ + .++|++|+|++
T Consensus 35 g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~-----~g~~~Y~~~~g~~~Lreaia~~~----~--~~~vv~t~ggt 103 (460)
T PRK13238 35 GYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMM-----RGDEAYAGSRSYYRLEDAVKDIF----G--YPYTIPTHQGR 103 (460)
T ss_pred CCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHH-----hCCcccCCCCCHHHHHHHHHHHh----C--CCcEEECCCHH
Confidence 568999999998 677766 57788888775 33457999999999999999997 3 35899999999
Q ss_pred HHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCC------CCcc--CCCCC-----
Q 013521 146 SDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPE------NNFF--PDLST----- 211 (441)
Q Consensus 146 ~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~------~~~~--~~~~~----- 211 (441)
+++.+ +..+++||| |++++|.|+.+...+...| .+++.+++++. ++|. +|+++
T Consensus 104 ~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G------------~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i 170 (460)
T PRK13238 104 AAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNG------------ATAVDLVIDEALDTGSRHPFKGNFDLEKLEALI 170 (460)
T ss_pred HHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcC------------CEEEEEeccccccccccccccCCcCHHHHHHHH
Confidence 99998 577899999 9999999999998888888 58888888642 2333 44332
Q ss_pred C----CCccEEEEcCCCCccc-cCCCHHHHHHHHHHHHHcCcEEEEcccccc--cccCC------CCCcccccCCCccee
Q 013521 212 T----SRTDIIFFCSPNNPTG-HAATWQQLKKLVEFAKANGSIIVYDSAYAA--YITDP------SPRSIYEIPGAREVA 278 (441)
Q Consensus 212 ~----~~~~~v~i~~p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~~~~--~~~~~------~~~~~~~~~~~~~~~ 278 (441)
. +++++|++++|+|||| .++|.+++++|.++|++||++||+|+++.. ..+.. .+.++..+ +
T Consensus 171 ~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i------~ 244 (460)
T PRK13238 171 EEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI------A 244 (460)
T ss_pred hhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH------h
Confidence 1 3699999999999998 999999999999999999999999997631 22221 13333322 2
Q ss_pred EEEecCCcccCCcccee------EEEEeeccccccCCchhHHHHHHHH----hh-hcCCCcHHHHHHHHHhcCCC-cHHH
Q 013521 279 IEISSFSKFAGFTGVRL------GWTVVPEELRYSNGYPVIKDFNRIV----CT-CFNGASNIVQAGGLACLSPD-GFQA 346 (441)
Q Consensus 279 i~i~S~SK~~~~~G~r~------G~l~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~a~~~~l~~~-~~~~ 346 (441)
..++|++|.+.++|+|+ ||++++++.+ .+.+.... .. +..+.+...|.|+...+.+. ..++
T Consensus 245 ~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l-------~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~ 317 (460)
T PRK13238 245 REMFSYADGLTMSAKKDAMVNIGGLLCFRDEDL-------FTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDY 317 (460)
T ss_pred hhhcccCcEEEEecccCCCCcceeEEEcChHHH-------HHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHH
Confidence 33456666666666664 3666664322 34443331 11 22233455566666555421 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCC---------ChHHHHHHHHHhcCeEEeCCCCcCCC---
Q 013521 347 LRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGS---------SSWDVFAEILEKTHILTIPGSGFGPG--- 414 (441)
Q Consensus 347 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ll~~~gi~v~pg~~f~~~--- 414 (441)
+.. ..+++++|.+.|.+.|+.+..|.+|+|+++++... .+.+++.+|+++.||.+.|++.|...
T Consensus 318 ~~~----~~~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~ 393 (460)
T PRK13238 318 LAY----RIGQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDP 393 (460)
T ss_pred HHH----HHHHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCC
Confidence 233 23367999999999999999889999999998632 45789999999999999999988421
Q ss_pred --C------CCeEEEEeec---CHHHHHHHHHHHHhh
Q 013521 415 --G------NEHIRVSAFG---HREYISEACRRLKNF 440 (441)
Q Consensus 415 --~------~~~iRls~~~---~~~~~~~~l~~l~~~ 440 (441)
+ ..++||++.. +.+.++.+.++|+.+
T Consensus 394 ~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~ 430 (460)
T PRK13238 394 KTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAV 430 (460)
T ss_pred CCccccCCccceEEEecccccCCHHHHHHHHHHHHHH
Confidence 1 4789999866 889999999888764
No 108
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-33 Score=243.77 Aligned_cols=342 Identities=19% Similarity=0.300 Sum_probs=246.4
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhcc----CCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALS----TVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQ 145 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~----~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~ 145 (441)
++.|.|+-|.|.. . |++.+..++...+.. ..+.+-+|..++|...|.+++++.+++ ++++++.||.+|+|+|
T Consensus 30 ~g~imLggGNPa~-i-Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQ 107 (417)
T COG3977 30 PGAIMLGGGNPAR-I-PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQ 107 (417)
T ss_pred CCceeeCCCCccc-C-hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCcc
Confidence 4589999887642 2 333333333332222 123455899999999999999999987 8889999999999999
Q ss_pred HHHHHHHHhcC----CCC--EEEE-eCCCchhhHhHHHHhccccccccccCccceeEE----eecCCCCCcc--CCCC--
Q 013521 146 SDISRLQMLLG----SNV--TVAV-QDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVY----MNCRPENNFF--PDLS-- 210 (441)
Q Consensus 146 ~al~~l~~l~~----~gd--~Vlv-~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~----v~~~~~~~~~--~~~~-- 210 (441)
++.+.++.++. .|+ .|++ ..|.|-+|-.+.-.-. -.+. +...+++.|. .|.+
T Consensus 108 s~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-------------~fVs~kP~iel~~~g~FKY~vDF~~l 174 (417)
T COG3977 108 SAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-------------LFVSAKPNIELLPAGQFKYHVDFEHL 174 (417)
T ss_pred chHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-------------ceeeccCCcccccccceeeccCHHHc
Confidence 99998877762 332 4555 6789988754322111 0111 1112223332 2222
Q ss_pred -CCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccC
Q 013521 211 -TTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAG 289 (441)
Q Consensus 211 -~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~ 289 (441)
...++.+|.++-|.||||.+++.+++.+|-++|++||+.+|.|.+|+.-...-....+.-+ ..+++|.|.|+||. |
T Consensus 175 ~i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~--w~~NiilC~SLSK~-G 251 (417)
T COG3977 175 HIGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPL--WNENIILCMSLSKL-G 251 (417)
T ss_pred ccccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccccc--CCCCEEEEeehhhc-C
Confidence 2478899999999999999999999999999999999999999999852111001111111 34789999999997 5
Q ss_pred CccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHH-HH-HHHHHHHHHHHHHHHHHHHh
Q 013521 290 FTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQ-AL-RTVIDYYKENAKIIVDAFQS 367 (441)
Q Consensus 290 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~-~~~~~~~~~~~~~l~~~L~~ 367 (441)
+||.|+|.+++++++ ++.+..+.......++.+.++.+..+++..... .- +-.+--|+++.+...+.|++
T Consensus 252 LPG~R~GIiIane~v--------iqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~ 323 (417)
T COG3977 252 LPGSRCGIIIANEKV--------IQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRR 323 (417)
T ss_pred CCCcceeEEEccHHH--------HHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 899999999999888 466666666556667788888888888865552 22 33455677777777777765
Q ss_pred C----CCeeeCCCCceEEEEEcC--CCChHHHHHHHHHhcCeEEeCCCCcCC-------CCCCeEEEEeecCHHHHHHHH
Q 013521 368 L----GLKVNGGKNAPYVWVQFP--GSSSWDVFAEILEKTHILTIPGSGFGP-------GGNEHIRVSAFGHREYISEAC 434 (441)
Q Consensus 368 ~----g~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~~~~iRls~~~~~~~~~~~l 434 (441)
. .+....|+++.|+|+++. ...+++++++|.++ |+.+.||+.|.+ ....|+|+++..+++.++.++
T Consensus 324 ~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~-Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gv 402 (417)
T COG3977 324 YLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKAR-GVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGV 402 (417)
T ss_pred hcCccceeeecCCcceeehhhhccCCCCHHHHHHHHHhC-eEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHH
Confidence 4 456678899999999997 56778888886655 999999999853 346899999988999999999
Q ss_pred HHHHhh
Q 013521 435 RRLKNF 440 (441)
Q Consensus 435 ~~l~~~ 440 (441)
++|.+.
T Consensus 403 a~lae~ 408 (417)
T COG3977 403 AILAEE 408 (417)
T ss_pred HHHHHH
Confidence 999764
No 109
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=2.5e-32 Score=261.06 Aligned_cols=306 Identities=16% Similarity=0.165 Sum_probs=227.6
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEE
Q 013521 84 QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVA 162 (441)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vl 162 (441)
+...|.+.++..+++..++ ++..-..+|++.+|+|+ +++++++++++|+.+++.. +..++++||.|+
T Consensus 32 l~~~~~~~~~~~~~~~~~~--------g~~~~~~~Le~~lA~~~----g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vl 99 (346)
T TIGR03576 32 LAGGFKIDEEDLELLETYV--------GPAIFEEKVQELGREHL----GGPEEKILVFNRTSSAILATILALEPPGRKVV 99 (346)
T ss_pred CCCChhHHHHHHHHHHHhc--------CCHHHHHHHHHHHHHHc----CCCcceEEEECCHHHHHHHHHHHhCCCCCEEE
Confidence 3456888888888887642 12345566777777775 8889999999999999987 678889999999
Q ss_pred Ee---CCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHH
Q 013521 163 VQ---DPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKL 239 (441)
Q Consensus 163 v~---~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i 239 (441)
++ .|+|+.+...++..|. +++... +.+ . +...+++++|++ +++||+|.+++.+++++|
T Consensus 100 i~~~d~p~~~s~~~~~~l~ga------------~~~~~~-~l~-~----l~~~~~~~lIii-tg~s~~G~v~~~~~L~~i 160 (346)
T TIGR03576 100 HYLPEKPAHPSIPRSCKLAGA------------EYFESD-ELS-E----LKKIDGTSLVVI-TGSTMDLKVVSEEDLKRV 160 (346)
T ss_pred ECCCCCCCchhHHHHHHHcCC------------EEeccC-CHH-H----HhhCcCceEEEE-ECCCCCCcccCHHHHHHH
Confidence 74 5799999888888883 432211 111 1 222346788777 557999999999999999
Q ss_pred HHHHHHcCcEEEEcccccccccCC-CCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHH
Q 013521 240 VEFAKANGSIIVYDSAYAAYITDP-SPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNR 318 (441)
Q Consensus 240 ~~~a~~~~~~ii~De~~~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~ 318 (441)
+++|++||+++|+||+|+.+.... ...+..... ..++++|||| +++|+|+||+++++++ ++.+..
T Consensus 161 ~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~----~divv~s~SK--alaG~r~G~v~~~~~l--------i~~l~~ 226 (346)
T TIGR03576 161 IKQAKSKEAIVLVDDASGARVRRLYGQPPALDLG----ADLVVTSTDK--LMDGPRGGLLAGRKEL--------VDKIKS 226 (346)
T ss_pred HHHHHHcCCEEEEECCccccccccCCCCCHHHcC----CcEEEeccch--hccccceEEEEeCHHH--------HHHHHH
Confidence 999999999999999999765321 111222221 2377889999 4689999999999887 456665
Q ss_pred HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCChHHHHHHHH
Q 013521 319 IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEIL 398 (441)
Q Consensus 319 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 398 (441)
.......+.+++.|.++.++|+... .+.+++.++++++++.+.++. +.+.+ +.++|+|++++..++.+++..++
T Consensus 227 ~~~~~~~s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~-~~~~f~~~~~~~~~~~~~~~~ll 300 (346)
T TIGR03576 227 VGEQFGLEAQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVER-TPTGFVIKGVEEEKLIEIGLDLL 300 (346)
T ss_pred hhcCcccCccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCc-CCCeEEEEeCCCCCHHHHHHHHH
Confidence 5444333468889999999997432 256788999999999888884 44444 35559999997544567888999
Q ss_pred HhcCeEEeCCCCcCCCCCCeEEEEeecCHH---HHHHHHHHHHhhC
Q 013521 399 EKTHILTIPGSGFGPGGNEHIRVSAFGHRE---YISEACRRLKNFL 441 (441)
Q Consensus 399 ~~~gi~v~pg~~f~~~~~~~iRls~~~~~~---~~~~~l~~l~~~l 441 (441)
+++||.++||+.|. ..++|+||+++.+.+ +.+.+++.|++.+
T Consensus 301 ~~~gV~v~~~~~f~-~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 301 RNYGIITITAVGMP-GASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HhCCEEEeCCcccC-CCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 99999999999884 346799999987665 7899999998753
No 110
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=4.6e-32 Score=263.50 Aligned_cols=331 Identities=18% Similarity=0.168 Sum_probs=232.3
Q ss_pred CCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCCCCC----CCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcH
Q 013521 71 DARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGYKGY----GAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQ 145 (441)
Q Consensus 71 ~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~~~Y----~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~ 145 (441)
+++++||+.|+| +.+.++.+.+++.+.++++.. ....| +......++++++++++ + .+++|++++|++
T Consensus 15 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~----~-~~~~i~~~~G~~ 87 (360)
T TIGR00858 15 GRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGA--GSTASRLVSGNSPLHEELEEELAEWK----G-TEAALLFSSGYL 87 (360)
T ss_pred CceEEecccCCcccCCCCHHHHHHHHHHHHhcCC--CCCCcCcccCCcHHHHHHHHHHHHHh----C-CCCEEEECchHH
Confidence 567999999965 345678999999999876542 22222 22234566888888876 4 367899999977
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCC--CCccEEEEcCC
Q 013521 146 SDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTT--SRTDIIFFCSP 223 (441)
Q Consensus 146 ~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~--~~~~~v~i~~p 223 (441)
+.+.++..++++||.|+++.|+|+.+...+...| .+++.++..+.+.+...+... .+++++++.++
T Consensus 88 ~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g------------~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~ 155 (360)
T TIGR00858 88 ANVGVISALVGKGDLILSDALNHASLIDGCRLSG------------ARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGV 155 (360)
T ss_pred HHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcC------------CceEEecCCCHHHHHHHHHHcccCCCeEEEEeCC
Confidence 7666677778999999999999999988888877 466666542111111111111 35678887799
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC--CcceeEEEecCCcccCCccceeEEEEee
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~--~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
+||||...+ +++|.++|+++|++||+||+|..+.++....+.....+ ..+++|+++||||++|.+| ||++++
T Consensus 156 ~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~ 229 (360)
T TIGR00858 156 FSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS 229 (360)
T ss_pred ccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence 999999888 88999999999999999999987655432222222211 1367899999999998766 999988
Q ss_pred ccccccCCchhHHHHHHHHh-hh-cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCce
Q 013521 302 EELRYSNGYPVIKDFNRIVC-TC-FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAP 379 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 379 (441)
++++ +.+..... .. ..+.+...+.++.++++. ..+.+.++++++++++.+.+.|+++++++.+ +.++
T Consensus 230 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~al~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~ 298 (360)
T TIGR00858 230 QALI--------DYLINRARTLIFSTALPPAVAAAALAALEL--IQEEPWRREKLLALIARLRAGLEALGFTLMP-SCTP 298 (360)
T ss_pred HHHH--------HHHHHhCccceecCCCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHHcCCccCC-CCCC
Confidence 7763 44432221 11 122344544555566642 1223567899999999999999988877664 5788
Q ss_pred EEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCC-CCCCeEEEEee--cCHHHHHHHHHHHH
Q 013521 380 YVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFGP-GGNEHIRVSAF--GHREYISEACRRLK 438 (441)
Q Consensus 380 ~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~~iRls~~--~~~~~~~~~l~~l~ 438 (441)
++|+.++. .++.++.+++++ +||.+.++..|.. .+.+++|+++. .+++++++++++|+
T Consensus 299 ~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 299 IVPVIIGDNASALALAEELQQ-QGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred EEEEEeCCHHHHHHHHHHHHH-CCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 99999874 235567777665 5999999776642 34578999985 48999999999874
No 111
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=2.6e-31 Score=261.67 Aligned_cols=336 Identities=18% Similarity=0.195 Sum_probs=229.4
Q ss_pred CCCeEEeCCCC-CCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH
Q 013521 71 DARLIRLGIGD-TTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 71 ~~~~i~l~~g~-~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~ 149 (441)
++++++|+.|+ ++++.++.+.+++.+.+.... .....|....|..++++++++++.+.++.+ ++|++|+| ++++.
T Consensus 41 g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~--~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~ 116 (397)
T PRK06939 41 GKEVINFCANNYLGLANHPELIAAAKAALDSHG--FGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANG 116 (397)
T ss_pred CCeEEEeeccCccccCCCHHHHHHHHHHHHHcC--CCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHH
Confidence 56799999998 678888999999999887632 122233335688899999998888755654 78999999 45555
Q ss_pred H-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC----CCCccEEEEcCCC
Q 013521 150 R-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST----TSRTDIIFFCSPN 224 (441)
Q Consensus 150 ~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~----~~~~~~v~i~~p~ 224 (441)
. +..++++||.|++++|+|+++...+...+ .+++.++..+...+...+.. ..++++|++.+.+
T Consensus 117 ~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~------------~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~ 184 (397)
T PRK06939 117 GLFETLLGKEDAIISDALNHASIIDGVRLCK------------AKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVF 184 (397)
T ss_pred HHHHHhCCCCCEEEEEhhhhHHHHHHHHhcC------------CceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCc
Confidence 4 67788999999999999999988888887 35566554211111111111 1266777765679
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC-CcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG-AREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
||||...+ +++|+++|++||++||+||+|..........+.....+ .++.+++++||||+++ |+|+||++++++
T Consensus 185 ~~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~ 259 (397)
T PRK06939 185 SMDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKE 259 (397)
T ss_pred CCCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHH
Confidence 99998665 89999999999999999999963222211111111111 2345699999999994 569999999987
Q ss_pred ccccCCchhHHHHHHHHh-hhcC-CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEE
Q 013521 304 LRYSNGYPVIKDFNRIVC-TCFN-GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYV 381 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 381 (441)
++ +.+..... .... ..++..+.++.++++.. ...++++++++++++.+.+.|++++++..++ .+.++
T Consensus 260 ~~--------~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~ 328 (397)
T PRK06939 260 VI--------DWLRQRSRPYLFSNSLAPAIVAASIKVLELL--EESDELRDRLWENARYFREGMTAAGFTLGPG-EHPII 328 (397)
T ss_pred HH--------HHHHHhCccccccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCEE
Confidence 73 44443221 1111 12333344444444311 1125678899999999999999888776554 34455
Q ss_pred EEEcCC-CChHHHHHHHHHhcCeEEeCCCCcC--CCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 382 WVQFPG-SSSWDVFAEILEKTHILTIPGSGFG--PGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 382 ~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~--~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
++.++. .++.++++.++++ ||.+.++. |. +.+.++||+++ +.+++++++++++|+++
T Consensus 329 ~~~~~~~~~~~~~~~~L~~~-gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~ 390 (397)
T PRK06939 329 PVMLGDAKLAQEFADRLLEE-GVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKV 390 (397)
T ss_pred EEEECCHHHHHHHHHHHHHC-CceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 555542 2456788888776 99999654 43 23357899987 45899999999999875
No 112
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=5.1e-31 Score=262.55 Aligned_cols=338 Identities=14% Similarity=0.157 Sum_probs=249.6
Q ss_pred CCCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCC--CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKG--YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.+++++||+.+++ ++..++.+.+++.+++++++.... ...|++..+..+|+++||+++ + .++.|++++|.+.
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~----~-~~~~i~~s~G~~a 181 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL----G-TPDSILYSYGLST 181 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh----C-CCCEEEECCHHHH
Confidence 3567999999874 677899999999999998653111 124777888999999999997 4 4578999999886
Q ss_pred HHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-------CCCc-cEE
Q 013521 147 DISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-------TSRT-DII 218 (441)
Q Consensus 147 al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-------~~~~-~~v 218 (441)
...++.+++++||.|++....|..+.......+ .+++.++.++.+++...+++ .+++ ++|
T Consensus 182 ~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~------------~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~I 249 (481)
T PLN02822 182 IFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSR------------STIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYI 249 (481)
T ss_pred HHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcC------------CeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEE
Confidence 545578889999999998888888777777776 47888887654444333321 1334 677
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCC--cceeEEEecCCcccCCccceeE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGA--REVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~--~~~~i~i~S~SK~~~~~G~r~G 296 (441)
++..++|+||.+.+ +++|+++|++||+++|+||+|+...++.....+....+. .+.+|+++||||.+|++| |
T Consensus 250 vve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G 323 (481)
T PLN02822 250 VVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---G 323 (481)
T ss_pred EEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---e
Confidence 77788999999999 899999999999999999999966655333333322111 245699999999999888 9
Q ss_pred EEEeeccccccCCchhHHHHHHHHhhhcCC--CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee
Q 013521 297 WTVVPEELRYSNGYPVIKDFNRIVCTCFNG--ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVN 373 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 373 (441)
|++++++++ +.+.........+ .+++.+.++.++++. .+...+++++++++++++.+.|++. |+.+.
T Consensus 324 ~i~g~~~ii--------~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~--l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 393 (481)
T PLN02822 324 FCTGSARVV--------DHQRLSSSGYVFSASLPPYLASAAITAIDV--LEDNPSVLAKLKENIALLHKGLSDIPGLSIG 393 (481)
T ss_pred EEEcCHHHH--------HHHHhcCCceeeccccCHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 999988874 3333222222222 346677777777752 1222567889999999999999987 88887
Q ss_pred CCCCceEEEEEcCCC------C---hHHHHHHHHHhcCeEEeCC--CCcCCC-CCCeEEEEee--cCHHHHHHHHHHHHh
Q 013521 374 GGKNAPYVWVQFPGS------S---SWDVFAEILEKTHILTIPG--SGFGPG-GNEHIRVSAF--GHREYISEACRRLKN 439 (441)
Q Consensus 374 ~~~~~~~~~~~~~~~------~---~~~~~~~ll~~~gi~v~pg--~~f~~~-~~~~iRls~~--~~~~~~~~~l~~l~~ 439 (441)
.+.+++++++.+++. + ..+++.++++++||.+.|+ ..|+.. .+.++|+++. .++++|++++++|++
T Consensus 394 ~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~ 473 (481)
T PLN02822 394 SNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKR 473 (481)
T ss_pred CCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 667899999999632 1 2467888887779999987 334321 2467999864 589999999999987
Q ss_pred h
Q 013521 440 F 440 (441)
Q Consensus 440 ~ 440 (441)
+
T Consensus 474 ~ 474 (481)
T PLN02822 474 V 474 (481)
T ss_pred H
Confidence 5
No 113
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-30 Score=235.27 Aligned_cols=331 Identities=22% Similarity=0.308 Sum_probs=245.8
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHHHHHHHhc--CCCCEE
Q 013521 86 IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDISRLQMLL--GSNVTV 161 (441)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al~~l~~l~--~~gd~V 161 (441)
+|..+++...+.+...+ .....|..++|.+-+|+.+|+|+.+ +...+|++|++|.|++.|+..++.++ ++.+.|
T Consensus 87 fp~Dai~RA~~~L~~~g--Gs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~Gv 164 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCG--GSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGV 164 (475)
T ss_pred CCHHHHHHHHHHHHhcC--CcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCce
Confidence 55666666666666544 4677899999999999999999976 66678999999999999999855443 677899
Q ss_pred EEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC----------CCCccEEEEcCCCCccccCC
Q 013521 162 AVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST----------TSRTDIIFFCSPNNPTGHAA 231 (441)
Q Consensus 162 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~----------~~~~~~v~i~~p~NPtG~~~ 231 (441)
+++-|.||-|...+..+| ...+...++++.+|..|... .-++++++++||.||||+++
T Consensus 165 liPiPQYPLYsAti~l~~------------~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvl 232 (475)
T KOG0258|consen 165 LIPIPQYPLYSATISLLG------------GTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVL 232 (475)
T ss_pred EeecCCCchhHHHHHHhC------------CcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhh
Confidence 999999999999999999 47888889999999887432 24788999999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCC--CCCccc----ccCC-Ccce--eEEEecCCccc-CCccceeEEEEee
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAYITDP--SPRSIY----EIPG-AREV--AIEISSFSKFA-GFTGVRLGWTVVP 301 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~--~~~~~~----~~~~-~~~~--~i~i~S~SK~~-~~~G~r~G~l~~~ 301 (441)
|++.+++|+.+|.+++++++.||+|.+..+.. ..+|+. ++.. .+++ ++.+.|.||.+ |=.|.|-||+-.-
T Consensus 233 s~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~ 312 (475)
T KOG0258|consen 233 SEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESL 312 (475)
T ss_pred cHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecc
Confidence 99999999999999999999999999988764 344443 2221 1222 46788889965 3389999998642
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC-----CCcH----HHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLS-----PDGF----QALRTVIDYYKENAKIIVDAFQSL-GLK 371 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~-----~~~~----~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 371 (441)
+- .++...++....+.. .+++...|...-.... +..+ ...+...+.++++.+.+.+.+++. |+.
T Consensus 313 n~-----~prv~~qi~Kl~si~-lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~ 386 (475)
T KOG0258|consen 313 NR-----DPRVKQQIKKLASIK-LCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGIS 386 (475)
T ss_pred cC-----ChhHHHHHHHHHhhh-hcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCcee
Confidence 21 112233343333322 2345556665444443 1112 334667778888999999999998 999
Q ss_pred eeCCCCceEEEEEcC--C----------C-ChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEeecCHHHHHHHHHHH
Q 013521 372 VNGGKNAPYVWVQFP--G----------S-SSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSAFGHREYISEACRRL 437 (441)
Q Consensus 372 ~~~~~~~~~~~~~~~--~----------~-~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~~~~~~~~~~~l~~l 437 (441)
+.++++++|++-++. . . .+.=.+.+||+..||++.||+.|+ ..|.-++|.++-... + +.++++
T Consensus 387 cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~ 463 (475)
T KOG0258|consen 387 CNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKF 463 (475)
T ss_pred eccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHH
Confidence 999999999987663 1 1 222246889999999999999998 456778999974433 3 566665
Q ss_pred Hh
Q 013521 438 KN 439 (441)
Q Consensus 438 ~~ 439 (441)
++
T Consensus 464 ~~ 465 (475)
T KOG0258|consen 464 KK 465 (475)
T ss_pred HH
Confidence 54
No 114
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=1.8e-30 Score=254.62 Aligned_cols=336 Identities=16% Similarity=0.191 Sum_probs=235.4
Q ss_pred CCCeEEeCCCC-CCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH
Q 013521 71 DARLIRLGIGD-TTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 71 ~~~~i~l~~g~-~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~ 149 (441)
+++++||+.++ +++++++.+.+++.+.+.+.. .....|....|..++++++++++.+..+. ++.|++++|+++.+.
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG~~a~~~ 108 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAIQQYG--VGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSGFNTNQG 108 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcC--CCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHHHHHHH
Confidence 46799999987 577788999999999887542 23446777789999999999999875564 468999999766555
Q ss_pred HHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCcc
Q 013521 150 RLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPT 227 (441)
Q Consensus 150 ~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPt 227 (441)
++..++++||.|+++.|+|+.+...+...| .+++.++..+...+...+.. .++++++++++++|||
T Consensus 109 a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g------------~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~t 176 (385)
T TIGR01825 109 VLSALLRKGDIVLSDELNHASIIDGLRLTK------------ATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMD 176 (385)
T ss_pred HHHHhCCCCCEEEEEccccHHHHHHHHhcC------------CceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCC
Confidence 577788999999999999999887777666 34444432111111111111 1367888777889999
Q ss_pred ccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC-cccccCCCcceeEEEecCCcccCCccceeEEEEeeccccc
Q 013521 228 GHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR-SIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRY 306 (441)
Q Consensus 228 G~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~ 306 (441)
|.+++ +++|.++|++||+++|+||+|+.+.++.... ....++-.++++++++||||.+|++| ||++++++++
T Consensus 177 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~- 249 (385)
T TIGR01825 177 GDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELI- 249 (385)
T ss_pred CCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHH-
Confidence 99998 7889999999999999999998765542111 11112112567899999999998666 9999887763
Q ss_pred cCCchhHHHHHHHHh-hhcC-CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEE
Q 013521 307 SNGYPVIKDFNRIVC-TCFN-GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQ 384 (441)
Q Consensus 307 ~~~~~~~~~~~~~~~-~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 384 (441)
+.+..... .... ..+++.+.++.++++... + ..+..++++++++++.+.|++.|+++..+ .+.++++.
T Consensus 250 -------~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~ 319 (385)
T TIGR01825 250 -------EYLKNRARPFLFSTAQPPAVVAALAAAVDELQ-R-SPELMERLWDNTRFFKAGLGKLGYDTGGS-ETPITPVV 319 (385)
T ss_pred -------HHHHHhCccccccCCCCHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHcCCCCCCC-CCCEEEEE
Confidence 44433221 1111 234566666666664211 1 13456777888999999999888887654 44566666
Q ss_pred cCC-CChHHHHHHHHHhcCeEEeCCCCcC--CCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 385 FPG-SSSWDVFAEILEKTHILTIPGSGFG--PGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 385 ~~~-~~~~~~~~~ll~~~gi~v~pg~~f~--~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
++. .+..++++.++++ ||.+. +..|. +.+..+||++. ..+++++++++++|+++
T Consensus 320 ~~~~~~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 320 IGDEKAAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKV 378 (385)
T ss_pred ECCHHHHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 653 2345777888777 99985 44443 33457899985 56899999999999875
No 115
>PLN02483 serine palmitoyltransferase
Probab=99.98 E-value=3.1e-30 Score=257.40 Aligned_cols=335 Identities=17% Similarity=0.207 Sum_probs=235.5
Q ss_pred CCCeEEeCCCCC-CCC-CcHHHHHHHHHHHhhccCC--CCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 71 DARLIRLGIGDT-TQP-IPDIITSAMAEHAFALSTV--KGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 71 ~~~~i~l~~g~~-~~~-~~~~~~~al~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
+.+.+||++.++ ++. .++...+++.+++.+++.. .....|++..+..++++++|+++ + .++.|++++|...
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~----g-~~~ai~~~~G~~a 173 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFV----G-KPAAIVFGMGYAT 173 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHh----C-CCcEEEECCHHHH
Confidence 356899998885 454 3455666777777776532 22334887889999999999997 5 4678999998777
Q ss_pred HHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCC-----cc
Q 013521 147 DISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSR-----TD 216 (441)
Q Consensus 147 al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~-----~~ 216 (441)
.+.++..++++||.|++++|+|+++...++..| ++++.++.++...+...+.. .++ .+
T Consensus 174 n~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~G------------a~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k 241 (489)
T PLN02483 174 NSTIIPALIGKGGLIISDSLNHNSIVNGARGSG------------ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
T ss_pred HHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcC------------CeEEEEeCCCHHHHHHHHHhhhhccccccccCCce
Confidence 776678889999999999999999999998888 58888886532222111110 122 36
Q ss_pred EEEEcCC-CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC---cccccCCCcceeEEEecCCcccCCcc
Q 013521 217 IIFFCSP-NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR---SIYEIPGAREVAIEISSFSKFAGFTG 292 (441)
Q Consensus 217 ~v~i~~p-~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~~~~G 292 (441)
+++++++ .|++|.+.+ +++|+++|++||+++|+||+|+....+.... +....+ ..+++|+++||||.+|++|
T Consensus 242 ~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~-~~~~dI~~~SfSKs~g~~G 317 (489)
T PLN02483 242 IIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVD-PADVDIMMGTFTKSFGSCG 317 (489)
T ss_pred EEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCC-cccCcEEEEecchhcccCc
Confidence 6666655 799999988 8999999999999999999998433322222 222221 2356799999999999777
Q ss_pred ceeEEEEeeccccccCCchhHHHHHHHHhh---hcCCCcHHHHHHHHHhcC----CCcHHHHHHHHHHHHHHHHHHHHHH
Q 013521 293 VRLGWTVVPEELRYSNGYPVIKDFNRIVCT---CFNGASNIVQAGGLACLS----PDGFQALRTVIDYYKENAKIIVDAF 365 (441)
Q Consensus 293 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~~~~~l~~~L 365 (441)
||++++++++ +.+...... .....+...| ++.+.++ +.+..+..+++++++++++++.+.|
T Consensus 318 ---G~i~~~~~li--------~~l~~~~~~~~~~~~~~p~~~~-~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L 385 (489)
T PLN02483 318 ---GYIAGSKELI--------QYLKRTCPAHLYATSMSPPAVQ-QVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSEL 385 (489)
T ss_pred ---eEEEcCHHHH--------HHHHHhCccccccCCcCHHHHH-HHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHH
Confidence 9999988873 455433221 1111223333 3444442 2222334556789999999999999
Q ss_pred HhCCCeeeCCCCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcC--CCCCCeEEEEee--cCHHHHHHHHHHHHhh
Q 013521 366 QSLGLKVNGGKNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFG--PGGNEHIRVSAF--GHREYISEACRRLKNF 440 (441)
Q Consensus 366 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~--~~~~~~iRls~~--~~~~~~~~~l~~l~~~ 440 (441)
+++|+.+..+.+++.+|+.+.. ....++.++++++ ||.+.| ..|. +...+.+|+++. .+++++++++++|.++
T Consensus 386 ~~~G~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~-GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~ 463 (489)
T PLN02483 386 QKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQ-NVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEV 463 (489)
T ss_pred HHCCCcccCCCCCCEEEEEECCHHHHHHHHHHHHHC-CcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9998887766677788877642 2345677787765 999997 4442 334578999974 5899999999999875
No 116
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.98 E-value=3.3e-30 Score=253.34 Aligned_cols=329 Identities=16% Similarity=0.204 Sum_probs=226.0
Q ss_pred CCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCc---Cc----HHHHHHHHHHHhhhCCCCCCcEEEcC
Q 013521 71 DARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQ---GN----MALRTAIADKFYKDMGIEGDEIFISD 142 (441)
Q Consensus 71 ~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~l~~~~~~~~~~I~~t~ 142 (441)
+.++|+|+.|++ +++.++.+.+++.+++.+.+. +|++.. |. .++++++|+++ +. +++++++
T Consensus 37 g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~-----~~~~s~~~~G~~~~~~~le~~ia~~~----g~--~~~ii~~ 105 (393)
T TIGR01822 37 GREVLNFCANNYLGLSSHPDLIQAAKDALDEHGF-----GMSSVRFICGTQDIHKELEAKIAAFL----GT--EDTILYA 105 (393)
T ss_pred CceEEEeeCCCccccCCCHHHHHHHHHHHHHhCC-----CCCCcCcccCChHHHHHHHHHHHHHh----CC--CcEEEEC
Confidence 457999999995 788889999999999986431 333333 65 88999999987 43 5677778
Q ss_pred CcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC----CCCccE
Q 013521 143 GAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST----TSRTDI 217 (441)
Q Consensus 143 G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~----~~~~~~ 217 (441)
|+++++.. +..++++||.|+++.|+|+++...+...+. +.+.++..+.+.+...+.. ..++++
T Consensus 106 ~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~------------~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 173 (393)
T TIGR01822 106 SCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKA------------KRYRYANNDMADLEAQLKEARAAGARHRL 173 (393)
T ss_pred chHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCC------------ceEEeCCCCHHHHHHHHHhhhhcCCCceE
Confidence 88888887 567889999999999999999888877763 2322221110111111111 126778
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC-CcceeEEEecCCcccCCccceeE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG-AREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
|++.+++||||.+.+ +++|+++|++||+++|+||+|+.........+.....+ .++.+++++|+||.++ |+|+|
T Consensus 174 v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~--g~r~G 248 (393)
T TIGR01822 174 IATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG--GASGG 248 (393)
T ss_pred EEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh--CCCcE
Confidence 887788999999988 88999999999999999999963222222222222211 1245699999999874 78999
Q ss_pred EEEeeccccccCCchhHHHHHHHH-hhhcC-CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 013521 297 WTVVPEELRYSNGYPVIKDFNRIV-CTCFN-GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNG 374 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 374 (441)
|++++++++ +.+.... ..... +.++..+.++.++++. .+..++++++++++++++.+.|++.|+.+.+
T Consensus 249 ~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~a~~~al~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 318 (393)
T TIGR01822 249 FTTARKEVV--------ELLRQRSRPYLFSNSLPPAVVGASIKVLEM--LEASNELRDRLWANTRYFRERMEAAGFDIKP 318 (393)
T ss_pred EEEeCHHHH--------HHHHHhCccceecCCCCHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 999988773 4443321 11122 2234444455555531 1224677889999999999999888887654
Q ss_pred CCCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcC--CCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 375 GKNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFG--PGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 375 ~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~--~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
+ .+.++++.+++ ....++...|+++ ||.+. +..|. +.+..++|+++ +.+++++++++++|+++
T Consensus 319 ~-~~~~~~i~~~~~~~~~~l~~~L~~~-gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~ 386 (393)
T TIGR01822 319 A-DHPIIPVMLYDAVLAQRFARRLLEE-GIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRI 386 (393)
T ss_pred C-CCCEEEEEeCCHHHHHHHHHHHHHC-CeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3 45566666553 3456777777766 99998 55453 22345799886 45899999999999875
No 117
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.98 E-value=3.1e-30 Score=253.73 Aligned_cols=335 Identities=16% Similarity=0.132 Sum_probs=226.8
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC----CCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCcHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYG----AEQGNMALRTAIADKFYKDMGI-EGDEIFISDGAQSD 147 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~~~a 147 (441)
+.+.|+.+... +.|+.+.+++.+.+...........|. -.....++|+.+|+++ +. ++++|++|+|++++
T Consensus 16 ~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~~i~~t~g~t~~ 90 (398)
T TIGR03392 16 GTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL----NAPDAENIVWTRGTTES 90 (398)
T ss_pred CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCCCCCeEEEeCChHHH
Confidence 47889888765 467889999998876432111111111 0123466888999886 77 47899999999999
Q ss_pred HHH-HHHh----cCCCCEEEEeCCCchhh----HhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCc
Q 013521 148 ISR-LQML----LGSNVTVAVQDPSFPAY----IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRT 215 (441)
Q Consensus 148 l~~-l~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~ 215 (441)
+++ +..+ +++||+|++++|+|++. ...++..| .+++.++.+.+..++++ +++ .+++
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~~l~~~i~~~t 158 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTG------------AKVVKLPIGADLLPDIRQLPELLTPRT 158 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcC------------cEEEEEecCCCCCcCHHHHHHHhccCc
Confidence 998 4554 47999999999999773 34445556 58889988654322221 222 3679
Q ss_pred cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcccee
Q 013521 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRL 295 (441)
Q Consensus 216 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~ 295 (441)
+++++++|+||||.+++ +++|+++|+++|+++|+|++|+.... +..+... +..+++.|++|.+|.+| +
T Consensus 159 ~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~---~~~~~~~----~~d~~~~s~~K~~gp~G--~ 226 (398)
T TIGR03392 159 RILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG---PPDVQAL----DIDFYAFSGHKLYGPTG--I 226 (398)
T ss_pred eEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC---CCChhhc----CCCEEEEecccccCCCc--e
Confidence 99999999999999999 77899999999999999999974322 2223222 23488899999988555 9
Q ss_pred EEEEeeccccccCCchhHH-H---------HH---HHHhhhcCCCcH---HHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Q 013521 296 GWTVVPEELRYSNGYPVIK-D---------FN---RIVCTCFNGASN---IVQAGGLACLSPDGFQALRTVIDYYKENAK 359 (441)
Q Consensus 296 G~l~~~~~~~~~~~~~~~~-~---------~~---~~~~~~~~~~~~---~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 359 (441)
||++++++++..-.+.... . +. ........+.+. .+..+++..+.+.+ .++..++.++.++
T Consensus 227 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g---~~~i~~~~~~l~~ 303 (398)
T TIGR03392 227 GVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDID---IAAAEAWSVSLAD 303 (398)
T ss_pred EEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhC---HHHHHHHHHHHHH
Confidence 9999988764221000000 0 00 000011112333 33444444443333 3566777888889
Q ss_pred HHHHHHHhC-CCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCC------CCCCeEEEEe--ecCHHHH
Q 013521 360 IIVDAFQSL-GLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGP------GGNEHIRVSA--FGHREYI 430 (441)
Q Consensus 360 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~~iRls~--~~~~~~~ 430 (441)
.+.+.|+++ |+....++.+.++++.+++....++...| +++||.+++|..+.. ..+++||+|+ +++++|+
T Consensus 304 ~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 304 LAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV 382 (398)
T ss_pred HHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence 999999887 78776555667788888765666777665 456999999986632 1257999996 5689999
Q ss_pred HHHHHHHHhh
Q 013521 431 SEACRRLKNF 440 (441)
Q Consensus 431 ~~~l~~l~~~ 440 (441)
+++++.|+++
T Consensus 383 ~~l~~~l~~~ 392 (398)
T TIGR03392 383 DALVDAVGAA 392 (398)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 118
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.98 E-value=6.8e-30 Score=250.55 Aligned_cols=333 Identities=16% Similarity=0.146 Sum_probs=224.0
Q ss_pred CCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcC----cHHHHHHHHHHHhhhCCCCCCcEEEcCCcH
Q 013521 71 DARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQG----NMALRTAIADKFYKDMGIEGDEIFISDGAQ 145 (441)
Q Consensus 71 ~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~ 145 (441)
++++|||+.+++ ++.+++.+.+++.+.+..+.. ....|....| ..++++.+++++ + .++.|++++|+.
T Consensus 38 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~----~-~~~~i~~~~g~~ 110 (385)
T PRK05958 38 GRRMLNFASNDYLGLARHPRLIAAAQQAARRYGA--GSGGSRLVTGNSPAHEALEEELAEWF----G-AERALLFSSGYA 110 (385)
T ss_pred CceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCC--CCCCcCcccCCcHHHHHHHHHHHHHh----C-CCcEEEECcHHH
Confidence 567999999875 455678899999999976431 1222322233 455555566554 5 356777777766
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCC-CccEEEEcCCC
Q 013521 146 SDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTS-RTDIIFFCSPN 224 (441)
Q Consensus 146 ~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~-~~~~v~i~~p~ 224 (441)
..+.++..++++||.|+++.|+|+.+...+...| .+++.++..+.+.+...+...+ ++.++++.+++
T Consensus 111 ~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g------------~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~ 178 (385)
T PRK05958 111 ANLAVLTALAGKGDLIVSDKLNHASLIDGARLSR------------ARVRRYPHNDVDALEALLAKWRAGRALIVTESVF 178 (385)
T ss_pred HHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcC------------CceEEeCCCCHHHHHHHHHhccCCCeEEEEEecc
Confidence 5555567778999999999999999988887777 4666666532111111111111 34455544779
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC---cccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR---SIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
||||...+ +++|+++|++||+++|+||+|+.+.++.... ....++ ..+++|+++|+||.+|.+| ||++++
T Consensus 179 ~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G---g~~~~~ 251 (385)
T PRK05958 179 SMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLA-GEPDVILVGTLGKALGSSG---AAVLGS 251 (385)
T ss_pred cCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCC-CCCceEEEEechhhcccCC---cEEEcC
Confidence 99999888 8899999999999999999998654432111 111232 2356799999999998766 999988
Q ss_pred ccccccCCchhHHHHHHHH-hhh-cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCce
Q 013521 302 EELRYSNGYPVIKDFNRIV-CTC-FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAP 379 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 379 (441)
+++ .+.+.... ... ..+.+++.+.++.++++.... ...++++++++++.+.+.|++.++++.+ +.+.
T Consensus 252 ~~~--------~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~ 320 (385)
T PRK05958 252 ETL--------IDYLINRARPFIFTTALPPAQAAAARAALRILRR--EPERRERLAALIARLRAGLRALGFQLMD-SQSA 320 (385)
T ss_pred HHH--------HHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCcCC-CCCC
Confidence 766 33333221 111 122444544455555542111 1466788999999999999988887665 4677
Q ss_pred EEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEee--cCHHHHHHHHHHHHhhC
Q 013521 380 YVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSAF--GHREYISEACRRLKNFL 441 (441)
Q Consensus 380 ~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~~--~~~~~~~~~l~~l~~~l 441 (441)
++|+.++. .++.++.+.+.+ +||.+.++..+. +.+.+++|+++. .+++++++++++|++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 321 IQPLIVGDNERALALAAALQE-QGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred EEEEEeCCHHHHHHHHHHHHH-CCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 88998874 244567777765 599999865443 334579999985 58999999999999875
No 119
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=4e-30 Score=247.02 Aligned_cols=312 Identities=18% Similarity=0.177 Sum_probs=212.0
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HH
Q 013521 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQ 152 (441)
Q Consensus 74 ~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~ 152 (441)
+|+|+++.++. +++.+++++.+.. .....|+++....+|+++||+++ |+++. ++++|+++++.+ +.
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~------~~~~~Y~~~~~~~~L~~~la~~~----g~~~~--~v~~~g~~a~~~~l~ 67 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAP------VGDDVYGDDPTVNALQDYAAELS----GKEAA--LFLPTGTQANLVALL 67 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhcc------CCCcccCCCHHHHHHHHHHHHHh----CCCeE--EEeCchHHHHHHHHH
Confidence 47899998877 7788888887643 34457888889999999999996 66443 566666666655 66
Q ss_pred HhcCCCCEEEEeCCCchhhHhH--HHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CC------CccEEE
Q 013521 153 MLLGSNVTVAVQDPSFPAYIDT--SVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TS------RTDIIF 219 (441)
Q Consensus 153 ~l~~~gd~Vlv~~p~y~~~~~~--~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~------~~~~v~ 219 (441)
.++++||+|+++.|+|...... ....+. .+++.++.+. ++..|+++ .+ ++++|+
T Consensus 68 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~ 134 (333)
T PRK10534 68 SHCERGEEYIVGQAAHNYLYEAGGAAVLGS-----------IQPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLS 134 (333)
T ss_pred HhcCCCCeeEEechhhhhHhcCCchHHhcC-----------ceEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEE
Confidence 6789999999998888542221 223331 2566666643 33444322 12 588999
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeE-EE
Q 013521 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLG-WT 298 (441)
Q Consensus 220 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G-~l 298 (441)
+|||+ ||.+++.+++++|+++|++|++++++||+|..........+...+....+++ +.||||.+|++ +| |+
T Consensus 135 l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~--~~s~SK~~~~~---~G~~~ 207 (333)
T PRK10534 135 LENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSF--TICLSKGLGTP---VGSLL 207 (333)
T ss_pred EecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEE--EEEeEcCCCCc---ccceE
Confidence 99766 5999999999999999999999999999987322110011222222222332 34899998754 68 68
Q ss_pred EeeccccccCCchhHHHHHHHHhhhcCC--CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013521 299 VVPEELRYSNGYPVIKDFNRIVCTCFNG--ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGK 376 (441)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 376 (441)
++++++ ++.+..++.....+ .+.+.|.++.+.+++ .....+...++++++.+.|+++|+++.++
T Consensus 208 ~~~~~~--------i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~r~~l~~~L~~~g~~~~~~- 273 (333)
T PRK10534 208 VGNRDY--------IKRARRWRKMTGGGMRQAGILAAAGLYALKH-----NVARLQEDHDNAAWLAEQLREAGADVMRQ- 273 (333)
T ss_pred EcCHHH--------HHHHHHHHHHhCCchhhHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhCCCccCCC-
Confidence 888877 45565554432211 233556666666642 12233334456789999999999988765
Q ss_pred CceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee--cCHHHHHHHHHHHHhhC
Q 013521 377 NAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF--GHREYISEACRRLKNFL 441 (441)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~~~~~~l~~l~~~l 441 (441)
+++|+|+++++....++ .++++++||.++|+. ++|++.+ .+++++++++++|++++
T Consensus 274 ~~nfv~~~~~~~~~~~~-~~~l~~~gi~v~~~~--------~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 274 DTNMLFVRVGEEQAAAL-GEYMRERNVLINASP--------IVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred CceEEEEECCchhHHHH-HHHHHHcCeeecCCc--------eEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 79999999974334455 556667799998863 5888863 58999999999998764
No 120
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=2.4e-29 Score=247.69 Aligned_cols=335 Identities=17% Similarity=0.160 Sum_probs=227.0
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC----CCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCcHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYG----AEQGNMALRTAIADKFYKDMGI-EGDEIFISDGAQSD 147 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~~~a 147 (441)
+.+.|+.+..+ +.|..+.+++.+.+.+.........+. ......++|+.+|+++ ++ ++++|++|+|++++
T Consensus 19 ~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~~i~~~~~~t~~ 93 (401)
T PRK10874 19 AGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL----NAPDAKNIVWTRGTTES 93 (401)
T ss_pred ceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc----CCCCCCEEEEECCHHHH
Confidence 47888888765 467889999999887542111111110 0223567888888875 77 78999999999999
Q ss_pred HHH-HHHh----cCCCCEEEEeCCCchhh----HhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCc
Q 013521 148 ISR-LQML----LGSNVTVAVQDPSFPAY----IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRT 215 (441)
Q Consensus 148 l~~-l~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~ 215 (441)
+++ +..+ +++||+|++.+|+|++. ...++..| .+++.++.+.+..++++ +++ .+++
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g------------~~v~~v~~~~~~~~d~~~l~~~i~~~t 161 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTG------------AKVVKLPLGADRLPDVDLLPELITPRT 161 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhC------------CEEEEEecCCCCcCCHHHHHHhcCcCc
Confidence 998 4454 47999999999999763 34445556 48888888653222211 222 3789
Q ss_pred cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcccee
Q 013521 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRL 295 (441)
Q Consensus 216 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~ 295 (441)
+++++++|+||||.+++ +++|+++|+++|+++|+|++|+.... +..+..+ +..+++.|++|.+|.+| +
T Consensus 162 ~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~---~~~~~~~----~~d~~~~s~~K~~gp~G--~ 229 (401)
T PRK10874 162 RILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF---PADVQAL----DIDFYAFSGHKLYGPTG--I 229 (401)
T ss_pred EEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc---cCCchhc----CCCEEEEecccccCCCc--c
Confidence 99999999999999999 78999999999999999999973222 2233222 34588999999988666 6
Q ss_pred EEEEeeccccccCCchhH--H-----H---HH---HHHhhhcCCCcHHHHHHHHHhc---CCCcHHHHHHHHHHHHHHHH
Q 013521 296 GWTVVPEELRYSNGYPVI--K-----D---FN---RIVCTCFNGASNIVQAGGLACL---SPDGFQALRTVIDYYKENAK 359 (441)
Q Consensus 296 G~l~~~~~~~~~~~~~~~--~-----~---~~---~~~~~~~~~~~~~~~~a~~~~l---~~~~~~~~~~~~~~~~~~~~ 359 (441)
||++++++.+..-..... . . +. ........+.+...+.++.+++ .+.+ ..+.+++.++.++
T Consensus 230 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g---~~~~~~~~~~l~~ 306 (401)
T PRK10874 230 GVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADID---INQAESWSRSLAT 306 (401)
T ss_pred EEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhC---HHHHHHHHHHHHH
Confidence 999988876422100000 0 0 00 0001111223434444444444 3322 3556777888889
Q ss_pred HHHHHHHhC-CCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCC------CCCCeEEEEe--ecCHHHH
Q 013521 360 IIVDAFQSL-GLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGP------GGNEHIRVSA--FGHREYI 430 (441)
Q Consensus 360 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~~iRls~--~~~~~~~ 430 (441)
++.+.|+++ |++...++.+.++++.+++....++.+.| +++||.+++|..+.. ...++||+|+ +++++++
T Consensus 307 ~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edi 385 (401)
T PRK10874 307 LAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDV 385 (401)
T ss_pred HHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHH
Confidence 999999887 88877656667788888765566666555 556999999986642 2357999997 4589999
Q ss_pred HHHHHHHHhh
Q 013521 431 SEACRRLKNF 440 (441)
Q Consensus 431 ~~~l~~l~~~ 440 (441)
+++++.|+++
T Consensus 386 d~ll~al~~~ 395 (401)
T PRK10874 386 DALVNAVDRA 395 (401)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 121
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=1.3e-29 Score=249.94 Aligned_cols=335 Identities=16% Similarity=0.160 Sum_probs=228.1
Q ss_pred CCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCC-C-CCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKG-Y-KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~-~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al 148 (441)
.+.++|+.+++ ++..++.+.+++.+.+..++...+ . ..|+......+|++.+|+++ +. ++.|++++|+++..
T Consensus 46 ~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g~-~~~i~~~sG~~a~~ 120 (410)
T PRK13392 46 RRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----GK-ESALLFTSGYVSND 120 (410)
T ss_pred ceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----CC-CCEEEECcHHHHHH
Confidence 45788888874 677899999999999987642111 1 12333335678999999986 63 57899999875444
Q ss_pred HHHHHhc--CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCC
Q 013521 149 SRLQMLL--GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPN 224 (441)
Q Consensus 149 ~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~ 224 (441)
.++..+. .+||.|+++.+.|..+...+...| .++..++.+....+...++. .+++++|++++|+
T Consensus 121 ~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g------------~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~ 188 (410)
T PRK13392 121 AALSTLGKLLPGCVILSDALNHASMIEGIRRSG------------AEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVY 188 (410)
T ss_pred HHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcC------------CeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCC
Confidence 4455453 489988888878888777777666 35555543211111111111 2578999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCC-cceeEEEecCCcccCCccceeEEEEeecc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGA-REVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~-~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
||||.+++ +++|.++|++||+++|+||+|....++.....+....+. ++..++++||||.+|++| ||++++++
T Consensus 189 n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~ 262 (410)
T PRK13392 189 SMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASAD 262 (410)
T ss_pred CCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHH
Confidence 99999999 888899999999999999999943333222222221111 122388999999999888 99998877
Q ss_pred ccccCCchhHHHHHHHHhh--hcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEE
Q 013521 304 LRYSNGYPVIKDFNRIVCT--CFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYV 381 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 381 (441)
+ ++.+...... .....+++.+.++.++|+.. +.....++.++++++++.+.|++.|+++.++ .++++
T Consensus 263 ~--------~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~ 331 (410)
T PRK13392 263 L--------IDFVRSFAPGFIFTTALPPAVAAGATAAIRHL--KTSQTERDAHQDRVAALKAKLNANGIPVMPS-PSHIV 331 (410)
T ss_pred H--------HHHHHHhCcchhccCcCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCCCC-CCCEE
Confidence 6 3444433321 12234556777777777632 2224456788899999999999888887654 55666
Q ss_pred EEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 382 WVQFPGS-SSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 382 ~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
.+.++.. ...++.++|++++||.+.++.... +.+..++|+++ ..++++++++++.|+++
T Consensus 332 ~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~ 394 (410)
T PRK13392 332 PVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAI 394 (410)
T ss_pred EEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5555421 234677778777799999875432 23457999997 46899999999999875
No 122
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=5.3e-30 Score=220.22 Aligned_cols=321 Identities=20% Similarity=0.311 Sum_probs=237.9
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
++.++.++-.+.+..++|+.. ++ -..| ++.-..+++.++++- -+.++|+|+++-|+.+.|.+
T Consensus 40 G~~iv~ld~~e~~ryPdP~q~--------ef-----k~~~-~d~rnk~ls~a~~~d----kpLt~dnic~GvGsDE~ID~ 101 (375)
T KOG0633|consen 40 GRDIVKLDANENPRYPDPEQM--------EF-----KYVY-PDPRNKRLSDALAQD----KPLTSDNICVGVGSDELIDL 101 (375)
T ss_pred CCCceEeccccCCCCcCHHHc--------cc-----cccc-CCcccchhhhhcccC----CCCCccceEEecCcHHHHHH
Confidence 457889998886654445431 11 1124 233445677776664 37889999999999999998
Q ss_pred H-HHhcCCC-CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC-------CCCCccEEEEc
Q 013521 151 L-QMLLGSN-VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS-------TTSRTDIIFFC 221 (441)
Q Consensus 151 l-~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~-------~~~~~~~v~i~ 221 (441)
+ ...+.|| ++|+...|+|..|.-.+..-+ ++|+.+|+.++ |..+.+ ....+|.+++|
T Consensus 102 iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd------------~eVvkvpl~pd--F~lnvdai~evl~~ds~iK~~F~t 167 (375)
T KOG0633|consen 102 IIRCVCDPGKEKILDCPPTYSMYVVDAAIND------------AEVVKVPLNPD--FSLNVDAIAEVLELDSKIKCIFLT 167 (375)
T ss_pred HHhheecCCccceeecCCcceeEEEEeecCC------------ceEEEecCCCC--ccccHHHHHHHHhccccceEEEEc
Confidence 5 5668999 899999999998876665555 68999999874 444422 23589999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
+|+||||..+..+++.+|++.=. +.+|++||+|.+|...+....+. ...++++++.+|||.||++|+|+||-..+
T Consensus 168 SPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S~~~lV---~kYpNLivlqTlSKsfGLAGiRvG~~~~~ 242 (375)
T KOG0633|consen 168 SPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVESRMKLV---KKYPNLIVLQTLSKSFGLAGIRVGYGAFP 242 (375)
T ss_pred CCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeeccccccchHh---HhCCceeehhhhhhhcCcceeEeeccccc
Confidence 99999999999999999997432 78999999999998754322222 23467899999999999999999999998
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eeCCCCce
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLK-VNGGKNAP 379 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~ 379 (441)
.++ +..+.+.+. .+ +.|.++..+|++++.+...+.++..++.+.+.+..+...|.+. ++. +..+..++
T Consensus 243 ~~i--------a~iln~~Ka-PY-NiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daN 312 (375)
T KOG0633|consen 243 LSI--------AEILNRAKA-PY-NISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDAN 312 (375)
T ss_pred HHH--------HHHHHhccC-Cc-cccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCccccc
Confidence 887 344444443 33 3788888889999997666778999999999999999999886 332 34556789
Q ss_pred EEEEEcCCCC---hHHHHHHHHHhcCeEEeC-CCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhhC
Q 013521 380 YVWVQFPGSS---SWDVFAEILEKTHILTIP-GSGFGPGGNEHIRVSAFGHREYISEACRRLKNFL 441 (441)
Q Consensus 380 ~~~~~~~~~~---~~~~~~~ll~~~gi~v~p-g~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~l 441 (441)
|+.+++.+.+ +..++.+++.+.||.|+- |+ ...-.+++|++.+. +|+-..+++.|++++
T Consensus 313 FiLi~v~~~~n~~akkly~q~at~~gVvVRfrgs--e~~c~G~lRitvGt-~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 313 FILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGS--EEGCKGYLRITVGT-PEENTVLMKCLKQFL 375 (375)
T ss_pred EEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCC--ccccceeEEEEcCC-cccchHHHHHHHhhC
Confidence 9999997332 345667777788999972 22 12246899999754 455577788887764
No 123
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=6.2e-29 Score=240.51 Aligned_cols=331 Identities=20% Similarity=0.204 Sum_probs=220.0
Q ss_pred CeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCCCCC----CCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 73 RLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGYKGY----GAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 73 ~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~~~Y----~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
.+++|+.+++ +.+.++.+.+++++.+.++.. +...| +......++++.+++++ +.+ +.|++++|+ ++
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~la~~~----~~~-~~iv~~sg~-~a 73 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGV--GAGGSRLISGTSDLHEELEEELAEFH----GKE-AALVFSSGY-AA 73 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCC--CCCCcCeecCCchHHHHHHHHHHHHh----CCC-CEEEeccHH-HH
Confidence 4678888775 455679999999999986542 22222 22334566777777765 543 456665564 56
Q ss_pred HHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC---CCCccEEEEcCC
Q 013521 148 ISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST---TSRTDIIFFCSP 223 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~---~~~~~~v~i~~p 223 (441)
+.+ +..++++||.|+++.|+|+++...+...| .+++.++..+...+...+.. ..+++++++++|
T Consensus 74 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g------------~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~ 141 (349)
T cd06454 74 NDGVLSTLAGKGDLIISDSLNHASIIDGIRLSG------------AKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGV 141 (349)
T ss_pred HHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcC------------CceEEecCCCHHHHHHHHHHhhccCCCeEEEEecc
Confidence 554 67778999999999999999888887777 46666643211111000111 135678888899
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccC-CCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIP-GAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
+||||...+ +++|+++|++||+++|+|++|+..........+...+ ...+.+++++|+||.++.+| ||++.++
T Consensus 142 ~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~ 215 (349)
T cd06454 142 YSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK 215 (349)
T ss_pred ccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH
Confidence 999999988 7899999999999999999997433321111111111 12356799999999998655 9999887
Q ss_pred cccccCCchhHHHHHHHHh-hhc-CCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 303 ELRYSNGYPVIKDFNRIVC-TCF-NGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
+++ +.+..... ... ...+...+.++.+.++.. ...+..+++++++++.+.+.|.++|+....++++.+
T Consensus 216 ~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~ 285 (349)
T cd06454 216 ELI--------DYLRSYARGFIFSTSLPPAVAAAALAALEVL--QGGPERRERLQENVRYLRRGLKELGFPVGGSPSHII 285 (349)
T ss_pred HHH--------HHHHHhchhhhccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcE
Confidence 763 33332211 111 234555555566666421 113567889999999999999988887766545555
Q ss_pred EEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEee--cCHHHHHHHHHHHHhh
Q 013521 381 VWVQFP-GSSSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSAF--GHREYISEACRRLKNF 440 (441)
Q Consensus 381 ~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~~--~~~~~~~~~l~~l~~~ 440 (441)
.++.++ .....++.+.|+++ ||.+.++.... ..+.+++|+++. .+++++++++++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 286 PPLIGDDPAKAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEeCCChHHHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 565554 33456777777766 99999864221 223579999974 5899999999999874
No 124
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=2.8e-28 Score=237.43 Aligned_cols=330 Identities=16% Similarity=0.177 Sum_probs=231.5
Q ss_pred CCCCeEEeCCCCC--CCCCcH---HHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCc
Q 013521 70 PDARLIRLGIGDT--TQPIPD---IITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGA 144 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~~~~~---~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~ 144 (441)
.+.+++.|..+++ |+..+. .+.+++.+++.. +..+|++..|..+|++++++++ +. +++++|+|+
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~-----gd~~Y~~~~g~~~Leeaia~~~----g~--~~vv~t~~G 77 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMML-----GDEAYAGSKSFYDLEDAVQDLF----GF--KHIIPTHQG 77 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHh-----CCCccCCCCCHHHHHHHHHHHH----CC--CeEEEcCCH
Confidence 3568999999998 776653 555555666552 2246999999999999999997 33 589999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCC------cc--CCCCC----
Q 013521 145 QSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENN------FF--PDLST---- 211 (441)
Q Consensus 145 ~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~------~~--~~~~~---- 211 (441)
++|+.+ +..+++|||.| +++|.|..+...+...| ..++.++++++.+ |. +|+++
T Consensus 78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~G------------a~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~ 144 (431)
T cd00617 78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANG------------AVPVDLVIDEAHDAQELIPFKGNIDVAKLEKL 144 (431)
T ss_pred HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCC------------CEeEEEecccccccccccCCCCCcCHHHHHHH
Confidence 999997 67789999988 68999999988888888 5888888875432 32 44322
Q ss_pred -C----CCccEEEEcCCCCcc-ccCCCHHHHHHHHHHHHHcCcEEEEccccccc--cc-----CC-CCCcccccCCCcce
Q 013521 212 -T----SRTDIIFFCSPNNPT-GHAATWQQLKKLVEFAKANGSIIVYDSAYAAY--IT-----DP-SPRSIYEIPGAREV 277 (441)
Q Consensus 212 -~----~~~~~v~i~~p~NPt-G~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~--~~-----~~-~~~~~~~~~~~~~~ 277 (441)
. .++++|++++|+||+ |+++|.+++++|.++|++||++||+|+++... .+ ++ ...++. +.
T Consensus 145 I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~------ei 218 (431)
T cd00617 145 IDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA------EI 218 (431)
T ss_pred hCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH------HH
Confidence 1 247889999999998 99999999999999999999999999995421 11 11 123333 22
Q ss_pred eEEEecCCcccCCccce------eEEEEeeccccccCCchhHHHHHHHH----hhh-cCCCcHHHHHHHHH-hcCCCcHH
Q 013521 278 AIEISSFSKFAGFTGVR------LGWTVVPEELRYSNGYPVIKDFNRIV----CTC-FNGASNIVQAGGLA-CLSPDGFQ 345 (441)
Q Consensus 278 ~i~i~S~SK~~~~~G~r------~G~l~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~a~~~-~l~~~~~~ 345 (441)
++.+.|+||.+.+.|+| .||++++++.+ .+++.... ... ..+.+.. |.++.+ .|.+...
T Consensus 219 ~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l-------~~~~~~~~~~~~~~~~~gG~~~r-~~~A~A~gL~e~~~- 289 (431)
T cd00617 219 AREMFSYADGCTMSAKKDGLVNIGGFLALRDDEL-------YEEARQRVVLYEGFVTYGGMAGR-DMEALAQGLREAVE- 289 (431)
T ss_pred HHHhhccCCEEEEEeecCCCCccceEEEeCcHHH-------HHHHHHhccccCCccccccccHH-HHHHHHHHHHhccc-
Confidence 45577788888778877 56999987532 34433211 111 1112222 333333 4432111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCC---------CChHHHHHHHHHhcCeEEeC-CCCc---C
Q 013521 346 ALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG---------SSSWDVFAEILEKTHILTIP-GSGF---G 412 (441)
Q Consensus 346 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ll~~~gi~v~p-g~~f---~ 412 (441)
.+.+.+.++ +++++.+.|++.|+.+..|.+|+++|++++. ..+.+++.+|+++.||.+.. |+.. .
T Consensus 290 -~~~l~~~~~-~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~ 367 (431)
T cd00617 290 -EDYLRHRVE-QVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD 367 (431)
T ss_pred -HHHHHHHHH-HHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccC
Confidence 123333333 5699999999999999988999999999862 14788899999999999764 4421 1
Q ss_pred CC-------CCCeEEEEe---ecCHHHHHHHHHHHHhh
Q 013521 413 PG-------GNEHIRVSA---FGHREYISEACRRLKNF 440 (441)
Q Consensus 413 ~~-------~~~~iRls~---~~~~~~~~~~l~~l~~~ 440 (441)
+. .-..+||++ .-+.++++...+.|..+
T Consensus 368 ~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~ 405 (431)
T cd00617 368 PNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIAL 405 (431)
T ss_pred CCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHH
Confidence 11 136899997 23678888877777654
No 125
>PLN02721 threonine aldolase
Probab=99.97 E-value=5.5e-28 Score=234.22 Aligned_cols=320 Identities=18% Similarity=0.230 Sum_probs=206.2
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQ 152 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~ 152 (441)
.+++|+.+.++. +++.+.+++.+... . .....| +....+|++++|+|+ +.+. .+++++|+.+.+..+.
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~--~--~~~~~~--~~~~~~l~~~la~~~----~~~~-~~~~~~Gs~a~~~~l~ 73 (353)
T PLN02721 6 RVVDLRSDTVTK-PTDAMRAAMANAEV--D--DDVLGY--DPTALRLEEEMAKIF----GKEA-ALFVPSGTMGNLISVL 73 (353)
T ss_pred hhhhhhcccccC-CCHHHHHHHHhccC--C--CcccCC--CHHHHHHHHHHHHHh----CCce-eEEecCccHHHHHHHH
Confidence 368999999886 56777777765311 1 222334 334799999999997 4432 4555556555443466
Q ss_pred HhcC-CCCEEEEeCCCchhhHh---HHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--C-------CCccEE
Q 013521 153 MLLG-SNVTVAVQDPSFPAYID---TSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--T-------SRTDII 218 (441)
Q Consensus 153 ~l~~-~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~-------~~~~~v 218 (441)
.+++ +||+|++++|+|..... .+...| .+++.++.+++..++++ +++ . +++++|
T Consensus 74 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 74 VHCDVRGSEVILGDNSHIHLYENGGISTLGG------------VHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred HHccCCCCeEEEcCccceehhcccchhhhcC------------ceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 6676 99999999999865554 445555 47888887644322222 111 1 478999
Q ss_pred EEcC-CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 219 FFCS-PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 219 ~i~~-p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
++++ |+||||.++|.+++++|+++|++||+++|+|++|..........+...... +...++.|+||+++. ++||
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~--~~d~~~~s~sK~l~~---~~G~ 216 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVK--AADSVSVCLSKGLGA---PVGS 216 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhh--hCCEEEEecccccCC---ceee
Confidence 9986 488999999999999999999999999999998863221100112221111 122456689999873 3565
Q ss_pred -EEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHH--HHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCee-
Q 013521 298 -TVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGG--LACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKV- 372 (441)
Q Consensus 298 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~- 372 (441)
++.++++ ++.+...........+...+.++ ...++ ++.+++ ++..++++.+.+.|+++ ++.+
T Consensus 217 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~ 283 (353)
T PLN02721 217 VIVGSKSF--------IRKAKRLRKTLGGGMRQVGVLAAAALVALQ----ENVPKL-EDDHKKAKLLAEGLNQIKGLRVN 283 (353)
T ss_pred EEecCHHH--------HHhHHHHHHhcCCCeehhHHHHHHHHHHHH----HHHHHH-HHHHHHHHHHHHHHHhCCCcEEe
Confidence 5666666 34444443322222222222222 22222 223333 33456788999999987 7754
Q ss_pred eCCCCceEEEEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 373 NGGKNAPYVWVQFPG---SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 373 ~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
..++.++++|++++. .+..++.+.|. ++||.+.|+. ..+||+++ +.+++++++++++|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~------~~~lR~~~~~~~~~~~i~~~~~~l~~~~ 350 (353)
T PLN02721 284 VAAVETNIVYFDITDGSRITAEKLCKSLE-EHGVLLMPGN------SSRIRVVTHHQISDSDVQYTLSCFQQAA 350 (353)
T ss_pred cCCccceEEEEEccCCccccHHHHHHHHH-hCCcEEecCC------CceEEEEecCcCCHHHHHHHHHHHHHHh
Confidence 334567789999974 35566777766 6699999973 46899997 458999999999998764
No 126
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=7.4e-28 Score=238.56 Aligned_cols=340 Identities=16% Similarity=0.150 Sum_probs=227.0
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCC-CCCCCCC---CcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVK-GYKGYGA---EQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQS 146 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~-~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~~ 146 (441)
.+.+.|+.+... +.|+.+.+++.+.+.+..... ...+|.. .....++|+++|+++ +++ +++|++|+|+++
T Consensus 31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI----NASTSREIVFTRNATE 105 (424)
T ss_pred CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc----CCCCCCEEEEeCCHHH
Confidence 357999988765 577889999999887653211 1111211 123468899999986 664 589999999999
Q ss_pred HHHHH-HH----hcCCCCEEEEeCCCchhhH----hHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCC
Q 013521 147 DISRL-QM----LLGSNVTVAVQDPSFPAYI----DTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSR 214 (441)
Q Consensus 147 al~~l-~~----l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~ 214 (441)
+++.+ .. .+++||+|++..+.|++.. ..++..| .+++.++++.++.+.++ +++ .++
T Consensus 106 al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g------------~~v~~v~~~~~~~~~~~~l~~~i~~~ 173 (424)
T PLN02855 106 AINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTG------------AVLKFVGLTPDEVLDVEQLKELLSEK 173 (424)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcC------------CEEEEEecCCCCCcCHHHHHHHhccC
Confidence 99974 33 3689999999999888643 3334445 48888888654433222 221 368
Q ss_pred ccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccce
Q 013521 215 TDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVR 294 (441)
Q Consensus 215 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r 294 (441)
+++|++++|+||||.++| +++|+++|+++|+++|+|++|+.- ..+..+..+ +..+++.|++|.+|.+|
T Consensus 174 t~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g---~~~~~~~~~----~~d~~~~s~~K~~gp~G-- 241 (424)
T PLN02855 174 TKLVATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVP---HMPVDVQTL----GADFLVASSHKMCGPTG-- 241 (424)
T ss_pred ceEEEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcC---CcCCCchhc----CCCEEEeecccccCCCc--
Confidence 999999999999999999 778899999999999999999621 112223222 23488999999887455
Q ss_pred eEEEEeeccccccCCchhH------H------HHH-HHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Q 013521 295 LGWTVVPEELRYSNGYPVI------K------DFN-RIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKII 361 (441)
Q Consensus 295 ~G~l~~~~~~~~~~~~~~~------~------~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 361 (441)
+||++++++.+..-.+... . .+. ........+.+.....++.++++.......++.+++.++.++.+
T Consensus 242 ~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l 321 (424)
T PLN02855 242 IGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYL 321 (424)
T ss_pred cEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 8999998877522110000 0 000 00011111233333333333333111123477778888889999
Q ss_pred HHHHHhC-CCeeeCCC------CceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCC------CCCCeEEEEe--ecC
Q 013521 362 VDAFQSL-GLKVNGGK------NAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGP------GGNEHIRVSA--FGH 426 (441)
Q Consensus 362 ~~~L~~~-g~~~~~~~------~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~~iRls~--~~~ 426 (441)
.+.|+++ |+++..+. .+.++.+.+++....++.+.|.+++||.++.|..+.. ..+++||+|+ +++
T Consensus 322 ~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt 401 (424)
T PLN02855 322 YEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNT 401 (424)
T ss_pred HHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCC
Confidence 9999887 78876432 2457778887656667777766555999999875431 1246899997 679
Q ss_pred HHHHHHHHHHHHhh
Q 013521 427 REYISEACRRLKNF 440 (441)
Q Consensus 427 ~~~~~~~l~~l~~~ 440 (441)
++|++++++.|+++
T Consensus 402 ~~di~~l~~~l~~~ 415 (424)
T PLN02855 402 KEEVDAFIHALKDT 415 (424)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 127
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.96 E-value=6.2e-28 Score=236.09 Aligned_cols=334 Identities=16% Similarity=0.174 Sum_probs=216.6
Q ss_pred CCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
+.++|||..|. ..+ ..++.+.+++.+++.+... ....| +..-..++.+.++++ ++. +++++++|++++
T Consensus 26 g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~-~~~~~~~l~~~la~~----~g~--~~~~~~~sg~~a 96 (379)
T TIGR00707 26 GKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVH--VSNLY-YTEPQEELAEKLVEH----SGA--DRVFFCNSGAEA 96 (379)
T ss_pred CCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccc--ccccc-CCHHHHHHHHHHHhh----CCC--CEEEEeCCcHHH
Confidence 46789998863 223 3568999999998876431 11234 333455566666665 354 499999999999
Q ss_pred HHHHHHhc----C----CCCEEEEeCCCchhhHhHHHHhccccccccccC-ccceeEEeecCCCCCccCCCCC--CCCcc
Q 013521 148 ISRLQMLL----G----SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETG-KYRNIVYMNCRPENNFFPDLST--TSRTD 216 (441)
Q Consensus 148 l~~l~~l~----~----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~--~~~~~ 216 (441)
+..+..++ . +||+|++.+|+|+++...+...+.......... -..+...++.. + ..+++. .++++
T Consensus 97 ~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d-~~~l~~~~~~~~~ 172 (379)
T TIGR00707 97 NEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYN---D-IESLKKAIDDETA 172 (379)
T ss_pred HHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCC---C-HHHHHHHhhhCee
Confidence 88632322 2 379999999999988766665553211000000 00011111111 0 011111 24688
Q ss_pred EEEEcCCCCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcccee
Q 013521 217 IIFFCSPNNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRL 295 (441)
Q Consensus 217 ~v~i~~p~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~ 295 (441)
+|+++.++||+|.. ++.+++++|.++|++||+++|+||+|.+|.+.+.+.+.......++ +.+|||.++ +|+|+
T Consensus 173 ~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d----~~t~sK~~~-~G~ri 247 (379)
T TIGR00707 173 AVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPD----IITLAKGLG-GGVPI 247 (379)
T ss_pred EEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCC----EEEEccccc-CCccc
Confidence 88886557777764 7999999999999999999999999998765543222212211223 237899999 99999
Q ss_pred EEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCee---
Q 013521 296 GWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKV--- 372 (441)
Q Consensus 296 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--- 372 (441)
||++++++++ +.+.........+.++++|.++.++|+... .....++++++++.+.+.|++.+...
T Consensus 248 G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (379)
T TIGR00707 248 GATLAKEEVA--------EAFTPGDHGSTFGGNPLACAAALAVLEVIE---KERLLENVKEKGDYFKERLEELGKNYPNK 316 (379)
T ss_pred EEEEEcHHHH--------hhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 9999988773 444432222334578899999888885211 13456677777777777776642211
Q ss_pred eCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 373 NGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
..+..|+++|++++. +..++.+.+. ++||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 317 ~~~~~g~~~~~~~~~-~~~~~~~~l~-~~Gv~v~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 317 EVRGKGLMLGIELEA-PCKDIVKKAL-EKGLLVNCAG------PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred ccccCceEEEEEecC-cHHHHHHHHH-HCCcEEeeCC------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 112368899999864 3456666655 5699999852 47899995 468999999999999874
No 128
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=1.4e-27 Score=235.43 Aligned_cols=340 Identities=19% Similarity=0.178 Sum_probs=224.7
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC----CCcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYG----AEQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQ 145 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~ 145 (441)
+.+++.|+.+..+ ++|+.+.+++.+.+...........+. ......++|+.+|+++ +.+ +++|++|+|++
T Consensus 16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----~~~~~~~v~~~~g~t 90 (403)
T TIGR01979 16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI----NAASDEEIVFTRGTT 90 (403)
T ss_pred CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHH
Confidence 3468999988876 567888999988776432101111110 1224568889999886 776 68999999999
Q ss_pred HHHHHH-HHh----cCCCCEEEEeCCCchhhH----hHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CC
Q 013521 146 SDISRL-QML----LGSNVTVAVQDPSFPAYI----DTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TS 213 (441)
Q Consensus 146 ~al~~l-~~l----~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~ 213 (441)
++++++ ..+ +++||.|+++++.|++.. ..+...| .+++.++.+.++.+..+ +++ .+
T Consensus 91 ~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~i~~ 158 (403)
T TIGR01979 91 ESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTG------------ATLKFIPLDDDGTLDLDDLEKLLTE 158 (403)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcC------------cEEEEEecCCCCCCCHHHHHHHhcc
Confidence 999874 332 588999999999988743 3334455 58888888754332221 211 36
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccc
Q 013521 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGV 293 (441)
Q Consensus 214 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~ 293 (441)
+++++++++|+||||.++| +++|.++|++||+++|+|++|+.... +..+... +.++++.|++|.+|.+|
T Consensus 159 ~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~---~~~~~~~----~~d~~~~s~~K~~gp~G- 227 (403)
T TIGR01979 159 KTKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHM---PVDVQAL----DCDFYVFSGHKMYGPTG- 227 (403)
T ss_pred CCeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCcc---ccCcccc----CCCEEEEecccccCCCC-
Confidence 7999999999999999999 78899999999999999999874221 2222222 34599999999988556
Q ss_pred eeEEEEeeccccccCCchh-----HHH-------HHH-HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Q 013521 294 RLGWTVVPEELRYSNGYPV-----IKD-------FNR-IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKI 360 (441)
Q Consensus 294 r~G~l~~~~~~~~~~~~~~-----~~~-------~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 360 (441)
+|+++++++++....+.. .+. +.. .......+.+.....++.++++.......++.+++..+.++.
T Consensus 228 -~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~ 306 (403)
T TIGR01979 228 -IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAY 306 (403)
T ss_pred -ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 899998877642100000 000 000 000111223444444444444311111246777888888999
Q ss_pred HHHHHHhC-CCeeeCCC----CceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcC------CCCCCeEEEEe--ecCH
Q 013521 361 IVDAFQSL-GLKVNGGK----NAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFG------PGGNEHIRVSA--FGHR 427 (441)
Q Consensus 361 l~~~L~~~-g~~~~~~~----~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~------~~~~~~iRls~--~~~~ 427 (441)
+.+.|+++ |+++..+. .+.++.+.+++.+..++.+ .|+++||.+.+|..+. ...++++|+|+ ++++
T Consensus 307 l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~ 385 (403)
T TIGR01979 307 ALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTE 385 (403)
T ss_pred HHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCH
Confidence 99999887 78876543 2567777777555556554 5566799999886431 11257899997 4588
Q ss_pred HHHHHHHHHHHhh
Q 013521 428 EYISEACRRLKNF 440 (441)
Q Consensus 428 ~~~~~~l~~l~~~ 440 (441)
+|++++++.|+++
T Consensus 386 ~di~~l~~~l~~~ 398 (403)
T TIGR01979 386 EDIDALVEALKKV 398 (403)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999765
No 129
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=1e-27 Score=235.97 Aligned_cols=338 Identities=15% Similarity=0.156 Sum_probs=216.6
Q ss_pred CCCCeEEeCCCCC--CCC-CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDT--TQP-IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~~-~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|.+ .+. .++.+.+++.+.+.... .....| ..++++++++++.+..+ .+++++|+|+++
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~-----~~~~~~~la~~l~~~~~--~~~v~~~~gg~e 107 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI--HTSNLY-----YIEPQEELAEKLVELSG--MDKVFFCNSGAE 107 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcc--cccccc-----CCHHHHHHHHHHHhhcC--CCEEEECCCcHH
Confidence 3567899988753 233 35889999999887532 111223 25678888888765434 489999999999
Q ss_pred HHHH-HHHhcCCC-------CEEEEeCCCchhhHhHHHHhccccccccccCc-cceeEEeecCCCCCccCCCCC--CCCc
Q 013521 147 DISR-LQMLLGSN-------VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGK-YRNIVYMNCRPENNFFPDLST--TSRT 215 (441)
Q Consensus 147 al~~-l~~l~~~g-------d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~v~~v~~~~~~~~~~~~~~--~~~~ 215 (441)
|+.+ +..+...+ +.|++..++|+++.......+........... ...+..++..+ ..++++ .+++
T Consensus 108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~~l~~~i~~~~ 183 (396)
T PRK02627 108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFND----IEALKAAITDKT 183 (396)
T ss_pred HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCC----HHHHHHhcCCCe
Confidence 9997 44333222 68999999999876555444321100000000 00111111110 011111 2578
Q ss_pred cEEEEcCCCCccc-cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccce
Q 013521 216 DIIFFCSPNNPTG-HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVR 294 (441)
Q Consensus 216 ~~v~i~~p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r 294 (441)
++|+++.++||+| .+++.+.+++|.++|++||+++|+||+|.+|...+.+.+.....-.++ +.||||.++ +|+|
T Consensus 184 ~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~~~-~G~r 258 (396)
T PRK02627 184 AAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD----IMTLAKGLG-GGVP 258 (396)
T ss_pred EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC----EEEEcchhh-CCcc
Confidence 8999888899999 689999999999999999999999999998765543222222221233 347999998 9999
Q ss_pred eEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 013521 295 LGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSLGLKVN 373 (441)
Q Consensus 295 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 373 (441)
+||++++++++ +.+.........+.+++.|.++.++++.... .+.++.++..+..++.+.+.+.+++....
T Consensus 259 ig~~~~~~~~~--------~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 330 (396)
T PRK02627 259 IGAVLAKEKVA--------DVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKE 330 (396)
T ss_pred cEEEEEcHHHH--------hccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 99999998763 3343322334456789999998888863211 22233333333333333333333322111
Q ss_pred CCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 374 GGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
....|.++|++++ .+..+++..++++ ||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 331 ~~~~g~~~~i~~~-~~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~l 392 (396)
T PRK02627 331 VRGLGLMIGIELD-RPAAEIVKKALEK-GLLINVTG------DNVLRLLPPLIISKEEIDEAVDRLEEVL 392 (396)
T ss_pred eccCcEEEEEEec-CcHHHHHHHHHHC-CeEEeecC------CCEEEEECCcccCHHHHHHHHHHHHHHH
Confidence 2236889999984 3567788888776 99999863 46799985 568999999999998753
No 130
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.8e-27 Score=217.08 Aligned_cols=342 Identities=19% Similarity=0.235 Sum_probs=254.7
Q ss_pred cCCCCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCC-----CCCCcE--E
Q 013521 68 KHPDARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMG-----IEGDEI--F 139 (441)
Q Consensus 68 ~~~~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~-----~~~~~I--~ 139 (441)
+.+.++.|||++|.+ +..--..+.++++++-+.+........|-|..|.++.++++++.+ +| ++.++| +
T Consensus 22 ~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll---FG~d~~~l~~~Rv~t~ 98 (396)
T COG1448 22 ADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL---FGADSPALAEDRVATV 98 (396)
T ss_pred cCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh---cCCCcHHHHhhhHhhe
Confidence 345568899999975 222223345555555555444466778999999999999999998 44 233433 4
Q ss_pred EcCCcHHHHHHH---HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-------C
Q 013521 140 ISDGAQSDISRL---QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-------L 209 (441)
Q Consensus 140 ~t~G~~~al~~l---~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-------~ 209 (441)
-|.|+|.|+.+. ..-+.|...|++++|+|+++..++...| .++...|..+..+-..| +
T Consensus 99 Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aG------------l~v~~Y~Yyd~~~~~~df~~mla~L 166 (396)
T COG1448 99 QTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAG------------LEVETYPYYDAETKGLDFDGMLADL 166 (396)
T ss_pred ecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcC------------CceeeeeccccccccccHHHHHHHH
Confidence 789999999863 4445677789999999999999999999 57777776554333333 3
Q ss_pred CCCCCccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCcccccCCCcceeEEEecCCc
Q 013521 210 STTSRTDIIFFCSP-NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS--PRSIYEIPGAREVAIEISSFSK 286 (441)
Q Consensus 210 ~~~~~~~~v~i~~p-~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~--~~~~~~~~~~~~~~i~i~S~SK 286 (441)
...+...+|++.-+ |||||.-++.+++++|+++.++.+.+.+.|-+|..|..+-. ...+..+.....-.++..||||
T Consensus 167 ~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SK 246 (396)
T COG1448 167 KTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSK 246 (396)
T ss_pred HhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhh
Confidence 33466677777643 99999999999999999999999999999999998765421 2222222222223799999999
Q ss_pred ccCCccceeEEEEe--eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-----HHHHHHHHHHHHHHH
Q 013521 287 FAGFTGVRLGWTVV--PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-----QALRTVIDYYKENAK 359 (441)
Q Consensus 287 ~~~~~G~r~G~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~ 359 (441)
.||+-|-|+|.+.+ ++... ..++..++.......+.+++......+...|++... ..+..+++++.+.|+
T Consensus 247 nfgLYgERVGa~~vva~~~~~---a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~ 323 (396)
T COG1448 247 NFGLYGERVGALSVVAEDAEE---ADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQ 323 (396)
T ss_pred hhhhhhhccceeEEEeCCHHH---HHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997654 33221 222344556666677777888888888888887654 457899999999999
Q ss_pred HHHHHHHhC----CCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-CHHHHHHHH
Q 013521 360 IIVDAFQSL----GLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG-HREYISEAC 434 (441)
Q Consensus 360 ~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~~~~~~l 434 (441)
.|.+.|.+. .+.+...+.|+|.+..+ +.+.+.+|.+++||++.... ||+++. +..+++...
T Consensus 324 ~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl----s~~QV~rLree~~IY~v~sG----------Ri~vaGl~~~ni~~va 389 (396)
T COG1448 324 ALVDALKALGAPRNFDFIISQRGMFSYTGL----SPEQVDRLREEFGIYLVASG----------RINVAGLNTSNIDYVA 389 (396)
T ss_pred HHHHHHHhhCCCcccchHhhcCceeecCCC----CHHHHHHHHHhccEEEecCC----------eeeeccCChhhHHHHH
Confidence 999999984 47777778999988754 46788999999999987532 999865 899999999
Q ss_pred HHHHhhC
Q 013521 435 RRLKNFL 441 (441)
Q Consensus 435 ~~l~~~l 441 (441)
+.|.+++
T Consensus 390 ~ai~~v~ 396 (396)
T COG1448 390 KAIAAVL 396 (396)
T ss_pred HHHHhhC
Confidence 9998764
No 131
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=4.4e-27 Score=228.13 Aligned_cols=313 Identities=16% Similarity=0.148 Sum_probs=211.5
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCCCc--CcHHHHHHHHHHHhhhCCCCC-CcEEEcCCcHHHHHH-HHHhcCCCC
Q 013521 84 QPIPDIITSAMAEHAFALSTVKGYKGYGAEQ--GNMALRTAIADKFYKDMGIEG-DEIFISDGAQSDISR-LQMLLGSNV 159 (441)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~--g~~~lr~~ia~~l~~~~~~~~-~~I~~t~G~~~al~~-l~~l~~~gd 159 (441)
.+.|+.+.+++.+.+.. ..| +.. -..++++.+++++ ++++ +.+++|+|+++++.+ +..++++||
T Consensus 8 ~~~~~~v~~a~~~~~~~-------~~~-~~~~~~~~~~~~~la~~~----g~~~~~~~~~~~~~t~al~~~~~~~~~~g~ 75 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG-------HRS-PEFLALMDEILEGLRYVF----QTENGLTFLLSGSGTGAMEAALSNLLEPGD 75 (356)
T ss_pred cCCCHHHHHHhCCCccC-------CCC-HHHHHHHHHHHHHHHHHh----cCCCCCEEEEecCcHHHHHHHHHHhCCCCC
Confidence 45778888888654321 122 211 1446666666665 7754 457888888999987 677889999
Q ss_pred EEEEeCCCchh--hHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CC-CccEEEEcCCCCccccCCCH
Q 013521 160 TVAVQDPSFPA--YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TS-RTDIIFFCSPNNPTGHAATW 233 (441)
Q Consensus 160 ~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~-~~~~v~i~~p~NPtG~~~~~ 233 (441)
+|++..++|++ +...++..| .+++.++.+++...+.+ +++ .+ ++++|++++|+||||.+++
T Consensus 76 ~vl~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~- 142 (356)
T cd06451 76 KVLVGVNGVFGDRWADMAERYG------------ADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP- 142 (356)
T ss_pred EEEEecCCchhHHHHHHHHHhC------------CCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC-
Confidence 99999998876 455666677 58888888754322221 221 23 8899999999999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhH
Q 013521 234 QQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVI 313 (441)
Q Consensus 234 ~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 313 (441)
+++|.++|+++|+++++|++|.. +..+.++... +..+++.|++|+++ .+.++||++.+++++
T Consensus 143 --~~~i~~~a~~~~~~li~D~~~~~---g~~~~~~~~~----~~d~~~~s~~K~l~-~p~g~G~l~~~~~~~-------- 204 (356)
T cd06451 143 --LEGIGALAKKHDALLIVDAVSSL---GGEPFRMDEW----GVDVAYTGSQKALG-APPGLGPIAFSERAL-------- 204 (356)
T ss_pred --HHHHHHHHHhcCCEEEEeeehhc---cCcccccccc----CccEEEecCchhcc-CCCCcceeEECHHHH--------
Confidence 77788899999999999998862 1112233222 22367789999998 445799999988764
Q ss_pred HHHHH----------------HHh---hhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 013521 314 KDFNR----------------IVC---TCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNG 374 (441)
Q Consensus 314 ~~~~~----------------~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 374 (441)
+.+.. ... ....+++...+.++.++++......+++..++.+++++++.+.|++.|+++..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 284 (356)
T cd06451 205 ERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLA 284 (356)
T ss_pred HHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence 22211 000 11122334444444444432112345677888889999999999988887754
Q ss_pred CC---CceEEEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 375 GK---NAPYVWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 375 ~~---~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
++ .+.++|+.++ +.+..++++.|.++.||.+.+|..+. .+++||+++ .++++++++++++|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~--~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 285 KPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPT--AGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred CcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccc--cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 32 3445678876 34556677776655599999987432 346999997 358999999999998864
No 132
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.96 E-value=3.2e-27 Score=232.99 Aligned_cols=336 Identities=17% Similarity=0.164 Sum_probs=226.0
Q ss_pred CCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCC--CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKG--YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
+.++++|+.+++ ++..+|.+.+++.+.+..++...+ ...|++.....+|++++|+++ + .++.+++++|+...
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~----g-~~~~~~~~sG~~an 119 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH----G-KEAALVFTSGYVSN 119 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh----C-CCcEEEECcHHHHH
Confidence 356899999985 677889999999999887642111 112444556788888888886 5 35678888887654
Q ss_pred HHHHHHhc--CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCC
Q 013521 148 ISRLQMLL--GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSP 223 (441)
Q Consensus 148 l~~l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p 223 (441)
..++..+. .+++.|+.....|.+....+...+ .++..++..+-..+..-+.. .+++++|++++|
T Consensus 120 ~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~------------~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v 187 (407)
T PRK09064 120 DATLSTLAKLIPDCVIFSDELNHASMIEGIRRSR------------CEKHIFRHNDVAHLEELLAAADPDRPKLIAFESV 187 (407)
T ss_pred HHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcC------------CcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCC
Confidence 54455444 478877777777777766666555 34444443211111101111 146789999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC-CcceeEEEecCCcccCCccceeEEEEeec
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG-AREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
+||+|.+.+ +++|.++|++||+++|+||+|+...++.....+....+ ..+.+++++||||.+|++| ||+++++
T Consensus 188 ~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~ 261 (407)
T PRK09064 188 YSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSA 261 (407)
T ss_pred CCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCH
Confidence 999999998 88899999999999999999984333322222222212 1234688999999999888 9999887
Q ss_pred cccccCCchhHHHHHHHHhh-h-cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 303 ELRYSNGYPVIKDFNRIVCT-C-FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
+++ +.+...... . ..+.++..+.++.+.++.. +.....+++++++++++.+.|++.|+++.+ +.+++
T Consensus 262 ~~~--------~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~i 330 (407)
T PRK09064 262 ALV--------DAVRSYAPGFIFTTSLPPAIAAAALASIRHL--KESNEERERHQERAAKLKAALDAAGIPVMP-NESHI 330 (407)
T ss_pred HHH--------HHHHHhCccccccCcCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCCE
Confidence 763 444332221 1 2235566666666666421 111334678889999999999988887765 45777
Q ss_pred EEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 381 VWVQFPG-SSSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 381 ~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
+++.++. ....++.+++++++||.+.+..... +.+.+++||++ ..++++++++++.|+++
T Consensus 331 v~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 331 VPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 8887753 2345677777776799999865432 22457899996 45899999999999875
No 133
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=2.5e-27 Score=230.29 Aligned_cols=279 Identities=14% Similarity=0.125 Sum_probs=192.8
Q ss_pred cHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCcccee
Q 013521 116 NMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNI 194 (441)
Q Consensus 116 ~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v 194 (441)
..++++.+|+++ +++ .+++++|+++++.. +..++++||.|+++.+.|.+....++..| .++
T Consensus 53 ~~~~~e~lA~~~----g~~--~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g------------~~~ 114 (370)
T TIGR02539 53 IHDFLEDLAEFL----GMD--EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAG------------LNV 114 (370)
T ss_pred HHHHHHHHHHHh----CCC--ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcC------------CEE
Confidence 567888899886 654 56678999999987 67778999999999999877767777777 588
Q ss_pred EEeecCCCCCccCCCCC-----C-------CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC
Q 013521 195 VYMNCRPENNFFPDLST-----T-------SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD 262 (441)
Q Consensus 195 ~~v~~~~~~~~~~~~~~-----~-------~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~ 262 (441)
+.++.+.+.++..|++. . .++++|++++|+||||...+ +++|+++|+++|+++|+||+|+....
T Consensus 115 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~- 190 (370)
T TIGR02539 115 KEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRM- 190 (370)
T ss_pred EEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCc-
Confidence 88887643333344321 1 26789999999999999888 78888999999999999999996321
Q ss_pred CCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhh-c-------CCCcHHHHHH
Q 013521 263 PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTC-F-------NGASNIVQAG 334 (441)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~a 334 (441)
+.+.... +..++++||||+++ +|.|+||++++++++ +.+....... . .......+.+
T Consensus 191 --~~~~~~~----~~di~v~s~sK~~~-~~g~~G~l~~~~~~i--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (370)
T TIGR02539 191 --PVSAKEI----GADFIVGSGHKSMA-ASGPCGVLGMSEEWE--------DIVLRKSRYSPVKEVELLGCTSRGAPIVT 255 (370)
T ss_pred --CCCHHHc----CCCEEEeeCccccc-CCCCEEEEEECHHHH--------hhhcccccCCccceeeeecccccccHHHH
Confidence 2222222 23478899999998 778999999998874 3333322110 0 0111113333
Q ss_pred HHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeee--CCCCceEEEEEcCCC---------ChHHHHHHHHHhcCe
Q 013521 335 GLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVN--GGKNAPYVWVQFPGS---------SSWDVFAEILEKTHI 403 (441)
Q Consensus 335 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~ll~~~gi 403 (441)
+.+++.+ ..++++...+.++. ++++.+.|+++|+++. .++.++|++++++.. ....+.+.|. ++||
T Consensus 256 ~~~al~~-~~~~l~~~~~~~~~-~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~-e~GI 332 (370)
T TIGR02539 256 MMASFPH-VVERVKRWDEEVKK-TRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELK-KRGI 332 (370)
T ss_pred HHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHH-hCCC
Confidence 4444431 12334444444444 4589999999998763 356788999998632 1223555554 5599
Q ss_pred E-EeCCCCcCCCCCCeEEEEe-ecCHHHHHHHHHHHHhh
Q 013521 404 L-TIPGSGFGPGGNEHIRVSA-FGHREYISEACRRLKNF 440 (441)
Q Consensus 404 ~-v~pg~~f~~~~~~~iRls~-~~~~~~~~~~l~~l~~~ 440 (441)
. +++| .++++|+++ ..++++++++++.|+++
T Consensus 333 ~~ir~~------~~~~iRis~~~~t~e~i~~l~~~L~~~ 365 (370)
T TIGR02539 333 HGIRSG------QTKYFKLSVYGLTKEQVEYVVDSFEEI 365 (370)
T ss_pred ccccCC------cceEEEEEecCCCHHHHHHHHHHHHHH
Confidence 7 5542 256999995 45899999999999875
No 134
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=3.7e-27 Score=232.38 Aligned_cols=338 Identities=16% Similarity=0.131 Sum_probs=225.0
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC----CCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCcHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYG----AEQGNMALRTAIADKFYKDMGI-EGDEIFISDGAQSD 147 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~~~a 147 (441)
+++.|+.+... +.|+.+.+++.+.+...........|. ...-..++|+++|+++ +. ++++|++|+|++++
T Consensus 23 ~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t~~ 97 (406)
T PRK09295 23 PLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI----NARSAEELVFVRGTTEG 97 (406)
T ss_pred ceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc----CcCCCCeEEEeCCHHHH
Confidence 57888888754 477889999999886532111111111 0123567888888886 65 67899999999999
Q ss_pred HHHH-HH----hcCCCCEEEEeCCCchhh----HhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCc
Q 013521 148 ISRL-QM----LLGSNVTVAVQDPSFPAY----IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRT 215 (441)
Q Consensus 148 l~~l-~~----l~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~ 215 (441)
++++ .. ++++||+|++.+++|++. ...++..| .+++.++.+.++..+.+ +++ .+++
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g------------~~v~~v~~~~~~~~d~~~l~~~i~~~t 165 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVG------------AELRVIPLNPDGTLQLETLPALFDERT 165 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcC------------cEEEEEecCCCCCCCHHHHHHhcCCCc
Confidence 9974 33 468999999999988764 33334455 58888888754332221 221 3689
Q ss_pred cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcccee
Q 013521 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRL 295 (441)
Q Consensus 216 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~ 295 (441)
+++++++|+||||.++| +++|+++|+++|+++++|++|+.... +..+... +..+++.|++|.+|.+| +
T Consensus 166 ~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~---~~~~~~~----~~D~~~~s~~K~~gp~G--~ 233 (406)
T PRK09295 166 RLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHH---PVDVQAL----DCDFYVFSGHKLYGPTG--I 233 (406)
T ss_pred EEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCcc---ccCchhc----CCCEEEeehhhccCCCC--c
Confidence 99999999999999999 78899999999999999999974321 2333222 33589999999888555 8
Q ss_pred EEEEeeccccccCCchhH-----------HH--HH-HHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Q 013521 296 GWTVVPEELRYSNGYPVI-----------KD--FN-RIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKII 361 (441)
Q Consensus 296 G~l~~~~~~~~~~~~~~~-----------~~--~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 361 (441)
||++++++.+....+... .. +. ........+.+.....++.++++.......++.+++.++.++++
T Consensus 234 G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l 313 (406)
T PRK09295 234 GILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYA 313 (406)
T ss_pred EEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999998876421100000 00 00 00011122344444444444443111112366778888888999
Q ss_pred HHHHHhC-CCeeeCCC-CceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCC------CCCCeEEEEe--ecCHHHHH
Q 013521 362 VDAFQSL-GLKVNGGK-NAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGP------GGNEHIRVSA--FGHREYIS 431 (441)
Q Consensus 362 ~~~L~~~-g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~~iRls~--~~~~~~~~ 431 (441)
.+.|.++ ++++..+. .+..+.+.+++....++... |+++||.++.|..+.. ..++.+|+|+ +++++|++
T Consensus 314 ~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did 392 (406)
T PRK09295 314 LSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD 392 (406)
T ss_pred HHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHH-HHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHH
Confidence 9999887 78776542 24566677776556666554 5677999999886532 1246899996 67999999
Q ss_pred HHHHHHHhh
Q 013521 432 EACRRLKNF 440 (441)
Q Consensus 432 ~~l~~l~~~ 440 (441)
.+++.|+++
T Consensus 393 ~l~~~l~~i 401 (406)
T PRK09295 393 RLVAGLQRI 401 (406)
T ss_pred HHHHHHHHH
Confidence 999999875
No 135
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=2.5e-27 Score=228.25 Aligned_cols=305 Identities=17% Similarity=0.137 Sum_probs=210.5
Q ss_pred CCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCE
Q 013521 82 TTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVT 160 (441)
Q Consensus 82 ~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~ 160 (441)
+++++|+.+++++.+++.. . ..|++.....++++.+++++ + ++++++++|+++++.+ +..++++||.
T Consensus 6 ~~~~~~~~v~~a~~~~~~~----~--~~~~~~~~~~~l~~~~a~~~----g--~~~~~~~~~gt~a~~~~~~~l~~~gd~ 73 (338)
T cd06502 6 TVTGPTPEMLEAMAAANVG----D--DVYGEDPTTAKLEARAAELF----G--KEAALFVPSGTAANQLALAAHTQPGGS 73 (338)
T ss_pred cCCCCCHHHHHHHHhcccC----C--cccCCCHHHHHHHHHHHHHh----C--CCeEEEecCchHHHHHHHHHhcCCCCe
Confidence 4456788899999886532 1 25766777888999998886 5 5678888888899887 6777899999
Q ss_pred EEEeCCCchhhHh---HHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----C-------CCccEEEEcCCCC
Q 013521 161 VAVQDPSFPAYID---TSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----T-------SRTDIIFFCSPNN 225 (441)
Q Consensus 161 Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~-------~~~~~v~i~~p~N 225 (441)
|+++.|+|..+.. .....| .+++.++.+. . ..++++ . +++++|++++|+|
T Consensus 74 v~~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~-~--~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n 138 (338)
T cd06502 74 VICHETAHIYTDEAGAPEFLSG------------VKLLPVPGEN-G--KLTPEDLEAAIRPRDDIHFPPPSLVSLENTTE 138 (338)
T ss_pred EEEecCcceeeecCCcHHHHcC------------ceEEeecCCC-C--cCCHHHHHHHhhccCCCcCCcceEEEEEeecC
Confidence 9999999976543 234456 4777787643 2 233221 1 2689999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEE-EEeeccc
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW-TVVPEEL 304 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~-l~~~~~~ 304 (441)
| |.+++.+++++|+++|++||+++|+|++|..+.......++.......+ +++.|+||++++|| |+ +++++++
T Consensus 139 ~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~~~~~~---g~~~~~~~~~ 212 (338)
T cd06502 139 G-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD--SVSFCLSKGGGAPV---GAVVVGNRDF 212 (338)
T ss_pred C-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC--EEEEeccccCCCcc---ceEEECCHHH
Confidence 7 7777999999999999999999999999864432111113333221122 56889999999887 54 4566666
Q ss_pred cccCCchhHHHHHHHHhhh--cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEE
Q 013521 305 RYSNGYPVIKDFNRIVCTC--FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVW 382 (441)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 382 (441)
.+.+....... ....+.+.+.++.+.|++..+ .+..+++.++++++.+.|+++|+.+.+ ..++++.
T Consensus 213 --------~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~ 280 (338)
T cd06502 213 --------IARARRRRKQAGGGMRQSGFLAAAGLAALENDLW---LRRLRHDHEMARRLAEALEELGGLESE-VQTNIVL 280 (338)
T ss_pred --------HHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchH---HHHHHHHHHHHHHHHHHHHhcCCCccc-ccCCeEE
Confidence 34444433221 223566777878888875433 345577778889999999988776554 4677778
Q ss_pred EEcCCCChHHHHHHHHH------hcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHh
Q 013521 383 VQFPGSSSWDVFAEILE------KTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKN 439 (441)
Q Consensus 383 ~~~~~~~~~~~~~~ll~------~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~ 439 (441)
++++.. ......+.+ ++|+.+.+.. .++||++. ..+++++++++++|++
T Consensus 281 v~~~~~--~~~~~~l~~~l~~~~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 281 LDPVEA--NAVFVELSKEAIERRGEGVLFYAWG------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred EecCCc--cHHHHHHHHHHHHhhhCCEEEEecC------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 877532 222233322 4599987742 27899996 3489999999999875
No 136
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=1.9e-27 Score=232.72 Aligned_cols=334 Identities=14% Similarity=0.109 Sum_probs=221.6
Q ss_pred EEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCC----CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 75 IRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGA----EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 75 i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
+.|+.+..+ ++|+.+.+++.+.+........ ..|.. ..-..++|+.+|+++ +.++++|++|+|+++++..
T Consensus 2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~i~~~~g~t~a~~~ 75 (381)
T PRK02948 2 IYLDYAATT-PMSKEALQTYQKAASQYFGNES-SLHDIGGTASSLLQVCRKTFAEMI----GGEEQGIYFTSGGTESNYL 75 (381)
T ss_pred EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCc-cccHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCcHHHHHHH
Confidence 455555543 4678899999988865421111 11110 122456677777775 7889999999999999886
Q ss_pred -HHHhc----CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcC
Q 013521 151 -LQMLL----GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCS 222 (441)
Q Consensus 151 -l~~l~----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~ 222 (441)
+..++ ++||.|++..+.|+++......+...| .+++.++++.++..+.+ +++ .+++++|++++
T Consensus 76 ~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g---------~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~ 146 (381)
T PRK02948 76 AIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQG---------YTVTEIPVDKSGLIRLVDLERAITPDTVLASIQH 146 (381)
T ss_pred HHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCC---------CEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEEC
Confidence 44454 578999999988877665554433222 48888888754322221 222 35788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
|+||||.++| +++|.++|+++|+++++|+++. +.. .+..+.. .+.++++.|+||.+|.+| +|++++++
T Consensus 147 ~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~-~g~--~~~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~~ 214 (381)
T PRK02948 147 ANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQT-FGK--LPIDVFE----MGIDSLSVSAHKIYGPKG--VGAVYINP 214 (381)
T ss_pred CcCCcEeehh---HHHHHHHHHHcCCEEEEEChhh-ccc--cccCccc----CCCCEEEecHHhcCCCCc--EEEEEEcC
Confidence 9999999999 7789999999999999998765 221 1222222 235688999999998777 89988877
Q ss_pred cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCce---
Q 013521 303 ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAP--- 379 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~--- 379 (441)
+...... .............+++.+.+.++.++++. ..+++++.+++.++.++++.+.|+++|+++.......
T Consensus 215 ~~~~~~~---~~~~~~~~~~~~~t~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~ 290 (381)
T PRK02948 215 QVRWKPV---FPGTTHEKGFRPGTVNVPGIAAFLTAAEN-ILKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCL 290 (381)
T ss_pred CCCCCCc---ccCCCCCCCcCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCc
Confidence 6410000 00000001112345777888878777763 2245688889999999999999998876554321122
Q ss_pred --EEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCC-----------------CCCCeEEEEe--ecCHHHHHHHHHHHH
Q 013521 380 --YVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGP-----------------GGNEHIRVSA--FGHREYISEACRRLK 438 (441)
Q Consensus 380 --~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----------------~~~~~iRls~--~~~~~~~~~~l~~l~ 438 (441)
.+.+.+++.+..++...| +++||.+++|+.+.. ...++||+|+ ++++++++++++.|+
T Consensus 291 ~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~ 369 (381)
T PRK02948 291 PHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALE 369 (381)
T ss_pred CCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHH
Confidence 233344544556666665 566999999885321 1247899997 458999999999998
Q ss_pred hh
Q 013521 439 NF 440 (441)
Q Consensus 439 ~~ 440 (441)
++
T Consensus 370 ~~ 371 (381)
T PRK02948 370 TI 371 (381)
T ss_pred HH
Confidence 75
No 137
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=6.1e-27 Score=230.80 Aligned_cols=333 Identities=18% Similarity=0.181 Sum_probs=219.9
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHH-hhccC-CCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHA-FALST-VKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~-~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
+.++|..++.. .++.+.+++.+.+ ..+.. .++...|....+...+++.+++++.+.++.+..+|++++| ++++.+
T Consensus 20 ~~~~~~~~~~~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sg-t~a~~~ 96 (402)
T cd00378 20 ETLELIASENF--TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSG-SQANLA 96 (402)
T ss_pred hCeeeeccCCc--CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCc-HHHHHH
Confidence 46888777653 4788999998765 23321 1233346566677788887766665556777666777765 578776
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhH-----HHHhccccccccccCccceeEEeecCCCC-CccCCCCC------CCCccE
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDT-----SVIVGQAGKFLKETGKYRNIVYMNCRPEN-NFFPDLST------TSRTDI 217 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~-----~~~~g~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~~------~~~~~~ 217 (441)
+..+++|||+|++++|+|+++... +...| .++..++++.+. ++..|++. .+++++
T Consensus 97 ~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g------------~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~ 164 (402)
T cd00378 97 VYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASG------------KLFESVPYGVDPETGLIDYDALEKMALEFKPKL 164 (402)
T ss_pred HHHHhcCCCCEEEEecCccCccccccccccccccc------------eeEEEecCCcCcccCCcCHHHHHHHHHhCCCCE
Confidence 677889999999999999877543 33344 355556554321 23344332 257899
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccc-cccccCCC-CCcccccCCCcceeEEEecCCcccCCcccee
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAY-AAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRL 295 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~-~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~ 295 (441)
+++++|+||+ ..+ +++|+++|++||++||+|++| ..+.+.+. +.++. . . .++++|+||++ +|+|.
T Consensus 165 v~~~~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~---~-~--dv~~~s~sK~l--~G~~g 231 (402)
T cd00378 165 IVAGASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP---G-A--DVVTTTTHKTL--RGPRG 231 (402)
T ss_pred EEecCcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc---C-C--cEEEeccccCC--CCCCc
Confidence 9998998874 344 889999999999999999996 33433332 22221 1 2 27899999987 78999
Q ss_pred EEEEeec-cccccCCchhHHHHHHHHhhhcCCCcHHHHH-HHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 013521 296 GWTVVPE-ELRYSNGYPVIKDFNRIVCTCFNGASNIVQA-GGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVN 373 (441)
Q Consensus 296 G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 373 (441)
||+++++ ++ .+.+.........+.+.+.+. ++..++......+.++.+++++++++++.+.|+++|+.+.
T Consensus 232 g~i~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 303 (402)
T cd00378 232 GLILTRKGEL--------AKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVV 303 (402)
T ss_pred eEEEeccHHH--------HHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEe
Confidence 9999987 55 345544333222222322222 2222222111124567778899999999999999888875
Q ss_pred -CCCCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCC----cCCCCCCeEEEEeec------CHHHHHHHHHHHHhhC
Q 013521 374 -GGKNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSG----FGPGGNEHIRVSAFG------HREYISEACRRLKNFL 441 (441)
Q Consensus 374 -~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~----f~~~~~~~iRls~~~------~~~~~~~~l~~l~~~l 441 (441)
.+.+++++|+++++ ..+.+.+..+++++||.+.++.. +++...+++|+++.. +.++++++++.|++++
T Consensus 304 ~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 304 SGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred ecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 35678999999973 22334555667788999986432 112245789999632 5899999999998753
No 138
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.3e-26 Score=224.14 Aligned_cols=340 Identities=21% Similarity=0.199 Sum_probs=242.4
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCC----cCcHHHHHHHHHHHhhhCCCCC-CcEEEcCCcH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAE----QGNMALRTAIADKFYKDMGIEG-DEIFISDGAQ 145 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~----~g~~~lr~~ia~~l~~~~~~~~-~~I~~t~G~~ 145 (441)
+++++.|+...... .|..+.+++.+....+....+...|... .-+.+.|+.+|+++ +.++ ++|++|.|+|
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~----~a~~~~eIvft~~tT 94 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL----NADSSDEIVFTRGTT 94 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh----CCCCCCeEEEeCChh
Confidence 45688888777654 7899999999998776533333333322 24577888888886 8885 9999999999
Q ss_pred HHHHHH-HHh---cCCCCEEEEeCCCchhhHhHHHHhccc-cccccccCccceeEEeecCCCCCccCC-CC--CCCCccE
Q 013521 146 SDISRL-QML---LGSNVTVAVQDPSFPAYIDTSVIVGQA-GKFLKETGKYRNIVYMNCRPENNFFPD-LS--TTSRTDI 217 (441)
Q Consensus 146 ~al~~l-~~l---~~~gd~Vlv~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~--~~~~~~~ 217 (441)
++++++ ..+ +++||+|++..-.|++....+..+..+ | ++++.+|+++++.+..+ ++ ..++||+
T Consensus 95 ~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~G---------a~v~~i~~~~~g~~~~~~~~~~i~~~Tkl 165 (405)
T COG0520 95 EALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTG---------AKVRVIPLDDDGLLDLDALEKLITPKTKL 165 (405)
T ss_pred HHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcC---------cEEEEEecCCCCCcCHHHHHHhcCCCceE
Confidence 999984 555 689999999999998876655555433 3 48999999855444333 22 1478999
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCc-ccCCccceeE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSK-FAGFTGVRLG 296 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK-~~~~~G~r~G 296 (441)
|.+++.+|.||++.| +++|+++|+++|+++++|.+++--+. +..+..+ +..++..|.+| .+| | ..+|
T Consensus 166 vais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h~---~idv~~l----~~Df~afsgHKwl~g-P-~GiG 233 (405)
T COG0520 166 VALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAAGHL---PIDVQEL----GCDFLAFSGHKWLLG-P-TGIG 233 (405)
T ss_pred EEEECccccccccch---HHHHHHHHHHcCCEEEEECccccCcc---CCCchhc----CCCEEEEcccccccC-C-CceE
Confidence 999999999999999 99999999999999999999873111 3333333 55699999999 555 4 3499
Q ss_pred EEEeeccccccCCch-----------------hHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Q 013521 297 WTVVPEELRYSNGYP-----------------VIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAK 359 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 359 (441)
.++++++++....+. ......+....+.+....+...++...+... .++.+.++-++..+
T Consensus 234 vLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~i---g~~~i~~~e~~L~~ 310 (405)
T COG0520 234 VLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEI---GMEAIEAHERELTE 310 (405)
T ss_pred EEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHH---hHHHHHHHHHHHHH
Confidence 999999886331110 0001111111111112222223333333332 25778888888899
Q ss_pred HHHHHHHhC-CCeeeCCC---CceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCC------CCCeEEEEe--ecCH
Q 013521 360 IIVDAFQSL-GLKVNGGK---NAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPG------GNEHIRVSA--FGHR 427 (441)
Q Consensus 360 ~l~~~L~~~-g~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~------~~~~iRls~--~~~~ 427 (441)
++.+.|+++ +++++.++ .+..+.+.+++....++...|.++ ||.++.|..+... -...+|+|+ +++.
T Consensus 311 ~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~-gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~ 389 (405)
T COG0520 311 YLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEK-GIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTE 389 (405)
T ss_pred HHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhC-CeEEEeccccccHHHHhcCCCCceEEEEeecCCH
Confidence 999999988 78887764 477888899887778887777665 8999999877532 244599996 7799
Q ss_pred HHHHHHHHHHHhh
Q 013521 428 EYISEACRRLKNF 440 (441)
Q Consensus 428 ~~~~~~l~~l~~~ 440 (441)
+|++++++.|+++
T Consensus 390 edid~l~~aL~~~ 402 (405)
T COG0520 390 EDVDRLLEALKKA 402 (405)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 139
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=6.1e-27 Score=230.78 Aligned_cols=334 Identities=15% Similarity=0.128 Sum_probs=219.1
Q ss_pred CCCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCC--CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKG--YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
++..+++|+.+++ ++...|.+.+++.+++.+++.... ...+.......+|++.+|+++ +. +.+++++|+++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g~--~~~~~~~sG~~ 125 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----GF--ESCLLCQSGWA 125 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----CC--CcEEEECCHHH
Confidence 3456889988875 677889999999999987643221 111222235678888899886 54 46678889999
Q ss_pred HHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCC
Q 013521 147 DISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNN 225 (441)
Q Consensus 147 al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~N 225 (441)
|+.. +..++.+||.|+++.+.|.++...+...| .+++.++..+-+.+...+ ...++++|++++|+|
T Consensus 126 An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g------------~~~~~~~~~d~~~l~~~l-~~~~~~lV~v~~v~n 192 (407)
T PRK07179 126 ANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAG------------AQAHPFRHNDVDHLRRQI-ERHGPGIIVVDSVYS 192 (407)
T ss_pred HHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCC------------CeEEEecCCCHHHHHHHH-HhcCCeEEEECCCCC
Confidence 9887 67788999999999999998877777776 355554432111111001 112467888889999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccc-ccCCCcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY-EIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~-~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
|||.++| +++|.++|++||+++|+||+|+....+....++. .++-.+..++++.|+||.+| + |+||+++++++
T Consensus 193 ~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~--~~G~l~~~~~~ 266 (407)
T PRK07179 193 TTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-G--RAGIITCPREL 266 (407)
T ss_pred CCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-c--cCeEEEeCHHH
Confidence 9999999 7889999999999999999998533332222222 22211223588999999996 2 69999998776
Q ss_pred cccCCchhHHHHHHHHhh-hcCCC-cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEE
Q 013521 305 RYSNGYPVIKDFNRIVCT-CFNGA-SNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVW 382 (441)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 382 (441)
+ +.+...... .+.++ ++....++.++++. ....+..+++++++++++.+.|+++|+++.. .+++++
T Consensus 267 ~--------~~~~~~~~~~~~~~t~~~~~~aa~~aal~~--~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~--~~~i~~ 334 (407)
T PRK07179 267 A--------EYVPFVSYPAIFSSTLLPHEIAGLEATLEV--IESADDRRARLHANARFLREGLSELGYNIRS--ESQIIA 334 (407)
T ss_pred H--------HHHHHhCcCeeeCCCCCHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCEEE
Confidence 3 333322111 12222 22222223333431 1122457788999999999999988877653 567888
Q ss_pred EEcCCCChHHHHHHHHHhcCeEEeCCCC-cCCCCCCeEEEEee--cCHHHHHHHHHHHHhh
Q 013521 383 VQFPGSSSWDVFAEILEKTHILTIPGSG-FGPGGNEHIRVSAF--GHREYISEACRRLKNF 440 (441)
Q Consensus 383 ~~~~~~~~~~~~~~ll~~~gi~v~pg~~-f~~~~~~~iRls~~--~~~~~~~~~l~~l~~~ 440 (441)
+.++.....+.+...+.++||.+..-.. ..+.+.+++||++. .+++++++++++|+++
T Consensus 335 l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~ 395 (407)
T PRK07179 335 LETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREA 395 (407)
T ss_pred EEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 8875322334444445556998432100 01223579999984 4899999999999875
No 140
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=1.4e-26 Score=224.79 Aligned_cols=314 Identities=15% Similarity=0.125 Sum_probs=208.2
Q ss_pred CCCCCcHHHHHHHHHHHhhccCCCC---CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCC
Q 013521 82 TTQPIPDIITSAMAEHAFALSTVKG---YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGS 157 (441)
Q Consensus 82 ~~~~~~~~~~~al~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~ 157 (441)
++.+..+.+.+++.+.-..+...+. ...+...+-..++++.+|+++ |+ +++++|+|+++++.+ +..++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----GM--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 4456677777777776643332111 111112234678899999986 66 799999999999997 6777899
Q ss_pred CCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----C-------CCccEEEEcCCCC
Q 013521 158 NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----T-------SRTDIIFFCSPNN 225 (441)
Q Consensus 158 gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~-------~~~~~v~i~~p~N 225 (441)
||+|+++.++|.+....+...| .+++.++.+.++.+..+++. . ++++++++++|+|
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n 150 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAG------------LNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDG 150 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcC------------CEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCC
Confidence 9999999999888877777777 58899988765433333221 1 3688999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccc
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELR 305 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~ 305 (441)
|||...+ +++|+++|+++|+++|+|++|..... +.+...+ +..++++|+||+++ ++.|+||++++++++
T Consensus 151 ~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~---~~~~~~~----~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~ 219 (361)
T cd06452 151 NYGNLHD---AKKIAKVCHEYGVPLLLNGAYTVGRM---PVSGKEL----GADFIVGSGHKSMA-ASAPIGVLATTEEWA 219 (361)
T ss_pred CCeeecc---HHHHHHHHHHcCCeEEEECCcccCCc---CCCHHHc----CCCEEEecCCcccc-CCCCeEEEEECHHHH
Confidence 9998877 88999999999999999999983211 2222222 34599999999997 667999999988774
Q ss_pred ccCCchhHHHHHHHHhh------h-cCCCc-HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--
Q 013521 306 YSNGYPVIKDFNRIVCT------C-FNGAS-NIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNG-- 374 (441)
Q Consensus 306 ~~~~~~~~~~~~~~~~~------~-~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-- 374 (441)
+.+...... . ..+.+ ...+.++.+.+.. ..++++...+ ..++++++.+.|+++ |+++..
T Consensus 220 --------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~-~~~~~~~l~~~L~~l~g~~v~~~~ 289 (361)
T cd06452 220 --------DIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPH-VKERVKRWDE-EVEKARWFVAELEKIEGIKQLGEK 289 (361)
T ss_pred --------HHHhccccccccceeeeeccccCchHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHhcCCCeEEECCC
Confidence 333322211 0 00111 1112222333321 0122333222 234457889999988 888762
Q ss_pred CCCceEEEEEcCCC---------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe-ecCHHHHHHHHHHHHhh
Q 013521 375 GKNAPYVWVQFPGS---------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA-FGHREYISEACRRLKNF 440 (441)
Q Consensus 375 ~~~~~~~~~~~~~~---------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~-~~~~~~~~~~l~~l~~~ 440 (441)
+...+++.++.+.. ...++.+.|+++ ||.+.+ ....+++|++. ..++++++.+++.|+++
T Consensus 290 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~-----~~~~~~~ri~~~g~~~e~~~~l~~al~~~ 359 (361)
T cd06452 290 PKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKR-GIHGIK-----PGLTRYFKLSTYGLTWEQVEYVVDAFKEI 359 (361)
T ss_pred CCCCceEEEEcCCcchhhhhccccchhHHHHHHHc-CceEEc-----CCCceEEEEEecCCCHHHHHHHHHHHHHH
Confidence 34566777776521 122466777654 998532 22345899997 45899999999999875
No 141
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=1.1e-26 Score=228.64 Aligned_cols=334 Identities=18% Similarity=0.180 Sum_probs=221.5
Q ss_pred CCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCC--CCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGY--KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al 148 (441)
.++++|+.+++ ++..+|.+.+++.+.+.+++..... .-|+......+|++++|+++ +. ++.+++++| +++.
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~----g~-~~~l~~~sG-~~an 118 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH----GK-ESALVFTSG-YVAN 118 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh----CC-CeEEEECch-HHHH
Confidence 46899999985 6788999999999999876532211 12333445678888888886 53 456666666 4454
Q ss_pred H-HHHHhcC--CCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCC
Q 013521 149 S-RLQMLLG--SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSP 223 (441)
Q Consensus 149 ~-~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p 223 (441)
. ++..+.. +++.|+.....|......+...| .++..++..+...+..-+.. ..++++|++++|
T Consensus 119 ~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g------------~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~ 186 (402)
T TIGR01821 119 DATLATLAKIIPGCVIFSDELNHASMIEGIRHSG------------AEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESV 186 (402)
T ss_pred HHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcC------------CeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 4 3554443 77777777667766666666555 34444443211111000111 135789999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC-CcceeEEEecCCcccCCccceeEEEEeec
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG-AREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
+||||.+.+ +++|.++|++||+++|+||+|+...+......+....+ .++.+++++||||.+|++| ||+++++
T Consensus 187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~ 260 (402)
T TIGR01821 187 YSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASR 260 (402)
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCH
Confidence 999999999 88999999999999999999984333322222222111 1233588999999999888 9999887
Q ss_pred cccccCCchhHHHHHHHHhh--hcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 303 ELRYSNGYPVIKDFNRIVCT--CFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
++ ++.+...... ...+.++..+.++.++++.... ...+++..+++++++.+.|+++|+++.++ .+++
T Consensus 261 ~~--------~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~i 329 (402)
T TIGR01821 261 KL--------IDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKE--SQDLRRAHQENVKRLKNLLEALGIPVIPN-PSHI 329 (402)
T ss_pred HH--------HHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCE
Confidence 76 3444432221 1223566677777777752111 14455667788999999999888877654 5667
Q ss_pred EEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 381 VWVQFPGS-SSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 381 ~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
+++.++.. ...++.+.+++++||.+.+..... +.+..++||++ ..++++++++++.|+++
T Consensus 330 ~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~ 393 (402)
T TIGR01821 330 VPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLV 393 (402)
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 77776531 245677777777799999865433 23457899997 56899999999999875
No 142
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.96 E-value=2.6e-26 Score=226.03 Aligned_cols=331 Identities=16% Similarity=0.148 Sum_probs=217.9
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcC----cHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH
Q 013521 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQG----NMALRTAIADKFYKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 74 ~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~ 149 (441)
.+.|..+.+. ++|+.+.+++.+.+..... .....|....+ ..++|+.+++++ ++++++|++++|+++++.
T Consensus 18 ~~yl~~~~~~-~~p~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ia~~~----~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPAGT-QIPQSVADAVSAALTRSNA-NRGGAYESSRRADQVVDDAREAVADLL----NADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCccC-CCCHHHHHHHHHHHHhcCC-CCCCCchHHHHHHHHHHHHHHHHHHHc----CCCCCeEEEeCCHHHHHH
Confidence 6888877665 4678899999998865421 11223543333 357777787775 777778999999999987
Q ss_pred H-HHH---hcCCCCEEEEeCCCchhhHh----HHHHhccccccccccCccceeEEeecCCCCCccCCCC---C--CCCcc
Q 013521 150 R-LQM---LLGSNVTVAVQDPSFPAYID----TSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS---T--TSRTD 216 (441)
Q Consensus 150 ~-l~~---l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~--~~~~~ 216 (441)
. +.. .+++||+|++.+|+|++... .++..| .+++.++.+.++ +..+++ . .++++
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g------------~~~~~~~~~~~~-~~~~~~~l~~~i~~~~~ 158 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAG------------AKVKWARVDEAT-GELHPDDLASLLSPRTR 158 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcC------------CEEEEEeccccC-CCcCHHHHHHhcCCCce
Confidence 6 333 36899999999999987643 334455 488888886532 223322 2 35789
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
++++++|+||||.+++ +++|+++|++||+++|+|+++.. ...+..+... +..+++.|++|++| .|+|
T Consensus 159 lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~---~~~~~~~~~~----~~d~~~~s~~K~~g---~~~G 225 (397)
T TIGR01976 159 LVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYA---PHGLIDVQAT----GADFLTCSAYKFFG---PHMG 225 (397)
T ss_pred EEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc---cccCCCHHHc----CCCEEEEechhhcC---CceE
Confidence 9999999999999998 88999999999999999999752 1112222222 33477899999985 3689
Q ss_pred EEEeeccccccCCchhHHH-HHH-HHhhhcCCCc---HHHHHHHHHhcCCCcH-----------HHHHHHHHHHHHHHHH
Q 013521 297 WTVVPEELRYSNGYPVIKD-FNR-IVCTCFNGAS---NIVQAGGLACLSPDGF-----------QALRTVIDYYKENAKI 360 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~---~~~~~a~~~~l~~~~~-----------~~~~~~~~~~~~~~~~ 360 (441)
|++++++++..-....... +.. .......+.+ ..+..+++..+.+.+. ..+++.+++..+.+++
T Consensus 226 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (397)
T TIGR01976 226 ILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEY 305 (397)
T ss_pred EEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 9999987742110000000 000 0000001122 2234444555543221 1256677777888889
Q ss_pred HHHHHHhC-CCeeeCC----CCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcC---------CCCCCeEEEEe--e
Q 013521 361 IVDAFQSL-GLKVNGG----KNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFG---------PGGNEHIRVSA--F 424 (441)
Q Consensus 361 l~~~L~~~-g~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---------~~~~~~iRls~--~ 424 (441)
+.+.|+++ ++++..+ ..++++.+.+++.+..++.++|. ++||.++.|..|. +...++||+|+ +
T Consensus 306 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 384 (397)
T TIGR01976 306 LLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLA-DQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHY 384 (397)
T ss_pred HHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHH-HCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeecc
Confidence 99999887 4877653 24667888777555666777665 4599999887653 12356899997 5
Q ss_pred cCHHHHHHHHHHH
Q 013521 425 GHREYISEACRRL 437 (441)
Q Consensus 425 ~~~~~~~~~l~~l 437 (441)
+++++++++++.|
T Consensus 385 ~t~~di~~l~~~l 397 (397)
T TIGR01976 385 NTAEEVDRLLEAL 397 (397)
T ss_pred CCHHHHHHHHHhC
Confidence 6899999998764
No 143
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=3.5e-27 Score=231.98 Aligned_cols=340 Identities=12% Similarity=0.097 Sum_probs=219.6
Q ss_pred CCCCeEEeCCCC--CCCC-CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCcH
Q 013521 70 PDARLIRLGIGD--TTQP-IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI-EGDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~~-~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~~ 145 (441)
.+++++||..|. ..+. .++.+.+++.+.+.+... ....|.++.+ .+|.+.+++++ +. ++++|++++|++
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~--~~~~~~~~~~-~~la~~l~~~~----~~~~~~~v~~~~sgs 113 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGH--VSNLFATEPQ-IALAERLVELL----GAPEGGRVFFCNSGA 113 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccC--ccCccCCHHH-HHHHHHHHHhC----CCCCCCEEEEeCchH
Confidence 356789998764 2333 478999999999986532 2234644322 45555555543 43 357999999999
Q ss_pred HHHHH-HHHhcCCC-CEEEEeCCCchhhHhHHHHhccc-cccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcC
Q 013521 146 SDISR-LQMLLGSN-VTVAVQDPSFPAYIDTSVIVGQA-GKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCS 222 (441)
Q Consensus 146 ~al~~-l~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~ 222 (441)
+++.. +..+..+| +.|+..+++|+++.......+.. ...........++..+|..+-+.+...+ .+++++|+++.
T Consensus 114 ea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~~aviiep 191 (398)
T PRK03244 114 EANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAV--DDDTAAVFLEP 191 (398)
T ss_pred HHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhh--cCCeEEEEEec
Confidence 99987 44333455 56777788999875544433211 0000000000123444432111111001 25788988888
Q ss_pred CCCccccCCCHHH-HHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 223 PNNPTGHAATWQQ-LKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 223 p~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
++||||.+++.++ +++|.++|++||+++|+||+|..|...+.........-.+| +.+|||.++ +|+|+||++++
T Consensus 192 ~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD----i~t~sK~l~-~G~~ig~~~~~ 266 (398)
T PRK03244 192 IQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD----VVTLAKGLG-GGLPIGACLAF 266 (398)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC----EEEEchhhh-CCcccEEEEEc
Confidence 8999999997655 99999999999999999999987655442211111111234 348899998 99999999999
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCee--eCCCCce
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKV--NGGKNAP 379 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~ 379 (441)
+++. +.+.........+.+++.+.++.+.++.... +...++.+++.+.+.+.|++++... .....|+
T Consensus 267 ~~~~--------~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~ 335 (398)
T PRK03244 267 GPAA--------DLLTPGLHGSTFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHPLVDHVRGRGL 335 (398)
T ss_pred HHHH--------hhccCCCCcCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccE
Confidence 8863 3343222333446788999999988762111 3455677777888888888764321 1123688
Q ss_pred EEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 380 YVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 380 ~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
++|+.++......+..++++ +||.+.|. +.+.||++. ..+++++++++++|.+++
T Consensus 336 ~~~i~~~~~~~~~~~~~l~~-~Gv~~~~~------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l 392 (398)
T PRK03244 336 LLGIVLTAPVAKAVEAAARE-AGFLVNAV------APDVIRLAPPLIITDAQVDAFVAALPAIL 392 (398)
T ss_pred EEEEEEeccHHHHHHHHHHH-CCeEEeec------CCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 99999964344566666665 59999873 246899995 458999999999998763
No 144
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=1.8e-26 Score=225.80 Aligned_cols=328 Identities=16% Similarity=0.172 Sum_probs=222.9
Q ss_pred CCcHHHHHHHHHHHhhcc-CCCCCCCCCCCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCcHHHHHH-HHHh-----cC
Q 013521 85 PIPDIITSAMAEHAFALS-TVKGYKGYGAEQGNMALRTAIADKFYKDMGI-EGDEIFISDGAQSDISR-LQML-----LG 156 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~-~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~~~al~~-l~~l-----~~ 156 (441)
++++.+.+++.+.+.... +....+.|+ ..+...+++++++++. .++. ++++|++|+|+++++++ +..+ .+
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~-~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~ 87 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYK-GINARDLDDIIITSCATESNNWVLKGVYFDEILK 87 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHH-HcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhccc
Confidence 466789999999887643 323333453 4577889999988864 3454 68999999999999997 4433 25
Q ss_pred C-CCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCccccCCC
Q 013521 157 S-NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPTGHAAT 232 (441)
Q Consensus 157 ~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPtG~~~~ 232 (441)
+ +++|++..+.|+++......+...| .+++.+++++++.++.+ +++ .++++++++++|+||||.++|
T Consensus 88 ~~~~~vi~~~~e~ps~~~~~~~~~~~G---------~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 88 GGKNHIITTEVEHPAVRATCAFLESLG---------VEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFP 158 (382)
T ss_pred CCCCEEEEcCCccHHHHHHHHHHHHCC---------CEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccC
Confidence 5 4789999888888766554332222 48889988754333222 222 357899999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchh
Q 013521 233 WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPV 312 (441)
Q Consensus 233 ~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~ 312 (441)
+++|.++|+++|+++++|+++.... .+..+.. .+..+++.|++|++|.+| +|++++++..... +..
T Consensus 159 ---~~~I~~la~~~g~~~ivD~a~~~g~---~~~~~~~----~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~--p~~ 224 (382)
T TIGR03403 159 ---IKEIGEICKERGVLFHTDAVQAIGK---IPVDVQK----AGVDFLSFSAHKFHGPKG--VGGLYIRKGVELT--PLF 224 (382)
T ss_pred ---HHHHHHHHHHcCCEEEEechhhcCC---CccCccc----cCCCEEEEcchhhCCCCc--eEEEEECCCCCCC--Ccc
Confidence 6788999999999999999977311 1222221 123488999999988677 6888776654200 000
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC---ceEEEEEcCCC
Q 013521 313 IKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKN---APYVWVQFPGS 388 (441)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~~~~~~~ 388 (441)
.. ..........+++.+.+.++.++++ ...++++...+++++.++++.+.|.++ ++.+..+.. .+++.+.+++.
T Consensus 225 ~g-~~~~~~~~~gt~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (382)
T TIGR03403 225 HG-GEHMGGRRSGTLNVPYIVAMGEAMR-LANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV 302 (382)
T ss_pred cC-CCCCCCcccCCcChHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC
Confidence 00 0000111123466667766666664 222346777889999999999999886 788775432 45777777766
Q ss_pred ChHHHHHHHHHhcCeEEeCCCCcCCC-----------------CCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 389 SSWDVFAEILEKTHILTIPGSGFGPG-----------------GNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 389 ~~~~~~~~ll~~~gi~v~pg~~f~~~-----------------~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
+..++...| .++||.++.|+.|... ..+.||+|+ +++++|++++++.|+++
T Consensus 303 ~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~ 372 (382)
T TIGR03403 303 EGEAMLWDL-NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKA 372 (382)
T ss_pred CHHHHHHhh-ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 666776664 5669999988765311 136799997 56899999999999865
No 145
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=2.4e-26 Score=224.66 Aligned_cols=337 Identities=18% Similarity=0.160 Sum_probs=221.6
Q ss_pred EeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCC----CcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcHHHHHH
Q 013521 76 RLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGA----EQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQSDISR 150 (441)
Q Consensus 76 ~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~----~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~~al~~ 150 (441)
.|+.+..++++|+.+.+++.+.+.......+...|.. ..+..++|+.+++++ +.+ +++|++|+|+++++.+
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~~~~~v~~~~g~t~al~~ 77 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF----NAPSSAHVVFTNNATTALNI 77 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHHHHHHH
Confidence 4556666677889999999998876431122233432 256678888998886 664 4599999999999987
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHH----HHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcC
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTS----VIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCS 222 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~ 222 (441)
+..++++||+|++..++|+++...+ +..| .+++.++.+.++.++++ ++. .++++++++++
T Consensus 78 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 145 (376)
T TIGR01977 78 ALKGLLKEGDHVITTPMEHNSVARPLECLKEQIG------------VEITIVKCDNEGLISPERIKRAIKTNTKLIVVSH 145 (376)
T ss_pred HHHhccCCCCEEEECcchhhHHHHHHHHHHHHcC------------cEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEEC
Confidence 6777899999999999998865433 3335 47888887654322221 211 35789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
|+||||.+++ +++|.++|+++|+++|+|++++.... +..+.. .+..+++.|++|+++.| -.+|.+++.+
T Consensus 146 ~~n~tG~~~~---~~~i~~l~~~~~~~livD~a~~~g~~---~~~~~~----~~~D~~~~s~~K~l~~p-~g~g~l~~~~ 214 (376)
T TIGR01977 146 ASNVTGTILP---IEEIGELAQENGIFFILDAAQTAGVI---PIDMTE----LAIDMLAFTGHKGLLGP-QGTGGLYIRE 214 (376)
T ss_pred CCCCccccCC---HHHHHHHHHHcCCEEEEEhhhccCcc---CCCchh----cCCCEEEecccccccCC-CCceEEEEcC
Confidence 9999999999 67889999999999999999974221 222211 23458999999988633 2467776655
Q ss_pred cccccCCch----hHH-HH---HHH-HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 013521 303 ELRYSNGYP----VIK-DF---NRI-VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKV 372 (441)
Q Consensus 303 ~~~~~~~~~----~~~-~~---~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 372 (441)
+........ ... .+ ... ......+.+.....+..++++.......+.++++.++..+.+.+.|.+. ++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~ 294 (376)
T TIGR01977 215 GIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKI 294 (376)
T ss_pred CcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 531000000 000 00 000 0011122333333333333331111123667778888889999999876 6777
Q ss_pred eCCC----CceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCC--------CCCCeEEEEe--ecCHHHHHHHHHHHH
Q 013521 373 NGGK----NAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGP--------GGNEHIRVSA--FGHREYISEACRRLK 438 (441)
Q Consensus 373 ~~~~----~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------~~~~~iRls~--~~~~~~~~~~l~~l~ 438 (441)
..+. .+..+++.+++.+..++...|.+++||.+.+|..+.. ...+.||+++ ..++++++.++++|+
T Consensus 295 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~ 374 (376)
T TIGR01977 295 YGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALS 374 (376)
T ss_pred eCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHh
Confidence 5431 2567888887666667777766556999999876642 2457899996 558999999999998
Q ss_pred h
Q 013521 439 N 439 (441)
Q Consensus 439 ~ 439 (441)
+
T Consensus 375 ~ 375 (376)
T TIGR01977 375 E 375 (376)
T ss_pred h
Confidence 6
No 146
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=5.7e-26 Score=220.31 Aligned_cols=321 Identities=13% Similarity=0.123 Sum_probs=207.8
Q ss_pred CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCC--cEEEcCCcHHHHHH-HHHhcCCCC
Q 013521 83 TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD--EIFISDGAQSDISR-LQMLLGSNV 159 (441)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~--~I~~t~G~~~al~~-l~~l~~~gd 159 (441)
+..+++.+.+++.+... .....|. .-..++|+.+++++ +++++ .|++++|+++++.. +..++.+||
T Consensus 7 p~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~la~~~----~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~ 75 (355)
T TIGR03301 7 PLSTSATVRDAMLVDWC-----HWDSEFN--DVTDQVRDRLLALA----GGDDNHTCVLLQGSGTFAVEATIGSLVPRDG 75 (355)
T ss_pred CCCCCHHHHHHhhhhcc-----CCCHHHH--HHHHHHHHHHHHHh----cCCCCCcEEEEeCCcHHHHHHHHHhccCCCC
Confidence 34566777777777221 1111232 34566777777765 77654 68889999999998 677788888
Q ss_pred EEEEeCCCchh--hHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC----CCCccEEEEcCCCCccccCCC
Q 013521 160 TVAVQDPSFPA--YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST----TSRTDIIFFCSPNNPTGHAAT 232 (441)
Q Consensus 160 ~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~----~~~~~~v~i~~p~NPtG~~~~ 232 (441)
.|++..+.+.+ +...+...| .+++.++.+.+...+.+ +++ .++++++++++++||||...+
T Consensus 76 ~vi~~~~~~~~~~~~~~a~~~g------------~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~ 143 (355)
T TIGR03301 76 KLLVLINGAYGERLAKICEYLG------------IPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP 143 (355)
T ss_pred eEEEECCCchhhHHHHHHHHcC------------CceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH
Confidence 87776665544 345566677 57888887643332222 221 245677888899999999988
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCc--
Q 013521 233 WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY-- 310 (441)
Q Consensus 233 ~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~-- 310 (441)
+++|+++|++|++++|+|++++.. ..+.++... +..++++|++|+++ ++.++||++++++.+..-..
T Consensus 144 ---~~~i~~l~~~~~~~livD~~~s~g---~~~~~~~~~----~~d~~~~s~~K~l~-~~~G~g~~~~~~~~~~~~~~~~ 212 (355)
T TIGR03301 144 ---LEAIAKVARSHGAVLIVDAMSSFG---AIPIDIEEL----DVDALIASANKCLE-GVPGFGFVIARRDLLEASAGNA 212 (355)
T ss_pred ---HHHHHHHHHHcCCEEEEEeccccC---Ccccchhhc----CccEEEecCCcccc-cCCceeEEEECHHHHHHhhCCC
Confidence 789999999999999999977632 113333222 34588999999873 33347999999887421000
Q ss_pred -----hhHHHHHHHH--hhhcCCCcHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC---Cce
Q 013521 311 -----PVIKDFNRIV--CTCFNGASNIVQAGGLACLSPDGFQ-ALRTVIDYYKENAKIIVDAFQSLGLKVNGGK---NAP 379 (441)
Q Consensus 311 -----~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~ 379 (441)
.....+.... .....+++.+.+.++.+.+...... ++++.+++++++++++.+.|+++|+++..++ ++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~ 292 (355)
T TIGR03301 213 RSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPI 292 (355)
T ss_pred CCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCc
Confidence 0000000000 1112345666655554444311111 2467778889999999999998888754332 345
Q ss_pred EEEEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee--cCHHHHHHHHHHHHhhC
Q 013521 380 YVWVQFPG---SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF--GHREYISEACRRLKNFL 441 (441)
Q Consensus 380 ~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~~~~~~l~~l~~~l 441 (441)
++|+.++. .+..++.+.+. ++||.+.||..+. .++|||++. .++++++++++.|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~-~~gi~i~~~~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 293 IVSFLYPDDPDFDFDDFYQELK-ERGFVIYPGKLTL---ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred EEEEECCCCCcchHHHHHHHHH-HCCEEEECCcccc---ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 68888874 23345556655 5599999987543 268999963 48999999999999875
No 147
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=5e-26 Score=208.04 Aligned_cols=305 Identities=16% Similarity=0.283 Sum_probs=203.0
Q ss_pred CCCC-CCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH--H-HHhc--CC----------CCEEEEeCCCchh
Q 013521 107 YKGY-GAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR--L-QMLL--GS----------NVTVAVQDPSFPA 170 (441)
Q Consensus 107 ~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~--l-~~l~--~~----------gd~Vlv~~p~y~~ 170 (441)
.-+| +...|++++|+-+|+.+ ++++++|++..+++-.+.. + ..++ -+ .-+.+++.|+|..
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~ll----gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDR 136 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELL----GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDR 136 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHH----TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HH
T ss_pred ccCCCCccCChHHHHHHHHHHh----CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchH
Confidence 3479 88889999999999997 9999999999888766542 3 2222 11 1268999999999
Q ss_pred hHhHHHHhccccccccccCccceeEEeecCCCCCccCCC-----CCCCCccEEEEcCC--CCccccCCCHHHHHHHHHH-
Q 013521 171 YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDL-----STTSRTDIIFFCSP--NNPTGHAATWQQLKKLVEF- 242 (441)
Q Consensus 171 ~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~-----~~~~~~~~v~i~~p--~NPtG~~~~~~~~~~i~~~- 242 (441)
...+.+.+| ++.+.||++++ +.+.|. ...+.+|.|+ |.| +||||.++|.+..++++++
T Consensus 137 HFai~E~~G------------iemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiW-cVP~ySNPtG~tySde~vrrlA~m~ 202 (425)
T PF12897_consen 137 HFAITEHFG------------IEMIPVPMTED-GPDMDMVEELVAEDPSVKGIW-CVPKYSNPTGITYSDEVVRRLAAMK 202 (425)
T ss_dssp HHHHHHHCT-------------EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEE-E-SSS-TTT-----HHHHHHHHHS-
T ss_pred HHHHHHhhC------------cEEEecCCCCC-CCCHHHHHHHHhcCCccceEE-eCCCccCCCCccCCHHHHHHHhcCC
Confidence 999999999 79999999876 433331 1247889988 556 9999999999999999988
Q ss_pred HHHcCcEEEEccccccccc-CCCC----Ccccc---cCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHH
Q 013521 243 AKANGSIIVYDSAYAAYIT-DPSP----RSIYE---IPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIK 314 (441)
Q Consensus 243 a~~~~~~ii~De~~~~~~~-~~~~----~~~~~---~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 314 (441)
+...++.|+.|++|.-... ++.+ ..+.. -.+.+++++...|.||+. +||-+++++.++++. ++
T Consensus 203 ~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~N--------l~ 273 (425)
T PF12897_consen 203 TAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEAN--------LA 273 (425)
T ss_dssp -SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHH--------HH
T ss_pred cCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHH--------HH
Confidence 3357999999999996555 2222 12332 246789999999999988 699999999999988 46
Q ss_pred HHHHHHhhhcCCCcHHHHHHHHHhcCCC--cH-HHHHHHHHHHHHHHHHHHHHHHhC-C-----CeeeCCCCceEEEEEc
Q 013521 315 DFNRIVCTCFNGASNIVQAGGLACLSPD--GF-QALRTVIDYYKENAKIIVDAFQSL-G-----LKVNGGKNAPYVWVQF 385 (441)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~-~~~~~~~~~~~~~~~~l~~~L~~~-g-----~~~~~~~~~~~~~~~~ 385 (441)
.+.........+..-+.|..-..++.+. +. .|+++.++.++-+.+.+.+.|++. | .++..|.+|+|+++++
T Consensus 274 ~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~ 353 (425)
T PF12897_consen 274 WIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDV 353 (425)
T ss_dssp HHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEE
T ss_pred HHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEec
Confidence 6776667677778999999999999864 33 688898999998888888887754 3 4788889999999999
Q ss_pred CCCChHHHHHHHHHhcCeEEeC-CCCcCC---CCCCeEEEEe-ecCHHHHHHHHHHHHh
Q 013521 386 PGSSSWDVFAEILEKTHILTIP-GSGFGP---GGNEHIRVSA-FGHREYISEACRRLKN 439 (441)
Q Consensus 386 ~~~~~~~~~~~ll~~~gi~v~p-g~~f~~---~~~~~iRls~-~~~~~~~~~~l~~l~~ 439 (441)
..... ..+.++.++.||.+.| |..|-. +.+..|||+- +.+.++++.+++.+.-
T Consensus 354 ~~G~A-krvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~ 411 (425)
T PF12897_consen 354 LDGTA-KRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFAT 411 (425)
T ss_dssp STT-H-HHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHH
T ss_pred CCChH-HHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHH
Confidence 86454 4456667778999999 777731 2367899995 5578999999998864
No 148
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.95 E-value=1.1e-25 Score=220.85 Aligned_cols=326 Identities=13% Similarity=0.076 Sum_probs=222.4
Q ss_pred CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCC-CcEEEcCCcHHHHHH-HHHhcCCCCE
Q 013521 83 TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEG-DEIFISDGAQSDISR-LQMLLGSNVT 160 (441)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~I~~t~G~~~al~~-l~~l~~~gd~ 160 (441)
+...++.+.+++.+.. . +| ...+..++++.+++.+.+.++.++ +.+++++|+++++.. +..++++||+
T Consensus 17 P~~~~~~V~~a~~~~~--------~-~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~ 86 (401)
T PLN02409 17 PVNIPERVLRAMNRPN--------E-DH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDK 86 (401)
T ss_pred CCCCCHHHHHHhcCCC--------C-CC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCE
Confidence 3456788877775522 1 22 244678888888888877677765 478899999999987 6778899999
Q ss_pred EEEeCCCchhhH--hHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--C----CCccEEEEcCCCCccccCC
Q 013521 161 VAVQDPSFPAYI--DTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--T----SRTDIIFFCSPNNPTGHAA 231 (441)
Q Consensus 161 Vlv~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~----~~~~~v~i~~p~NPtG~~~ 231 (441)
|++.+++|++.. ..++..| .+++.++.+.+..+.++ +++ . +++++|++++++||||.++
T Consensus 87 Vlv~~~~~~~~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~ 154 (401)
T PLN02409 87 VVSFRIGQFSLLWIDQMQRLN------------FDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTN 154 (401)
T ss_pred EEEeCCCchhHHHHHHHHHcC------------CceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccC
Confidence 999999997763 4555566 58888888754333222 211 1 3789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCc-
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY- 310 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~- 310 (441)
|.+++.++++ |+++|+++|+|++++. ...+..+.. .+.++++.|.+|+++. +.++||++++++.+..-..
T Consensus 155 ~~~~i~~l~~-~~~~g~~~vvD~v~s~---g~~~id~~~----~~~D~~~~s~~K~l~~-P~G~G~l~~~~~~~~~~~~~ 225 (401)
T PLN02409 155 DLAGVRKLLD-CAQHPALLLVDGVSSI---GALDFRMDE----WGVDVALTGSQKALSL-PTGLGIVCASPKALEASKTA 225 (401)
T ss_pred CHHHHHHHHh-hhccCcEEEEEccccc---CCccccccc----cCccEEEEcCccccCc-CCCcceeEECHHHHHHHhcC
Confidence 9666666655 9999999999999872 111222211 2345888888999963 3479999999887421000
Q ss_pred ----hhHH--HHHHHHhh--h-cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC----C
Q 013521 311 ----PVIK--DFNRIVCT--C-FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGK----N 377 (441)
Q Consensus 311 ----~~~~--~~~~~~~~--~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~ 377 (441)
.... ........ . ..+++...+.++.++++......++++++++++.++++.+.|++.|+++..+. .
T Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s 305 (401)
T PLN02409 226 KSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRS 305 (401)
T ss_pred CCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcc
Confidence 0000 00001001 1 22345555555555554211234688889999999999999998888876532 2
Q ss_pred ceEEEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 378 APYVWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 378 ~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
...+|+.++ +.+..++...+++++||.+.+|.. ......|||+. +.+.+++..++.+|+++|
T Consensus 306 ~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~--~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l 370 (401)
T PLN02409 306 DTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLN--KVAGKVFRIGHLGNVNELQLLGALAGVEMVL 370 (401)
T ss_pred cceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCC--cccCCEEEEcCCCCCCHHHHHHHHHHHHHHH
Confidence 234678876 456667888888899999999863 33467899995 458899999999998753
No 149
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.95 E-value=6.7e-26 Score=221.26 Aligned_cols=321 Identities=17% Similarity=0.119 Sum_probs=211.8
Q ss_pred CCcHHHHHHHHHHHhhccCCCC--CCCCCC--CcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcHHHHHH-HHHhcC--
Q 013521 85 PIPDIITSAMAEHAFALSTVKG--YKGYGA--EQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQSDISR-LQMLLG-- 156 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~--~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~~al~~-l~~l~~-- 156 (441)
++|+.+.+++.+.+......+. ..++.+ .....++|+.+++++ +.+ +++|++|+|+++++.+ +..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~~~~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI----NAPSPDEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CCCCCCeEEEeCCHHHHHHHHHHHhhhcC
Confidence 4668899999988865432111 111111 234567888888886 666 7899999999999987 566666
Q ss_pred -CCCEEEEeCCCchhhHhH----HHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCccc
Q 013521 157 -SNVTVAVQDPSFPAYIDT----SVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPTG 228 (441)
Q Consensus 157 -~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPtG 228 (441)
+||+|++++++|++.... ++..| .+++.++.+.++..+++ +++ .+++++|++++|+||||
T Consensus 86 ~~g~~vl~~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG 153 (373)
T cd06453 86 KPGDEIVTSVMEHHSNIVPWQQLAERTG------------AKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLG 153 (373)
T ss_pred CCCCEEEECcchhHHHHHHHHHHHhhcC------------cEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccC
Confidence 899999999999885333 33445 58888888744322221 221 35889999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccC
Q 013521 229 HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN 308 (441)
Q Consensus 229 ~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~ 308 (441)
.+++ +++|+++|++||++|++|++|+.... +..+... +..+++.|++|.++ + .++||++++++++..-
T Consensus 154 ~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~---~~~~~~~----~~d~~~~s~~K~~~-~-~g~g~~~~~~~~~~~~ 221 (373)
T cd06453 154 TINP---VKEIGEIAHEAGVPVLVDGAQSAGHM---PVDVQDL----GCDFLAFSGHKMLG-P-TGIGVLYGKEELLEEM 221 (373)
T ss_pred CcCC---HHHHHHHHHHcCCEEEEEhhhhcCce---eeecccc----CCCEEEeccccccC-C-CCcEEEEEchHHhhcC
Confidence 9999 77899999999999999999873221 2222221 23477889999997 4 6799999988774221
Q ss_pred CchhH-----HH----HHHHH----hhhcCCCcHHHH---HHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 013521 309 GYPVI-----KD----FNRIV----CTCFNGASNIVQ---AGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLK 371 (441)
Q Consensus 309 ~~~~~-----~~----~~~~~----~~~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 371 (441)
..... .. ..... .....+++.... .+++..+.+.+ ++.++++.++.++++.+.|+++ +++
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g---~~~~~~~~~~~~~~l~~~l~~~~~~~ 298 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIG---MEAIAAHEHELTAYALERLSEIPGVR 298 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 10000 00 00000 000112333333 33333343333 3677788888899999999887 677
Q ss_pred eeCC--CCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcC------CCCCCeEEEEee--cCHHHHHHHHHHH
Q 013521 372 VNGG--KNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFG------PGGNEHIRVSAF--GHREYISEACRRL 437 (441)
Q Consensus 372 ~~~~--~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~------~~~~~~iRls~~--~~~~~~~~~l~~l 437 (441)
+..+ ..+.++++.+++.+..++.+.+.+ +||.+.+|..+. ....++||+++. +++++++++++.|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 299 VYGDAEDRAGVVSFNLEGIHPHDVATILDQ-YGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EeCCccccCCeEEEEECCcCHHHHHHHHHH-CCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 7532 235678888876556666666654 699999887543 123579999974 5899999998864
No 150
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=1.5e-25 Score=220.79 Aligned_cols=334 Identities=13% Similarity=0.156 Sum_probs=219.4
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCC-----CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcH-
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGA-----EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQ- 145 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~- 145 (441)
..+++++.+.++.+.|+.+.++..++ . . ..+|.+ ..|..++++++++++.+.++.+.++++++++++
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~-~-----~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~ 92 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN-E-----F-YTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATA 92 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc-c-----C-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHH
Confidence 45799999999998888877767665 1 1 123444 679999999999999887787777887777555
Q ss_pred HHHHHH-HHhcCC--CCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEE
Q 013521 146 SDISRL-QMLLGS--NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIF 219 (441)
Q Consensus 146 ~al~~l-~~l~~~--gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~ 219 (441)
++...+ ..++.+ ||+|++++|.|+.+...+..+|.+.. .+++.++.+++...+++ +++ .+++++|+
T Consensus 93 ~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g--------~~~~~v~~~~~~~~d~~~l~~~i~~~t~~vi 164 (398)
T cd00613 93 AAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLG--------IEVVEVPSDEGGTVDLEALKEEVSEEVAALM 164 (398)
T ss_pred HHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCC--------cEEEEeccCCCCCcCHHHHHHhcCCCeEEEE
Confidence 444443 444565 99999999999999888887773221 36777777543222111 221 36789999
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCc----ccee
Q 013521 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFT----GVRL 295 (441)
Q Consensus 220 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~----G~r~ 295 (441)
+++|+ |||.+. +.+++|.++|++||+++|+|+++..... +.... ..+.++++.|+||++ +| |+|+
T Consensus 165 v~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~---~~~~~----~~~~d~~~~s~~K~~-~p~g~Ggp~~ 233 (398)
T cd00613 165 VQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTG---LKPPG----EYGADIVVGNLQKTG-VPHGGGGPGA 233 (398)
T ss_pred EECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccC---CCChH----HcCCCEEEeeccccC-CCCCCCCCce
Confidence 98885 899994 3469999999999999999998753221 11111 123459999999998 46 7999
Q ss_pred EEEEeeccccccCCchhH----------------H------HHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHH
Q 013521 296 GWTVVPEELRYSNGYPVI----------------K------DFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY 353 (441)
Q Consensus 296 G~l~~~~~~~~~~~~~~~----------------~------~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 353 (441)
||++++++++........ . ++.........+.+...+.++..+.. .....+++++++
T Consensus 234 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~-~~~~g~~~~~~~ 312 (398)
T cd00613 234 GFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVY-LGPEGLKEIAER 312 (398)
T ss_pred eEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHH-hCHHHHHHHHHH
Confidence 999998876422100000 0 00000011111122333443333332 233456788899
Q ss_pred HHHHHHHHHHHHHhCCCeeeCCCCceE--EEEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecC
Q 013521 354 YKENAKIIVDAFQSLGLKVNGGKNAPY--VWVQFPG---SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGH 426 (441)
Q Consensus 354 ~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~ 426 (441)
++++++++.+.|++++... .+.+..+ ++++++. .+..++...|+++ ||.+.+.. +...+.||++. +++
T Consensus 313 ~~~~~~~l~~~L~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~-gi~~~~~~---~~~~~~lRis~~~~~t 387 (398)
T cd00613 313 AHLNANYLAKRLKEVGGVL-PFNGPFFHEFVLRLPPLYGIRAEDLAKALIDG-GFHAPTMY---LPVDGTLMIEPTETET 387 (398)
T ss_pred HHHHHHHHHHHHHhcCCcc-cCCCCeeEEEEEEcCCcchHHHHHHHHhhhhc-Cccccccc---cCCCCeEEEEcCCCCC
Confidence 9999999999999875433 2223333 6777763 2355677776654 88764421 23457899995 669
Q ss_pred HHHHHHHHHHH
Q 013521 427 REYISEACRRL 437 (441)
Q Consensus 427 ~~~~~~~l~~l 437 (441)
+++++++++.|
T Consensus 388 ~edid~~~~~L 398 (398)
T cd00613 388 KEELDALLEAL 398 (398)
T ss_pred HHHHHHHHHhC
Confidence 99999998864
No 151
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.95 E-value=1.3e-25 Score=222.35 Aligned_cols=339 Identities=14% Similarity=0.132 Sum_probs=214.7
Q ss_pred CCCCeEEeCCC--CCCCC-CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIG--DTTQP-IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g--~~~~~-~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.+.++||+..| ...+. .++.+.+++.+.+... ..|....+..++...+++.+.+.++.+.++|++++|+++
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgse 107 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL------THFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTE 107 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC------cCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHH
Confidence 35678999876 33343 7889999999988642 133322234455555555554444667899999999999
Q ss_pred HHHH-HHHh--cCCCCEEEEeCCCchhhHhHHHHhcccc----ccccccCccceeEEeecCCCC----CccCCCC-----
Q 013521 147 DISR-LQML--LGSNVTVAVQDPSFPAYIDTSVIVGQAG----KFLKETGKYRNIVYMNCRPEN----NFFPDLS----- 210 (441)
Q Consensus 147 al~~-l~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~----~~~~~~~~~~~v~~v~~~~~~----~~~~~~~----- 210 (441)
|+.. +..+ ..+++.|++.+++|++........+... .+.... .++..+|.+... .+..+++
T Consensus 108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 184 (413)
T cd00610 108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL---PGVLHVPYPYRYRPPAELADDLEALEEA 184 (413)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC---CCcEEeCCCccccchhhHHHHHHHHHHH
Confidence 9987 4333 3678999999999999755554433210 000000 235556554210 1111211
Q ss_pred --CC-CCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCC
Q 013521 211 --TT-SRTDIIFFCSP-NNPTGHAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFS 285 (441)
Q Consensus 211 --~~-~~~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 285 (441)
.. .++++ ++++| +|++|.++ +.+.+++|.++|++||+++|+||+|..+...+.........-.++ +.|+|
T Consensus 185 l~~~~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d----~~t~s 259 (413)
T cd00610 185 LEEHPEEVAA-VIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPD----IVTLG 259 (413)
T ss_pred HhcCCCCEEE-EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCC----eEEEc
Confidence 11 24445 44566 77779877 677799999999999999999999997643332211111211122 45899
Q ss_pred cccCCccceeEEEEeeccccccCCchhHHHH--HHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Q 013521 286 KFAGFTGVRLGWTVVPEELRYSNGYPVIKDF--NRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVD 363 (441)
Q Consensus 286 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 363 (441)
|.++ .|+|+||++++++++ +.+ .........+.+++.+.++.+.++... . ..+.++++++.+.+.+
T Consensus 260 K~l~-~g~~~g~~~~~~~~~--------~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~-~--~~~~~~~~~~~~~l~~ 327 (413)
T cd00610 260 KGLG-GGLPLGAVLGREEIM--------DAFPAGPGLHGGTFGGNPLACAAALAVLEVLE-E--EGLLENAAELGEYLRE 327 (413)
T ss_pred cccc-CccccEEEEEcHHHH--------HhhccCCCCCCCCCCcCHHHHHHHHHHHHHHH-h--ccHHHHHHHHHHHHHH
Confidence 9998 689999999987763 332 222222344567788887777764211 1 3455666677777777
Q ss_pred HHHhC----CCeeeCCCCceEEEEEcCCC---------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHH
Q 013521 364 AFQSL----GLKVNGGKNAPYVWVQFPGS---------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHRE 428 (441)
Q Consensus 364 ~L~~~----g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~ 428 (441)
.|++. ++.......|.++|+.++.. ....+.+.+++ +||.+.|+. .+.+|+++ ..+++
T Consensus 328 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~v~~~~------~~~lR~~~~~~~t~~ 400 (413)
T cd00610 328 RLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALE-RGLLLRPSG------GNVIRLLPPLIITEE 400 (413)
T ss_pred HHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHH-CCeEEeecC------CCEEEEECCCcCCHH
Confidence 77654 22222234678889888632 23455666555 599999974 46899985 45899
Q ss_pred HHHHHHHHHHhhC
Q 013521 429 YISEACRRLKNFL 441 (441)
Q Consensus 429 ~~~~~l~~l~~~l 441 (441)
++++++++|.+++
T Consensus 401 ~i~~~~~~l~~~l 413 (413)
T cd00610 401 EIDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999875
No 152
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.95 E-value=3.1e-25 Score=215.60 Aligned_cols=295 Identities=11% Similarity=0.080 Sum_probs=199.0
Q ss_pred cHHHHHHHHHHHhhhCCCCCC--cEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhh--HhHHHHhccccccccccCc
Q 013521 116 NMALRTAIADKFYKDMGIEGD--EIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAY--IDTSVIVGQAGKFLKETGK 190 (441)
Q Consensus 116 ~~~lr~~ia~~l~~~~~~~~~--~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~ 190 (441)
..++|+.++++ ++++++ +|++|+|++++++. +..++.+||.+++..+++++. ...++..|
T Consensus 37 ~~~~r~~la~l----~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g----------- 101 (363)
T TIGR02326 37 VEQIRQQLLAL----ATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLG----------- 101 (363)
T ss_pred HHHHHHHHHHH----hCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcC-----------
Confidence 34456666665 477654 79999999999998 577888888888877766554 35556667
Q ss_pred cceeEEeecCCCCCccCC-CC----CCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC
Q 013521 191 YRNIVYMNCRPENNFFPD-LS----TTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSP 265 (441)
Q Consensus 191 ~~~v~~v~~~~~~~~~~~-~~----~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~ 265 (441)
.+++.++.++++..+++ ++ ..++++++.+++++||||..+| +++|+++|++||+++|+|++++ + +..+
T Consensus 102 -~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~-~--g~~~ 174 (363)
T TIGR02326 102 -IPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSS-F--GGIP 174 (363)
T ss_pred -CceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccc-c--cCcc
Confidence 58888888754433322 21 1245677888899999999999 7899999999999999999876 2 2224
Q ss_pred CcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCc-------hhHHHHHHHH---hhhcCCCcHHHHHHH
Q 013521 266 RSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY-------PVIKDFNRIV---CTCFNGASNIVQAGG 335 (441)
Q Consensus 266 ~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~a~ 335 (441)
.++..+ +..++++|++|+++ ++.++||++++++.+..... .....+.... .....+.+.+.+.+.
T Consensus 175 ~~~~~~----~~D~~~~s~~K~l~-~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al 249 (363)
T TIGR02326 175 IDIAEL----HIDYLISSANKCIQ-GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAF 249 (363)
T ss_pred cchhhc----CccEEEecCccccc-cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHH
Confidence 444333 23488999999884 44458999998876421000 0000011110 001123566666665
Q ss_pred HHhcCCCcHH-HHHHHHHHHHHHHHHHHHHHHhCCCeeeCC---CCceEEEEEcCC---CChHHHHHHHHHhcCeEEeCC
Q 013521 336 LACLSPDGFQ-ALRTVIDYYKENAKIIVDAFQSLGLKVNGG---KNAPYVWVQFPG---SSSWDVFAEILEKTHILTIPG 408 (441)
Q Consensus 336 ~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg 408 (441)
.+++...... .+++.+++++++++++.+.|+++|+....+ ..+..+|+.++. .+..++.+.+. ++||.+.||
T Consensus 250 ~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~-~~gi~v~~g 328 (363)
T TIGR02326 250 AQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLK-EQGFVIYPG 328 (363)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHHH-HCCEEEECC
Confidence 5555421111 246678999999999999999888877543 234457888874 34455666654 559999999
Q ss_pred CCcCCCCCCeEEEEe-e-cCHHHHHHHHHHHHhhC
Q 013521 409 SGFGPGGNEHIRVSA-F-GHREYISEACRRLKNFL 441 (441)
Q Consensus 409 ~~f~~~~~~~iRls~-~-~~~~~~~~~l~~l~~~l 441 (441)
..+ ..++||+++ + .+.+++++++++|++++
T Consensus 329 ~~~---~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 329 KVS---QVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred cCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 765 247899995 3 48999999999998864
No 153
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=4.7e-25 Score=217.22 Aligned_cols=335 Identities=16% Similarity=0.169 Sum_probs=220.0
Q ss_pred CCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCC--CCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGY--KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al 148 (441)
.++++|+.+++ ++..+|.+.+++.+.+.+++..... ..++...-..+|.+.+|+++ +. +..+++++|++...
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g~-~~~~~~~SG~~An~ 119 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLH----GK-EAALLFTSGYVSNW 119 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHh----CC-CcEEEeCCcHHHHH
Confidence 46899999985 5667899999999999876531111 11222224567788888775 53 45677777765333
Q ss_pred HHHHHhcC--CCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCC
Q 013521 149 SRLQMLLG--SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPN 224 (441)
Q Consensus 149 ~~l~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~ 224 (441)
.++..+.. +||.|++....|......+...| .++..++..+...+...+.. .+++++|++++++
T Consensus 120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g------------~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~ 187 (406)
T PRK13393 120 AALSTLGSRLPGCVILSDELNHASMIEGIRHSR------------AEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVY 187 (406)
T ss_pred HHHHHhhcCCCCCEEEEccchhHHHHHHHHHcC------------CeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCC
Confidence 33554544 78888887778877777776666 35555554221111111111 1357888888999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC-CcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG-AREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
||+|.+.+ +++|.++|++||+++|+||+|+...++.....+....+ .++.+|.++||||.+|++| ||++++++
T Consensus 188 ~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~ 261 (406)
T PRK13393 188 SMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAA 261 (406)
T ss_pred CCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHH
Confidence 99999999 88899999999999999999984333322222222211 1223588899999999888 99998877
Q ss_pred ccccCCchhHHHHHHHHhh--hcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEE
Q 013521 304 LRYSNGYPVIKDFNRIVCT--CFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYV 381 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 381 (441)
+ .+.+...... ...+.+++.+.++.++++.... . ...+++++++++++.+.|++.|+++.+ ..++++
T Consensus 262 ~--------~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~-~-~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~i~ 330 (406)
T PRK13393 262 L--------CDFIRSFASGFIFTTSLPPAVAAGALASVRHLKA-S-SAERERHQDRVARLRARLDKAGIPHLP-NPSHIV 330 (406)
T ss_pred H--------HHHHHHhCcCceecCccCHHHHHHHHHHHHHHhh-C-HHHHHHHHHHHHHHHHHHHHcCCCcCC-CCCCeE
Confidence 6 3444433221 1233556667777777752111 1 223466788899999999888877654 356666
Q ss_pred EEEcCC-CChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 382 WVQFPG-SSSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 382 ~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
.+.++. ....++.+.|++++||.+.++.... +.+.++|||++ ..+++++++++++|+++
T Consensus 331 ~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~ 393 (406)
T PRK13393 331 PVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEI 393 (406)
T ss_pred EEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 666642 1235677777766799999875432 33457899996 46899999999999875
No 154
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=3.8e-25 Score=216.84 Aligned_cols=333 Identities=17% Similarity=0.196 Sum_probs=209.2
Q ss_pred CCCeEEeCCCC--CC-CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGD--TT-QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~--~~-~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..|. .. -..+|.+.+++.+.+.+..... ..| ..+...++.+.+++. . ..+++++++|+++|
T Consensus 30 G~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~--~~~-~~~~~~~la~~l~~~----~--~~~~v~~~~sGseA 100 (389)
T PRK01278 30 GERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVS--NLY-RIPEQERLAERLVEN----S--FADKVFFTNSGAEA 100 (389)
T ss_pred CCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccc--ccc-CChHHHHHHHHHHhh----C--CCCEEEEcCCcHHH
Confidence 45688887653 11 1367899999999887532111 112 122233444444443 2 34799999999999
Q ss_pred HHH-HHHh----cCCCC----EEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCCCccCCCCC--CCCc
Q 013521 148 ISR-LQML----LGSNV----TVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPENNFFPDLST--TSRT 215 (441)
Q Consensus 148 l~~-l~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~ 215 (441)
+.. +... .++|| +|++.+++|+++...+...+....+.. .......+..++..+ ..++++ .+++
T Consensus 101 ~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~~l~~~l~~~~ 176 (389)
T PRK01278 101 VECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGD----IEALKAAITPNT 176 (389)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCC----HHHHHHhhCCCe
Confidence 986 4332 35666 899999999998766655542211000 000000111122110 001111 2478
Q ss_pred cEEEEcCCCCccc-cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccce
Q 013521 216 DIIFFCSPNNPTG-HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVR 294 (441)
Q Consensus 216 ~~v~i~~p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r 294 (441)
++|+++.++||+| .++|.+.+++|.++|++||+++|+||+|..+...+.........-.+| +.||||.++ +|+|
T Consensus 177 ~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~G~~ 251 (389)
T PRK01278 177 AAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD----IMAVAKGIG-GGFP 251 (389)
T ss_pred EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC----EEEEehhcc-CCcc
Confidence 8888876688998 789999999999999999999999999998755443222111111233 458999998 9999
Q ss_pred eEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCC---CcH-HHHHHHHHHHHHHHHHHHHHHHhCC-
Q 013521 295 LGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSP---DGF-QALRTVIDYYKENAKIIVDAFQSLG- 369 (441)
Q Consensus 295 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~-~~~~~~~~~~~~~~~~l~~~L~~~g- 369 (441)
+||+++++++. +.+.........+.+++.|.++.+.++. ... ++++++.+.++++.+.+.+ ++.
T Consensus 252 ig~~~~~~~~~--------~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~ 320 (389)
T PRK01278 252 LGACLATEEAA--------KGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVD---RFPD 320 (389)
T ss_pred eEEEEEcHHHH--------hccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh---hCCC
Confidence 99999998763 3333333334445788999988777752 111 3344444444444443322 221
Q ss_pred C-eeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 370 L-KVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 370 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
+ .... ..|.++|++++. +..++..+++++ ||.+.|+. .+++||+. ..+++++++++++|++++
T Consensus 321 ~~~~v~-g~G~~~~i~~~~-~~~~~~~~l~~~-GV~~~p~~------~~~lR~~p~~~~~~~~i~~~l~~l~~~l 386 (389)
T PRK01278 321 VIEEVR-GKGLLLGLKCVV-PNRDLVQALRDE-GLLTVGAG------DNVVRLLPPLIITEEEIDEALERLERAA 386 (389)
T ss_pred ceeeEe-cccEEEEEEEec-CHHHHHHHHHHC-CeEEeecC------CCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 2 2222 367888888753 567788888876 99999863 57899984 468999999999998764
No 155
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=7.5e-25 Score=213.68 Aligned_cols=331 Identities=15% Similarity=0.133 Sum_probs=221.0
Q ss_pred EeCCCCC-CCCCcHHHHHHHHHHHhhccCCCC--CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHH
Q 013521 76 RLGIGDT-TQPIPDIITSAMAEHAFALSTVKG--YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQ 152 (441)
Q Consensus 76 ~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~ 152 (441)
||+.+++ .+...|.+.++..+++++++.... ...|+...+..+|++++|+++ +.+ +.+++++|.++++.++.
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~----g~e-~al~~~sG~~a~~~~i~ 76 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL----GTE-SAILYSDGASTTSSTVA 76 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh----CCC-cEEEecCcHHHHHHHHH
Confidence 5566654 456778999999999988653221 224777778999999999997 544 78999999999998888
Q ss_pred HhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC---CC---------CCCCccEEEE
Q 013521 153 MLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD---LS---------TTSRTDIIFF 220 (441)
Q Consensus 153 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~---~~---------~~~~~~~v~i 220 (441)
.++++||.|+++++.|+++...+...+ .+++.++..+.+++... +. ..+++++|++
T Consensus 77 ~l~~~GD~Vl~~~~~h~s~~~~~~l~~------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~ 144 (392)
T PLN03227 77 AFAKRGDLLVVDRGVNEALLVGVSLSR------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVV 144 (392)
T ss_pred HhCCCCCEEEEeccccHHHHHHHHHcC------------CeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEE
Confidence 899999999999999999887776655 36666665432221111 11 1136788888
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccccc-CCCCCccccc---CCCcceeEEEecCCcccCCccceeE
Q 013521 221 CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYIT-DPSPRSIYEI---PGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 221 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~-~~~~~~~~~~---~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
.+++||+|.+.+ +++|.++|++||+++|+||+|. +.. +.......+. ....+.+|++.|+||.+|.. .|
T Consensus 145 E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg 217 (392)
T PLN03227 145 EGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GG 217 (392)
T ss_pred cCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---Cc
Confidence 889999999999 7889999999999999999998 332 2211122221 11124468899999987644 48
Q ss_pred EEEeeccccccCCchhHHHHHHHHhhhcCCC--cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCee--
Q 013521 297 WTVVPEELRYSNGYPVIKDFNRIVCTCFNGA--SNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKV-- 372 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-- 372 (441)
+++++++++ +.+.........+. +++.+.++.+.+..... .+.++++++++.+++.+.|++.++..
T Consensus 218 ~v~~~~~~~--------~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 287 (392)
T PLN03227 218 MTVGSEEVV--------DHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYAL 287 (392)
T ss_pred EEecCHHHH--------HHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 988887763 33332222222222 35566666655542111 25677888999999999998643321
Q ss_pred --------eCCCCceEEEEEcCCCC----------hHHHHHHHHHhcCeEEeCCCC-----cCCCCCCeEEEEe--ecCH
Q 013521 373 --------NGGKNAPYVWVQFPGSS----------SWDVFAEILEKTHILTIPGSG-----FGPGGNEHIRVSA--FGHR 427 (441)
Q Consensus 373 --------~~~~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~v~pg~~-----f~~~~~~~iRls~--~~~~ 427 (441)
.....++.+.+.+.+.. ..++.+.+++ +|+.+.+... +....+..||+++ ..++
T Consensus 288 ~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~ 366 (392)
T PLN03227 288 KLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLS-EGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTR 366 (392)
T ss_pred ccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHH-CCCEEEecccccCCcCCCCCCceEEEEecCCCCH
Confidence 11234667777775311 1255555555 5999875211 1112256799997 4489
Q ss_pred HHHHHHHHHHHhhC
Q 013521 428 EYISEACRRLKNFL 441 (441)
Q Consensus 428 ~~~~~~l~~l~~~l 441 (441)
++++++++.|++++
T Consensus 367 eei~~~~~~l~~~~ 380 (392)
T PLN03227 367 EDIDKLLTVLGEAV 380 (392)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998763
No 156
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=3.9e-25 Score=215.34 Aligned_cols=320 Identities=14% Similarity=0.115 Sum_probs=203.9
Q ss_pred CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCC--CcEEEcCCcHHHHHH-HHHhcCCCC
Q 013521 83 TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEG--DEIFISDGAQSDISR-LQMLLGSNV 159 (441)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~--~~I~~t~G~~~al~~-l~~l~~~gd 159 (441)
+.++++.+.+++.+... .....|. .-..++|+.+++.+ +.++ +.|++|+|+++++.. +..++.+||
T Consensus 13 P~~~~~~~~~a~~~~~~-----~~~~~~~--~~~~~~~~~l~~l~----~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~ 81 (368)
T PRK13479 13 PLTTSRTVREAMLRDWG-----SWDDDFN--ALTASVRAKLVAIA----TGEEGYTCVPLQGSGTFSVEAAIGSLVPRDG 81 (368)
T ss_pred CCCCCHHHHHHhCCCCC-----CCChHHH--HHHHHHHHHHHHHh----CCCCCceEEEEcCCcHHHHHHHHHhccCCCC
Confidence 34566777766655321 1111121 24566777777765 6654 568899999999997 678889999
Q ss_pred EEEEeCCCchhhH--hHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC----CCCccEEEEcCCCCccccCCC
Q 013521 160 TVAVQDPSFPAYI--DTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST----TSRTDIIFFCSPNNPTGHAAT 232 (441)
Q Consensus 160 ~Vlv~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~----~~~~~~v~i~~p~NPtG~~~~ 232 (441)
.|+++.++|.+.. ..++..| .+++.++.+.+..++++ +++ .++++++++++|+||||...|
T Consensus 82 ~vlv~~~~~~~~~~~~~~~~~g------------~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 82 KVLVPDNGAYGARIAQIAEYLG------------IAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP 149 (368)
T ss_pred eEEEEeCCchHHHHHHHHHHcC------------CcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC
Confidence 9999988887753 5666667 58888888654333222 221 245678999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCccc-CCccceeEEEEeeccccccCCch
Q 013521 233 WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFA-GFTGVRLGWTVVPEELRYSNGYP 311 (441)
Q Consensus 233 ~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-~~~G~r~G~l~~~~~~~~~~~~~ 311 (441)
+++|.++|+++|+++|+|+++. +. ..+.++... +..+++.|++|.+ |.+| +||++++++.+..-...
T Consensus 150 ---~~~i~~l~~~~~~~livDa~~~-~g--~~~~~~~~~----~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~ 217 (368)
T PRK13479 150 ---LDEIAAVAKRHGKRLIVDAMSS-FG--AIPIDIAEL----GIDALISSANKCIEGVPG--FGFVIARRSELEACKGN 217 (368)
T ss_pred ---HHHHHHHHHHcCCEEEEEcccc-cC--Ccccccccc----CceEEEecCccccccCCC--ceEEEECHHHHHHhhcC
Confidence 7889999999999999997654 32 223333332 2348889999976 5566 79999998774210000
Q ss_pred ----hHHHHHHHH-----hhhcCCCcHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC--c-
Q 013521 312 ----VIKDFNRIV-----CTCFNGASNIVQAGGLACLSPDG-FQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKN--A- 378 (441)
Q Consensus 312 ----~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~--~- 378 (441)
..+...... .....+++.+.+.++.+++.... ..++++.+++++++++.+.+.|+++|+++..++. .
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 297 (368)
T PRK13479 218 SRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSP 297 (368)
T ss_pred CCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCc
Confidence 000000000 01112344444433333333110 1124677789999999999999998887653321 1
Q ss_pred eEEEEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 379 PYVWVQFPG---SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 379 ~~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
..+.+.++. .+..++.+.+.++ ||.+.+|..+ ..+++|++. +.++++++++++.|++++
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~L~~~-gi~v~~g~~~---~~~~iRis~~~~~t~edi~~~l~~L~~~l 361 (368)
T PRK13479 298 IIVTFHAPADPAYDFKEFYERLKEQ-GFVIYPGKLT---QVDTFRIGCIGDVDAADIRRLVAAIAEAL 361 (368)
T ss_pred eEEEEECCCCCCcCHHHHHHHHHHC-CEEEecCCCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 223334432 3456677776655 9999998643 246899985 348999999999998753
No 157
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=2.5e-24 Score=210.50 Aligned_cols=324 Identities=15% Similarity=0.115 Sum_probs=215.3
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCC---CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKG---YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al 148 (441)
.+.|+|+.-.-..|+++.+.+++.+........+. ...+.......++|+.+|+++ +. +++++|+|+++++
T Consensus 18 ~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g~--~~~~~~~g~t~a~ 91 (387)
T PRK09331 18 EEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----GM--DEARVTHGAREGK 91 (387)
T ss_pred ccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHH
Confidence 35777775555557889999999998855432111 223333456889999999996 55 4688999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC------------CCCc
Q 013521 149 SR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST------------TSRT 215 (441)
Q Consensus 149 ~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~------------~~~~ 215 (441)
.+ +..++++||+|+++.++|.+....+...| .+++.++.+.+.++..+.+. .+++
T Consensus 92 ~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G------------~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 159 (387)
T PRK09331 92 FAVMHSLCKKGDYVVLDGLAHYTSYVAAERAG------------LNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPP 159 (387)
T ss_pred HHHHHHhcCCCCEEEECCCchHHHHHHHHHcC------------CEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCC
Confidence 87 67788999999999999998887777777 58888888311122233211 1378
Q ss_pred cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcccee
Q 013521 216 DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRL 295 (441)
Q Consensus 216 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~ 295 (441)
++|++++|+||||...+ +++|+++|++||+++|+|++|+.... |.+...+ +..+++.|++|+++ ++.|+
T Consensus 160 ~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~---~~~~~~~----g~D~~~~s~~K~l~-~~~~~ 228 (387)
T PRK09331 160 ALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRM---PVDGKKL----GADFIVGSGHKSMA-ASAPS 228 (387)
T ss_pred EEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCCc---CCCHHHc----CCCEEEeeCccccc-CCCCE
Confidence 99999999999999888 88999999999999999999983211 2232222 33589999999997 66799
Q ss_pred EEEEeeccccccCCchhHHHHHHHHh-h-----h-cC-CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 013521 296 GWTVVPEELRYSNGYPVIKDFNRIVC-T-----C-FN-GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQS 367 (441)
Q Consensus 296 G~l~~~~~~~~~~~~~~~~~~~~~~~-~-----~-~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 367 (441)
||++++++++ +.+.+... . . .. +.+.....++.+.+. ...+.++ ..++..++.+++.+.|++
T Consensus 229 G~l~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~-~~~~~~~-~~~~~~~~~~~l~~~L~~ 298 (387)
T PRK09331 229 GVLATTEEYA--------DKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFP-HVVERVK-RWDEEVKKARWFVDELEK 298 (387)
T ss_pred EEEEECHHHH--------hhcccccCCCcccceeeeceecCchHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHhc
Confidence 9999988764 22221110 0 0 00 111111121222222 0011222 344556677889999999
Q ss_pred C-CCeeeC--CCCceEEEEEcCCC---------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe-ecCHHHHHHHH
Q 013521 368 L-GLKVNG--GKNAPYVWVQFPGS---------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA-FGHREYISEAC 434 (441)
Q Consensus 368 ~-g~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~-~~~~~~~~~~l 434 (441)
+ |+++.. +...+++.++.+.. ...++.+.|. ++||...+. .....+|+.. +.+++++++++
T Consensus 299 l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gI~~~~~-----~~~~i~ri~~~g~t~~di~~l~ 372 (387)
T PRK09331 299 IEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELK-KRGIHGIKP-----GATKEFKLSTYGLTWEQVEYVA 372 (387)
T ss_pred CCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHH-HcCceEEcc-----CCceEEEEEeccCCHHHHHHHH
Confidence 8 998873 23455666665521 1133556654 569984332 2345677775 45899999999
Q ss_pred HHHHhh
Q 013521 435 RRLKNF 440 (441)
Q Consensus 435 ~~l~~~ 440 (441)
+.|+++
T Consensus 373 ~aL~~i 378 (387)
T PRK09331 373 DAFKEI 378 (387)
T ss_pred HHHHHH
Confidence 999875
No 158
>PRK07049 methionine gamma-lyase; Validated
Probab=99.94 E-value=8.8e-25 Score=214.62 Aligned_cols=223 Identities=13% Similarity=0.156 Sum_probs=162.4
Q ss_pred CCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHH----Hhcccc
Q 013521 108 KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSV----IVGQAG 182 (441)
Q Consensus 108 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~ 182 (441)
.+|+ ++-...|++.||++. + .+++++++|+++++.+ +..++++||.|+++.|+|+++...+. ..|
T Consensus 78 ~R~~-~Pt~~~Le~~lA~le----g--~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G--- 147 (427)
T PRK07049 78 SRFN-HPNSEIVEDRLAVYE----G--AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG--- 147 (427)
T ss_pred cCCC-CcCHHHHHHHHHHHh----C--CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC---
Confidence 4564 456789999999985 3 4578888888889887 67889999999999999999877643 345
Q ss_pred ccccccCccceeEEeecCCC-CCccCCCC---CCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHH---cCcEEEEccc
Q 013521 183 KFLKETGKYRNIVYMNCRPE-NNFFPDLS---TTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKA---NGSIIVYDSA 255 (441)
Q Consensus 183 ~~~~~~~~~~~v~~v~~~~~-~~~~~~~~---~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~---~~~~ii~De~ 255 (441)
++++.++...+ ..+...+. ..+++++|++++|+||||.+++.+++.+|++.|+. +++++|+||+
T Consensus 148 ---------i~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDet 218 (427)
T PRK07049 148 ---------VGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNT 218 (427)
T ss_pred ---------cEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECC
Confidence 35555542111 01110011 12578999999999999999999988888888654 7899999999
Q ss_pred ccccccCCCCCcccccCCCcceeEEEecCCcccC-CccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHH
Q 013521 256 YAAYITDPSPRSIYEIPGAREVAIEISSFSKFAG-FTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAG 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 334 (441)
|...... .++ .. +..+++.||||.+| .+|+|+||+++++++ .+.+...+.....+.+++.+.+
T Consensus 219 y~~~~~~---~pl-~~----g~divv~S~SK~~gG~~glr~G~vv~~~~l--------~~~l~~~~~~~g~~ls~~~a~l 282 (427)
T PRK07049 219 LLGPVFQ---KPL-EH----GADLSVYSLTKYVGGHSDLVAGAVLGRKAL--------IRQVRALRSAIGTQLDPHSCWM 282 (427)
T ss_pred ccccccC---Ccc-cc----CCCEEEEcCceeecCCCCcEEEEEECCHHH--------HHHHHHHHHhcCCCCCHHHHHH
Confidence 8754321 122 11 23588889999999 699999999988776 4566666665556688888887
Q ss_pred HHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 013521 335 GLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GL 370 (441)
Q Consensus 335 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 370 (441)
+...++ .+..+.++.+++++.+.+.|+++ ++
T Consensus 283 ~~r~L~-----tl~~R~~~~~~~a~~la~~L~~~p~V 314 (427)
T PRK07049 283 LGRSLE-----TLVLRMERANRNARAVAEFLRDHPKV 314 (427)
T ss_pred HHcCCC-----hHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 766664 23555566689999999999987 44
No 159
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=1.4e-24 Score=212.28 Aligned_cols=326 Identities=17% Similarity=0.181 Sum_probs=208.0
Q ss_pred CCcHHHHHHHHHHHhhccCCCC-CCCCCC--CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhc---CC
Q 013521 85 PIPDIITSAMAEHAFALSTVKG-YKGYGA--EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLL---GS 157 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~-~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~---~~ 157 (441)
+.|+.+.+++.+.+......+. ...+.. ..-..++|+.+++++ ++++++|++|+|+++++++ +..++ .+
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~i~~t~~~t~a~~~al~~~~~~~~~ 85 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLL----GAEPDEIIFTSGGTESDNTAIKSALAAQPE 85 (379)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCcHHHHHHHHHHHHHHhcCC
Confidence 5678899999988764311011 111100 112456666777665 8889999999999999987 54443 46
Q ss_pred CCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCccccCCCHH
Q 013521 158 NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPTGHAATWQ 234 (441)
Q Consensus 158 gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPtG~~~~~~ 234 (441)
||.|++...+|+++...+......| .+++.++.+.++..+.+ +++ .++++++++++++||||.++|
T Consensus 86 ~~~vv~~~~~~~s~~~~~~~~~~~G---------~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~-- 154 (379)
T TIGR03402 86 KRHIITTAVEHPAVLSLCQHLEKQG---------YKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFP-- 154 (379)
T ss_pred CCeEEEcccccHHHHHHHHHHHHcC---------CEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc--
Confidence 7899999999988766555442222 48888888654322221 221 367899999999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHH
Q 013521 235 QLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIK 314 (441)
Q Consensus 235 ~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 314 (441)
+++|.++|++||+++++|++++. +..+..+... +..+++.|.+|.+|.+| +|+++++++.... +....
T Consensus 155 -~~~I~~l~~~~g~~vivD~~~~~---g~~~~~~~~~----~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~--p~~~g 222 (379)
T TIGR03402 155 -IEEIGEIAKERGALFHTDAVQAV---GKIPIDLKEM----NIDMLSLSGHKLHGPKG--VGALYIRKGTRFR--PLLRG 222 (379)
T ss_pred -HHHHHHHHHHcCCEEEEECcccc---cccccCcccC----CCCEEEEcHHHcCCCCc--eEEEEECCCCCCC--CcccC
Confidence 67899999999999999999973 1113333222 33488889999776555 8888877654211 00000
Q ss_pred HHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCC---ceEEEEEcCCCC
Q 013521 315 DFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQS-L-GLKVNGGKN---APYVWVQFPGSS 389 (441)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~~~~ 389 (441)
.... ......+.+.....+..++++ ...++++...++.++.++.+.+.|.+ + ++.+..+.. ...+.+.+++.+
T Consensus 223 ~~~~-~~~~~gt~~~~~~~~l~~al~-~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T TIGR03402 223 GHQE-RGRRAGTENVPGIVGLGKAAE-LATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE 300 (379)
T ss_pred CccC-CCcCCCCccHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC
Confidence 0000 001122233334333344443 11245677778888899999999875 5 666654322 113333334445
Q ss_pred hHHHHHHHHHhcCeEEeCCCCcCCCC-----------------CCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 390 SWDVFAEILEKTHILTIPGSGFGPGG-----------------NEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 390 ~~~~~~~ll~~~gi~v~pg~~f~~~~-----------------~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
..++... |+++||.+.+|..|.... .+.||+|+ +++++|++++++.|+++
T Consensus 301 ~~~~~~~-l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~ 369 (379)
T TIGR03402 301 GEAILLL-LDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPI 369 (379)
T ss_pred HHHHHHh-hccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 5666665 466799999998875331 36899997 56899999999999875
No 160
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=3.1e-24 Score=209.61 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=216.3
Q ss_pred CCCeEEeCCCCC---CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDT---TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~---~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..|.. --..++.+.+++.+.+.+... . ......++++++++++.+..+ .+.++++++++++
T Consensus 28 G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~------~-~~~~~~~~~~~la~~l~~~~~--~~~~~~~~sG~~a 98 (377)
T PRK02936 28 GKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH------V-SNLFTNSLQEEVASLLAENSA--GDLVFFCNSGAEA 98 (377)
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc------c-ccccCCHHHHHHHHHHHhcCC--CCEEEEeCCcHHH
Confidence 567899888862 123778899999999875321 1 122446789999999865333 3589999999999
Q ss_pred HHHHHHh---cCCCCEEEEeCCCchhhHhH-HHHhccccc---cccccCccceeEEeecCCCCCccCCCCCCCCccEEEE
Q 013521 148 ISRLQML---LGSNVTVAVQDPSFPAYIDT-SVIVGQAGK---FLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFF 220 (441)
Q Consensus 148 l~~l~~l---~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~---~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i 220 (441)
+.....+ ...++.|++.+++|++.... ....+.... +.+.. .++..++.++...+...+ .++++++++
T Consensus 99 ~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~l~~~~--~~~~~~ii~ 173 (377)
T PRK02936 99 NEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLL---PGFTHVPFNDIKALKEVM--NEEVAAVML 173 (377)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCC---CCceEeCCCCHHHHHHhc--cCCeEEEEE
Confidence 8863232 23346799999999875322 222221110 00000 122333322111111101 256788887
Q ss_pred cCCCCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEE
Q 013521 221 CSPNNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV 299 (441)
Q Consensus 221 ~~p~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~ 299 (441)
..+++++|.. .+.+.+++|.++|++||+++|+||+|..|...+.+.+.....-.+| +.+|||.++ +|+|+||++
T Consensus 174 e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l~-~G~~ig~v~ 248 (377)
T PRK02936 174 EVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD----IVTVAKGLG-NGIPVGAMI 248 (377)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc----EEEEccccc-CCCccEEEE
Confidence 7779999977 5889999999999999999999999988766553322222321233 347999999 999999999
Q ss_pred eeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC--CCeee--CC
Q 013521 300 VPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL--GLKVN--GG 375 (441)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~ 375 (441)
+++++. +.+.........+.+++.|.++.++++.... +...++++++.+.+.+.|++. ++... ..
T Consensus 249 ~~~~~~--------~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 317 (377)
T PRK02936 249 GKKELG--------TAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIR 317 (377)
T ss_pred EcHHHH--------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe
Confidence 988773 3443222233445789999999999863211 334566667777777777653 22211 11
Q ss_pred CCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 376 KNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
..|+++|++++.. ...+.. .+.++||.+.|+ +.+++||+. ..+++++++++++|++++
T Consensus 318 ~~g~~~~i~~~~~-~~~~~~-~l~~~gv~v~~~------g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 318 GKGLMIGIECTEE-VAPVIE-QLREEGLLVLSA------GPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ecceEEEEEecch-HHHHHH-HHHHCCeEEecC------CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 3678999999742 444555 455669999874 257899994 668999999999999875
No 161
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.94 E-value=1.3e-24 Score=213.73 Aligned_cols=333 Identities=14% Similarity=0.144 Sum_probs=211.1
Q ss_pred CCCeEEeCCC---CCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIG---DTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g---~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..| .+--..+|.+.+++.+.+.+..... . .+. ..-..++.+.+++. .+ .+.+++++++++|
T Consensus 39 G~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~-~-~~~-~~~~~~l~~~l~~~----~~--~~~~~~~~sGseA 109 (403)
T PRK05093 39 GKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHIS-N-VFT-NEPALRLAKKLIDA----TF--AERVFFANSGAEA 109 (403)
T ss_pred CCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCccc-C-ccC-CHHHHHHHHHHHhh----CC--CCEEEEeCchHHH
Confidence 5678998776 2212377899999999887532111 1 111 11123444555443 22 3688888888888
Q ss_pred HHHHHHhc---------CCCCEEEEeCCCchhhHhHHHHh-ccc---cccccccCccceeEEeecCCCCCccCCCCCCCC
Q 013521 148 ISRLQMLL---------GSNVTVAVQDPSFPAYIDTSVIV-GQA---GKFLKETGKYRNIVYMNCRPENNFFPDLSTTSR 214 (441)
Q Consensus 148 l~~l~~l~---------~~gd~Vlv~~p~y~~~~~~~~~~-g~~---~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~ 214 (441)
......+. ...+.|+..+-+|++....+... +.. ..+.+.. .+++.++..+-+.+...+ .++
T Consensus 110 ~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~l~~~l--~~~ 184 (403)
T PRK05093 110 NEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKP---ADITHVPFNDLAAVKAVI--DDH 184 (403)
T ss_pred HHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCC---CCcEEeCCCCHHHHHHHh--cCC
Confidence 77532222 12357888888888864332222 210 0000000 123334332111111111 246
Q ss_pred ccEEEEcCCCCccccCC--CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcc
Q 013521 215 TDIIFFCSPNNPTGHAA--TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTG 292 (441)
Q Consensus 215 ~~~v~i~~p~NPtG~~~--~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G 292 (441)
+++|+++ |.||+|-++ +.+.+++|+++|++||+++|+||+|..+.+.+.+.+.....-.++ +.||||.++ +|
T Consensus 185 ~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~s~sK~l~-~G 258 (403)
T PRK05093 185 TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD----ILTSAKALG-GG 258 (403)
T ss_pred eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC----EEEeccccc-CC
Confidence 7776664 888888765 899999999999999999999999998766654332222221233 568999998 99
Q ss_pred ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC---
Q 013521 293 VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG--- 369 (441)
Q Consensus 293 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--- 369 (441)
+|+||+++++++. +.+.........+.+++.|.++.+.|+... -....+.++++++++.+.|++++
T Consensus 259 ~rig~vv~~~~i~--------~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~ 327 (403)
T PRK05093 259 FPIGAMLTTAEIA--------SHFKVGTHGSTYGGNPLACAVAEAVFDIIN---TPEVLEGVKARRQRFVDGLQKINQKY 327 (403)
T ss_pred cceEEEEEcHHHH--------hhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999998873 334322233344578899988888764211 13456888899999999998762
Q ss_pred -CeeeCCCCceEEEEEcCCC---ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 370 -LKVNGGKNAPYVWVQFPGS---SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 370 -~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+....+..|.++|+.++.. ...+++..++++ ||.+.|+ +.+++|++ +..+++++++++++|.+++
T Consensus 328 ~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~-Gv~v~~~------g~~~lRl~~~~~~~~~~i~~~~~~l~~~l 398 (403)
T PRK05093 328 GVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEE-GVMVLVA------GPDVLRFAPSLVIEEADIDEGLARFEKAV 398 (403)
T ss_pred CCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHC-CeEEecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 2222334688999998632 355777777765 9999874 34789996 4558999999999998753
No 162
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.94 E-value=2.4e-24 Score=214.92 Aligned_cols=337 Identities=19% Similarity=0.213 Sum_probs=217.3
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHH---hhhCCCCCCcEEEcCCcHHHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKF---YKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l---~~~~~~~~~~I~~t~G~~~al~ 149 (441)
.+++++.|.++...|..+.+++... ... ..+..|.+. -...++++++++. .+.++++++++++|+|+++++.
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~-~~~---~~y~~~~~~-~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~ 143 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRS-EFY---TAYTPYQPE-ISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAE 143 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhch-hHH---HhcCCCCCc-cchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHH
Confidence 5788999998887777766555432 111 122222221 2344666666443 5566888889999999999998
Q ss_pred H-HHHh-cCCCCEEEEeCCCchhhHhHHHHhcc-ccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCC
Q 013521 150 R-LQML-LGSNVTVAVQDPSFPAYIDTSVIVGQ-AGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSP 223 (441)
Q Consensus 150 ~-l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p 223 (441)
. +.++ ..+||+|++.++.|+.+...+..++. .| .+++.++.+++ ..+.+ +++ .+++++|++++|
T Consensus 144 ~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G---------~~~~~v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p 213 (447)
T PRK00451 144 AALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQG---------IEVVEVPYEDG-VTDLEALEAAVDDDTAAVVVQYP 213 (447)
T ss_pred HHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCC---------cEEEEecCCCC-CCCHHHHHHhcCCCeEEEEEECC
Confidence 7 4555 47999999999999998877765311 11 48888888753 32221 221 367999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEE--cccccccccCCCCCcccccCCCcceeEEEe---cCCcccCCccceeEEE
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVY--DSAYAAYITDPSPRSIYEIPGAREVAIEIS---SFSKFAGFTGVRLGWT 298 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~--De~~~~~~~~~~~~~~~~~~~~~~~~i~i~---S~SK~~~~~G~r~G~l 298 (441)
||||.+.+ +++|.++|+++|+++++ |.+... . ... ++..+.++++. +|||.++++|+|+||+
T Consensus 214 -n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g--~---~~~----~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l 280 (447)
T PRK00451 214 -NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLG--L---LKP----PGEYGADIVVGEGQPLGIPLSFGGPYLGFF 280 (447)
T ss_pred -CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhc--c---CCC----cccCCCCEEEECCCcCCCCCCCCCCCchHH
Confidence 89999987 88999999999999988 433211 0 000 11223446666 6777777889999999
Q ss_pred EeeccccccCCch--------------------hHHHHHHHHhhhcCCCcHHHH-HHHHHhcCCCcHHHHHHHHHHHHHH
Q 013521 299 VVPEELRYSNGYP--------------------VIKDFNRIVCTCFNGASNIVQ-AGGLACLSPDGFQALRTVIDYYKEN 357 (441)
Q Consensus 299 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~ 357 (441)
+++++++...... .....+........+.+...+ .++...+...+...+++.++++.++
T Consensus 281 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~ 360 (447)
T PRK00451 281 ATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQK 360 (447)
T ss_pred HhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9988775321000 000011111111112222223 2232222212234578899999999
Q ss_pred HHHHHHHHHhC-CCeeeCCCCceEEE--EEcCCCChHHHHHHHHHhcCeE-EeCCCCcCCCCCCeEEEEe--ecCHHHHH
Q 013521 358 AKIIVDAFQSL-GLKVNGGKNAPYVW--VQFPGSSSWDVFAEILEKTHIL-TIPGSGFGPGGNEHIRVSA--FGHREYIS 431 (441)
Q Consensus 358 ~~~l~~~L~~~-g~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~gi~-v~pg~~f~~~~~~~iRls~--~~~~~~~~ 431 (441)
++++.+.|+++ |+++. .+++|.+ ++++ ....++.++|+++ ||. ..+++.|.+...+++|+++ .+++++++
T Consensus 361 ~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~-~~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~ 436 (447)
T PRK00451 361 AHYLAERLAEIGGVELF--DGPFFNEFVVRLP-KPAEEVNEALLEK-GILGGYDLGRYYPELGNHLLVCVTEKRTKEDID 436 (447)
T ss_pred HHHHHHHHhhcCCEEec--CCCeEEEEEEecC-CCHHHHHHHHHhc-CCCCCcccccccCCcCCEEEEecCCCCCHHHHH
Confidence 99999999988 67765 3444543 5554 3567888888776 665 4566666554467999997 46899999
Q ss_pred HHHHHHHhhC
Q 013521 432 EACRRLKNFL 441 (441)
Q Consensus 432 ~~l~~l~~~l 441 (441)
++++.|++++
T Consensus 437 ~l~~~L~~~~ 446 (447)
T PRK00451 437 ALVAALGEVL 446 (447)
T ss_pred HHHHHHHHHh
Confidence 9999998763
No 163
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=4.1e-24 Score=209.16 Aligned_cols=220 Identities=18% Similarity=0.179 Sum_probs=160.6
Q ss_pred CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHH-----Hhccccccc
Q 013521 112 AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSV-----IVGQAGKFL 185 (441)
Q Consensus 112 ~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~~ 185 (441)
+.+-..+|++.+|++. +. +.+++++|+++|+.+ +..++++||+|+++.|.|+++...+. ..|
T Consensus 74 ~~Pt~~~LE~~lA~l~----g~--~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G------ 141 (418)
T PLN02242 74 FNPTVLNLGRQMAALE----GT--EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCN------ 141 (418)
T ss_pred CChhHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccC------
Confidence 3556788999999985 43 567789999999987 67889999999999999998866653 234
Q ss_pred cccCccceeEEeecCCCCCccCCCCCCC-CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC
Q 013521 186 KETGKYRNIVYMNCRPENNFFPDLSTTS-RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS 264 (441)
Q Consensus 186 ~~~~~~~~v~~v~~~~~~~~~~~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~ 264 (441)
.+++.++.++.+.+. ... .+ ++++|++++|+||||.+++ +++|+++|++||++||+|++|.++.+.
T Consensus 142 ------~~~~~~d~~d~e~l~-~~i-~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~-- 208 (418)
T PLN02242 142 ------ITTTFVDITDLEAVK-KAV-VPGKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLS-- 208 (418)
T ss_pred ------ceEEEcCCCCHHHHH-Hhc-CcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCC--
Confidence 366666543111111 111 24 5899999999999999987 889999999999999999999865542
Q ss_pred CCcccccCCCcceeEEEecCCcccCCccce-eEEEEeeccccccCCchhHHHHHHHHh--hhcCCCcHHHHHHHHHhcCC
Q 013521 265 PRSIYEIPGAREVAIEISSFSKFAGFTGVR-LGWTVVPEELRYSNGYPVIKDFNRIVC--TCFNGASNIVQAGGLACLSP 341 (441)
Q Consensus 265 ~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r-~G~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~ 341 (441)
+. .+ +.+|++.||||.++.+|.+ .||++++++++ +.+...+. ....+.+...|.|++.+...
T Consensus 209 ~~---~~----g~divv~S~SK~l~g~g~~~gG~iv~~~~li--------~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l 273 (418)
T PLN02242 209 PA---RL----GADVVVHSISKFISGGADIIAGAVCGPAELV--------NSMMDLHHGALMLLGPTMNPKVAFELSERL 273 (418)
T ss_pred HH---Hc----CCcEEEEeCccccCCCCCceEEEEEcCHHHH--------HHHHHHhhhhhhccCCCCCHHHHHHHHcCC
Confidence 11 22 2459999999999888887 59999888773 44544433 12334555667766666543
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 013521 342 DGFQALRTVIDYYKENAKIIVDAFQSLGLKVNG 374 (441)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 374 (441)
. .+..+.++++++++.+.+.|+++++++..
T Consensus 274 ~---tl~~r~~~~~~~a~~la~~L~~~~~~V~y 303 (418)
T PLN02242 274 P---HLSLRMKEHCRRAMEYAKRMKELGLKVIY 303 (418)
T ss_pred C---cHHHHHHHHHHHHHHHHHHHHhCCCEEEC
Confidence 2 34567789999999999999998776653
No 164
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.93 E-value=1.3e-24 Score=209.99 Aligned_cols=298 Identities=12% Similarity=0.170 Sum_probs=207.9
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC--CCcEEEcCCcHHHHHH-HHHhcC-------
Q 013521 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE--GDEIFISDGAQSDISR-LQMLLG------- 156 (441)
Q Consensus 87 ~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~--~~~I~~t~G~~~al~~-l~~l~~------- 156 (441)
+..+.+.+...+. .....|....+..++++++++|+.+.++.+ ++++++|+|+++++.+ +..+..
T Consensus 12 ~~~~~~~~~~~~n-----~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~ 86 (345)
T cd06450 12 PALLLEMLTSAKN-----AIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLK 86 (345)
T ss_pred HHHHHHHHHHhcC-----CCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhh
Confidence 3445555555554 233348778899999999999998866664 5689999999999987 444421
Q ss_pred -----C--CCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CC------CccEEEE
Q 013521 157 -----S--NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TS------RTDIIFF 220 (441)
Q Consensus 157 -----~--gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~------~~~~v~i 220 (441)
+ ++.|+++.++|.++...+...| .+++.++.++++..+++ +++ .+ +++++++
T Consensus 87 ~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~ 154 (345)
T cd06450 87 AGGGRGIDKLVIVCSDQAHVSVEKAAAYLD------------VKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVA 154 (345)
T ss_pred cccccccCCeEEEEcCcchhHHHHHHHHHh------------cCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEE
Confidence 2 3478889999999988888887 58889988765432222 211 12 6788888
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEE
Q 013521 221 CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV 299 (441)
Q Consensus 221 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~ 299 (441)
++|+||||.+.+ +++|+++|+++|+++++|++|+.+..... .... .....+...+..|++|+++ ++.++|+++
T Consensus 155 ~~~~~~tG~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~l~-~p~g~g~~~ 228 (345)
T cd06450 155 TAGTTDTGAIDP---LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL--DFGIERVDSISVDPHKYGL-VPLGCSAVL 228 (345)
T ss_pred ecccCCCCCCCC---HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHH--hcCccccCEEEEchhHhhC-CCcchHHHH
Confidence 999999999977 88999999999999999999987654321 1111 1111233467789999886 777888865
Q ss_pred eeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCc
Q 013521 300 VPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNA 378 (441)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 378 (441)
++ .+.+.++...+.. ..+++.+++..+.++++.+.|.++ ++.+..++.+
T Consensus 229 ~~---------------------------~~~~~~~l~~l~~---~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 278 (345)
T cd06450 229 VR---------------------------ALKLWATLRRFGR---DGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNL 278 (345)
T ss_pred HH---------------------------HHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCce
Confidence 43 2334444444432 335777888888999999999887 7776554556
Q ss_pred eEEEEEcCC-----CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee--c-CHHHHHHHHHHHHhh
Q 013521 379 PYVWVQFPG-----SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF--G-HREYISEACRRLKNF 440 (441)
Q Consensus 379 ~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~--~-~~~~~~~~l~~l~~~ 440 (441)
.++.+.+++ ....++.++|. ++|+.+.++..|. ...++|+++. . ++++++++++.|+++
T Consensus 279 ~iv~f~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~~~~--~~~~lRis~~~~~~t~~di~~l~~~l~~~ 345 (345)
T cd06450 279 SLVCFRLKPSVKLDELNYDLSDRLN-ERGGWHVPATTLG--GPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred eEEEEEECCcchhhHHHHHHHHHHH-hcCCEEEEeeEEC--CeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 677777764 23446666665 4466666654443 4678999973 2 789999999999864
No 165
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.93 E-value=7.3e-24 Score=207.95 Aligned_cols=337 Identities=11% Similarity=0.033 Sum_probs=211.1
Q ss_pred CCCCeEEeCCCCCC--C-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDTT--Q-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~~--~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|-.. + ..+|.+.+++.+.+.+... ...+.......+|.+.++++. + .+.+++++++++
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~----~--~~~~~~~~SGse 108 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTL---TSRAFHSDQLGPWYEKVAKLT----G--KDMVLPMNTGAE 108 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhcC----C--CCeEEEcCChHH
Confidence 35678888666321 2 2678999999998876432 111112223345555555542 3 368999999999
Q ss_pred HHHH-HHHh--c-------CCC-CEEEEeCCCchhhHhHH-HHhccccccccccCccceeEEeecCCCCCccCCCCCCCC
Q 013521 147 DISR-LQML--L-------GSN-VTVAVQDPSFPAYIDTS-VIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSR 214 (441)
Q Consensus 147 al~~-l~~l--~-------~~g-d~Vlv~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~ 214 (441)
|+.. +... . ++| +.|+...-+|++....+ ...+..............+..++..+.+.+...+ .++
T Consensus 109 A~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i--~~~ 186 (396)
T PRK04073 109 AVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAI--TPN 186 (396)
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhc--ccC
Confidence 9876 4222 1 134 67888888888764333 2222110000000000122333332111111101 256
Q ss_pred ccEEEEcCCCCccccCCCHH-HHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccc
Q 013521 215 TDIIFFCSPNNPTGHAATWQ-QLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGV 293 (441)
Q Consensus 215 ~~~v~i~~p~NPtG~~~~~~-~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~ 293 (441)
+++|+++.|+||||.+++.+ .+++|.++|++||+++|+||+|..+...+...........+| +.+|||.+|.+|+
T Consensus 187 ~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd----i~~~sK~lg~gg~ 262 (396)
T PRK04073 187 TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD----MYILGKALGGGVF 262 (396)
T ss_pred eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC----EEEecccccCCCC
Confidence 78877777799999998764 699999999999999999999998755432211111111233 3458999998889
Q ss_pred eeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC---C
Q 013521 294 RLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG---L 370 (441)
Q Consensus 294 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---~ 370 (441)
|+||++++++++ +.+.........+.+++.+.++.+.|+.... +...++.+++++++.+.|++++ +
T Consensus 263 ~ig~~~~~~~i~--------~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~i 331 (396)
T PRK04073 263 PISCVAANRDIL--------GVFTPGSHGSTFGGNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKEIDNPMI 331 (396)
T ss_pred cceEEEEcHHHH--------hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 999999998773 3343222333445788999989888862111 2344666777888888888753 2
Q ss_pred eeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 371 KVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.... ..|.+++++++. ...++..++++ +||.+.+. ++++|||+ +..+++++++++++|++++
T Consensus 332 ~~~~-~~g~~~~~~~~~-~~~~~~~~l~~-~Gv~~~~~------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 332 KEVR-GRGLFIGVELNE-PARPYCEALKE-EGLLCKET------HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ccee-cceEEEEEEecc-hHHHHHHHHHH-CCeEEecC------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 2222 357888988863 45567777665 59999763 24689999 5679999999999999864
No 166
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=4.6e-24 Score=206.56 Aligned_cols=271 Identities=18% Similarity=0.173 Sum_probs=181.6
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHH----Hhcccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSV----IVGQAG 182 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~ 182 (441)
+.+| +.+-..+|++.+|++. +.+. .++++|+++++.++..++++||+|+++.|+|++...... ..|
T Consensus 46 y~r~-~~pt~~~le~~la~l~----g~~~--~~~~~sG~~ai~~~~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G--- 115 (366)
T PRK08247 46 YSRT-GNPTRGVLEQAIADLE----GGDQ--GFACSSGMAAIQLVMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWN--- 115 (366)
T ss_pred ccCC-CCchHHHHHHHHHHHh----CCCc--EEEEcCHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHhhccC---
Confidence 4455 3456789999999986 5543 467777788998866788999999999999998544433 345
Q ss_pred ccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC
Q 013521 183 KFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD 262 (441)
Q Consensus 183 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~ 262 (441)
++++.++..+.+.+...+ .+++++|++++|+||+| +..++++|+++|++||+++|+|++|......
T Consensus 116 ---------~~v~~vd~~d~~~l~~~i--~~~tklv~le~P~NP~~---~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~ 181 (366)
T PRK08247 116 ---------VRFVYVNTASLKAIEQAI--TPNTKAIFIETPTNPLM---QETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ 181 (366)
T ss_pred ---------ceEEEECCCCHHHHHHhc--ccCceEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcccccc
Confidence 477777653211111111 35789999999999975 5566999999999999999999999532111
Q ss_pred CCCCcccccCCCcceeEEEecCCcccCC-ccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCC
Q 013521 263 PSPRSIYEIPGAREVAIEISSFSKFAGF-TGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSP 341 (441)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~i~S~SK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 341 (441)
.++ ..+.++++.|+||.++. ++++.||++++++.+ .+.+...+.......+++.+..+...++
T Consensus 182 ---~p~-----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l-------~~~~~~~~~~~g~~~s~~~a~l~~~~l~- 245 (366)
T PRK08247 182 ---RPL-----EEGADIVIHSATKYLGGHNDVLAGLVVAKGQEL-------CERLAYYQNAAGAVLSPFDSWLLIRGMK- 245 (366)
T ss_pred ---Cch-----hcCCcEEEeecceeccCCCceeeeEEecChHHH-------HHHHHHHHHhcCCCCChHHHHHHHhccC-
Confidence 111 12345999999999973 256899999874332 4555555555545567777766665554
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhC-CCee--eCCCCceEEEEEcCCCChHHHHHHHHH-------------hcCeEE
Q 013521 342 DGFQALRTVIDYYKENAKIIVDAFQSL-GLKV--NGGKNAPYVWVQFPGSSSWDVFAEILE-------------KTHILT 405 (441)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~~~~~~~~~~~~~~~~~~~~~~ll~-------------~~gi~v 405 (441)
.+..+.++++++++.+.+.|+++ ++.. +++.+|+|.| ++++ .+...++++ .+.+.+
T Consensus 246 ----tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~---~~~~~~~~~~l~~~~~~~slg~~~sl~~ 317 (366)
T PRK08247 246 ----TLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQD---EEWVNPFLKSLKLITFAESLGGVESFIT 317 (366)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECC---HHHHHHHHHcCCcceEccCCCCCceEEE
Confidence 23455567799999999999987 6653 3335666666 6652 222222222 245666
Q ss_pred eCCCCcCC-----------CCCCeEEEEeec
Q 013521 406 IPGSGFGP-----------GGNEHIRVSAFG 425 (441)
Q Consensus 406 ~pg~~f~~-----------~~~~~iRls~~~ 425 (441)
.|++.++. -.++.+|||++.
T Consensus 318 ~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl 348 (366)
T PRK08247 318 YPATQTHADIPEEIRIANGVCNRLLRFSVGI 348 (366)
T ss_pred CCcccccccCCHHHHHhcCCCCCeEEEEecc
Confidence 78765532 125689999864
No 167
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.93 E-value=1.8e-23 Score=206.66 Aligned_cols=343 Identities=10% Similarity=0.042 Sum_probs=209.3
Q ss_pred CCCCeEEeCCCCCCC---CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCC-CcEEEcCCcH
Q 013521 70 PDARLIRLGIGDTTQ---PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEG-DEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~---~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~I~~t~G~~ 145 (441)
.++.++|+..|.... ..++.+.+++.+.+.+.. . .+.+..+.. ...++|+++....+... +.++++++++
T Consensus 39 dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~----~-~~~~~~~~~-~~~~la~~l~~~~~~~~~~~~~f~~sGs 112 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS----H-TCFQVLAYE-PYLELCEKMNQKVPGDFAKKTLLVTTGS 112 (425)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCC----C-ccccccCCH-HHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 456788887765332 248899999999987532 1 111111222 33477777755333322 3555555555
Q ss_pred HHHH----HHHHhcCCCCEEEEeCCCchhhHhHHHHhccc--c---ccccccCccceeEEeecCCCCCccCC-----CCC
Q 013521 146 SDIS----RLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQA--G---KFLKETGKYRNIVYMNCRPENNFFPD-----LST 211 (441)
Q Consensus 146 ~al~----~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~--~---~~~~~~~~~~~v~~v~~~~~~~~~~~-----~~~ 211 (441)
+|+. +...+.++ ..|+...++|++....+...+.. . .+...... .....+|.+.. +...+ ++.
T Consensus 113 ea~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~-~~~~~~~~~~l~~ 189 (425)
T PRK08088 113 EAVENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGH-VYRALYPCPLH-GVSEDDAIASIER 189 (425)
T ss_pred HHHHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCC-cEEcCCCcccc-CccHHHHHHHHHH
Confidence 5544 32333344 45666799999987666555421 0 00000000 01111222221 11100 111
Q ss_pred -------CCCccEEEEcCC--CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEe
Q 013521 212 -------TSRTDIIFFCSP--NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEIS 282 (441)
Q Consensus 212 -------~~~~~~v~i~~p--~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 282 (441)
..+..++++ .| +|++....+.+.+++|+++|++||+++|+||+|..+...+...++... +.+..+.
T Consensus 190 ~l~~~~~~~~~aavi~-Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~----~~~pdi~ 264 (425)
T PRK08088 190 IFKNDAAPEDIAAIII-EPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQM----GVAADLT 264 (425)
T ss_pred HHHhccCCCceEEEEE-CcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhc----CCCCCEE
Confidence 234556554 45 888888899999999999999999999999999976554322222122 2234489
Q ss_pred cCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHH
Q 013521 283 SFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKII 361 (441)
Q Consensus 283 S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l 361 (441)
||||.++ +|+|+||++++++++ +.+.........+.+++.|.++.++++.... .+++++++..+..++.+
T Consensus 265 s~sK~l~-~G~rig~v~~~~~~~--------~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 335 (425)
T PRK08088 265 TFAKSIA-GGFPLAGVTGRAEVM--------DAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGL 335 (425)
T ss_pred EEecccc-CCCcceeeEecHHHH--------hhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999998 999999999998874 3443333444556789999999999984333 45666666655555666
Q ss_pred HHHHHhCCC-eeeCCCCceEEEEEcCC-C--------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee--cCHHH
Q 013521 362 VDAFQSLGL-KVNGGKNAPYVWVQFPG-S--------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF--GHREY 429 (441)
Q Consensus 362 ~~~L~~~g~-~~~~~~~~~~~~~~~~~-~--------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~~ 429 (441)
.+.+++++. ....+ .|.++|+.+.. . ....+...+++ +||.+.|+..| .+.|||++. .++++
T Consensus 336 ~~l~~~~~~~~~v~g-~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~Gv~~~~~~~~----~~~iRl~~~~~~t~~e 409 (425)
T PRK08088 336 LAIAEKHPEIGDVRG-LGAMIAIELFEDGDHSKPNAKLTAQIVARARD-KGLILLSCGPY----YNVLRILVPLTIEDAQ 409 (425)
T ss_pred HHHHHhCCCeEEEec-cceEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CCCEEecCCCC----CCEEEEECCCCcCHHH
Confidence 555555543 22222 38899999831 1 13445556555 59998876544 368999975 37999
Q ss_pred HHHHHHHHHhhC
Q 013521 430 ISEACRRLKNFL 441 (441)
Q Consensus 430 ~~~~l~~l~~~l 441 (441)
+++++++|.+++
T Consensus 410 i~~~i~~l~~~l 421 (425)
T PRK08088 410 IRQGLEIIAQCF 421 (425)
T ss_pred HHHHHHHHHHHH
Confidence 999999998864
No 168
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.92 E-value=6.4e-23 Score=202.96 Aligned_cols=334 Identities=17% Similarity=0.156 Sum_probs=202.1
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHh-hccCCCCCCCCCCCcCcHHHHHH-HHHHHhhhCCCCCCcEEEcCCcHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAF-ALSTVKGYKGYGAEQGNMALRTA-IADKFYKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~-~~~~~~~~~~Y~~~~g~~~lr~~-ia~~l~~~~~~~~~~I~~t~G~~~al~ 149 (441)
+..++|..++++ +|+.+.+++...+. .+........|....-..+..++ ..+.+.+.++.+..+|++++|+ +++.
T Consensus 25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt-~al~ 101 (416)
T PRK00011 25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSGS-QANA 101 (416)
T ss_pred hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCch-HHHH
Confidence 357999988865 67889989877653 22111111122111011222222 2223333457777778777775 5776
Q ss_pred H-HHHhcCCCCEEEEeCCCchhhHhHHH--HhccccccccccCccceeEEeecCCCCCccCCCCC------CCCccEEEE
Q 013521 150 R-LQMLLGSNVTVAVQDPSFPAYIDTSV--IVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST------TSRTDIIFF 220 (441)
Q Consensus 150 ~-l~~l~~~gd~Vlv~~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~------~~~~~~v~i 220 (441)
+ +..++++||+|+++.|+|+++..... ..+..| .+++.++++.+ ++..|+++ ..+++++++
T Consensus 102 ~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g---------~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~~ 171 (416)
T PRK00011 102 AVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKL---------YNVVSYGVDEE-TGLIDYDEVEKLALEHKPKLIIA 171 (416)
T ss_pred HHHHHhcCCCCEEEEeccccCCccccccccccccce---------eeEeecCcCcc-cCCcCHHHHHHHHHhcCCCEEEE
Confidence 5 67788999999999999987532211 111111 36777777542 22333221 247899888
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccc-cccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEE
Q 013521 221 CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA-YITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298 (441)
Q Consensus 221 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~-~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l 298 (441)
++++|| ...+ +++|+++|++||+++|+|++|.. +...+. +..+. ...++++|+||++ +|+|.||+
T Consensus 172 ~~~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~------~~di~~~S~~K~l--~g~~gg~i 238 (416)
T PRK00011 172 GASAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP------HADVVTTTTHKTL--RGPRGGLI 238 (416)
T ss_pred CCCcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC------CCcEEEecCCcCC--CCCCceEE
Confidence 766654 4445 88999999999999999999863 222211 22221 2248899999976 68999999
Q ss_pred Eeec-cccccCCchhHHHHHHHHhhhcCCCc-HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeC-C
Q 013521 299 VVPE-ELRYSNGYPVIKDFNRIVCTCFNGAS-NIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNG-G 375 (441)
Q Consensus 299 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~ 375 (441)
++++ ++ .+.+.........+.+ ...+.++..++.....+++++++++++++++++.+.|++.|+++.. .
T Consensus 239 ~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 310 (416)
T PRK00011 239 LTNDEEL--------AKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVSGG 310 (416)
T ss_pred EeCCHHH--------HHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeeecC
Confidence 9975 44 3445443322222222 2222222222221111345778899999999999999998887753 2
Q ss_pred CCceEEEEEcCCC--ChHHHHHHHHHhcCeEEeCCC-CcC---CCCCCeEEEEe------ecCHHHHHHHHHHHHhh
Q 013521 376 KNAPYVWVQFPGS--SSWDVFAEILEKTHILTIPGS-GFG---PGGNEHIRVSA------FGHREYISEACRRLKNF 440 (441)
Q Consensus 376 ~~~~~~~~~~~~~--~~~~~~~~ll~~~gi~v~pg~-~f~---~~~~~~iRls~------~~~~~~~~~~l~~l~~~ 440 (441)
..++++|+.+++. +..++.+ .|+++||.+..+. .|. +..+..+|++. ..+.++++++++.|+++
T Consensus 311 ~~~~~~~i~~~~~~~~~~~~~~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~ 386 (416)
T PRK00011 311 TDNHLVLVDLRSKGLTGKEAEA-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADV 386 (416)
T ss_pred CCCeEEEEeCcccCCCHHHHHH-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHH
Confidence 3458899999632 3445444 5566799998432 121 22346799964 22689999999999875
No 169
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=2.4e-23 Score=204.75 Aligned_cols=336 Identities=17% Similarity=0.152 Sum_probs=211.9
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC----CCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH
Q 013521 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGY----GAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 74 ~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y----~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~ 149 (441)
.+.|+.+... +.|+.+.+++.+.+......+....+ .......++|+.+++++ ++++++|++|+|++++++
T Consensus 4 ~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~v~~~~g~t~a~~ 78 (402)
T TIGR02006 4 PIYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI----GADSREIVFTSGATESNN 78 (402)
T ss_pred cEEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCCHHHHHH
Confidence 3677766654 57788999998877543211111011 11234566788888875 888899999999999998
Q ss_pred H-HHHh----cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEc
Q 013521 150 R-LQML----LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFC 221 (441)
Q Consensus 150 ~-l~~l----~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~ 221 (441)
+ +..+ .++||+|++..++|+++...+..+...| .+++.++.++++.++++ +++ .+++++++++
T Consensus 79 ~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g---------~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~ 149 (402)
T TIGR02006 79 LAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREG---------FEVTYLPPKSNGLIDLEELKAAIRDDTILVSIM 149 (402)
T ss_pred HHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcC---------CEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEE
Confidence 7 4333 3689999999999998776654442222 48888888754332221 111 3578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
+++||||.+++ +++|.++|+++|+++++|++++... .+..+.. .+..+++.|++|.+|.+| +|+++++
T Consensus 150 ~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~---~~~~~~~----~~~D~~~~s~~K~~gp~G--~G~l~~~ 217 (402)
T TIGR02006 150 HVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK---IPINVNE----LKVDLMSISGHKIYGPKG--IGALYVR 217 (402)
T ss_pred CCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC---cccCccc----cCCCEEEEehhhhcCCCc--eEEEEEc
Confidence 99999999998 7899999999999999999987321 1222222 233488999999887446 8998888
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC--c
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKN--A 378 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--~ 378 (441)
++......+. .............+.+.....+..+.++. ....++...+++++.++.+.+.|+++ ++.+..+.. .
T Consensus 218 ~~~~~~~~~~-~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~ 295 (402)
T TIGR02006 218 RKPRVRLEAL-IHGGGHERGMRSGTLPTHQIVGMGEAFRI-AKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRV 295 (402)
T ss_pred cCCCCCCCce-ecCCCccCCccCCCccHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccC
Confidence 6543211100 00000000111122333333333344431 11345777788999999999999876 666543211 1
Q ss_pred e-EEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCC-----------------CCCeEEEEe--ecCHHHHHHHHHHHH
Q 013521 379 P-YVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPG-----------------GNEHIRVSA--FGHREYISEACRRLK 438 (441)
Q Consensus 379 ~-~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----------------~~~~iRls~--~~~~~~~~~~l~~l~ 438 (441)
+ .+.+.++.....++... + .+|.+..|..+.+. ..++||+|+ +++++|++++++.|+
T Consensus 296 p~~~~v~f~~~~~~~~~~~-l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~ 372 (402)
T TIGR02006 296 PGNLNVSFNYVEGESLIMA-L--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVK 372 (402)
T ss_pred CCeEEEEEeCcCHHHHHHh-c--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHH
Confidence 1 11233333334444433 2 48999888776431 137899997 558999999999998
Q ss_pred hh
Q 013521 439 NF 440 (441)
Q Consensus 439 ~~ 440 (441)
++
T Consensus 373 ~~ 374 (402)
T TIGR02006 373 SA 374 (402)
T ss_pred HH
Confidence 75
No 170
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=1e-22 Score=198.53 Aligned_cols=334 Identities=12% Similarity=0.105 Sum_probs=215.7
Q ss_pred CCCeEEeCCCC--CCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCC-cEEEcCCcHHH
Q 013521 71 DARLIRLGIGD--TTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~I~~t~G~~~a 147 (441)
++.++|+..|. ..+...|.+.+++.+.+.... .+ +..-..++++++|+.+. + .++ .++++++++++
T Consensus 28 g~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~------~~-~~~~~~~~~~~la~~l~---~-~~~~~~~~~~SGseA 96 (375)
T PRK04260 28 GKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIW------HS-PNLYLNSLQEEVAQKLI---G-DKDYLAFFCNSGAEA 96 (375)
T ss_pred CCEEEECCCCcccccCCCCHHHHHHHHHHHHhcC------cc-cCccCCHHHHHHHHHHh---c-CcCCEEEEcCccHHH
Confidence 45688987663 334447889999999887532 12 12234668889998763 2 233 46788889888
Q ss_pred HHH-HHH--hcCCCCEEEEeCCCchhhH-hHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEc
Q 013521 148 ISR-LQM--LLGSNVTVAVQDPSFPAYI-DTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~~--l~~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~ 221 (441)
... +.. ...+++.|++.+.+|++.. ......+....-.........+...+.+ + ..+++. .+++.+|++.
T Consensus 97 ~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d-l~~l~~~l~~~~a~vi~e 172 (375)
T PRK04260 97 NEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFN---D-LNSVKALVNKNTAAVMLE 172 (375)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCC---C-HHHHHHhcCCCeEEEEEC
Confidence 875 322 2345678999999988743 3333333211000000000011111111 1 111111 2466788877
Q ss_pred CCCCccccCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
.++|++|... +.+.+++|.++|+++|+++|+||+|..+...+.+.+.....-.+| +.||||.++ +|+|+||+++
T Consensus 173 ~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~G~~ig~~~~ 247 (375)
T PRK04260 173 LVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD----IFTLAKGLA-NGVPVGAMLA 247 (375)
T ss_pred CeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC----EEEeccccc-CCcceEEEEE
Confidence 8899999874 568899999999999999999999987655443322212222344 348999998 8999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCc
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSLG-LKVNGGKNA 378 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~ 378 (441)
++++. +.+.........+.+++.+.++.+.++.... .++++.++..+..++.+.+.+.+++ +.... ..|
T Consensus 248 ~~~~~--------~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g 318 (375)
T PRK04260 248 KSSLG--------GAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVR-GLG 318 (375)
T ss_pred cHHHH--------hhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccc
Confidence 98763 3333222233445688899999998864322 4567777777777888888777664 33332 379
Q ss_pred eEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 379 PYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
+++|++++. +..++.+++.+ +||.+.|. +.+.+|++. ..+++++++++++|++++
T Consensus 319 ~~~~~~~~~-~~~~~~~~l~~-~Gi~v~~~------~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 319 YMIGIETTA-DLSQLVEAARD-KGLIVLTA------GTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred eEEEEEecC-cHHHHHHHHHh-CCCEEecC------CCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 999999842 45566666665 59999874 247899997 338999999999998864
No 171
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=5.9e-23 Score=195.02 Aligned_cols=335 Identities=19% Similarity=0.207 Sum_probs=244.2
Q ss_pred CCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCCC--CCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGYK--GYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
+.+++||+.+++ .+...+.+.+++.+++++++...+.. -++...-..+|.+.+|+|+ | .++.+++++|-...
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~----g-~e~al~f~SGy~AN 112 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL----G-AEAALLFSSGFVAN 112 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh----C-CCcEEEEcccchhH
Confidence 457999999996 57788999999999999875322222 2555667788999999996 5 34799999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC---CC-CccEEEEcCC
Q 013521 148 ISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST---TS-RTDIIFFCSP 223 (441)
Q Consensus 148 l~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~---~~-~~~~v~i~~p 223 (441)
+.++..+++++|.|+.....|.+....++..+ .+++.....+-..+...+.. .. +.++|++...
T Consensus 113 ~~~i~~l~~~~dli~~D~lnHASiidG~rls~------------a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegV 180 (388)
T COG0156 113 LGLLSALLKKGDLIFSDELNHASIIDGIRLSR------------AEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGV 180 (388)
T ss_pred HHHHHHhcCCCcEEEEechhhhhHHHHHHhCC------------CcEEEecCCCHHHHHHHHHhhhccCCCceEEEEecc
Confidence 99999999999999999999999999999887 47777766432111111111 11 3566666577
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCC--cceeEEEecCCcccCCccceeEEEEee
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGA--REVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~--~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
-...|.+.| +.+|++++++|+.++++||+|+-..+++....+.+..+. .+++|.++||||.||..| ||+.++
T Consensus 181 fSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~ 254 (388)
T COG0156 181 FSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGS 254 (388)
T ss_pred ccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCc
Confidence 788999999 999999999999999999999977776554444432222 345799999999999888 999999
Q ss_pred ccccccCCchhHHHHHHH-HhhhcCC-CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCce
Q 013521 302 EELRYSNGYPVIKDFNRI-VCTCFNG-ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAP 379 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 379 (441)
..+. +.+... +...+.+ .++....++.+.++. .+....++++++++.+.+.+.+...++.+.+ ...+
T Consensus 255 ~~~~--------d~L~~~ar~~ifStalpP~~aaa~~~al~~--l~~~~~~r~~L~~~~~~~~~~~~~~~~~~~~-s~s~ 323 (388)
T COG0156 255 AALI--------DYLRNRARPFIFSTALPPAVAAAALAALRI--LEEGPERRERLQELAAFFRSLLKALGLVLLP-SESP 323 (388)
T ss_pred HHHH--------HHHHHhCCceeccCCCCHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhcCCccCC-CCCC
Confidence 8873 444432 3333332 334443444555542 1223567888888888888777776777643 5677
Q ss_pred EEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 380 YVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 380 ~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
++.+-+.. ....++...++++ ||.+.+...-. +.+...+|+++ ..++++++.+++.|.++
T Consensus 324 I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 324 IIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 88777763 3455667777777 99998876543 45568899997 44899999999999875
No 172
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.92 E-value=4.9e-23 Score=201.29 Aligned_cols=213 Identities=15% Similarity=0.205 Sum_probs=150.2
Q ss_pred CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHH----HHhcccccccc
Q 013521 112 AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTS----VIVGQAGKFLK 186 (441)
Q Consensus 112 ~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~ 186 (441)
+.++..+|++++|++. +. +++++++|+++++.. +..++++||+|+++.|.|+...... ...|
T Consensus 62 ~~p~~~~Le~~iA~~~----g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G------- 128 (400)
T PRK06234 62 GNPTSTEVENKLALLE----GG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYG------- 128 (400)
T ss_pred CCccHHHHHHHHHHHh----CC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCC-------
Confidence 6678999999999996 43 467888888888886 6778999999999999998765443 4455
Q ss_pred ccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHc--CcEEEEcccccccccCCC
Q 013521 187 ETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKAN--GSIIVYDSAYAAYITDPS 264 (441)
Q Consensus 187 ~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~--~~~ii~De~~~~~~~~~~ 264 (441)
++++.++..+.+.+...+ .+++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|.......
T Consensus 129 -----~~v~~vd~~d~e~l~~~i--~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~- 197 (400)
T PRK06234 129 -----VEVTFVDTSNLEEVRNAL--KANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQR- 197 (400)
T ss_pred -----eEEEEECCCCHHHHHHHh--ccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCC-
Confidence 477777754211111111 367899999999999999999 88888999997 99999999998654321
Q ss_pred CCcccccCCCcceeEEEecCCcccCCcccee-EEEEeeccccccCCchhHHHHHHH--HhhhcCCCcHHHHHHHHHhcCC
Q 013521 265 PRSIYEIPGAREVAIEISSFSKFAGFTGVRL-GWTVVPEELRYSNGYPVIKDFNRI--VCTCFNGASNIVQAGGLACLSP 341 (441)
Q Consensus 265 ~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~ 341 (441)
+ + .. +..+++.|+||.++.+|.|+ ||+++++++ ++.+... ........+++....+...+
T Consensus 198 ~--l-~~----g~Divv~S~sK~l~g~g~~~gG~v~~~~~~--------~~~l~~~~~~~~~g~~l~p~~a~l~~~~l-- 260 (400)
T PRK06234 198 P--L-QL----GADVVVHSATKYLNGHGDVIAGFVVGKEEF--------INQVKLFGIKDMTGSVIGPFEAFLIIRGM-- 260 (400)
T ss_pred c--h-hh----CCcEEEeeccccccCCCCceeEEEEecHHH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhcc--
Confidence 1 2 11 23499999999998888775 999998876 3444321 21222334555433333333
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 342 DGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
+.+..+.++.+++.+.+.+.|+++
T Consensus 261 ---~tl~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 261 ---KTLQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHcC
Confidence 334556666778888888889876
No 173
>PRK06460 hypothetical protein; Provisional
Probab=99.92 E-value=1.2e-22 Score=197.04 Aligned_cols=212 Identities=22% Similarity=0.249 Sum_probs=150.0
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCch----hhHhHHHHhccccccccc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFP----AYIDTSVIVGQAGKFLKE 187 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~----~~~~~~~~~g~~~~~~~~ 187 (441)
.+...+|++++|++. +.+ ..+++++| ++++.. +..++++||+|+++.|.|+ .+...++..|
T Consensus 44 ~p~~~~L~~~lA~l~----g~~-~~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G-------- 109 (376)
T PRK06460 44 NPTVLELTKKIVELE----NAE-MGVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWG-------- 109 (376)
T ss_pred CccHHHHHHHHHHHh----CCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhC--------
Confidence 567899999999996 554 35666666 578886 6778899999999986553 4445566666
Q ss_pred cCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCc
Q 013521 188 TGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRS 267 (441)
Q Consensus 188 ~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~ 267 (441)
.++..++.+.+ .....+ ..+++++|++++|+||||.+++ +++|+++|+++|++||+|++|.... .
T Consensus 110 ----~~v~~~~~~~~-~~l~~~-~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~------~ 174 (376)
T PRK06460 110 ----VNVDASNPGSD-NIIEKA-KSKRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPI------N 174 (376)
T ss_pred ----cEEEEECCCCH-HHHHHh-cCCCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccc------c
Confidence 47777776532 221111 1367899999999999999999 5678889999999999999997532 1
Q ss_pred ccccCCCcceeEEEecCCcccCCc-cceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHH
Q 013521 268 IYEIPGAREVAIEISSFSKFAGFT-GVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQA 346 (441)
Q Consensus 268 ~~~~~~~~~~~i~i~S~SK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 346 (441)
...+. .+.++++.|+||.++.. +.++||+++++++ ++.+...+.....+.++.. +..++. +.++
T Consensus 175 ~~~l~--~~~divv~S~sK~l~G~~~~~~G~~~~~~~l--------~~~l~~~~~~~g~~~~~~~---a~~~l~--~~~~ 239 (376)
T PRK06460 175 QKPLE--LGADIVVHSASKFLAGHNDVIAGLAAGYGKL--------LNVIDQMRRTLGTSLDPHA---AYLTLR--GIKT 239 (376)
T ss_pred CChhh--cCCCEEEeecceeccCCCCceEEEEecCHHH--------HHHHHHHHHhcCCCCCHHH---HHHHHh--chhh
Confidence 11111 23459999999998522 3679999998876 4556554444333333322 333333 3567
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC
Q 013521 347 LRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 347 ~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
++.+.++.+++++.+.+.|+++
T Consensus 240 l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 240 LKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 7888999999999999999987
No 174
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=3.4e-22 Score=195.02 Aligned_cols=318 Identities=13% Similarity=0.107 Sum_probs=205.9
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhc----CCCC
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLL----GSNV 159 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~----~~gd 159 (441)
++.+.+.+++.+.+.... .....| .+..++.+.+.+++.+.++.+++++++++|+++++.. +..+. ++||
T Consensus 31 ~~~~~~~~a~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~ 105 (371)
T PRK13520 31 EPHPIARKAHEMFLETNL--GDPGLF---PGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKP 105 (371)
T ss_pred CchHHHHHHHHHHHhcCC--CCcccC---ccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCc
Confidence 456777888888776421 111112 2334433444444444347777789999999999876 43333 3578
Q ss_pred EEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCccccCCCHHHH
Q 013521 160 TVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPTGHAATWQQL 236 (441)
Q Consensus 160 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPtG~~~~~~~~ 236 (441)
+|++.+++|.++...++..| .+++.++.+.++.++++ +++ .+++++|++++++||||.+.| +
T Consensus 106 ~vl~~~~~h~s~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l 170 (371)
T PRK13520 106 NIVVPESAHFSFDKAADMLG------------VELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---I 170 (371)
T ss_pred eEEecCcchHHHHHHHHHcC------------ceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---H
Confidence 99999999999888888777 57888887643222221 222 256777787888999999999 8
Q ss_pred HHHHHHHHHcCcEEEEcccccccccC--CCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecc-ccccCCchhH
Q 013521 237 KKLVEFAKANGSIIVYDSAYAAYITD--PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE-LRYSNGYPVI 313 (441)
Q Consensus 237 ~~i~~~a~~~~~~ii~De~~~~~~~~--~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~-~~~~~~~~~~ 313 (441)
++|.++|+++|+++++|++|..+..+ ..+ ...... ..+...+..|.+|+. .+|.++|++++.++ ++
T Consensus 171 ~~I~~l~~~~g~~livD~a~~~~~~~~~~~~-~~~~~~-~~~vd~~~~s~~K~~-~a~~~~G~~~~~~~~~~-------- 239 (371)
T PRK13520 171 PELSKIALENGIFLHVDAAFGGFVIPFLDDP-PNFDFS-LPGVDSITIDPHKMG-LAPIPAGGILFRDESYL-------- 239 (371)
T ss_pred HHHHHHHHHcCCCEEEEecchhHHHHhhcCC-CCcccc-CCCCceEEECCcccc-CccCCceEEEEcCHHHH--------
Confidence 88899999999999999999865422 111 111111 123345666788854 57889998886544 32
Q ss_pred HHHHHHHhhh--------cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEc
Q 013521 314 KDFNRIVCTC--------FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQF 385 (441)
Q Consensus 314 ~~~~~~~~~~--------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 385 (441)
+.+....... ..+.+.....++.++++.-....+++++++..++++++.+.|++.|++...++..+++.+++
T Consensus 240 ~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~ 319 (371)
T PRK13520 240 DALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEPVLNIVAFDD 319 (371)
T ss_pred HhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCceEEEEec
Confidence 2221000000 00112233444445554322334577888999999999999998888733234566788887
Q ss_pred CCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee--cCHHHHHHHHHHHHhhC
Q 013521 386 PGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF--GHREYISEACRRLKNFL 441 (441)
Q Consensus 386 ~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~~~~~~l~~l~~~l 441 (441)
+ +..++.++|.++ ||.+.++. .++++|+|+. +++++++++++.|++++
T Consensus 320 ~--~~~~v~~~L~~~-gi~v~~~~-----~~~~iRis~~~~~t~edi~~~~~~l~~~~ 369 (371)
T PRK13520 320 P--NPDEVREKLRER-GWRVSVTR-----CPEALRIVCMPHVTREHIENFLEDLKEVK 369 (371)
T ss_pred C--CHHHHHHHHHHC-CceeccCC-----CCCEEEEEEECCCCHHHHHHHHHHHHHHh
Confidence 6 456676776655 99998753 2468999973 58999999999998753
No 175
>PRK14012 cysteine desulfurase; Provisional
Probab=99.92 E-value=7.2e-23 Score=201.65 Aligned_cols=334 Identities=17% Similarity=0.165 Sum_probs=207.4
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHh---hccCCCC-CC--CCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 74 LIRLGIGDTTQPIPDIITSAMAEHAF---ALSTVKG-YK--GYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 74 ~i~l~~g~~~~~~~~~~~~al~~~~~---~~~~~~~-~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
.+.|+.+... ++|+.+.+++.+.+. .+.+... .. .+.......++|+.+|+++ +.++++|++|+|++++
T Consensus 4 ~iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----g~~~~~v~~~~g~t~a 78 (404)
T PRK14012 4 PIYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI----GADPREIVFTSGATES 78 (404)
T ss_pred eEEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc----CcCcCeEEEeCCHHHH
Confidence 3667766654 577889999988775 2211000 00 1111124556778888775 8888999999999999
Q ss_pred HHH-HHHh----cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEE
Q 013521 148 ISR-LQML----LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIF 219 (441)
Q Consensus 148 l~~-l~~l----~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~ 219 (441)
+++ +..+ .++||+|+++.++|+++...+..+...| .+++.++.++++.++++ +++ .+++++++
T Consensus 79 l~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g---------~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~ 149 (404)
T PRK14012 79 DNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREG---------FEVTYLDPQSNGIIDLEKLEAAMRDDTILVS 149 (404)
T ss_pred HHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCC---------CEEEEEccCCCCcCCHHHHHHhcCCCCEEEE
Confidence 987 4443 3789999999999998866665542122 48888888754332222 222 36789999
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEE
Q 013521 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV 299 (441)
Q Consensus 220 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~ 299 (441)
+++++||||.+++ +++|.++|+++|+++|+|++++. +..+..+... +..+++.|++|.+| |+ ++|+++
T Consensus 150 ~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~---g~~~~~~~~~----~~D~~~~s~~K~~g-p~-g~G~l~ 217 (404)
T PRK14012 150 IMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV---GKVPIDLSKL----KVDLMSFSAHKIYG-PK-GIGALY 217 (404)
T ss_pred EECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc---CCcccCcccC----CCCEEEEehhhccC-CC-ceEEEE
Confidence 9999999999998 78999999999999999999873 1112222222 23478889999887 54 699999
Q ss_pred eeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC---
Q 013521 300 VPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGG--- 375 (441)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--- 375 (441)
++++......+.... ..........+.+.....+..+++... ........++.++.++++.+.|+++ ++.+...
T Consensus 218 ~~~~~~~~~~~~~~g-~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~ 295 (404)
T PRK14012 218 VRRKPRVRLEAQMHG-GGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQ 295 (404)
T ss_pred EecCCCCCCCceecC-CCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccc
Confidence 887653211000000 000000011112222222222232210 1223556677788888888888876 5555421
Q ss_pred --CCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCC-----------------CCCeEEEEe--ecCHHHHHHHH
Q 013521 376 --KNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPG-----------------GNEHIRVSA--FGHREYISEAC 434 (441)
Q Consensus 376 --~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----------------~~~~iRls~--~~~~~~~~~~l 434 (441)
+...++|+.+. +..++... + +++.+.+|..|.+. ..+.||+++ ..+++++++++
T Consensus 296 ~~~~~~~~~~~~~--~~~~~~~~-l--~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~ 370 (404)
T PRK14012 296 RVPGNLNVSFNYV--EGESLIMA-L--KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAI 370 (404)
T ss_pred cCCCEEEEEEeCc--CHHHHHHh-C--CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHH
Confidence 12234666653 23344444 3 37888888766432 147899997 35899999999
Q ss_pred HHHHhh
Q 013521 435 RRLKNF 440 (441)
Q Consensus 435 ~~l~~~ 440 (441)
+.|+++
T Consensus 371 ~~l~~~ 376 (404)
T PRK14012 371 ELVRKS 376 (404)
T ss_pred HHHHHH
Confidence 999875
No 176
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.91 E-value=4.4e-22 Score=192.43 Aligned_cols=280 Identities=16% Similarity=0.176 Sum_probs=186.1
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHH----hccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVI----VGQA 181 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~ 181 (441)
+..| +.+...+|++++|++. .++.|++++| ++++.. +..++++||+|++..|+|.++...+.. .|
T Consensus 45 y~ry-~~p~~~~Le~~lA~l~------~~~~v~~~sG-~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G-- 114 (366)
T PRK07582 45 YGRA-SNPTWRALEAALGELE------GAEALVFPSG-MAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG-- 114 (366)
T ss_pred eECC-CCccHHHHHHHHHHHc------CCCEEEECCH-HHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe--
Confidence 4455 5668899999999984 3445555555 568886 677899999999999999888765532 35
Q ss_pred cccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccccc
Q 013521 182 GKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYIT 261 (441)
Q Consensus 182 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~ 261 (441)
++++.++.+++.. ...+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 115 ----------~~v~~v~~~~~~~-----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~- 175 (366)
T PRK07582 115 ----------VTVREAPTAGMAE-----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL- 175 (366)
T ss_pred ----------EEEEEECCCChHH-----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc-
Confidence 5888888754311 12357899999999999998887 8999999999999999999986321
Q ss_pred CCCCCcccccCCCcceeEEEecCCcccC-CccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC
Q 013521 262 DPSPRSIYEIPGAREVAIEISSFSKFAG-FTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLS 340 (441)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~i~S~SK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 340 (441)
...| + .+ +..+++.|+||.++ .+|+|+||++++++.+ .+.+...+......++++....+...++
T Consensus 176 ~~~p--~-~~----g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l-------~~~l~~~~~~~g~~~~~~~a~l~~r~l~ 241 (366)
T PRK07582 176 GQRP--L-EL----GADLVVASDTKALTGHSDLLLGYVAGRDPEL-------MAAVERWRLLAGAIPGPFEAWLAHRSLG 241 (366)
T ss_pred ccCc--h-hc----CCcEEEecccccccCCCCeeEEEEEcCcHHH-------HHHHHHHHHHhCCCCCHHHHHHHHhccc
Confidence 1112 1 12 12388999999884 3679999999864433 4555555555555566666554444443
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ee-C----CC-----------CceEEEEEcCCCChHHHHHHHHHhcC
Q 013521 341 PDGFQALRTVIDYYKENAKIIVDAFQSL-GLK-VN-G----GK-----------NAPYVWVQFPGSSSWDVFAEILEKTH 402 (441)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~----~~-----------~~~~~~~~~~~~~~~~~~~~ll~~~g 402 (441)
.+..+.++.+++...+.+.|+++ .+. +. + ++ .|..+.++++ + .+.+.+++++.+
T Consensus 242 -----tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--~-~~~~~~~~~~l~ 313 (366)
T PRK07582 242 -----TLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--D-AAAAERFVAASR 313 (366)
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--C-HHHHHHHHHhCC
Confidence 23555577778999999999987 332 21 1 11 2446777775 2 344556666666
Q ss_pred eEEeCCCCcCC--------------CCCCeEEEEeec--CHHHHHHHHHHHH
Q 013521 403 ILTIPGSGFGP--------------GGNEHIRVSAFG--HREYISEACRRLK 438 (441)
Q Consensus 403 i~v~pg~~f~~--------------~~~~~iRls~~~--~~~~~~~~l~~l~ 438 (441)
+... +..++. ..++.||+|++- .++.++.+.++|.
T Consensus 314 ~~~~-~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 314 LVVA-ATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred ccee-cccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 5443 222221 124689999854 3444555555554
No 177
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.91 E-value=8.2e-22 Score=192.44 Aligned_cols=286 Identities=13% Similarity=0.130 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhc------CCCCEEEEeCCCchhhHhHHHHhccccccccccC
Q 013521 117 MALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLL------GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETG 189 (441)
Q Consensus 117 ~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 189 (441)
.++++.+|++ ++++++++++++|+++++.. +..+. ++||+|++++++|.++...++..|
T Consensus 62 ~~~~~~la~~----~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G---------- 127 (373)
T TIGR03812 62 EEVVGSLGNL----LHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLG---------- 127 (373)
T ss_pred HHHHHHHHHH----hCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcC----------
Confidence 4455555555 48888899999999998765 43332 467999999999999988888888
Q ss_pred ccceeEEeecCCCCCccCCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC--
Q 013521 190 KYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD-- 262 (441)
Q Consensus 190 ~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~-- 262 (441)
.+++.++.+.+. ..++++ .+++..++++.|+||||.+.+ +++|.++|+++|+++|+|++|+.+...
T Consensus 128 --~~~~~v~~~~~~--~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~ 200 (373)
T TIGR03812 128 --LELRYAPLDEDY--TVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFL 200 (373)
T ss_pred --CeEEEEeeCCCC--CcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHH
Confidence 588888876432 233221 244544455568999999988 888899999999999999999855321
Q ss_pred CCCCcccccC-CCcceeEEEecCCcccCCccceeEEEEe-eccccccCCchhHHHHHHHHhhhc--------CCCcHHHH
Q 013521 263 PSPRSIYEIP-GAREVAIEISSFSKFAGFTGVRLGWTVV-PEELRYSNGYPVIKDFNRIVCTCF--------NGASNIVQ 332 (441)
Q Consensus 263 ~~~~~~~~~~-~~~~~~i~i~S~SK~~~~~G~r~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 332 (441)
........++ .......+..|.+| +++++.++|+++. +++++ +.+........ .+.+....
T Consensus 201 ~~~~~~~~~d~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~gt~~~~~~ 271 (373)
T TIGR03812 201 KKGYNPPPFDFSLPGVQSITIDPHK-MGLSPIPAGGILFRSKSYL--------KYLSVDAPYLTVKKQATITGTRSGASA 271 (373)
T ss_pred hcCCCCCCccccCCCCCEEEECccc-cCCCcCCceEEEEeCHHHH--------hhhcccCcccCCCCCcceEeechhHHH
Confidence 0000000010 00112245567889 5567888986664 44442 22210000000 11223444
Q ss_pred HHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcC
Q 013521 333 AGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFG 412 (441)
Q Consensus 333 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~ 412 (441)
.++.+.++......+++..++..++++++.+.|+++|+....++..+++.+.+++ ..++.++|.+ +||.+.++.
T Consensus 272 ~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~~--~~~v~~~L~~-~gi~v~~~~--- 345 (373)
T TIGR03812 272 AATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPVLNIVAFEVDD--PEEVRKKLRD-RGWYVSVTR--- 345 (373)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCceEEEEEeCC--HHHHHHHHHH-CCceeccCC---
Confidence 4455555533334567888999999999999999887654333456778888763 3466666665 599997753
Q ss_pred CCCCCeEEEEee--cCHHHHHHHHHHHHhh
Q 013521 413 PGGNEHIRVSAF--GHREYISEACRRLKNF 440 (441)
Q Consensus 413 ~~~~~~iRls~~--~~~~~~~~~l~~l~~~ 440 (441)
.++++|+++. .++++++++++.|+++
T Consensus 346 --~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 346 --CPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred --CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 3568999974 5899999999999863
No 178
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.91 E-value=2e-23 Score=202.08 Aligned_cols=320 Identities=15% Similarity=0.158 Sum_probs=203.9
Q ss_pred CCcHHHHHHHHHHHhhccCCCCC--CCCCCC--cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhc----
Q 013521 85 PIPDIITSAMAEHAFALSTVKGY--KGYGAE--QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLL---- 155 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~--~~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~---- 155 (441)
++|+.+.+++.+.+......+.. ..++.. .-..++|+.+++++ ++++++|++|+|+++++++ +..+.
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~v~~~~g~t~a~~~~l~~l~~~~~ 84 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL----GADTEEVIFTSGATESNNLAILGLARAGE 84 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCCHHHHHHHHHHHHHHhcc
Confidence 57788999999987542210111 111110 12456777787775 8888999999999999987 55554
Q ss_pred CCC-CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCccccCC
Q 013521 156 GSN-VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPTGHAA 231 (441)
Q Consensus 156 ~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPtG~~~ 231 (441)
++| +.|++....|+++......+...| .+++.++.+.++.++++ +++ .++++++++++|+||||.++
T Consensus 85 ~~g~~~vi~~~~~~~s~~~~~~~~~~~G---------~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~ 155 (353)
T TIGR03235 85 QKGKKHIITSAIEHPAVLEPIRALERNG---------FTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQ 155 (353)
T ss_pred cCCCCeeeEcccccHHHHHHHHHHHhcC---------CEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceecc
Confidence 356 789888888887765554443222 48888888754333222 222 35789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCch
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYP 311 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~ 311 (441)
+ +++|+++|+++|+++|+|++++.... +..+.. .+..+++.|++|.+|.+| +|+++++++........
T Consensus 156 ~---~~~I~~l~~~~~~~~ivD~a~~~g~~---~~~~~~----~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~ 223 (353)
T TIGR03235 156 P---IREIAEVLEAHEAFFHVDAAQVVGKI---TVDLSA----DRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLK 223 (353)
T ss_pred C---HHHHHHHHHHcCCEEEEEchhhcCCc---cccccc----cCCCEEEeehhhcCCCCc--eEEEEEccCcccccccC
Confidence 9 78999999999999999999873221 222211 234588889999887555 89999888753110000
Q ss_pred --hHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCC---ceEEEEEcC
Q 013521 312 --VIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKN---APYVWVQFP 386 (441)
Q Consensus 312 --~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~~~~~ 386 (441)
.... .........+.+.....+..++++. .....++.+++++++++++++.|.+.|+++..++. ...+.+.++
T Consensus 224 ~~~~~~-~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~ 301 (353)
T TIGR03235 224 PIMFGG-GQERGLRPGTLPVHLIVGMGEAAEI-ARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSID 301 (353)
T ss_pred ceeeCC-CCcCccccCCCChHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeC
Confidence 0000 0000011122333333334444431 11345778899999999999999888888764332 234556666
Q ss_pred CCChHHHHHHHHHhcCeEEeCCCCcCCCC--CCeEEEEeecCHHHHHHH
Q 013521 387 GSSSWDVFAEILEKTHILTIPGSGFGPGG--NEHIRVSAFGHREYISEA 433 (441)
Q Consensus 387 ~~~~~~~~~~ll~~~gi~v~pg~~f~~~~--~~~iRls~~~~~~~~~~~ 433 (441)
+.+..++...| ++ +|.+.+|..|.... +.++|.+++.+++++..+
T Consensus 302 ~~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 302 GVNSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred CcCHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence 65555555554 56 89999999986443 457888877666555443
No 179
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.91 E-value=2.9e-22 Score=195.27 Aligned_cols=214 Identities=18% Similarity=0.263 Sum_probs=151.9
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH----HHHhccccccccc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT----SVIVGQAGKFLKE 187 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~ 187 (441)
.+-..++++.+|+++ +. +++++|+|+++|+.+ +..++++||+|+++.+.|++.... +...|
T Consensus 60 ~p~~~~le~~la~l~----g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G-------- 125 (390)
T PRK08133 60 NPTVTMFQERLAALE----GA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFG-------- 125 (390)
T ss_pred ChHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcC--------
Confidence 334678889999885 43 578899999999987 677889999999999999876543 33455
Q ss_pred cCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCc
Q 013521 188 TGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRS 267 (441)
Q Consensus 188 ~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~ 267 (441)
++++.++.++.+.+...+ .+++++|++++|+||||.+.+ +++|+++|+++|++||+|++|....... |
T Consensus 126 ----~~v~~vd~~d~~~l~~~i--~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~-p-- 193 (390)
T PRK08133 126 ----IETTFVDLTDLDAWRAAV--RPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ-P-- 193 (390)
T ss_pred ----cEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC-c--
Confidence 588888775322222111 368999999999999999998 8899999999999999999987433211 2
Q ss_pred ccccCCCcceeEEEecCCcccCCcccee-EEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHH
Q 013521 268 IYEIPGAREVAIEISSFSKFAGFTGVRL-GWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQA 346 (441)
Q Consensus 268 ~~~~~~~~~~~i~i~S~SK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 346 (441)
+ .. +..+++.|+||.++.+|.++ ||++++++. ++.+...........++..+. .++. +.+.
T Consensus 194 l-~~----g~Divv~S~sK~~~g~g~~~GG~vv~~~~~--------~~~~~~~~~~~g~~~~~~~a~---~~l~--gl~t 255 (390)
T PRK08133 194 L-KL----GADVVIHSATKYLDGQGRVLGGAVVGSKEL--------MEEVFGFLRTAGPTLSPFNAW---VFLK--GLET 255 (390)
T ss_pred h-hh----CCcEEEeecceeecCCcceEeEEEEcCHHH--------HHHHHHHHHHhCCCCCHHHHH---HHHc--ccch
Confidence 1 11 22488999999998889888 566666665 244443334333344444433 2332 3345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CC
Q 013521 347 LRTVIDYYKENAKIIVDAFQSL-GL 370 (441)
Q Consensus 347 ~~~~~~~~~~~~~~l~~~L~~~-g~ 370 (441)
+..+.+++.+++..+.+.|+++ ++
T Consensus 256 l~~R~~~~~~~a~~la~~L~~~p~v 280 (390)
T PRK08133 256 LSLRMEAHSANALALAEWLEAHPGV 280 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 5667778888999999999987 44
No 180
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.91 E-value=1.9e-22 Score=188.08 Aligned_cols=335 Identities=19% Similarity=0.210 Sum_probs=232.1
Q ss_pred EEeCCCCCCCCCcHHHHHHHHHHHhhc-cCCCCCCCCCC--CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-
Q 013521 75 IRLGIGDTTQPIPDIITSAMAEHAFAL-STVKGYKGYGA--EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR- 150 (441)
Q Consensus 75 i~l~~g~~~~~~~~~~~~al~~~~~~~-~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~- 150 (441)
|.|+.+.. .|+.+.+.++|...+... +++...+.|+. .....+.|+.||+.+ ++++++|++|+|+|++.++
T Consensus 3 iYlD~~AT-Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll----ga~~~eIiFTSG~TEsnNla 77 (386)
T COG1104 3 IYLDNAAT-TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL----GADPEEIIFTSGATESNNLA 77 (386)
T ss_pred cccccccc-CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh----CCCCCeEEEecCCcHHHHHH
Confidence 45554443 356788999999988766 55566677753 345567788888876 9999999999999999997
Q ss_pred HHH--hc----CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEc
Q 013521 151 LQM--LL----GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFC 221 (441)
Q Consensus 151 l~~--l~----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~ 221 (441)
|.. .. +.|..|++..-.|+.+.+.++.+..+| .+|.++|++.++-.+++ +++ .+++.+|-+.
T Consensus 78 I~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g---------~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim 148 (386)
T COG1104 78 IKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQG---------FEVTYLPVDSNGLVDLEQLEEALRPDTILVSIM 148 (386)
T ss_pred HHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcC---------CeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEE
Confidence 655 22 247899999999999999999883333 49999999986544433 222 3678888888
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
..||-||++.| +++|.++|+++++++.+|.+..- +..|..+..+ ..++..-|-+|+.|..| +|.++.+
T Consensus 149 ~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~---Gkipi~~~~~----~vD~ls~SaHK~~GpkG--iGaLyv~ 216 (386)
T COG1104 149 HANNETGTIQP---IAEIGEICKERGILFHVDAVQAV---GKIPIDLEEL----GVDLLSFSAHKFGGPKG--IGALYVR 216 (386)
T ss_pred ecccCeeeccc---HHHHHHHHHHcCCeEEEehhhhc---Cceecccccc----CcceEEeehhhccCCCc--eEEEEEC
Confidence 88999999999 88999999999999999999872 2224444332 13477778899999777 8888875
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCC---
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL--GLKVNGGK--- 376 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~--- 376 (441)
+.........--.+-...++ .+.+.+...+...+++ ...+.++....++.+.++.+.+.|.+. ++.+.+..
T Consensus 217 ~~~~~~p~i~GGgQE~g~Rs---GTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~r 292 (386)
T COG1104 217 PGVRLEPLIHGGGQERGLRS---GTENVPGIVGFGKAAE-IAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPR 292 (386)
T ss_pred CCCccCceeccCcCCCCCCC---CCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccC
Confidence 54421000000000011112 2234444444444444 334556777888889999999999875 45554332
Q ss_pred CceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCC-----------------CCCeEEEEee--cCHHHHHHHHHHH
Q 013521 377 NAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPG-----------------GNEHIRVSAF--GHREYISEACRRL 437 (441)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----------------~~~~iRls~~--~~~~~~~~~l~~l 437 (441)
-.+.+.+.+++...+.+ ...|+.+||.+..|+.|... ..+.|||||+ +++++++.+++.|
T Consensus 293 lP~~~~~~f~gv~gE~l-l~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l 371 (386)
T COG1104 293 LPNILNFSFPGVEGESL-LLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEAL 371 (386)
T ss_pred CCCeEEEEeCCCcHHHH-HHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHH
Confidence 23457777887665555 44566679999999998532 1367999984 4899999999998
Q ss_pred Hhh
Q 013521 438 KNF 440 (441)
Q Consensus 438 ~~~ 440 (441)
.++
T Consensus 372 ~~~ 374 (386)
T COG1104 372 KEI 374 (386)
T ss_pred HHH
Confidence 875
No 181
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.91 E-value=3e-22 Score=194.24 Aligned_cols=220 Identities=17% Similarity=0.271 Sum_probs=155.1
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFL 185 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~ 185 (441)
+.+| +.+-..+|++++|++. + .+++++|+|+++++.+ +..++++||+|+++.|+|++....+......+.
T Consensus 45 Y~R~-~~p~~~~le~~lA~l~----g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~-- 115 (382)
T TIGR02080 45 YSRS-GNPTRDLLQQALAELE----G--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC-- 115 (382)
T ss_pred ccCC-CCchHHHHHHHHHHHh----C--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC--
Confidence 4456 4456788999999985 3 4789999999999998 677899999999999999976655544321111
Q ss_pred cccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC
Q 013521 186 KETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263 (441)
Q Consensus 186 ~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~ 263 (441)
.++..++.+ + ..++++ .+++|+|++++|+||||.+++ +++|+++|+++|+++|+|++|..+....
T Consensus 116 ------~~v~~~d~~---d-~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~ 182 (382)
T TIGR02080 116 ------FRVLFVDQG---D-EQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN 182 (382)
T ss_pred ------eEEEEECCC---C-HHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 245554321 1 111221 357899999999999999999 7788899999999999999998543321
Q ss_pred CCCcccccCCCcceeEEEecCCcccC-CccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCC
Q 013521 264 SPRSIYEIPGAREVAIEISSFSKFAG-FTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPD 342 (441)
Q Consensus 264 ~~~~~~~~~~~~~~~i~i~S~SK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 342 (441)
+ + .+ + ..+++.|+||.++ .++++.|+++++++.+ .+.+...+.......+++....+. .
T Consensus 183 -p--l-~~-g---aDivv~S~sK~l~G~~~~~~G~i~~~~~~~-------~~~l~~~~~~~g~~~sp~~a~l~l-----r 242 (382)
T TIGR02080 183 -P--L-AL-G---ADLVLHSCTKYLNGHSDVIAGAVIAKDPQV-------AEELAWWANNLGVTGGAFDSYLTL-----R 242 (382)
T ss_pred -c--h-hh-C---CCEEEeecceeccCCCCceeEEEEeCCHHH-------HHHHHHHHHccCCCCCHHHHHHHH-----c
Confidence 2 2 12 1 1388999999885 4688999988755443 455555555555556666544332 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 343 GFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
+.+.+..+.++.+++...+.+.|+++
T Consensus 243 ~l~tl~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 243 GLRTLVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 34445666778888999999999987
No 182
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.91 E-value=6.5e-23 Score=203.11 Aligned_cols=336 Identities=11% Similarity=0.108 Sum_probs=214.6
Q ss_pred CCCCeEEeCCCCCCC---CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDTTQ---PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~---~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|.... ..++.+.+++.+.+.+. . ..+.+..+..+|+++|++++ +. .++|++++|+++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~----~-~~~~~~~~~~~lae~l~~~~----~~-~~~v~~~~sGse 115 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG----T-SYGAPTEAEILLAKEIISRV----PS-VEMVRFVNSGTE 115 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhC----C-cCCCCCHHHHHHHHHHHHhC----Cc-ccEEEEeCCHHH
Confidence 456789998776432 47899999999988752 1 11225568899999999985 22 368999999999
Q ss_pred HHHH-HH--HhcCCCCEEEEeCCCchhhHhHHHHhcccccc------ccccCc--cceeEEeecCCCCCccCCCCC----
Q 013521 147 DISR-LQ--MLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKF------LKETGK--YRNIVYMNCRPENNFFPDLST---- 211 (441)
Q Consensus 147 al~~-l~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~------~~~~~~--~~~v~~v~~~~~~~~~~~~~~---- 211 (441)
|+.. +. .....+++|+...++|++....+......+.. .+.... ...+..++.. + ..++++
T Consensus 116 A~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d-~~~l~~~i~~ 191 (423)
T TIGR00713 116 ATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYN---D-LEALEEVFEE 191 (423)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCC---C-HHHHHHHHHH
Confidence 9986 42 22345689999999999975433321111100 000000 0012222221 1 111111
Q ss_pred -CCCccEEEEc-CCCCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCccc
Q 013521 212 -TSRTDIIFFC-SPNNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFA 288 (441)
Q Consensus 212 -~~~~~~v~i~-~p~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 288 (441)
..++++|++. .|+| +|.+++ ++.+++|.++|++||+++|+||+|..+..+... ......-.+| +.+|||.+
T Consensus 192 ~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~-~~~~~~~~pD----i~t~sK~l 265 (423)
T TIGR00713 192 YGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGG-AQEYFGVEPD----LTTLGKII 265 (423)
T ss_pred cCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcch-hHHHhCCCcc----hhhhhhhh
Confidence 1467788875 7788 798887 689999999999999999999999877443211 1111221234 34799999
Q ss_pred CCccceeEEEEeeccccccCCchhHHHHHH---HHhhhcCCCcHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHHH
Q 013521 289 GFTGVRLGWTVVPEELRYSNGYPVIKDFNR---IVCTCFNGASNIVQAGGLACLSPDG-FQALRTVIDYYKENAKIIVDA 364 (441)
Q Consensus 289 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~ 364 (441)
+ +|+|+||++++++++ +.+.. .......+.+++.+.++.+.++... ....++.++..+..++.+.+.
T Consensus 266 ~-~G~pig~v~~~~~i~--------~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 336 (423)
T TIGR00713 266 G-GGLPVGAFGGRREIM--------ERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEV 336 (423)
T ss_pred c-CCCceeeeeEHHHHH--------HhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 8 999999999998873 33331 1122344578899998888886211 124567777777777888888
Q ss_pred HHhCCCeee-CCCCceE-EEEEcCCC---------Ch---HHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHH
Q 013521 365 FQSLGLKVN-GGKNAPY-VWVQFPGS---------SS---WDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYI 430 (441)
Q Consensus 365 L~~~g~~~~-~~~~~~~-~~~~~~~~---------~~---~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~ 430 (441)
++++++... ...++++ +++..+.. +. ..+...+++ +||.+.++ .| +.+|++...+++++
T Consensus 337 ~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~-~~-----~~~~l~~~~t~~~i 409 (423)
T TIGR00713 337 LEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPS-QF-----EACFLSAAHTEEDI 409 (423)
T ss_pred HHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecC-Cc-----cceeeECCCCHHHH
Confidence 887765542 2223332 44442211 11 135556665 59998754 22 35788877799999
Q ss_pred HHHHHHHHhhC
Q 013521 431 SEACRRLKNFL 441 (441)
Q Consensus 431 ~~~l~~l~~~l 441 (441)
++++++|.+++
T Consensus 410 ~~~~~~l~~~l 420 (423)
T TIGR00713 410 ENTIEAAEEVF 420 (423)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 183
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.91 E-value=6.5e-22 Score=194.47 Aligned_cols=334 Identities=13% Similarity=0.106 Sum_probs=209.2
Q ss_pred CCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..|- ..+ ..+|.+.+++.+.+.+... ....|. .....+|.+.+++. .+ .+.+++++++++|
T Consensus 38 G~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~--~~~~~~-~~~~~~la~~l~~~----~~--~~~v~~~~sGseA 108 (406)
T PRK12381 38 GKEYIDFAGGIAVNALGHAHPALREALNEQASKFWH--TGNGYT-NEPVLRLAKKLIDA----TF--ADRVFFCNSGAEA 108 (406)
T ss_pred CCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhccc--ccCccC-CHHHHHHHHHHHhh----CC--CCeEEEcCCcHHH
Confidence 45688886652 112 2478999999998875321 111232 22234555555554 22 4799999999999
Q ss_pred HHHHHHhc---------CCCCEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCCCccCCCCC--CCCc
Q 013521 148 ISRLQMLL---------GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPENNFFPDLST--TSRT 215 (441)
Q Consensus 148 l~~l~~l~---------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~ 215 (441)
+.....+. .++..|+..+.+|++........+....+.. .......+..++..+- .++++ .+++
T Consensus 109 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----~~l~~~l~~~~ 184 (406)
T PRK12381 109 NEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDL----NSASALIDDQT 184 (406)
T ss_pred HHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCH----HHHHHhccCCe
Confidence 88632221 2457899999999997654433332110000 0000001222222110 11111 2467
Q ss_pred cEEEEcCCCCccccCC--CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccc
Q 013521 216 DIIFFCSPNNPTGHAA--TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGV 293 (441)
Q Consensus 216 ~~v~i~~p~NPtG~~~--~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~ 293 (441)
++|++ +|.||+|-++ +.+.+++|.++|++||+++|+||+|..+...+.........-.+| +.||||.++ +|+
T Consensus 185 aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD----i~t~sK~l~-gG~ 258 (406)
T PRK12381 185 CAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----VLTTAKALG-GGF 258 (406)
T ss_pred eEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC----EEEehhhhh-CCC
Confidence 67665 8999998765 799999999999999999999999987755543222112221234 359999998 999
Q ss_pred eeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC--Ce
Q 013521 294 RLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG--LK 371 (441)
Q Consensus 294 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~ 371 (441)
|+||++++++++ +.+.........+.+++.+.++.+.++.. .-.+++++++++.+++.+.|++++ ..
T Consensus 259 ~ig~~~~~~~~~--------~~~~~~~~~~t~~~~pl~~aaa~a~l~~l---~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 327 (406)
T PRK12381 259 PIGAMLTTEKCA--------SVMTVGTHGTTYGGNPLASAVAGKVLELI---NTPEMLNGVKQRHDWFVERLNTINARYG 327 (406)
T ss_pred ceEEEEEcHHHH--------hhcCCCCCCCCCCCCHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999999998873 33432222334457888888888877521 124567888888889988888763 21
Q ss_pred --eeCCCCceEEEEEcCCC---ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 372 --VNGGKNAPYVWVQFPGS---SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 372 --~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
......|.++|+.++.. ....+... +.++||.+.+. +++.+|++. ..+++++++++++|.+++
T Consensus 328 ~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~-l~~~Gv~v~~~------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l 397 (406)
T PRK12381 328 LFSEIRGLGLLIGCVLNAEYAGKAKQISQE-AAKAGVMVLIA------GPNVVRFAPALNISEEEITTGLDRFARAC 397 (406)
T ss_pred CEEEEecCeEEEEEEecCchhhHHHHHHHH-HHHCCcEEeeC------CCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence 11223578889988632 22344444 55569999763 246899986 368999999999998763
No 184
>PLN02651 cysteine desulfurase
Probab=99.91 E-value=5e-22 Score=193.00 Aligned_cols=317 Identities=16% Similarity=0.177 Sum_probs=201.5
Q ss_pred CCcHHHHHHHHHHHhhccCCCCC--CCCCC--CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHh----c
Q 013521 85 PIPDIITSAMAEHAFALSTVKGY--KGYGA--EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQML----L 155 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~--~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l----~ 155 (441)
+.|+.+.+++.+.+......+.. +.+.. ..-..++|+.+++++ +.++++|++|+|+++++++ +..+ .
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~v~~t~~~t~a~~~~l~~~~~~~~ 85 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI----GADPKEIIFTSGATESNNLAIKGVMHFYK 85 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCCHHHHHHHHHHHHHHhcc
Confidence 57788999998877542110111 11111 112445566666664 8888999999999999876 4332 4
Q ss_pred CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCccccCCC
Q 013521 156 GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPTGHAAT 232 (441)
Q Consensus 156 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPtG~~~~ 232 (441)
++||+|++....|+++...+..+...| .+++.++.+.++.++++ +++ .++++++++++++||||.++|
T Consensus 86 ~~g~~vl~~~~~h~s~~~~~~~~~~~g---------~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~ 156 (364)
T PLN02651 86 DKKKHVITTQTEHKCVLDSCRHLQQEG---------FEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP 156 (364)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHhcC---------CEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc
Confidence 789999999989988766554433222 47888888654332221 221 367899999999999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchh
Q 013521 233 WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPV 312 (441)
Q Consensus 233 ~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~ 312 (441)
+++|.++|+++|+++++|.+++.... +..+..+ +..+++.|.+|++| ...+|+++++++.+....+..
T Consensus 157 ---l~~I~~~~~~~g~~~~vD~a~~~g~~---~~~~~~~----~~D~~~~s~hK~~g--p~G~g~l~v~~~~~~~l~p~~ 224 (364)
T PLN02651 157 ---VEEIGELCREKKVLFHTDAAQAVGKI---PVDVDDL----GVDLMSISGHKIYG--PKGVGALYVRRRPRVRLEPLM 224 (364)
T ss_pred ---HHHHHHHHHHcCCEEEEEcchhhCCc---ccCcccC----CCCEEEechhhhCC--CCceEEEEEcCCCCCCCCccc
Confidence 88999999999999999999983211 2222222 34599999999754 345999998887642211110
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCC-----ceEEEEEc
Q 013521 313 IKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQS-L-GLKVNGGKN-----APYVWVQF 385 (441)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~-----~~~~~~~~ 385 (441)
.. ..........+.+.....++.++++. -....++.+++.++..+++.+.|++ + |+++..+.. ...+.+.+
T Consensus 225 ~g-~~~~~~~~~GT~~~~~~~~l~~al~~-~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~ 302 (364)
T PLN02651 225 SG-GGQERGRRSGTENTPLVVGLGAACEL-AMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSF 302 (364)
T ss_pred cC-CCccCCccCCCccHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEe
Confidence 00 00000011223444444444444431 1123467778888888999998875 4 788776411 33666777
Q ss_pred CCCChHHHHHHHHHhcCeEEeCCCCcCCC-----------------CCCeEEEEe--ecCHHHHH
Q 013521 386 PGSSSWDVFAEILEKTHILTIPGSGFGPG-----------------GNEHIRVSA--FGHREYIS 431 (441)
Q Consensus 386 ~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----------------~~~~iRls~--~~~~~~~~ 431 (441)
++.+..++...| ++ |.++.|+.+... ..+.||+|+ +++++|++
T Consensus 303 ~~~~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 303 AYVEGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 766777776665 33 999999876432 137899997 55788764
No 185
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=1.5e-21 Score=188.58 Aligned_cols=298 Identities=14% Similarity=0.127 Sum_probs=196.0
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCC----
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNV---- 159 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd---- 159 (441)
.+|+.+++++.++..+ |. +..++++++++++.+.++. +++++|+|+++++.+ +..++++||
T Consensus 24 ~~~~~v~~a~~~~~~~---------~~---~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~al~~~Gd~~~~ 89 (363)
T TIGR01437 24 TVSDEVADAQKRGAQN---------YF---EIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVAAVITRGNRYLV 89 (363)
T ss_pred CCCHHHHHHHHHHHhc---------CC---CHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHHHHhcCCCcchh
Confidence 3789999999998643 32 3456777777777665564 478999999999997 788888998
Q ss_pred -----------EEEEeCCCchhh----HhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEE-E
Q 013521 160 -----------TVAVQDPSFPAY----IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIF-F 220 (441)
Q Consensus 160 -----------~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~-i 220 (441)
+|+++.|.|..+ .......| .++++++.+ ...+++ +++ .+++++++ +
T Consensus 90 ~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g------------~~~v~v~~~--~~~d~~~le~ai~~~t~ai~~v 155 (363)
T TIGR01437 90 ENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGG------------GKVVEAGYA--NECSAEQLEAAITEKTAAILYI 155 (363)
T ss_pred hcccccccccceEEEECccchhcCCchHHHHHhcC------------CeEEEEcCC--CCCCHHHHHHhcChhceEEEEE
Confidence 999999888765 34555566 477777653 222221 222 46788766 5
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 221 CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 221 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
++|+||+|.+.+ +++|+++|++||+++|+|++|+. + ..+...+ +..+++.|++|.+ +|++.|+++.
T Consensus 156 ~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~---~--~~~~~~~----g~D~~~~S~~K~l--~gp~~G~l~~ 221 (363)
T TIGR01437 156 KSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE---D--LQKYYRL----GADLVIYSGAKAI--EGPTSGLVLG 221 (363)
T ss_pred ecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC---c--hHHHHHc----CCCEEEEeCCccc--CCCceEEEEE
Confidence 688999999999 67899999999999999999972 1 1112222 1248889999987 5788999998
Q ss_pred eccccccCCchhHHHHHHHHhhh-----cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeC
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTC-----FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNG 374 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 374 (441)
+++++ +......... ....+..++.+++..+.+.+. ...+.+.++++.+.+.|++. |+.+..
T Consensus 222 ~~~~i--------~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~----~~~~~~~~~~~~l~~~L~~i~g~~~~~ 289 (363)
T TIGR01437 222 KKKYI--------EWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGK----ESGAEMVAKLTPFIEALNTLKGVSASI 289 (363)
T ss_pred cHHHH--------HHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCc----ccHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 77664 2221111100 011223455555555543232 23344455677899999987 887653
Q ss_pred CC--Cc-----eEEEEEcC--CCChHHHHHHHHHhcC--eEEeCCCCcCCCCCCeEEEEee-cCHHHHHHHHHHHHhhC
Q 013521 375 GK--NA-----PYVWVQFP--GSSSWDVFAEILEKTH--ILTIPGSGFGPGGNEHIRVSAF-GHREYISEACRRLKNFL 441 (441)
Q Consensus 375 ~~--~~-----~~~~~~~~--~~~~~~~~~~ll~~~g--i~v~pg~~f~~~~~~~iRls~~-~~~~~~~~~l~~l~~~l 441 (441)
+. .+ +-+.++.. +.+..++.+.|. ++| |.+++ .| ...+.+|++.. .+++|++.++++|++++
T Consensus 290 ~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~-~~~~~I~~r~--~~--~~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 290 VQDEAGRDIARAEIRFDESELGMTAADVVQALR-QGEPAIYTRG--YK--ANEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred ecCCCCCcCceEEEEEeccCCCCCHHHHHHHHh-cCCCCEEEee--ee--ecCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 21 11 11334442 445667766654 446 77665 22 23567999974 47999999999999875
No 186
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=7.9e-22 Score=191.41 Aligned_cols=220 Identities=14% Similarity=0.209 Sum_probs=157.3
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFL 185 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~ 185 (441)
+.+| +++....|++++|++. + .+++++++|+++++.+ +..++++||+|+++.|+|++....+......+.
T Consensus 46 Y~R~-~~pt~~~L~~~lA~l~----g--~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g-- 116 (386)
T PRK08045 46 YSRR-GNPTRDVVQRALAELE----G--GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC-- 116 (386)
T ss_pred eeCC-CCccHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC--
Confidence 4456 4456789999999985 4 3479999999999998 577889999999999999975554443321111
Q ss_pred cccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC
Q 013521 186 KETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263 (441)
Q Consensus 186 ~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~ 263 (441)
.++..++.. + ..++++ .+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 117 ------i~v~~vd~~---d-~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~- 182 (386)
T PRK08045 117 ------YRVLFVDQG---D-EQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQ- 182 (386)
T ss_pred ------eEEEEeCCC---C-HHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC-
Confidence 245554321 1 111111 357899999999999999999 778888899999999999999854321
Q ss_pred CCCcccccCCCcceeEEEecCCcccC-CccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCC
Q 013521 264 SPRSIYEIPGAREVAIEISSFSKFAG-FTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPD 342 (441)
Q Consensus 264 ~~~~~~~~~~~~~~~i~i~S~SK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 342 (441)
.++ .. ...+++.|+||.++ .++++.|+++++++.+ .+.+...........+++.+..+...++
T Consensus 183 --~pl-~~----gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~-------~~~l~~~~~~~g~~~~p~~~~l~~rgl~-- 246 (386)
T PRK08045 183 --NPL-AL----GADLVLHSCTKYLNGHSDVVAGVVIAKDPDV-------VTELAWWANNIGVTGGAFDSYLLLRGLR-- 246 (386)
T ss_pred --Cch-hh----CCCEEEeecceeccCCCCceeEEEEeCcHHH-------HHHHHHHHHhcCCCCCHHHHHHHHhhhc--
Confidence 222 11 11389999999885 4567899998754332 4555555555556677787766666554
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 343 GFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
.+..+.++..+++..+.+.|+++
T Consensus 247 ---tl~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 247 ---TLVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHcC
Confidence 35777888899999999999987
No 187
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.90 E-value=1.3e-21 Score=190.18 Aligned_cols=332 Identities=14% Similarity=0.144 Sum_probs=219.0
Q ss_pred CCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCCC--CCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGYK--GYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al 148 (441)
+++++|+.+++ ++...|.+.++..+++++++...... -++...-..+|.++||+|+ + .++.+++.+|....+
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~----g-~e~all~sSGy~AN~ 176 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK----K-KEDCLVCPTGFAANM 176 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH----C-CCcEEEECChHHHHH
Confidence 47899999985 67788999999999999887422211 1222334478999999996 4 356788888888877
Q ss_pred HHHHHh--------------cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCC-C
Q 013521 149 SRLQML--------------LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTT-S 213 (441)
Q Consensus 149 ~~l~~l--------------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~-~ 213 (441)
.++..+ .+++|.|+.....|.+....++....++. .++..++.++-+.+...+... .
T Consensus 177 ~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~--------a~~~~f~HND~~~Le~~L~~~~~ 248 (476)
T PLN02955 177 AAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGN--------VEVFVYRHCDMYHLNSLLSSCKM 248 (476)
T ss_pred HHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCC--------ceEEEeCCCCHHHHHHHHHhCCC
Confidence 776554 25667899999999999988887743221 356666654322221112222 2
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccc-cCCCcceeEEEecCCcccCCcc
Q 013521 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYE-IPGAREVAIEISSFSKFAGFTG 292 (441)
Q Consensus 214 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~~~~G 292 (441)
+.++|++..-.++.|.+.| +++|.++|++||+++|+||+|+.+..+.....+.. +.-.++++|+++||||.+|..|
T Consensus 249 ~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G 325 (476)
T PLN02955 249 KRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG 325 (476)
T ss_pred CceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC
Confidence 3344444344899999999 88888888999999999999998777654333333 2223577899999999998777
Q ss_pred ceeEEEEeeccccccCCchhHHHHHHHHhh-hcCC-CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 013521 293 VRLGWTVVPEELRYSNGYPVIKDFNRIVCT-CFNG-ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGL 370 (441)
Q Consensus 293 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 370 (441)
||+++++++ ++.+...... .+.+ .+++...++.+.++.. ..-...+++++++.+++.+. .|+
T Consensus 326 ---Gfi~gs~~~--------~~~l~~~~~~~ifStalpp~~aaa~laal~l~--~~~~~~r~~L~~n~~~fr~~---~G~ 389 (476)
T PLN02955 326 ---GFIACSKKW--------KQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVA--RKEKWRRKAIWERVKEFKAL---SGV 389 (476)
T ss_pred ---ceeecHHHH--------HHHHHHhCCCCeecccccHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHh---cCC
Confidence 999998876 3444432222 2222 2233334444444311 01134567777888877773 255
Q ss_pred eeeCCCCceEEEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 371 KVNGGKNAPYVWVQFPGS-SSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
.. .++.+.+.+... ...++.++|+++ ||.+.+...-. +.+...+||++ .+++++++++++.|.++
T Consensus 390 ~~----~sPI~pI~ig~~~~a~~~~~~L~~~-Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~ 458 (476)
T PLN02955 390 DI----SSPIISLVVGNQEKALKASRYLLKS-GFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSC 458 (476)
T ss_pred CC----CCCEEEEEeCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHH
Confidence 43 366777776532 334556666655 99998865433 34556899998 44899999999999764
No 188
>PRK07505 hypothetical protein; Provisional
Probab=99.90 E-value=9.9e-22 Score=193.37 Aligned_cols=332 Identities=14% Similarity=0.108 Sum_probs=192.0
Q ss_pred CCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccC-CCCCC--CCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 71 DARLIRLGIGDT-TQPIPDIITSAMAEHAFALST-VKGYK--GYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 71 ~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~-~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
++..+|+....+ ++..+|.+.+++.+.+.+++. ..... .+ ......++++.|++++ +. +.+++++|+..
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~-~~~~~~~l~~~la~~~----~~--~~~~~~sG~~a 117 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRV-RSQILKDLEEALSELF----GA--SVLTFTSCSAA 117 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhh-hhHHHHHHHHHHHHHh----CC--CEEEECChHHH
Confidence 456889976543 336789999999999986531 01111 12 2234566677777664 54 66777777664
Q ss_pred HHHHHHH----hcCCCC-EEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEE
Q 013521 147 DISRLQM----LLGSNV-TVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIF 219 (441)
Q Consensus 147 al~~l~~----l~~~gd-~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~ 219 (441)
...++.. +..+|+ .|++.+..|++-..........+ .+++.+|..+-+ ++++ .+++++++
T Consensus 118 ~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~---------~~v~~~~~~d~~----~l~~~~~~~~~~~v 184 (402)
T PRK07505 118 HLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADE---------TEVETIDHNDLD----ALEDICKTNKTVAY 184 (402)
T ss_pred HHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcC---------CeEEEeCCCCHH----HHHHHHhcCCCEEE
Confidence 4434422 222232 36666666654221111110000 256666653211 1221 24568899
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCcccccCC-CcceeEEEecCCcccCCccceeE
Q 013521 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS--PRSIYEIPG-AREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 220 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~--~~~~~~~~~-~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
+++|+||||.+++ +++|.++|++||+++|+||+|+...+... ......+.. .++++++++||||.+|.+| |
T Consensus 185 l~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g 258 (402)
T PRK07505 185 VADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---G 258 (402)
T ss_pred EEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---e
Confidence 9999999999999 78888999999999999999864333321 111222332 4678899999999999776 8
Q ss_pred EEEee-ccccccCCchhHHHHHHHHhhhcC--CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 013521 297 WTVVP-EELRYSNGYPVIKDFNRIVCTCFN--GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVN 373 (441)
Q Consensus 297 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 373 (441)
|++++ +++ .+.+......... +++.++..++.+.++-...+++.++.+.++++.+.+...+... .
T Consensus 259 ~~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~- 326 (402)
T PRK07505 259 VIMLGDAEQ--------IELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE---Q- 326 (402)
T ss_pred EEEeCCHHH--------HHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc---C-
Confidence 88754 344 3444432222111 2345666666666541111223444555555555443332211 1
Q ss_pred CCCCceEEEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEee--cCHHHHHHHHHHHHhhC
Q 013521 374 GGKNAPYVWVQFPGS-SSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSAF--GHREYISEACRRLKNFL 441 (441)
Q Consensus 374 ~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~~--~~~~~~~~~l~~l~~~l 441 (441)
.....++.++.++.. ...++.+.|++ +||.+.++..+. +.+.++|||++. .+++++++++++|++++
T Consensus 327 ~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l 397 (402)
T PRK07505 327 SGSFLPIRLIYIGDEDTAIKAAKQLLD-RGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEIL 397 (402)
T ss_pred CCCCCCEEEEEeCCHHHHHHHHHHHHH-CCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHH
Confidence 111222334444321 24566777765 599999974332 223478999974 58999999999998763
No 189
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.90 E-value=1.1e-21 Score=191.25 Aligned_cols=259 Identities=17% Similarity=0.180 Sum_probs=167.7
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFL 185 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~ 185 (441)
+.+| +++-..+|++.+|++. +. .+.|++.+| ++++.. +..++++||+|+++.|.|++....+.....+..
T Consensus 55 y~r~-~~pt~~~Le~~lA~l~----G~-~~al~~~sG-~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g-- 125 (386)
T PRK06767 55 YSRL-GNPTVKLFEERMAVLE----GG-EEALAFGSG-MAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM-- 125 (386)
T ss_pred ccCC-CCcchHHHHHHHHHHh----CC-CcEEEECCH-HHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC--
Confidence 3345 4455789999999986 53 355656555 567776 677889999999999999887666554432111
Q ss_pred cccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC
Q 013521 186 KETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263 (441)
Q Consensus 186 ~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~ 263 (441)
+++..++..+. .++++ .+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 126 ------i~~~~~~~~d~----~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~- 191 (386)
T PRK06767 126 ------ITHSFCDMETE----ADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ- 191 (386)
T ss_pred ------eEEEEeCCCCH----HHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence 24444443211 11221 357899999999999999999 788888999999999999999742221
Q ss_pred CCCcccccCCCcceeEEEecCCcccCCcccee-EEEEeeccccccCCchhHHHH-HHHHhhhcCCCcHHHHHHHHHhcCC
Q 013521 264 SPRSIYEIPGAREVAIEISSFSKFAGFTGVRL-GWTVVPEELRYSNGYPVIKDF-NRIVCTCFNGASNIVQAGGLACLSP 341 (441)
Q Consensus 264 ~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~l~~ 341 (441)
.++ .. +..+++.|+||.++.+|.|+ ||++++++.+ +.. ...........+++.+.++...+
T Consensus 192 --~pl-~~----g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i--------~~~~~~~~~~~g~~~~~~~a~l~~~~L-- 254 (386)
T PRK06767 192 --RPL-EL----GCDAVVHSATKYIGGHGDVVAGVTICKTRAL--------AEKIRPMRKDIGGIMAPFDAWLLLRGL-- 254 (386)
T ss_pred --Cch-hc----CCcEEEecCcceecCCCCceeEEEEeChHHH--------HHHHHHHHHHhCCCCCHHHHHHHHcCC--
Confidence 122 11 22488899999998788885 8999988764 232 22233233334555444333333
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhC-CCee-eCC----------CCceEEEEEcCCC--ChHHHHHHHHHhcCeEEeC
Q 013521 342 DGFQALRTVIDYYKENAKIIVDAFQSL-GLKV-NGG----------KNAPYVWVQFPGS--SSWDVFAEILEKTHILTIP 407 (441)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~----------~~~~~~~~~~~~~--~~~~~~~~ll~~~gi~v~p 407 (441)
+.+..+.++.+++.+.+.+.|+++ +++. .-| ..|..+.+++++. ....++.. ++..++.++-
T Consensus 255 ---~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~-l~~~~~~~s~ 330 (386)
T PRK06767 255 ---KTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFIND-LHFITIAVSL 330 (386)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHh-CCccEEecCC
Confidence 233556678899999999999987 6653 211 1344677777632 22344444 3455666665
Q ss_pred CC
Q 013521 408 GS 409 (441)
Q Consensus 408 g~ 409 (441)
|.
T Consensus 331 G~ 332 (386)
T PRK06767 331 GD 332 (386)
T ss_pred CC
Confidence 54
No 190
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.90 E-value=2.2e-21 Score=191.04 Aligned_cols=333 Identities=13% Similarity=0.105 Sum_probs=208.0
Q ss_pred CCCeEEeCCCCCCCC---CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQP---IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~---~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..|-.... .+|.+.+++.+.+..... ....+ ......++.+.++++. + .+.+++++++++|
T Consensus 40 g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~--~~~~~-~~~~~~~l~~~l~~~~----~--~~~~~~~~SGs~A 110 (401)
T PRK00854 40 GNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTL--TSRAF-RNDQLAPLYEELAALT----G--SHKVLPMNSGAEA 110 (401)
T ss_pred CCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccc--ccccc-CCHHHHHHHHHHHhhC----C--CCEEEEeCCcHHH
Confidence 456788766643322 378899999999876432 11112 2334556666676653 3 3589999999999
Q ss_pred HHH-HHHhcC---------CC-CEEEEeCCCchhhHhHHHHhccccc----cccccCccceeEEeecCCCCCccCCCCCC
Q 013521 148 ISR-LQMLLG---------SN-VTVAVQDPSFPAYIDTSVIVGQAGK----FLKETGKYRNIVYMNCRPENNFFPDLSTT 212 (441)
Q Consensus 148 l~~-l~~l~~---------~g-d~Vlv~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~v~~v~~~~~~~~~~~~~~~ 212 (441)
+.. +..+.. +| ++|++..-+|++....+...+.... +.... ..+..++..+.+.+...+ .
T Consensus 111 ~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~le~~i--~ 185 (401)
T PRK00854 111 VETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFT---PGFRVVPFGDAEALEAAI--T 185 (401)
T ss_pred HHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCC---CCeEEeCCCCHHHHHHHh--C
Confidence 886 433321 23 6888888888775433333221110 00000 123344332111111111 2
Q ss_pred CCccEEEEcCCCCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCc
Q 013521 213 SRTDIIFFCSPNNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFT 291 (441)
Q Consensus 213 ~~~~~v~i~~p~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~ 291 (441)
+++++|++++|+||+|.+++ .+.+++|.++|++||+++|+||+|..+...+.........-.+|.+ + +||.++ .
T Consensus 186 ~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~--~--~~K~l~-g 260 (401)
T PRK00854 186 PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVT--L--IGKALS-G 260 (401)
T ss_pred CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEE--E--eccccc-C
Confidence 57899999999999999997 4569999999999999999999998665443211111111123432 2 479997 5
Q ss_pred c-ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 013521 292 G-VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGL 370 (441)
Q Consensus 292 G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 370 (441)
| +|+||++++++++ +.+.........+.+++.+.++.+.|+... + ....+.++++.+++.+.|++++.
T Consensus 261 g~~~ig~v~~~~~~~--------~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~-~--~~~~~~~~~~~~~l~~~L~~~~~ 329 (401)
T PRK00854 261 GFYPVSAVLSNSEVL--------GVLKPGQHGSTFGGNPLACAVARAALKVLT-E--EGMIENAAEMGAYFLEGLRSIRS 329 (401)
T ss_pred CccCeEEEEEcHHHH--------hcccCCCCCCCCCcCHHHHHHHHHHHHHHH-H--cCHHHHHHHHHHHHHHHHHhhcc
Confidence 5 7999999998874 333222222334468888988888886211 1 33568888888999999987643
Q ss_pred ee---eCCCCceEEEEEc-CC-CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 371 KV---NGGKNAPYVWVQF-PG-SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 371 ~~---~~~~~~~~~~~~~-~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
.. ..+ .|.++.+.+ +. ....++.+.|+++ ||.+.+. +.+++|++. ..+++++++++++|++++
T Consensus 330 ~~~~~~~g-~g~~~~i~~~~~~~~~~~~~~~L~~~-GV~v~~~------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 330 NIVREVRG-RGLMLAVELEPEAGGARQYCEALKER-GLLAKDT------HDHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred CceEEEec-cceEEEEEEecCchhHHHHHHHHHHC-CeEEecC------CCCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 21 222 355544444 32 2455677777765 9999752 246899995 568999999999998864
No 191
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.90 E-value=9.8e-22 Score=193.59 Aligned_cols=337 Identities=11% Similarity=0.075 Sum_probs=199.5
Q ss_pred CCCeEEeCCCCCCCC---CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQP---IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~---~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..|..... .+|.+.+++.+.+........ .+ ......++++.++++ .+ .+.+++++++++|
T Consensus 30 g~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~--~~-~~~~~~~~~~~l~~~----~~--~~~~~~~~SGs~A 100 (400)
T PTZ00125 30 GKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSR--AF-YNDVLGLAEKYITDL----FG--YDKVLPMNSGAEA 100 (400)
T ss_pred CCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccc--cc-cCHHHHHHHHHHHhC----CC--CCEEEEeCCcHHH
Confidence 467888877643322 578899999998875431111 11 122334445555443 23 3578888888888
Q ss_pred HHH-HHHhc----------CCCCEEEEeCCCchhhHhHHHHhcccc-ccccccCccceeEEeecCCCCCccCCCCCCCCc
Q 013521 148 ISR-LQMLL----------GSNVTVAVQDPSFPAYIDTSVIVGQAG-KFLKETGKYRNIVYMNCRPENNFFPDLSTTSRT 215 (441)
Q Consensus 148 l~~-l~~l~----------~~gd~Vlv~~p~y~~~~~~~~~~g~~~-~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~ 215 (441)
... +.... ..++.|++.+-+|++............ ...........+..++..+-+.+...+. .+++
T Consensus 101 ~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~-~~~~ 179 (400)
T PTZ00125 101 GETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQ-DPNV 179 (400)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhC-CCCe
Confidence 876 43321 135788888888888643332222110 0000000000122332211111111111 2578
Q ss_pred cEEEEcCCCCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcc-c
Q 013521 216 DIIFFCSPNNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTG-V 293 (441)
Q Consensus 216 ~~v~i~~p~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G-~ 293 (441)
++|++..++||||.+++ .+.+++|.++|++||+++|+||+|..+...+.+.........+| +.++||.++ +| +
T Consensus 180 ~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd----~~~~sK~l~-~g~~ 254 (400)
T PTZ00125 180 AAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPD----IVLLGKALS-GGLY 254 (400)
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCC----EEEEccccc-CCCc
Confidence 88888777999999986 55699999999999999999999987655443211111111233 234789998 56 5
Q ss_pred eeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC----C
Q 013521 294 RLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL----G 369 (441)
Q Consensus 294 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g 369 (441)
|+||++++++++ +.+.........+.+++.+.++.+.++.... ....++.+++.+.+.+.|++. +
T Consensus 255 ~ig~v~~~~~~~--------~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~---~~~~~~~~~~~~~l~~~l~~l~~~~~ 323 (400)
T PTZ00125 255 PISAVLANDDVM--------LVIKPGEHGSTYGGNPLACAVAVEALEVLKE---EKLAENAQRLGEVFRDGLKELLKKSP 323 (400)
T ss_pred CcEEEEEcHHHH--------hhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999998874 3333222223345678888888776642111 122334444555555555442 3
Q ss_pred C-eeeCCCCceEEEEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 370 L-KVNGGKNAPYVWVQFPG---SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 370 ~-~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
+ .... ..|.++|+.++. ....++...+++ +||.+.|+ +.++|||+. ..+++++++++++|.+++
T Consensus 324 ~~~~~~-~~g~~~~v~~~~~~~~~~~~~~~~l~~-~Gv~v~~~------~~~~lRi~~~~~~~~~~i~~~l~~l~~~l 393 (400)
T PTZ00125 324 WVKEIR-GKGLLNAIVFDHSDGVNAWDLCLKLKE-NGLLAKPT------HDNIIRFAPPLVITKEQLDQALEIIKKVL 393 (400)
T ss_pred CeEEEe-cccEEEEEEEccCcchHHHHHHHHHHH-CCeEEeec------CCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 2 2223 367888888863 234566677665 59999885 257899994 568999999999998753
No 192
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=2.4e-21 Score=189.06 Aligned_cols=212 Identities=17% Similarity=0.160 Sum_probs=147.9
Q ss_pred cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHH----HHhcccccccccc
Q 013521 114 QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTS----VIVGQAGKFLKET 188 (441)
Q Consensus 114 ~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~ 188 (441)
+-...|++.+|++. +. ++++++++| ++++.+ +..++++||.|+++.|+|++....+ ...|
T Consensus 60 p~~~~Le~~lA~l~----g~-~~~v~~~sG-~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g--------- 124 (405)
T PRK08776 60 PTRDLLGEALAELE----GG-AGGVITATG-MGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGH--------- 124 (405)
T ss_pred hHHHHHHHHHHHHh----CC-CceEEEcCH-HHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcC---------
Confidence 34577888888875 43 456665555 789987 6778899999999999998844333 3334
Q ss_pred CccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcc
Q 013521 189 GKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSI 268 (441)
Q Consensus 189 ~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~ 268 (441)
.+++.++..+.+.+...+ .+++++|++++|+||||.+.+ +++|+++|+++|++||+|++|..... ..++
T Consensus 125 ---~~v~~v~~~d~~~l~~~i--~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~---~~pl 193 (405)
T PRK08776 125 ---FALITADLTDPRSLADAL--AQSPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL---QKPL 193 (405)
T ss_pred ---cEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc---CCcc
Confidence 366666653211111111 257899999999999999977 88999999999999999999974221 1222
Q ss_pred cccCCCcceeEEEecCCcccCCc-cceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHH
Q 013521 269 YEIPGAREVAIEISSFSKFAGFT-GVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQAL 347 (441)
Q Consensus 269 ~~~~~~~~~~i~i~S~SK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 347 (441)
.+ +..+++.|.+|.++.+ ++..|+++++++.+ .+++...........+++.+.++. .+.+++
T Consensus 194 -~~----gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l-------~~~l~~~~~~~g~~~s~~~a~l~~-----~gl~tl 256 (405)
T PRK08776 194 -EF----GADLVLHSTTKYINGHSDVVGGAVVARDAEL-------HQQLVWWANALGLTGSPFDAFLTL-----RGLRTL 256 (405)
T ss_pred -cc----cCCEEEecCceeecCCCCceEEEEEeCCHHH-------HHHHHHHHHhcCCCCCHHHHHHHH-----hhhCcH
Confidence 12 1238899999999755 57789998865443 455554444444445666654433 344567
Q ss_pred HHHHHHHHHHHHHHHHHHHhC
Q 013521 348 RTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 348 ~~~~~~~~~~~~~l~~~L~~~ 368 (441)
+.+.++.+++...+.+.|+++
T Consensus 257 ~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 257 DARLRVHQENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 888899999999999999987
No 193
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.89 E-value=6.4e-21 Score=185.07 Aligned_cols=246 Identities=18% Similarity=0.203 Sum_probs=167.7
Q ss_pred CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHH----Hhcccccccc
Q 013521 112 AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSV----IVGQAGKFLK 186 (441)
Q Consensus 112 ~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~ 186 (441)
..+-..+|++.+|++. +. +..++++++++|+.. +..++++||+|+++.+.|.+....+. ..|
T Consensus 38 ~~p~~~~le~~la~l~----g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g------- 104 (369)
T cd00614 38 GNPTVDALEKKLAALE----GG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLG------- 104 (369)
T ss_pred CChhHHHHHHHHHHHH----CC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcC-------
Confidence 4556788999999985 43 456677777889887 67788999999999999988665443 344
Q ss_pred ccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC
Q 013521 187 ETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR 266 (441)
Q Consensus 187 ~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~ 266 (441)
.++..++.++.+.+...+ .+++++|++.+|+||||.+.+ +++|+++|++||+++|+|++|+..... .
T Consensus 105 -----~~~~~v~~~d~~~l~~~i--~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~---~ 171 (369)
T cd00614 105 -----IEVTFVDPDDPEALEAAI--KPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ---R 171 (369)
T ss_pred -----eEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC---C
Confidence 477777664211111111 257899999999999999998 889999999999999999999854321 1
Q ss_pred cccccCCCcceeEEEecCCcccCCcc-ceeEEEEeec-cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH
Q 013521 267 SIYEIPGAREVAIEISSFSKFAGFTG-VRLGWTVVPE-ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF 344 (441)
Q Consensus 267 ~~~~~~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 344 (441)
++ .. +.++++.|+||.++.+| ++.||+++++ ++ .+.+...........+++...++...++
T Consensus 172 ~~-~~----g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l--------~~~l~~~~~~~g~~~~p~~a~~~l~~l~---- 234 (369)
T cd00614 172 PL-EL----GADIVVHSATKYIGGHSDVIAGVVVGSGEAL--------IQRLRFLRLALGTILSPFDAWLLLRGLK---- 234 (369)
T ss_pred hh-hh----CCcEEEeccceeccCCCCceEEEEEeCcHHH--------HHHHHHHHHhhCCCCCHHHHHHHHcCCC----
Confidence 11 11 23489999999998555 7899999987 54 4555544444444566666554444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCe-eeCC----------------CCceEEEEEcCCCChHHHHHHHHHhcCe
Q 013521 345 QALRTVIDYYKENAKIIVDAFQSL-GLK-VNGG----------------KNAPYVWVQFPGSSSWDVFAEILEKTHI 403 (441)
Q Consensus 345 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~ll~~~gi 403 (441)
.+..+.++..++.+.+.+.|+++ ++. +.-| ..|..+.+.+++ +.+.+..+++.-.+
T Consensus 235 -tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~--~~~~~~~f~~~l~~ 308 (369)
T cd00614 235 -TLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG--GLEAAKKFLNALKL 308 (369)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC--CHHHHHHHHHcCCc
Confidence 23556677888999999999987 342 2111 236678888863 23334455554344
No 194
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.89 E-value=7.9e-21 Score=189.90 Aligned_cols=353 Identities=15% Similarity=0.120 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC---CCcCcHHHHHHHHHHHhhhCC
Q 013521 56 PEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYG---AEQGNMALRTAIADKFYKDMG 132 (441)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~---~~~g~~~lr~~ia~~l~~~~~ 132 (441)
.++.+.......+.......-++.|.++...|+.+.+++.+.-.- ..++.|+ ..+|..++++++++++.+.+|
T Consensus 52 ~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~----~~~tpYq~e~~sqG~lel~~~~~~~la~l~G 127 (481)
T PRK04366 52 LEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGF----AELHPLQPEETVQGALELMYELQEWLKEITG 127 (481)
T ss_pred HHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcch----hcCCCCCChhhhhHHHHHHHHHHHHHHHHhC
Confidence 334444444444443212234778888888888888888874211 3455674 456899999999999988777
Q ss_pred CCCCcEEEcCCcHHHHHHH--H--HhcCCCC----EEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCC
Q 013521 133 IEGDEIFISDGAQSDISRL--Q--MLLGSNV----TVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENN 204 (441)
Q Consensus 133 ~~~~~I~~t~G~~~al~~l--~--~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~ 204 (441)
.+...+..++|+++.+..+ . .+.++|| +|+++.|+|+.+...+...| .+++.++.+.++.
T Consensus 128 ~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G------------~~vv~v~~~~~~~ 195 (481)
T PRK04366 128 MDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAG------------FKVVEIPSNEDGL 195 (481)
T ss_pred CCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcC------------CEEEEeecCCCCC
Confidence 7755666677777665532 2 3357776 99999999999999888888 5888998864332
Q ss_pred ccCC-CCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEE
Q 013521 205 FFPD-LST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEI 281 (441)
Q Consensus 205 ~~~~-~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i 281 (441)
.+.+ ++. .+++++|++++|+ |||.. ..++++|+++|+++|+++++|.++..-.... .+... .+..+++
T Consensus 196 ~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~--~~~~~----~GaD~~~ 266 (481)
T PRK04366 196 VDLEALKAAVGEDTAALMLTNPN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGK--ARPGD----MGFDVVH 266 (481)
T ss_pred cCHHHHHhhcccCCeEEEEeCCC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhccc--CCccc----cCCCEEE
Confidence 2221 221 3578999999998 99964 3469999999999999999999985211111 11111 2345999
Q ss_pred ecCCcccCCc----cceeEEEEeeccccccCCchhH-------------H-HHHHHHhhhcCCCcHHHHHHHHHhcCCCc
Q 013521 282 SSFSKFAGFT----GVRLGWTVVPEELRYSNGYPVI-------------K-DFNRIVCTCFNGASNIVQAGGLACLSPDG 343 (441)
Q Consensus 282 ~S~SK~~~~~----G~r~G~l~~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 343 (441)
+|.+|+++.| |..+|++.++++++...-..+. . .+++.+. .+.+.....++...+...+
T Consensus 267 ~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a---~t~~~l~~~~a~~~l~~~G 343 (481)
T PRK04366 267 LNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRA---FYGNFGVLVRAYAYIRSLG 343 (481)
T ss_pred EechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCccc---ccCchHHHHHHHHHHHHHH
Confidence 9999998744 4568898887765421100000 0 0001111 1122233344445554445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE--EEEEc-----CCCChHHHHHHHHHhcCeEEeCCCCcCCCCC
Q 013521 344 FQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY--VWVQF-----PGSSSWDVFAEILEKTHILTIPGSGFGPGGN 416 (441)
Q Consensus 344 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 416 (441)
.+.+++..++...+.+++.+.|+++ +.+... +..+ +.+.. ++.+..++.++|.++ ||.+. +..|.....
T Consensus 344 ~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~-Gi~~~-~~~~p~~~~ 419 (481)
T PRK04366 344 AEGLREVSEDAVLNANYLKARLKDI-YDLPYD-RPCMHEFVLSGKKLKETGVRTLDIAKRLLDY-GFHPP-TIYFPLIVP 419 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhh-CcccCC-CCeeEEEEEECccccccCCCHHHHHHHHHHC-CccCC-ccccccccC
Confidence 5566777777788899999999886 332211 1111 33332 234566777777654 98865 222211225
Q ss_pred CeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 417 EHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 417 ~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
+.+|+++ .+++++++++++.|+++
T Consensus 420 ~~l~is~~e~~t~edid~l~~~l~~i 445 (481)
T PRK04366 420 EALMIEPTETESKETLDAFIAAMKQI 445 (481)
T ss_pred CeEEEcccCCCCHHHHHHHHHHHHHH
Confidence 6899997 55899999999999765
No 195
>PLN00144 acetylornithine transaminase
Probab=99.89 E-value=9e-21 Score=184.39 Aligned_cols=332 Identities=14% Similarity=0.170 Sum_probs=201.2
Q ss_pred CCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..|.. .+ ..+|.+.+++.+.+.+... ...+ ...+....+|+.+.+.. ..+.+++++++++|
T Consensus 14 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~---~~~~----~~~~~~~~la~~l~~~~--~~~~v~f~~sGseA 84 (382)
T PLN00144 14 GKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAH---VSNV----YHTIPQVELAKRLVASS--FADRVFFCNSGTEA 84 (382)
T ss_pred CCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCC---cccc----ccCHHHHHHHHHHHhcC--CCCeEEEeCCcHHH
Confidence 456788766631 22 3578999999998875421 1111 11233445555554322 24699999999999
Q ss_pred HHH-HH--H-hcC------C------CCEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCCCccCCCC
Q 013521 148 ISR-LQ--M-LLG------S------NVTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPENNFFPDLS 210 (441)
Q Consensus 148 l~~-l~--~-l~~------~------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~~~~~~~~ 210 (441)
... +. . ... + ..+|+....+|++....+........+.. .......+..++..+-+.+. ...
T Consensus 85 ~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~-~~~ 163 (382)
T PLN00144 85 NEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAAR-KLI 163 (382)
T ss_pred HHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHH-Hhc
Confidence 885 42 1 111 1 25789999999997544443322110000 00000123333332111111 111
Q ss_pred CCCCccEEEEcCC-CCccccCCC--HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCc--ccccCCCcceeEEEecCC
Q 013521 211 TTSRTDIIFFCSP-NNPTGHAAT--WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRS--IYEIPGAREVAIEISSFS 285 (441)
Q Consensus 211 ~~~~~~~v~i~~p-~NPtG~~~~--~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~--~~~~~~~~~~~i~i~S~S 285 (441)
...++++|++ .| +|| |.+++ .+.+++|.++|++||+++|+||+|..|...+.+.+ ...+ .+| +.|||
T Consensus 164 ~~~~~aavi~-eP~q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~--~PD----i~t~s 235 (382)
T PLN00144 164 QKGKTAAVFV-EPVQGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV--EPD----IMTLA 235 (382)
T ss_pred CCCCeEEEEE-ccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCC--CCC----EEEec
Confidence 1245667665 55 899 55554 44599999999999999999999998766553322 2233 345 78899
Q ss_pred cccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhc---CCCcH-HHHHHHHHHHHHHHHHH
Q 013521 286 KFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACL---SPDGF-QALRTVIDYYKENAKII 361 (441)
Q Consensus 286 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l---~~~~~-~~~~~~~~~~~~~~~~l 361 (441)
|.++ +|+|+||+++++++. +.+.........+.+++++.++.+.+ ++... ++++++.+.+ ++.+
T Consensus 236 K~l~-~G~pig~v~~~~~~~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l---~~~l 303 (382)
T PLN00144 236 KPLA-GGLPIGAVLVTEKVA--------SAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYL---RELL 303 (382)
T ss_pred cccc-CCcceEEEEEcHHHH--------hccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHH---HHHH
Confidence 9998 999999999998874 33322223334557888888888444 43333 3444444444 3344
Q ss_pred HHHHHhCC-C-eeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee--cCHHHHHHHHHHH
Q 013521 362 VDAFQSLG-L-KVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF--GHREYISEACRRL 437 (441)
Q Consensus 362 ~~~L~~~g-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~~~~~~l~~l 437 (441)
.+.+.+++ + .+.. .|+++|+++. .....+...+++ +||.+.|+. ..+.||++.. .+++++++++++|
T Consensus 304 ~~~~~~~~~~~~vrg--~G~~~~l~l~-~~~~~~~~~~~~-~Gv~i~~~~-----~~~~lrl~p~~~~~~~~i~~~~~~l 374 (382)
T PLN00144 304 RRKLGGNPHVKEVRG--VGLLVGIQLD-VPAGPLVDACRD-SGLLVLTAG-----KGDVVRLVPPLVISEAELEQAVEIL 374 (382)
T ss_pred HHHHhhCCCceeeec--CceEEEEEec-CccHHHHHHHHH-CCeEEeecC-----CCCEEEEeCCCccCHHHHHHHHHHH
Confidence 44455542 2 2222 7899999994 234566666665 599999862 1478999963 4789999999999
Q ss_pred HhhC
Q 013521 438 KNFL 441 (441)
Q Consensus 438 ~~~l 441 (441)
.+++
T Consensus 375 ~~~l 378 (382)
T PLN00144 375 ADCL 378 (382)
T ss_pred HHHH
Confidence 8864
No 196
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.4e-20 Score=182.12 Aligned_cols=219 Identities=15% Similarity=0.209 Sum_probs=154.1
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHh-cccccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIV-GQAGKF 184 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~ 184 (441)
+.+| +.+....|++++|++. + .+++++|+|+++++.+ +..++++||.|+++.|+|++....+... ...|
T Consensus 47 Y~R~-~npt~~~Le~~lA~le----g--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g-- 117 (388)
T PRK08861 47 YTRS-GNPNRGLLEQTLSELE----S--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD-- 117 (388)
T ss_pred ccCC-CCchHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC--
Confidence 4455 3456889999999986 4 5899999999999998 6778899999999999998755544322 1111
Q ss_pred ccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC
Q 013521 185 LKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD 262 (441)
Q Consensus 185 ~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~ 262 (441)
.+++.++..+. .+++. .+++++|++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 118 -------i~v~~vd~~d~----e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~ 183 (388)
T PRK08861 118 -------FKVQFVDQSDA----AALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ 183 (388)
T ss_pred -------eEEEEECCCCH----HHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC
Confidence 36666643211 11211 358999999999999999999 678888999999999999999854332
Q ss_pred CCCCcccccCCCcceeEEEecCCcccCCc-cceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCC
Q 013521 263 PSPRSIYEIPGAREVAIEISSFSKFAGFT-GVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSP 341 (441)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~i~S~SK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 341 (441)
. |. .+ +-.+++.|++|.++-+ ++..|+++++++.+ .+++...+.......+++....+.
T Consensus 184 ~-pl---~~----GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~-------~~~~~~~~~~~G~~~~p~~a~l~~----- 243 (388)
T PRK08861 184 K-PL---EL----GADFVIHSTTKYINGHSDVIGGVLITKTKEH-------AEELAWWGNCIGATGTPFDSYMTL----- 243 (388)
T ss_pred C-Cc---cc----CCCEEEeecceeccCCCcceeEEEEecHHHH-------HHHHHHHHhccCCCCChHHHHHHH-----
Confidence 1 22 12 2238999999998743 46789998865432 344554455445555666533222
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 342 DGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
.+.+.+.-+.++..++...+.+.|+.+
T Consensus 244 rgl~Tl~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 244 RGIRTLGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 344445667788888899999999987
No 197
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=7.1e-21 Score=185.83 Aligned_cols=217 Identities=15% Similarity=0.160 Sum_probs=148.0
Q ss_pred CCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHH----hcccc
Q 013521 108 KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVI----VGQAG 182 (441)
Q Consensus 108 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~ 182 (441)
..| +.+-..+|++.+|++. |.++. +++++++.++.. +..++++||+|+++.|.|+++...+.. .|
T Consensus 60 ~r~-~~p~~~~Le~~lA~l~----G~~~~--~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G--- 129 (398)
T PRK07504 60 SRY-SNPTVDMFEKRMCALE----GAEDA--RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYG--- 129 (398)
T ss_pred ecC-CCchHHHHHHHHHHHh----CCCee--eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC---
Confidence 345 3446789999999986 65543 345566677765 667889999999999999986555432 34
Q ss_pred ccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccc
Q 013521 183 KFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI 260 (441)
Q Consensus 183 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~ 260 (441)
++++.++..+ ..++++ .+++|+|++++|+||||.+++ +++|.++|+++|+++|+|++|....
T Consensus 130 ---------~~v~~vd~~d----~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~ 193 (398)
T PRK07504 130 ---------IESTLVDGLD----LDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPL 193 (398)
T ss_pred ---------eEEEEECCCC----HHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccc
Confidence 4666664211 111221 368999999999999999999 8888999999999999999998543
Q ss_pred cCCCCCcccccCCCcceeEEEecCCcccCCccceeE-EEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhc
Q 013521 261 TDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLG-WTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACL 339 (441)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 339 (441)
... + + .. +.++++.|+||.++.+|.|+| +++++++.+ .+.+...........+++....+...
T Consensus 194 ~~~-~--~-~~----gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i-------~~~~~~~~~~~g~~~s~~~A~~~l~~- 257 (398)
T PRK07504 194 FQK-P--L-EL----GAHIVVYSATKHIDGQGRCLGGVVLSDKAWI-------EEHLQDYFRHTGPSLSPFNAWTLLKG- 257 (398)
T ss_pred cCC-c--h-hh----CCCEEEeeccccccCCccceEEEEEeCcHHH-------HHHHHHHHHHhCCCCCHHHHHHHHhc-
Confidence 321 1 1 22 234899999999988999996 566666553 22233333333444555554433333
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 013521 340 SPDGFQALRTVIDYYKENAKIIVDAFQSL-GL 370 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 370 (441)
.+.+..+.++.+++.+.+.+.|+++ ++
T Consensus 258 ----L~tl~~R~~~~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 258 ----LETLPVRVRQQTESAAAIADFLAGHPKV 285 (398)
T ss_pred ----cchHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 3345666777778899999999886 44
No 198
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.88 E-value=2e-20 Score=181.91 Aligned_cols=216 Identities=20% Similarity=0.267 Sum_probs=150.8
Q ss_pred CCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHh----HHHHhcccc
Q 013521 108 KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYID----TSVIVGQAG 182 (441)
Q Consensus 108 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~ 182 (441)
.+|+ .+-..++++.+|++. +. +++++++++++++.+ +..++++||+|+++.+.|.+... .+...|
T Consensus 49 ~r~~-~p~~~~le~~la~l~----g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g--- 118 (380)
T TIGR01325 49 SRYA-NPTVAAFEERIAALE----GA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFG--- 118 (380)
T ss_pred ecCC-CchHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhC---
Confidence 3453 445788999999985 44 577889999999987 67788999999999998866433 344455
Q ss_pred ccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC
Q 013521 183 KFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD 262 (441)
Q Consensus 183 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~ 262 (441)
.+++.++.++...+...+ .+++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|..+...
T Consensus 119 ---------~~v~~v~~~d~~~l~~~i--~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~ 184 (380)
T TIGR01325 119 ---------IEVSFVDPTDLNAWEAAV--KPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQ 184 (380)
T ss_pred ---------CEEEEECCCCHHHHHHhc--CCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 477777764211111111 357899999999999999998 889999999999999999999854332
Q ss_pred CCCCcccccCCCcceeEEEecCCcccCCcccee-EEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCC
Q 013521 263 PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRL-GWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSP 341 (441)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 341 (441)
. | + .. +..+++.|+||.++.+|.++ |++++++++ .+.+...........++.... .++.
T Consensus 185 ~-p--l-~~----g~Divv~S~sK~l~g~g~~~gG~vv~~~~~--------~~~l~~~~~~~g~~~~p~~a~---~~l~- 244 (380)
T TIGR01325 185 Q-P--L-KL----GADVVVYSATKHIDGQGRVMGGVIAGSEEL--------MAEVAVYLRHTGPAMSPFNAW---VLLK- 244 (380)
T ss_pred C-c--h-hh----CCCEEEeeccceecCCCCeEEEEEEeCHHH--------HHHHHHHHHhhCCCCCHHHHH---HHHh-
Confidence 1 2 2 12 22488889999998778776 778777765 344554443333334444432 2332
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 342 DGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
+.+.+..+.++..++++.+.+.|+++
T Consensus 245 -~l~tl~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 245 -GLETLSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred -ccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 23344666778888899999999987
No 199
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=1.2e-20 Score=183.80 Aligned_cols=213 Identities=16% Similarity=0.185 Sum_probs=148.8
Q ss_pred CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHH----Hhcccccccc
Q 013521 112 AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSV----IVGQAGKFLK 186 (441)
Q Consensus 112 ~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~ 186 (441)
+.+-..++++.+|++. |. +..++++++++|+.+ +..++++||+|+++.|+|++....+. ..|
T Consensus 62 ~~p~~~~le~~lA~l~----g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~G------- 128 (398)
T PRK08249 62 TNPTVQAFEEKVRILE----GA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMG------- 128 (398)
T ss_pred CChHHHHHHHHHHHHh----CC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCC-------
Confidence 3456788999999986 43 445666666788887 67788999999999999998654443 344
Q ss_pred ccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC
Q 013521 187 ETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR 266 (441)
Q Consensus 187 ~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~ 266 (441)
++++.++..+.+.+...+ .+++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+....
T Consensus 129 -----i~v~~vd~~d~e~l~~~i--~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~--- 195 (398)
T PRK08249 129 -----VDVTLCETGDHEQIEAEI--AKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN--- 195 (398)
T ss_pred -----eEEEEcCCCCHHHHHHhc--CCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC---
Confidence 466666542111111111 357899999999999999999 7789999999999999999998543321
Q ss_pred cccccCCCcceeEEEecCCcccCCcccee-EEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHH
Q 013521 267 SIYEIPGAREVAIEISSFSKFAGFTGVRL-GWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQ 345 (441)
Q Consensus 267 ~~~~~~~~~~~~i~i~S~SK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 345 (441)
++ .. +..+++.|+||.++.+|.++ ||+++++++ .+.+...+.......+++.+..+.+-+ +
T Consensus 196 ~l-~~----~~Divv~S~sK~l~g~~~~~gG~vv~~~~l--------~~~l~~~~~~~g~~~s~~~a~l~l~~l-----~ 257 (398)
T PRK08249 196 PL-AL----GADLVIHSATKFLSGHADALGGVVCGSKEL--------MEQVYHYREINGATMDPMSAYLILRGM-----K 257 (398)
T ss_pred ch-hh----CCCEEeccCceecCCCCCceEEEEECCHHH--------HHHHHHHHHhcCCCCCHHHHHHHHhCc-----c
Confidence 12 11 12378899999998667776 677666655 455555555455556666655444333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Q 013521 346 ALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 346 ~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
.+..+.++.+++++.+.+.|+++
T Consensus 258 tL~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 258 TLKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcC
Confidence 34566677788899999999986
No 200
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.88 E-value=1.2e-20 Score=183.49 Aligned_cols=323 Identities=15% Similarity=0.144 Sum_probs=193.0
Q ss_pred CCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCC-----CCCCCC----CCCcCcHHHHHHHHHHHhhhCCCCCCcEEEc
Q 013521 72 ARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTV-----KGYKGY----GAEQGNMALRTAIADKFYKDMGIEGDEIFIS 141 (441)
Q Consensus 72 ~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~-----~~~~~Y----~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t 141 (441)
.++++|+.+++ ++..++.+.+++.+++..+... .+..+. +...-..++++.+|+++ +.+ +.++++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~----~~~-~~l~~~ 78 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH----GAP-EAFIVP 78 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh----CCC-eEEEEC
Confidence 35899999995 6778888888888888776310 111111 12345677888888886 553 458889
Q ss_pred CCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC----CCCccE
Q 013521 142 DGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST----TSRTDI 217 (441)
Q Consensus 142 ~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~----~~~~~~ 217 (441)
+|++..+.++..+.++||.|++..-.|.+....++.... ..+.++..+-+.+...+.. .+++.+
T Consensus 79 sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 146 (370)
T PRK05937 79 SGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISG------------WHQSFRHNDLDHLESLLESCRQRSFGRIF 146 (370)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCC------------ceEEecCCCHHHHHHHHHhhhccCCCcEE
Confidence 988766655555567889988888888888777766531 1222222111111111111 123556
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
|++++++|+||.+.| +++|.++|+++|+++++||+|+...............+..+..+.+.||||.+|..| .|
T Consensus 147 v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--~~- 220 (370)
T PRK05937 147 IFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--AA- 220 (370)
T ss_pred EEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc--eE-
Confidence 677899999999999 889999999999999999999853333211111111112233366899999998667 33
Q ss_pred EEeeccccccCCchhHHHHHHH-Hhhhc-CCCcHHHHHHHHHhc---CCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 013521 298 TVVPEELRYSNGYPVIKDFNRI-VCTCF-NGASNIVQAGGLACL---SPDGFQALRTVIDYYKENAKIIVDAFQSLGLKV 372 (441)
Q Consensus 298 l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~a~~~~l---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 372 (441)
++..++.. ..+... ....+ .+.+++...++.+++ .+.+ +..++++++.++++.+.|+..+
T Consensus 221 vl~~~~~~--------~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~----~~~~~~l~~l~~~l~~~l~~~~--- 285 (370)
T PRK05937 221 LLSSSEVK--------QDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG----ELARKQLFRLKEYFAQKFSSAA--- 285 (370)
T ss_pred EEcCHHHH--------HHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHhcCCCC---
Confidence 33434331 222211 11111 123444444333333 2222 3345677777777777765421
Q ss_pred eCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 373 NGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
.+....+.+++....++... |+++||.+.... ....++||+++ .++++|++++++.|+++
T Consensus 286 ----~~~~~~i~~~~~~~~~~~~~-L~~~gi~v~~~~---~~~~~~iRis~~~~~t~edid~l~~~L~~~ 347 (370)
T PRK05937 286 ----PGCVQPIFLPGISEQELYSK-LVETGIRVGVVC---FPTGPFLRVNLHAFNTEDEVDILVSVLATY 347 (370)
T ss_pred ----CCCEEEEEeCChhHHHHHHH-HHHCCeeEEeeC---CCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 11122244454344445455 455699886422 22346899997 46899999999999875
No 201
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=1.9e-20 Score=182.38 Aligned_cols=218 Identities=17% Similarity=0.177 Sum_probs=150.2
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH----HHHhccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT----SVIVGQA 181 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~ 181 (441)
+.+| +++...+|++.+|++. + .+++++++|+++|+.+ +..++++||+|+++.|+|.++... +...|
T Consensus 59 Y~r~-~~pt~~~Le~~lA~l~----g--~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~G-- 129 (394)
T PRK07050 59 YGLH-ATPTSLALAQRLAEIE----G--GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFG-- 129 (394)
T ss_pred cCCC-CCHHHHHHHHHHHHHh----C--CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcC--
Confidence 4455 4456688888888875 4 4699999999999997 677899999999999999987653 34445
Q ss_pred cccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccccc
Q 013521 182 GKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYIT 261 (441)
Q Consensus 182 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~ 261 (441)
++++.++..+...+.. . ..+++|+|++++|+||+|. ..++++|+++|+++|+++|+|++|.....
T Consensus 130 ----------i~v~~vd~~~~~~l~~-~-i~~~tklV~le~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~~~ 194 (394)
T PRK07050 130 ----------ITVRFYDPLIGAGIAD-L-IQPNTRLIWLEAPGSVTME---VPDVPAITAAARARGVVTAIDNTYSAGLA 194 (394)
T ss_pred ----------eEEEEECCCCHHHHHH-h-cCCCCeEEEEECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCcccccc
Confidence 4777776432211111 1 1368999999999999974 55699999999999999999999974221
Q ss_pred CCCCCcccccCCCcceeEEEecCCcccCC-ccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC
Q 013521 262 DPSPRSIYEIPGAREVAIEISSFSKFAGF-TGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLS 340 (441)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~i~S~SK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 340 (441)
...+. .+.++++.|+||.++. .+.+.|++++.++.+ .+++...+.....+.+++....+..-
T Consensus 195 ------~~~l~--~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~-------~~~~~~~~~~~G~~~~~~~a~l~lr~-- 257 (394)
T PRK07050 195 ------FKPFE--HGVDISVQALTKYQSGGSDVLMGATITADAEL-------HAKLKLARMRLGIGVSADDCSLVLRG-- 257 (394)
T ss_pred ------cCHHH--cCCeEEEEECCceecCCCCeeEEEEEECCHHH-------HHHHHHHHHhcCCCCCHHHHHHHHcC--
Confidence 11111 1235899999999961 334589888755433 45555555544555666554333322
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 341 PDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
.+.+..+.++..++...+.+.|+++
T Consensus 258 ---l~tl~~Rl~~~~~~a~~la~~L~~~ 282 (394)
T PRK07050 258 ---LPSLQVRLAAHDRSALEVAEWLKAR 282 (394)
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 2334556677777778888888876
No 202
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.88 E-value=2.2e-20 Score=182.11 Aligned_cols=323 Identities=19% Similarity=0.211 Sum_probs=211.8
Q ss_pred CCcHHHHHHHHHHHhhccCCC--CCCCCCC--CcCcHHHHHHHHHHHhhhCCCCC-CcEEEcCCcHHHHHH-HHHh---c
Q 013521 85 PIPDIITSAMAEHAFALSTVK--GYKGYGA--EQGNMALRTAIADKFYKDMGIEG-DEIFISDGAQSDISR-LQML---L 155 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~--~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~-~~I~~t~G~~~al~~-l~~l---~ 155 (441)
+.|+.+.+++.+.+......+ +..++.. ..-..+.|+.+++++ ++++ ++|++++|++.+++. +..+ +
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l----g~~~~~~v~~~~~~t~a~~~~~~~l~~~~ 85 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL----GAPPDEEVVFTSNGTEALNAVASSLLNPL 85 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH----TSSTTEEEEEESSHHHHHHHHHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc----CCccccccccccccchhhhhhhhcccccc
Confidence 678999999999987654322 1222211 223356677777776 8888 899999999999998 5666 6
Q ss_pred CCCCEEEEeCCCchhhHhHHHHhc-cccccccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCccccCC
Q 013521 156 GSNVTVAVQDPSFPAYIDTSVIVG-QAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPTGHAA 231 (441)
Q Consensus 156 ~~gd~Vlv~~p~y~~~~~~~~~~g-~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPtG~~~ 231 (441)
++||+|++..-.|++....+.... +.| .++..++.+.++..+++ +++ .++++++.+++.+|-||..+
T Consensus 86 ~~g~~vl~~~~~~~s~~~~~~~~~~~~g---------~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~ 156 (371)
T PF00266_consen 86 KPGDEVLVTSNEHPSNRYPWEEIAKRKG---------AEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRN 156 (371)
T ss_dssp TTTCEEEEEESSHHHHHHHHHHHHHHTT---------EEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBS
T ss_pred ccccccccccccccccccccccccccch---------hhhccccccccchhhhhhhhhhhccccceEEeecccccccEEe
Confidence 999999999999999774444332 112 58888888765433321 111 38999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccC---
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN--- 308 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~--- 308 (441)
| +++|.++|+++|+++++|.+++-... +..+.. .+.++++.|..|.+|.+ .+|+++++++.+...
T Consensus 157 p---i~~I~~~~~~~~~~~~vD~~~~~g~~---~id~~~----~~~D~~~~s~~Kl~gp~--G~g~l~v~~~~~~~~~p~ 224 (371)
T PF00266_consen 157 P---IEEIAKLAHEYGALLVVDAAQSAGCV---PIDLDE----LGADFLVFSSHKLGGPP--GLGFLYVRPEAIERLRPA 224 (371)
T ss_dssp S---HHHHHHHHHHTTSEEEEE-TTTTTTS---S--TTT----TTESEEEEESTSTTSSS--TEEEEEEEHHHHHHHHTS
T ss_pred e---eceehhhhhccCCceeEechhccccc---cccccc----cccceeeecccccCCCC--chhhheehhhhhhccccc
Confidence 9 88999999999999999999883221 222222 24458999999955444 489999998764210
Q ss_pred --CchhHHH--HHHH--Hh----hhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC--
Q 013521 309 --GYPVIKD--FNRI--VC----TCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGG-- 375 (441)
Q Consensus 309 --~~~~~~~--~~~~--~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-- 375 (441)
....... .... .. ....+.+.+...+...+++......+++.+++..+..+++.+.|+++ ++.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 304 (371)
T PF00266_consen 225 KPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDD 304 (371)
T ss_dssp SSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSC
T ss_pred cccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecc
Confidence 0000000 0100 00 01113444444444444432212346778888889999999999988 5566432
Q ss_pred --CCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCC------CCCCeEEEEe--ecCHHHHHHH
Q 013521 376 --KNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGP------GGNEHIRVSA--FGHREYISEA 433 (441)
Q Consensus 376 --~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~~iRls~--~~~~~~~~~~ 433 (441)
..+..+.+.+++.+..++.+.|.++ ||.+..|..+.. ...+.||+|+ +++.+|++++
T Consensus 305 ~~~~~~i~~~~~~~~~~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 305 EPRRPSIVSFNLPGSDADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp GGBGTTEEEEEETTSSHHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred cccccceEEEeecCCCHHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 2355677888877777777776666 999999876540 1238999996 5689998864
No 203
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=3.9e-20 Score=180.19 Aligned_cols=217 Identities=17% Similarity=0.167 Sum_probs=145.5
Q ss_pred CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHH-hccccccccccC
Q 013521 112 AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVI-VGQAGKFLKETG 189 (441)
Q Consensus 112 ~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~ 189 (441)
+.+...+|++++|++. +.+ ..+++++ +++|+.+ +..++++||+|+++.|+|++....+.. +...|
T Consensus 59 ~~p~~~~Le~~lA~~~----g~~-~~i~~~s-G~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~g------- 125 (388)
T PRK07811 59 GNPTRTALEEQLAALE----GGA-YGRAFSS-GMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWG------- 125 (388)
T ss_pred CCccHHHHHHHHHHHh----CCC-ceEEeCC-HHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCC-------
Confidence 4567899999999996 443 3455554 5788887 677889999999999999875544433 22112
Q ss_pred ccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccc
Q 013521 190 KYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY 269 (441)
Q Consensus 190 ~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~ 269 (441)
++++.++..+.+.+...+ .+++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+..... .++.
T Consensus 126 --i~~~~~d~~d~e~l~~~i--~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~---~p~~ 195 (388)
T PRK07811 126 --VEYTPVDLSDLDAVRAAI--TPRTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ---QPLA 195 (388)
T ss_pred --eEEEEeCCCCHHHHHHhc--CcCCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC---Cchh
Confidence 366666542111111111 357999999999999998877 889999999999999999999854322 1221
Q ss_pred ccCCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHH
Q 013521 270 EIPGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALR 348 (441)
Q Consensus 270 ~~~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 348 (441)
. +..+++.|+||.++.+| .+.||++++++.+ .+.+...+.......++.....+...+ +.+.
T Consensus 196 -~----gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l-------~~~~~~~~~~~g~~~s~~~a~l~~~~L-----~tl~ 258 (388)
T PRK07811 196 -L----GADVVVHSTTKYIGGHSDVVGGALVTNDEEL-------DEAFAFLQNGAGAVPGPFDAYLTLRGL-----KTLA 258 (388)
T ss_pred -h----CCcEEEecCceeecCCCCcEEEEEEECCHHH-------HHHHHHHHHhcCCCCCHHHHHHHHhcc-----CcHH
Confidence 1 22399999999998544 5689999876543 344444433333334444433233333 2346
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 013521 349 TVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 349 ~~~~~~~~~~~~l~~~L~~~ 368 (441)
.+.++.+++...+.+.|+++
T Consensus 259 ~R~~~~~~na~~la~~L~~~ 278 (388)
T PRK07811 259 VRMDRHSENAEAVAEFLAGH 278 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 66677788899999999887
No 204
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.87 E-value=6e-20 Score=179.33 Aligned_cols=218 Identities=18% Similarity=0.201 Sum_probs=151.0
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchh----hHhHHHHhccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPA----YIDTSVIVGQA 181 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~ 181 (441)
+..|+ .+...+|++.+|++. +. ++.+++++++.++.. +..++++||+|+++...|.+ +...+...|
T Consensus 64 Y~r~~-~p~~~~le~~lA~l~----g~--~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G-- 134 (403)
T PRK07810 64 YSRYG-NPTVSMFEERLRLIE----GA--EACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWG-- 134 (403)
T ss_pred eeCCC-CchHHHHHHHHHHHh----CC--CcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC--
Confidence 44554 445789999999985 43 366666666677765 67788999999998866644 344455556
Q ss_pred cccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccccc
Q 013521 182 GKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYIT 261 (441)
Q Consensus 182 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~ 261 (441)
++++.++..+.+.+...+ .+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 135 ----------~~v~~vd~~d~~~l~~ai--~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~ 199 (403)
T PRK07810 135 ----------VETVFVDGEDLSQWEEAL--SVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLL 199 (403)
T ss_pred ----------cEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCcccc
Confidence 578887653211111111 367899999999999999998 88999999999999999999985433
Q ss_pred CCCCCcccccCCCcceeEEEecCCcccCCcccee-EEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC
Q 013521 262 DPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRL-GWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLS 340 (441)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 340 (441)
.. + + .. +.++++.|++|.++..|.++ |+++++++.+ .+.+...........+++.+..++..|+
T Consensus 200 ~~-~--~-~~----gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~-------~~~l~~~~~~~g~~~s~~~a~l~l~~L~ 264 (403)
T PRK07810 200 QR-G--L-PL----GADVVVYSGTKHIDGQGRVLGGAILGDREYI-------DGPVQKLMRHTGPALSAFNAWVLLKGLE 264 (403)
T ss_pred CC-h--h-hc----CCcEEEccCCceecCCcCceeEEEEeChHHH-------HHHHHHHHHHhCCCCCHHHHHHHHhccC
Confidence 21 2 1 11 23488999999998778887 8888887654 2234433334444567776655554443
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 341 PDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
.+..+.++.+++...+.+.|+++
T Consensus 265 -----tl~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 265 -----TLALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred -----cHHHHHHHHHHHHHHHHHHHhcC
Confidence 34666777788888888899877
No 205
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.87 E-value=3.4e-20 Score=181.37 Aligned_cols=212 Identities=17% Similarity=0.197 Sum_probs=144.1
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH----HHHhccccccccc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT----SVIVGQAGKFLKE 187 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~ 187 (441)
.+-..+|++.+|++. +.+ ..++++++++++.+ +..++++||+|+++.|.|...... +...|
T Consensus 64 ~p~~~~le~~lA~l~----g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G-------- 129 (403)
T PRK07503 64 NPTLALLEQRMASLE----GGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFG-------- 129 (403)
T ss_pred CchHHHHHHHHHHHh----CCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCC--------
Confidence 446788999999986 543 34555566778887 667789999999999999764333 33345
Q ss_pred cCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCc
Q 013521 188 TGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRS 267 (441)
Q Consensus 188 ~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~ 267 (441)
++++.++.++...+...+ .+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .+
T Consensus 130 ----~~v~~vd~~d~~~l~~~i--~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~---~~ 197 (403)
T PRK07503 130 ----VTVRHVDLTDPAALKAAI--SDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ---RP 197 (403)
T ss_pred ----EEEEEeCCCCHHHHHHhc--CccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC---Cc
Confidence 477777764211111111 358999999999999999998 889999999999999999999854321 12
Q ss_pred ccccCCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH--HHhhhcCCCcHHHHHHHHHhcCCCcH
Q 013521 268 IYEIPGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR--IVCTCFNGASNIVQAGGLACLSPDGF 344 (441)
Q Consensus 268 ~~~~~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~ 344 (441)
+ .. +..+++.|+||.++.+| +|.||++.++++ .+++.. .........+++.+..+.. +.
T Consensus 198 l-~~----g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l--------~~~l~~~~~~~~~g~~~s~~~a~l~l~-----~L 259 (403)
T PRK07503 198 L-EL----GADLVVHSATKYLGGHGDITAGLVVGGKAL--------ADRIRLEGLKDMTGAVMSPFDAFLLMR-----GL 259 (403)
T ss_pred h-hh----CCCEEEccccccccCCCceeEEEEEcCHHH--------HHHHHhhhHHhCcCCCCCHHHHHHHHc-----Cc
Confidence 2 12 22489999999998655 788999877665 344432 1222233455555433332 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 345 QALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 345 ~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
+.+..+.++..++.+.+.+.|+++
T Consensus 260 ~tl~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 260 KTLALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhC
Confidence 344555666678888888889876
No 206
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=3.1e-20 Score=179.50 Aligned_cols=216 Identities=19% Similarity=0.200 Sum_probs=151.1
Q ss_pred CCCC--CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHH----Hhccc
Q 013521 109 GYGA--EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSV----IVGQA 181 (441)
Q Consensus 109 ~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~ 181 (441)
.|+. .+....|+++||++. + .+++++++|+++|+.. +..++++||+|++.+|.|++....+. ..|
T Consensus 54 ~Y~r~~npt~~~Le~~iA~le----~--~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~G-- 125 (394)
T PRK09028 54 FYGRRGTPTHFAFQAAIVELE----G--GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFG-- 125 (394)
T ss_pred eecCCCCchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcc--
Confidence 4554 345679999999874 2 3578999999999997 67889999999999999988766442 233
Q ss_pred cccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccccc
Q 013521 182 GKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYIT 261 (441)
Q Consensus 182 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~ 261 (441)
+++..++.++.+.+...+ .+++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+....
T Consensus 126 ----------i~v~~v~~~~~e~l~~~l--~~~TklV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a~p~~ 190 (394)
T PRK09028 126 ----------IETTYYDPMIGEGIRELI--RPNTKVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWASPIN 190 (394)
T ss_pred ----------eEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCcccccc
Confidence 466666543221221111 368999999999999987755 99999999999999999999984211
Q ss_pred CCCCCcccccCCCcceeEEEecCCcccCC-ccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC
Q 013521 262 DPSPRSIYEIPGAREVAIEISSFSKFAGF-TGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLS 340 (441)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~i~S~SK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 340 (441)
-.| + . .+.++++.|.+|.++- ..+..|+++.+++. .+.+...........++.....+
T Consensus 191 -~~P--l-~----~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~--------~~~l~~~~~~~G~~~~p~~a~l~----- 249 (394)
T PRK09028 191 -SRP--F-E----MGVDISIQAATKYIVGHSDVMLGTATANEKH--------WDQLREHSYLMGQCTSPDDVYLA----- 249 (394)
T ss_pred -CCc--c-c----cCceEEEEeCCeEecCCCCEEEEEEECCHHH--------HHHHHHHHHhcCCCCCHHHHHHH-----
Confidence 112 1 1 2345999999999943 34667877765544 23344333334444555543222
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 341 PDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
..+.+.+.-+.++..++...+.+.|+++
T Consensus 250 ~rgl~TL~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 250 MRGLRTLGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred HcccCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 2445556778888899999999999987
No 207
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.87 E-value=8.8e-20 Score=179.76 Aligned_cols=328 Identities=14% Similarity=0.133 Sum_probs=200.2
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC---CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYG---AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~---~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al 148 (441)
.+++.|+.+... +.|+.+.+++.+.+..+........+. ......+.++.+ + .+++++++|++|+|+++++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----l~g~~~~~v~~~~~~t~~l 99 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-R----LVGAKEDEVVVMNTLTINL 99 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-c----ccCCCCCcEEEeCCchHHH
Confidence 457999977755 568999999998877654322211121 111122222333 3 3588999999999999999
Q ss_pred HH-HHHhcCCC---CEEEEeCCCchhhHhHH----HHhccccccccccCcccee----EEeecCCCCCccCC-CCC----
Q 013521 149 SR-LQMLLGSN---VTVAVQDPSFPAYIDTS----VIVGQAGKFLKETGKYRNI----VYMNCRPENNFFPD-LST---- 211 (441)
Q Consensus 149 ~~-l~~l~~~g---d~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~v----~~v~~~~~~~~~~~-~~~---- 211 (441)
++ +..+++++ +.|++....|++....+ +..| .++ +.++.+.++...++ ++.
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g------------~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 167 (406)
T TIGR01814 100 HLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHG------------LTVEESMVQIEPREEETLRLEDILDTIEK 167 (406)
T ss_pred HHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcC------------CCcccceEEeccCCCCccCHHHHHHHHHh
Confidence 98 56666664 36888889998854433 2334 244 45554432222221 211
Q ss_pred -CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccC-
Q 013521 212 -TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAG- 289 (441)
Q Consensus 212 -~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~- 289 (441)
.+++++|++++++|.||.+++ +++|+++|+++|+++++|++++.-.. +..+.. .+..+++.|.+|+++
T Consensus 168 ~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~---~id~~~----~gvD~~~~s~hK~l~g 237 (406)
T TIGR01814 168 NGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNV---PLDLHD----WGVDFACWCTYKYLNA 237 (406)
T ss_pred cCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCCc---cccccc----CCCCEEEEcCccccCC
Confidence 367899999999999999999 88999999999999999999984211 233322 244599999999874
Q ss_pred CccceeEEEEeeccccccCCchhHHH--------HHH-----H--HhhhcCCCcHHHHHH---HHHhcCCCcHHHHHHHH
Q 013521 290 FTGVRLGWTVVPEELRYSNGYPVIKD--------FNR-----I--VCTCFNGASNIVQAG---GLACLSPDGFQALRTVI 351 (441)
Q Consensus 290 ~~G~r~G~l~~~~~~~~~~~~~~~~~--------~~~-----~--~~~~~~~~~~~~~~a---~~~~l~~~~~~~~~~~~ 351 (441)
.|| |.+++.++......+..... +.. . ......+++.....+ ++..+.+.+ +++.+
T Consensus 238 ~pG---~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g---~~~i~ 311 (406)
T TIGR01814 238 GPG---AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAG---MEALR 311 (406)
T ss_pred CCC---eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcC---HHHHH
Confidence 344 33433332211100000000 000 0 000012233334333 333443333 36777
Q ss_pred HHHHHHHHHHHHHHHhC-----CCeeeCCC----CceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE
Q 013521 352 DYYKENAKIIVDAFQSL-----GLKVNGGK----NAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS 422 (441)
Q Consensus 352 ~~~~~~~~~l~~~L~~~-----g~~~~~~~----~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls 422 (441)
++.++..+++.+.|++. ++++..+. .+..+.+.++ ....++.+.|. ++||.+... .++.||+|
T Consensus 312 ~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~~~~~~~~L~-~~gi~v~~~------~~~~iRiS 383 (406)
T TIGR01814 312 KKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VPGKAVFQALI-KRGVIGDKR------EPSVIRVA 383 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CCHHHHHHHHH-HCCEEEecc------CCCeEEEe
Confidence 78888888888888764 36665542 2345667776 45566767765 459987532 24689999
Q ss_pred e---ecCHHHHHHHHHHHHhhC
Q 013521 423 A---FGHREYISEACRRLKNFL 441 (441)
Q Consensus 423 ~---~~~~~~~~~~l~~l~~~l 441 (441)
+ ++++++++++++.|++++
T Consensus 384 ~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 384 PVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred chhccCCHHHHHHHHHHHHHHh
Confidence 6 458999999999998764
No 208
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.87 E-value=5.9e-20 Score=180.12 Aligned_cols=332 Identities=14% Similarity=0.129 Sum_probs=201.7
Q ss_pred CCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
+++++|+..|- ..+ ..+|.+.+++.+.+.+... ....|. ..-..+|.+.++++ .+ .+.+++++++++|
T Consensus 34 G~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~~~-~~~~~~la~~L~~~----~~--~~~~~f~~SGseA 104 (397)
T TIGR03246 34 GKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWH--IGNGYT-NEPVLRLAKKLVDA----TF--ADKVFFCNSGAEA 104 (397)
T ss_pred CCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccc--ccCccC-CHHHHHHHHHHHhh----CC--CCEEEEeCCcHHH
Confidence 56788987752 212 3689999999998875321 111222 22234555555554 23 4689999999998
Q ss_pred HHH-HHHh--c------CCCCEEEEeCCCchhhHhHHHH-hcccc---ccccccCccceeEEeecCCCCCccCCCCC--C
Q 013521 148 ISR-LQML--L------GSNVTVAVQDPSFPAYIDTSVI-VGQAG---KFLKETGKYRNIVYMNCRPENNFFPDLST--T 212 (441)
Q Consensus 148 l~~-l~~l--~------~~gd~Vlv~~p~y~~~~~~~~~-~g~~~---~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~ 212 (441)
... +... . ...+.|+..+-+|++....... .+... .+.+.. ..+..++.++. .++++ .
T Consensus 105 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~----~~l~~~l~ 177 (397)
T TIGR03246 105 NEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLP---GGIKHAPYNDL----AAAKALIS 177 (397)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCC---CceEEeCCCCH----HHHHHHhc
Confidence 876 4222 1 1235788888888886433322 22110 000000 12333333211 11111 2
Q ss_pred CCccEEEEcCCCCccccCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCc
Q 013521 213 SRTDIIFFCSPNNPTGHAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFT 291 (441)
Q Consensus 213 ~~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~ 291 (441)
+++++|++..++++.|... +.+.+++|.++|++||+++|.||+|..+...+.......+.-.+| +-++||.+| +
T Consensus 178 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pD----i~t~~K~lg-g 252 (397)
T TIGR03246 178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----ILTSAKALG-G 252 (397)
T ss_pred cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCC----EEEeehhhh-C
Confidence 4677777654455566554 899999999999999999999999976644432211112221233 337999998 8
Q ss_pred cceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 013521 292 GVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG-- 369 (441)
Q Consensus 292 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-- 369 (441)
|+++||+++++++. +.+.........+.+++.+.++.+.++... -+++.+.++++.+++.+.|++++
T Consensus 253 G~pigav~~~~~i~--------~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~ 321 (397)
T TIGR03246 253 GFPIGAMLTTTEIA--------AHLKVGTHGTTYGGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKINAR 321 (397)
T ss_pred CcceeEEEEcHHHH--------HhccCCCcCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998773 333322222334467888888888886321 14567888888888888887753
Q ss_pred --CeeeCCCCceEEEEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 370 --LKVNGGKNAPYVWVQFPG---SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 370 --~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+.......|.++.+.+.. .....+...++++ ||.+.+. +.+++|++ +..+++++++++++|.+++
T Consensus 322 ~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~-Gv~~~~~------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l 393 (397)
T TIGR03246 322 YNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEE-GVIALIA------GPNVVRFAPSLVISDDDIDEGLARFERAI 393 (397)
T ss_pred CCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHHC-CeEEeec------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 111111235555565532 1344566666654 9998763 24689995 5669999999999998763
No 209
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.87 E-value=9.9e-20 Score=176.46 Aligned_cols=301 Identities=15% Similarity=0.207 Sum_probs=186.0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHh-cCCCCEEEEe
Q 013521 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQML-LGSNVTVAVQ 164 (441)
Q Consensus 87 ~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l-~~~gd~Vlv~ 164 (441)
.+...+++.+.+.. ... + |..++++++.+++.+.++ .+++++|+|+++++.+ +..+ ++|||+|+++
T Consensus 10 ~~~e~~a~~~~~~~----~~~--~----~~g~~~~~~e~~la~~~g--~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~ 77 (376)
T TIGR02379 10 TGQELEYIAEAISE----GKL--S----GDGPFSRRCETWLENRTG--TKKALLTPSCTAALEMAALLLDIQPGDEVIMP 77 (376)
T ss_pred CHHHHHHHHHHHHc----CCc--c----CCcHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence 45567788887753 111 1 223456666666654434 4689999999999987 5555 7999999999
Q ss_pred CCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHH
Q 013521 165 DPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSPNNPTGHAATWQQLKKL 239 (441)
Q Consensus 165 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i 239 (441)
.|+|++....+...| .+++.++++++ ++.+|++. .+++++|+ |+||||...+ +++|
T Consensus 78 ~~t~~~~~~~~~~~G------------~~~v~vd~d~~-~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I 138 (376)
T TIGR02379 78 SYTFVSTANAFVLRG------------AKIVFVDIRPD-TMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTI 138 (376)
T ss_pred CCCcHHHHHHHHHcC------------CEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHH
Confidence 999999988888888 58999999865 34455322 36788876 6778999988 7799
Q ss_pred HHHHHHcCcEEEEcccccccc-cCCCCCcccccCCCcceeEEEecCC----cccCCccceeEEEEeeccccccCCchhHH
Q 013521 240 VEFAKANGSIIVYDSAYAAYI-TDPSPRSIYEIPGAREVAIEISSFS----KFAGFTGVRLGWTVVPEELRYSNGYPVIK 314 (441)
Q Consensus 240 ~~~a~~~~~~ii~De~~~~~~-~~~~~~~~~~~~~~~~~~i~i~S~S----K~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 314 (441)
.++|++||++||+|++|+... +++.+ +..+ ..+++|| |.+. +|.+.|+++++++.+ .+
T Consensus 139 ~~la~~~~i~vIeDaa~~~g~~~~~~~--~g~~-------~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~-------~~ 201 (376)
T TIGR02379 139 MALANKHQLFVIEDAAQGVMSTYKGRA--LGSI-------GHLGTFSFHETKNYT-SGGEGGALLINDQAF-------IE 201 (376)
T ss_pred HHHHHHCCCEEEEECccccCCccCCcc--cCCC-------CCEEEEeCCCCCcCc-ccCCceEEEECCHHH-------HH
Confidence 999999999999999998654 33322 2111 1234444 8885 888999999886543 34
Q ss_pred HHHHHHhhhc-----------------CC----CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC---C-
Q 013521 315 DFNRIVCTCF-----------------NG----ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL---G- 369 (441)
Q Consensus 315 ~~~~~~~~~~-----------------~~----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g- 369 (441)
++..++.... .+ .+.+ |+ +... ...+.+++..+.-++..+...+.|.++ +
T Consensus 202 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~-~A-a~g~---~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~ 276 (376)
T TIGR02379 202 RAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSEL-QA-AYLW---AQLEQADRINQDRLATWQLYQDALKPLEEKGI 276 (376)
T ss_pred HHHHHHHhCCCCccccccCCCcceeeeecccCCccHH-HH-HHHH---HHHHHhHHHHHHHHHHHHHHHHHhccCCcCCe
Confidence 4444433211 01 1111 21 1111 122334555555555555566666543 2
Q ss_pred CeeeC-CCCc----eEEEEEcCC-CChHHHHHHHHHhcCeEEeCCC----CcC------C-CC---------CCeEEEEe
Q 013521 370 LKVNG-GKNA----PYVWVQFPG-SSSWDVFAEILEKTHILTIPGS----GFG------P-GG---------NEHIRVSA 423 (441)
Q Consensus 370 ~~~~~-~~~~----~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~----~f~------~-~~---------~~~iRls~ 423 (441)
+.+.. +++. .+.++.++. .+..++.+.|. ++||.+++.. ... . .+ ...+.|-+
T Consensus 277 ~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~ 355 (376)
T TIGR02379 277 IELPSIPNGCQHNAHMFYIKLKDEDDRNELIKYLK-EQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPL 355 (376)
T ss_pred eeCCCCCCCCeeeeEEEEEEECCcCCHHHHHHHHH-HCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccC
Confidence 22211 1121 234566653 24456666554 5599887432 110 0 00 23455555
Q ss_pred ec--CHHHHHHHHHHHHhhC
Q 013521 424 FG--HREYISEACRRLKNFL 441 (441)
Q Consensus 424 ~~--~~~~~~~~l~~l~~~l 441 (441)
.. ++++++..++.|++++
T Consensus 356 ~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 356 YYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CCCCCHHHHHHHHHHHHHHh
Confidence 33 7899999999998753
No 210
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.87 E-value=2e-19 Score=178.78 Aligned_cols=341 Identities=11% Similarity=0.084 Sum_probs=198.8
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCC-CcEEEcCCcH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEG-DEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~I~~t~G~~ 145 (441)
.++..+|+..|-. .+ ..+|.+.+++.+.+.+... .....+ ..+.+..+|+.|....+... +.++++++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~-----~~~~~~~la~~L~~~~p~~~~~~v~f~~sGs 125 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIH-TGFNVM-----MYEPYIELAEKLAALAPGSFDKKVLFLNSGA 125 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccC-cccccc-----ccHHHHHHHHHHHHhCCCCCCCEEEEcCCcH
Confidence 4567888876642 22 3678899999998875321 011111 12344555555544233222 6899999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHh-ccccc----cccccCccceeEEeecCCC----CCccC------
Q 013521 146 SDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIV-GQAGK----FLKETGKYRNIVYMNCRPE----NNFFP------ 207 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~----~~~~~~~~~~v~~v~~~~~----~~~~~------ 207 (441)
+|... + .........|+....+|++....+... +.... +.+.. ..+..+|.... .+...
T Consensus 126 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (451)
T PRK06918 126 EAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFA---PEVYKAPFPYEYRRPEGLTEEQYDDF 202 (451)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCC---CCcEEcCCCccccccccCchHHHHHH
Confidence 99886 3 222334467888999999975544433 21100 00000 11222222110 00000
Q ss_pred ---CC-------CCCCCccEEEEcCCCCcc-ccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCc
Q 013521 208 ---DL-------STTSRTDIIFFCSPNNPT-GHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275 (441)
Q Consensus 208 ---~~-------~~~~~~~~v~i~~p~NPt-G~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~ 275 (441)
.+ ....++. .+|..|-... |.+++ .+.+++|.++|++||+++|+||+|..|...+.+.+...++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~iA-avi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~p 281 (451)
T PRK06918 203 MIEEFKNFFISEVAPETIA-AVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVP 281 (451)
T ss_pred HHHHHHHHHHhhcCCCceE-EEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCC
Confidence 00 0112344 4556884444 66554 5559999999999999999999999887665444444443234
Q ss_pred ceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC---CCcH-HHHHHHH
Q 013521 276 EVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLS---PDGF-QALRTVI 351 (441)
Q Consensus 276 ~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~~~~-~~~~~~~ 351 (441)
| +.||||.++ +|+|+||++++++++ +.+.........+.+++.|.++.+.++ +... ++++.+.
T Consensus 282 D----i~t~sK~l~-~G~pig~v~~~~~i~--------~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g 348 (451)
T PRK06918 282 D----LITVSKSLG-AGVPISGVIGRKEIM--------DESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELG 348 (451)
T ss_pred C----EEeeehhhc-CCCccEEEEEcHHHH--------hccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4 558999998 999999999998874 333322333455678899998777765 2222 3344444
Q ss_pred HHHHHHHHHHHHHHHhCC-CeeeCCCCceEEEEEcCC----CCh----HHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE
Q 013521 352 DYYKENAKIIVDAFQSLG-LKVNGGKNAPYVWVQFPG----SSS----WDVFAEILEKTHILTIPGSGFGPGGNEHIRVS 422 (441)
Q Consensus 352 ~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~----~~~----~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls 422 (441)
+.++++.+.+.+ +++ +....+.++++.|....+ ..+ ..+...+ .++||.+.|+..|+ +++||+
T Consensus 349 ~~l~~~l~~l~~---~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~~----~~lrl~ 420 (451)
T PRK06918 349 KVVMNRFEEMKN---KYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTYG----NVIRVL 420 (451)
T ss_pred HHHHHHHHHHHh---hCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCCC----CEEEEE
Confidence 333333333222 232 222334566666655421 111 2233333 45699999986653 689999
Q ss_pred e--ecCHHHHHHHHHHHHhhC
Q 013521 423 A--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 423 ~--~~~~~~~~~~l~~l~~~l 441 (441)
+ ..+++++++++++|.+++
T Consensus 421 p~l~~t~~~id~~l~~l~~~l 441 (451)
T PRK06918 421 MPLVITDEQLEEGLTIIEESL 441 (451)
T ss_pred CCCccCHHHHHHHHHHHHHHH
Confidence 6 358999999999998764
No 211
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.87 E-value=1.5e-19 Score=177.92 Aligned_cols=343 Identities=9% Similarity=0.047 Sum_probs=203.7
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCcH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI-EGDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~~ 145 (441)
.++..+|+..|- ..+ ..+|.+.+++.+.+.+.. ...+. ....+....+|+.+.+..+. ..+.++++++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~----~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGs 111 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFT----HTAYQ--IVPYESYVTLAEKINALAPVSGQAKTAFFTTGA 111 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhcc----CcccC--ccCCHHHHHHHHHHHHhCCCCCCceEEEeCChH
Confidence 456788886553 222 367899999999987632 11111 01223334455555432222 236889999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHh-ccc----cccccccCccceeEEeecCCC-CCccC-----CCCC
Q 013521 146 SDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIV-GQA----GKFLKETGKYRNIVYMNCRPE-NNFFP-----DLST 211 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~----~~~~~~~~~~~~v~~v~~~~~-~~~~~-----~~~~ 211 (441)
+|+.. + ........+|+....+|++....+... +.. ..+.+.. ..+..+|...+ .+... .++.
T Consensus 112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~---~~~~~v~~p~~~~~~~~~~~~~~l~~ 188 (421)
T PRK09792 112 EAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFP---GSVYHVPYPSDLHGISTQDSLDAIER 188 (421)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCC---CCcEEcCCCcccccccHHHHHHHHHH
Confidence 99886 4 222333467999999999975443332 211 0011100 12333333211 11100 1111
Q ss_pred -------CCCccEEEEcCCCCccccCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEec
Q 013521 212 -------TSRTDIIFFCSPNNPTGHAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283 (441)
Q Consensus 212 -------~~~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S 283 (441)
..++++|++.-.++|+|..+ |++.+++|.++|++||+++|+||++..|...+.+.+...+...+| +.|
T Consensus 189 ~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD----i~t 264 (421)
T PRK09792 189 LFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD----LMT 264 (421)
T ss_pred HHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc----EEE
Confidence 13566766543399999876 999999999999999999999999998876654444444433445 678
Q ss_pred CCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHH
Q 013521 284 FSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIV 362 (441)
Q Consensus 284 ~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~ 362 (441)
|||.++ +|+|+||+++++++. +.+.......+.+.+++.+.++.+.++--.. .++++.+ .+.++.+...
T Consensus 265 ~gK~l~-~G~pigav~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~-~~g~~l~~~l 334 (421)
T PRK09792 265 MAKSLA-GGMPLSGVVGNANIM--------DAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERAN-QLGQRLKNTL 334 (421)
T ss_pred eehhhc-CCCceEEEEEcHHHH--------hccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHHHH
Confidence 999998 999999999988874 2222222334455788899877766652111 2334443 2233322222
Q ss_pred HHHH-hCCCeeeCCCC-ceEEEEEcCCC--------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHH
Q 013521 363 DAFQ-SLGLKVNGGKN-APYVWVQFPGS--------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYI 430 (441)
Q Consensus 363 ~~L~-~~g~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~ 430 (441)
+.|. +++... ...+ |.++|++++.. ....+...+++ +||.+.+.. ...+.|||.. ..+++++
T Consensus 335 ~~l~~~~p~v~-~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~g----~~~~~irl~P~l~i~~~ei 408 (421)
T PRK09792 335 IDAKESVPAIA-AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALA-QGLLLLTCG----AYGNVIRFLYPLTIPDAQF 408 (421)
T ss_pred HHHHHhCCCcc-eecccceEEEEEecCCccCCcchHHHHHHHHHHHH-CCcEEeecC----CCCCEEEEeCCCcCCHHHH
Confidence 3332 234322 2345 89999999632 12345555555 599996421 1257899995 3589999
Q ss_pred HHHHHHHHhhC
Q 013521 431 SEACRRLKNFL 441 (441)
Q Consensus 431 ~~~l~~l~~~l 441 (441)
++++++|.+++
T Consensus 409 ~~~~~~l~~~l 419 (421)
T PRK09792 409 DAAMKILQDAL 419 (421)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 212
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.87 E-value=2.6e-19 Score=176.66 Aligned_cols=340 Identities=11% Similarity=0.074 Sum_probs=197.9
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCcH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI-EGDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~~ 145 (441)
.++..+|+..|.. .+ ..+|.+.+++.+.+.+.. ...+. ....+.+..+|+.+.+..+. ..+.++++++++
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~----~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 104 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFT----HTCFM--VTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGA 104 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhcc----Ccccc--ccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 3567888876642 22 357889999999887532 11111 01122333444444332221 236899999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHh-ccc----cccccccCccceeEEeecCCCC---------Ccc--
Q 013521 146 SDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIV-GQA----GKFLKETGKYRNIVYMNCRPEN---------NFF-- 206 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~----~~~~~~~~~~~~v~~v~~~~~~---------~~~-- 206 (441)
+|+.. + .........|+....+|++....+... +.. ..+.+.. ..+..++..... .+.
T Consensus 105 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (420)
T TIGR00700 105 EAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFA---PEVYRAPLPYPYRDGLLDKQLSTDGE 181 (420)
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCC---CCcEEeCCCccccccccccchhHHHH
Confidence 99886 4 222334467888899999975444433 210 0010000 122223221000 000
Q ss_pred C-CCC-------CCCCccEEEEcCC-CCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcc
Q 013521 207 P-DLS-------TTSRTDIIFFCSP-NNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGARE 276 (441)
Q Consensus 207 ~-~~~-------~~~~~~~v~i~~p-~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~ 276 (441)
. .++ ..+++.+|++ .| +.-+|.+++ .+.+++|.++|++||+++|+||+|..|...+...+.....-.+|
T Consensus 182 ~~~~~~~~~~~~~~~~iAavi~-Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pD 260 (420)
T TIGR00700 182 LAAARAIFVIDVGANNVAALVI-EPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPD 260 (420)
T ss_pred HHHHHHHHHhhcCCCcEEEEEE-CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCC
Confidence 0 010 1245556554 66 666888765 44599999999999999999999998866553323322322233
Q ss_pred eeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC---CCcH-HHHHHHHH
Q 013521 277 VAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLS---PDGF-QALRTVID 352 (441)
Q Consensus 277 ~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~~~~-~~~~~~~~ 352 (441)
+.+|||.++ +|+|+||++++++++ +.+.......+.+.++++|.++.+.++ +... ++.+++.+
T Consensus 261 ----i~~lsK~l~-~G~pig~v~~~~~i~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~ 327 (420)
T TIGR00700 261 ----LITTAKSLA-DGLPLSGVTGRAEIM--------DAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGR 327 (420)
T ss_pred ----EEEeecccc-CCcceEEEEecHHHH--------hhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 456999998 999999999998874 333222233455678999998877764 2222 22333333
Q ss_pred HHHHHHHHHHHHHHhCC-CeeeCCCCceEEEEEcCCC----ChH----HHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe
Q 013521 353 YYKENAKIIVDAFQSLG-LKVNGGKNAPYVWVQFPGS----SSW----DVFAEILEKTHILTIPGSGFGPGGNEHIRVSA 423 (441)
Q Consensus 353 ~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~----~~~----~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~ 423 (441)
.++ +.+.+..++++ +....+ .|.++|+++... .+. .+...+ .++||.+.|+..|+ ++|||+.
T Consensus 328 ~l~---~~L~~l~~~~~~~~~vrg-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f~----~~lRl~p 398 (420)
T TIGR00700 328 LVT---DRLTTLKAVDPRIGDVRG-LGAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMFG----NIIRFLP 398 (420)
T ss_pred HHH---HHHHHHHhhCCCEEEeec-cceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCCC----CEEEEEC
Confidence 322 22323223333 323333 488888887311 122 233333 45699999987764 6899996
Q ss_pred e--cCHHHHHHHHHHHHhhC
Q 013521 424 F--GHREYISEACRRLKNFL 441 (441)
Q Consensus 424 ~--~~~~~~~~~l~~l~~~l 441 (441)
. .+++++++++++|.+++
T Consensus 399 ~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 399 PLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred CCCcCHHHHHHHHHHHHHHh
Confidence 3 48999999999999874
No 213
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=9.1e-20 Score=177.14 Aligned_cols=215 Identities=17% Similarity=0.150 Sum_probs=146.1
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCcc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKY 191 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 191 (441)
.+...+|++.+|+++ + .+++++++|+++|+.. +..++++||+|+++.|.|.+....+..+...|
T Consensus 52 np~~~~lE~~lA~l~----g--~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g--------- 116 (385)
T PRK08574 52 NPTLRPLEEALAKLE----G--GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFG--------- 116 (385)
T ss_pred CccHHHHHHHHHHHh----C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccC---------
Confidence 457889999999986 4 3577888888999887 67889999999999999999877765442222
Q ss_pred ceeEEeecCCCCCccCCCCCCC-CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccc
Q 013521 192 RNIVYMNCRPENNFFPDLSTTS-RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYE 270 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~ 270 (441)
+++..+..+.+ .+...+ .+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++ .
T Consensus 117 ~~v~~~~~d~~-~l~~~i--~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~---~~l-~ 186 (385)
T PRK08574 117 VKVVLAYPSTE-DIIEAI--KEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY---RPL-R 186 (385)
T ss_pred cEEEEECCCHH-HHHHhc--CccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC---Chh-h
Confidence 35555543321 111111 23 7899999999999999999 779999999999999999998632211 112 1
Q ss_pred cCCCcceeEEEecCCcccCCccce-eEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHH
Q 013521 271 IPGAREVAIEISSFSKFAGFTGVR-LGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRT 349 (441)
Q Consensus 271 ~~~~~~~~i~i~S~SK~~~~~G~r-~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 349 (441)
. +.++++.|+||.++.+|-. .|++++.++.+ .+++...+.......+++....++.. .+.+..
T Consensus 187 ~----GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~-------~~~~~~~~~~~g~~~~p~~a~l~l~~-----l~tL~~ 250 (385)
T PRK08574 187 H----GADFVVHSLTKYIAGHNDVVGGVAVAWSGEF-------LEELWEWRRRLGTIMQPFEAYLVLRG-----LKTLEV 250 (385)
T ss_pred h----CCcEEEeeCceeecCCCCceeEEEEECcHHH-------HHHHHHHHHhcCCCCCHHHHHHHHcc-----cCcHHH
Confidence 1 2359999999999756655 47667644332 34444444433334455433222222 333456
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 013521 350 VIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 350 ~~~~~~~~~~~l~~~L~~~ 368 (441)
+.++..++...+.+.|+++
T Consensus 251 R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 6677777888888899876
No 214
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.86 E-value=1.3e-20 Score=170.63 Aligned_cols=325 Identities=18% Similarity=0.236 Sum_probs=194.5
Q ss_pred EEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCC-----CcCcHHHHHHHHHHHhh-h-CCCCCCcEEEcCCcHHH
Q 013521 75 IRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGA-----EQGNMALRTAIADKFYK-D-MGIEGDEIFISDGAQSD 147 (441)
Q Consensus 75 i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l~~-~-~~~~~~~I~~t~G~~~a 147 (441)
+|++.|+|.+. ++.|....+.-.-....-...+|.. ..-.++|.+.|.+.... | --.+...|++++|+++.
T Consensus 1 ~d~d~GDP~~~--E~yW~~~~~~~avvi~gw~rMSY~~~~~~~~f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL 78 (363)
T PF04864_consen 1 ADADSGDPTFF--EPYWRRHGDSSAVVIPGWHRMSYFSDSSNGWFISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQL 78 (363)
T ss_dssp EEESS---GGG--HHHHCCTHHHH-EEE-TTTT-SSSS-TTSSTTS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHH
T ss_pred CCcCCCCchhh--HHHHHhcCcceeEEEeccccceeEEecCCceeccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHH
Confidence 47778887643 4444433333221111122234443 23458888888876543 3 22456699999999999
Q ss_pred HHH-HHHhcC----CC--CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEE
Q 013521 148 ISR-LQMLLG----SN--VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFF 220 (441)
Q Consensus 148 l~~-l~~l~~----~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i 220 (441)
++. +.+|.. .+ -.|+...|-|+.|......+... ...+ .-|. ..|. + .....+-+=++
T Consensus 79 ~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~-----------~y~w-~Gda-~~~~-~-~~~~~~~IElV 143 (363)
T PF04864_consen 79 FNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSR-----------LYKW-AGDA-SNFK-N-SDNPSPYIELV 143 (363)
T ss_dssp HHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BT-----------TEEE-EEEC-CCGT-T--S-CCGEEEEE
T ss_pred HHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhcccc-----------Cccc-cccH-Hhhc-c-CCCCCCeEEEE
Confidence 997 555531 11 37899999999998776555421 1111 1111 1221 0 11134445577
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 221 CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 221 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
++||||.|.+ ++.++ +..+..+|.|-+|.+-.+.. +.. ..|..|.+.|+||.-|-+|.|+||.++
T Consensus 144 TSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp----I~~---~aD~DiMLFT~SK~TGHAGSR~GWAlV 208 (363)
T PF04864_consen 144 TSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP----ITA---PADHDIMLFTLSKLTGHAGSRFGWALV 208 (363)
T ss_dssp ESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS-------S----B--SEEEEEHHHHCS-GGG-EEEEEE
T ss_pred eCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc----cCC---CCCCceEEEEEecccCccccccceeee
Confidence 8999999987 55555 34556789999998744442 221 124459999999999999999999999
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCC----CcH-----HHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSP----DGF-----QALRTVIDYYKENAKIIVDAFQSL-GL 370 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~-----~~~~~~~~~~~~~~~~l~~~L~~~-g~ 370 (441)
.++.+ .+.+..+......++|.=+|.-++.+|+. .+. +..+--++..++|.+.|.+.+..- -+
T Consensus 209 KD~~V-------a~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rF 281 (363)
T PF04864_consen 209 KDEEV-------AKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRF 281 (363)
T ss_dssp S-HHH-------HHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSE
T ss_pred cCHHH-------HHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCce
Confidence 98886 66777777778888999999888887761 111 245666788888999999998765 22
Q ss_pred eee--C-----------CCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHH
Q 013521 371 KVN--G-----------GKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRL 437 (441)
Q Consensus 371 ~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l 437 (441)
.+. . .+...|.|++++...+ +-+...|++.||..+.|..|+. ++.++|||+-.++++++.++++|
T Consensus 282 SLq~~~~~yC~ff~~~~~psPafAWlkCe~eed-~DC~~~l~~~~I~tr~G~~fga-~~ryVRlSml~~~d~Fd~l~~rL 359 (363)
T PF04864_consen 282 SLQKFSPQYCNFFKRVREPSPAFAWLKCEREED-EDCYAVLREAKIITRSGVLFGA-DSRYVRLSMLKRDDDFDQLLERL 359 (363)
T ss_dssp EE---SCEEETTTTCEEE---SEEEEEESSCGG-SSHHHHHHCTTEEEEEGGGGTS--TTEEEEESSS-HHHHHHHHHHH
T ss_pred ecCcCCchhccccccccCCCCCeEEEecCCccc-ccHHHHHHhCCcccCCCCccCC-CCCeEEEeccCCHHHHHHHHHHH
Confidence 221 1 1245699999984332 3456667788999999999986 68899999988999999999999
Q ss_pred Hhh
Q 013521 438 KNF 440 (441)
Q Consensus 438 ~~~ 440 (441)
..+
T Consensus 360 ~~l 362 (363)
T PF04864_consen 360 SKL 362 (363)
T ss_dssp HCC
T ss_pred Hhh
Confidence 875
No 215
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=9.7e-20 Score=177.44 Aligned_cols=217 Identities=18% Similarity=0.220 Sum_probs=145.2
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHH----HHhccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTS----VIVGQA 181 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~ 181 (441)
+..|+ .+-..+|++.+|++. +.+ ..++++++++++.+ +..++++||+|+++.|.|.+....+ ...|
T Consensus 53 y~r~~-~p~~~~le~~lA~l~----g~~--~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G-- 123 (391)
T TIGR01328 53 YSRLG-NPTVSNLEGRIAFLE----GTE--AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFG-- 123 (391)
T ss_pred eeCCC-CchHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCC--
Confidence 33443 345778999999996 543 35667777778876 6778899999999999887644333 3344
Q ss_pred cccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccccc
Q 013521 182 GKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYIT 261 (441)
Q Consensus 182 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~ 261 (441)
.+++.++.++...+...+ .+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 124 ----------~~~~~vd~~d~e~l~~~i--~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~ 188 (391)
T TIGR01328 124 ----------IQVDFINMAIPEEVKAHI--KDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPML 188 (391)
T ss_pred ----------eEEEEECCCCHHHHHHhh--ccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhcc
Confidence 477777764211111111 367899999999999999998 78889999999999999999985332
Q ss_pred CCCCCcccccCCCcceeEEEecCCcccCCcccee-EEEEeeccccccCCchhHHHHHHHHh--hhcCCCcHHHHHHHHHh
Q 013521 262 DPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRL-GWTVVPEELRYSNGYPVIKDFNRIVC--TCFNGASNIVQAGGLAC 338 (441)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~ 338 (441)
. .++. . +..+++.|+||.+|.+|.++ |++++++++ ++.+..... ......+++....+...
T Consensus 189 ~---~~~~-~----g~Divv~S~sK~lgg~g~~~gG~v~~~~~l--------i~~l~~~~~~~~~g~~l~~~~a~l~l~~ 252 (391)
T TIGR01328 189 T---NPVA-L----GVDVVVHSATKYIGGHGDVVAGLICGKAEL--------LQQIRMVGIKDMTGSVISPFDAWLILRG 252 (391)
T ss_pred C---Cchh-c----CCCEEEccccccccCCCCceEEEEEcCHHH--------HHHHHHHHHHhCCCCCCCcHHHHHHHhC
Confidence 1 1121 1 22388999999999888774 677776665 334443221 11222344443333322
Q ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 339 LSPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 339 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
+ +.+..+.++.+++.+.+.+.|+++
T Consensus 253 L-----~tl~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 253 L-----KTLNIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred c-----CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 234556777888899999999887
No 216
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=1.6e-19 Score=175.28 Aligned_cols=266 Identities=19% Similarity=0.180 Sum_probs=171.5
Q ss_pred cHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHH----HhccccccccccCcc
Q 013521 116 NMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSV----IVGQAGKFLKETGKY 191 (441)
Q Consensus 116 ~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~~~~~~ 191 (441)
..+|++.+++++ +. ++++++++++.++.++..++++||+|+++.+.|++....+. ..|
T Consensus 49 ~~~le~~la~l~----g~--~~~l~~~sG~~al~~~l~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G------------ 110 (378)
T TIGR01329 49 RTALESLLAKLD----KA--DRAFAFSSGMAALDVITRLLNNGDEIIAGDDLYGGTDRLLTQVVPRSG------------ 110 (378)
T ss_pred HHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHHHHHcC------------
Confidence 456666676664 54 56666666677888765688999999999999988765433 345
Q ss_pred ceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc
Q 013521 192 RNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI 271 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~ 271 (441)
.+++.++..+.+.+...+ .+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... ..++ ..
T Consensus 111 ~~v~~vd~~d~~~le~~i--~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~---~~~l-~~ 181 (378)
T TIGR01329 111 VVVVHVDTTDLDKVKAAL--GPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLL---CNPL-EL 181 (378)
T ss_pred cEEEEeCCCCHHHHHHhc--CcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCccccc---CChh-hc
Confidence 478888764221221111 368999999999999999998 99999999999999999999853211 1222 22
Q ss_pred CCCcceeEEEecCCcccCC-ccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHH
Q 013521 272 PGAREVAIEISSFSKFAGF-TGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTV 350 (441)
Q Consensus 272 ~~~~~~~i~i~S~SK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 350 (441)
+..+++.|++|.++. .+++.|+++++++.+ .+++...+.......++.... ++. .+.+.+..+
T Consensus 182 ----g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~-------~~~~~~~~~~~G~~~~~~~a~----l~~-~~l~tl~~R 245 (378)
T TIGR01329 182 ----GADIVYHSATKFLAGHSDVMAGVLAVKGEEI-------AKKVYFLQNSTGSGLAPFDCW----LLL-RGIKTLAIR 245 (378)
T ss_pred ----CCcEEEEecceeccCCccceeEEEEeCcHHH-------HHHHHHHHHhcCCcCCHHHHH----HHH-ccCCCHHHH
Confidence 224999999998863 347799999865543 344444444333334444322 111 233445666
Q ss_pred HHHHHHHHHHHHHHHHhC-CC-ee-eCC---------------CCceEEEEEcCCCC-hHHHHHHHHHhcCeEEeCCCCc
Q 013521 351 IDYYKENAKIIVDAFQSL-GL-KV-NGG---------------KNAPYVWVQFPGSS-SWDVFAEILEKTHILTIPGSGF 411 (441)
Q Consensus 351 ~~~~~~~~~~l~~~L~~~-g~-~~-~~~---------------~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~pg~~f 411 (441)
.++..++...+.+.|+++ .+ ++ ++. ..|..+.+.+.+.. ..+++..| +..++.++-|...
T Consensus 246 ~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L-~~~~i~~s~G~~~ 324 (378)
T TIGR01329 246 IEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEAT-KLFSITVSFGSVN 324 (378)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhC-cCcccccCCCCCC
Confidence 777788888888888876 22 11 110 12346777774323 33555554 6668888877654
Q ss_pred C----C-----------------CCCCeEEEEeec
Q 013521 412 G----P-----------------GGNEHIRVSAFG 425 (441)
Q Consensus 412 ~----~-----------------~~~~~iRls~~~ 425 (441)
. + -.++.||||++.
T Consensus 325 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl 359 (378)
T TIGR01329 325 SLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI 359 (378)
T ss_pred ceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc
Confidence 2 0 125789999865
No 217
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=1.1e-19 Score=175.16 Aligned_cols=238 Identities=16% Similarity=0.148 Sum_probs=155.6
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhcccccccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLK 186 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~ 186 (441)
+.+| +.+...+|++++|++. ..+++++++|+++|+.+++.++++||+|+++.+.|.+-...+......+.
T Consensus 48 Y~R~-~~p~~~~le~~lA~le------g~~~~v~~~sG~aAi~~~l~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~--- 117 (364)
T PRK07269 48 YTRT-KNPTRAKLEETLAAIE------SADYALATSSGMSAIVLAFSVFPVGSKVVAVRDLYGGSFRWFNQQEKEGR--- 117 (364)
T ss_pred eeCC-CCccHHHHHHHHHHHh------CCCeEEEeCCHHHHHHHHHHHhCCCCEEEEecCCcCchHHHHHHHHhcCc---
Confidence 3445 3457889999999985 36799999999999998556789999999999999776554443321100
Q ss_pred ccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC
Q 013521 187 ETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR 266 (441)
Q Consensus 187 ~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~ 266 (441)
..+... .+.+ .+...+ .+++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 118 -----~~~~~~-~d~~-~l~~~i--~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~---~ 182 (364)
T PRK07269 118 -----FHFTYA-NTEE-ELIAAI--EEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQ---R 182 (364)
T ss_pred -----EEEEec-CCHH-HHHHhc--CcCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC---C
Confidence 122221 1111 111111 368999999999999999887 889999999999999999997632211 1
Q ss_pred cccccCCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHH
Q 013521 267 SIYEIPGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQ 345 (441)
Q Consensus 267 ~~~~~~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 345 (441)
++. . .-.+++.|++|.++.+| .=.|+++++++.+ .+++...+.......+++....+..-| +
T Consensus 183 pl~-~----gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l-------~~~~~~~~~~~G~~~s~~~a~l~~~~L-----~ 245 (364)
T PRK07269 183 PIE-L----GADIVLHSATKYLSGHNDVLAGVVVTNDLEL-------YEKLFYNLNTTGAVLSPFDSYLLMRGL-----K 245 (364)
T ss_pred chh-h----CCcEEEecCceeccCCCcccceEEEeCcHHH-------HHHHHHHHHHhCCCCCHHHHHHHHcCC-----C
Confidence 221 1 22389999999997323 1258888765443 344444443333445565544333333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CC-eeeCCCCceEEEEEcC
Q 013521 346 ALRTVIDYYKENAKIIVDAFQSL-GL-KVNGGKNAPYVWVQFP 386 (441)
Q Consensus 346 ~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~ 386 (441)
.+..+.++.+++.+.+.+.|+++ ++ ++.-|..|..+.+.+.
T Consensus 246 tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 246 TLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 45777788889999999999987 43 3432334445555554
No 218
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=5.7e-19 Score=173.88 Aligned_cols=344 Identities=12% Similarity=0.057 Sum_probs=206.0
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCcH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI-EGDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~~ 145 (441)
.++.++|+..|.. .+ ..+|.+.+++.+.+.+... ....+.+. +....+|+.+....+. ..+.++++++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~~~~~----~~~~~la~~l~~~~p~~~~~~~~f~~sGs 111 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTH--TAYQIVPY----ASYVTLAERINALAPIDGPAKTAFFTTGA 111 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccc--ccccccCC----hHHHHHHHHHHHhCCCCCCceEEEeCCcH
Confidence 3567888866632 22 3578899999999876421 11111122 2333444444332232 246899999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHh-ccccccc-cccCccceeEEeecCCCC-Cc----cC-CCCC---
Q 013521 146 SDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIV-GQAGKFL-KETGKYRNIVYMNCRPEN-NF----FP-DLST--- 211 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~-~~~~~~~~v~~v~~~~~~-~~----~~-~~~~--- 211 (441)
+|... + .........|+....+|++....+... +...... ........+..++..... +. .. .++.
T Consensus 112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~ 191 (421)
T PRK06777 112 EAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFK 191 (421)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHH
Confidence 99886 4 222334467888999999975544432 2110000 000000112222222110 00 00 0111
Q ss_pred ----CCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCC
Q 013521 212 ----TSRTDIIFFCSP-NNPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFS 285 (441)
Q Consensus 212 ----~~~~~~v~i~~p-~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 285 (441)
.+++.+|++ .| ++..|. ++|.+.+++|.++|++||+++|.||+|..|...+.+.+...++-.+| +.++|
T Consensus 192 ~~~~~~~iaavi~-Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pD----iv~~s 266 (421)
T PRK06777 192 ADIAPDQVAAILL-EPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPD----LITMA 266 (421)
T ss_pred hccCCCceEEEEE-CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCC----EEeee
Confidence 134556554 55 788885 68999999999999999999999999998766554333333332344 23799
Q ss_pred cccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 013521 286 KFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAF 365 (441)
Q Consensus 286 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 365 (441)
|.++ +|+|+||++++++++ +.+.........+.+++.+.++.+.|+... + +.+.++.+++.+++.+.|
T Consensus 267 K~l~-~G~pigav~~~~~i~--------~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~-~--~~l~~~~~~~g~~l~~~L 334 (421)
T PRK06777 267 KSLG-GGMPISAVVGRAEVM--------DAPAPGGLGGTYAGNPLAVAAALAVLDVIA-E--EKLCQRALILGAHLVEVL 334 (421)
T ss_pred hhhc-CCCceEEEEEcHHHH--------hccCCCCCCCCCCcCHHHHHHHHHHHHHHH-h--ccHHHHHHHHHHHHHHHH
Confidence 9998 999999999998773 333222233445578999999999996211 1 456677777778887777
Q ss_pred HhC----C-CeeeCCCCceEEEEEcC----CCChHHHHHHH---HHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHH
Q 013521 366 QSL----G-LKVNGGKNAPYVWVQFP----GSSSWDVFAEI---LEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYIS 431 (441)
Q Consensus 366 ~~~----g-~~~~~~~~~~~~~~~~~----~~~~~~~~~~l---l~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~ 431 (441)
+++ + +....+.+.++ .+.+. +..+.++...+ +.++||.+.|+..|+ +++||+. ..++++++
T Consensus 335 ~~l~~~~~~i~~vrg~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g----~~lr~~ppl~i~~~~i~ 409 (421)
T PRK06777 335 EKAKASCPAIVDIRARGSMV-AVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHG----NVIRFLYPLTIPDAQFS 409 (421)
T ss_pred HHHHHhCCCeEEecCceEEE-EEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCC----CEEEEeCCCCCCHHHHH
Confidence 764 2 22234444444 43332 11122333332 345699999987654 5899996 56899999
Q ss_pred HHHHHHHhhC
Q 013521 432 EACRRLKNFL 441 (441)
Q Consensus 432 ~~l~~l~~~l 441 (441)
+++++|.+++
T Consensus 410 ~~~~~l~~~l 419 (421)
T PRK06777 410 KALNILTRLL 419 (421)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 219
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.2e-18 Score=162.39 Aligned_cols=324 Identities=16% Similarity=0.168 Sum_probs=224.6
Q ss_pred CCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCC-CcEEEcCCcHHHHHH-HHHhcCCCCE
Q 013521 83 TQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEG-DEIFISDGAQSDISR-LQMLLGSNVT 160 (441)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~I~~t~G~~~al~~-l~~l~~~gd~ 160 (441)
+.+.++.++++|.+ +..++..+ .+..+-+.+.+.+..-++.+. +-++++++++.++.. +.++++|||+
T Consensus 13 P~~v~~~V~~am~~--------~~~~h~s~--~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdk 82 (383)
T COG0075 13 PVPVPPRVLLAMAR--------PMVGHRSP--DFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDK 82 (383)
T ss_pred CCCCCHHHHHHhcC--------CCCCCCCH--HHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCe
Confidence 34577888888877 44444433 345555555555555556664 556677777888987 8999999999
Q ss_pred EEEeCCCchh--hHhHHHHhccccccccccCccceeEEeecCCCCCccCC-----CCCCCCccEEEEcCCCCccccCCCH
Q 013521 161 VAVQDPSFPA--YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-----LSTTSRTDIIFFCSPNNPTGHAATW 233 (441)
Q Consensus 161 Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-----~~~~~~~~~v~i~~p~NPtG~~~~~ 233 (441)
|++...+.++ +.++++.+| .+++.+...+...+.++ +++.++.++|.+++...+||+..|
T Consensus 83 VLv~~nG~FG~R~~~ia~~~g------------~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp- 149 (383)
T COG0075 83 VLVVVNGKFGERFAEIAERYG------------AEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP- 149 (383)
T ss_pred EEEEeCChHHHHHHHHHHHhC------------CceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc-
Confidence 9999988877 467777787 58888887765444443 233567889999899999999999
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccccc------
Q 013521 234 QQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYS------ 307 (441)
Q Consensus 234 ~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~------ 307 (441)
+++|+++|++||.++|+|.+-+. ++.+..+- .++.++++++..|.++. .-.+|++..+++.+..
T Consensus 150 --l~~I~~~~k~~g~l~iVDaVsS~---Gg~~~~vd----~wgiDv~itgSQK~l~~-PPGla~v~~S~~a~e~~~~~~~ 219 (383)
T COG0075 150 --LKEIAKAAKEHGALLIVDAVSSL---GGEPLKVD----EWGIDVAITGSQKALGA-PPGLAFVAVSERALEAIEERKH 219 (383)
T ss_pred --HHHHHHHHHHcCCEEEEEecccC---CCcccchh----hcCccEEEecCchhccC-CCccceeEECHHHHHHHhcCCC
Confidence 89999999999999999998772 22233332 24566999999999974 3458898888876521
Q ss_pred --CCchhHHHHHHHHh--hhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC---CceE
Q 013521 308 --NGYPVIKDFNRIVC--TCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGK---NAPY 380 (441)
Q Consensus 308 --~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~ 380 (441)
...++.+....+.. ....+++.....+..++|+.-..+.++.+.++++++.+.+++.++.+|++....+ ....
T Consensus 220 ~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tv 299 (383)
T COG0075 220 PSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTV 299 (383)
T ss_pred CceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCce
Confidence 11222222222222 2233344444454555554322345799999999999999999999999887621 1234
Q ss_pred EEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe-e-cCHHHHHHHHHHHHhhC
Q 013521 381 VWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA-F-GHREYISEACRRLKNFL 441 (441)
Q Consensus 381 ~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~-~-~~~~~~~~~l~~l~~~l 441 (441)
..+.+| +.++.+....+++++|+.+.+|. ++.....+||+. + .+..++..++.+|..+|
T Consensus 300 ta~~~P~g~~~~~~~~~~~~~~g~~i~gg~--~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L 361 (383)
T COG0075 300 TAIKVPEGVDDKKVRRALLKEYGVEIAGGQ--GPLKGKIFRIGHMGNVRPEDVLAALAALEAAL 361 (383)
T ss_pred EEEECCCCCCcHHHHHHHHHhCCEEecccc--cccCccEEEEecCccCCHHHHHHHHHHHHHHH
Confidence 556666 44555555678888899998874 455678999995 3 37889999999887753
No 220
>PRK05968 hypothetical protein; Provisional
Probab=99.85 E-value=6.6e-19 Score=171.64 Aligned_cols=280 Identities=16% Similarity=0.118 Sum_probs=174.9
Q ss_pred cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHh----HHHHhcccccccccc
Q 013521 114 QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYID----TSVIVGQAGKFLKET 188 (441)
Q Consensus 114 ~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~~ 188 (441)
+-..+|++++|++. |.+ ..+++++| +.|+.+ +..++++||+|+++.+.|.+... .+...|
T Consensus 63 p~~~~le~~lA~l~----g~~-~av~~~sG-~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G--------- 127 (389)
T PRK05968 63 PTVRAFEEMLAKLE----GAE-DARGFASG-MAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMG--------- 127 (389)
T ss_pred hhHHHHHHHHHHHh----CCC-cEEEECCH-HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcC---------
Confidence 34678999999986 543 44555555 568876 67788999999999999987543 334445
Q ss_pred CccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcc
Q 013521 189 GKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSI 268 (441)
Q Consensus 189 ~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~ 268 (441)
++++.++.++.+.+.. ..+++++|++++|+||+ ++..++++|+++|++||+++|+|++|....... + +
T Consensus 128 ---~~v~~vd~~d~~~l~~---~i~~tklV~ie~pt~~~---~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-p--~ 195 (389)
T PRK05968 128 ---VEVDYVDGRDEEAVAK---ALPGAKLLYLESPTSWV---FELQDVAALAALAKRHGVVTMIDNSWASPVFQR-P--I 195 (389)
T ss_pred ---ceEEEeCCCCHHHHHH---hcccCCEEEEECCCCCC---CcHHHHHHHHHHHHHcCCEEEEECCCcchhccC-c--h
Confidence 4777776542111111 12578999998766665 555779999999999999999999997644322 2 2
Q ss_pred cccCCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHHHh-hhcCCCcHHHHHHHHHhcCCCcHHH
Q 013521 269 YEIPGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRIVC-TCFNGASNIVQAGGLACLSPDGFQA 346 (441)
Q Consensus 269 ~~~~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~ 346 (441)
.. +..+++.|+||.++.+| ++.|+++++++++ +++..... ......+++.+..+...|+ .
T Consensus 196 -~~----g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~--------~~l~~~~~~~~g~~~~~~~A~~~l~~L~-----t 257 (389)
T PRK05968 196 -TL----GVDLVIHSASKYLGGHSDTVAGVVAGSKEHI--------ARINAEAYPYLGAKLSPFEAWLLLRGLR-----T 257 (389)
T ss_pred -hc----CCcEEEeeccccccCCCCeEEEEEEECHHHH--------HHHHHHHHHhCCCCCChHHHHHHHcccC-----c
Confidence 11 22488889999998644 5789998887763 44443222 2223355555444333333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCee-eCC-----------CCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcC
Q 013521 347 LRTVIDYYKENAKIIVDAFQSL-GLKV-NGG-----------KNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFG 412 (441)
Q Consensus 347 ~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~-----------~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~ 412 (441)
+..+.++.+++.+.+.+.|+++ ++.. ..| ..|..+.+++++ ....+++..| +..++.++-|..+.
T Consensus 258 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L-~~~~~~~s~G~~~s 336 (389)
T PRK05968 258 LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADAL-KLFRLGVSWGGHES 336 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhC-CccEEecCCCCCCc
Confidence 4666667777788888999887 5533 212 113467777763 2333444444 44566666665443
Q ss_pred ---C------------------CCCCeEEEEeec-C-HHHHHHHHHHHHh
Q 013521 413 ---P------------------GGNEHIRVSAFG-H-REYISEACRRLKN 439 (441)
Q Consensus 413 ---~------------------~~~~~iRls~~~-~-~~~~~~~l~~l~~ 439 (441)
+ -.++.||+|++- + ++-++.+-++|.+
T Consensus 337 lv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 337 LVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred eeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 0 115789999854 3 3334444444443
No 221
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=6e-19 Score=171.97 Aligned_cols=280 Identities=16% Similarity=0.182 Sum_probs=178.4
Q ss_pred cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhH----HHHhccccccccccC
Q 013521 114 QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDT----SVIVGQAGKFLKETG 189 (441)
Q Consensus 114 ~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~~~ 189 (441)
+-..++++.+|++. +.+ +.+++++| +.++.++..++++||+|+++.|.|++.... +...|
T Consensus 54 p~~~~le~~lA~l~----g~~-~~v~~~sG-~~ai~~~l~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G---------- 117 (390)
T PRK08064 54 PTREALEDIIAELE----GGT-KGFAFASG-MAAISTAFLLLSKGDHVLISEDVYGGTYRMITEVLSRFG---------- 117 (390)
T ss_pred hhHHHHHHHHHHHh----CCC-CeEEECCH-HHHHHHHHHHhCCCCEEEEccCccchHHHHHHHHHHHcC----------
Confidence 34678899999986 655 56777777 457776445789999999999999864433 33355
Q ss_pred ccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccc
Q 013521 190 KYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY 269 (441)
Q Consensus 190 ~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~ 269 (441)
.+++.++.++.+.+...+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+... .++
T Consensus 118 --~~v~~v~~~d~~~l~~~l--~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---~~~- 186 (390)
T PRK08064 118 --IEHTFVDMTNLEEVAQNI--KPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ---KPL- 186 (390)
T ss_pred --CEEEEECCCCHHHHHHhc--CCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc---Cch-
Confidence 478888764211111111 367899999999999999988 788889999999999999998854321 111
Q ss_pred ccCCCcceeEEEecCCcccCC-ccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHH
Q 013521 270 EIPGAREVAIEISSFSKFAGF-TGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALR 348 (441)
Q Consensus 270 ~~~~~~~~~i~i~S~SK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 348 (441)
.+ +.++++.|+||.++. +|...|++++.++.+ .+.+...+..... ....+.+.. .+ .+.+.+.
T Consensus 187 ~~----g~Divv~S~tK~~~G~~~~laG~~v~~~~~~-------~~~l~~~~~~~g~--~~~~~~a~l-~~--~gl~tl~ 250 (390)
T PRK08064 187 DL----GADVVLHSATKFLAGHSDVLAGLAVVKDEEL-------AQKLYFLQNSFGA--VLGVQDCWL-VL--RGLKTLH 250 (390)
T ss_pred hh----CCcEEEeecceeccCCccceeEEEEeCCHHH-------HHHHHHHHHhcCC--CCCHHHHHH-HH--cccCcHH
Confidence 22 235889999999852 345668877754332 4555544443222 222333333 22 3444566
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CC-eeeCC----------------CCceEEEEEcCCCChHHHHHHHHHhcCe---EEeC
Q 013521 349 TVIDYYKENAKIIVDAFQSL-GL-KVNGG----------------KNAPYVWVQFPGSSSWDVFAEILEKTHI---LTIP 407 (441)
Q Consensus 349 ~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~v~p 407 (441)
.+.++..++...+.+.|+++ .+ +++-| ..|..+.+++.+ .+.+..+++..++ .++-
T Consensus 251 ~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~---~~~~~~f~~~l~l~~~~~s~ 327 (390)
T PRK08064 251 VRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS---EEAVRQFVSHVKLPVFAVSL 327 (390)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC---HHHHHHHHHhCCcceEcccC
Confidence 77788888889999999876 22 11111 124467777753 3345666777677 4555
Q ss_pred CCCc------------CC---------CCCCeEEEEeec--CHHHHHHHHHHHHh
Q 013521 408 GSGF------------GP---------GGNEHIRVSAFG--HREYISEACRRLKN 439 (441)
Q Consensus 408 g~~f------------~~---------~~~~~iRls~~~--~~~~~~~~l~~l~~ 439 (441)
|..+ .. -.++.||+|++- .++.++.+.++|++
T Consensus 328 G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 328 GAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred CCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 5211 10 125789999754 45556666666654
No 222
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.85 E-value=5.2e-19 Score=174.01 Aligned_cols=164 Identities=17% Similarity=0.214 Sum_probs=121.3
Q ss_pred CCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH----HHHhcccc
Q 013521 108 KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT----SVIVGQAG 182 (441)
Q Consensus 108 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~ 182 (441)
.+| +.+-..+|++.+|+++ +. +..++++++++++.. +..++++||+|++..+.|++.... +...|
T Consensus 52 sr~-~~p~~~~le~~lA~l~----g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G--- 121 (418)
T TIGR01326 52 SRL-MNPTTDVLEQRIAALE----GG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG--- 121 (418)
T ss_pred ECC-CChhHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcC---
Confidence 344 3445688999999986 43 567888888888886 677889999999999999775433 34455
Q ss_pred ccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC
Q 013521 183 KFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD 262 (441)
Q Consensus 183 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~ 262 (441)
.+++.++.++.+.+...+ .+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+....
T Consensus 122 ---------~~v~~v~~~d~~~l~~~l--~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~- 186 (418)
T TIGR01326 122 ---------IEVRFVDPDDPEEFEKAI--DENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL- 186 (418)
T ss_pred ---------cEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc-
Confidence 477777753111111111 357899999999999999998 88999999999999999999974211
Q ss_pred CCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 263 PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
..++ ..+.++++.|+||.++.+|+|+||++++++
T Consensus 187 --~~~l-----~~g~Divv~S~sK~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 187 --CRPI-----DHGADIVVHSATKYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred --CCch-----hcCCeEEEECccccccCCccceEEEEEecc
Confidence 1111 123469999999999988999999999653
No 223
>PLN02624 ornithine-delta-aminotransferase
Probab=99.85 E-value=2.2e-19 Score=178.98 Aligned_cols=340 Identities=11% Similarity=0.073 Sum_probs=200.0
Q ss_pred CCCCeEEeCCCCCCC---CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDTTQ---PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~---~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|.... ..+|.+.+++.+.+.++.. ....+ ......+|.+.++++. + .+.+++++++++
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~--~~~~~-~~~~~~~la~~L~~~~----~--~~~~~f~~SGse 143 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTL--SSRAF-YNDKFPEFAEYLTSMF----G--YDMVLPMNTGAE 143 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCC--ccccc-CCHHHHHHHHHHHhhc----C--CCeEEEeCChHH
Confidence 356788887764322 2489999999999986431 11122 2334566666666653 3 368888999989
Q ss_pred HHHH-HH--Hhc---C----CCC-EEEEeCCCchhhHhHHHHhcccc-ccccccCccceeEEeecCCCCCccCCCC-CCC
Q 013521 147 DISR-LQ--MLL---G----SNV-TVAVQDPSFPAYIDTSVIVGQAG-KFLKETGKYRNIVYMNCRPENNFFPDLS-TTS 213 (441)
Q Consensus 147 al~~-l~--~l~---~----~gd-~Vlv~~p~y~~~~~~~~~~g~~~-~~~~~~~~~~~v~~v~~~~~~~~~~~~~-~~~ 213 (441)
|... +. ... + +++ .|+...-+|++....+....... ...........+..++..+.+.+...++ ...
T Consensus 144 A~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 223 (474)
T PLN02624 144 GVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGD 223 (474)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCC
Confidence 8875 42 211 1 133 57777788888643333222110 0000000001223333321111110011 124
Q ss_pred CccEEEEcCCCCccccCCCHH-HHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcc
Q 013521 214 RTDIIFFCSPNNPTGHAATWQ-QLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTG 292 (441)
Q Consensus 214 ~~~~v~i~~p~NPtG~~~~~~-~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G 292 (441)
++++|++..++|++|.+++.+ .+++|.++|++||+++|.||+|..+...+.........-.+| +.++||.+|.++
T Consensus 224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pD----iv~lsK~lggG~ 299 (474)
T PLN02624 224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPD----VVILGKALGGGV 299 (474)
T ss_pred CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCC----EEEecccccCCC
Confidence 677888878899999998777 599999999999999999999987654443221111111223 334799999666
Q ss_pred ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 013521 293 VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL---- 368 (441)
Q Consensus 293 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 368 (441)
+++|+++++++++ ..+.......+.+.+++.+.++.+.++.... ..+.+...++.+.+.+.|+++
T Consensus 300 ~pigav~~~~~i~--------~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~---~~l~~~~~~~~~~l~~~L~~l~~~~ 368 (474)
T PLN02624 300 IPVSAVLADKDVM--------LCIKPGEHGSTFGGNPLASAVAMAALQVVQD---EKLAERSAKLGQELRDQLQKIQKQF 368 (474)
T ss_pred CcceeeeecHHHH--------hHhccCCcCCCCCCCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999987763 3333222233345788888888888862111 123344444555555555443
Q ss_pred C--CeeeCCCCceEEEEEcCC-----CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHh
Q 013521 369 G--LKVNGGKNAPYVWVQFPG-----SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKN 439 (441)
Q Consensus 369 g--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~ 439 (441)
. +....+ .|.++.+.+.. ....++...++ ++||.+.|+ +.++|||+. ..+++++++++++|.+
T Consensus 369 ~~~i~~vrg-~G~~~~i~l~~~~~~~~~a~~~~~~L~-e~GV~v~p~------~~~~lR~~p~l~~t~e~id~~l~~L~~ 440 (474)
T PLN02624 369 PKLIKEVRG-RGLLNAVVLNSPKLGPVSAYDVCLKLK-ERGLLAKPT------HDTIIRLAPPLSISEDELQECSKALSD 440 (474)
T ss_pred CCceEEEEe-eEEEEEEEecCCCcChHHHHHHHHHHH-hCCeEEecC------CCCEEEEECCccCCHHHHHHHHHHHHH
Confidence 1 222222 35555555532 12345666654 569999885 257899984 6689999999999987
Q ss_pred hC
Q 013521 440 FL 441 (441)
Q Consensus 440 ~l 441 (441)
++
T Consensus 441 ~l 442 (474)
T PLN02624 441 VL 442 (474)
T ss_pred HH
Confidence 63
No 224
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.85 E-value=2.9e-19 Score=175.81 Aligned_cols=339 Identities=11% Similarity=0.089 Sum_probs=203.0
Q ss_pred CCCeEEeCCCCCCCC---CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDTTQP---IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~---~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
+++++|+..+-.... .+|.+.+++.+.+..... ....+ ...-..++.+.+++++ + .+.+++++++++|
T Consensus 36 g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~--~~~~~-~~~~~~~l~~~l~~~~----~--~~~~~~~~SGs~A 106 (401)
T TIGR01885 36 GKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTL--SSRAF-YNDVFGEFAEYVTKLF----G--YDKVLPMNTGAEA 106 (401)
T ss_pred CCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccc--ccccc-CCHHHHHHHHHHHhhc----C--CCEEEEeCccHHH
Confidence 467888887643333 479999999998876431 11112 2234456666666653 4 3688888888888
Q ss_pred HHH-HHHh----------cCCCCEEEEeCCCchhh-HhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-CCC
Q 013521 148 ISR-LQML----------LGSNVTVAVQDPSFPAY-IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-TSR 214 (441)
Q Consensus 148 l~~-l~~l----------~~~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-~~~ 214 (441)
... +... ....+.|+...-+|++. .......+..............+..++..+-..+...+.. .++
T Consensus 107 ~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 107 VETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPN 186 (401)
T ss_pred HHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhcCCC
Confidence 775 4322 12246788888888864 3333332211000000000012333333211111100111 145
Q ss_pred ccEEEEcCCCCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC-CcceeEEEecCCcccCCcc
Q 013521 215 TDIIFFCSPNNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG-AREVAIEISSFSKFAGFTG 292 (441)
Q Consensus 215 ~~~v~i~~p~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~~~~G 292 (441)
..+|++..+++++|.+.+ .+.+++|.++|++||+++|+||+|..+...+.+.+. ...+ .+| ++ ++||.++.++
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~-~~~~~~~d--i~--~~gK~l~~g~ 261 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCV-DHENVKPD--IV--LLGKALSGGV 261 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHH-hhcCCCCC--EE--EeeccccCCC
Confidence 667666566999999886 447999999999999999999999776554433222 2222 233 22 4789998555
Q ss_pred ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 013521 293 VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKV 372 (441)
Q Consensus 293 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 372 (441)
+|+|+++++++++ +.+.........+.+++++.++.+.|+.... +.+.++.++..+++.+.|++++..+
T Consensus 262 ~~ig~v~~~~~i~--------~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~---~~l~~~~~~~~~~~~~~L~~l~~~~ 330 (401)
T TIGR01885 262 YPVSAVLADDDVM--------LTIKPGEHGSTYGGNPLACAVAVAALEVLEE---EKLAENAEKLGEIFRDQLKKLPKPI 330 (401)
T ss_pred CCcEEEEEcHHHH--------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhccCCc
Confidence 9999999988763 3332211222334578888888888862211 2344566677888888888774222
Q ss_pred e--CCCCceEEEEEcCCC----ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 373 N--GGKNAPYVWVQFPGS----SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 373 ~--~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
. ....|.+..+.++.. ...++...+. ++||.+.|+. ++.+||+. ..+++++++++++|++++
T Consensus 331 ~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~~------~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 331 ITEVRGRGLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPTH------GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred eeEEeecCeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEecC------CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 1 112455544445421 3456666665 5599998742 56899995 568999999999998864
No 225
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.85 E-value=1.1e-18 Score=169.83 Aligned_cols=305 Identities=15% Similarity=0.151 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHh-cCCCCEEEEeC
Q 013521 88 DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQML-LGSNVTVAVQD 165 (441)
Q Consensus 88 ~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l-~~~gd~Vlv~~ 165 (441)
+...+++.+.+.. +. -| |..++++++++++.+.++. +++++|+|+++|+.+ +..+ +++||+|+++.
T Consensus 11 ~~~~~~~~~~l~~-----~~-~~----g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~ 78 (375)
T PRK11706 11 GTELDYIQQAMSS-----GK-LC----GDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPS 78 (375)
T ss_pred HHHHHHHHHHHHc-----CC-cc----CCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECC
Confidence 4446677776652 11 12 2334666666666554454 699999999999987 4544 68999999999
Q ss_pred CCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC---C--CCCccEEEEcCCCCccccCCCHHHHHHHH
Q 013521 166 PSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS---T--TSRTDIIFFCSPNNPTGHAATWQQLKKLV 240 (441)
Q Consensus 166 p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~ 240 (441)
|+|+++...+...| .+++.++++++ ++..+++ + .+++++|+++ ||||...+ +++|.
T Consensus 79 ~t~~~~~~~~~~~G------------~~~v~~d~d~~-~~~~d~~~le~~i~~~tk~i~~~---~~~G~~~~---~~~i~ 139 (375)
T PRK11706 79 YTFVSTANAFVLRG------------AKIVFVDIRPD-TMNIDETLIEAAITPKTRAIVPV---HYAGVACE---MDTIM 139 (375)
T ss_pred CCcHHHHHHHHHcC------------CEEEEEecCCC-cCCcCHHHHHHhcCCCCeEEEEe---CCCCCccC---HHHHH
Confidence 99999999999888 58999998865 3444432 2 3578998875 46998877 78999
Q ss_pred HHHHHcCcEEEEcccccccc-cCCCCCcccccCCCcceeEEEecCC--cccCCccceeEEEEeeccccccCCchhHHHHH
Q 013521 241 EFAKANGSIIVYDSAYAAYI-TDPSPRSIYEIPGAREVAIEISSFS--KFAGFTGVRLGWTVVPEELRYSNGYPVIKDFN 317 (441)
Q Consensus 241 ~~a~~~~~~ii~De~~~~~~-~~~~~~~~~~~~~~~~~~i~i~S~S--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~ 317 (441)
++|++||++||+|++|+.+. +++. ++..+. .+.+.||+ |.++ +|.+.+++..++++ .+++.
T Consensus 140 ~la~~~~i~vIeD~a~a~g~~~~~~--~~g~~~-----~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~--------~~~~~ 203 (375)
T PRK11706 140 ALAKKHNLFVVEDAAQGVMSTYKGR--ALGTIG-----HIGCFSFHETKNYT-AGEGGALLINDPAL--------IERAE 203 (375)
T ss_pred HHHHHcCCEEEEECccccccccCCe--eeecCc-----CEEEEeCCCCcccc-ccCCeEEEECCHHH--------HHHHH
Confidence 99999999999999998655 2322 222221 13344444 9997 78887787766665 33333
Q ss_pred HHHhhh-----------------cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC----Ceee-CC
Q 013521 318 RIVCTC-----------------FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG----LKVN-GG 375 (441)
Q Consensus 318 ~~~~~~-----------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~ 375 (441)
.++... ..+.+...+....++.. ...+.+++..++.+++.+.+.+.|+++. +.+. .+
T Consensus 204 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~-~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~ 282 (375)
T PRK11706 204 IIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLW-AQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIP 282 (375)
T ss_pred HHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCC
Confidence 333211 01122211111111111 1234456666666677777788887652 3322 12
Q ss_pred CC----ceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCC----C---cCC-----C--------CCCeEEEEee--cCHH
Q 013521 376 KN----APYVWVQFPG-SSSWDVFAEILEKTHILTIPGS----G---FGP-----G--------GNEHIRVSAF--GHRE 428 (441)
Q Consensus 376 ~~----~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~----~---f~~-----~--------~~~~iRls~~--~~~~ 428 (441)
.+ ..++|+.++. .+..++.+.|. ++||.+.... . |.. . ....+-|-+. -+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~ 361 (375)
T PRK11706 283 DDCKHNAHMFYIKLRDLEDRSALINFLK-EAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDV 361 (375)
T ss_pred CCCceeeEEEEEEECCcCCHHHHHHHHH-HCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHH
Confidence 12 2356777753 34456666555 4599876331 1 000 0 0233444443 2689
Q ss_pred HHHHHHHHHHhhC
Q 013521 429 YISEACRRLKNFL 441 (441)
Q Consensus 429 ~~~~~l~~l~~~l 441 (441)
+++..++.|++++
T Consensus 362 ~~~~i~~~i~~~~ 374 (375)
T PRK11706 362 EQRTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998753
No 226
>PLN02509 cystathionine beta-lyase
Probab=99.85 E-value=6.7e-19 Score=173.19 Aligned_cols=219 Identities=21% Similarity=0.260 Sum_probs=146.7
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHH----Hhcccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSV----IVGQAG 182 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~ 182 (441)
.+.|+.. |.+ .++++.+++.+..+ .++.++++++++++.++..++++||+|+++.|.|+++...+. ..|
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G--- 196 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK--ADRAFCFTSGMAALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSG--- 196 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHHHhCCCCEEEEcCCchhhHHHHHHHHHHHCC---
Confidence 3467654 543 57777777665333 456677777788888766788999999999999998764443 345
Q ss_pred ccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccc
Q 013521 183 KFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI 260 (441)
Q Consensus 183 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~ 260 (441)
++++.++..+. .++++ .+++++|++++|+||||.+.+ +++|+++|++||+++|+|++|....
T Consensus 197 ---------~~v~~vd~~d~----e~l~~ai~~~TklV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~ 260 (464)
T PLN02509 197 ---------VVVKRVNTTNL----DEVAAAIGPQTKLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_pred ---------eEEEEeCCCCH----HHHHHhCCcCCeEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCccccc
Confidence 46666654321 12222 367899999999999998744 9999999999999999999987432
Q ss_pred cCCCCCcccccCCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhc
Q 013521 261 TDPSPRSIYEIPGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACL 339 (441)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 339 (441)
.. .++ .. +.++++.|++|.++.+| .-.|++++.++.+ .+.+...+.......+++... ..+
T Consensus 261 ~~---~pl-~~----gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l-------~~~~~~~~~~~g~~l~p~~A~---l~l 322 (464)
T PLN02509 261 LS---RPL-EL----GADIVMHSATKFIAGHSDVMAGVLAVKGEKL-------AKEVYFLQNSEGSGLAPFDCW---LCL 322 (464)
T ss_pred cC---Chh-hc----CCcEEEecCcccccCCCccceeEEEeccHHH-------HHHHHHHHHhcCCCcCHHHHH---HHH
Confidence 21 111 11 23489999999987423 3468888755543 233333333322333444322 222
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 340 SPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
.+.+.+..+.++.+++++.+.+.|+++
T Consensus 323 --r~L~tL~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 323 --RGIKTMALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred --hhhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 345666788889999999999999987
No 227
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=4.9e-18 Score=167.80 Aligned_cols=342 Identities=12% Similarity=0.076 Sum_probs=201.0
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|- ..+ ..+|.+.+++.+.+.+... ....| ...+.+.++|+.|.+..+..-+.+++++++++
T Consensus 39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~----~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsE 112 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIH--YTPIY----GFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSD 112 (443)
T ss_pred CCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccC--ccccc----cCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHH
Confidence 456788887663 222 3678999999998875321 11112 22334455666554433333368999999999
Q ss_pred HHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHh-ccccccccccCccceeEEeecCCCCC--c----------cCC--
Q 013521 147 DISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIV-GQAGKFLKETGKYRNIVYMNCRPENN--F----------FPD-- 208 (441)
Q Consensus 147 al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~v~~v~~~~~~~--~----------~~~-- 208 (441)
|+.. + .........|+....+|++....+... +....+...-.....+..++...... + ..+
T Consensus 113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK08360 113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI 192 (443)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence 9986 4 222344567888888998864333322 21100000000001233333321100 0 000
Q ss_pred ---CCC---CCCccEEEEcCC-CCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEE
Q 013521 209 ---LST---TSRTDIIFFCSP-NNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIE 280 (441)
Q Consensus 209 ---~~~---~~~~~~v~i~~p-~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 280 (441)
++. .+++++|++ .| +||+|.+++ .+.+++|.++|++||+++|+||+|..|...+...+...+.-.+|
T Consensus 193 ~~~l~~~~~~~~iAAvi~-eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pD---- 267 (443)
T PRK08360 193 KEKFEGEVYAEGVAALFA-EPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPD---- 267 (443)
T ss_pred HHHHHhccCCCCeEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCC----
Confidence 111 246777666 57 799999887 55799999999999999999999998765543222222222334
Q ss_pred EecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Q 013521 281 ISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKI 360 (441)
Q Consensus 281 i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 360 (441)
+.++||.++ +|+|+||+++++++. +.+.........+.+++.+.++.+.++.-.. +...++.+++-++
T Consensus 268 iitlsK~l~-~G~pigav~~~~~i~--------~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~ 335 (443)
T PRK08360 268 IITLGKPLG-GGLPISATIGRAEIM--------DSLPPLAHAFTLSGNPVASAAALAVIEEIEE---KNLLKRAEKLGNY 335 (443)
T ss_pred EEEeccccc-CCceeEEEEEcHHHH--------hhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHH
Confidence 236899998 999999999988773 3343222233445678888888888863111 2234455555555
Q ss_pred HHHHHHhC----CCeeeCCCCceEEEEEcCCC---------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eec
Q 013521 361 IVDAFQSL----GLKVNGGKNAPYVWVQFPGS---------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFG 425 (441)
Q Consensus 361 l~~~L~~~----g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~ 425 (441)
+.+.|+++ ++.......|.++-+++... ....+...++ ++||.+.+.. .+.+|++ +..
T Consensus 336 l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~lr~~P~l~~ 408 (443)
T PRK08360 336 TKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVTFFS------GNVLRIQPPLTI 408 (443)
T ss_pred HHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEeecC------CCEEEEeCCCCC
Confidence 55555443 32111112455665655311 1123445555 4599986531 3679995 567
Q ss_pred CHHHHHHHHHHHHhhC
Q 013521 426 HREYISEACRRLKNFL 441 (441)
Q Consensus 426 ~~~~~~~~l~~l~~~l 441 (441)
+++++++++++|.+++
T Consensus 409 t~~~id~~~~~l~~~l 424 (443)
T PRK08360 409 EKEVLDEGLDILEEAI 424 (443)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 228
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=1.1e-18 Score=169.36 Aligned_cols=216 Identities=19% Similarity=0.232 Sum_probs=143.3
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHH-HhccccccccccCcc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSV-IVGQAGKFLKETGKY 191 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~ 191 (441)
.+-..+|++.+|++. +.+ ..+++.+| +.++.++..++++||+|+++.|+|++....+. .+...|
T Consensus 49 ~p~~~~Le~~lA~l~----g~~-~~~~~~sG-~aai~~~~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G--------- 113 (377)
T PRK07671 49 NPTRAALEELIAVLE----GGH-AGFAFGSG-MAAITAVMMLFSSGDHVILTDDVYGGTYRVMTKVLNRFG--------- 113 (377)
T ss_pred ChHHHHHHHHHHHHh----CCC-ceEEeCCH-HHHHHHHHHHhCCCCEEEECCCccchHHHHHHHHHhcCC---------
Confidence 445788999999985 543 45666666 56777766788999999999999985544332 222111
Q ss_pred ceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc
Q 013521 192 RNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI 271 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~ 271 (441)
++++.++..+...+...+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .| + ..
T Consensus 114 ~~v~~v~~~d~~~l~~ai--~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~-~p--~-~~ 184 (377)
T PRK07671 114 IEHTFVDTSNLEEVEEAI--RPNTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ-SP--I-SL 184 (377)
T ss_pred eEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC-Ch--h-hh
Confidence 477777643211111111 368899999999999999987 888899999999999999999743222 12 2 12
Q ss_pred CCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHH
Q 013521 272 PGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTV 350 (441)
Q Consensus 272 ~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 350 (441)
+..+++.|+||.++.++ .-.|+++++++.+ .+++...+.......++..... ++ .+.+.+..+
T Consensus 185 ----g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l-------~~~~~~~~~~~g~~~~~~~a~l---~~--~~l~tl~~R 248 (377)
T PRK07671 185 ----GADIVLHSATKYLGGHSDVVAGLVVVNSPEL-------AEDLHFVQNSTGGILGPQDSWL---LL--RGLKTLGIR 248 (377)
T ss_pred ----CCeEEEecCcccccCCccceeEEEEeCcHHH-------HHHHHHHHHhhcCCCCHHHHHH---HH--cCcChHHHH
Confidence 22499999999997433 3457777755433 4555555554434344443222 22 223445667
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 013521 351 IDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 351 ~~~~~~~~~~l~~~L~~~ 368 (441)
.++.+++.+.+.+.|+++
T Consensus 249 ~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNH 266 (377)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 888889999999999987
No 229
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=1e-18 Score=169.07 Aligned_cols=207 Identities=16% Similarity=0.222 Sum_probs=145.1
Q ss_pred cHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHH----HHhccccccccccCc
Q 013521 116 NMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTS----VIVGQAGKFLKETGK 190 (441)
Q Consensus 116 ~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~~ 190 (441)
...|++++|++. + .+++++++|+++|+.. +..++++||+|++++|.|++....+ ...|
T Consensus 52 ~~~lE~~lA~l~----g--~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~g----------- 114 (377)
T TIGR01324 52 HFALQDAMCELE----G--GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMG----------- 114 (377)
T ss_pred HHHHHHHHHHHh----C--CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcC-----------
Confidence 368999999985 4 4689999999999997 6788999999999999998765543 2334
Q ss_pred cceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcc
Q 013521 191 YRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSI 268 (441)
Q Consensus 191 ~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~ 268 (441)
+++..++...+ .++++ .+++|+|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+..... .++
T Consensus 115 -i~v~~~d~~~~----e~l~~~i~~~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~---~pl 183 (377)
T TIGR01324 115 -VDITYYDPLIG----EDIATLIQPNTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF---KPL 183 (377)
T ss_pred -cEEEEECCCCH----HHHHHhcCCCceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc---Ccc
Confidence 36666543221 12222 368999999999999987765 999999999999999999999842221 111
Q ss_pred cccCCCcceeEEEecCCcccCCc-cceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHH
Q 013521 269 YEIPGAREVAIEISSFSKFAGFT-GVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQAL 347 (441)
Q Consensus 269 ~~~~~~~~~~i~i~S~SK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 347 (441)
. .+..+++.|++|.++.+ +...|+++++++.+ +.+...........++... ..++ .+.+.+
T Consensus 184 -~----~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~--------~~l~~~~~~~G~~l~p~~a---~~~~--rgl~tl 245 (377)
T TIGR01324 184 -E----HGVDISIQAGTKYLVGHSDIMIGTVVANARTW--------DQLREHSYLMGQMVDADDA---YTTL--RGLRTL 245 (377)
T ss_pred -c----cCceEEEecCceeccCCCCceEEEEEeCHHHH--------HHHHHHHHHhCCCCCHHHH---HHHH--hhhhhH
Confidence 1 23359999999999633 46789998877652 3333333333333444332 2222 344556
Q ss_pred HHHHHHHHHHHHHHHHHHHhC
Q 013521 348 RTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 348 ~~~~~~~~~~~~~l~~~L~~~ 368 (441)
..+.++.+++...+.+.|+++
T Consensus 246 ~~R~~~~~~~a~~la~~L~~~ 266 (377)
T TIGR01324 246 GVRLKQHQESSLAIAKWLSEQ 266 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 667788888888899999887
No 230
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.84 E-value=1.5e-18 Score=169.89 Aligned_cols=336 Identities=11% Similarity=0.106 Sum_probs=202.3
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|- ..+ ..+|.+.+++.+.+.+... ++.. -..+....+++.|....+. .+.+++++++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~------~~~~-~~~~~~~~la~~L~~~~~~-~~~v~f~~sGse 109 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWH------TSNV-FYSAPPLKLAEELVTASRF-AEKVFLCNSGTE 109 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccc------cccc-cCCHHHHHHHHHHHhhCCC-CCEEEEcCchHH
Confidence 356788887663 222 3678899999998875321 1111 1123344555555432221 268999999999
Q ss_pred HHHH-HH--Hhc----C--C-CCEEEEeCCCchhhHhHHHHh-cccc---ccccccCccceeEEeecCCCCCccCCCCCC
Q 013521 147 DISR-LQ--MLL----G--S-NVTVAVQDPSFPAYIDTSVIV-GQAG---KFLKETGKYRNIVYMNCRPENNFFPDLSTT 212 (441)
Q Consensus 147 al~~-l~--~l~----~--~-gd~Vlv~~p~y~~~~~~~~~~-g~~~---~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~ 212 (441)
|... +. ... + + ..+|+....+|++....+... +... .+.+.. ..+..++..+.+.+...+ .
T Consensus 110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~---~~~~~~~~~d~~~l~~~~-~- 184 (408)
T PRK04612 110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLP---GGFRYVDFNDVEALEAAM-A- 184 (408)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCC---CCceEcCCCCHHHHHHhh-C-
Confidence 9885 42 222 1 1 246888999999875443332 2110 000000 012222221100010001 1
Q ss_pred CCccEEEEcCCCCccccCCC--HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCC
Q 013521 213 SRTDIIFFCSPNNPTGHAAT--WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGF 290 (441)
Q Consensus 213 ~~~~~v~i~~p~NPtG~~~~--~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~ 290 (441)
++..+.++..|.+++|-+++ .+.+++|.++|++||+++|+||+|..+...+.. .... ..+.+..+.||||.++
T Consensus 185 ~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~--~a~~--~~~~~pdi~t~~K~l~- 259 (408)
T PRK04612 185 GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTL--FAHW--QEQVTPDIVTLAKALG- 259 (408)
T ss_pred CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCch--hhhh--hcCCCCCEEEEcchhc-
Confidence 23455677799888887765 678999999999999999999999976554422 1111 1234567889999998
Q ss_pred ccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 013521 291 TGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-- 368 (441)
Q Consensus 291 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 368 (441)
+|+|+||+++++++. +.+.........+.+++.+.++.+.|+.-. + +++.++.+++.+++.+.|+++
T Consensus 260 ~G~piga~~~~~~~~--------~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~-~--~~l~~~~~~~g~~l~~~l~~l~~ 328 (408)
T PRK04612 260 GGFPIGAMLAGPKVA--------ETMQFGAHGTTFGGNPLAAAVARVALRKLA-S--PQIAANVARQSAALRAGLEALNA 328 (408)
T ss_pred CCCceEEEEECHHHH--------hhhcCCCcCCCCCCCHHHHHHHHHHHHHHH-h--ccHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999987763 333322223344578899998888886211 1 345566666667777766654
Q ss_pred --CCeeeCCCCceEEEEEcCC--C-ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 369 --GLKVNGGKNAPYVWVQFPG--S-SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 369 --g~~~~~~~~~~~~~~~~~~--~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
++......-|.++-+.+.. . ...++... +.++||.+.|. +.+.+|+. +..+++++++++++|.+++
T Consensus 329 ~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~-l~~~Gvlv~~~------g~~~lRl~Ppl~it~eeid~~l~~l~~~l 401 (408)
T PRK04612 329 EFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDL-AAEHGLLLLQA------GPDVLRFVPALNLTDAELADGLARLRLAL 401 (408)
T ss_pred hCCCeeeeeccceEEEEEecCchhhHHHHHHHH-HHHCCeEEeeC------CCCEEEEcCCccCCHHHHHHHHHHHHHHH
Confidence 2221111246666676642 1 12344454 44569999763 34789998 4568999999999998764
No 231
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=1.1e-18 Score=171.38 Aligned_cols=220 Identities=17% Similarity=0.235 Sum_probs=145.8
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH----HHHhccccccccc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT----SVIVGQAGKFLKE 187 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~ 187 (441)
.+-...|.+.+|++. + .+..++++++++|+.. +..++++||+|+++.+.|++.... +...|
T Consensus 63 ~p~~~~Le~~lA~le----g--~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~G-------- 128 (431)
T PRK08248 63 NPTTDVFEKRIAALE----G--GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLG-------- 128 (431)
T ss_pred CchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCC--------
Confidence 345677888888885 4 3577788888889886 778899999999999999775443 33455
Q ss_pred cCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCc
Q 013521 188 TGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRS 267 (441)
Q Consensus 188 ~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~ 267 (441)
++++.++..+.+.+...+ .+++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..- .. ..+
T Consensus 129 ----v~v~~vd~~d~e~l~~ai--~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~-~~--~~p 196 (431)
T PRK08248 129 ----ITVKFVDPSDPENFEAAI--TDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP-YL--LRP 196 (431)
T ss_pred ----EEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc-cc--CCh
Confidence 578888764211211111 257899999999999999999 779999999999999999998621 11 112
Q ss_pred ccccCCCcceeEEEecCCcccCCccceeEEEEeecc-ccccC--C--------c--------h-------hHHHHHHHHh
Q 013521 268 IYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE-LRYSN--G--------Y--------P-------VIKDFNRIVC 321 (441)
Q Consensus 268 ~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~-~~~~~--~--------~--------~-------~~~~~~~~~~ 321 (441)
+ . .+.++++.|++|.+|.+|.++|++++... ..... . . . ..+.......
T Consensus 197 l-~----~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (431)
T PRK08248 197 I-E----HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLR 271 (431)
T ss_pred h-H----cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHH
Confidence 2 1 23458999999999999999998887432 11000 0 0 0 0001111112
Q ss_pred hhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 322 TCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 322 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
......+++. + ++...+.+-+..+.++.+++...+.+.|+++
T Consensus 272 ~~G~~l~p~~---a--~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~ 313 (431)
T PRK08248 272 DLGAALSPFN---S--FLLLQGLETLHLRMERHSENALAVAKFLEEH 313 (431)
T ss_pred hcCCCCCHHH---H--HHHhcCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 2222233332 1 1222445556777788888999999999987
No 232
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.83 E-value=8.6e-19 Score=173.17 Aligned_cols=341 Identities=11% Similarity=0.068 Sum_probs=202.2
Q ss_pred CCCCeEEeCCCCCCC---CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDTTQ---PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~---~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|.+.. ..+|.+.+++.+.+.+. ...|.+..+..+|.+.+++.+ . ..+.+++++++++
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~-----~~~~~~~~~~~~la~~L~~~~----~-~~~~v~~~~sGse 117 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG-----LSFGAPTELEVELAELVIELV----P-SIEMVRMVNSGTE 117 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC-----CcCCCCCHHHHHHHHHHHHhC----C-CCCEEEEecCHHH
Confidence 456899998875332 47899999999998752 123445556666777777653 2 3578999999999
Q ss_pred HHHH-HHHh--cCCCCEEEEeCCCchhhHhHHHHhcccccc----ccccCcc----ceeEEeecCCCCCccCCCCC-CCC
Q 013521 147 DISR-LQML--LGSNVTVAVQDPSFPAYIDTSVIVGQAGKF----LKETGKY----RNIVYMNCRPENNFFPDLST-TSR 214 (441)
Q Consensus 147 al~~-l~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----~~~~~~~----~~v~~v~~~~~~~~~~~~~~-~~~ 214 (441)
|+.. +... ...++.|+..+++|++....+......+.. ....... .....++..+.+.+...+.. ..+
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~ 197 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDE 197 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCc
Confidence 9986 4322 334678999999999976443332100000 0000000 00111111100000000111 235
Q ss_pred ccEEEEcCCCCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccc
Q 013521 215 TDIIFFCSPNNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGV 293 (441)
Q Consensus 215 ~~~v~i~~p~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~ 293 (441)
+.+|++..-+.-+|.+.+ .+.+++|.++|++||+++|.||+|..+..+. ......+.-.+| +.+|||.++ .|+
T Consensus 198 ~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~~~~~~~~~~pD----i~~~gK~l~-~G~ 271 (426)
T PRK00062 198 IAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-GGAQGYYGVTPD----LTTLGKIIG-GGL 271 (426)
T ss_pred EEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-ccHHHHhCCCcc----hHhhhhHhh-CCC
Confidence 666666522444898876 8889999999999999999999998763322 111111221234 468999998 899
Q ss_pred eeEEEEeeccccccCCchhHHHHH---HHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhCC
Q 013521 294 RLGWTVVPEELRYSNGYPVIKDFN---RIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSLG 369 (441)
Q Consensus 294 r~G~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g 369 (441)
++|++++++++. +.+. ........+.+++.+.++.+.|+.... +..++.++..+..++.+.+.+.+++
T Consensus 272 p~ga~~~~~~i~--------~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 343 (426)
T PRK00062 272 PVGAFGGRREIM--------EQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAG 343 (426)
T ss_pred cceeeeEHHHHH--------HhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999988763 3332 111223345788888888888862111 2334444444444555555444555
Q ss_pred CeeeCCCCceEEEEEcCCC-----------C---hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHH
Q 013521 370 LKVNGGKNAPYVWVQFPGS-----------S---SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACR 435 (441)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~ 435 (441)
+.......|.++-+.+... + ...+...++ ++||.+.|.. .+.+++++..++++++++++
T Consensus 344 ~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~~ei~~~~~ 416 (426)
T PRK00062 344 IPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ------FEAGFVSAAHTDEDIEKTLE 416 (426)
T ss_pred CceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC------cCceeeeccCCHHHHHHHHH
Confidence 5442222455555544210 1 134555555 4599998742 23467887779999999999
Q ss_pred HHHhhC
Q 013521 436 RLKNFL 441 (441)
Q Consensus 436 ~l~~~l 441 (441)
+|.+++
T Consensus 417 ~l~~~l 422 (426)
T PRK00062 417 AARKAF 422 (426)
T ss_pred HHHHHH
Confidence 998753
No 233
>PRK05939 hypothetical protein; Provisional
Probab=99.83 E-value=2.5e-18 Score=167.43 Aligned_cols=216 Identities=16% Similarity=0.142 Sum_probs=139.5
Q ss_pred HHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH---HHHhccccccccccCccc
Q 013521 117 MALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT---SVIVGQAGKFLKETGKYR 192 (441)
Q Consensus 117 ~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~ 192 (441)
..|.+.+|++. +.. ..+++++| ++|+.. +..++++||+|++.++.|++.... +...| +
T Consensus 50 ~~lE~~la~le----g~~-~~v~~ssG-~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G------------~ 111 (397)
T PRK05939 50 AALEAKITKME----GGV-GTVCFATG-MAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLG------------V 111 (397)
T ss_pred HHHHHHHHHHh----CCC-eEEEeCCH-HHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcC------------C
Confidence 48889999875 432 35555555 788886 677899999999999999865443 33445 4
Q ss_pred eeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccC
Q 013521 193 NIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIP 272 (441)
Q Consensus 193 ~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~ 272 (441)
+++.++..+.+.+...+ .+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.... .+...
T Consensus 112 ~v~~v~~~d~e~l~~~l--~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~------~~~~~- 179 (397)
T PRK05939 112 EVTMVDATDVQNVAAAI--RPNTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPW------LFRPK- 179 (397)
T ss_pred EEEEECCCCHHHHHHhC--CCCCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCccccc------ccCcc-
Confidence 78887764211211111 368999999999999998855 9999999999999999999986311 11001
Q ss_pred CCcceeEEEecCCcccCCccceeEEEEeecccccc-CCchh-------------HHHHHH-HHhhhcCCCcHHHHHHHHH
Q 013521 273 GAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYS-NGYPV-------------IKDFNR-IVCTCFNGASNIVQAGGLA 337 (441)
Q Consensus 273 ~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~-~~~~~-------------~~~~~~-~~~~~~~~~~~~~~~a~~~ 337 (441)
..+..+++.|+||.++..|.++|++++++..... ..... ...+.. .........++... .
T Consensus 180 -~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a----~ 254 (397)
T PRK05939 180 -DVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAA----H 254 (397)
T ss_pred -ccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHH----H
Confidence 1234699999999999889999998875332100 00000 001110 11112222333331 1
Q ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 338 CLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 338 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
++. .+.+.+..+.++..++...+.+.|+++
T Consensus 255 l~~-rgl~tl~~R~~~~~~na~~la~~L~~~ 284 (397)
T PRK05939 255 RIA-IGAETLALRVDRSCSNALALAQFLEAH 284 (397)
T ss_pred HHH-cCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 222 445555666677777999999999987
No 234
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.83 E-value=3.5e-18 Score=165.55 Aligned_cols=278 Identities=19% Similarity=0.193 Sum_probs=180.9
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHh-cCCCCEEEEeCCCchhhHhHHHHhccccccccccCc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQML-LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGK 190 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~ 190 (441)
.....++++.+++++ +. +++++++|+++++.. +..+ +++||+|+++.++|.+....+...|
T Consensus 17 ~~~~~~~~~~la~~~----~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g----------- 79 (352)
T cd00616 17 GPKVREFEKAFAEYL----GV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLG----------- 79 (352)
T ss_pred CHHHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcC-----------
Confidence 456889999999996 43 578888888999887 5556 5899999999999999988888888
Q ss_pred cceeEEeecCCCCCccCCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC
Q 013521 191 YRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSP 265 (441)
Q Consensus 191 ~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~ 265 (441)
.+++.++++++ .+..+++. .+++++|+++ ||+|...+ +++|.++|+++|+++|+|++++...... .
T Consensus 80 -~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~-~ 150 (352)
T cd00616 80 -ATPVFVDIDPD-TYNIDPELIEAAITPRTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYK-G 150 (352)
T ss_pred -CeEEEEecCCC-cCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeEC-C
Confidence 58888888652 33333221 3678888875 46999887 7888889999999999999998432211 1
Q ss_pred CcccccCCCcceeEEEecCC--cccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhc---------------CCCc
Q 013521 266 RSIYEIPGAREVAIEISSFS--KFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCF---------------NGAS 328 (441)
Q Consensus 266 ~~~~~~~~~~~~~i~i~S~S--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~ 328 (441)
..+... . .+.+.||+ |.++ +.+.|+++++++.+ .+.+........ ...+
T Consensus 151 ~~~~~~---~--d~~~~S~~~~K~~~--~~~gg~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (352)
T cd00616 151 RKVGTF---G--DAGAFSFHPTKNLT--TGEGGAVVTNDEEL-------AERARLLRNHGRDRDRFKYEHEILGYNYRLS 216 (352)
T ss_pred EEcccC---c--ceeEEcCCCCCCCc--ccCceEEEECCHHH-------HHHHHHHHHcCCCCCCCccccceeeeccCcC
Confidence 111111 1 26677766 9884 33568888875332 233332221110 1122
Q ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCC-----ceEEEEEcC---CCChHHHHHHHHH
Q 013521 329 NIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKN-----APYVWVQFP---GSSSWDVFAEILE 399 (441)
Q Consensus 329 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~ll~ 399 (441)
.+....+.. ....+++..++.+++.+++.+.|.++ |+++..+.. ...+.+.++ +.+..++.+.|.
T Consensus 217 ~~~aa~~~~-----~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~- 290 (352)
T cd00616 217 EIQAAIGLA-----QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALK- 290 (352)
T ss_pred HHHHHHHHH-----HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHH-
Confidence 222221221 12345667777888899999999886 777654322 234555665 345566666654
Q ss_pred hcCeEEeCCCCcCCC----------------C-------CCeEEEEe--ecCHHHHHHHHHHHH
Q 013521 400 KTHILTIPGSGFGPG----------------G-------NEHIRVSA--FGHREYISEACRRLK 438 (441)
Q Consensus 400 ~~gi~v~pg~~f~~~----------------~-------~~~iRls~--~~~~~~~~~~l~~l~ 438 (441)
++||.+... +.+. . .+.||+++ ..++++++.+++.|+
T Consensus 291 ~~gI~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 291 EAGIETRVH--YPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HCCCCeeee--cCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 559966532 1110 0 26799997 458999999998874
No 235
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=5.7e-18 Score=164.93 Aligned_cols=303 Identities=17% Similarity=0.148 Sum_probs=186.2
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHh-cCCCCEEEEe
Q 013521 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQML-LGSNVTVAVQ 164 (441)
Q Consensus 87 ~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l-~~~gd~Vlv~ 164 (441)
.+...+++.+.+.. +...+ .....+|++++|+++ +. +++++|+|+++|+.+ +..+ +++||+|+++
T Consensus 13 ~~~e~~~~~~~l~~-----~~~~~--g~~~~~le~~la~~~----g~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~ 79 (379)
T PRK11658 13 GDEELAAVKEVLRS-----GWITT--GPKNQALEQAFCQLT----GN--QHAIAVSSATAGMHITLMALGIGPGDEVITP 79 (379)
T ss_pred CHHHHHHHHHHHHc-----CCccC--CHhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEEC
Confidence 35557777777752 22223 346799999999997 54 468889999999998 5666 7899999999
Q ss_pred CCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC---C--CCCccEEEEcCCCCccccCCCHHHHHHH
Q 013521 165 DPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS---T--TSRTDIIFFCSPNNPTGHAATWQQLKKL 239 (441)
Q Consensus 165 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i 239 (441)
.|+|+++...+...| .+++.++++.+ ++..|.+ + .+++++|+ |.||+|...+ +++|
T Consensus 80 ~~~~~~~~~~~~~~G------------~~~v~vd~~~~-~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i 140 (379)
T PRK11658 80 SLTWVSTLNMIVLLG------------ATPVMVDVDRD-TLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAI 140 (379)
T ss_pred CCcHHHHHHHHHHcC------------CEEEEEecCCC-cCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHH
Confidence 999999988888888 58999998764 3333422 2 36788876 5667999887 7889
Q ss_pred HHHHHHcCcEEEEccccccc-ccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHH
Q 013521 240 VEFAKANGSIIVYDSAYAAY-ITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNR 318 (441)
Q Consensus 240 ~~~a~~~~~~ii~De~~~~~-~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~ 318 (441)
.++|++||++||+|++++.. .+.+. .+... + +.+.||++.-.+++.+.|+++++++.+ .+++..
T Consensus 141 ~~~a~~~gi~vi~D~a~a~g~~~~~~--~~g~~----g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~-------~~~~~~ 205 (379)
T PRK11658 141 RAIGERYGIPVIEDAAHAVGTYYKGR--HIGAR----G--TAIFSFHAIKNITCAEGGLVVTDDDEL-------ADRLRS 205 (379)
T ss_pred HHHHHHcCCeEEEECCCccCCeECCe--ecCCC----C--CEEEeCCCCCcCcccCceEEEECCHHH-------HHHHHH
Confidence 99999999999999999842 22221 12111 1 135566543334566789988764433 233333
Q ss_pred HHhhhcC--------------------C--CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eeCC
Q 013521 319 IVCTCFN--------------------G--ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLK-VNGG 375 (441)
Q Consensus 319 ~~~~~~~--------------------~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~ 375 (441)
.+..... + .......|++.... .+.+++..++-++..+.+.+.|+++++. +..+
T Consensus 206 ~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~q---l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~ 282 (379)
T PRK11658 206 LKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQ---LAKLEALNARRREIAARYLQALADLPFQPLSLP 282 (379)
T ss_pred HHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCC
Confidence 2211100 0 00111122333322 3445667777777778888888876432 2222
Q ss_pred CC----ceE-EEEEcC----CCChHHHHHHHHHhcCeEEeCCC----C---cCC---C---------CCCeEEEEee--c
Q 013521 376 KN----APY-VWVQFP----GSSSWDVFAEILEKTHILTIPGS----G---FGP---G---------GNEHIRVSAF--G 425 (441)
Q Consensus 376 ~~----~~~-~~~~~~----~~~~~~~~~~ll~~~gi~v~pg~----~---f~~---~---------~~~~iRls~~--~ 425 (441)
.. .++ ..+.++ +.+..++.+.|. ++||.+.+.. . |.. . ....|.|-+. .
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~-~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l 361 (379)
T PRK11658 283 AWPHQHAWHLFIIRVDEERCGISRDALMEALK-ERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDM 361 (379)
T ss_pred CCCCceeEEEEEEEECCccccCCHHHHHHHHH-HCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCC
Confidence 11 222 223443 234556666655 5598765321 1 100 0 0233544443 3
Q ss_pred CHHHHHHHHHHHHhh
Q 013521 426 HREYISEACRRLKNF 440 (441)
Q Consensus 426 ~~~~~~~~l~~l~~~ 440 (441)
++++++..++.|+++
T Consensus 362 ~~~~~~~i~~~i~~~ 376 (379)
T PRK11658 362 TDADVDRVITALQQI 376 (379)
T ss_pred CHHHHHHHHHHHHHH
Confidence 789999999999875
No 236
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=1.2e-17 Score=164.23 Aligned_cols=338 Identities=13% Similarity=0.094 Sum_probs=198.0
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~ 145 (441)
.++.++|+..|-. .+ ..+|.+.+++.+.+.+... ....+.+. +....+|+.+.+..+-. .+.++++++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~----~~~~~la~~l~~~~p~~~~~~v~f~~SGs 111 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH--TCHQVVPY----ENYVRLAERLNALVPGDFAKKTIFVTTGA 111 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccC--cccCccCC----HHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 3567888876632 22 3678899999998875421 11111122 23334454443322322 26899999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHh-cc----ccccccccCccceeEEeecCCCC-CccCC-----CC-
Q 013521 146 SDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIV-GQ----AGKFLKETGKYRNIVYMNCRPEN-NFFPD-----LS- 210 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~----~~~~~~~~~~~~~v~~v~~~~~~-~~~~~-----~~- 210 (441)
+|... + .........|+....+|++........ +. +..+.+.. ..+..+|..... +...+ ++
T Consensus 112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~l~~ 188 (425)
T PRK07495 112 EAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMM---PDVYHVPFPVELHGVSVEQSLAALDK 188 (425)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCC---CCeEEecCCcccccccHHHHHHHHHH
Confidence 99886 4 222334567998999999875433222 21 00111100 133444443210 11000 01
Q ss_pred ------CCCCccEEEEcCC--CCccc-cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEE
Q 013521 211 ------TTSRTDIIFFCSP--NNPTG-HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEI 281 (441)
Q Consensus 211 ------~~~~~~~v~i~~p--~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i 281 (441)
...++.+|++ .| +| +| ..+|.+.+++|.++|++||+++|+||++..|...+........ +.+..+
T Consensus 189 ~~~~~~~~~~iaavi~-EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~----gv~pDi 262 (425)
T PRK07495 189 LFKADVDPQRVAAIII-EPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHH----EVAADL 262 (425)
T ss_pred HHHhccCCCceEEEEE-CCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeeccc----CCCCCE
Confidence 1135666665 55 56 78 5589999999999999999999999999977554432112111 233457
Q ss_pred ecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Q 013521 282 SSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKII 361 (441)
Q Consensus 282 ~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 361 (441)
.+|||.++ +|+++|++++++++. +.+........++.+++.+.++.+.++--.. ..+.++.++..+++
T Consensus 263 ~tlsK~l~-~G~pigav~~~~~i~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l 330 (425)
T PRK07495 263 TTMAKGLA-GGFPLAAVTGRAEIM--------DAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE---EDLCERANQLGNRL 330 (425)
T ss_pred Eeehhhhc-CCccceEEEEcHHHH--------hccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHH
Confidence 89999998 999999999998874 2222212234445788888866666641100 12333444444444
Q ss_pred HHHHHhC----C-C-eeeCCCCceEEEEEcCCCC--------hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eec
Q 013521 362 VDAFQSL----G-L-KVNGGKNAPYVWVQFPGSS--------SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFG 425 (441)
Q Consensus 362 ~~~L~~~----g-~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~ 425 (441)
.+.|+++ + + .+.. .|.++|+++.... ...+...++ ++|+.+.+... ..+.|||. +..
T Consensus 331 ~~~L~~l~~~~~~i~~vrG--~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g~----~~~~~r~~Ppl~i 403 (425)
T PRK07495 331 KQRLASLRETVPEIADIRG--PGFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILLTCGV----HGNVIRFLAPITI 403 (425)
T ss_pred HHHHHHHHhhCCCeeeeec--CceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeecCC----CCCEEEEeCCCcc
Confidence 4444332 2 1 2222 4889999985211 123444444 56999876321 24679998 566
Q ss_pred CHHHHHHHHHHHHhhC
Q 013521 426 HREYISEACRRLKNFL 441 (441)
Q Consensus 426 ~~~~~~~~l~~l~~~l 441 (441)
+++++++++++|.+++
T Consensus 404 t~~~id~~~~~l~~~l 419 (425)
T PRK07495 404 QDDVFAEALDILEASI 419 (425)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8999999999998764
No 237
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.82 E-value=4.5e-18 Score=179.81 Aligned_cols=343 Identities=13% Similarity=0.101 Sum_probs=212.5
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCC----CcCcHHHHHHHHHHHhhhCCCCCC--cEEEcCCcHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGA----EQGNMALRTAIADKFYKDMGIEGD--EIFISDGAQS 146 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~--~I~~t~G~~~ 146 (441)
+++.|+.+....+++..+.+++.+........++ ..|.. ..-..+.|+.+|+++ +++++ .|++|+|+|+
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~l----ga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYF----NAPPSDYACVFTSGATA 108 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHh----CCCccceEEEEeCChHH
Confidence 3688888876554556666666666554321122 12211 223567788888886 77665 5899999999
Q ss_pred HHHHH-HHh-cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCC--------CCCccC---CCCC--
Q 013521 147 DISRL-QML-LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRP--------ENNFFP---DLST-- 211 (441)
Q Consensus 147 al~~l-~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~--------~~~~~~---~~~~-- 211 (441)
+++++ ..+ +++||+|++..-.|++...+...+..+| +++..++++. .+.... +++.
T Consensus 109 alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G---------~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~ 179 (805)
T PLN02724 109 ALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKG---------AAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRN 179 (805)
T ss_pred HHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcC---------CeEEeccchhccccccccccccccchhhhhhhh
Confidence 99985 444 6899999998888888776554443333 3777777652 111111 1111
Q ss_pred ----------CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHc-----CcEEEEcccccccccCCCCCcccccCCCcc
Q 013521 212 ----------TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKAN-----GSIIVYDSAYAAYITDPSPRSIYEIPGARE 276 (441)
Q Consensus 212 ----------~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~-----~~~ii~De~~~~~~~~~~~~~~~~~~~~~~ 276 (441)
.++++++.+++-+|-||.++|.+.++++.+.++.+ ++++++|.+++--. .+..+..+ +
T Consensus 180 ~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~---~piDv~~~----~ 252 (805)
T PLN02724 180 TSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT---SPPDLSRY----P 252 (805)
T ss_pred hhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC---CCCChhhc----C
Confidence 13567888888899999999966554444433322 36899999887311 13334333 3
Q ss_pred eeEEEecCCcccCCccceeEEEEeeccccccCCchhH------------------H-HHHHHHhhhcCCCcHHHHHHHHH
Q 013521 277 VAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVI------------------K-DFNRIVCTCFNGASNIVQAGGLA 337 (441)
Q Consensus 277 ~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~~~~a~~~ 337 (441)
..+++.|++|++| ....+|+++++++.+..-.+... . .-.++...+.+..+.++..+++.
T Consensus 253 ~Dfl~~S~HK~~G-gP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~ 331 (805)
T PLN02724 253 ADFVVVSFYKIFG-YPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK 331 (805)
T ss_pred CCEEEEecceecc-CCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH
Confidence 3599999999997 23348999888765321000000 0 00111121222222233333444
Q ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-------CCeeeCCC--------CceEEEEEcCCCC----hHHHHHHHH
Q 013521 338 CLSPDGFQALRTVIDYYKENAKIIVDAFQSL-------GLKVNGGK--------NAPYVWVQFPGSS----SWDVFAEIL 398 (441)
Q Consensus 338 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~--------~~~~~~~~~~~~~----~~~~~~~ll 398 (441)
.+.+.+ +++..++.++..+++.+.|.++ ++.++++. .+..+.+.+.+.+ ....+.+++
T Consensus 332 ~l~~ig---~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~ 408 (805)
T PLN02724 332 LLNRLT---ISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLA 408 (805)
T ss_pred HHHHhC---hHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHH
Confidence 443323 4677788888888999998876 36666532 3456767765433 234467777
Q ss_pred HhcCeEEeCCCCcCCC---------------------------------CCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 399 EKTHILTIPGSGFGPG---------------------------------GNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 399 ~~~gi~v~pg~~f~~~---------------------------------~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
.++||.++.|..+.+. ..+.||+|+ +++.+|++.+++.|++.
T Consensus 409 ~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 409 SLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS 485 (805)
T ss_pred HhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence 8889999999877521 137899997 56899999999999874
No 238
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.82 E-value=4e-18 Score=159.87 Aligned_cols=205 Identities=20% Similarity=0.244 Sum_probs=159.4
Q ss_pred CCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCC-C-CCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 70 PDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKG-Y-KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~-~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
.+.+.+.|+.+.. .|.++.|+++|.+.+..+...+. . ..|....+..+.|+.+|+++ +.++.+|++|+|+|++
T Consensus 40 ~~~~~vyld~~at-~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI----nAd~~dIiFts~ATEs 114 (428)
T KOG1549|consen 40 HGTRPVYLDNQAT-GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI----NADPSDIVFTSGATES 114 (428)
T ss_pred CCCccEEEecCcC-CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh----CCCCCcEEEeCCchHH
Confidence 3456788887764 35789999999998876642222 2 23334456788999999996 8999999999999999
Q ss_pred HHH-HHHh-cCCCC----EEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCcc
Q 013521 148 ISR-LQML-LGSNV----TVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTD 216 (441)
Q Consensus 148 l~~-l~~l-~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~ 216 (441)
+++ +..+ ..++| .|++..-.|+.....++.+..+| .+++++|+..++. .++++ .++|+
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g---------~~Vt~lpv~~~~~--~d~~~~~~~i~~~T~ 183 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEG---------LEVTYLPVEDSGL--VDISKLREAIRSKTR 183 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcC---------eEEEEeccCcccc--ccHHHHHHhcCCCce
Confidence 998 5554 34566 89999999999988888887655 4899999984332 33222 47999
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
++.|.+.+|-+|+++| +++|+.+|+++++.+++|.+++- +..+..+..+. ..++..|.+|++|.|| +|
T Consensus 184 lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav---G~i~vDV~eln----~D~~s~s~HK~ygp~~--iG 251 (428)
T KOG1549|consen 184 LVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV---GKIPVDVQELN----ADFLSISAHKIYGPPG--IG 251 (428)
T ss_pred EEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc---CCccccHHHcC----chheeeecccccCCCc--ce
Confidence 9999999999999999 89999999999999999999882 22245555552 3488999999999888 99
Q ss_pred EEEeec
Q 013521 297 WTVVPE 302 (441)
Q Consensus 297 ~l~~~~ 302 (441)
++++++
T Consensus 252 aLYvr~ 257 (428)
T KOG1549|consen 252 ALYVRR 257 (428)
T ss_pred EEEEcc
Confidence 999886
No 239
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.82 E-value=5.6e-18 Score=164.33 Aligned_cols=214 Identities=17% Similarity=0.155 Sum_probs=138.7
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHh-ccccccccccCccce
Q 013521 115 GNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIV-GQAGKFLKETGKYRN 193 (441)
Q Consensus 115 g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~ 193 (441)
-...|++.+|++. +. ...+++++| +.++.+++.+++|||+|+++.|.|++....+... ...| ++
T Consensus 51 ~~~~Le~~la~l~----g~-~~al~~~SG-~~Al~~~l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~g---------i~ 115 (380)
T PRK06176 51 TRFALEELIADLE----GG-VKGFAFASG-LAGIHAVFSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNG---------LS 115 (380)
T ss_pred hHHHHHHHHHHHh----CC-CCEEEECCH-HHHHHHHHHHcCCCCEEEEcCCChhHHHHHHHHHHHhcC---------eE
Confidence 4688899999885 43 345666666 5588776678899999999999998765444321 1111 46
Q ss_pred eEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC
Q 013521 194 IVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG 273 (441)
Q Consensus 194 v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~ 273 (441)
++.++..+.+.+... ..+++++|++++|+||||.+++ +++|+++|++||+++|+|++|+...... | + ..
T Consensus 116 v~~vd~~d~e~l~~a--i~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~-p--~-~~-- 184 (380)
T PRK06176 116 CTIIDTSDLSQIKKA--IKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN-P--L-LL-- 184 (380)
T ss_pred EEEcCCCCHHHHHHh--cCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC-c--c-cc--
Confidence 666654321111111 1367999999999999999998 8899999999999999999998533221 2 2 11
Q ss_pred CcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHH
Q 013521 274 AREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVID 352 (441)
Q Consensus 274 ~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 352 (441)
+..+++.|++|.++.+| .-.|++++.++.+ .+++...+.......++.....+. .+.+.+..+.+
T Consensus 185 --gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~-------~~~~~~~~~~~G~~~~~~~~~l~~-----~gl~tl~~R~~ 250 (380)
T PRK06176 185 --GADIVVHSGTKYLGGHSDVVAGLVTTNNEAL-------AQEIAFFQNAIGGVLGPQDSWLLQ-----RGIKTLGLRME 250 (380)
T ss_pred --CCCEEEecCceeccCCccceeeEEEecHHHH-------HHHHHHHHHHhcCCCCHHHHHHHH-----hccCcHHHHHH
Confidence 23489999999997554 3467777754433 344444444333333433322111 23333455666
Q ss_pred HHHHHHHHHHHHHHhC
Q 013521 353 YYKENAKIIVDAFQSL 368 (441)
Q Consensus 353 ~~~~~~~~l~~~L~~~ 368 (441)
+.+++...+.+.|+++
T Consensus 251 ~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 251 AHQKNALCVAEFLEKH 266 (380)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 6677888888888876
No 240
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=3e-17 Score=162.81 Aligned_cols=341 Identities=14% Similarity=0.096 Sum_probs=198.6
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|-. .+ ..+|.+.+++.+.+.+..... ...| ......+|.+.++++ .+-..+.+++++++++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~-~~~~-~~~~~~~la~~L~~~----~~~~~~~v~f~~SGse 114 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGP-SGVI-YYESILKLAEELAEI----TPGGLDCFFFSNSGAE 114 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcc-cccc-CCHHHHHHHHHHHHh----CCCCCCEEEEeCcHHH
Confidence 3567888877732 22 367899999999987643111 1112 222334455555554 2323468999888888
Q ss_pred HHHH-HH--HhcCCCCEEEEeCCCchhhHhHHHHh-cccc----ccccccCccceeEEeecCCCCC-------------c
Q 013521 147 DISR-LQ--MLLGSNVTVAVQDPSFPAYIDTSVIV-GQAG----KFLKETGKYRNIVYMNCRPENN-------------F 205 (441)
Q Consensus 147 al~~-l~--~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~----~~~~~~~~~~~v~~v~~~~~~~-------------~ 205 (441)
|... +. ........|+...-+|++........ +... .+.+.. ..+..+|...... .
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (433)
T PRK08117 115 AIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLL---GSVYQAPYPYCDRCPKGEDPEVCFLEC 191 (433)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCC---CCcEEeCCCccccccccCchhHHHHHH
Confidence 8875 42 22333467888888998864433222 2110 000000 1233333321100 0
Q ss_pred cCCCC-------CCCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcc
Q 013521 206 FPDLS-------TTSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGARE 276 (441)
Q Consensus 206 ~~~~~-------~~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~ 276 (441)
..+++ ...++.+| |..| +...|.+ .+.+.+++|.++|++||+++|+||+|..|...+.......+.-.+|
T Consensus 192 ~~~l~~~~~~~~~~~~~aav-i~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pD 270 (433)
T PRK08117 192 LRDLESLFKHQVTPEEVAAV-IIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPD 270 (433)
T ss_pred HHHHHHHHHhccCCCcEEEE-EECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCC
Confidence 00011 11345454 4566 5556766 5799999999999999999999999998655443221122221233
Q ss_pred eeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 013521 277 VAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKE 356 (441)
Q Consensus 277 ~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 356 (441)
+.||||.+| +|+++|+++++++++ +.+.......+.+.+++++.++.+.++.... +...++.++
T Consensus 271 ----i~t~sK~lg-~G~pigav~~~~~i~--------~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~---~~l~~~~~~ 334 (433)
T PRK08117 271 ----IMTIAKGIA-SGLPLSAVVASKELM--------EQWPLGSHGTTFGGNPVACAAALATLEVIKE---EKLLDNANE 334 (433)
T ss_pred ----Eeehhhhcc-CCCcceeEEEcHHHH--------hhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHH
Confidence 469999998 999999999988773 3332222233345688888888888862111 233444555
Q ss_pred HHHHHHHHHHhC----CCeeeCCCCceEEEEEcCCC------C-hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--e
Q 013521 357 NAKIIVDAFQSL----GLKVNGGKNAPYVWVQFPGS------S-SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--A 423 (441)
Q Consensus 357 ~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~------~-~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~ 423 (441)
+.+++.+.|+++ ++.......|.++++.+... . ...+...++ ++||.+.+.. . ..+++|++ +
T Consensus 335 ~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g---~-~~~~lRl~p~~ 409 (433)
T PRK08117 335 MGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCL-EKGLLFYLCG---N-AGNVLRMIPPL 409 (433)
T ss_pred HHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHH-HCCCEEeecC---C-CCCEEEEeCCc
Confidence 555555555543 32222223466777777311 1 123444444 5699987632 1 24689999 4
Q ss_pred ecCHHHHHHHHHHHHhhC
Q 013521 424 FGHREYISEACRRLKNFL 441 (441)
Q Consensus 424 ~~~~~~~~~~l~~l~~~l 441 (441)
..+++++++++++|.+++
T Consensus 410 ~~t~~~i~~~~~~l~~~l 427 (433)
T PRK08117 410 TVTKEEIDEGLDILDEAL 427 (433)
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 669999999999998763
No 241
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.81 E-value=6.5e-18 Score=163.17 Aligned_cols=314 Identities=14% Similarity=0.163 Sum_probs=194.0
Q ss_pred CCCCcHHHHHHHHHHHhhccCCCCCCCCCCC-------cCcHHHHHHHHHHHhhhCCC-CCCcEEEcCC-cHHHHHH-HH
Q 013521 83 TQPIPDIITSAMAEHAFALSTVKGYKGYGAE-------QGNMALRTAIADKFYKDMGI-EGDEIFISDG-AQSDISR-LQ 152 (441)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~-------~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G-~~~al~~-l~ 152 (441)
+.+.|+.+.+++.+.+..+. ..+...|... .-..+.|+.+++++ +. ++++|++|+| +|++++. +.
T Consensus 7 p~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~----~~~~~~~vvf~~gs~T~a~~~~~~ 81 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELL----NIPDNYKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEEcCCchHHHHHHHH
Confidence 45678999999999886544 2333333322 23456677777775 66 5678999988 9999998 67
Q ss_pred HhcC---CCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCc-c-CC---CCCCCCccEEEEcCCC
Q 013521 153 MLLG---SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF-F-PD---LSTTSRTDIIFFCSPN 224 (441)
Q Consensus 153 ~l~~---~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~-~-~~---~~~~~~~~~v~i~~p~ 224 (441)
.++. +||.|++ .|-.......++..| .+++.++.+.++++ . ++ .+..+++++|.+++..
T Consensus 82 ~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~ 148 (355)
T cd00611 82 NLLGDKGTADYVVT-GAWSAKAAKEAKRYG------------GVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNE 148 (355)
T ss_pred hcCCCCCeEEEEEC-CHHHHHHHHHHHhcC------------CCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCc
Confidence 7776 4455543 222222233445556 47777777543222 1 22 1224789999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
|.||..++ ++++.||+++++|.+.+-.. .|..+..+ + +.+.|..|.+|.+| +|++++++++
T Consensus 149 t~tG~~~~--------~i~~~~g~~~~VDa~qs~g~---~~idv~~~----~--~~~ss~~K~lGP~G--~g~l~~~~~~ 209 (355)
T cd00611 149 TIHGVEFD--------EVPDTGGVPLVADMSSNILS---RPIDVSKF----G--VIYAGAQKNLGPAG--VTVVIVRKDL 209 (355)
T ss_pred ccccEEcc--------eecccCCCeEEEEccccccC---CCCCHHHh----C--EEEeecccccCCCc--eEEEEECHHH
Confidence 99999754 23445999999999987322 13333332 2 45677899998666 8999998887
Q ss_pred cccCCc---hhHHHHHHHHhhh-cCCCcHHHHHHHHHhcC---CCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eeC-
Q 013521 305 RYSNGY---PVIKDFNRIVCTC-FNGASNIVQAGGLACLS---PDGFQALRTVIDYYKENAKIIVDAFQSL-GLK-VNG- 374 (441)
Q Consensus 305 ~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~- 374 (441)
+....+ ...+......... .++++.....+..++++ +.+ .++.+.++.++..+++++.|+++ |+. ...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~g--g~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~ 287 (355)
T cd00611 210 LGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQG--GVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVD 287 (355)
T ss_pred HhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHhCccccccCCC
Confidence 633111 1111000011111 23444444444444443 330 25888899999999999999998 863 211
Q ss_pred C--CCceEEEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 375 G--KNAPYVWVQFPGS-SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 375 ~--~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
+ ..+..+.+.+++. ...++...+ .+.|+...+|.. ..+.||+|+ +++.+|++++++.|+++
T Consensus 288 ~~~rs~~vvsf~~~~~~l~~~~~~~~-~r~G~~~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 288 KRARSRMNVPFRLGKEELEKEFLKEA-EAAGMIGLKGHR----SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HHHcCceEEEEEcCChhhhHHHHHHH-HHCCCcccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 1 1224477777653 123333444 446998666653 236899997 44999999999999875
No 242
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.81 E-value=2e-17 Score=158.62 Aligned_cols=317 Identities=13% Similarity=0.155 Sum_probs=200.6
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcH---HHHHHHHHHHhhhCCCC-CCcEEEcCC-cHHHHHH-HHHhcCCCC
Q 013521 86 IPDIITSAMAEHAFALSTVKGYKGYGAEQGNM---ALRTAIADKFYKDMGIE-GDEIFISDG-AQSDISR-LQMLLGSNV 159 (441)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~---~lr~~ia~~l~~~~~~~-~~~I~~t~G-~~~al~~-l~~l~~~gd 159 (441)
.|..+++++.+.+..+.+ .+...|....-.. ++-+.+.+.+.+-++.+ ..+|++++| +|.+++. +..++.+||
T Consensus 3 ~p~~v~~~~~~~~~~~~~-~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNG-TGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCHHHHHHHHHHHhCccC-CCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 578899999999886552 3333332222223 44444444444445763 457888877 9999998 788888999
Q ss_pred EEEEeCCCchhh--HhHHHHhccccccccccCccceeEEeecCCCCCc--cCC---CCCCCCccEEEEcCCCCccccCCC
Q 013521 160 TVAVQDPSFPAY--IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF--FPD---LSTTSRTDIIFFCSPNNPTGHAAT 232 (441)
Q Consensus 160 ~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~--~~~---~~~~~~~~~v~i~~p~NPtG~~~~ 232 (441)
++++..-+..+. .++++..| . ++.+..++..++ ..+ ++..+++++|.+++..|.||+..+
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~ 148 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYG------------V-VNVVASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR 148 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhC------------C-cEEEeccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc
Confidence 999888877764 45555555 3 444443322111 112 233468899999999999999876
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchh
Q 013521 233 WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPV 312 (441)
Q Consensus 233 ~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~ 312 (441)
++++.+++++++|.+.+-. ..|..+..+ + +++.|..|.+|.|| +|+++++++.+....+..
T Consensus 149 --------~l~~~~~~l~iVDavss~g---~~~id~~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~ 209 (349)
T TIGR01364 149 --------ELPDVKNAPLVADMSSNIL---SRPIDVSKF----G--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRIT 209 (349)
T ss_pred --------eecccCCCeEEEEcccccc---CccCCHHHc----c--EEEEecccccCCCc--eEEEEECHHHHhhcccCC
Confidence 5556789999999998732 113333222 3 89999999998666 899999988863311110
Q ss_pred --HHHHHHHH--hhhcCCCcHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC----CCceEEE
Q 013521 313 --IKDFNRIV--CTCFNGASNIVQAGGLACLSPDGFQ-ALRTVIDYYKENAKIIVDAFQSL-GLKVNGG----KNAPYVW 382 (441)
Q Consensus 313 --~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~ 382 (441)
...+.... .....+++.....+..++++.-... .++++.++.++..+++++.|+++ |+..... .....+.
T Consensus 210 ~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~s 289 (349)
T TIGR01364 210 PSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVV 289 (349)
T ss_pred CCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEE
Confidence 00111111 1222344555544444444411112 25888999999999999999998 6644321 1224466
Q ss_pred EEcCCC-ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 383 VQFPGS-SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 383 ~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
+.+++. ...++... +.++|+++.+|.. ..+.||+|+ +++.+|++.+++.|+++
T Consensus 290 f~~~~~~~~~~~~~~-~~~~Gi~~~~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~ 345 (349)
T TIGR01364 290 FTLGNEELEKRFLKE-AEERGLVSLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEF 345 (349)
T ss_pred EecCChhHhHHHHHH-HHHCCCcccCCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHH
Confidence 777643 22344344 4456998877754 235899996 45899999999999875
No 243
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.7e-18 Score=152.01 Aligned_cols=361 Identities=17% Similarity=0.151 Sum_probs=231.7
Q ss_pred hCCC-CCccccccccccccccccCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCC
Q 013521 28 SSRW-PVPRHCTEVSRNVNMESLQSGYLFPEISMRESEHIRKHPDARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVK 105 (441)
Q Consensus 28 ~~g~-~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~ 105 (441)
..+| ...|.|||-+.+.-...-.+ .+ ..+...+++++|+-+++ .+..+|++.++-++++.+++...
T Consensus 34 ~~~legi~gagtwk~erVi~s~q~p--~i----------~v~G~~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGl 101 (417)
T KOG1359|consen 34 GDELEGIKGAGTWKRERVITSRQGP--TI----------QVKGSDKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGL 101 (417)
T ss_pred cCccceecccccceeeeEEeecccc--eE----------EEeccccceeeecccccccccCChHHHHHHHHHHHHhCCCc
Confidence 4556 88999999765321111101 11 12233467999998885 56788999999999999887322
Q ss_pred CCCCC--CCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccc
Q 013521 106 GYKGY--GAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGK 183 (441)
Q Consensus 106 ~~~~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 183 (441)
....+ +...-...|...||++ +-..|.|+..++......++-.++.|.|.|+..+..+.++....+++.+.+.
T Consensus 102 ssvrfIcGtq~iHk~LE~kiAqf-----h~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLckry~h 176 (417)
T KOG1359|consen 102 SSVRFICGTQDIHKLLESKIAQF-----HGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCKRYRH 176 (417)
T ss_pred cceeEEecchHHHHHHHHHHHHH-----hCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHhhhcc
Confidence 21111 0112335566777776 4456777777777766666777889999999999999999888887764221
Q ss_pred cccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC
Q 013521 184 FLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263 (441)
Q Consensus 184 ~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~ 263 (441)
+....+ ...... ....+.++|+....-...|.+.| +++|.+++++||.++++||+|..+.++.
T Consensus 177 ----------~dv~~l---~~~l~~-a~k~r~klv~TDg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~ 239 (417)
T KOG1359|consen 177 ----------VDVFDL---EHCLIS-ACKMRLKLVVTDGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGE 239 (417)
T ss_pred ----------chhHHH---HHHHHH-hhhheEEEEEecceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecC
Confidence 111100 000000 11246677666677888999999 8899999999999999999999877765
Q ss_pred CCCcccccCC-CcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHh--hhcCC-CcH---HHHHHHH
Q 013521 264 SPRSIYEIPG-AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVC--TCFNG-ASN---IVQAGGL 336 (441)
Q Consensus 264 ~~~~~~~~~~-~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~---~~~~a~~ 336 (441)
......+..+ ..+.+|+.++++|.+| |---||..+|.+++ . +.+.+. ..+.+ .++ .+..++.
T Consensus 240 tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li--------~-llrqr~RpylFSnslppavV~~a~ka~ 308 (417)
T KOG1359|consen 240 TGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLI--------S-LLRQRSRPYLFSNSLPPAVVGMAAKAY 308 (417)
T ss_pred CCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHH--------H-HHHhcCCceeecCCCChhhhhhhHHHH
Confidence 5444444322 3466799999999997 33349999999984 2 322222 22211 221 1112222
Q ss_pred HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCc-CCC
Q 013521 337 ACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGF-GPG 414 (441)
Q Consensus 337 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f-~~~ 414 (441)
+++.. -.......+.+.+.+++.++..|+.+... +-+...+-+.+ ........++|+. ||.|..-+.- -|.
T Consensus 309 dllm~-----s~~~i~~~~a~~qrfr~~me~aGftIsg~-~hPI~pv~lGda~lA~~~ad~lLk~-Gi~Vigfs~PvVP~ 381 (417)
T KOG1359|consen 309 DLLMV-----SSKEIQSRQANTQRFREFMEAAGFTISGA-SHPICPVMLGDARLASKMADELLKR-GIYVIGFSYPVVPK 381 (417)
T ss_pred HHHHh-----hHHHHHHHHHHHHHHHHHHHhcCceecCC-CCCccceecccHHHHHHHHHHHHhc-CceEEeecCCcCCC
Confidence 23321 14455666778888888888889888653 34455555542 2344667888876 9999864432 244
Q ss_pred CCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 415 GNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 415 ~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
+...||+.+ .+++++++++++++.++
T Consensus 382 gkariRVqiSAaHt~edid~~i~Af~~v 409 (417)
T KOG1359|consen 382 GKARIRVQISAAHTEEDIDRLIEAFSEV 409 (417)
T ss_pred CceEEEEEEehhcCHHHHHHHHHHHHHH
Confidence 566788776 45899999999998764
No 244
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=7.9e-18 Score=165.31 Aligned_cols=221 Identities=18% Similarity=0.192 Sum_probs=142.2
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHh-ccccccccccCc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIV-GQAGKFLKETGK 190 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~ 190 (441)
.+-..+|+++||++. + .+..++++++++|+.+ +..++++||+|+++.+.|++....+... ...|
T Consensus 57 ~pt~~~Le~~lA~l~----g--~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~g-------- 122 (425)
T PRK06084 57 NPTNDVLEQRVAALE----G--GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIG-------- 122 (425)
T ss_pred CchHHHHHHHHHHHh----C--CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccce--------
Confidence 345678899999885 4 2455667777799987 6778899999999999998765544432 1111
Q ss_pred cceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcc
Q 013521 191 YRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSI 268 (441)
Q Consensus 191 ~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~ 268 (441)
+++.+++..+. .++++ .+++++|++++|+||||.+++ +++|+++|+++|++||+|++|+.... ..++
T Consensus 123 -i~v~~~d~~d~----e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~---~~p~ 191 (425)
T PRK06084 123 -IETRFAAHDDI----AALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL---CRPF 191 (425)
T ss_pred -eEEEEECCCCH----HHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc---CChh
Confidence 35555543211 11221 357899999999999999999 78999999999999999999984221 1112
Q ss_pred cccCCCcceeEEEecCCcccCCccceeEEEEeeccccc-cCC---c----------------------hhH-HHHHHHHh
Q 013521 269 YEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRY-SNG---Y----------------------PVI-KDFNRIVC 321 (441)
Q Consensus 269 ~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~-~~~---~----------------------~~~-~~~~~~~~ 321 (441)
.. +..+++.|+||.++.+|.++|.+++...... ... . ... ........
T Consensus 192 -~~----gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 266 (425)
T PRK06084 192 -EH----GADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLR 266 (425)
T ss_pred -hc----CCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHH
Confidence 11 2349999999999988999998777532110 000 0 000 00000111
Q ss_pred hhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 322 TCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 322 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
......+++... -.+ .+.+.+..+.++.+++...+.+.|+++
T Consensus 267 ~~g~~l~~~~a~---l~l--rgl~tl~~R~~~~~~na~~la~~L~~~ 308 (425)
T PRK06084 267 NMGAALSPFNAF---LIL--QGLETLALRMERHTENALKVARYLQQH 308 (425)
T ss_pred hcCCCCCHHHHH---HHH--cCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 222233444322 222 344556777888888999999999987
No 245
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.81 E-value=1e-18 Score=164.37 Aligned_cols=165 Identities=19% Similarity=0.226 Sum_probs=121.4
Q ss_pred CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCc
Q 013521 112 AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGK 190 (441)
Q Consensus 112 ~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~ 190 (441)
|..-..++++.+|+++ +.+ +-+++|+|+++++.+ +..++++||.|+++.|+|.++...+...|
T Consensus 57 ~~g~i~~~~~~~A~~~----ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g----------- 120 (294)
T cd00615 57 PTGPIKEAQELAARAF----GAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSG----------- 120 (294)
T ss_pred CChHHHHHHHHHHHHh----CCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCC-----------
Confidence 3444678889999886 543 455569999999887 68889999999999999999988888888
Q ss_pred cceeEEeecCCCCCc----cCCCC---C----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccc-
Q 013521 191 YRNIVYMNCRPENNF----FPDLS---T----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA- 258 (441)
Q Consensus 191 ~~~v~~v~~~~~~~~----~~~~~---~----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~- 258 (441)
.++++++.+.+..+ ..+.+ . .++++++++++| ||||.+++ +++|+++|+++|+++|+|++|+.
T Consensus 121 -~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~ 195 (294)
T cd00615 121 -AVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAH 195 (294)
T ss_pred -CEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhh
Confidence 47777776543321 12221 1 257899999999 78999998 88999999999999999999985
Q ss_pred cccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEE-Eeecc
Q 013521 259 YITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT-VVPEE 303 (441)
Q Consensus 259 ~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l-~~~~~ 303 (441)
+.+.+. +.+.. ..+.++++.|++|++ +|++.|++ ..+++
T Consensus 196 ~~~~~~~~~~~~----~~~~div~~S~hK~l--~g~~~~~~l~~~~~ 236 (294)
T cd00615 196 FRFHPILPSSAA----MAGADIVVQSTHKTL--PALTQGSMIHVKGD 236 (294)
T ss_pred hccCcccCcchh----hcCCcEEEEchhccc--chHhHHHHHHhCCC
Confidence 333321 22221 124569999999986 68876544 45444
No 246
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.7e-17 Score=160.22 Aligned_cols=214 Identities=14% Similarity=0.143 Sum_probs=139.8
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHH----HHhccccccccccC
Q 013521 115 GNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTS----VIVGQAGKFLKETG 189 (441)
Q Consensus 115 g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~ 189 (441)
+..+.++++++.+... ...++.|++++ +++|+.. +..++++||+|+++.|.|+++...+ ...|
T Consensus 61 ~gnPt~~~Le~~la~l-e~~~~~v~~sS-G~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~G---------- 128 (395)
T PRK05967 61 RGTPTTDALCKAIDAL-EGSAGTILVPS-GLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLG---------- 128 (395)
T ss_pred CCChHHHHHHHHHHHH-hCCCCEEEECc-HHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcC----------
Confidence 3344455555554321 12345555555 6788887 6788999999999999999976544 4445
Q ss_pred ccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccc
Q 013521 190 KYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY 269 (441)
Q Consensus 190 ~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~ 269 (441)
+++..++.+..+.+...+ .+++|+|++++|+||++ ...++++|+++|+++|+++|+|++|....+- .++
T Consensus 129 --i~v~~vd~~~~e~l~~al--~~~TklV~lesPsNP~l---~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~---~pl- 197 (395)
T PRK05967 129 --VEVEYYDPEIGAGIAKLM--RPNTKVVHTEAPGSNTF---EMQDIPAIAEAAHRHGAIVMMDNTWATPLYF---RPL- 197 (395)
T ss_pred --eEEEEeCCCCHHHHHHhc--CcCceEEEEECCCCCCC---cHHHHHHHHHHHHHhCCEEEEECCccCceec---Chh-
Confidence 477777543211111111 36799999999999976 4455999999999999999999999742211 111
Q ss_pred ccCCCcceeEEEecCCcccCC-ccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHH
Q 013521 270 EIPGAREVAIEISSFSKFAGF-TGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALR 348 (441)
Q Consensus 270 ~~~~~~~~~i~i~S~SK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 348 (441)
.+ +..+++.|.+|.++- .+.-.|+++.+++. .+.+...........++.. +..++ .+.+.+.
T Consensus 198 ~~----GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~--------~~~l~~~~~~~G~~~~p~d---a~l~~--rgl~Tl~ 260 (395)
T PRK05967 198 DF----GVDISIHAATKYPSGHSDILLGTVSANEKC--------WPQLLEAHGTLGLCAGPDD---TYQIL--RGLRTMG 260 (395)
T ss_pred Hc----CCCEEEEecccccCCCCCeeEEEEEcCHHH--------HHHHHHHHHHcCCCCCHHH---HHHHH--cCcccHH
Confidence 11 334999999998752 34667877766543 3334333333334445544 22222 4555567
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 013521 349 TVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 349 ~~~~~~~~~~~~l~~~L~~~ 368 (441)
-+.++..++...+.+.|+++
T Consensus 261 lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 261 IRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 77788888899999999987
No 247
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=1.8e-17 Score=161.50 Aligned_cols=342 Identities=15% Similarity=0.128 Sum_probs=211.1
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCC--CC-CCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGY--KG-YGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~--~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~ 149 (441)
..|+|=-+++ ..++.+.+++...+..... .++ .+ |+-.....++.....+...+.|+.+.-+|-.-+|++..+.
T Consensus 50 ~~l~LiasEN--~~s~~v~~a~~s~l~nkya-eg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~ 126 (493)
T PRK13580 50 SSLKLIASEN--YSSLAVQLAMGNLLTDKYA-EGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLV 126 (493)
T ss_pred cCceEecccc--cCCHHHHHHhcccccccCc-CCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHH
Confidence 4577766654 2567788888877654332 222 13 3323333444444444444578888889999999999888
Q ss_pred HHHHhcCC-------------------------------CCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEee
Q 013521 150 RLQMLLGS-------------------------------NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMN 198 (441)
Q Consensus 150 ~l~~l~~~-------------------------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~ 198 (441)
.++++++| ||+|+..++...+........+..+ .+.+.+..+
T Consensus 127 v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~-------~~~~~~~y~ 199 (493)
T PRK13580 127 AFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISG-------KMFHQRSYG 199 (493)
T ss_pred HHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhh-------heeeeEecc
Confidence 88888876 7999998887766533211111111 113566666
Q ss_pred cCCCCCccCCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC
Q 013521 199 CRPENNFFPDLST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG 273 (441)
Q Consensus 199 ~~~~~~~~~~~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~ 273 (441)
++.+.+ ..|++. .++++.|+++..+|- |...+ +++|.++|+++|+++++|++|.-........ ......
T Consensus 200 vd~~~g-~iD~d~l~~~~~~~~plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~~-~~~~~~ 273 (493)
T PRK13580 200 VDPDTG-LLDYDEIAALAREFKPLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKVF-TGDEDP 273 (493)
T ss_pred cCcccC-ccCHHHHHHHHhhcCCEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhceeccccc-hhhcCC
Confidence 765432 233322 356677787877665 44667 8888888999999999999998644432110 000101
Q ss_pred CcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHH
Q 013521 274 AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY 353 (441)
Q Consensus 274 ~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 353 (441)
.++..|+++|++|++ .|.+.|++++++++ .+.+.........++.++...++..++.+-.....+.++++
T Consensus 274 ~~~~D~vtgT~hKaL--~GP~GG~I~~~~~l--------~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~ 343 (493)
T PRK13580 274 VPHADIVTTTTHKTL--RGPRGGLVLAKKEY--------ADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQ 343 (493)
T ss_pred CCCCcEEEeCChhhc--cCCCeEEEEecHHH--------HHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHH
Confidence 123458999999998 24446999998876 34443222222222222222222222321111112567889
Q ss_pred HHHHHHHHHHHHHhCCCeeeC-CCCceEEEEEcCCCC-hHHHHHHHHHhcCeEEeCCCCc-CCCC---CCeEEEEeec--
Q 013521 354 YKENAKIIVDAFQSLGLKVNG-GKNAPYVWVQFPGSS-SWDVFAEILEKTHILTIPGSGF-GPGG---NEHIRVSAFG-- 425 (441)
Q Consensus 354 ~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~pg~~f-~~~~---~~~iRls~~~-- 425 (441)
+.++.+.|.+.|.+.|+.+.. ...++.+++.+.+.. ....+...|++.||.+.+-... .+.+ ...|||+...
T Consensus 344 l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~t 423 (493)
T PRK13580 344 VVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALT 423 (493)
T ss_pred HHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhh
Confidence 999999999999999998753 245788999996432 2335665677779999864432 2333 6789999633
Q ss_pred ----CHHHHHHHHHHHHhh
Q 013521 426 ----HREYISEACRRLKNF 440 (441)
Q Consensus 426 ----~~~~~~~~l~~l~~~ 440 (441)
++++++++++.|.++
T Consensus 424 trg~teedi~~iad~l~~~ 442 (493)
T PRK13580 424 TLGMGSDEMDEVAELIVKV 442 (493)
T ss_pred hcCCCHHHHHHHHHHHHHH
Confidence 578999999998765
No 248
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.80 E-value=6.7e-17 Score=158.78 Aligned_cols=343 Identities=12% Similarity=0.059 Sum_probs=191.9
Q ss_pred CCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhC--CCC-CCcEEE-cCC
Q 013521 71 DARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDM--GIE-GDEIFI-SDG 143 (441)
Q Consensus 71 ~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~--~~~-~~~I~~-t~G 143 (441)
++.++|+..|-. .+ ..+|.+.+++.+.+.+... ... .....+.+..+|+.+.+.. +.. .+.+++ +++
T Consensus 34 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~---~~~---~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 107 (412)
T TIGR02407 34 GKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGI---IHS---LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPT 107 (412)
T ss_pred CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccc---eec---cccCcHHHHHHHHHHHHhccCccCCCceEEEeCCC
Confidence 456788766632 22 3679999999998875321 111 0112344455555554321 111 135656 478
Q ss_pred cHHHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHhccccccc-cccCccceeEEeecCCCCC---ccCC-CC----C
Q 013521 144 AQSDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFL-KETGKYRNIVYMNCRPENN---FFPD-LS----T 211 (441)
Q Consensus 144 ~~~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~v~~v~~~~~~~---~~~~-~~----~ 211 (441)
+++|... + ........+|+....+|++....+.......... ........+..+|...... ...+ ++ .
T Consensus 108 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~ 187 (412)
T TIGR02407 108 GTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLED 187 (412)
T ss_pred chHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHh
Confidence 8888875 4 2223345689999999999765544332111000 0000001334444321000 0000 11 1
Q ss_pred C----CCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCC
Q 013521 212 T----SRTDIIFFCSP-NNPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFS 285 (441)
Q Consensus 212 ~----~~~~~v~i~~p-~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 285 (441)
. +++.+|+ ..| +++.|. ..|.+.+++|.++|++||+++|+||++..|...+.........-.+| +.++|
T Consensus 188 ~~~~~~~~aavi-~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD----i~~~~ 262 (412)
T TIGR02407 188 SSSGVDLPAAVI-LETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD----IVCLS 262 (412)
T ss_pred ccCCCCceEEEE-eccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC----EEEec
Confidence 0 2455655 456 888998 57999999999999999999999999986543332111111111345 33689
Q ss_pred cccCCc-cceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhc----CCCcH-HHHHHHHHHHHHHHH
Q 013521 286 KFAGFT-GVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACL----SPDGF-QALRTVIDYYKENAK 359 (441)
Q Consensus 286 K~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l----~~~~~-~~~~~~~~~~~~~~~ 359 (441)
|.++ + |+++|++++++++ .. +.......+++.+++...++.+.+ .+... ++++++.+.++++.+
T Consensus 263 K~lg-~~G~pigav~~~~~~-~~--------~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~ 332 (412)
T TIGR02407 263 KSIS-GYGLPLALTLIKPEL-DV--------WKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLD 332 (412)
T ss_pred hhcc-CCccceeEEEEchhh-hc--------cCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9998 7 9999999998764 11 111112223345666444444443 33222 334444444444444
Q ss_pred HHHHHHHhCCCeeeCCCCceEEEEEcCCCC-hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHH
Q 013521 360 IIVDAFQSLGLKVNGGKNAPYVWVQFPGSS-SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRR 436 (441)
Q Consensus 360 ~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~ 436 (441)
.+.+.+.. +.......|+++|++++... ...+...++ ++||.+.+... ..+.||++. ..+++++++++++
T Consensus 333 ~l~~~~~~--~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~-~~Gv~v~~~~~----~~~~lr~~p~l~~t~~~i~~~~~~ 405 (412)
T TIGR02407 333 RIVAEYPE--LIKQVRGRGLMQGIECGDGDLAGKIAKAAF-ENGLIIETSGP----NDEVIKLLPPLTIDEETLQQGLDI 405 (412)
T ss_pred HHHhhCCC--ceEeeecceeEEEEEecChHHHHHHHHHHH-HCCCEEeccCC----CCCEEEEECCCCCCHHHHHHHHHH
Confidence 33333221 22223347899999997433 234555555 45999987432 246799884 5689999999999
Q ss_pred HHhhC
Q 013521 437 LKNFL 441 (441)
Q Consensus 437 l~~~l 441 (441)
|.++|
T Consensus 406 l~~~l 410 (412)
T TIGR02407 406 LEQAV 410 (412)
T ss_pred HHHHH
Confidence 98864
No 249
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=3.6e-17 Score=159.57 Aligned_cols=217 Identities=15% Similarity=0.162 Sum_probs=145.1
Q ss_pred cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH----HHHhcccccccccc
Q 013521 114 QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT----SVIVGQAGKFLKET 188 (441)
Q Consensus 114 ~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~~ 188 (441)
+-...|.+.+|++. + .+..+.++++++|+.+ +..++++||+|+++.++|.+.... +...|
T Consensus 61 Ptv~~lE~~la~le----g--~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~G--------- 125 (432)
T PRK06702 61 PTLAAFEQKLAELE----G--GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLG--------- 125 (432)
T ss_pred cHHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCC---------
Confidence 34677888888875 3 2457889999999997 677899999999999999876665 45556
Q ss_pred CccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC
Q 013521 189 GKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR 266 (441)
Q Consensus 189 ~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~ 266 (441)
++++++....+ ..++++ .+++|+|++.+|+||++.+.+ +++|+++|++||+++|+|++|.. |
T Consensus 126 ---i~v~~vd~~~d---~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~t------P- 189 (432)
T PRK06702 126 ---IDVTFFNPNLT---ADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLAT------P- 189 (432)
T ss_pred ---CEEEEECCCCC---HHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCc------h-
Confidence 57777754211 011221 478999999999999999999 99999999999999999999862 2
Q ss_pred cccc-cCCCcceeEEEecCCc-----ccCCcccee-----EEEEeeccccccCCch---------------hHHHHHHHH
Q 013521 267 SIYE-IPGAREVAIEISSFSK-----FAGFTGVRL-----GWTVVPEELRYSNGYP---------------VIKDFNRIV 320 (441)
Q Consensus 267 ~~~~-~~~~~~~~i~i~S~SK-----~~~~~G~r~-----G~l~~~~~~~~~~~~~---------------~~~~~~~~~ 320 (441)
.+.. ++ .+-.|++.|+|| ..+++|.++ +|...+...+...... ..+......
T Consensus 190 ~~~~pl~--~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (432)
T PRK06702 190 YLCQAFE--HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLL 267 (432)
T ss_pred hhCChhh--cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHH
Confidence 1111 11 122399999999 666777776 5655443322110000 000111112
Q ss_pred hhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 321 CTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 321 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
.......+++....+..-|+ .+..+.++.+++...+.+.|+++
T Consensus 268 ~~~g~~~sp~~a~l~~rgL~-----Tl~lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 268 RDYGNCMSPFNAYISNIGLE-----TLHLRMERHSENALAVAKWLADH 310 (432)
T ss_pred HHccCCCCHHHHHHHHhccC-----cHHHHHHHHHHHHHHHHHHHHhC
Confidence 22234566666544444443 34566667779999999999987
No 250
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.80 E-value=5.9e-17 Score=158.36 Aligned_cols=303 Identities=16% Similarity=0.123 Sum_probs=188.6
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHh-cCCCCEEEEe
Q 013521 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQML-LGSNVTVAVQ 164 (441)
Q Consensus 87 ~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l-~~~gd~Vlv~ 164 (441)
.+...+++.+.+.. +. |.......++++++|+++ +. ++.++++|+++|+.+ +..+ +++||+|+++
T Consensus 9 ~~~~~~~v~~~~~~-----~~--~~~g~~~~~le~~la~~~----g~--~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~ 75 (380)
T TIGR03588 9 DQDDIDAVVEVLKS-----DF--LTQGPTVPAFEEALAEYV----GA--KYAVAFNSATSALHIACLALGVGPGDRVWTT 75 (380)
T ss_pred CHHHHHHHHHHHhc-----CC--ccCChhHHHHHHHHHHHH----CC--CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeC
Confidence 34557777776653 22 223446789999999997 44 345666778899987 5666 6899999999
Q ss_pred CCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----C----CCccEEEEcCCCCccccCCCHHH
Q 013521 165 DPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----T----SRTDIIFFCSPNNPTGHAATWQQ 235 (441)
Q Consensus 165 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~----~~~~~v~i~~p~NPtG~~~~~~~ 235 (441)
.|+|+++...+...| .+++.++++++ .+..+++. . +++++|++ .|++|...+
T Consensus 76 ~~~~~~~~~~~~~~G------------~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~--- 136 (380)
T TIGR03588 76 PITFVATANCALYCG------------AKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD--- 136 (380)
T ss_pred CcchHHHHHHHHHcC------------CEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCC---
Confidence 999999988888888 58999998754 23333221 2 57888876 456898877
Q ss_pred HHHHHHHHHHcCcEEEEcccccccc-cCCCCCcccccCCCcceeEEEecCC--cccCCccceeEEEEeeccccccCCchh
Q 013521 236 LKKLVEFAKANGSIIVYDSAYAAYI-TDPSPRSIYEIPGAREVAIEISSFS--KFAGFTGVRLGWTVVPEELRYSNGYPV 312 (441)
Q Consensus 236 ~~~i~~~a~~~~~~ii~De~~~~~~-~~~~~~~~~~~~~~~~~~i~i~S~S--K~~~~~G~r~G~l~~~~~~~~~~~~~~ 312 (441)
+++|.++|++||++||+|++++... +++.+ +... ... .+.+.||+ |.++ .| ..|+++.+++.+
T Consensus 137 ~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~--~g~~-~~~--d~~~~S~~~~K~~~-~~-~GG~v~~~~~~~------- 202 (380)
T TIGR03588 137 MQAIAALAKKHGLKIIEDASHALGAEYGGKP--VGNC-RYA--DATVFSFHPVKIIT-TA-EGGAVTTNDEEL------- 202 (380)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccCccCCEe--CCCc-ccc--ceEEEecCCCCccc-cc-CceEEEECCHHH-------
Confidence 8899999999999999999998532 23212 2111 012 36777775 8886 33 468888765543
Q ss_pred HHHHHHHHhhhcC-------------------------CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 013521 313 IKDFNRIVCTCFN-------------------------GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQS 367 (441)
Q Consensus 313 ~~~~~~~~~~~~~-------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 367 (441)
.+++...+..... ..+.+....+... .+.+++..++-+++.+++.+.|.+
T Consensus 203 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~q-----L~~l~~~~~~r~~~~~~~~~~L~~ 277 (380)
T TIGR03588 203 AERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQ-----LKKLDRFVAKRREIAARYDRLLKD 277 (380)
T ss_pred HHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333332221100 0111211112222 233566677777788888888887
Q ss_pred C-CCeeeCCC-C---ceE-EEEEcC---CCChHHHHHHHHHhcCeEEeCCCC-------cCC---CC---------CCeE
Q 013521 368 L-GLKVNGGK-N---APY-VWVQFP---GSSSWDVFAEILEKTHILTIPGSG-------FGP---GG---------NEHI 419 (441)
Q Consensus 368 ~-g~~~~~~~-~---~~~-~~~~~~---~~~~~~~~~~ll~~~gi~v~pg~~-------f~~---~~---------~~~i 419 (441)
+ ++....+. + .++ ..+.++ +....++.+.| +++||.+++... |.. .. ...|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l 356 (380)
T TIGR03588 278 LPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEI 356 (380)
T ss_pred CCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceE
Confidence 6 44433221 1 122 223333 23455666665 566998874321 100 00 1567
Q ss_pred EEEee--cCHHHHHHHHHHHHhhC
Q 013521 420 RVSAF--GHREYISEACRRLKNFL 441 (441)
Q Consensus 420 Rls~~--~~~~~~~~~l~~l~~~l 441 (441)
++.+. .++++++..++.|+++|
T Consensus 357 ~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 357 SLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred EcCCCCCCCHHHHHHHHHHHHHhC
Confidence 77763 37899999999999875
No 251
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=8.4e-17 Score=158.31 Aligned_cols=332 Identities=14% Similarity=0.082 Sum_probs=192.0
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHH-hhccCCCCCCCC-CCCcCcHHHHH----HHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHA-FALSTVKGYKGY-GAEQGNMALRT----AIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~-~~~~~~~~~~~Y-~~~~g~~~lr~----~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
+.++|-.+++- .+|.+.+++...+ .+++......++ +-.+...+|.+ .+++++ +.+ ..++.+++++.
T Consensus 29 ~~~~l~~sen~--~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~----g~~-~alv~~~SG~~ 101 (416)
T PRK13034 29 DHLELIASENF--TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLF----GCD-YANVQPHSGSQ 101 (416)
T ss_pred cCeeecccccC--CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHh----CCC-ceEEecCCcHH
Confidence 45777666543 4788999999985 655432222222 11233556666 777765 544 33344556566
Q ss_pred HHHH-HHHhcCCCCEEEEeCCCchhh-HhHHHH--hccccccccccCccceeEEeecCCCCCccCCC---CC---CCCcc
Q 013521 147 DISR-LQMLLGSNVTVAVQDPSFPAY-IDTSVI--VGQAGKFLKETGKYRNIVYMNCRPENNFFPDL---ST---TSRTD 216 (441)
Q Consensus 147 al~~-l~~l~~~gd~Vlv~~p~y~~~-~~~~~~--~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~---~~---~~~~~ 216 (441)
|+.. +..+++|||+|+++..+|.+. ...+.. .+. ..+...++++.. ....|+ ++ ..+++
T Consensus 102 A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~k 170 (416)
T PRK13034 102 ANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGK----------WYNAVQYGVDRL-TGLIDYDEVEELAKEHKPK 170 (416)
T ss_pred HHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccc----------eeeeEEcccccc-cCCcCHHHHHHHHhhcCCe
Confidence 7665 788899999999999999762 211111 010 012233444322 111221 11 23678
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
+|++.++. +|...+ +.+|.++|++||+++|+|++|+...... +.....+ .+..++++|++|.++.+ .-|
T Consensus 171 lVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~-g~~~~~~---~~~Di~~~s~~K~l~g~--~GG 239 (416)
T PRK13034 171 LIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAA-GEHPNPF---PHAHVVTTTTHKTLRGP--RGG 239 (416)
T ss_pred EEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCccc-CCCCCCC---CCceEEEEeCcccCCCC--CCe
Confidence 88775654 455556 7788888999999999999988533321 1111112 12458999999999422 248
Q ss_pred EEEeeccccccCCchhHHHHHHHHhhhcCC-CcHHHHHHHH-HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 013521 297 WTVVPEELRYSNGYPVIKDFNRIVCTCFNG-ASNIVQAGGL-ACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNG 374 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 374 (441)
+++++++.+ ...+.......+.+ ..++...++. ++++... ....++++++.++.+++.+.|.+.|+.+..
T Consensus 240 ~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~-~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~ 311 (416)
T PRK13034 240 MILTNDEEI-------AKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQ-PEFKTYAKQVIANAQALAEVLKERGYDLVS 311 (416)
T ss_pred EEEECcHHH-------HHHHHhhcCCcccCCccHHHHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHHHHcCCEecc
Confidence 887766553 22222211111111 2222222222 2222111 112456788999999999999988988754
Q ss_pred C-CCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCC-C--c-CCCCCCeEEEEe------ecCHHHHHHHHHHHHhhC
Q 013521 375 G-KNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGS-G--F-GPGGNEHIRVSA------FGHREYISEACRRLKNFL 441 (441)
Q Consensus 375 ~-~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~-~--f-~~~~~~~iRls~------~~~~~~~~~~l~~l~~~l 441 (441)
+ ..++.+++.+.. ......+...|+++||.+.+-. . + .+..+..+|+++ ..++++++++++.|++++
T Consensus 312 ~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~ 390 (416)
T PRK13034 312 GGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVL 390 (416)
T ss_pred CCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 2 457778888763 2244445455666799997511 1 1 122356799994 235899999999998753
No 252
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=2e-16 Score=156.98 Aligned_cols=340 Identities=12% Similarity=0.098 Sum_probs=202.7
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~ 145 (441)
.++.++|+..|- ..+ ..+|.+.+++.+.+.+.. .+.......+.+..+|+.+.+..+.. .+.++++++++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~------~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 127 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT------HTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGA 127 (443)
T ss_pred CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc------CccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 456788887664 222 367899999999987531 11111123455666666665433322 25788888889
Q ss_pred HHHHH-HH--HhcCCCCEEEEeCCCchhhHhHHHHhcc-c----cccccccCccceeEEeecCCC-CC---ccC------
Q 013521 146 SDISR-LQ--MLLGSNVTVAVQDPSFPAYIDTSVIVGQ-A----GKFLKETGKYRNIVYMNCRPE-NN---FFP------ 207 (441)
Q Consensus 146 ~al~~-l~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~-~----~~~~~~~~~~~~v~~v~~~~~-~~---~~~------ 207 (441)
+|+.. +. ......++|+...++|++....+..... . ..+.+.. ..+..++.... .. ...
T Consensus 128 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (443)
T PRK06058 128 EAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFA---PEVYRAPMSYPYRDPKGLATDGEEAA 204 (443)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCC---CCceEcCCCcccccccccccchHHHH
Confidence 99886 42 2333457899999999998655443321 0 0000000 11222221110 00 000
Q ss_pred -----CCC---CCCCccEEEEcCCCCcc-ccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcce
Q 013521 208 -----DLS---TTSRTDIIFFCSPNNPT-GHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREV 277 (441)
Q Consensus 208 -----~~~---~~~~~~~v~i~~p~NPt-G~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~ 277 (441)
.++ ...++.+++ ..|-++. |.. .+++.+++|.++|++||+++|.||++..|...+.......+.-.||
T Consensus 205 ~~~~~~l~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PD- 282 (443)
T PRK06058 205 ARAITVIEKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPD- 282 (443)
T ss_pred HHHHHHHHHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCC-
Confidence 011 123555544 6885555 444 4688999999999999999999999997755442211122222344
Q ss_pred eEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Q 013521 278 AIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKEN 357 (441)
Q Consensus 278 ~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 357 (441)
+ -+++|.+| .|+++|++++++++. +.+.......+.+.+++++.++.+.|+.-.. +++.++.+++
T Consensus 283 -i--v~~gK~l~-~G~Pi~av~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~---~~l~~~~~~~ 347 (443)
T PRK06058 283 -L--ITTAKGIA-GGLPLSAVTGRAEIM--------DAPHPGGLGGTYGGNPVACAAALAAIETIEE---DDLVARARQI 347 (443)
T ss_pred -E--EEEccccc-CCCccEEEEEcHHHH--------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHH---cCHHHHHHHH
Confidence 2 24689998 999999999988873 3333222334556789999999998862111 3455666666
Q ss_pred HHHHHHHHHhC----CCee-eCCCCceEEEEEcCCC----Ch----HHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--
Q 013521 358 AKIIVDAFQSL----GLKV-NGGKNAPYVWVQFPGS----SS----WDVFAEILEKTHILTIPGSGFGPGGNEHIRVS-- 422 (441)
Q Consensus 358 ~~~l~~~L~~~----g~~~-~~~~~~~~~~~~~~~~----~~----~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls-- 422 (441)
.+++.+.|+++ ++.. .. ..|.++.+.+... .+ ..+...++ ++||.+.|+..|+ +.||+.
T Consensus 348 g~~l~~~L~~l~~~~~~i~~vr-g~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~~~----~~lr~~Pp 421 (443)
T PRK06058 348 EALMTDRLRALAAEDDRIGDVR-GRGAMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGTYG----NVIRLLPP 421 (443)
T ss_pred HHHHHHHHHHHHhhCCcEEeee-ccceEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCCCC----CEEEEECC
Confidence 67777777653 3211 22 2455555555311 11 22344444 4599999875443 589996
Q ss_pred eecCHHHHHHHHHHHHhhC
Q 013521 423 AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 423 ~~~~~~~~~~~l~~l~~~l 441 (441)
+..+++++++++++|.+++
T Consensus 422 l~~t~~~i~~~~~~l~~~l 440 (443)
T PRK06058 422 LVIGDELLREGLDVLEAAL 440 (443)
T ss_pred CccCHHHHHHHHHHHHHHH
Confidence 6679999999999998864
No 253
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=1.5e-16 Score=158.41 Aligned_cols=345 Identities=12% Similarity=0.083 Sum_probs=197.4
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhcc-CCCCCCCCCC-CcCcHH----HHHHHHHHHhhhCCCCCCcEEEc---CC
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALS-TVKGYKGYGA-EQGNMA----LRTAIADKFYKDMGIEGDEIFIS---DG 143 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~-~~~~~~~Y~~-~~g~~~----lr~~ia~~l~~~~~~~~~~I~~t---~G 143 (441)
..|+|-.+++- .++.+.+++...+.... .......|.. ..-... .|+.+++. ++.+++++.++ ++
T Consensus 35 ~~l~l~~sen~--~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~l----f~a~~~~~~~~~~~~s 108 (452)
T PTZ00094 35 EGLELIASENF--TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEA----FGLDPEEWGVNVQPYS 108 (452)
T ss_pred cCeeEeccccc--CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHH----hCCCcccceeecCCCc
Confidence 56888877763 56888889988875332 0111112221 111222 23344444 57888887666 67
Q ss_pred cHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC---CCCccEE
Q 013521 144 AQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST---TSRTDII 218 (441)
Q Consensus 144 ~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~---~~~~~~v 218 (441)
++++..+ +.+++++||.|++....|.+............. .......++..++++.++..+.+ +++ ..+++++
T Consensus 109 gt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~--~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lv 186 (452)
T PTZ00094 109 GSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKV--SATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLI 186 (452)
T ss_pred hHHHHHHHHHHhcCCCCEEEecccccCCccccccccccccc--ccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEE
Confidence 7778776 788899999999988888776543321110000 00000124455555544332222 111 2367776
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l 298 (441)
++. ++.+|...| +++|.++|+++|+++++|++++-...... +...+ ..+..+++.|++|+++ |.+.|++
T Consensus 187 i~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~---~~~~~-~~~~D~l~~S~hK~l~--GP~Gg~l 255 (452)
T PTZ00094 187 IAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAG---VLPSP-FPYADVVTTTTHKSLR--GPRSGLI 255 (452)
T ss_pred EEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCC---CCCCC-CCCCcEEEcCCccCCC--CCCceEE
Confidence 653 334999999 77888889999999999999984332211 11111 1133489999999873 3345888
Q ss_pred EeeccccccCCchhHHHHHHHHhhhc-CCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC-
Q 013521 299 VVPEELRYSNGYPVIKDFNRIVCTCF-NGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGK- 376 (441)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~- 376 (441)
+++++.... +...+.......+ .+.+.....+..++++.-.....+..++++.++.+++.+.|.+.|+++..+.
T Consensus 256 ~~~~~~~~~----l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~ 331 (452)
T PTZ00094 256 FYRKKVKPD----IENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT 331 (452)
T ss_pred EEecccchH----HHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC
Confidence 887654210 0111110000111 1223333333333343111123466778899999999999988888776422
Q ss_pred CceEEEEEcC--CCChHHHHHHHHHhcCeEEe-CCCCcCC--CCCCeEEEEe--ecC----HHHHHHHHHHHHhhC
Q 013521 377 NAPYVWVQFP--GSSSWDVFAEILEKTHILTI-PGSGFGP--GGNEHIRVSA--FGH----REYISEACRRLKNFL 441 (441)
Q Consensus 377 ~~~~~~~~~~--~~~~~~~~~~ll~~~gi~v~-pg~~f~~--~~~~~iRls~--~~~----~~~~~~~l~~l~~~l 441 (441)
....+++.+. +.+. +.+..+|+++||.+. ++-.+.. ..+++||+++ .++ +++++++++.|.+++
T Consensus 332 ~~~~~~v~~~~~~~~~-~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~ 406 (452)
T PTZ00094 332 DNHLVLVDLRPFGITG-SKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAV 406 (452)
T ss_pred CCceEeecCCcCCCCH-HHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 2334555554 3333 445555677799994 4443321 2357899995 333 899999999988753
No 254
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.77 E-value=1.2e-16 Score=141.59 Aligned_cols=318 Identities=16% Similarity=0.174 Sum_probs=212.9
Q ss_pred CCCeEEeCCCCCC-CCCcHHHHHHHHHHHhhccCC-CCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEE--EcCCc
Q 013521 71 DARLIRLGIGDTT-QPIPDIITSAMAEHAFALSTV-KGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIF--ISDGA 144 (441)
Q Consensus 71 ~~~~i~l~~g~~~-~~~~~~~~~al~~~~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~--~t~G~ 144 (441)
++.-++|++|.+- -...|+++..+.+.-..+.+. ...+.|-|-.|.+.++++.++.+.+ ...+..++++ -+-++
T Consensus 29 ~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsG 108 (410)
T KOG1412|consen 29 DPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSG 108 (410)
T ss_pred CcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccc
Confidence 4557899999753 234556665665554444322 3345799999999999999998743 2223344422 23334
Q ss_pred HHHHHH----HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-------CCCCC
Q 013521 145 QSDISR----LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-------LSTTS 213 (441)
Q Consensus 145 ~~al~~----l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-------~~~~~ 213 (441)
+.|+.+ +..++. ...|.+..|+|.....++..+|. ..+...+.-+.+.-..| ++..+
T Consensus 109 TGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf-----------~tv~~Y~yWd~~~k~~d~e~~Lsdl~~AP 176 (410)
T KOG1412|consen 109 TGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGF-----------TTVATYPYWDAENKCVDLEGFLSDLESAP 176 (410)
T ss_pred cchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCC-----------ceeeeeeeecCCCceecHHHHHHHHhhCC
Confidence 445443 334444 56799999999999999999984 24444444333332333 34445
Q ss_pred CccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc---CCCcceeEEEecCCcccC
Q 013521 214 RTDIIFFCSP-NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI---PGAREVAIEISSFSKFAG 289 (441)
Q Consensus 214 ~~~~v~i~~p-~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~---~~~~~~~i~i~S~SK~~~ 289 (441)
.-..++++.. |||||.-.+.|++.+|+++.++.+.+.+.|-+|..|..++.....+++ -....-.+++.||+|.||
T Consensus 177 e~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfG 256 (410)
T KOG1412|consen 177 EGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFG 256 (410)
T ss_pred CCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcc
Confidence 5555566544 999999999999999999999999999999999998876543222221 111234799999999999
Q ss_pred CccceeEEEE--eeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-----HHHHHHHHHHHHHHHHHH
Q 013521 290 FTGVRLGWTV--VPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-----QALRTVIDYYKENAKIIV 362 (441)
Q Consensus 290 ~~G~r~G~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~ 362 (441)
+-+-|+|-+. +.+... ...+..++..+....+..++......+...|+.... ..++.+-.++++.|..|+
T Consensus 257 lYneRvGnltvv~~n~a~---i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLr 333 (410)
T KOG1412|consen 257 LYNERVGNLTVVVNNPAV---IAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALR 333 (410)
T ss_pred cccccccceEEEecChhH---HHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999554 333331 122334555555666777778888888888885543 346677778888888898
Q ss_pred HHHHhCC----CeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeC
Q 013521 363 DAFQSLG----LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIP 407 (441)
Q Consensus 363 ~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p 407 (441)
+.|..++ |.....+-|+|-+-.+ + ...++.|.+++.|++.+
T Consensus 334 d~L~aL~TPGtWDHI~~QiGMFSyTGL---t-p~qV~~li~~h~vyLl~ 378 (410)
T KOG1412|consen 334 DHLVALKTPGTWDHITQQIGMFSYTGL---T-PAQVDHLIENHKVYLLS 378 (410)
T ss_pred HHHHhcCCCCcHHHHHhhccceeecCC---C-HHHHHHHHHhceEEEec
Confidence 8888773 3333445677766554 2 35678889999999876
No 255
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.77 E-value=2e-16 Score=154.01 Aligned_cols=318 Identities=14% Similarity=0.077 Sum_probs=194.3
Q ss_pred EEeCCCCCCCCCcHH-HHHHHHHHHhhccCCCCCCCCCC--CcCcHHHHHHHHHHHhhhCCCC-CCcEEEcC-CcHHHHH
Q 013521 75 IRLGIGDTTQPIPDI-ITSAMAEHAFALSTVKGYKGYGA--EQGNMALRTAIADKFYKDMGIE-GDEIFISD-GAQSDIS 149 (441)
Q Consensus 75 i~l~~g~~~~~~~~~-~~~al~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~-G~~~al~ 149 (441)
++|..|. ..+++. +++++.+.... ..+..+ ..-..+.|+.+++++ +++ +++|++++ |+|.+++
T Consensus 14 ~~f~~Gp--~~~~~~~v~~a~~~~~~~------~~hr~~~f~~~~~~~r~~l~~l~----~~~~~~~v~~~~gs~T~~~~ 81 (378)
T PRK03080 14 PRFSSGP--CKKRPGWQLEALADALLG------RSHRQKPVKALLKRVIEGTRELL----SLPEGYEVGIVPGSDTGAWE 81 (378)
T ss_pred CCcCCCC--cCCChHHHHHHHHhhhcc------cCcCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEECCchHHHHH
Confidence 4455453 234555 89998865421 112221 234455666666664 764 45899886 8899999
Q ss_pred H-HHHhcCC-CCEEEEeCCCchhh-Hh-HHHHhccccccccccCccc-eeEEeecCCCCCccCCCCCCCCccEEEEcCCC
Q 013521 150 R-LQMLLGS-NVTVAVQDPSFPAY-ID-TSVIVGQAGKFLKETGKYR-NIVYMNCRPENNFFPDLSTTSRTDIIFFCSPN 224 (441)
Q Consensus 150 ~-l~~l~~~-gd~Vlv~~p~y~~~-~~-~~~~~g~~~~~~~~~~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~ 224 (441)
. +..++++ ++.|++ .-.|+.- .. +.+..| . +++.++.++.. .+++++...++.|.+++.+
T Consensus 82 ~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g------------~~~v~~~~~~~g~--~~d~~~i~~~~~V~~~h~~ 146 (378)
T PRK03080 82 MALWSLLGARRVDHLA-WESFGSKWATDVVKQLK------------LEDPRVLEADYGS--LPDLSAVDFDRDVVFTWNG 146 (378)
T ss_pred HHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcC------------CCCceEeccCCCC--CCCHhhcCCCCCEEEEecC
Confidence 7 6777774 445544 4455442 11 113345 4 66777665432 3344333336678888889
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
|.||..+| +++|++ +++|+++|+|.+.+-... |..+.. ..+++.|..|+++ +...+|+++++++.
T Consensus 147 t~tG~~~p---i~~I~~--~~~g~~~vVDa~qs~G~~---pidv~~------iD~~~~s~~K~l~-~P~G~g~l~v~~~~ 211 (378)
T PRK03080 147 TTTGVRVP---VARWIG--ADREGLTICDATSAAFAL---PLDWSK------LDVYTFSWQKVLG-GEGGHGMAILSPRA 211 (378)
T ss_pred Cccceecc---chhhcc--ccCCCeEEEecccccccC---CCCHHH------CcEEEEehhhhCC-CCCceEEEEECHHH
Confidence 99999999 667777 789999999999873221 333322 2499999999986 33459999998877
Q ss_pred cccCCchh-----------HH---HHH-HHHhhhcCCCcHHHH---HHHHHhcCCC-cHHHHHHHHHHHHHHHHHHHHHH
Q 013521 305 RYSNGYPV-----------IK---DFN-RIVCTCFNGASNIVQ---AGGLACLSPD-GFQALRTVIDYYKENAKIIVDAF 365 (441)
Q Consensus 305 ~~~~~~~~-----------~~---~~~-~~~~~~~~~~~~~~~---~a~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L 365 (441)
+....+.. .. ... +....+.++++.... .+++..+.+. + ++++.++.++..+++++.|
T Consensus 212 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG---~e~i~~r~~~l~~~l~~~l 288 (378)
T PRK03080 212 VERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGG---LDALIARTAANASVLYDWA 288 (378)
T ss_pred HHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHH
Confidence 53211100 00 011 111112233443333 3344444433 3 4777888888999999999
Q ss_pred HhCC-CeeeC--C--CCceEEEEEcCC---CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHH
Q 013521 366 QSLG-LKVNG--G--KNAPYVWVQFPG---SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACR 435 (441)
Q Consensus 366 ~~~g-~~~~~--~--~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~ 435 (441)
++.+ +.+.. + ..+..+.+.+++ ..+.++...++++ ||.+..|.. .. ..+.+|+|+ ++++++++.+++
T Consensus 289 ~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~-~~-~~~~vRis~~~~~t~~di~~l~~ 365 (378)
T PRK03080 289 EKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPY-RD-APNGLRIWCGPTVEPADVEALTP 365 (378)
T ss_pred HhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccc-cC-CCCcEEEecCCCCCHHHHHHHHH
Confidence 9884 55542 1 123456677765 2344566777765 888887653 22 347899996 568999999999
Q ss_pred HHHhh
Q 013521 436 RLKNF 440 (441)
Q Consensus 436 ~l~~~ 440 (441)
.|+++
T Consensus 366 al~~~ 370 (378)
T PRK03080 366 WLDWA 370 (378)
T ss_pred HHHHH
Confidence 99875
No 256
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.77 E-value=7.1e-18 Score=151.33 Aligned_cols=325 Identities=15% Similarity=0.179 Sum_probs=216.6
Q ss_pred hcCCCCCeEEeCCCCCC-C---C-CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh-hCC-CCCCcEE
Q 013521 67 RKHPDARLIRLGIGDTT-Q---P-IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK-DMG-IEGDEIF 139 (441)
Q Consensus 67 ~~~~~~~~i~l~~g~~~-~---~-~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~-~~~-~~~~~I~ 139 (441)
.+.+...-+||+.|.+- - | .-+.|.+|-++.+. ......|-|..|.+++.+..++++.. +.. +...+|+
T Consensus 47 k~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~----~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~ 122 (427)
T KOG1411|consen 47 KKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLAS----LSLDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIV 122 (427)
T ss_pred hcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhh----hcccchhccccchHHHHHHHHHHhhcCCchhhhcccee
Confidence 34455678999999762 1 2 23455555554443 24455899999999999999998753 222 2334444
Q ss_pred Ec--CCcHHHHHH---HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCC
Q 013521 140 IS--DGAQSDISR---LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSR 214 (441)
Q Consensus 140 ~t--~G~~~al~~---l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~ 214 (441)
.+ -++|.++.+ +...+-++..|.+++|+|.+...++...|.. ...++|.......+|.+ ++..|+...+.
T Consensus 123 tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~----~~~yrYyd~~t~gld~~-g~ledl~~~p~ 197 (427)
T KOG1411|consen 123 TVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLP----VKFYRYYDPKTRGLDFK-GMLEDLGEAPE 197 (427)
T ss_pred EEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcc----eeeeeeccccccccchH-HHHHHHhcCCC
Confidence 32 233444443 4445567889999999999999999988831 11111112222222221 22333433344
Q ss_pred ccEEEEc-CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC---CCcccccCCCcceeEEEecCCcccCC
Q 013521 215 TDIIFFC-SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS---PRSIYEIPGAREVAIEISSFSKFAGF 290 (441)
Q Consensus 215 ~~~v~i~-~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~~~ 290 (441)
-..|++- -.|||||+--+.+++++|.++.++.+.+-+.|-+|..|..++. ..++..+......++++.||.|.+|+
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGL 277 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGL 277 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcch
Confidence 4444444 3399999999999999999999999999999999998876543 23333333334667999999999999
Q ss_pred ccceeEEE--EeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-----HHHHHHHHHHHHHHHHHHH
Q 013521 291 TGVRLGWT--VVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-----QALRTVIDYYKENAKIIVD 363 (441)
Q Consensus 291 ~G~r~G~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~ 363 (441)
-|-|+|.+ +|.+... ..++..++..+....+.+++......+...+.+... ..++.+.+++...|+.+.+
T Consensus 278 YgERvGa~svvc~~ad~---A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d 354 (427)
T KOG1411|consen 278 YGERVGALSVVCKDADE---AKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFD 354 (427)
T ss_pred hhhccceeEEEecCHHH---HHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhH
Confidence 99999965 4544332 222344555566666777777777777788886543 3467788888899999999
Q ss_pred HHHhCC----CeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeC
Q 013521 364 AFQSLG----LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIP 407 (441)
Q Consensus 364 ~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p 407 (441)
.|+..| +.....+-|+|.+-.+. .+.++.+.+++.|++..
T Consensus 355 ~L~~~gs~~~W~hI~~QIGMF~fTgl~----peQv~~l~ke~~iYmT~ 398 (427)
T KOG1411|consen 355 ALEKEGSPGNWSHITKQIGMFCFTGLN----PEQVDWLTKEYHIYLTK 398 (427)
T ss_pred HhhcCCCCccHHHHHHhhheeeecCCC----HHHHHHHHhhheeeecc
Confidence 998763 33344566888876653 47788999999998853
No 257
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=2.3e-16 Score=147.34 Aligned_cols=334 Identities=16% Similarity=0.163 Sum_probs=214.4
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..|||-.|- ..+ ..+|.+++++.+.+.++.. ....|. .+.+.++|+.|.+..+ ..+.|+++|++++
T Consensus 40 ~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h--~sn~~~-----~~~~~~la~~L~~~s~-~~d~vff~NSGaE 111 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH--VSNLFY-----NEPQAELAEKLVELSP-FADRVFFCNSGAE 111 (404)
T ss_pred CCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh--cccccC-----ChHHHHHHHHHHhhCc-cccEEEEcCCcHH
Confidence 356788877664 333 4789999999998887652 122232 2355566666654334 5899999999999
Q ss_pred HHHH-H--HHhc-C-C-CCEEEEeCCCchhhHhHHHHhccccc----cccccCccceeEEeecCCCCCccCCCCCCCCcc
Q 013521 147 DISR-L--QMLL-G-S-NVTVAVQDPSFPAYIDTSVIVGQAGK----FLKETGKYRNIVYMNCRPENNFFPDLSTTSRTD 216 (441)
Q Consensus 147 al~~-l--~~l~-~-~-gd~Vlv~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~ 216 (441)
|++. + .+.. . + ..+|+....+|++-.-..-..+.+.. |.+.. -.+..+|.++-+.+...+ .+++.
T Consensus 112 A~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~---~g~~~vpfnDi~al~~ai--~~~ta 186 (404)
T COG4992 112 ANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLL---PGFRHVPFNDIEALEAAI--DEDTA 186 (404)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCC---CCceecCCCCHHHHHHHh--ccCeE
Confidence 9986 3 2233 2 2 24788888888875333322322211 11110 134444432211111001 24777
Q ss_pred EEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccce
Q 013521 217 IIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVR 294 (441)
Q Consensus 217 ~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r 294 (441)
+|++ -| |--.|+. .+++.++++.++|++||+++|.||+...+...+......++.-.|| |-++.|.+| .|+.
T Consensus 187 Aviv-EPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PD----I~tlaK~Lg-GG~P 260 (404)
T COG4992 187 AVIV-EPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPD----ILTLAKALG-GGFP 260 (404)
T ss_pred EEEE-ecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCC----EEEeecccc-CCcc
Confidence 7666 55 7777866 5778899999999999999999999998766654322333333455 445899998 9999
Q ss_pred eEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC----C-
Q 013521 295 LGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL----G- 369 (441)
Q Consensus 295 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g- 369 (441)
+|.+++.+.. .+.+..-...++++.|+++.+++.+.++--.. +.+.+..++..+++.+.|+++ +
T Consensus 261 igA~la~~~~--------~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l~~~~~~ 329 (404)
T COG4992 261 IGAMLATEEI--------ASAFTPGDHGSTFGGNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQRLRELKRRYPL 329 (404)
T ss_pred ceeeEEchhh--------hhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 9999998443 22233334445667899999888888862211 455566667777777777765 2
Q ss_pred CeeeCCCCceEEEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 370 LKVNGGKNAPYVWVQFPGS-SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
++-.. ..|.++=+++... ...++++.+.++ |+++.+. +++.||+. +..+++++++++++|++++
T Consensus 330 v~~vR-G~GLmiGiel~~~~~a~~~~~~~~~~-gvL~~~a------~~~ViR~~PpL~i~~eei~~~~~~l~~~l 396 (404)
T COG4992 330 VKEVR-GRGLMIGIELKEPYRARDIVRALREE-GVLVLPA------GPNVIRFLPPLVITEEEIDEALDALERAL 396 (404)
T ss_pred eeeee-cceeEEEEEecCcccHHHHHHHHHHC-CeEEecC------CCCeEEecCCccCCHHHHHHHHHHHHHHH
Confidence 12122 2567777777532 356666666655 9999874 35689998 5668999999999998764
No 258
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.76 E-value=6.7e-16 Score=148.88 Aligned_cols=321 Identities=14% Similarity=0.126 Sum_probs=195.5
Q ss_pred CCCCcHHHHHHHHHHHhhccCCCCCCCCCC---CcCcHHHHHHHHHHHhhhCCCC-CCcEEEcC-CcHHHHHH-HHHhcC
Q 013521 83 TQPIPDIITSAMAEHAFALSTVKGYKGYGA---EQGNMALRTAIADKFYKDMGIE-GDEIFISD-GAQSDISR-LQMLLG 156 (441)
Q Consensus 83 ~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~-G~~~al~~-l~~l~~ 156 (441)
+.+.|+.+++++.+.+.++.. .+...+.. ..-..++-+.+.+.+.+-++.+ ..+|++++ +++.+++. +..++.
T Consensus 11 P~~~p~~V~~a~~~~~~~~~~-~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~ 89 (360)
T PRK05355 11 PAMLPEEVLEQAQQELLDWNG-SGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG 89 (360)
T ss_pred CCCCCHHHHHHHHHHhhcccc-CCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC
Confidence 346789999999998755431 22222211 1122244444444444445763 34676664 55566887 788999
Q ss_pred CCCEEEEeCCCchhh--HhHHHHhccccccccccCccceeEEeecCCCCCc--cCCCCC---CCCccEEEEcCCCCcccc
Q 013521 157 SNVTVAVQDPSFPAY--IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF--FPDLST---TSRTDIIFFCSPNNPTGH 229 (441)
Q Consensus 157 ~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~--~~~~~~---~~~~~~v~i~~p~NPtG~ 229 (441)
+||++++..-+..+. .++++.+|. . ..+..++..+. .+++++ .+++++|.+++..|.||.
T Consensus 90 ~g~~~l~i~~G~fg~r~~~~a~~~g~------------~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv 156 (360)
T PRK05355 90 GGKKADYVDTGSWSKKAIKEAKKYGE------------V-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGT 156 (360)
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhCC------------c-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceE
Confidence 999999888777664 445555552 2 34433321111 222211 247899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCC
Q 013521 230 AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNG 309 (441)
Q Consensus 230 ~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~ 309 (441)
..+ .+.+| +|+++|+|.+.+-. ..+..+..+ + +++.|..|.+|.+| +|+++++++.+....
T Consensus 157 ~~~--~i~~i------~g~l~vVDavss~g---~~~idv~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~ 217 (360)
T PRK05355 157 EFH--ELPDT------GDVPLVADMSSDIL---SRPIDVSKF----G--LIYAGAQKNIGPAG--LTIVIVREDLLGRAL 217 (360)
T ss_pred ecC--ccccc------CCCcEEEEcCcccc---CccCCHHHc----c--EEEEeccccccCCc--eEEEEECHHHHhhcc
Confidence 984 25555 89999999998732 113333222 3 88999999998665 899999998864322
Q ss_pred chh--HHHHHH-HH-hhhcCCCcHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHHHHHHHHHhCCCe-eeCC---CCceE
Q 013521 310 YPV--IKDFNR-IV-CTCFNGASNIVQAGGLACLSPDGFQ-ALRTVIDYYKENAKIIVDAFQSLGLK-VNGG---KNAPY 380 (441)
Q Consensus 310 ~~~--~~~~~~-~~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~---~~~~~ 380 (441)
+.. .-.+.. .. .....+++.....+..++++.-... .++++.++.++..+++++.|+++++. ...+ .....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v 297 (360)
T PRK05355 218 PSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMN 297 (360)
T ss_pred cCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcE
Confidence 210 111111 11 1123445555544444444411112 35888899999999999999998742 2111 22345
Q ss_pred EEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 381 VWVQFPGS-SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 381 ~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
+.+.+++. ...++...+. ++|+.+.+|.. ..+.||+|+ +++.+|++.+++.|++++
T Consensus 298 ~sf~~~~~~~~~~~~~~~~-~~Gi~~~~~~~----~~g~vRiS~~~~nt~eei~~l~~~l~~~~ 356 (360)
T PRK05355 298 VPFTLADEELDKKFLAEAK-AAGLVGLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFE 356 (360)
T ss_pred EEEEcCChHHHHHHHHHHH-HCCCcccCCCC----ccCcEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 77777753 2234445544 46999877653 246899997 458999999999998863
No 259
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.76 E-value=3.2e-16 Score=143.48 Aligned_cols=310 Identities=17% Similarity=0.155 Sum_probs=189.9
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEE
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAV 163 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv 163 (441)
.+.+++.++|.++-. .+-..|+.++-...+.+.+++. ++. +.+++++++|++..+ |...++||+.|++
T Consensus 11 g~~~~m~eam~~a~~-----~~~~~YG~D~~~~~~e~~~ae~----~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~ 79 (342)
T COG2008 11 GPTPEMREALAAANA-----VGDDVYGEDPTTNALEQRIAEL----FGK--EAALFVPSGTQANQLALAAHCQPGESVIC 79 (342)
T ss_pred CCCHHHHHHHHhccc-----cCCCCCCCCHHHHHHHHHHHHH----hCC--ceEEEecCccHHHHHHHHHhcCCCCeEEE
Confidence 356778888888542 3334686666556666666655 455 788888888888777 8888999999999
Q ss_pred eCCCchhhHhH--HHHhccccccccccCccceeEEeecCC--CCCccCC-CCC--------CCCccEEEEcCCCCccccC
Q 013521 164 QDPSFPAYIDT--SVIVGQAGKFLKETGKYRNIVYMNCRP--ENNFFPD-LST--------TSRTDIIFFCSPNNPTGHA 230 (441)
Q Consensus 164 ~~p~y~~~~~~--~~~~g~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~-~~~--------~~~~~~v~i~~p~NPtG~~ 230 (441)
..-.|-...+. ...++ .+..++..+ ++.+.++ ++. ...+.++++.|.+|--|++
T Consensus 80 ~~~aHi~~~E~Ga~~~~~-------------~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV 146 (342)
T COG2008 80 HETAHIYTDECGAPEFFG-------------GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV 146 (342)
T ss_pred eccccceecccCcHHHHc-------------CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence 88877544322 22233 233344433 2222221 111 1233444444555578999
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEe-eccccccCC
Q 013521 231 ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV-PEELRYSNG 309 (441)
Q Consensus 231 ~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~-~~~~~~~~~ 309 (441)
+|.+++++|.++|++||+.+..|.+--........++...+...-| .+.-++||..+.|+ |.+++ +.++
T Consensus 147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D--~v~~~~tK~g~~~~---gAiv~gn~~~----- 216 (342)
T COG2008 147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVD--SVSFCLTKGGGAPV---GAIVFGNRDF----- 216 (342)
T ss_pred cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCC--EEEEecccCCccee---eeEEEcCHHH-----
Confidence 9999999999999999999999998543222111244545433223 45556999987665 76664 4454
Q ss_pred chhHHHHHHHHhhhcCC--CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEEEcC
Q 013521 310 YPVIKDFNRIVCTCFNG--ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWVQFP 386 (441)
Q Consensus 310 ~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 386 (441)
++++...+...... -+.+...+...+|++.-+ ...-.+-.+..+.|.+.|+.. |+++..|..++.++++++
T Consensus 217 ---~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~---~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~ 290 (342)
T COG2008 217 ---AKRARRWRKRAGGLMRKARFLAAQGLYALEDDVW---RLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLP 290 (342)
T ss_pred ---HHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECC
Confidence 45555444443332 334444555666664433 222233333488899999855 999988789999999997
Q ss_pred CCC-hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 387 GSS-SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 387 ~~~-~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
... ........+...|+.+.+++ ..+|+.. ..+++++++++..+++++
T Consensus 291 ~~~i~~l~~~~~~~~~~~~~~~~~-------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 291 ESAIEALRLAGALFYRGVLIGAHG-------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred hHHHHHHHhhchhheeeeeccCCC-------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 311 11111222223344443321 4689885 568999999999998753
No 260
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.76 E-value=3.3e-16 Score=154.68 Aligned_cols=344 Identities=11% Similarity=0.081 Sum_probs=190.7
Q ss_pred CCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhC--CCCC-CcEEE-cCC
Q 013521 71 DARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDM--GIEG-DEIFI-SDG 143 (441)
Q Consensus 71 ~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~--~~~~-~~I~~-t~G 143 (441)
++.++|+..|-. .+ ..+|.+.+++++.+........ ..+ ..+.+..+|+.+.+.. +-.. +.+++ +++
T Consensus 38 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~-----~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 111 (425)
T PRK09264 38 GKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHG-LDM-----HTTAKREFLETFEETILKPRGLDYKVQFTGPT 111 (425)
T ss_pred CCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccc-ccc-----CcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence 456788766632 22 3678999999998875321011 111 1234445555554311 1111 25656 578
Q ss_pred cHHHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCC----CccCCCC----C
Q 013521 144 AQSDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPEN----NFFPDLS----T 211 (441)
Q Consensus 144 ~~~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~----~~~~~~~----~ 211 (441)
+++|+.. + ........+|+....+|++....+........... .......+..+|..... +...+++ +
T Consensus 112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~ 191 (425)
T PRK09264 112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED 191 (425)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh
Confidence 8888875 3 22233446788899999997544433321110000 00000134444442110 0000111 1
Q ss_pred C----CCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCC
Q 013521 212 T----SRTDIIFFCSP-NNPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFS 285 (441)
Q Consensus 212 ~----~~~~~v~i~~p-~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 285 (441)
. +++.+|+ ..| +.-.|. +.|++.+++|.++|++||+++|+||++..|...+.........-.+| +.++|
T Consensus 192 ~~~~~~~~aavi-~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PD----i~t~~ 266 (425)
T PRK09264 192 SSSGVDLPAAVI-VETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPD----IVTLS 266 (425)
T ss_pred ccCCCCceEEEE-EecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCC----EEEec
Confidence 1 2345544 456 555676 56899999999999999999999999987644332211112221344 34789
Q ss_pred cccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 013521 286 KFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAF 365 (441)
Q Consensus 286 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 365 (441)
|.++..|+++|++++++++. .+.........+.++++..++.+.+.+. . .-....++.+++.+.+.+.|
T Consensus 267 K~l~~~G~pigav~~~~~i~---------~~~~~~~~~T~~gnp~~~aaa~a~l~~~-~-~~~~l~~~~~~~g~~l~~~l 335 (425)
T PRK09264 267 KSISGYGLPMALVLIKPELD---------VWKPGEHNGTFRGNNLAFVTATAALEEY-W-SDDAFEKEVKAKGELVRERL 335 (425)
T ss_pred cccCCCccceEEEEEchhhh---------ccCCCccCCCCCCCHHHHHHHHHHHHHH-H-hhhHHHHHHHHHHHHHHHHH
Confidence 99984499999999987751 1111111223345666666665666311 0 00234445555555555555
Q ss_pred Hh----CC-CeeeCCCCceEEEEEcCCCC-hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 013521 366 QS----LG-LKVNGGKNAPYVWVQFPGSS-SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRL 437 (441)
Q Consensus 366 ~~----~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l 437 (441)
++ ++ +.......|.++|+.++... ...+...+++ +||.+.+...+ ...||++. ..+++++++++++|
T Consensus 336 ~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~-~Gv~~~~~~~~----~~~lr~~p~l~~t~~ei~~~~~~l 410 (425)
T PRK09264 336 EEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFE-NGLIIETSGPE----DEVVKLLPPLTIDEEELEEGLDIL 410 (425)
T ss_pred HHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHH-CCCEEeccCCC----CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 43 22 21112235788899996422 3345555554 59999875432 36788884 46899999999999
Q ss_pred HhhC
Q 013521 438 KNFL 441 (441)
Q Consensus 438 ~~~l 441 (441)
.+++
T Consensus 411 ~~~l 414 (425)
T PRK09264 411 EEAV 414 (425)
T ss_pred HHHH
Confidence 8763
No 261
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=7.7e-16 Score=151.65 Aligned_cols=218 Identities=19% Similarity=0.200 Sum_probs=139.7
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH----HHHhccccccccccC
Q 013521 115 GNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT----SVIVGQAGKFLKETG 189 (441)
Q Consensus 115 g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~~~ 189 (441)
-...|.+.+|++. +.+ ..++++++++|+.+ +..++++||+|+++.++|.+.... +...|
T Consensus 64 ~~~~le~~lA~l~----g~~--~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G---------- 127 (427)
T PRK05994 64 TNAVLEERVAALE----GGT--AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFG---------- 127 (427)
T ss_pred cHHHHHHHHHHHh----CCC--cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcC----------
Confidence 4577888888885 433 46677777888876 677899999999999999875443 34455
Q ss_pred ccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccc
Q 013521 190 KYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY 269 (441)
Q Consensus 190 ~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~ 269 (441)
++++.++.++...+...+ .+++++|++++|+||||.+++ +++|+++|+++|+++|+|+++..... ..++
T Consensus 128 --~~v~~vd~~d~~~l~~ai--~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~---~~pl- 196 (427)
T PRK05994 128 --WQVRWADADDPASFERAI--TPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL---IRPI- 196 (427)
T ss_pred --cEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc---CCcc-
Confidence 477777654211111111 367999999999999999998 78999999999999999999973211 1112
Q ss_pred ccCCCcceeEEEecCCcccCCccceeEEEEee-ccc--cccCC--------ch-----hHHHH--------H--HHHhhh
Q 013521 270 EIPGAREVAIEISSFSKFAGFTGVRLGWTVVP-EEL--RYSNG--------YP-----VIKDF--------N--RIVCTC 323 (441)
Q Consensus 270 ~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~-~~~--~~~~~--------~~-----~~~~~--------~--~~~~~~ 323 (441)
.. +..+++.|++|.+|-+|-.+|.+++. ... ...+. .. ..+.+ . ......
T Consensus 197 ~~----gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (427)
T PRK05994 197 EH----GADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDL 272 (427)
T ss_pred cc----CCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhc
Confidence 11 23489999999998666567766653 211 00000 00 01110 0 011112
Q ss_pred cCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 324 FNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 324 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
....+++... ++ ..+.+.+..+.++.+++...+.+.|+++
T Consensus 273 G~~~~~~~A~----l~-~~~l~tL~~r~~~~~~~a~~la~~L~~~ 312 (427)
T PRK05994 273 GPAISPFNAF----LI-LTGIETLPLRMQRHSDNALAVAEWLKGH 312 (427)
T ss_pred CCCCCHHHHH----HH-HcCcccHHHHHHHHHHHHHHHHHHHHhC
Confidence 2223333321 22 2445556777888888999999999887
No 262
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=1e-15 Score=151.39 Aligned_cols=341 Identities=14% Similarity=0.083 Sum_probs=196.4
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|. ..+ ..+|.+.+++.+.+.+... .....|. .+.+..+|+.+.+..+...+.+++++++++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~~-----~~~~~~la~~l~~~~p~~~~~v~f~~sGse 113 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDH-VIFAGFT-----HEPAERLAQRLVALTPGGLDHVFFSDSGSV 113 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCC-ccccccC-----CHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 356788887663 222 3578999999998876321 0111222 234445555554323323468999999999
Q ss_pred HHHH-HH--Hhc------CCCCEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCCCc---cCCCC---
Q 013521 147 DISR-LQ--MLL------GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPENNF---FPDLS--- 210 (441)
Q Consensus 147 al~~-l~--~l~------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~~~---~~~~~--- 210 (441)
|+.. +. ... ....+|+...-+|++....+........... .......+..++....+.. ...++
T Consensus 114 A~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l 193 (423)
T PRK05964 114 AVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALL 193 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHH
Confidence 9886 42 222 1235899999999986544433322211000 0000012233333221100 01111
Q ss_pred -C-CCCccEEEEcCC--CCccccCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCC
Q 013521 211 -T-TSRTDIIFFCSP--NNPTGHAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFS 285 (441)
Q Consensus 211 -~-~~~~~~v~i~~p--~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~S 285 (441)
. .+++.+|++ .| ++..|... |.+.+++|.++|++||+++|+||++..+...+.........-.+| +.+++
T Consensus 194 ~~~~~~iaavi~-Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pD----i~~~~ 268 (423)
T PRK05964 194 EKHAGEIAAFIV-EPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPD----IMCLS 268 (423)
T ss_pred HhCCCcEEEEEE-ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCC----eeeee
Confidence 1 235556555 55 77788765 899999999999999999999999987654442211111211233 34789
Q ss_pred cccCCcc-ceeEEEEeeccccccCCchhHHHHHHH------HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Q 013521 286 KFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRI------VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENA 358 (441)
Q Consensus 286 K~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 358 (441)
|.++ .| +++|++++++++. +.+... ....+.+.++++..++.+.++.-.. +...++.++..
T Consensus 269 K~l~-gG~~p~~av~~~~~i~--------~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g 336 (423)
T PRK05964 269 KGLT-GGYLPLAATLCTAEIF--------EAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED---EPVLERVAALS 336 (423)
T ss_pred hhhh-cCcccceEEEEcHHHH--------HhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHH
Confidence 9997 55 8999999887773 333211 1112234677887777777762111 22345555555
Q ss_pred HHHHHHHHhC-CCeee--CCCCceEEEEEcCCCC----hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHH
Q 013521 359 KIIVDAFQSL-GLKVN--GGKNAPYVWVQFPGSS----SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREY 429 (441)
Q Consensus 359 ~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~ 429 (441)
+.+.+.|+++ ..... ....|..+.+.+.... ...+...++ ++||.+.+. .+.+|++. ..++++
T Consensus 337 ~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~-~~Gv~v~~~-------~~~lR~~p~l~~t~ed 408 (423)
T PRK05964 337 AGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFAL-ERGVLLRPL-------GNTIYLMPPYIITAEE 408 (423)
T ss_pred HHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHH-HCCeEEEec-------CCEEEEeCCcccCHHH
Confidence 6666666544 22111 1124666667775322 334555555 459999873 14799984 579999
Q ss_pred HHHHHHHHHhhC
Q 013521 430 ISEACRRLKNFL 441 (441)
Q Consensus 430 ~~~~l~~l~~~l 441 (441)
+++++++|++++
T Consensus 409 Id~~v~~l~~al 420 (423)
T PRK05964 409 LDRITDAIVEVA 420 (423)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 263
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.74 E-value=7.8e-17 Score=138.79 Aligned_cols=160 Identities=19% Similarity=0.166 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhH-hHHHHhccccccccccCcccee
Q 013521 117 MALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYI-DTSVIVGQAGKFLKETGKYRNI 194 (441)
Q Consensus 117 ~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~~~~~~~~~~v 194 (441)
.++++.+++++ +.+++++++++|+++++.+ +..+.++|++|+++.++|++.. ..+...| .++
T Consensus 3 ~~~~~~l~~~~----~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g------------~~~ 66 (170)
T cd01494 3 EELEEKLARLL----QPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAG------------AKP 66 (170)
T ss_pred HHHHHHHHHHc----CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcC------------CEE
Confidence 57888999886 4678899999999999998 5667788999999999999988 6666666 578
Q ss_pred EEeecCCCCCccCC---C---CCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcc
Q 013521 195 VYMNCRPENNFFPD---L---STTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSI 268 (441)
Q Consensus 195 ~~v~~~~~~~~~~~---~---~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~ 268 (441)
..++.+..+....+ + ...++++++++++|+||+|..++ .++|.++|+++|+++|+|++|..+......
T Consensus 67 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~--- 140 (170)
T cd01494 67 VPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG--- 140 (170)
T ss_pred EEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc---
Confidence 88887654333221 1 12468899999999999999998 588888999999999999999976654311
Q ss_pred cccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 269 YEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 269 ~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
.... ..+.++++.|++|.++ + .++|+++++
T Consensus 141 ~~~~-~~~~d~~~~s~~K~~~-~-~~~G~l~~~ 170 (170)
T cd01494 141 VLIP-EGGADVVTFSLHKNLG-G-EGGGVVIVK 170 (170)
T ss_pred cccc-cccCCEEEEEcccccC-C-CceEEEEeC
Confidence 1111 1234589999999997 3 789999863
No 264
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.74 E-value=1.8e-15 Score=147.52 Aligned_cols=296 Identities=14% Similarity=0.097 Sum_probs=187.2
Q ss_pred cHHHHHHHHHHHhhhCCCCC-CcEEEcCCcH-HHHHHHHHhcC----CCCEEEEeCCCchhhHhHHHHhccccccccccC
Q 013521 116 NMALRTAIADKFYKDMGIEG-DEIFISDGAQ-SDISRLQMLLG----SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETG 189 (441)
Q Consensus 116 ~~~lr~~ia~~l~~~~~~~~-~~I~~t~G~~-~al~~l~~l~~----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 189 (441)
...+.+.+.+++.+.+|++. +..++++|+| .++.+.+..++ +||+|+++.-+|.+....+..+|
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G---------- 172 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAG---------- 172 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcC----------
Confidence 45555566665555457652 4588888888 46665433344 58999999999999999999999
Q ss_pred ccceeEEeecC-CCCCccCCCCC-----CC---CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccc
Q 013521 190 KYRNIVYMNCR-PENNFFPDLST-----TS---RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYI 260 (441)
Q Consensus 190 ~~~~v~~v~~~-~~~~~~~~~~~-----~~---~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~ 260 (441)
++++.++.. +++.+..|.+. .+ +..++++++|+ |+.....+++++|.++|++||+++|+|++|+...
T Consensus 173 --~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~ 248 (444)
T TIGR03531 173 --FEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQS 248 (444)
T ss_pred --CeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcC
Confidence 588888852 23455555432 12 55666666665 5555566779999999999999999999999422
Q ss_pred cCCCCCccc--ccCCCcceeEEEecCCcccCCccceeEEEE-eeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHH
Q 013521 261 TDPSPRSIY--EIPGAREVAIEISSFSKFAGFTGVRLGWTV-VPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLA 337 (441)
Q Consensus 261 ~~~~~~~~~--~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 337 (441)
.. ...+. ... ...-.+++.|++|.+.+||. |+++ ++++.+ .+.+..... ....+.+.|.+...
T Consensus 249 ~~--~~~~~~~g~~-~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el-------~~~i~~~y~--g~~~~s~~~~~~~~ 314 (444)
T TIGR03531 249 NK--YMELINKAIK-VGRVDAVVSSTDKNFMVPVG--GAIIYSFDENF-------IQEISKSYP--GRASASPSLDVLIT 314 (444)
T ss_pred hh--hhhhhhcccc-ccCCCeEEEeCccCCCCCCC--EEEEEECCHHH-------HHHHHHhcc--CCCCChHHHHHHHH
Confidence 11 11110 111 00114778899999987775 5544 644332 333333211 12244567776666
Q ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCC-CceEEEEEcC---CCChHHHHHHHHHhcCe----EE
Q 013521 338 CLSPDGFQALRTVIDYYKENAKIIVDAFQSL----GLKVNGGK-NAPYVWVQFP---GSSSWDVFAEILEKTHI----LT 405 (441)
Q Consensus 338 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~-~~~~~~~~~~---~~~~~~~~~~ll~~~gi----~v 405 (441)
++. .+.+.++++.+++.++++++.+.|+++ |.++...+ +..-+-+.+. +.+...+-..|..+ +| .|
T Consensus 315 ll~-~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~-~v~g~r~v 392 (444)
T TIGR03531 315 LLS-LGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSR-RVTGPRVV 392 (444)
T ss_pred HHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhC-CCCCceee
Confidence 665 556788999999999999999998865 66665432 3233444443 33444555555544 55 24
Q ss_pred eCCC-------Cc---CCCC----CCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 406 IPGS-------GF---GPGG----NEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 406 ~pg~-------~f---~~~~----~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.||. .| +... ..++-++ ++.+.+|++.++++|.+.+
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 393 TNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred cCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 5666 33 2111 1244444 3558999999999998864
No 265
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=9.4e-16 Score=150.76 Aligned_cols=156 Identities=15% Similarity=0.205 Sum_probs=116.3
Q ss_pred cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHH----hcccccccccc
Q 013521 114 QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVI----VGQAGKFLKET 188 (441)
Q Consensus 114 ~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~~ 188 (441)
+-..++++.+|++. +.+ ..++|+++++|+++ +..++++||+|+++...|.+....+.. .|
T Consensus 64 p~~~~le~~lA~l~----g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~G--------- 128 (433)
T PRK08134 64 PTVAVLEERVAALE----GGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFG--------- 128 (433)
T ss_pred hHHHHHHHHHHHHh----CCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCC---------
Confidence 34688899999886 433 46889999999997 677789999999999999876554432 45
Q ss_pred CccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcc
Q 013521 189 GKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSI 268 (441)
Q Consensus 189 ~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~ 268 (441)
+++++++.++.+.+...+ .+++++|++.+|+||||.+.+ +++|+++|+++|+++|+|.++..... ..++
T Consensus 129 ---i~v~~vd~~d~~~l~~~i--~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~---~~pl 197 (433)
T PRK08134 129 ---IETTFVKPGDIDGWRAAI--RPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL---LRPF 197 (433)
T ss_pred ---eEEEEECCCCHHHHHHhc--CCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc---CCch
Confidence 578888764211111111 368999999999999999999 88999999999999999999873221 1222
Q ss_pred cccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 269 YEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 269 ~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
.+ +..+++.|.+|.++.+|-.+|.+++
T Consensus 198 -~~----GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 198 -EH----GADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred -hc----CCCEEEeccccccCCCCCceEEEEE
Confidence 22 2349999999999877777777665
No 266
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.74 E-value=7.7e-16 Score=140.79 Aligned_cols=336 Identities=15% Similarity=0.136 Sum_probs=226.2
Q ss_pred CCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCCCCCCC--CCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH
Q 013521 72 ARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTVKGYKG--YGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 72 ~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~~~~~~--Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al 148 (441)
+++--.+++++ .+.-.|.+.+|+.+.+.+.+...+..+ -+...-...|.+++|+. +.++..+++++=--..=
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~L-----HqK~aALlFsSCfVAND 245 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADL-----HQKEAALLFSSCFVAND 245 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHH-----hcCcceeeeeeeeeccc
Confidence 34445556664 456789999999999998763222211 22344557788888887 34444555444333222
Q ss_pred HHHHHh--cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCC
Q 013521 149 SRLQML--LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPN 224 (441)
Q Consensus 149 ~~l~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~ 224 (441)
..|+.| .-||.+|...+-.+.+....++..+. .-..+..++-+.+...++. ...+|+|-.-+.+
T Consensus 246 stLftLak~lpgcei~SD~gNHASMI~GIrns~v------------~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVh 313 (570)
T KOG1360|consen 246 STLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRV------------PKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVH 313 (570)
T ss_pred hHHHHHHHHCCCcEEeccccchHHHHHHhhhcCC------------cceeeccCCHHHHHHHHHhCCCCCCceEEEeeee
Confidence 234444 35899999999999999888888773 3333333321111111222 3568888888999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC-CcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 225 NPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG-AREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 225 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
..+|.+-| +++|++++++||.+.+.||+|.--.|+.....+.+-++ .+...|+-|++.|.||+-| ||+.+...
T Consensus 314 SM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~~ 387 (570)
T KOG1360|consen 314 SMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATRK 387 (570)
T ss_pred ccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhhh
Confidence 99999999 89999999999999999999987666554444444333 2344589999999999888 99999888
Q ss_pred ccccCCchhHHHHHHHHhhhcCC--CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEE
Q 013521 304 LRYSNGYPVIKDFNRIVCTCFNG--ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYV 381 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 381 (441)
+ ++.++.+.....++ .+++....++.+.+-..-..-+.+|...+++.+++.+.|.+.|+.+.+. ...++
T Consensus 388 L--------vDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~-pSHIi 458 (570)
T KOG1360|consen 388 L--------VDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPN-PSHII 458 (570)
T ss_pred H--------HHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccCC-Cccee
Confidence 8 46676665543333 3344444445444311111125667788888999999999999999864 56677
Q ss_pred EEEcCC-CChHHHHHHHHHhcCeEEeCCCCcC-CCCCCeEEEEe--ecCHHHHHHHHHHHHh
Q 013521 382 WVQFPG-SSSWDVFAEILEKTHILTIPGSGFG-PGGNEHIRVSA--FGHREYISEACRRLKN 439 (441)
Q Consensus 382 ~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~~iRls~--~~~~~~~~~~l~~l~~ 439 (441)
-+.+.+ ....+....|+.++||+|..-.+-. +.|...+||+= ..+++.++.+++.|..
T Consensus 459 Pv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~ 520 (570)
T KOG1360|consen 459 PVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLD 520 (570)
T ss_pred eeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHH
Confidence 777752 3445677889999999998755332 44677899983 4477888888777754
No 267
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=3.2e-15 Score=146.80 Aligned_cols=221 Identities=14% Similarity=0.156 Sum_probs=139.9
Q ss_pred cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHH-hccccccccccCcc
Q 013521 114 QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVI-VGQAGKFLKETGKY 191 (441)
Q Consensus 114 ~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~ 191 (441)
+-...|.+.+|++. +. +..++++++++|+.+ +..++++||+|++....|.+....+.. +...|
T Consensus 69 p~~~~Le~~lA~l~----g~--~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~G--------- 133 (436)
T PRK07812 69 PTQDVVEQRIAALE----GG--VAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLG--------- 133 (436)
T ss_pred chHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCe---------
Confidence 34568888888875 43 345666677778886 788899999999999999876554432 11111
Q ss_pred ceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccc
Q 013521 192 RNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY 269 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~ 269 (441)
++++.++ +.. + ..++++ .+++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|+++..... ..++
T Consensus 134 i~v~~vd-d~~-d-~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~---~~pl- 203 (436)
T PRK07812 134 IEVSFVE-DPD-D-LDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL---IRPL- 203 (436)
T ss_pred EEEEEEC-CCC-C-HHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc---CCch-
Confidence 4666664 221 1 111221 368899999999999999999 88999999999999999998863111 1122
Q ss_pred ccCCCcceeEEEecCCcccCCccceeEEEEeeccccc---cC-------Cc-------------hh-HHHHHHHHhhhcC
Q 013521 270 EIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRY---SN-------GY-------------PV-IKDFNRIVCTCFN 325 (441)
Q Consensus 270 ~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~---~~-------~~-------------~~-~~~~~~~~~~~~~ 325 (441)
.. +..+++.|++|.+|..|--+|.+++...... .. .+ .. .+...........
T Consensus 204 ~~----GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 279 (436)
T PRK07812 204 EH----GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGS 279 (436)
T ss_pred hc----CCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCC
Confidence 11 2348889999999877666777776432110 00 00 00 0111111222233
Q ss_pred CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 326 GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 326 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
..+++.. .-++ .+.+-+..+.++..++...+.+.|+++
T Consensus 280 ~l~p~~a---~l~~--rgl~tL~~R~~~~~~nA~~la~~L~~~ 317 (436)
T PRK07812 280 AISPFNA---FLIA--QGLETLSLRIERHVANAQRVAEFLEAR 317 (436)
T ss_pred CCCHHHH---HHHh--cCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444432 1222 345556777888889999999999987
No 268
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.73 E-value=2.4e-15 Score=149.13 Aligned_cols=341 Identities=11% Similarity=0.048 Sum_probs=197.2
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC--CCc-EEEcCC
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE--GDE-IFISDG 143 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~--~~~-I~~t~G 143 (441)
.++.++|+..|.. .+ ..+|.+.+++.+.+..... ....+.+ .+.+..+|+.|....+-. ... ++++++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~--~~~~~~~----~~~~~~lae~L~~~~p~~~~~~~~~f~~~s 110 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLP--LHTLDLT----TPLKDAFIEALLNIIPKRKMDYKLQFPGPS 110 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccC--ccccccC----cHHHHHHHHHHHHhCCCcCCCccEEEeCCC
Confidence 3567888876642 22 3678999999998875210 1111112 244555566554322211 134 455678
Q ss_pred cHHHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHhcc-c---cccccccCccceeEEeecCCCCCc-----------
Q 013521 144 AQSDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQ-A---GKFLKETGKYRNIVYMNCRPENNF----------- 205 (441)
Q Consensus 144 ~~~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~-~---~~~~~~~~~~~~v~~v~~~~~~~~----------- 205 (441)
+++|... + .........|+....+|++....+..... . ..+.+.. ..+..++.......
T Consensus 111 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 111 GADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLM---PGVQFMPYPHEYRCPFGIGGEAGSN 187 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCC---CCcEEeCCCccccccccCCchhHHH
Confidence 8888875 3 22233446799999999997655544321 0 0000000 12223332111000
Q ss_pred ---------cCCCCC-CCCccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCC
Q 013521 206 ---------FPDLST-TSRTDIIFFCSP-NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGA 274 (441)
Q Consensus 206 ---------~~~~~~-~~~~~~v~i~~p-~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~ 274 (441)
..+++. ..++.++++... +|+.....|++.+++|.++|++||+++|.||++..|...+.......+.-.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~ 267 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIE 267 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCC
Confidence 000011 135666666533 455445689999999999999999999999999988665543333333323
Q ss_pred cceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 013521 275 REVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYY 354 (441)
Q Consensus 275 ~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 354 (441)
|| +++ +||.++ .|+++|+++++++. . .+.......+.+.+++++.++.+.|+.-.. +.+.+..
T Consensus 268 PD--iv~--~gK~l~-~G~Pigav~~~~~~-~--------~~~~~~~~~T~~gnpla~aaa~a~L~~i~~---~~l~~~~ 330 (442)
T TIGR00709 268 PD--FVV--MSKAVG-GGLPLAVLLIAPEF-D--------AWQPAGHTGTFRGNQLAMVTGTEALNYWKD---DNLAQNA 330 (442)
T ss_pred Cc--EEE--Eccccc-CCcccEEEEEchHH-h--------ccCCCcCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHH
Confidence 45 333 899998 69999999998763 1 111111224455789999999998862111 3445566
Q ss_pred HHHHHHHHHHHHhC----CCeeeCCCCceEEEEEcCCCC---------------hHHHHHHHHHhcCeEEeCCCCcCCCC
Q 013521 355 KENAKIIVDAFQSL----GLKVNGGKNAPYVWVQFPGSS---------------SWDVFAEILEKTHILTIPGSGFGPGG 415 (441)
Q Consensus 355 ~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ll~~~gi~v~pg~~f~~~~ 415 (441)
+++.+++.+.|+++ ++....-.-|.++-+++.... ...+...++ ++||.+.+... .
T Consensus 331 ~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~----~ 405 (442)
T TIGR00709 331 QERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGLLLETGGR----E 405 (442)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCeEEeecCC----C
Confidence 66777777777653 221111124666666663110 122334444 56999976421 2
Q ss_pred CCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 416 NEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 416 ~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.+.||+. +..+++++++++++|.+++
T Consensus 406 ~~~l~~~Ppl~it~~ei~~~~~~l~~~l 433 (442)
T TIGR00709 406 GEVFRLLCPITIDQEECEEGISRFKQAV 433 (442)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 4678887 4568999999999998764
No 269
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.73 E-value=6.7e-15 Score=145.21 Aligned_cols=192 Identities=17% Similarity=0.176 Sum_probs=129.6
Q ss_pred eEEeCCCCCCCCCc-----HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH
Q 013521 74 LIRLGIGDTTQPIP-----DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 74 ~i~l~~g~~~~~~~-----~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al 148 (441)
+..|+.|.++.|.. +...+++.+.+. .....+++ -..++++++|+++ +. +++++++|+++++
T Consensus 25 ~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~-----~~~~~~G~--~~~~fe~~lA~~~----g~--~~~v~~~sGt~al 91 (438)
T PRK15407 25 PKPFVPGKSPIPPSGKVIDAKELQNLVDASL-----DFWLTTGR--FNDAFEKKLAEFL----GV--RYALLVNSGSSAN 91 (438)
T ss_pred cccccCCCCCCCcCccCCCHHHHHHHHHHHH-----hCcccCCh--hHHHHHHHHHHHh----CC--CeEEEECCHHHHH
Confidence 34578888765532 333344444443 22222322 3578999999997 43 4788999888888
Q ss_pred HH-HHHh---------cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CC
Q 013521 149 SR-LQML---------LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TS 213 (441)
Q Consensus 149 ~~-l~~l---------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~ 213 (441)
.+ +..+ ++|||+|+++.|+|+.+...+...| .+++.++++.+ .+..|++. .+
T Consensus 92 ~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G------------~~pv~vdvd~~-~~~id~~~le~~i~~ 158 (438)
T PRK15407 92 LLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNG------------LVPVFVDVELP-TYNIDASLLEAAVSP 158 (438)
T ss_pred HHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcC------------CEEEEEecCCC-cCCcCHHHHHHHcCc
Confidence 76 5443 4899999999999999998888888 58888888653 33334321 46
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecC--CcccCCc
Q 013521 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSF--SKFAGFT 291 (441)
Q Consensus 214 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~--SK~~~~~ 291 (441)
++++|+++++ +|... ++++|.++|++||++||+|++++...... ...+..+. + +.+.|| +|.+. .
T Consensus 159 ~tkaVi~~~~---~G~p~---dl~~I~~la~~~gi~vIeDaa~a~G~~~~-g~~~G~~g---d--~~~fSf~~~k~~~-~ 225 (438)
T PRK15407 159 KTKAIMIAHT---LGNPF---DLAAVKAFCDKHNLWLIEDNCDALGSTYD-GRMTGTFG---D--IATLSFYPAHHIT-M 225 (438)
T ss_pred CCeEEEEeCC---CCChh---hHHHHHHHHHHCCCEEEEECccchhhhcC-CeeeeccC---c--eEEEeCCCCCCcc-c
Confidence 8899998764 44433 48999999999999999999998533211 12232331 2 556666 46665 4
Q ss_pred cceeEEEEeecccc
Q 013521 292 GVRLGWTVVPEELR 305 (441)
Q Consensus 292 G~r~G~l~~~~~~~ 305 (441)
|- -|+++++++.+
T Consensus 226 ge-GG~l~t~d~~l 238 (438)
T PRK15407 226 GE-GGAVFTNDPLL 238 (438)
T ss_pred cC-ceEEEECCHHH
Confidence 43 49999988775
No 270
>PRK06541 hypothetical protein; Provisional
Probab=99.72 E-value=8.3e-15 Score=145.48 Aligned_cols=341 Identities=12% Similarity=0.093 Sum_probs=199.8
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|- ..+ ..+|.+.+++.+.+.+.... ....|. .+.+..+|+.+.+..+-..+.+++++++++
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~-~~~~~~-----~~~~~~la~~l~~~~p~~~~~v~f~~sGse 123 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFF-PLWSYA-----HPPAIELAERLAALAPGDLNRVFFTTGGSE 123 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCc-cccccC-----CHHHHHHHHHHHHhCCCCcCEEEEcCCcHH
Confidence 456788887663 222 36789999999998764210 111221 233444555554322333469999999999
Q ss_pred HHHH-HH--Hhc----C--CCCEEEEeCCCchhhHhHHHHhccccc----cccccCccceeEEeecCCCCC---ccC---
Q 013521 147 DISR-LQ--MLL----G--SNVTVAVQDPSFPAYIDTSVIVGQAGK----FLKETGKYRNIVYMNCRPENN---FFP--- 207 (441)
Q Consensus 147 al~~-l~--~l~----~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~v~~v~~~~~~~---~~~--- 207 (441)
|+.. +. ... + ...+|+...-+|++....+........ +.+.. ..+..+|...... +..
T Consensus 124 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~ 200 (460)
T PRK06541 124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLV---PGGFRVPNTNFYRAPELGDDPE 200 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCC---CCcEEeCCCccccccccCCCHH
Confidence 9885 42 222 1 246889999999987544433221100 00000 1222232211000 000
Q ss_pred --------CCCC-----CCCccEEEEcCC-CCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccC
Q 013521 208 --------DLST-----TSRTDIIFFCSP-NNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIP 272 (441)
Q Consensus 208 --------~~~~-----~~~~~~v~i~~p-~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~ 272 (441)
.++. .++..+.++..| +++.|.+.+ .+.+++|.++|++||+++|.||++..|...+.......+.
T Consensus 201 ~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~g 280 (460)
T PRK06541 201 AFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFG 280 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcC
Confidence 1111 123345566688 999998764 9999999999999999999999997664322211121222
Q ss_pred CCcceeEEEecCCcccCCccc-eeEEEEeeccccccCCchhHHHHHHH----HhhhcCCCcHHHHHHHHHhcCCCcHHHH
Q 013521 273 GAREVAIEISSFSKFAGFTGV-RLGWTVVPEELRYSNGYPVIKDFNRI----VCTCFNGASNIVQAGGLACLSPDGFQAL 347 (441)
Q Consensus 273 ~~~~~~i~i~S~SK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 347 (441)
-.+| ++ +|||.++ .|+ ++|+++++++++ +.+... ......+.++++..++.+.++.-. -
T Consensus 281 v~PD--iv--t~gK~l~-~G~~pigav~~~~~i~--------~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~---~ 344 (460)
T PRK06541 281 YVPD--II--TCAKGIT-SGYSPLGAMIASDRLF--------EPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFE---R 344 (460)
T ss_pred CCCC--EE--Eeccccc-CCccceeEEEEcHHHH--------HHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHH---h
Confidence 1244 32 5999998 887 999999998874 333211 111234467777777777775211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-C--C-eeeCCCCceEEEEEcCCC-------Ch--------HHHHHHHHHhcCeEEeCC
Q 013521 348 RTVIDYYKENAKIIVDAFQSL-G--L-KVNGGKNAPYVWVQFPGS-------SS--------WDVFAEILEKTHILTIPG 408 (441)
Q Consensus 348 ~~~~~~~~~~~~~l~~~L~~~-g--~-~~~~~~~~~~~~~~~~~~-------~~--------~~~~~~ll~~~gi~v~pg 408 (441)
+...++.+++.+++.+.|+++ . + .... ..|.++-+++... .. ..+...++ ++||.+.+.
T Consensus 345 ~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vr-g~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~ 422 (460)
T PRK06541 345 EGLLDHVRDNEPAFRATLEKLLDLPIVGDVR-GDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALF-EAGLYCRAD 422 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEE-ecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH-hCCeEEEec
Confidence 345677778888888888765 2 2 1122 2466666665310 00 12334555 459999873
Q ss_pred CCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 409 SGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 409 ~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
+.+.+.+||+- ..+++++++++++|.+++
T Consensus 423 ----~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l 453 (460)
T PRK06541 423 ----DRGDPVVQLAPPLISGQEEFDEIEQILRSVL 453 (460)
T ss_pred ----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 12346899995 468999999999998764
No 271
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=2.5e-15 Score=144.99 Aligned_cols=211 Identities=11% Similarity=0.143 Sum_probs=144.6
Q ss_pred cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHH----Hhcccccccccc
Q 013521 114 QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSV----IVGQAGKFLKET 188 (441)
Q Consensus 114 ~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~~~ 188 (441)
+-...|.+.+|+.- ..+..++++++++|++. +..++++||+|++....|.+....+. ..|
T Consensus 62 Pt~~~le~~la~LE------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~G--------- 126 (395)
T PRK08114 62 LTHFSLQEAMCELE------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLG--------- 126 (395)
T ss_pred hhHHHHHHHHHHHh------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcC---------
Confidence 34566777777642 24677888889999997 77889999999999999988776653 334
Q ss_pred CccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHc--CcEEEEcccccccccCCCCC
Q 013521 189 GKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKAN--GSIIVYDSAYAAYITDPSPR 266 (441)
Q Consensus 189 ~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~--~~~ii~De~~~~~~~~~~~~ 266 (441)
+++..++..+...+...+ .+++++|++.+|.||||.+.+ +++|+++|+++ |+++++|.+++.-.. -.|
T Consensus 127 ---i~v~~vd~~d~~~l~~~l--~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~p- 196 (395)
T PRK08114 127 ---VTTTWFDPLIGADIAKLI--QPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKA- 196 (395)
T ss_pred ---cEEEEECCCCHHHHHHhc--CCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc-cCH-
Confidence 477777643221221111 357899999999999999999 99999999998 499999999974111 001
Q ss_pred cccccCCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHH
Q 013521 267 SIYEIPGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQ 345 (441)
Q Consensus 267 ~~~~~~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 345 (441)
.. .+..+++.|.+|.++-++ .-.|.++.+++. .+.+...........++... ++...+.+
T Consensus 197 --l~----~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~--------~~~l~~~~~~~G~~~~p~~a-----~l~~rgl~ 257 (395)
T PRK08114 197 --LD----FGIDISIQAGTKYLVGHSDAMIGTAVANARC--------WEQLRENSYLMGQMVDADTA-----YMTSRGLR 257 (395)
T ss_pred --HH----cCCcEEEEcCcccccCCCcceeEEEEcCHHH--------HHHHHHHHHhccCCCCHHHH-----HHHHcCCC
Confidence 11 233599999999776443 577877666544 23344333333334444442 22224455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Q 013521 346 ALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 346 ~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
.+.-+.++..++...+.+.|+++
T Consensus 258 TL~lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 258 TLGVRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC
Confidence 56777888899999999999987
No 272
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.71 E-value=5.7e-15 Score=144.22 Aligned_cols=333 Identities=13% Similarity=0.074 Sum_probs=193.8
Q ss_pred CCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..|. ..+ ..+|.+.+++.+.+.+... .+ .....+....+|+++.+.. ..+.+++++++++|
T Consensus 35 G~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~-----~~--~~~~~~~~~~la~~l~~~~--~~~~v~f~~SGseA 105 (395)
T PRK03715 35 GKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLIN-----PS--PAFYNEPMAKLAGLLTQHS--CFDKVFFANSGAEA 105 (395)
T ss_pred CCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccc-----cc--ccccCHHHHHHHHHHhhcc--CCCEEEEeCCcHHH
Confidence 46788887653 112 2478899999998865321 11 1123456778888875422 24689999999999
Q ss_pred HHH-HHHhc------CCC-CEEEEeCCCchhhHhHHHH-hccccccccccCccceeEEeecCCCCCccCCCCC--CCCcc
Q 013521 148 ISR-LQMLL------GSN-VTVAVQDPSFPAYIDTSVI-VGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTD 216 (441)
Q Consensus 148 l~~-l~~l~------~~g-d~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~ 216 (441)
... +.... ++| ..|+..+.+|++....... .+..............+...+.. + ..+++. .+++.
T Consensus 106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---d-~~~l~~~l~~~~a 181 (395)
T PRK03715 106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELN---D-IASVEKLITDKTV 181 (395)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCc---h-HHHHHHHcCCCce
Confidence 886 42221 123 5788888889886433332 23111000000000011111111 1 011111 13566
Q ss_pred EEEEcCCCCccccCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcccee
Q 013521 217 IIFFCSPNNPTGHAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRL 295 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~ 295 (441)
+|++...++..|... |.+.+++|.++|++||+++|.||++..|...+.......+.-.+| +.+++|.+| .|+.+
T Consensus 182 avi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD----i~t~gK~lg-~G~p~ 256 (395)
T PRK03715 182 AVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD----IMTLGKGIG-GGVPL 256 (395)
T ss_pred EEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc----eeeehhhhh-CCcce
Confidence 655543366667664 689999999999999999999999997543332111112221244 357899998 78999
Q ss_pred EEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC----CCe
Q 013521 296 GWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL----GLK 371 (441)
Q Consensus 296 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~ 371 (441)
|.+++++++. .+.......+.+.++++..++.+.++.-.. +++.++.+++.+++.+.|+++ ++.
T Consensus 257 ~av~~~~~i~---------~~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~ 324 (395)
T PRK03715 257 AALLAKAEVA---------VFEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLE 324 (395)
T ss_pred EEEEEccccc---------cccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcC
Confidence 9999888762 111111122334567777777777752111 345566666667777766643 443
Q ss_pred eeCCCCceEEEEEcCCCChHHHHHHHHHhc---CeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 372 VNGGKNAPYVWVQFPGSSSWDVFAEILEKT---HILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
... ..|..+-+.+....... +...+.+. ||.+.+. ..+.+||+. ..+++++++++++|.+++
T Consensus 325 ~vr-G~Glm~~i~l~~~~~~~-~~~~~~~~~~~Gi~~~~~------~~~~lR~~p~l~~t~~ei~~~~~~l~~~l 391 (395)
T PRK03715 325 GER-GEGLLRALLLGKDIGPQ-IVEKARDMQPDGLLLNAP------RPNLLRFMPALNVTTEEIDQMIAMLRSVL 391 (395)
T ss_pred eEE-cceeEEEEEecCchHHH-HHHHHHhccCCCEEEeec------CCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 222 24677777775321222 23333344 9998653 235799995 558999999999998763
No 273
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.71 E-value=2.5e-15 Score=132.57 Aligned_cols=321 Identities=17% Similarity=0.181 Sum_probs=202.0
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHH
Q 013521 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQM 153 (441)
Q Consensus 74 ~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~ 153 (441)
.+||-+..... |..+..++|.++.-. ... |+.+.....|.+.+|+.. | +..-+++++|++..+-.++.
T Consensus 23 ~vDLRSDTvT~-PTdeMr~am~eA~vg----DdV--yGeD~tt~rLE~~vA~l~----G-KEAgLFv~SGTmgNllaIm~ 90 (384)
T KOG1368|consen 23 SVDLRSDTVTV-PTDEMRRAMAEASVG----DDV--YGEDPTTNRLEQRVAELF----G-KEAGLFVPSGTMGNLLAIMV 90 (384)
T ss_pred ccccccccccC-ChHHHHHHHhhcccC----ccc--ccCCccHHHHHHHHHHHh----C-ccceeeecccccccHHHHHH
Confidence 46666555433 346667777775432 334 556677889999999985 4 45578899999988776655
Q ss_pred h-cCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccC-CCCC----------CCCccEEEEc
Q 013521 154 L-LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFP-DLST----------TSRTDIIFFC 221 (441)
Q Consensus 154 l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~-~~~~----------~~~~~~v~i~ 221 (441)
. -.+|.+|++.+.+|--..+.....-..| +.+..+...+++-+.+ +++. .+.+++|.+-
T Consensus 91 Hc~~rg~eii~gd~~HI~~~E~gg~s~l~g---------v~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclE 161 (384)
T KOG1368|consen 91 HCHQRGSEIIVGDRAHIHRYEQGGISQLAG---------VHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLE 161 (384)
T ss_pred HhcCCCceEEeccchheeehhccChhhhcc---------ceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEee
Confidence 4 4799999998877733222211111101 3455555443332221 1221 2568999998
Q ss_pred CCCCccc-cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEE-E
Q 013521 222 SPNNPTG-HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT-V 299 (441)
Q Consensus 222 ~p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l-~ 299 (441)
|-||-+| .++|.+++.+|.+||++||+.+..|.+--+........++..+....|-+- -.|||.+|.| +|-+ +
T Consensus 162 NT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVs--iCLSKglgAP---VGSViV 236 (384)
T KOG1368|consen 162 NTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVS--ICLSKGLGAP---VGSVIV 236 (384)
T ss_pred ccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhh--hhhhccCCCC---cccEEE
Confidence 8877676 999999999999999999999999998664333333445554433334322 2489999855 6754 5
Q ss_pred eeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCC-C
Q 013521 300 VPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLS-PDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGG-K 376 (441)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~ 376 (441)
+|.+++ +....++.....+.-.....+++++.. ++.+ ...+.-.++...+.+.++.. ++++..+ -
T Consensus 237 G~k~FI--------~kA~~~RKalGGGmRQsGvLaaaaLval~~~~----~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~ 304 (384)
T KOG1368|consen 237 GSKDFI--------DKARHFRKALGGGMRQSGVLAAAALVALDENV----PLLRADHKRAKELAEYINTPEEIRVEVPAV 304 (384)
T ss_pred ccHHHH--------HHHHHHHHHhcCchhHHHHHHHHHHHHhhcch----HHHHHHHHHHHHHHHHhccccceeeecchh
Confidence 677774 444444444444433333333333332 1222 23445556677777777776 3776544 4
Q ss_pred CceEEEEEcC--CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee--cCHHHHHHHHHHHHh
Q 013521 377 NAPYVWVQFP--GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF--GHREYISEACRRLKN 439 (441)
Q Consensus 377 ~~~~~~~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~~~~~~l~~l~~ 439 (441)
..+++.+.+. +.+.+++...+ ++.||.+.+|..+ .+|+.+. .++++++..+..+.+
T Consensus 305 etNiv~~~l~q~~~~~~~l~~~~-~k~gi~lm~~~s~------r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 305 ETNIVNMVLCQARLTAEELCKFL-EKNGILLMGGASR------RIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred hcceeeeecccccCCHHHHHHHH-HHCCeEEeecccc------ceEEEEEEecCHHHHHHHHHHHHH
Confidence 6778777764 55666676665 5569999987643 4899984 388999999888843
No 274
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.71 E-value=7.8e-15 Score=144.36 Aligned_cols=339 Identities=13% Similarity=0.093 Sum_probs=197.6
Q ss_pred CCCCeEEeCCC--CCCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIG--DTTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g--~~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..| ...+ ..+|.+.+++.+.+.+.. ....|... +.+..+|+.|....+-..+.+++++++++
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~---~~~~~~~~----~~~~~lAe~L~~~~p~~~~~v~f~~SGsE 145 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQP---LHSQELLD----PLRALLAKTLAALTPGKLKYSFFCNSGTE 145 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCC---CcccccCC----HHHHHHHHHHHHhCCCCcCEEEEeCCchH
Confidence 35678888766 3333 367899999999887643 22223223 33444555543322323367999999999
Q ss_pred HHHH-H--HHhc---CCCCEEEEeCCCchhhHhHHHHhccccc----cccccCccceeEEeecCCCCCccCCCC----CC
Q 013521 147 DISR-L--QMLL---GSNVTVAVQDPSFPAYIDTSVIVGQAGK----FLKETGKYRNIVYMNCRPENNFFPDLS----TT 212 (441)
Q Consensus 147 al~~-l--~~l~---~~gd~Vlv~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~v~~v~~~~~~~~~~~~~----~~ 212 (441)
|... + .... .....|+....+|++....+.....+.. +.+.. ..+..+|..+.......++ ..
T Consensus 146 A~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~---~~~~~~p~~d~~~~~~~l~~~~~~~ 222 (442)
T TIGR03372 146 SVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLL---PGFHHVAFGDIEAMLKALNECKKTG 222 (442)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCC---CCCEEeCCCCHHHHHHHHHHHhcCC
Confidence 9886 3 2222 1346799999999997544443321110 00000 1233444322111111111 11
Q ss_pred CCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCC
Q 013521 213 SRTDIIFFCSP-NNPTGHAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGF 290 (441)
Q Consensus 213 ~~~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~ 290 (441)
.++.++++ .| +.--|... |++.++++.++|++||+++|.||++..|...+.......+.-.|| | -+++|.+|
T Consensus 223 ~~vAavIv-Epv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD--i--vt~gK~lg- 296 (442)
T TIGR03372 223 DDVAAIIL-EPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPD--I--LCLAKALG- 296 (442)
T ss_pred CcEEEEEE-eCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCC--e--eeehhhhc-
Confidence 34555554 55 55567654 788999999999999999999999976543332212222222344 2 34999998
Q ss_pred cc-ceeEEEEeeccccccCCchhHHHHHH--HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 013521 291 TG-VRLGWTVVPEELRYSNGYPVIKDFNR--IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQS 367 (441)
Q Consensus 291 ~G-~r~G~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 367 (441)
.| +.+|.+++++++. +.+.. .....+++.++++..++.+.|+.-.. +.+.++.++.-+++.+.|++
T Consensus 297 ~G~~Pigavv~~~~i~--------~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~ 365 (442)
T TIGR03372 297 GGVMPIGATIATEAVF--------SVLFDNPFLHTTTFGGNPLACAAALATINELLE---KNLPAQAAIKGDFLLDGFQQ 365 (442)
T ss_pred CCcccceEEEecHHHH--------HhhhccCccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence 78 6899999887763 33321 11223444578888888887762111 22334445555555555554
Q ss_pred C----C-C-eeeCCCCceEEEEEcCCCC-hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 013521 368 L----G-L-KVNGGKNAPYVWVQFPGSS-SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLK 438 (441)
Q Consensus 368 ~----g-~-~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~ 438 (441)
+ + . .-.. ..|.++-+.+.... ...+...+++ +||.+.+... +.+.+||.. ..+++++++++++|.
T Consensus 366 l~~~~~~~i~~vR-G~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~----~~~~lr~~Ppl~~t~~~id~~~~~l~ 439 (442)
T TIGR03372 366 LAAEYPDLIIEAR-GKGLLMAIEFRDNEIGYAFAKELFQ-QNILVAGTLN----NAKSIRIEPPLTITIEQCALVIKAAK 439 (442)
T ss_pred HHHhCCCceEEEe-cceEEEEEEeCChHHHHHHHHHHHH-CCcEEeecCC----CCCEEEEECCcccCHHHHHHHHHHHH
Confidence 3 2 1 1112 35778888885322 2345566555 5999975321 236899884 569999999999999
Q ss_pred hhC
Q 013521 439 NFL 441 (441)
Q Consensus 439 ~~l 441 (441)
+++
T Consensus 440 ~~~ 442 (442)
T TIGR03372 440 DAL 442 (442)
T ss_pred HhC
Confidence 875
No 275
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.71 E-value=9.9e-15 Score=144.92 Aligned_cols=349 Identities=12% Similarity=0.089 Sum_probs=194.6
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHH-hhccCCCCCCCCCC-CcCcHHHHHHHHHH-HhhhCCCCCCcEEE----cCCcH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHA-FALSTVKGYKGYGA-EQGNMALRTAIADK-FYKDMGIEGDEIFI----SDGAQ 145 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~-~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~-l~~~~~~~~~~I~~----t~G~~ 145 (441)
..|+|=-+++ ..++.+.+++...+ .++.......+|.. ..-..++ |.++.. ..+.++...+.+.+ .+|++
T Consensus 35 ~~l~liasen--~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~l-E~~~~~~~~~~f~~~~~~~~~nv~~~SG~~ 111 (475)
T PLN03226 35 KGLELIASEN--FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQI-ETLCQKRALEAFRLDPEKWGVNVQPLSGSP 111 (475)
T ss_pred cCeeEecCCc--cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHH-HHHHHHHHHHHhCCCcceeEEecCcCchHH
Confidence 3577766654 35688999999988 55543222223322 2222333 333332 22356777666655 77777
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhHh-HHHHhccccccccccCccceeEEeecCCCCCccCCCC---C---CCCccEE
Q 013521 146 SDISRLQMLLGSNVTVAVQDPSFPAYID-TSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS---T---TSRTDII 218 (441)
Q Consensus 146 ~al~~l~~l~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~---~~~~~~v 218 (441)
..+.++.++++|||.|+..+....++.. .....|.+... ...+.++..+.++.+++ ..|++ + ..++++|
T Consensus 112 AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~---~~~~~~~~~y~~~~~~g-~iD~d~Le~~l~~~~pklI 187 (475)
T PLN03226 112 ANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISA---TSIYFESMPYRLDESTG-LIDYDKLEKKAMLFRPKLI 187 (475)
T ss_pred HHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhccccccc---ceEEEEeeeeeecCCCC-CcCHHHHHHHHhhcCCeEE
Confidence 7777789999999999985532222211 11111111000 00001333444443322 23322 1 2467766
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS--PRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
++ ..++ +|...+ +++|.++|+++|+++++|++|.--..... +.+ ++ ...++++|++|+++ |.+-|
T Consensus 188 v~-~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p---~~---~~Div~~t~hK~L~--GP~Gg 254 (475)
T PLN03226 188 IA-GASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASP---FE---YCDVVTTTTHKSLR--GPRGG 254 (475)
T ss_pred EE-ecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC---CC---CCeEEEecCccccc--CCCce
Confidence 54 3344 677777 77888999999999999999985333211 211 11 23488999999982 34448
Q ss_pred EEEeeccccccCC------chhHHHHHHHHhhhcCCCcHHHHHHH-HHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 013521 297 WTVVPEELRYSNG------YPVIKDFNRIVCTCFNGASNIVQAGG-LACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG 369 (441)
Q Consensus 297 ~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 369 (441)
+++++++...... ....+.+.......+.+.+.+.+.++ .++++.-.....+..+++..++.+.+.+.|.+.|
T Consensus 255 ~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G 334 (475)
T PLN03226 255 MIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKG 334 (475)
T ss_pred EEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9888775431100 00011111111111222233333333 2233311111236678899999999999999999
Q ss_pred CeeeCC-CCceEEEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcC---CCCCCeEEEEe------ecCHHHHHHHHHHHH
Q 013521 370 LKVNGG-KNAPYVWVQFP-GSSSWDVFAEILEKTHILTIPGSGFG---PGGNEHIRVSA------FGHREYISEACRRLK 438 (441)
Q Consensus 370 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~---~~~~~~iRls~------~~~~~~~~~~l~~l~ 438 (441)
+.+..+ .....+++++. .......+...|++.||.+..+...+ +-.++.||++. +.++++++++.+.|.
T Consensus 335 ~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~ 414 (475)
T PLN03226 335 YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLH 414 (475)
T ss_pred CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHH
Confidence 988653 23567888884 22233445666777899998764221 22356799962 336788999888887
Q ss_pred hhC
Q 013521 439 NFL 441 (441)
Q Consensus 439 ~~l 441 (441)
+++
T Consensus 415 ~~~ 417 (475)
T PLN03226 415 RAV 417 (475)
T ss_pred HHH
Confidence 653
No 276
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.70 E-value=1.3e-14 Score=140.17 Aligned_cols=239 Identities=14% Similarity=0.150 Sum_probs=152.1
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhH----hHHHHhccccccccc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYI----DTSVIVGQAGKFLKE 187 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~ 187 (441)
.+-..+|.+.+|++. + .+..++++++++|+.+ +..++++||+|+++.+.|.+.. ..+...|
T Consensus 63 ~P~~~~lE~~la~le----g--~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~G-------- 128 (384)
T PRK06434 63 NPTVQAFEEKYAVLE----N--AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLG-------- 128 (384)
T ss_pred ChhHHHHHHHHHHHh----C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcC--------
Confidence 345577788888875 3 3466777777799987 7788999999999888766654 3444455
Q ss_pred cCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCc
Q 013521 188 TGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRS 267 (441)
Q Consensus 188 ~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~ 267 (441)
+++++++.++.+.+..+ ..++++|++.+|.|||+.+.+ +++|+++|++++ +++|.++..- +. ..+
T Consensus 129 ----i~v~fvd~~~~~~~~l~---~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~--~~p 193 (384)
T PRK06434 129 ----IHVDYIDTDRLNSLDFD---PSNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YN--QNP 193 (384)
T ss_pred ----cEEEEECCCChhheeec---CCCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-cc--CCc
Confidence 58888888653344322 146899999999999999877 889999999998 4569997521 11 112
Q ss_pred ccccCCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHH
Q 013521 268 IYEIPGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQA 346 (441)
Q Consensus 268 ~~~~~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 346 (441)
+. . +-.+++.|.+|.++.+| .=.|.++++++.+ .+++...........+++.. ++ .+ .+.+.
T Consensus 194 l~-~----gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~-------~~~~~~~~~~~G~~~~~~~A--~l-~~--~gL~t 256 (384)
T PRK06434 194 LD-L----GADVVIHSATKYISGHSDVVMGVAGTNNKSI-------FNNLVERRKTLGSNPDPIQA--YL-AL--RGLKT 256 (384)
T ss_pred hh-c----CCCEEEeecccccCCCCCceEEEEecCcHHH-------HHHHHHHHHhcCCCCCHHHH--HH-HH--hCCCc
Confidence 21 1 22489999999997433 3357777755432 33443333222333343322 11 11 33445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCe-eeCC----------CCceEEEEEcCCCChHHHHHHHHHh
Q 013521 347 LRTVIDYYKENAKIIVDAFQSL-GLK-VNGG----------KNAPYVWVQFPGSSSWDVFAEILEK 400 (441)
Q Consensus 347 ~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~ll~~ 400 (441)
+..+.++.+++...+.+.|+.+ .++ +.-| ..|..+.+++++ .+.+.++++.
T Consensus 257 L~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~---~~~~~~f~~~ 319 (384)
T PRK06434 257 LGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS---MEDVHKFIRN 319 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC---HHHHHHHHHh
Confidence 6777888888999999999987 332 2211 135567788863 3334455544
No 277
>PRK02769 histidine decarboxylase; Provisional
Probab=99.70 E-value=1.4e-14 Score=140.06 Aligned_cols=291 Identities=15% Similarity=0.113 Sum_probs=186.5
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCcE--EEcCCcHHHHHH-HHHh--cCCCCEEEEeCCCchhhHhHHHHhccccccccccC
Q 013521 115 GNMALRTAIADKFYKDMGIEGDEI--FISDGAQSDISR-LQML--LGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETG 189 (441)
Q Consensus 115 g~~~lr~~ia~~l~~~~~~~~~~I--~~t~G~~~al~~-l~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 189 (441)
...++.+.+.+++.+.++.+++++ ++|+|+|++... +... ..+++.|++++-.|+++...++.+|
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg---------- 131 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLR---------- 131 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcC----------
Confidence 345566666666666568877665 899999999654 3222 3578899999999999999999888
Q ss_pred ccceeEEeecCCCCCccCC-CCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcC---cEEEEcccccccc
Q 013521 190 KYRNIVYMNCRPENNFFPD-LST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANG---SIIVYDSAYAAYI 260 (441)
Q Consensus 190 ~~~~v~~v~~~~~~~~~~~-~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~---~~ii~De~~~~~~ 260 (441)
.+...++.++++..+.+ +++ ..++.+|+++.++|+||.+-| +++|+++|++|| +++++|.+++.+.
T Consensus 132 --~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~ 206 (380)
T PRK02769 132 --IKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMI 206 (380)
T ss_pred --CCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEeccccee
Confidence 35566676654333222 111 124888888899999999999 888889999998 6999999998643
Q ss_pred cCC-CCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhc
Q 013521 261 TDP-SPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACL 339 (441)
Q Consensus 261 ~~~-~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 339 (441)
..- ......++. .+.+.+..|.+|.++ ....+|.++.+++.+..-... ...+.........+-+.....+.-+.+
T Consensus 207 ~p~~~~~~~~d~~--~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~-~~yl~~~d~t~~GSR~g~~~l~lw~aL 282 (380)
T PRK02769 207 LPFVNNPPPFSFA--DGIDSIAISGHKFIG-SPMPCGIVLAKKKYVERISVD-VDYIGSRDQTISGSRNGHTALLLWAAI 282 (380)
T ss_pred ecccCccccCCcc--CCCCEEEECCcccCC-CCCCcEEEEEehhhhhhcccC-ccccCCCCCCccCCCCcHHHHHHHHHH
Confidence 321 011111221 134578889999987 556799999987664210000 000000000001112223333333444
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeE
Q 013521 340 SPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHI 419 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~i 419 (441)
+..+...+++..++..+..+++.+.|++.|++....+..+.+.++.+. .++ . + |-.+.+- ...+
T Consensus 283 ~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~---~~~----~-~-~w~l~~~-------~~~~ 346 (380)
T PRK02769 283 RSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS---ERI----W-K-KWHLATS-------GNQA 346 (380)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC---HHH----H-h-CeeEccc-------CCEE
Confidence 333445568888899999999999999889988776777777776652 222 1 2 4444432 2479
Q ss_pred EEEee--cCHHHHHHHHHHHHhh
Q 013521 420 RVSAF--GHREYISEACRRLKNF 440 (441)
Q Consensus 420 Rls~~--~~~~~~~~~l~~l~~~ 440 (441)
|+.+. .+++.+++.++.|...
T Consensus 347 hi~~~~~~~~~~~~~f~~dl~~~ 369 (380)
T PRK02769 347 HIITMPHHNKQQIDSLIDELIFD 369 (380)
T ss_pred EEEECCCCCHHHHHHHHHHHHHH
Confidence 99973 3677888888888653
No 278
>PLN02271 serine hydroxymethyltransferase
Probab=99.70 E-value=1.4e-14 Score=141.83 Aligned_cols=344 Identities=14% Similarity=0.130 Sum_probs=207.3
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCC--CCCC-CcCcHHHHHHHHHHHhhhCCCCC----CcEEEcCCcH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYK--GYGA-EQGNMALRTAIADKFYKDMGIEG----DEIFISDGAQ 145 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~--~Y~~-~~g~~~lr~~ia~~l~~~~~~~~----~~I~~t~G~~ 145 (441)
.-|+|=-.++ ..++.+.+++...+.+... .++. +|.. .....++.....+...+.|+.+. -||-.-+|++
T Consensus 149 ~~l~LIASEN--~~S~av~~algS~ltnkYa-EG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~ 225 (586)
T PLN02271 149 KGIELIASEN--FVCRAVMEALGSHLTNKYS-EGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTS 225 (586)
T ss_pred cCeeeccccc--cCCHHHHHHhcCcccccCC-CCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHH
Confidence 3466655544 2567778787776654322 2221 3322 22223333333333334677766 6788889988
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhHhHHH------HhccccccccccCccceeEEeecCCCCCccCCCC------CCC
Q 013521 146 SDISRLQMLLGSNVTVAVQDPSFPAYIDTSV------IVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS------TTS 213 (441)
Q Consensus 146 ~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~------~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~------~~~ 213 (441)
..+..+.++++|||+|+..+..|.+...... .....|. +.+++.++++++++ ..|++ ...
T Consensus 226 AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~-------~~~~vpY~~d~~~g-~IDyd~lek~a~~~ 297 (586)
T PLN02271 226 ANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASI-------FFESLPYKVNPQTG-YIDYDKLEEKALDF 297 (586)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccc-------eEEEEEcccccccC-ccCHHHHHHHhhhc
Confidence 8888889999999999999988887654321 1111121 13555555654432 22322 247
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC-CC-CCcccccCCCcceeEEEecCCcccCCc
Q 013521 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD-PS-PRSIYEIPGAREVAIEISSFSKFAGFT 291 (441)
Q Consensus 214 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~-~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~ 291 (441)
++|+|++..-.|| ..++ +++|.++|+++|+++++|.+|..-... +. +.++. ...++.+|.+|++ .
T Consensus 298 rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~------~aDvvt~TTHKtL--r 364 (586)
T PLN02271 298 RPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD------YCDIVTSTTHKSL--R 364 (586)
T ss_pred CCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc------CCcEEEeCCcccC--C
Confidence 8999888666787 5566 778888889999999999999853322 21 22221 2348999999998 5
Q ss_pred cceeEEEEeecccccc------------CCchhHHHHHHHHhhhcCCCcHHHHHHHHHh-cCCCcHHHHHHHHHHHHHHH
Q 013521 292 GVRLGWTVVPEELRYS------------NGYPVIKDFNRIVCTCFNGASNIVQAGGLAC-LSPDGFQALRTVIDYYKENA 358 (441)
Q Consensus 292 G~r~G~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-l~~~~~~~~~~~~~~~~~~~ 358 (441)
|.|-|.++++++.... ..+.+.+++.........+.+.....|+++. +.+-.....+.+.++..+|.
T Consensus 365 GPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NA 444 (586)
T PLN02271 365 GPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNA 444 (586)
T ss_pred CCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 7778998887642100 0011222222211112222222223333322 22111233478888889999
Q ss_pred HHHHHHHHhCCCeeeC-CCCceEEEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcC---CCCCCeEEEEe------ecCH
Q 013521 359 KIIVDAFQSLGLKVNG-GKNAPYVWVQFPGS-SSWDVFAEILEKTHILTIPGSGFG---PGGNEHIRVSA------FGHR 427 (441)
Q Consensus 359 ~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~---~~~~~~iRls~------~~~~ 427 (441)
+.|.+.|.+.|+++.. ..+...+|+++... .....+++.|++.||.+.--..++ +..++.|||+. +..+
T Consensus 445 kaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e 524 (586)
T PLN02271 445 QALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLE 524 (586)
T ss_pred HHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCc
Confidence 9999999999998753 34566799999632 246778888999999986432222 22367899994 2246
Q ss_pred HHHHHHHHHHHhh
Q 013521 428 EYISEACRRLKNF 440 (441)
Q Consensus 428 ~~~~~~l~~l~~~ 440 (441)
+++++..+.|.++
T Consensus 525 ~d~~~iA~~i~~~ 537 (586)
T PLN02271 525 SDFETIADFLLRA 537 (586)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777766654
No 279
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.70 E-value=5.1e-15 Score=156.04 Aligned_cols=299 Identities=12% Similarity=0.074 Sum_probs=199.4
Q ss_pred cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcH----HHHHH-HHHhcCC-CC----EEEEeCCCchhhHhHHHHhccccc
Q 013521 114 QGNMALRTAIADKFYKDMGIEGDEIFISDGAQ----SDISR-LQMLLGS-NV----TVAVQDPSFPAYIDTSVIVGQAGK 183 (441)
Q Consensus 114 ~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~----~al~~-l~~l~~~-gd----~Vlv~~p~y~~~~~~~~~~g~~~~ 183 (441)
+|+.++.+.+.+++.+-+|. +.|+++++++ .++.+ +..+.++ || +|+++...|......+...|
T Consensus 564 ~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G---- 637 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCG---- 637 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCC----
Confidence 46666655555555554465 8999999999 66666 6777765 88 89999999999888888877
Q ss_pred cccccCccceeEEeecCCCCCccCC-CCC--C---CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccc
Q 013521 184 FLKETGKYRNIVYMNCRPENNFFPD-LST--T---SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYA 257 (441)
Q Consensus 184 ~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~ 257 (441)
.+++.++.+.++..+++ ++. . +++++|++++|+|-+|...+ +++|+++|+++|+++++|.++.
T Consensus 638 --------~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~ 706 (993)
T PLN02414 638 --------MKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANM 706 (993)
T ss_pred --------CEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCH
Confidence 69999999765543322 211 1 37889999999999998877 8999999999999999999986
Q ss_pred ccccCCCCCcccccCCCcceeEEEecCCcccC----CccceeEEEEeeccccccCCch-hH-H--H-HHHHHhhhcCC--
Q 013521 258 AYITDPSPRSIYEIPGAREVAIEISSFSKFAG----FTGVRLGWTVVPEELRYSNGYP-VI-K--D-FNRIVCTCFNG-- 326 (441)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~----~~G~r~G~l~~~~~~~~~~~~~-~~-~--~-~~~~~~~~~~~-- 326 (441)
--... ...... .+.++++.|.+|+|+ ..|..+|++.+.+++... .+. .+ . . ..+.......+
T Consensus 707 ~a~~~--l~~p~~----~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~-lPg~~v~~~~~~~~r~~~s~iGt~~ 779 (993)
T PLN02414 707 NAQVG--LTSPGF----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF-LPSHPVVPTGGIPRPEKTQPLGTIS 779 (993)
T ss_pred HhccC--cCCccc----cCCCEEEecCCccCCcCcccCCCCeeeEEEchhhccc-CCCCccccCCCcccccCCCCcCCcc
Confidence 31111 111112 234599999999775 244569999988876421 110 00 0 0 11111110111
Q ss_pred ----CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceE--EEEEcC------CCChHHH
Q 013521 327 ----ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPY--VWVQFP------GSSSWDV 393 (441)
Q Consensus 327 ----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~--~~~~~~------~~~~~~~ 393 (441)
.+.....++...+...|.+.+++..+....+..++.+.|.+. ++.+..+.+..+ ..+.++ +.+..++
T Consensus 780 ~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di 859 (993)
T PLN02414 780 AAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDV 859 (993)
T ss_pred chhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHH
Confidence 111333445555555566778888888999999999999774 555544333222 333443 2445788
Q ss_pred HHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 394 FAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 394 ~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
.++|+ ++||....-+ | + ..+++|++. ..+++++++++++|..+
T Consensus 860 ~krL~-d~Gihapt~~-~-p-v~~~lmiepTE~~skeelDrf~~al~~i 904 (993)
T PLN02414 860 AKRLM-DYGFHAPTMS-W-P-VPGTLMIEPTESESKAELDRFCDALISI 904 (993)
T ss_pred HHHHH-HcCcEEeeec-c-c-cCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence 88888 5699865433 4 3 478899995 56899999999998764
No 280
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.70 E-value=4.5e-14 Score=139.89 Aligned_cols=340 Identities=11% Similarity=0.076 Sum_probs=192.8
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~ 145 (441)
.++.++|+..|. ..+ ..+|.+.+++.+.+.+... ....+... +....+|+.+.+..+-. .+.|+++++++
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~--~~~~~~~~----~~~~~lae~L~~~~p~~~~~~v~f~~SGs 113 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIH--YTPAYMYH----EPLVRLAKKLCELAPGDFEKRVTFGLSGS 113 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccC--ccccccCC----HHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 356788886553 222 3679999999998875321 11111122 33344444443322322 25899999999
Q ss_pred HHHHH-HH--HhcCCCCEEEEeCCCchhhHhHHHHh-cccc----ccccccCccceeEEeecCCCCC--c---c------
Q 013521 146 SDISR-LQ--MLLGSNVTVAVQDPSFPAYIDTSVIV-GQAG----KFLKETGKYRNIVYMNCRPENN--F---F------ 206 (441)
Q Consensus 146 ~al~~-l~--~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~----~~~~~~~~~~~v~~v~~~~~~~--~---~------ 206 (441)
+|... +. ........|+...-+|++....+... +... .+.+.. ..+..+|..+... + .
T Consensus 114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~ 190 (445)
T PRK08593 114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLL---PGFVHIPFPDKYRGMYEEPDANFVEE 190 (445)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCC---CCcEEeCCCccccccccCCcHHHHHH
Confidence 99886 42 22333457888899999865433322 2110 000000 1233333221100 0 0
Q ss_pred --CCCC-------CCCCccEEEEcCCCCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcc
Q 013521 207 --PDLS-------TTSRTDIIFFCSPNNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGARE 276 (441)
Q Consensus 207 --~~~~-------~~~~~~~v~i~~p~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~ 276 (441)
..++ ..+++.+|++.-.+...|.+ .|++.+++|.++|++||+++|.||++..|...+.......+.-.+|
T Consensus 191 ~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD 270 (445)
T PRK08593 191 YLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD 270 (445)
T ss_pred HHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC
Confidence 0010 01345565543337777876 7899999999999999999999999986644332211122221344
Q ss_pred eeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 013521 277 VAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKE 356 (441)
Q Consensus 277 ~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 356 (441)
+-+++|.++ .|+++|+++++++++ +.+.......+.+.++++..++.+.++.-.. +++.++.++
T Consensus 271 ----i~t~gK~l~-~G~p~gav~~~~~i~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~l~~~~~~ 334 (445)
T PRK08593 271 ----LMSFGKSLA-GGMPMSAIVGRKEIM--------ESLEAPAHLFTTGANPVSCAAALATIDMIED---ESLLQRSAE 334 (445)
T ss_pred ----Eeeeccccc-CCcccEEEEEcHHHH--------hhhccCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHH
Confidence 347999998 889999999998773 3332111222344677888877777752111 234445555
Q ss_pred HHHHHHHHHHhC----CCeeeCCCCceEEEEEcCCC------C---hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe
Q 013521 357 NAKIIVDAFQSL----GLKVNGGKNAPYVWVQFPGS------S---SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA 423 (441)
Q Consensus 357 ~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~------~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~ 423 (441)
..+++.+.|+++ ++......-|.++.+.+... + ...+...+++ +||.+.+. ..+.+|++.
T Consensus 335 ~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~------~~~~lr~~p 407 (445)
T PRK08593 335 KGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVIIAV------AGNVLRFQP 407 (445)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEecc------CCCEEEEEC
Confidence 555555555543 32111112355555555310 1 1235555554 59998663 135799884
Q ss_pred --ecCHHHHHHHHHHHHhhC
Q 013521 424 --FGHREYISEACRRLKNFL 441 (441)
Q Consensus 424 --~~~~~~~~~~l~~l~~~l 441 (441)
..+++++++++++|.+++
T Consensus 408 ~l~~t~~~id~~~~~l~~~l 427 (445)
T PRK08593 408 PLVITYEQLDTALNTIEQAF 427 (445)
T ss_pred CCccCHHHHHHHHHHHHHHH
Confidence 558999999999998753
No 281
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.69 E-value=1.2e-14 Score=140.46 Aligned_cols=315 Identities=13% Similarity=0.102 Sum_probs=184.8
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCC--CcCcHHHHHHHHHHHhhhCCCCC-CcEEEc-CCcHHHHHH-HHHhcCCC
Q 013521 84 QPIPDIITSAMAEHAFALSTVKGYKGYGA--EQGNMALRTAIADKFYKDMGIEG-DEIFIS-DGAQSDISR-LQMLLGSN 158 (441)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~-~~I~~t-~G~~~al~~-l~~l~~~g 158 (441)
...|+.+++++.+..... -...++.+ ..-..+.|+.+++++ ++++ .+|+++ +++|.+++. +..++.+
T Consensus 12 ~~~~~~v~~a~~~~~~~~---~~~~hr~~~f~~~~~~~r~~l~~l~----~~~~~~~v~f~~gs~T~a~~~~~~~l~~~- 83 (361)
T TIGR01366 12 SKVRLEQLQALTTTAASL---FGTSHRQAPVKNLVGRVREGLAELF----SLPDGYEVILGNGGATAFWDAATFGLIEK- 83 (361)
T ss_pred cCCCHHHHHHHHhcCccc---cccCcCChHHHHHHHHHHHHHHHHh----CCCCCceEEEECCchhHHHHHHHHhcccc-
Confidence 456788888877531100 01123332 234455677777765 7654 478886 559999997 6677643
Q ss_pred CEEEEeCCCchh-hHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHH
Q 013521 159 VTVAVQDPSFPA-YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLK 237 (441)
Q Consensus 159 d~Vlv~~p~y~~-~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~ 237 (441)
+.+++..-.|.. +.+.+...... .++..++.+... .++....+++++|.+++..|.||.+.|. +
T Consensus 84 ~~l~i~~G~~~~~~~~~a~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~lV~~~h~et~tG~~~pi---~ 148 (361)
T TIGR01366 84 KSLHLSFGEFSSKFAKAVKLAPWL----------GEPIIVTADPGS--APEPQADPGVDVIAWAHNETSTGVAVPV---R 148 (361)
T ss_pred cccEEecCHHHHHHHHHHHhhhcc----------CCceEEecCCCC--CCCCccCCCCCEEEEcccCCccceeccc---c
Confidence 333444444532 33333332100 134555554322 2233334789999999999999999994 4
Q ss_pred HHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCC--------
Q 013521 238 KLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNG-------- 309 (441)
Q Consensus 238 ~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~-------- 309 (441)
+| ++++|+++|+|.+.+-. ..+..+.. ..+++.|..|.+|.+| .++.++++++.+....
T Consensus 149 ~I---~~~~g~~~iVDavqs~g---~~~idv~~------~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~~~ 215 (361)
T TIGR01366 149 RP---EGSDDALVVIDATSGAG---GLPVDIAE------TDVYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASGRW 215 (361)
T ss_pred cc---cccCCCeEEEEcCcccc---CCCCCHHH------CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCCCC
Confidence 45 47899999999998732 11333322 2489999999999764 3666677776652211
Q ss_pred -chhHHHHHHHH-----hhhcCCCcHH---HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeeCC-C--
Q 013521 310 -YPVIKDFNRIV-----CTCFNGASNI---VQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG-LKVNGG-K-- 376 (441)
Q Consensus 310 -~~~~~~~~~~~-----~~~~~~~~~~---~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~-- 376 (441)
+...+ +.... ....++++.. +..+++..+.+.+ .++.+.++.++..+++++.|.+.+ ++.... .
T Consensus 216 ~p~~~d-~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~g--g~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~ 292 (361)
T TIGR01366 216 VPEFLS-LPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNG--GLDWAVARTADSSSRLYSWAQERPYATPFVTDPGK 292 (361)
T ss_pred Cchhhh-HHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhh
Confidence 00111 11111 1223333444 2233444443331 146677888899999999999885 454421 1
Q ss_pred -CceEEEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 377 -NAPYVWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 377 -~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
......+.++ +.+..++...| +++||.+.++. +..+...+|+|+ +++.++++++++.|+++
T Consensus 293 ~s~~v~~v~~~~g~~~~~v~~~L-~~~gI~i~~~~--~~l~~~~vRis~~~~~t~~di~~l~~al~~~ 357 (361)
T TIGR01366 293 RSQVVGTIDFVDDIDAATVAKIL-RANGIVDTEPY--RKLGRNQLRVAMFPAIDPDDVEALTECVDWV 357 (361)
T ss_pred cccceEEEECCCccCHHHHHHHH-HHCCCeeccCc--cccCCCcEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 1111233333 44556666666 55699998764 223456899996 45899999999999875
No 282
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.69 E-value=1.1e-14 Score=144.40 Aligned_cols=342 Identities=13% Similarity=0.093 Sum_probs=197.0
Q ss_pred CCCCeEEeCCC--CCCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIG--DTTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g--~~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..| ...+ ..+|.+.+++.+.+.+.. ....|... +.+..+|+.|....+-..+.+++++++++
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~---~~~~~~~~----~~~~~lae~L~~~~p~~~~~v~f~~SGsE 152 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQP---LHSQELLD----PLRAMLAKTLAALTPGKLKYSFFCNSGTE 152 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCc---ccccccCC----HHHHHHHHHHHHhCCCCCCEEEEeCCchH
Confidence 35678888766 3333 367899999999887642 12222223 34444555543322333468999999999
Q ss_pred HHHH-H--HHhcC--C-CCEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCCCccCCCCC----CCCc
Q 013521 147 DISR-L--QMLLG--S-NVTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPENNFFPDLST----TSRT 215 (441)
Q Consensus 147 al~~-l--~~l~~--~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~~~~~~~~~----~~~~ 215 (441)
|... + ..... . ...|+....+|++.............+.. .......+..+|..+...+...++. ..++
T Consensus 153 Ave~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i 232 (459)
T PRK11522 153 SVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDV 232 (459)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcE
Confidence 9886 3 22222 2 34688888999997544433321111000 0000011223332211011000111 1234
Q ss_pred cEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcc-
Q 013521 216 DIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTG- 292 (441)
Q Consensus 216 ~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G- 292 (441)
.+++ ..| +.-.|.+ .|.+.++++.++|++||+++|.||++..|...+.......+.-.|| | -+++|.+| .|
T Consensus 233 AavI-vEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD--i--vt~gK~lg-gG~ 306 (459)
T PRK11522 233 AAVI-LEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPD--I--LCLAKALG-GGV 306 (459)
T ss_pred EEEE-EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCC--E--EEechhhh-CCC
Confidence 4544 455 5556765 5788999999999999999999999976543332111212222344 3 37899998 78
Q ss_pred ceeEEEEeeccccccCCchhHHHHH--HHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 013521 293 VRLGWTVVPEELRYSNGYPVIKDFN--RIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-- 368 (441)
Q Consensus 293 ~r~G~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 368 (441)
+.+|.+++.+++. +.+. ......+.+.++++..++.+.|+.-.. +.+.++.++.-+++.+.|+++
T Consensus 307 ~Pigav~~~~~i~--------~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~ 375 (459)
T PRK11522 307 MPIGATIATEEVF--------SVLFDNPFLHTTTFGGNPLACAAALATINVLLE---QNLPAQAEQKGDYLLDGFRQLAR 375 (459)
T ss_pred ccceeEEEcHHHH--------HHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999987763 3332 111223344578888878777762111 234566666667777777654
Q ss_pred CCe----eeCCCCceEEEEEcCCCC-hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 369 GLK----VNGGKNAPYVWVQFPGSS-SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 369 g~~----~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
... -.. ..|.++-+.+.... ...+...+++ +||.+.+.. .+.+.+|+.. ..+++++++++++|.+++
T Consensus 376 ~~~~~i~~Vr-G~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~----~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l 449 (459)
T PRK11522 376 EYPDLVQEAR-GKGMLMAIEFVDNEIGYNFASEMFR-QRVLVAGTL----NNAKTIRIEPPLTLTIEQCEQVLKAARKAL 449 (459)
T ss_pred hCCCceeeEE-eceeEEEEEecCchHHHHHHHHHHH-CCeEEEecC----CCCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 121 111 24777778775322 2345555555 599997632 1346899884 568999999999998753
No 283
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.69 E-value=5.5e-15 Score=142.40 Aligned_cols=214 Identities=20% Similarity=0.227 Sum_probs=138.5
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhcc-ccccccccCccc
Q 013521 115 GNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQ-AGKFLKETGKYR 192 (441)
Q Consensus 115 g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~ 192 (441)
-...|.+.||+.- + .+.+++++.+++|+.. +..++++||.|++....|.+....+...-. .| +
T Consensus 56 t~~~le~~la~Le----~--g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~g---------v 120 (386)
T PF01053_consen 56 TVRALEQRLAALE----G--GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFG---------V 120 (386)
T ss_dssp HHHHHHHHHHHHH----T---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTT---------S
T ss_pred cHHHHHHHHHHhh----c--ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccC---------c
Confidence 4456677776653 2 3788999999999976 788999999999999999998777764321 11 4
Q ss_pred eeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcC-cEEEEcccccccccCCCCCccccc
Q 013521 193 NIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANG-SIIVYDSAYAAYITDPSPRSIYEI 271 (441)
Q Consensus 193 ~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~-~~ii~De~~~~~~~~~~~~~~~~~ 271 (441)
++.+++....+.+...+ .+++++||+-+|.||+..+.+ +++|+++|+++| +++|+|+.+.....- .++ .+
T Consensus 121 ~v~~~d~~d~~~l~~~l--~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~---~pL-~~ 191 (386)
T PF01053_consen 121 EVTFVDPTDLEALEAAL--RPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ---NPL-EL 191 (386)
T ss_dssp EEEEESTTSHHHHHHHH--CTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC----GG-GG
T ss_pred EEEEeCchhHHHHHhhc--cccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeee---ccC-cC
Confidence 77777553211111111 358999999999999988877 999999999998 999999999742211 112 12
Q ss_pred CCCcceeEEEecCCcccCCcc-ceeEEEEeec-cccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHH
Q 013521 272 PGAREVAIEISSFSKFAGFTG-VRLGWTVVPE-ELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRT 349 (441)
Q Consensus 272 ~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 349 (441)
+-+|++.|.+|.++-.| .=.|.+++++ ..+ .+.+...........++....... .+.+.+.-
T Consensus 192 ----GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~-------~~~l~~~~~~~G~~~~p~da~ll~-----rgl~Tl~~ 255 (386)
T PF01053_consen 192 ----GADIVVHSATKYLSGHSDVMGGAVVVNGSSEL-------YDRLREFRRLLGATLSPFDAWLLL-----RGLRTLPL 255 (386)
T ss_dssp ----T-SEEEEETTTTTTTSSSE-EEEEEESSHHHH-------HHHHHHHHHHHT-B--HHHHHHHH-----HHHTTHHH
T ss_pred ----CceEEEeeccccccCCcceeeEEEEECchhhh-------hhhhcchhhhcCccchHHHHHHHh-----cCCCcHHH
Confidence 23499999999886222 2267888765 222 344544444444444444322222 34445577
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 013521 350 VIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 350 ~~~~~~~~~~~l~~~L~~~ 368 (441)
+.++..++...+.+.|+++
T Consensus 256 R~~~~~~nA~~lA~~L~~h 274 (386)
T PF01053_consen 256 RMERQNENAEALAEFLEEH 274 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 7788888999999999988
No 284
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.68 E-value=2e-14 Score=136.81 Aligned_cols=217 Identities=20% Similarity=0.237 Sum_probs=148.5
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCcc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKY 191 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 191 (441)
.+-...|.++++.+- ..++.+.++.+++||.. ++.++++||.|++....|.+-+..+.....+..
T Consensus 62 nPT~~~lE~~~a~LE------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~g-------- 127 (396)
T COG0626 62 NPTRDALEEALAELE------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFG-------- 127 (396)
T ss_pred CccHHHHHHHHHHhh------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcC--------
Confidence 345567777777762 46788999999999998 789999999999999999887777665543221
Q ss_pred ceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc
Q 013521 192 RNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI 271 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~ 271 (441)
+++.+++..........+. .+++|+|++-+|.|||-.+.+ +.+|+++|+++|+++|+|..|....+.. | + .+
T Consensus 128 i~~~~~d~~~~~~~~~~~~-~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~-P--L-~~ 199 (396)
T COG0626 128 VEVTFVDPGDDEALEAAIK-EPNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQR-P--L-EL 199 (396)
T ss_pred eEEEEECCCChHHHHHHhc-ccCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccC-h--h-hc
Confidence 4666665432211111111 158999999999999987777 9999999999999999999998533221 1 1 11
Q ss_pred CCCcceeEEEecCCcccCCccce--eEEEEeeccccccCCchhHHHHHHHHh-hhcCCCcHHHHHHHHHhcCCCcHHHHH
Q 013521 272 PGAREVAIEISSFSKFAGFTGVR--LGWTVVPEELRYSNGYPVIKDFNRIVC-TCFNGASNIVQAGGLACLSPDGFQALR 348 (441)
Q Consensus 272 ~~~~~~~i~i~S~SK~~~~~G~r--~G~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~ 348 (441)
+-.|++.|.+|.++ ..-. .|.++++++.+ .+.+..... ......++... ++...+.+-+.
T Consensus 200 ----GaDIVvhSaTKyl~-GHsDvl~G~v~~~~~~~-------~~~~~~~~~~~~G~~l~p~dA-----~l~lRGlkTL~ 262 (396)
T COG0626 200 ----GADIVVHSATKYLG-GHSDVLGGVVLTPNEEL-------YELLFFAQRANTGAVLSPFDA-----WLLLRGLRTLA 262 (396)
T ss_pred ----CCCEEEEecccccc-CCcceeeeEEecChHHH-------HHHHHHHHHhhcCCCCCHHHH-----HHHHhccchHH
Confidence 23499999999987 4333 47666666664 333322222 23333444442 22224556667
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 013521 349 TVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 349 ~~~~~~~~~~~~l~~~L~~~ 368 (441)
-+.++.+++...+.+.|+++
T Consensus 263 ~Rm~~~~~nA~~IA~~L~~~ 282 (396)
T COG0626 263 LRMERHNENALKIAEFLADH 282 (396)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 77888889999999999987
No 285
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.68 E-value=9.7e-14 Score=131.30 Aligned_cols=303 Identities=19% Similarity=0.210 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHh-cCCCCEEEEeC
Q 013521 88 DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQML-LGSNVTVAVQD 165 (441)
Q Consensus 88 ~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l-~~~gd~Vlv~~ 165 (441)
+...+++.+.++ ++....++ -..++.+++|+|+ | ....+.++++|.|+.+ +.++ ++|||+|++++
T Consensus 15 ~~e~~~v~~vl~-----sg~i~~G~--~v~~FE~~~ae~~----G--~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps 81 (374)
T COG0399 15 EEELAAVQEVLK-----SGWLTGGP--FVRRFEQAFAEYL----G--VKYAVAVSSGTAALHLALLALAIGPGDEVIVPS 81 (374)
T ss_pred hHHHHHHHHHHH-----cCCeecCh--HHHHHHHHHHHHh----C--CCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence 566777777776 33333333 5688999999996 4 4678888888889887 5544 69999999999
Q ss_pred CCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC---C--CCCccEEEEcCCCCccccCCCHHHHHHHH
Q 013521 166 PSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS---T--TSRTDIIFFCSPNNPTGHAATWQQLKKLV 240 (441)
Q Consensus 166 p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~ 240 (441)
-+|......+...| ++++++++|++ .+..|.+ + ++++|+|+..+- -|...+ +++|.
T Consensus 82 ~TfvATan~i~~~G------------a~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVhl---~G~~~d---m~~i~ 142 (374)
T COG0399 82 FTFVATANAVLLVG------------AKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVHL---AGQPCD---MDAIM 142 (374)
T ss_pred CchHHHHHHHHHcC------------CeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEehh---ccCCCC---HHHHH
Confidence 99999999999999 69999999976 3344432 2 577999887654 344445 88999
Q ss_pred HHHHHcCcEEEEcccccccc-cCCCCCcccccCCCcceeEEEecC--CcccCCccceeEEEEeeccccccCCchhHHHHH
Q 013521 241 EFAKANGSIIVYDSAYAAYI-TDPSPRSIYEIPGAREVAIEISSF--SKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFN 317 (441)
Q Consensus 241 ~~a~~~~~~ii~De~~~~~~-~~~~~~~~~~~~~~~~~~i~i~S~--SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~ 317 (441)
++|++||++||+|.+++... +.+ ..+.++. .+.+.|| +|.++ +| --|.++++++.+ .+..+
T Consensus 143 ~la~~~~l~vIEDaAqa~Ga~y~g--k~vGt~G-----d~~~fSF~~~K~it-tg-EGGav~tnd~el-------a~k~~ 206 (374)
T COG0399 143 ALAKRHGLPVIEDAAQAHGATYKG--KKVGSFG-----DIGAFSFHATKNLT-TG-EGGAVVTNDEEL-------AEKAR 206 (374)
T ss_pred HHHHHcCCeEEEEcchhccCeecC--ccccccc-----ceEEEEecCCCCcc-cc-CceEEEeCCHHH-------HHHHH
Confidence 99999999999999988432 222 2333332 2566677 79987 66 669999988775 34444
Q ss_pred HHHhhhcC------------CCc-HHH-HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCc----
Q 013521 318 RIVCTCFN------------GAS-NIV-QAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNA---- 378 (441)
Q Consensus 318 ~~~~~~~~------------~~~-~~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---- 378 (441)
.++..... +.+ .+. ..|++.. ...+.++++.++-++..+...+.|+++ ++.+.....+
T Consensus 207 ~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl---~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~ 283 (374)
T COG0399 207 SLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGL---AQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHA 283 (374)
T ss_pred HHHHhCcCCCccccceeeecccccCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceee
Confidence 33332211 111 111 1112222 223445666666666677777778766 3444332222
Q ss_pred eE-EEEEcCCC-ChHHHHHHHHHhcCe----EEeCCCCc--------CC--C-------CCCeEEEEeec--CHHHHHHH
Q 013521 379 PY-VWVQFPGS-SSWDVFAEILEKTHI----LTIPGSGF--------GP--G-------GNEHIRVSAFG--HREYISEA 433 (441)
Q Consensus 379 ~~-~~~~~~~~-~~~~~~~~ll~~~gi----~v~pg~~f--------~~--~-------~~~~iRls~~~--~~~~~~~~ 433 (441)
.+ ..+.++.. .+.+.+...|++.|| ...|-... .+ . ....++|-+.. +.+++++.
T Consensus 284 ~~~~~i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V 363 (374)
T COG0399 284 WHLYTILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRV 363 (374)
T ss_pred eeeeEEEecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHH
Confidence 11 22334421 344555555666654 44453221 00 0 13457776533 78999999
Q ss_pred HHHHHhhC
Q 013521 434 CRRLKNFL 441 (441)
Q Consensus 434 l~~l~~~l 441 (441)
++.|++++
T Consensus 364 ~~~l~~~~ 371 (374)
T COG0399 364 IEALKEVL 371 (374)
T ss_pred HHHHHHHh
Confidence 99998764
No 286
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.68 E-value=6.3e-14 Score=134.99 Aligned_cols=341 Identities=13% Similarity=0.090 Sum_probs=213.9
Q ss_pred CCCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCc
Q 013521 69 HPDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI-EGDEIFISDGA 144 (441)
Q Consensus 69 ~~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~ 144 (441)
..++.+|||..|. ... ..+|.+.+++++.+..+.. ....|... +-..++|+.|...... ....+++++++
T Consensus 53 vdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h--~~~~~~~~----e~~v~~ae~L~~~~p~~~~~~~~f~~sG 126 (447)
T COG0160 53 VDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNH--THTRDLYY----EPYVELAEKLTALAPGSGLKKVFFGNSG 126 (447)
T ss_pred CCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhc--ccCCcccc----hhHHHHHHHHHHhCCcccCCeEEecCCc
Confidence 3467789998854 333 4789999999999887641 22223222 3444555555443344 45689999999
Q ss_pred HHHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHH-hcccccc----ccccCccceeEEeecCCCCC--ccC---C---
Q 013521 145 QSDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVI-VGQAGKF----LKETGKYRNIVYMNCRPENN--FFP---D--- 208 (441)
Q Consensus 145 ~~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~----~~~~~~~~~v~~v~~~~~~~--~~~---~--- 208 (441)
++|.+. + ......+..|+...-+|++....... .|..... .+.. -.+..+|....-. +.. +
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~---~~v~~~Pyp~~yr~p~~~~~~~~~~ 203 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLP---PGVYHVPYPNPYRCPFGIGGEECGD 203 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCC---CCeEEecCCccccCcccCchhhhhH
Confidence 999886 3 33334456788889999886444333 3332111 1111 1355555543111 110 0
Q ss_pred -----CC----C----CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC
Q 013521 209 -----LS----T----TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG 273 (441)
Q Consensus 209 -----~~----~----~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~ 273 (441)
++ . ..++.++++ .| +.-.|.+ .|++.++++.++|++||+++|.||+...+...+.-....+..-
T Consensus 204 ~~~~~~e~~i~~~~~~~~~vAaiI~-EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv 282 (447)
T COG0160 204 DALEYIERALFDLEVGPEEVAAIII-EPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV 282 (447)
T ss_pred HHHHHHHHHHHhhcCCCCceeEEEE-ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC
Confidence 00 0 135666554 55 7777755 6888999999999999999999999998877664333433332
Q ss_pred CcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHH
Q 013521 274 AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY 353 (441)
Q Consensus 274 ~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 353 (441)
.|| |-++||.+| .|+.+|.++..+++. + +..-....++..++++.+++.+.|+.-. -+.+.++
T Consensus 283 ~PD----ivt~aK~ig-~G~Pl~avv~r~ei~--------~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie---~e~L~~~ 345 (447)
T COG0160 283 EPD----IVTLAKSLG-GGLPLSAVVGRAEIM--------D-WPPGGHGGTFGGNPVACAAALAVLDVIE---EENLLER 345 (447)
T ss_pred CCC----EEEeccccc-CCCceeEEeccHHhc--------c-cCCcccCCCCCcCHHHHHHHHHHHHHHH---HccHHHH
Confidence 345 446999999 799999999998874 2 2222223335678999988888887211 1356666
Q ss_pred HHHHHHHHHHHHHhC--CCeeeCC--CCceEEEEEcCCC-----C----hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEE
Q 013521 354 YKENAKIIVDAFQSL--GLKVNGG--KNAPYVWVQFPGS-----S----SWDVFAEILEKTHILTIPGSGFGPGGNEHIR 420 (441)
Q Consensus 354 ~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~~-----~----~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iR 420 (441)
.++.-+++.+.|.++ ....... --|.++-+++... . ...+..++++ +|+.+..+.. ..+.||
T Consensus 346 a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~-~Glil~~~G~----~~nviR 420 (447)
T COG0160 346 AAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFE-RGLLLLTCGP----HGNVLR 420 (447)
T ss_pred HHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHH-cCCEEeccCC----CCcEEE
Confidence 666777777777655 2222221 2367777776411 1 2234555554 5998877532 256899
Q ss_pred EE--eecCHHHHHHHHHHHHhhC
Q 013521 421 VS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 421 ls--~~~~~~~~~~~l~~l~~~l 441 (441)
|. +.-++++++++++.|.++|
T Consensus 421 i~PPL~is~e~~d~~l~il~~al 443 (447)
T COG0160 421 ILPPLTISDEELDEGLDILEEAL 443 (447)
T ss_pred EeCCcccCHHHHHHHHHHHHHHH
Confidence 98 4558999999999998764
No 287
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=3.2e-14 Score=131.24 Aligned_cols=338 Identities=19% Similarity=0.190 Sum_probs=219.1
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCC--CCCCCcCcHHHHHHHHHHH-hhhCCCCCCcEEEcCCcHHHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYK--GYGAEQGNMALRTAIADKF-YKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l-~~~~~~~~~~I~~t~G~~~al~ 149 (441)
+.|+|=-.++ -.++.+.+++-..+.+... .++. +|....-+.+..|.+|.-. ++.|+.+--|+-..||++..+.
T Consensus 27 ~~ieLIASEN--~~S~aV~~A~gS~ltnKYA-EGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~a 103 (413)
T COG0112 27 EHIELIASEN--FTSPAVMEAQGSDLTNKYA-EGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQA 103 (413)
T ss_pred hceeeeeccc--cCCHHHHHHHhhhhhhccc-cCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHH
Confidence 3466654443 2568888888887764432 2322 3333333444555555444 3478999899999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC------CCCccEEEEcCC
Q 013521 150 RLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST------TSRTDIIFFCSP 223 (441)
Q Consensus 150 ~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~------~~~~~~v~i~~p 223 (441)
.++++++|||+|+-.+..+.++..-....+..| ++.+++..+++.++. ..|.+. ..+||+|+.-..
T Consensus 104 v~~All~pGDtimgm~l~~GGHltHg~~v~~sG-------~~~~~v~Y~vd~et~-~IDyD~~~k~a~e~kPK~ii~G~S 175 (413)
T COG0112 104 VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSG-------KLFNVVSYGVDPETG-LIDYDEVEKLAKEVKPKLIIAGGS 175 (413)
T ss_pred HHHHHcCCCCeEecccCCCCCcccCCCCCCccc-------eeEEeEecccccccC-ccCHHHHHHHHHHhCCCEEEECcc
Confidence 999999999999999988888754332222222 225888888887633 344332 478999876333
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccc-cccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEee
Q 013521 224 NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA-YITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVP 301 (441)
Q Consensus 224 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~-~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~ 301 (441)
..|- .++ ++++.++|.+.|.++++|-+|-- +...+. |.|+.. ..++.+|.+|+| +|.|-|.+.++
T Consensus 176 aY~r--~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~------AdvVTtTTHKTl--rGPrGG~Il~~ 242 (413)
T COG0112 176 AYSR--PID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH------ADVVTTTTHKTL--RGPRGGIILTN 242 (413)
T ss_pred cccc--ccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc------cceEeCCcccCC--CCCCceEEEec
Confidence 3332 234 78888888899999999999864 444443 333322 238899999998 79999999988
Q ss_pred ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeC-CCCce
Q 013521 302 EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVDAFQSLGLKVNG-GKNAP 379 (441)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~ 379 (441)
++.+ .+.+.+.......+.+.+...|+.+.--.+.. ..++...++.-+|.+.|.+.|.+.|+++.. ..+..
T Consensus 243 ~eel-------~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnH 315 (413)
T COG0112 243 DEEL-------AKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNH 315 (413)
T ss_pred cHHH-------HHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccce
Confidence 7443 45555433333333333333333332211111 234777888889999999999999998864 23445
Q ss_pred EEEEEcCC-CChHHHHHHHHHhcCeEEeC-CCCcC---CCCCCeEEEEee------cCHHHHHHHHHHHHhhC
Q 013521 380 YVWVQFPG-SSSWDVFAEILEKTHILTIP-GSGFG---PGGNEHIRVSAF------GHREYISEACRRLKNFL 441 (441)
Q Consensus 380 ~~~~~~~~-~~~~~~~~~ll~~~gi~v~p-g~~f~---~~~~~~iRls~~------~~~~~~~~~l~~l~~~l 441 (441)
.+.+++.. .-....+..+|++.||.+.- +-.|. +..+..|||+.. -.++++++..+.|.++|
T Consensus 316 l~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl 388 (413)
T COG0112 316 LVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVL 388 (413)
T ss_pred EEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHH
Confidence 68888862 23456778888899999873 22233 334678999951 14678888877776653
No 288
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.66 E-value=5.9e-14 Score=137.57 Aligned_cols=323 Identities=10% Similarity=0.013 Sum_probs=200.8
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC-C-CcEEE--cCCcHHHHHH-HHHhc----
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE-G-DEIFI--SDGAQSDISR-LQMLL---- 155 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~-~~I~~--t~G~~~al~~-l~~l~---- 155 (441)
++.+.+.+.+...+.... .++.......++.+.+.+|+.+.++.+ + ++++. |+|+|++.++ +....
T Consensus 52 ~~~p~~~~~~~~~l~~~~-----~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~ 126 (431)
T TIGR01788 52 WMEPEARKLMDETINKNM-----IDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWR 126 (431)
T ss_pred CCCHHHHHHHHHHHhcCC-----CCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHH
Confidence 445668888888875321 111112234477777777777767877 3 46655 8999999876 43221
Q ss_pred ----CCC-----CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC---C--CCCccEEEEc
Q 013521 156 ----GSN-----VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS---T--TSRTDIIFFC 221 (441)
Q Consensus 156 ----~~g-----d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~--~~~~~~v~i~ 221 (441)
..| ..|++..-.|+++...++.+| +++..+|++++ +...|++ + .+++.+|.++
T Consensus 127 ~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg------------~~v~~i~~d~~-~~~vd~~~L~~~i~~~t~lV~~t 193 (431)
T TIGR01788 127 KRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFD------------VELREVPMDPG-RYVIDPEQVVEAVDENTIGVVCI 193 (431)
T ss_pred HHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcC------------ceeEEEecCCC-ceeeCHHHHHHHHhhCCeEEEEE
Confidence 112 368889999999999998888 58889999864 2222322 1 3567888888
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHc------CcEEEEcccccccc----cCCCCCcccccCCCcceeEEEecCCcccCCc
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKAN------GSIIVYDSAYAAYI----TDPSPRSIYEIPGAREVAIEISSFSKFAGFT 291 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~~~~~~----~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~ 291 (441)
..+|.||.+.| +++|+++|+++ |+++.+|.+|+.+. ....+..+ . ......+.-|.+|+.. .
T Consensus 194 ~g~t~tG~idp---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~---~-~~~~DSis~s~HK~~~-~ 265 (431)
T TIGR01788 194 LGTTYTGEYED---VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDF---R-LPRVKSINVSGHKYGL-V 265 (431)
T ss_pred eCCCCCcccCC---HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhc---C-CCCceEEEECchhccC-C
Confidence 89999999999 88888999999 99999999999533 22212211 1 1233467788999862 4
Q ss_pred cceeEEEEeeccccccCCchhHHHHHH---HHhh----hcCCCcHHH-H-HHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Q 013521 292 GVRLGWTVVPEELRYSNGYPVIKDFNR---IVCT----CFNGASNIV-Q-AGGLACLSPDGFQALRTVIDYYKENAKIIV 362 (441)
Q Consensus 292 G~r~G~l~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~-~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 362 (441)
...+|.+++.++... ...+.. +... .....+... . .+.-..+...+...+++..++..+..+++.
T Consensus 266 P~g~G~l~~r~~~~l------~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~ 339 (431)
T TIGR01788 266 YPGVGWVIWRDEEAL------PEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLA 339 (431)
T ss_pred CCCcEEEEEeChHHc------chhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 445898888765210 011100 0000 001111111 1 111112222233556788888889999999
Q ss_pred HHHHhC-CCeeeCC-CCceEEEEEcCC-----CChHHHHHHHHHhcCeEEeCCCCc-CCCCCCeEEEEee--cCHHHHHH
Q 013521 363 DAFQSL-GLKVNGG-KNAPYVWVQFPG-----SSSWDVFAEILEKTHILTIPGSGF-GPGGNEHIRVSAF--GHREYISE 432 (441)
Q Consensus 363 ~~L~~~-g~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~pg~~f-~~~~~~~iRls~~--~~~~~~~~ 432 (441)
+.|++. ++++..+ +....+.+++++ .+..++.+.|. +.|+.+..-..- ...+..++|+++. .+++.+++
T Consensus 340 ~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~ 418 (431)
T TIGR01788 340 EEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLR-ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAEL 418 (431)
T ss_pred HHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHH-HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHH
Confidence 999988 5888765 456677788763 23445656555 559875321110 1123457899973 36788888
Q ss_pred HHHHHHhh
Q 013521 433 ACRRLKNF 440 (441)
Q Consensus 433 ~l~~l~~~ 440 (441)
+++.|+++
T Consensus 419 ~~~~~~~~ 426 (431)
T TIGR01788 419 LIEDIEAA 426 (431)
T ss_pred HHHHHHHH
Confidence 88888765
No 289
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=4.3e-14 Score=138.90 Aligned_cols=217 Identities=16% Similarity=0.183 Sum_probs=136.4
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH----HHHhccccccccccC
Q 013521 115 GNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT----SVIVGQAGKFLKETG 189 (441)
Q Consensus 115 g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~~~ 189 (441)
-...+++.+|++. +. .+.|++++|+ +|+.+ +..++++||+|+++...|.+.... +...|
T Consensus 70 t~~~le~~la~l~----g~-~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~G---------- 133 (437)
T PRK05613 70 TVEALENRIASLE----GG-VHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLG---------- 133 (437)
T ss_pred HHHHHHHHHHHHh----CC-CeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcC----------
Confidence 4567788888875 54 3567777777 66655 777889999999999999887433 24445
Q ss_pred ccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCc
Q 013521 190 KYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRS 267 (441)
Q Consensus 190 ~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~ 267 (441)
+++++++ ++. + ..+++. .+++++|++.+|.||+|.+.+ +++|+++|+++|+++|+|.+++.... ..+
T Consensus 134 --i~v~~vd-~~~-d-~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~---~~p 202 (437)
T PRK05613 134 --IEVTFVE-NPD-D-PESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL---VRP 202 (437)
T ss_pred --eEEEEEC-CCC-C-HHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc---cCh
Confidence 4788876 221 1 111221 367899988899999999999 88999999999999999999863211 111
Q ss_pred ccccCCCcceeEEEecCCcccCCccceeEEEEe-ecccccc-----------------CCc--------h---hHHHHHH
Q 013521 268 IYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV-PEELRYS-----------------NGY--------P---VIKDFNR 318 (441)
Q Consensus 268 ~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~-~~~~~~~-----------------~~~--------~---~~~~~~~ 318 (441)
+ .+ +..+++.|++|.++..|--+|-+++ +.+.... ... . ..+....
T Consensus 203 ~-~~----GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (437)
T PRK05613 203 L-EL----GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAG 277 (437)
T ss_pred H-Hh----CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHH
Confidence 1 12 2349999999999755555554444 3221000 000 0 0001111
Q ss_pred HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 319 IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 319 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
.........+++... ++. .+.+.+.-+.++..++...+.+.|+++
T Consensus 278 ~~~~~G~~~~p~~a~----l~~-rgl~TL~lR~~~~~~nA~~lA~~L~~h 322 (437)
T PRK05613 278 LLRDTGATLSPFNAW----VTA-QGLDTLSLRLERHNENAIKVAEFLNNH 322 (437)
T ss_pred HHHhcCCCCCHHHHH----HHH-cccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 222223334444422 221 445556777788889999999999987
No 290
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.66 E-value=3.1e-14 Score=134.55 Aligned_cols=336 Identities=11% Similarity=0.167 Sum_probs=199.0
Q ss_pred CCCCCeEEeCCCCCCC---CCcHHHHHHHHHHHhhccCCCCCCCCCC-CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCc
Q 013521 69 HPDARLIRLGIGDTTQ---PIPDIITSAMAEHAFALSTVKGYKGYGA-EQGNMALRTAIADKFYKDMGIEGDEIFISDGA 144 (441)
Q Consensus 69 ~~~~~~i~l~~g~~~~---~~~~~~~~al~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~ 144 (441)
..++..||+..+..+. ..+|.+.+|+++.+.+ + ..|+. .....++-+.|.+. ++ ..|.|-++|.+
T Consensus 50 vDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~-----G-~~fg~Pte~Ei~~Aell~~~----~p-~~e~vrfvnSG 118 (432)
T COG0001 50 VDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER-----G-LSFGAPTELEVELAELLIER----VP-SIEKVRFVNSG 118 (432)
T ss_pred CCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh-----c-CCCCCCCHHHHHHHHHHHHh----cC-cccEEEEecch
Confidence 4567889988776432 3678899999999874 2 24543 33444444444443 33 34899999999
Q ss_pred HHHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHhccccc----------cccccCccceeEEeecCCCCCccCCCCC
Q 013521 145 QSDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGK----------FLKETGKYRNIVYMNCRPENNFFPDLST 211 (441)
Q Consensus 145 ~~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~----------~~~~~~~~~~v~~v~~~~~~~~~~~~~~ 211 (441)
|+|... + .+-+...|+|+..+-+|++....+..-...|. +..... ..+..+|.++.+.+...++.
T Consensus 119 TEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a--~~ti~~~yND~~al~~~~~~ 196 (432)
T COG0001 119 TEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVA--KHTLVLPYNDLEALEEAFEE 196 (432)
T ss_pred hHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhh--ccEEEecCCCHHHHHHHHHH
Confidence 999664 3 33445668999999999997666544211111 000000 12233333221111111112
Q ss_pred C-CCccEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccC-CCCCcccccCCCcceeEEEecCCc
Q 013521 212 T-SRTDIIFFCSP--NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITD-PSPRSIYEIPGAREVAIEISSFSK 286 (441)
Q Consensus 212 ~-~~~~~v~i~~p--~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~-~~~~~~~~~~~~~~~~i~i~S~SK 286 (441)
. ++..+|++ .| .| -|.+ -.++.+++|.++|++||+++|.||+...|... +.......+ .|| +.+|.|
T Consensus 197 ~g~~IAaVIv-EPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi--~PD----lttlGK 268 (432)
T COG0001 197 YGDDIAAVIV-EPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGV--EPD----LTTLGK 268 (432)
T ss_pred cCCcEEEEEe-ccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCc--Ccc----hhhhhh
Confidence 2 45666554 55 66 5654 46678999999999999999999999877654 223334333 244 667999
Q ss_pred ccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH----
Q 013521 287 FAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIV---- 362 (441)
Q Consensus 287 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~---- 362 (441)
.+| .|+.+|.+.++.+++.. ......+....+.+.++++..|..+.++.-... +...+++.+..+.|.
T Consensus 269 iIG-GGlP~ga~gGr~eiM~~-----~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~--~~~y~~l~~~~~~L~~gl~ 340 (432)
T COG0001 269 IIG-GGLPIGAFGGRAEIMEQ-----LAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE--EGVYERLDALGERLAEGLR 340 (432)
T ss_pred hhc-CCcceeeeccHHHHHhh-----hCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHH
Confidence 998 99999999999888522 111222333444557788888888777621110 113344444444444
Q ss_pred HHHHhCCCeeeCCC-CceE-EEEEc-CCC--------C---hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHH
Q 013521 363 DAFQSLGLKVNGGK-NAPY-VWVQF-PGS--------S---SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHRE 428 (441)
Q Consensus 363 ~~L~~~g~~~~~~~-~~~~-~~~~~-~~~--------~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~ 428 (441)
+.++++|+.+.... +++| +++.- +.. + -..++..++++ ||++.|+.. +. .=+|..++++
T Consensus 341 ~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~~-----ea-~flS~ahte~ 413 (432)
T COG0001 341 AAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQF-----EA-GFLSTAHTEE 413 (432)
T ss_pred HHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCccc-----cc-eeeecccCHH
Confidence 44445577664332 4444 22221 110 1 22455666665 999998641 11 2257778999
Q ss_pred HHHHHHHHHHhh
Q 013521 429 YISEACRRLKNF 440 (441)
Q Consensus 429 ~~~~~l~~l~~~ 440 (441)
++++.++++.++
T Consensus 414 di~~~~~a~~~~ 425 (432)
T COG0001 414 DIDRTLEAADEA 425 (432)
T ss_pred HHHHHHHHHHHH
Confidence 999999988765
No 291
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=3.2e-13 Score=133.72 Aligned_cols=337 Identities=12% Similarity=0.105 Sum_probs=196.7
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~ 145 (441)
.++.++|+..|-. .+ ..+|.+.+++.+.+.+... .....|. .+....+|+.+....+-. .+.++++++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~~-----~~~~~~lAe~L~~~~p~~~~~~v~f~~SGs 125 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLH-YSLTDFY-----YEPAVELAERLVEIAPGGFEKKVFFTNSGT 125 (441)
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccC-ccCcccC-----CHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 4567888876642 22 3578899999998875321 0111121 234455566654322321 36999999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHh-cccc----ccccccCccceeEEeecCCCCC--cc---C-----
Q 013521 146 SDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIV-GQAG----KFLKETGKYRNIVYMNCRPENN--FF---P----- 207 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~----~~~~~~~~~~~v~~v~~~~~~~--~~---~----- 207 (441)
+|... + .......++|+...-+|++....+... +... .+.+.. ..+..++...... +. +
T Consensus 126 EA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (441)
T PRK05769 126 ESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLM---PGVIHVPYPNPYRNPWGIENPEECGN 202 (441)
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCC---CCeEEeCCCccccccccCCchHHHHH
Confidence 99886 4 222334568888899999976444332 2110 010100 1233333311000 00 0
Q ss_pred ----CCC--------CCCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC
Q 013521 208 ----DLS--------TTSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG 273 (441)
Q Consensus 208 ----~~~--------~~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~ 273 (441)
.++ ...++.+|+ ..| +.-.|.. .+.+.+++|.++|++||+++|.||++..|...+.......+.-
T Consensus 203 ~~~~~le~~~~~~~~~~~~iaavi-~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv 281 (441)
T PRK05769 203 AVLDFIEDYLFKKLVPPEEVAAII-VEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV 281 (441)
T ss_pred HHHHHHHHHHHhhccCCCceEEEE-ECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC
Confidence 011 123455544 466 5556765 4688999999999999999999999987654443222222221
Q ss_pred CcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHH
Q 013521 274 AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDY 353 (441)
Q Consensus 274 ~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 353 (441)
.+| ++ +|||.++ .|+++|++++++++. ........ ...+.+++++.++.+.|+. .+. ...++
T Consensus 282 ~pD--iv--t~~K~l~-~G~p~gav~~~~~i~--------~~~~~~~~-~T~~g~p~~~aaa~a~L~~--l~~--~~~~~ 343 (441)
T PRK05769 282 EPD--II--TLAKAIA-GGLPLGAVIGRAELM--------FLPPGSHA-NTFGGNPVAAAAALATLEE--LEE--GLLEN 343 (441)
T ss_pred CCC--EE--EEccccc-CCcccEEEEEehhhh--------hcCCCCCC-CCCCcCHHHHHHHHHHHHH--HHH--HHHHH
Confidence 244 22 5899998 899999999988773 11111122 2334578888888888752 121 55666
Q ss_pred HHHHHHHHHHHHHhC----CCeeeCCCCceEEEEEcCCC-------ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE
Q 013521 354 YKENAKIIVDAFQSL----GLKVNGGKNAPYVWVQFPGS-------SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS 422 (441)
Q Consensus 354 ~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls 422 (441)
.+++-++|.+.|+++ ++......-|.++-+.+... ....+...+++ +||.+.|. +.+.+|++
T Consensus 344 ~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~Gil~~~~------~~~~lr~~ 416 (441)
T PRK05769 344 AQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFK-RGLLLLGA------GKSAIRII 416 (441)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHh-CCcEEecC------CCCEEEEe
Confidence 777777777777654 22111112356666666321 11234445554 59998763 23679998
Q ss_pred e--ecCHHHHHHHHHHHHhhC
Q 013521 423 A--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 423 ~--~~~~~~~~~~l~~l~~~l 441 (441)
. ..+++++++++++|.+++
T Consensus 417 p~l~~t~~~id~~~~~l~~~l 437 (441)
T PRK05769 417 PPLIITEEEADIGLEILEEAI 437 (441)
T ss_pred CCCCCCHHHHHHHHHHHHHHH
Confidence 4 458999999999998763
No 292
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.64 E-value=3.7e-13 Score=129.63 Aligned_cols=297 Identities=12% Similarity=0.094 Sum_probs=183.2
Q ss_pred CCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHH-HhcCCCCEEEEeCCCchhhHhH-HHHhcccccccc
Q 013521 109 GYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQ-MLLGSNVTVAVQDPSFPAYIDT-SVIVGQAGKFLK 186 (441)
Q Consensus 109 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~-~l~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~~~ 186 (441)
.|..++...+|.+++++++ |. +.++.|++++.|++++. ..++|||+| +.++|..-... +...|
T Consensus 66 ~yag~~s~~~lE~~va~~~----G~--~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~G------- 130 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELY----GF--KYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNG------- 130 (450)
T ss_pred hhcCCCcHHHHHHHHHHHH----CC--CeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCC-------
Confidence 4877888999999999996 54 57999999999998754 457999987 66777554443 56666
Q ss_pred ccCccceeEEeecCC--------CCCccCCCCC-----C----CCccEEEEcCCCCc-cccCCCHHHHHHHHHHHHHcCc
Q 013521 187 ETGKYRNIVYMNCRP--------ENNFFPDLST-----T----SRTDIIFFCSPNNP-TGHAATWQQLKKLVEFAKANGS 248 (441)
Q Consensus 187 ~~~~~~~v~~v~~~~--------~~~~~~~~~~-----~----~~~~~v~i~~p~NP-tG~~~~~~~~~~i~~~a~~~~~ 248 (441)
..++-++.++ ......|+++ . .++++|.+.+++|- .|..+|.+++++|.++|++||+
T Consensus 131 -----av~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl 205 (450)
T TIGR02618 131 -----ATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGI 205 (450)
T ss_pred -----eEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCC
Confidence 2333332221 1111223221 1 24557788888874 5899999999999999999999
Q ss_pred EEEEcccccc-c-cc----C--CCCCccc----ccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHH
Q 013521 249 IIVYDSAYAA-Y-IT----D--PSPRSIY----EIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDF 316 (441)
Q Consensus 249 ~ii~De~~~~-~-~~----~--~~~~~~~----~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~ 316 (441)
.||+|.+... . .+ + -...++. ++....| .+..|..|.++.+- -|+++.+++.+ .++.
T Consensus 206 ~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD--~~~~S~~Kd~~~~~--GG~l~~~d~~l-------~~k~ 274 (450)
T TIGR02618 206 KVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD--GCTMSGKKDCLVNI--GGFLCMNDDEM-------FQSA 274 (450)
T ss_pred EEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc--EEEEeeccCCCCCC--ceEEEeCCHHH-------HHHH
Confidence 9999998764 1 11 0 1123442 2211122 58889999887661 27777566554 4444
Q ss_pred HHHHhhh-cC----CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCC----
Q 013521 317 NRIVCTC-FN----GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG---- 387 (441)
Q Consensus 317 ~~~~~~~-~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---- 387 (441)
+...... .+ +.+.-...+..-.|.+. .+ +...++-..+.++|.+.|.+.|+.+..|.+|+.++++...
T Consensus 275 r~~~~~~eG~~tyGgla~r~~~ala~gL~e~-~~--~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph 351 (450)
T TIGR02618 275 KELVVVFEGMPSYGGLAGRDMEAMAIGIREA-VD--YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPH 351 (450)
T ss_pred HHHhhhcCCccccCchhhhhHHHHHHHHHHh-hh--HHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCC
Confidence 4432211 11 11111222222223211 11 1233333345788999999999998777889999998631
Q ss_pred -----CChHHHHHHHHHhcCeEEeC-CCCc-C--CCC-------CCeEEEEee---cCHHHHHHHHHHHHh
Q 013521 388 -----SSSWDVFAEILEKTHILTIP-GSGF-G--PGG-------NEHIRVSAF---GHREYISEACRRLKN 439 (441)
Q Consensus 388 -----~~~~~~~~~ll~~~gi~v~p-g~~f-~--~~~-------~~~iRls~~---~~~~~~~~~l~~l~~ 439 (441)
.....++.+|..+.||--.- |+.. + +.+ -..+|+++- -+.+.++...++|..
T Consensus 352 ~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~ 422 (450)
T TIGR02618 352 IPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIK 422 (450)
T ss_pred CChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHH
Confidence 24567788888888886543 3322 1 111 257999972 266777777776654
No 293
>PLN02452 phosphoserine transaminase
Probab=99.63 E-value=8.4e-13 Score=126.76 Aligned_cols=328 Identities=12% Similarity=0.114 Sum_probs=200.5
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccC-CC---CCCCCCCCcCcHHHHHHHHHHHhhhCCCCCC-cE-EEcCCcHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALST-VK---GYKGYGAEQGNMALRTAIADKFYKDMGIEGD-EI-FISDGAQS 146 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~-~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~I-~~t~G~~~ 146 (441)
.+++|+-|. ...|+.|++++.+.+.++.. .- .+.+. +.-..++-+.+.+.+.+.++++.+ +| ++..|++.
T Consensus 7 ~~~~f~pGP--~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHR--s~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~ 82 (365)
T PLN02452 7 RVFNFSAGP--ATLPANVLAKAQAELYNWEGSGMSVMEMSHR--GKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGAST 82 (365)
T ss_pred ceEeeeCCC--CCCCHHHHHHHHHHHhcccccCccccccCCC--chHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHH
Confidence 467887774 45789999999987655431 01 12233 334455666666666665676432 44 55577788
Q ss_pred HHHH-HHHhcCCCCEEEEeCCCchhh--HhHHHHhccccccccccCccceeEEeecCCCCCc--cCC---CCCCCCccEE
Q 013521 147 DISR-LQMLLGSNVTVAVQDPSFPAY--IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF--FPD---LSTTSRTDII 218 (441)
Q Consensus 147 al~~-l~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~--~~~---~~~~~~~~~v 218 (441)
+++. ++.++.+||++++..-++++- ...++.+|. ..+...... +++ .++ ++..++.+.|
T Consensus 83 ~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v 149 (365)
T PLN02452 83 QFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCK------------TNVIASGKD-EKYTKIPSVSEWELTPDAKFV 149 (365)
T ss_pred HHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC------------CcEEEecCC-CCCCCCCChHHcCCCCCCcEE
Confidence 8887 688999999999888888773 444555552 122221111 121 222 2233578888
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l 298 (441)
.+|+-...||+.+.. +.++. ++++|+|.+.+-. ..|..+..+ + +...|..|.+|.+| +|.+
T Consensus 150 ~~~hnETstGv~~~~--~~~i~------~~~lvVDa~Ss~g---~~pidv~~~----~--v~~~saqK~lGP~G--l~~v 210 (365)
T PLN02452 150 HICANETIHGVEFKD--YPDVG------NVPLVADMSSNFL---SKPVDVSKY----G--VIYAGAQKNVGPSG--VTIV 210 (365)
T ss_pred EECCCCCCCcEecCc--ccccC------CCeEEEECCcccc---CcccCHHHc----C--EEEEecccccCCCC--eEEE
Confidence 888888899996431 44443 3899999987732 223333332 2 33469999999887 8899
Q ss_pred EeeccccccCCch--hHHHHHHH--HhhhcCCCcHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 013521 299 VVPEELRYSNGYP--VIKDFNRI--VCTCFNGASNIVQAGGLACLSPDGFQ-ALRTVIDYYKENAKIIVDAFQSL-GLKV 372 (441)
Q Consensus 299 ~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 372 (441)
+++++++...... ..-.+... ....+++++.....+..++++.-..+ .++.+.++.+++.+++++.|++. |+..
T Consensus 211 ~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~ 290 (365)
T PLN02452 211 IIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYV 290 (365)
T ss_pred EEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 9998886331111 01111111 11222345555544444444311111 35888999999999999999986 6621
Q ss_pred e-CC---CCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec--CHHHHHHHHHHHHhh
Q 013521 373 N-GG---KNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG--HREYISEACRRLKNF 440 (441)
Q Consensus 373 ~-~~---~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~~~~~~l~~l~~~ 440 (441)
. .. ...+.+.+.+++....+.+.+.++++|+...+|..- -+.+|+|+++ +.++++.+++.|+++
T Consensus 291 ~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~----~gg~R~s~yna~~~~~v~~L~~~m~~f 360 (365)
T PLN02452 291 CPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDF 360 (365)
T ss_pred CCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccc----cCceEEECcCCCCHHHHHHHHHHHHHH
Confidence 1 11 244577888875434444455566679999999753 1239999754 889999999999875
No 294
>PLN03032 serine decarboxylase; Provisional
Probab=99.62 E-value=3.3e-13 Score=129.62 Aligned_cols=315 Identities=14% Similarity=0.092 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHh-hccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcE--EEcCCcHHHHHH-HHHhc--CCCCEE
Q 013521 88 DIITSAMAEHAF-ALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEI--FISDGAQSDISR-LQMLL--GSNVTV 161 (441)
Q Consensus 88 ~~~~~al~~~~~-~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I--~~t~G~~~al~~-l~~l~--~~gd~V 161 (441)
...++++.+.+. .+++....+.| .....++.+.+.+|+.+.++.+++++ ++|+|+|++... +.... .++..|
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~--g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~v 114 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNY--GVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGIL 114 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCC--CccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEE
Confidence 345666766654 34442333333 23456777777777777678888887 999999999875 43322 355689
Q ss_pred EEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC-----CCCccEEEEcCCCCccccCCCHHH
Q 013521 162 AVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST-----TSRTDIIFFCSPNNPTGHAATWQQ 235 (441)
Q Consensus 162 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~-----~~~~~~v~i~~p~NPtG~~~~~~~ 235 (441)
+++.-.|.++...++.+| ..+..+|++.++..+++ +++ ..++.+|+++..+|+||.+-|
T Consensus 115 i~s~~~H~Sv~kaa~~lg------------~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp--- 179 (374)
T PLN03032 115 YASRESHYSVFKAARMYR------------MEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD--- 179 (374)
T ss_pred EeCCCceeHHHHHHHHcC------------CCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---
Confidence 999999999999999998 46778888776544333 211 124667777778999999988
Q ss_pred HHHHHHHHHHcC-----cEEEEcccccccccC--CCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccC
Q 013521 236 LKKLVEFAKANG-----SIIVYDSAYAAYITD--PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN 308 (441)
Q Consensus 236 ~~~i~~~a~~~~-----~~ii~De~~~~~~~~--~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~ 308 (441)
+++|+++|+++| +++.+|.+++.+... .. .+...+. .....+.-|.+|..+ ....+|.++.+++.+..-
T Consensus 180 i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~-~~~~~~~--~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~~~ 255 (374)
T PLN03032 180 LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSR-APEVTFR--KPIGSVSVSGHKFLG-CPMPCGVALTRKKHVKAL 255 (374)
T ss_pred HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCC-CcccCCC--cCCcEEEECcccccC-CCcCeEEEEEEchhhHhh
Confidence 788888899996 589999999753221 11 1111121 123467778999987 566799999987664110
Q ss_pred CchhHHHHHHHHhhhcCCC-cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCC
Q 013521 309 GYPVIKDFNRIVCTCFNGA-SNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPG 387 (441)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 387 (441)
. .....+.. ...+..+. +.....++-+.|...+.+.+.++.+..-+..+++.+.|++.+++....+..+.+.++-+.
T Consensus 256 ~-~~~~Yl~~-~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~f~~~~ 333 (374)
T PLN03032 256 S-QNVEYLNS-RDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVVFERPM 333 (374)
T ss_pred c-cCCcccCC-CCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEEEcCCC
Confidence 0 00000000 00011111 122233333444445566778888899999999999999888887655566666666552
Q ss_pred CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEee--cCHHHHHHHHHHHHhh
Q 013521 388 SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAF--GHREYISEACRRLKNF 440 (441)
Q Consensus 388 ~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~--~~~~~~~~~l~~l~~~ 440 (441)
... +. + |-.+.+ ..+.+|+++. .+++.++++++-|++.
T Consensus 334 --~~~----~~-~-~w~l~~-------~~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 334 --DEA----FI-K-KWQLAC-------EGDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred --cHh----Hh-h-eeeecc-------cCCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 111 22 2 444443 1247999973 3678899999988763
No 295
>PRK04311 selenocysteine synthase; Provisional
Probab=99.61 E-value=7.7e-13 Score=130.52 Aligned_cols=315 Identities=16% Similarity=0.147 Sum_probs=179.8
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCC-CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEE
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYG-AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAV 163 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv 163 (441)
+.++.+.+++.+.+..+.+.......+ ...-...+++.+|++. |. +..++++++++|+.++...+.+||+|++
T Consensus 97 ~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~----Ga--e~a~vv~sgtaAl~l~l~~l~~GdeVIv 170 (464)
T PRK04311 97 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT----GA--EDALVVNNNAAAVLLALNALAAGKEVIV 170 (464)
T ss_pred CCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHhCCCCEEEE
Confidence 467899999999887543211000000 0112357788888875 54 4577788888999875566799999999
Q ss_pred eCCCchh------hHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCc--cc--cCC
Q 013521 164 QDPSFPA------YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNP--TG--HAA 231 (441)
Q Consensus 164 ~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NP--tG--~~~ 231 (441)
....+.. +.......| .+++.++.+.... ..+++. .+++++|++.+++|| +| ...
T Consensus 171 s~~e~~~~ggs~~i~~~~~~~G------------~~l~~v~~~~~t~-~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~ 237 (464)
T PRK04311 171 SRGELVEIGGAFRIPDVMRQAG------------ARLVEVGTTNRTH-LRDYEQAINENTALLLKVHTSNYRIEGFTKEV 237 (464)
T ss_pred cchhhhhcCcchhhHHHHHHCC------------cEEEEECCCCCCC-HHHHHHhcCccCeEEEEEcCCCccccccCCcC
Confidence 8765431 122344456 4777776543211 122222 468999999999998 34 445
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccc----cC--CCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccc
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAYI----TD--PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELR 305 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~~----~~--~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~ 305 (441)
+ +++|+++|++||+++|+|...+.+. +. ..| .+...- ..+..+++.|.+|.+| |...|+++++++++
T Consensus 238 d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p-~~~~~l-~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~li 310 (464)
T PRK04311 238 S---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP-TVQELL-AAGVDLVTFSGDKLLG--GPQAGIIVGKKELI 310 (464)
T ss_pred C---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC-chhhHH-hcCCcEEEecCccccc--CCceEEEEEcHHHH
Confidence 6 9999999999999999999654321 11 112 222210 1234599999999986 34699999988774
Q ss_pred ccCCchhHHHHHHH---HhhhcCCCcHHHHHHHHHhcCCCc--------HHHHHHHHHHHHHHHHHHHHHHHhC---CC-
Q 013521 306 YSNGYPVIKDFNRI---VCTCFNGASNIVQAGGLACLSPDG--------FQALRTVIDYYKENAKIIVDAFQSL---GL- 370 (441)
Q Consensus 306 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~--------~~~~~~~~~~~~~~~~~l~~~L~~~---g~- 370 (441)
+++... +.............+.+..+.+.. .+-+....+..+++.+.+.+.|+.+ ++
T Consensus 311 --------~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~ 382 (464)
T PRK04311 311 --------ARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFA 382 (464)
T ss_pred --------HHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCee
Confidence 222210 000001111112222222221111 1223444567777888888888775 22
Q ss_pred -eeeCC----CC---------ceEEEEEcCCCChHHHHHHHHHhcC--eEEeCCCCcCCCCCCeEEEEee-cCHHHHHHH
Q 013521 371 -KVNGG----KN---------APYVWVQFPGSSSWDVFAEILEKTH--ILTIPGSGFGPGGNEHIRVSAF-GHREYISEA 433 (441)
Q Consensus 371 -~~~~~----~~---------~~~~~~~~~~~~~~~~~~~ll~~~g--i~v~pg~~f~~~~~~~iRls~~-~~~~~~~~~ 433 (441)
++... .+ +.-+.++..+....++ ...|++.. |..+ ..++.+.+.+- -.+++++.+
T Consensus 383 ~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l-~~~lr~~~~~i~~r-------~~~~~~~ld~r~~~~~~~~~~ 454 (464)
T PRK04311 383 VEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEAL-AARLRLLPPPVIGR-------IEDGRLLLDLRTLEEEDEERL 454 (464)
T ss_pred EEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHH-HHHHhcCCCCEEEE-------EECCEEEEEeCcCCHHHHHHH
Confidence 33221 01 1123333223334444 44455533 3332 23566777763 378899999
Q ss_pred HHHHHhhC
Q 013521 434 CRRLKNFL 441 (441)
Q Consensus 434 l~~l~~~l 441 (441)
+++|++++
T Consensus 455 ~~~~~~~~ 462 (464)
T PRK04311 455 AAALLEAL 462 (464)
T ss_pred HHHHHHHh
Confidence 99988763
No 296
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.61 E-value=7.6e-13 Score=139.81 Aligned_cols=341 Identities=16% Similarity=0.145 Sum_probs=202.5
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCC--cCc----HHHHHHHHHHHh
Q 013521 55 FPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAE--QGN----MALRTAIADKFY 128 (441)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~--~g~----~~lr~~ia~~l~ 128 (441)
..++.+.......+.. .-...++.|.++.-.|+.+.+++.+...-+ ..+.-|++. +|. .+++..||+.
T Consensus 87 E~e~~~~~~~la~kN~-~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~---TaytPYqaEisQG~lqal~~~Qt~ia~L-- 160 (993)
T PLN02414 87 ESQMLEHMKSLASKNK-VFKSYIGMGYYNTHVPPVILRNILENPGWY---TQYTPYQAEIAQGRLESLLNYQTMITDL-- 160 (993)
T ss_pred HHHHHHHHHHHHhcCC-ccccccCCCCCCccCCHHHHHHHHhChHHH---hhcCCCchHHHHHHHHHHHHHHHHHHHH--
Confidence 3444444444443322 122345666666667788878887754321 233445543 453 3344555554
Q ss_pred hhCCCCCCcEEEcCCcHHHHHH-HHHh-cCCC--CEEEEeCCCchhhHhHHHHhcc-ccccccccCccceeEEeecCCCC
Q 013521 129 KDMGIEGDEIFISDGAQSDISR-LQML-LGSN--VTVAVQDPSFPAYIDTSVIVGQ-AGKFLKETGKYRNIVYMNCRPEN 203 (441)
Q Consensus 129 ~~~~~~~~~I~~t~G~~~al~~-l~~l-~~~g--d~Vlv~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~v~~v~~~~~~ 203 (441)
.|.+++++.++.|++++.+. ++++ +.+| |+|++.+-.||.....++.... .| ++++.++.+..
T Consensus 161 --tG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~G---------ieV~~v~~~~~- 228 (993)
T PLN02414 161 --TGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLG---------LEVVVADEKDF- 228 (993)
T ss_pred --hCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcC---------CEEEEecchhh-
Confidence 58999999999999999997 4444 4544 7899999999998777755422 22 47888876431
Q ss_pred CccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEec
Q 013521 204 NFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283 (441)
Q Consensus 204 ~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S 283 (441)
+ .. ...+-.+++.+|++ +|.+.+ +++|+++|+++|+++++ .++.. .... -.+..++ +.+|++++
T Consensus 229 ~----~~-~~~v~~vlvq~P~~-~G~v~d---v~~I~~~ah~~GaL~iV-aad~l-al~~-l~~pge~----GADi~vgs 292 (993)
T PLN02414 229 D----YS-SGDVCGVLVQYPAT-DGEVLD---YAEFVKNAHANGVKVVM-ATDLL-ALTM-LKPPGEW----GADIVVGS 292 (993)
T ss_pred c----cc-cCceEEEEEecCCC-CeEEcC---HHHHHHHHHHcCCEEEE-EECHH-HhcC-CCCHhhc----cCcEEEEC
Confidence 1 01 12343445545544 999988 88999999999999999 44431 1111 0112222 34589999
Q ss_pred CCccc---CCccceeEEEEeeccccccCCc-hh-------------------HHHHHHHHhhhcCCCcHHHHHHHHHhc-
Q 013521 284 FSKFA---GFTGVRLGWTVVPEELRYSNGY-PV-------------------IKDFNRIVCTCFNGASNIVQAGGLACL- 339 (441)
Q Consensus 284 ~SK~~---~~~G~r~G~l~~~~~~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~a~~~~l- 339 (441)
..|+. |..|.+.|++.+.+++... .+ .+ +.+-.+....+.+-.+..+..++++.+
T Consensus 293 gqKwg~P~G~GGP~aGflavr~~~~r~-~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y 371 (993)
T PLN02414 293 AQRFGVPMGYGGPHAAFLATSQEYKRL-MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMY 371 (993)
T ss_pred CCccccCCCCCCCCeeEEEECHHHHhh-CCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHH
Confidence 99986 2245569999998876421 11 00 001001111111111111222223211
Q ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCe
Q 013521 340 -SPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEH 418 (441)
Q Consensus 340 -~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~ 418 (441)
.-.+...+++..++..++..++.+.|.+.|+++..++-..-+.++++ ...++.++|++ +||.++.-. .+.
T Consensus 372 ~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~vt~~~~--~~~~v~~~L~~-~gI~l~~~~------~~~ 442 (993)
T PLN02414 372 AVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTVKVKCS--DADAIADAAAK-VGINLRVVD------ANT 442 (993)
T ss_pred HHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeEEEecC--CHHHHHHHHHH-CCCeeEEec------CCe
Confidence 11111335777888889999999999888877754322223555654 44667777665 599776421 457
Q ss_pred EEEEe--ecCHHHHHHHHHHHHh
Q 013521 419 IRVSA--FGHREYISEACRRLKN 439 (441)
Q Consensus 419 iRls~--~~~~~~~~~~l~~l~~ 439 (441)
+|+|+ .++++|++.+++.|..
T Consensus 443 lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 443 VTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred EEEEeeccCCHHHHHHHHHHHcc
Confidence 99997 5689999999999863
No 297
>PRK07678 aminotransferase; Validated
Probab=99.61 E-value=1.1e-12 Score=130.25 Aligned_cols=343 Identities=13% Similarity=0.082 Sum_probs=191.7
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|- ..+ ..+|.+.+++.+.+.+.... ...|. . +....+|+.+.+..+. .+.+++++++++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~--~~~~~-~----~~~~~lae~l~~~~~~-~~~v~f~~sGse 116 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYF--PLTQS-H----EPAIKLAEKLNEWLGG-EYVIFFSNSGSE 116 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcc--ccccC-C----HHHHHHHHHHHHhCCC-CCEEEEeCCcHH
Confidence 456788887663 222 36789999999988754210 11221 2 2233444444332332 358999999999
Q ss_pred HHHH-HH--H-hc---C-CC-CEEEEeCCCchhhHhHHHHhccccc----cccccCccceeEEeecCCCCCcc-------
Q 013521 147 DISR-LQ--M-LL---G-SN-VTVAVQDPSFPAYIDTSVIVGQAGK----FLKETGKYRNIVYMNCRPENNFF------- 206 (441)
Q Consensus 147 al~~-l~--~-l~---~-~g-d~Vlv~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~v~~v~~~~~~~~~------- 206 (441)
|... +. . .. + +| .+|+...-+|++....+........ +.+.. ..+..++........
T Consensus 117 A~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 193 (451)
T PRK07678 117 ANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLA---PGFLHVPPPDCYRMPGIESEDI 193 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCC---CCCEEeCCCccccccccCChHH
Confidence 9885 42 1 22 1 23 5788899999996544433221100 00000 122223221100000
Q ss_pred --C----CCC-----C-CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccC
Q 013521 207 --P----DLS-----T-TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIP 272 (441)
Q Consensus 207 --~----~~~-----~-~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~ 272 (441)
. .++ . .+++.+|++ .| +.-.|.+ .|++.++++.++|++||+++|.||++..|...+.......+.
T Consensus 194 ~~~~~~~~l~~~~~~~~~~~iAAvi~-EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~g 272 (451)
T PRK07678 194 YDLECVKEIDRVMTWELSETIAAVIM-EPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYG 272 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEE-ccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcC
Confidence 0 011 1 234556554 66 4445655 588899999999999999999999998775443222222232
Q ss_pred CCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH------HHhhhcCCCcHHHHHHHHHhcCCCcHH
Q 013521 273 GAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR------IVCTCFNGASNIVQAGGLACLSPDGFQ 345 (441)
Q Consensus 273 ~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~ 345 (441)
-.|| +-+++|.+| .| +.+|.+++++++. +.+.. +....+++.++++..++.+.|+.-..
T Consensus 273 v~PD----ivt~gK~lg-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~- 338 (451)
T PRK07678 273 VKPD----IITMAKGIT-SAYLPLSATAVKKEIY--------EAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN- 338 (451)
T ss_pred CCCC----EEEeecccc-cCCcceeEEEEcHHHH--------HHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh-
Confidence 2355 336899998 77 6999999988873 33321 12234455788888888888762111
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----hCCCeeeCCCCceEEEEEcCC-C------C---hHHHHHHHHHhcCeEEeCCCCc
Q 013521 346 ALRTVIDYYKENAKIIVDAFQ----SLGLKVNGGKNAPYVWVQFPG-S------S---SWDVFAEILEKTHILTIPGSGF 411 (441)
Q Consensus 346 ~~~~~~~~~~~~~~~l~~~L~----~~g~~~~~~~~~~~~~~~~~~-~------~---~~~~~~~ll~~~gi~v~pg~~f 411 (441)
+.+.++.++.-+++.+.|+ ++++.......|.++-+.+.. . + ...+...+++ +||.+.+....
T Consensus 339 --~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~-~Gv~~~~~g~~ 415 (451)
T PRK07678 339 --ENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKE-KGLIIGKNGDT 415 (451)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHH-CCcEEeecCcc
Confidence 1233444444445544443 334322111245555566521 0 1 1234445554 59999763221
Q ss_pred CCCCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 412 GPGGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 412 ~~~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
.+...+.+||+- ..+++++++++++|.+++
T Consensus 416 v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l 447 (451)
T PRK07678 416 VAGYNNVLTLSPPLVISSEEIAFIVGTLKTAL 447 (451)
T ss_pred ccCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 122346799984 558999999999998764
No 298
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=2.4e-12 Score=127.75 Aligned_cols=340 Identities=12% Similarity=0.088 Sum_probs=194.9
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|. ..+ ..+|.+.+++.+.+.+... ....|.+. +.+..+|+.+.+..+...+.+.+++++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~--~~~~~~~~----~~~~~lae~L~~~~p~~~~~v~f~~SGsE 124 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQH--SMIGYTHS----ERAIRVAEKLAEISPIENPKVLFGLSGSD 124 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccc--cccCccCC----HHHHHHHHHHHhhCCCCcCEEEEeCchHH
Confidence 456788887764 222 3678899999998875321 11122222 23334444443323333368999999999
Q ss_pred HHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHh-ccc----cccccccCccceeEEeecCCCCC--c------cC---
Q 013521 147 DISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIV-GQA----GKFLKETGKYRNIVYMNCRPENN--F------FP--- 207 (441)
Q Consensus 147 al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~----~~~~~~~~~~~~v~~v~~~~~~~--~------~~--- 207 (441)
|... + .........|+....+|++....+..+ +.. ..+.+.. -.+..+|...... + .+
T Consensus 125 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~ 201 (457)
T PRK05639 125 AVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM---PNVVWIPYPNPYRNPWGINGYEEPDEL 201 (457)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC---CCceEeCCCccccccccccccCCHHHH
Confidence 9886 4 223344567888999999965443332 210 0111100 1244444321100 0 00
Q ss_pred ------CCC--------CCCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc
Q 013521 208 ------DLS--------TTSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI 271 (441)
Q Consensus 208 ------~~~--------~~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~ 271 (441)
.++ ...++.++++ .| +...|.+ .|.+.+++|.++|++||+++|.||++..|...+.......+
T Consensus 202 ~~~~~~~le~~l~~~~~~~~~iAAvI~-EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~ 280 (457)
T PRK05639 202 INRFLDYLENYVFSHVVPPDEVAALFA-EPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWF 280 (457)
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhc
Confidence 011 1245556554 66 5556764 57899999999999999999999999865433321111122
Q ss_pred CCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHH
Q 013521 272 PGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVI 351 (441)
Q Consensus 272 ~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 351 (441)
.-.+| |++ |+|.++ .|+.+|.+++++++. +.... ....+.+.+++...++.+.++.-.. +...
T Consensus 281 gv~PD--iv~--~gK~l~-gG~pi~av~~~~~i~--------~~~~~-~~~~T~~g~p~~~aaa~a~l~~l~~---~~l~ 343 (457)
T PRK05639 281 EVKPD--LII--FGKGVA-SGMGLSGVIGRKELM--------DLTSG-SALLTPAANPVISAAAEATLEIIEE---ENLL 343 (457)
T ss_pred CCCCC--EEE--echhhc-CCCcceeEEehHHHH--------hhcCC-CcccCCCcCHHHHHHHHHHHHHHHH---ccHH
Confidence 22344 333 899998 889999999988874 21111 1112334677777777777752111 2334
Q ss_pred HHHHHHHHHHHHHHHh----CCCeeeCCCCceEEEEEcCC-C---C---hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEE
Q 013521 352 DYYKENAKIIVDAFQS----LGLKVNGGKNAPYVWVQFPG-S---S---SWDVFAEILEKTHILTIPGSGFGPGGNEHIR 420 (441)
Q Consensus 352 ~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~-~---~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iR 420 (441)
++.++.-++|.+.|++ +++......-|.++-+.+.. . + ...+...+++ +|+.+.+.. ...+.+|
T Consensus 344 ~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~g----~~~~~lr 418 (457)
T PRK05639 344 KNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFE-LGLILPSYG----MFGNVIR 418 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHh-CCeEEeecC----CCCCEEE
Confidence 4444555666666655 33222111245666666521 1 1 2234455554 599997641 1246899
Q ss_pred EE--eecCHHHHHHHHHHHHhhC
Q 013521 421 VS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 421 ls--~~~~~~~~~~~l~~l~~~l 441 (441)
+. +..+++++++++++|.+++
T Consensus 419 ~~Ppl~it~~~id~~~~~l~~~l 441 (457)
T PRK05639 419 ITPPLVITKEIAEKGLEIMERAI 441 (457)
T ss_pred EeCCCccCHHHHHHHHHHHHHHH
Confidence 98 4568999999999998763
No 299
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.60 E-value=5.2e-13 Score=132.54 Aligned_cols=338 Identities=12% Similarity=0.092 Sum_probs=187.8
Q ss_pred CCCCCeEEeCCCCCC--C-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcH
Q 013521 69 HPDARLIRLGIGDTT--Q-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQ 145 (441)
Q Consensus 69 ~~~~~~i~l~~g~~~--~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~ 145 (441)
..++..||+..|-.. + ..+|.+.+++.+.+.+.. .+.. ..++...+|+.+.+..+- .+.+.++++++
T Consensus 96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~------~~~~---~~~~~~~lAe~l~~~~p~-~~~v~f~~SGs 165 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT------SFGA---PCLLENVLAEMVIDAVPS-VEMVRFVNSGT 165 (474)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCC------CCCC---CCHHHHHHHHHHHHhCCC-CCEEEEeCChH
Confidence 346778888766422 2 367899999999887521 1211 123455566666543332 57999999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHhcccccc----c-cccCc---cceeEEeecCCCCCccCCCCCC-C
Q 013521 146 SDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKF----L-KETGK---YRNIVYMNCRPENNFFPDLSTT-S 213 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----~-~~~~~---~~~v~~v~~~~~~~~~~~~~~~-~ 213 (441)
+|... + .......++|+...-+|++....+......+.. . ..... ...+..++.++.+.+...++.. .
T Consensus 166 EA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~ 245 (474)
T PLN02482 166 EACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKG 245 (474)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCC
Confidence 99886 3 223334568888899999965332211000000 0 00000 0012223322111110011111 3
Q ss_pred CccEEEEcCC-CCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCc
Q 013521 214 RTDIIFFCSP-NNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFT 291 (441)
Q Consensus 214 ~~~~v~i~~p-~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~ 291 (441)
++.+|+ ..| +.-.|.+.+ ++.+++|.++|++||+++|.||++..| ..+.......+.-.+| +.+|+|.+| .
T Consensus 246 ~iAavI-~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PD----i~t~gK~lg-g 318 (474)
T PLN02482 246 EIAAVI-LEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPD----LTTLGKVIG-G 318 (474)
T ss_pred ceEEEE-ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCC----EEEecchhh-C
Confidence 455544 556 555787655 788999999999999999999999766 3222111111222344 347899998 8
Q ss_pred cceeEEEEeeccccccCCchhHHHHHH---HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 292 GVRLGWTVVPEELRYSNGYPVIKDFNR---IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 292 G~r~G~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
|+.+|.++++++++ +.+.. .....+.+.+++...++.+.|+.-.. +...++.+++-+++.+.|++.
T Consensus 319 G~Pigav~g~~ei~--------~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 319 GLPVGAYGGRREIM--------EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEA 387 (474)
T ss_pred CCceEEEEEcHHHH--------HhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHH
Confidence 99999999887773 33321 11122333577777777777652111 234455555555555555543
Q ss_pred ----CCeee-CCCCceE-EEEEcCC---------CC---hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHH
Q 013521 369 ----GLKVN-GGKNAPY-VWVQFPG---------SS---SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYI 430 (441)
Q Consensus 369 ----g~~~~-~~~~~~~-~~~~~~~---------~~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~ 430 (441)
++.+. ....+++ +.+.-+. .+ ...+...+++ +||.+.|... . .++ +++..+++++
T Consensus 388 ~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~~~~~~~-~---~~~--psl~ht~~dI 460 (474)
T PLN02482 388 GKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVYLAPSQF-E---AGF--TSLAHTEEDI 460 (474)
T ss_pred HHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeEEeccCC-C---CCc--CCCCCCHHHH
Confidence 44433 2224433 2222111 01 1234555555 5999987421 1 111 5667799999
Q ss_pred HHHHHHHHhhC
Q 013521 431 SEACRRLKNFL 441 (441)
Q Consensus 431 ~~~l~~l~~~l 441 (441)
+++++++.+++
T Consensus 461 d~~l~al~~~l 471 (474)
T PLN02482 461 DFTIAAAERVL 471 (474)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 300
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.60 E-value=2.2e-12 Score=124.62 Aligned_cols=293 Identities=12% Similarity=0.144 Sum_probs=179.3
Q ss_pred CCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHH-HhcCCCCEEEEeCCCchhhHhH-HHHhcccccccc
Q 013521 109 GYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQ-MLLGSNVTVAVQDPSFPAYIDT-SVIVGQAGKFLK 186 (441)
Q Consensus 109 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~-~l~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~~~ 186 (441)
.|..++...+|.+++++++ |. +.++.|+.++.|+.++. ..++|||.| +..+|..-... +...|
T Consensus 73 ~Yagd~s~~~LE~~vAe~l----G~--e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~G------- 137 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY----GF--KHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNG------- 137 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH----CC--CeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCC-------
Confidence 4877888999999999997 54 46999999999988753 347999975 44444443333 44455
Q ss_pred ccCccceeEEeecC-----------CCCCccCCCCC---------CCCccEEEEcCCCCcc-ccCCCHHHHHHHHHHHHH
Q 013521 187 ETGKYRNIVYMNCR-----------PENNFFPDLST---------TSRTDIIFFCSPNNPT-GHAATWQQLKKLVEFAKA 245 (441)
Q Consensus 187 ~~~~~~~v~~v~~~-----------~~~~~~~~~~~---------~~~~~~v~i~~p~NPt-G~~~~~~~~~~i~~~a~~ 245 (441)
.. ++++. +. .+..|+++ .++++++.+.+++|.. |+..|.+++++|.++|++
T Consensus 138 -----a~--fvDi~~d~a~~~~~~~p~-tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~ 209 (460)
T PRK13237 138 -----GI--FVDIIIDEAHDAQSDHPF-KGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDK 209 (460)
T ss_pred -----cE--EEeeecccccccccCCCC-CCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHH
Confidence 22 22221 11 22233221 1345567777888888 799999999999999999
Q ss_pred cCcEEEEccccccc-c-c-----CC-CCCccc----ccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhH
Q 013521 246 NGSIIVYDSAYAAY-I-T-----DP-SPRSIY----EIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVI 313 (441)
Q Consensus 246 ~~~~ii~De~~~~~-~-~-----~~-~~~~~~----~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 313 (441)
||+.||+|.++..- . + .+ ...++. ++.... .....|++|.++.+ . -|+++++++.+ .
T Consensus 210 ~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~a--D~~t~S~~K~~~~~-~-GG~i~t~D~eL-------~ 278 (460)
T PRK13237 210 HGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYA--DGCTMSGKKDCLVN-I-GGFLAMNDEEL-------F 278 (460)
T ss_pred cCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcC--cEEEEeCCCCCCCC-C-ceEEEECCHHH-------H
Confidence 99999999987632 1 0 00 122332 111112 26777899998754 1 38999887765 4
Q ss_pred HHHHHHHhh-----hcCCCcHHHHHH-HHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcC-
Q 013521 314 KDFNRIVCT-----CFNGASNIVQAG-GLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFP- 386 (441)
Q Consensus 314 ~~~~~~~~~-----~~~~~~~~~~~a-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~- 386 (441)
++.+...-. ++.+.+.--..+ +..+.+-... ...+.--++.++|.+.|.+.|+.+..|.+|.-++++..
T Consensus 279 ~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~----~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~ 354 (460)
T PRK13237 279 DEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQY----EYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARR 354 (460)
T ss_pred HHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchH----HHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHH
Confidence 444443211 111221211222 2222221111 33333334678899999999999988889988988753
Q ss_pred --------CCChHHHHHHHHHhcCeEEeC-CCCc-C--CCC-------CCeEEEEee---cCHHHHHHHHHHHHh
Q 013521 387 --------GSSSWDVFAEILEKTHILTIP-GSGF-G--PGG-------NEHIRVSAF---GHREYISEACRRLKN 439 (441)
Q Consensus 387 --------~~~~~~~~~~ll~~~gi~v~p-g~~f-~--~~~-------~~~iRls~~---~~~~~~~~~l~~l~~ 439 (441)
......++.+|..+.||--.- |+.. + +.+ -..+|+++- -+.+.++...++|..
T Consensus 355 ~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~ 429 (460)
T PRK13237 355 FLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIK 429 (460)
T ss_pred hCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHH
Confidence 124567888888888886542 3321 1 111 257999972 266777777666654
No 301
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.60 E-value=1.1e-12 Score=126.30 Aligned_cols=324 Identities=11% Similarity=0.075 Sum_probs=187.6
Q ss_pred CCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..|. ..+ ..+|.+.+++++.+.+... ....|. .....++.+.++++ .+ .+.+++++++++|
T Consensus 23 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~~~-~~~~~~la~~l~~~----~~--~~~v~~~~SGseA 93 (364)
T PRK04013 23 GRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVV--AGPMFE-HEEKEEMLEELSKW----VN--YEYVYMGNSGTEA 93 (364)
T ss_pred CCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCC--ccCCcC-CHHHHHHHHHHHhh----cC--CCEEEEeCchHHH
Confidence 45688886653 222 3568899999998876421 111232 23344555555554 23 3689999999999
Q ss_pred HHH-HH--HhcCCCCEEEEeCCCchhhHhHHHHh-ccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEc
Q 013521 148 ISR-LQ--MLLGSNVTVAVQDPSFPAYIDTSVIV-GQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFC 221 (441)
Q Consensus 148 l~~-l~--~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~ 221 (441)
+.. +. ......++|+....+|++....+... +....-.........+..++..+. .++++ .+++++|++.
T Consensus 94 ~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~----~~l~~~i~~~~aAvivE 169 (364)
T PRK04013 94 VEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDV----EAAKEAITKETAAVIFE 169 (364)
T ss_pred HHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCH----HHHHHHhcCCcEEEEEc
Confidence 986 42 22233389999999999865443332 111000000000012333333211 11111 2467777664
Q ss_pred CCCCcccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
..+...|. ..+++.+++|.++|++||+++|+||++..+ ..+.......+.-.|| +-+++|.+| .|+.+|.++.
T Consensus 170 pi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PD----iv~~gK~lg-gG~P~~a~~~ 243 (364)
T PRK04013 170 PIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPD----IVTMGKGIG-NGVPVSLTLT 243 (364)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCC----EEEeccccc-CCceeEEEEe
Confidence 43554555 457789999999999999999999999876 4333222222322345 345799998 7899999988
Q ss_pred eccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE
Q 013521 301 PEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY 380 (441)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 380 (441)
+.++. . .....+++.++++..++.+.++--.. +.+.++.++. + +.+..-.+.-.. .-|.+
T Consensus 244 ~~~~~--------~----~~~~~T~~gnp~~~aaa~a~l~~i~~---~~l~~~~~~~---l-~~l~~~~v~~vR-G~Gl~ 303 (364)
T PRK04013 244 NFDVE--------R----GKHGSTFGGNPLACKAVAVTLRILRR---ERLVEKAGEK---F-IEIKGERVVTTR-GRGLM 303 (364)
T ss_pred ccccc--------C----CCcCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHH---H-HHhccCcceeee-eCcEE
Confidence 76641 1 11233445788888888887762111 1111211111 2 122211111122 24677
Q ss_pred EEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 381 VWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 381 ~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+-+++.. ....+...+++ +|+.+.+. +.+.+|+. +..+++++++++++|.+++
T Consensus 304 ~gve~~~-~~~~i~~~~~~-~Gll~~~~------g~~vlr~~Ppl~it~~~i~~~~~~l~~~l 358 (364)
T PRK04013 304 IGIVLKK-PVGKYVEELQN-RGYLVHTA------GQRVIRLLPPLIISKDTMEEAKSAIEGVI 358 (364)
T ss_pred EEEEeCC-cHHHHHHHHHh-CCcEEeeC------CCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 7777753 23455556555 59998763 24679998 4568999999999998764
No 302
>PRK05965 hypothetical protein; Provisional
Probab=99.59 E-value=1.1e-12 Score=130.43 Aligned_cols=340 Identities=12% Similarity=0.082 Sum_probs=193.6
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|-. .+ ..+|.+.+++.+.+.+........++. .+.+..+|+.+....+-+.+.+++++++++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~-----~~~~~~lae~L~~~~p~~~~~v~f~~sGSE 118 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFG-----SEPAIRLAAKLAERAPGSLNHVYFTLGGSD 118 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccC-----CHHHHHHHHHHHhhCCCCcCEEEEeCChhH
Confidence 3567888866532 22 357899999999887642111111221 223334555544323334568999999999
Q ss_pred HHHH-HH--Hhc----C-C-CCEEEEeCCCchhhHhHHHHh-ccc---cccccccCccceeEEeecCCC--CCccCC---
Q 013521 147 DISR-LQ--MLL----G-S-NVTVAVQDPSFPAYIDTSVIV-GQA---GKFLKETGKYRNIVYMNCRPE--NNFFPD--- 208 (441)
Q Consensus 147 al~~-l~--~l~----~-~-gd~Vlv~~p~y~~~~~~~~~~-g~~---~~~~~~~~~~~~v~~v~~~~~--~~~~~~--- 208 (441)
|+.. +. ... + + ..+|+....+|++........ +.. ..+-+.. ..+..++.... ..+..+
T Consensus 119 Ave~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 195 (459)
T PRK05965 119 AVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPL---PWQHKIPSPYPYRNPVGDDPQA 195 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCC---CCCEEcCCCcccccccCCChHH
Confidence 9886 42 222 1 2 357899999999975433222 211 0000000 01222222110 000001
Q ss_pred --------CCC------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccC
Q 013521 209 --------LST------TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIP 272 (441)
Q Consensus 209 --------~~~------~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~ 272 (441)
+++ .+++.+|++ .| +...|.+ .|.+.+++|.++|++||+++|.||+...|...+.......+.
T Consensus 196 ~~~~~~~~l~~~i~~~~~~~iAAvIv-EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~g 274 (459)
T PRK05965 196 IIAASVAALRAKVAELGADNVAAFFC-EPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEG 274 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEE-eccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcC
Confidence 111 134555554 55 6556764 688999999999999999999999998775444322222232
Q ss_pred CCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH-------HHhhhcCCCcHHHHHHHHHhcCCCcH
Q 013521 273 GAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR-------IVCTCFNGASNIVQAGGLACLSPDGF 344 (441)
Q Consensus 273 ~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~ 344 (441)
-.|| |-+++|.++ .| +.+|.+++++++. +.+.. .....+++.++++..++.+.|+--..
T Consensus 275 v~PD----iv~~gKgl~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~ 341 (459)
T PRK05965 275 VVPD----LMTVAKGLT-SGYVPMGAVLMSDHVY--------QGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE 341 (459)
T ss_pred CCCC----eEEechhhc-cCCcceeEEEEcHHHH--------HHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 2355 334899998 88 5999999988873 33321 11223445788888888887752111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC---CCeeeCCCCceEEEEEcCC-C------C-----hHHHHHHHHHhcCeEEeCCC
Q 013521 345 QALRTVIDYYKENAKIIVDAFQSL---GLKVNGGKNAPYVWVQFPG-S------S-----SWDVFAEILEKTHILTIPGS 409 (441)
Q Consensus 345 ~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~-~------~-----~~~~~~~ll~~~gi~v~pg~ 409 (441)
+++.++.++.-+++.+.|+++ .+......-|.++-+++.. . . ...+...++ ++||.+.+.
T Consensus 342 ---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gll~~~~- 416 (459)
T PRK05965 342 ---GGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAY-ANGLVFRAF- 416 (459)
T ss_pred ---ccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHH-hCCeEEEec-
Confidence 334455556666666666654 2111111245665666531 0 0 123444444 559999752
Q ss_pred CcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 410 GFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 410 ~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+.+.||+. +..+++++++++++|.+++
T Consensus 417 -----g~~~i~~~PpL~it~~ei~~~~~~l~~~l 445 (459)
T PRK05965 417 -----GDGVLGFAPALCCTEGEFDLIFERTRKTL 445 (459)
T ss_pred -----CCcEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 34678988 4568999999999998764
No 303
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.59 E-value=1.1e-13 Score=134.13 Aligned_cols=299 Identities=20% Similarity=0.210 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHh-cCCCCEEEEeC
Q 013521 88 DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQML-LGSNVTVAVQD 165 (441)
Q Consensus 88 ~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l-~~~gd~Vlv~~ 165 (441)
++..+++.+.+.. ..+..+ ..-..++.+++++|+ + .+.++.+++++.|+.+ +..+ +++||+|+++.
T Consensus 5 ~e~~~~v~~~l~s----~~~~~~--g~~~~~fE~~~a~~~----g--~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~ 72 (363)
T PF01041_consen 5 EEEIDAVLEVLRS----GWLSTY--GPYVEEFEKEFAEYF----G--VKYAVAVSSGTSALHLALRALGLGPGDEVIVPA 72 (363)
T ss_dssp HHHHHHHHHHHHH----TCCSSS--SHHHHHHHHHHHHHH----T--SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEES
T ss_pred HHHHHHHHHHHHh----CCccCC--CHHHHHHHHHHHHHh----C--CCeEEEeCChhHHHHHHHHhcCCCcCceEecCC
Confidence 3455666666653 322222 345688999999997 4 5789999999999998 5444 57999999999
Q ss_pred CCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHH
Q 013521 166 PSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLV 240 (441)
Q Consensus 166 p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~ 240 (441)
.+|+.....+...| .++++++++++ .+..|.+. .+++++|++++. -|...+ +.+|.
T Consensus 73 ~t~~~~~~ai~~~G------------~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d---~~~i~ 133 (363)
T PF01041_consen 73 YTFPATASAILWAG------------AEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVVHL---FGNPAD---MDAIR 133 (363)
T ss_dssp SS-THHHHHHHHTT-------------EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHH
T ss_pred CcchHHHHHHHHhc------------cEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEecC---CCCccc---HHHHH
Confidence 99999999999999 69999999975 55555443 478899988654 555544 99999
Q ss_pred HHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecC--CcccCCccceeEEEEeeccccccCCchhHHHHHH
Q 013521 241 EFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSF--SKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNR 318 (441)
Q Consensus 241 ~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~--SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~ 318 (441)
++|++||++||+|.+++....-. ...+..+ . .+.+.|| +|.+. .| .-|+++++++.+ .+++..
T Consensus 134 ~~~~~~~i~lIeD~a~a~g~~~~-g~~~G~~---g--d~~~fSf~~~K~i~-~g-eGG~v~~~~~~~-------~~~~~~ 198 (363)
T PF01041_consen 134 AIARKHGIPLIEDAAQAFGARYK-GRPVGSF---G--DIAIFSFHPTKIIT-TG-EGGAVVTNDPEL-------AERARA 198 (363)
T ss_dssp HHHHHTT-EEEEE-TTTTT-EET-TEETTSS---S--SEEEEESSTTSSS--SS-S-EEEEESTHHH-------HHHHHH
T ss_pred HHHHHcCCcEEEccccccCceeC-CEeccCC---C--CceEecCCCCCCCc-CC-CCeeEEecHHHH-------HHHhhh
Confidence 99999999999999998533211 1222222 1 2677777 68885 33 349999988764 344444
Q ss_pred HHhhhc-----------------CCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeC-CCCc-
Q 013521 319 IVCTCF-----------------NGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNG-GKNA- 378 (441)
Q Consensus 319 ~~~~~~-----------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~- 378 (441)
++.... ...+.+....+... .+.++...+.-+++.+.+.+.|... ++.... +.+.
T Consensus 199 ~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~Q-----L~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~ 273 (363)
T PF01041_consen 199 LRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQ-----LKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAE 273 (363)
T ss_dssp HTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHH-----HHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTE
T ss_pred hhccCcCccccccccccccCCcccccHHHHHHHHHHH-----HHHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccc
Confidence 332221 11223322222222 3445777777778888899999887 553322 2221
Q ss_pred ---e-EEEEEcCCC---ChHHHHHHHHHhcCeEEeCCCC--cC------CC-----C---------CCeEEEEeec--CH
Q 013521 379 ---P-YVWVQFPGS---SSWDVFAEILEKTHILTIPGSG--FG------PG-----G---------NEHIRVSAFG--HR 427 (441)
Q Consensus 379 ---~-~~~~~~~~~---~~~~~~~~ll~~~gi~v~pg~~--f~------~~-----~---------~~~iRls~~~--~~ 427 (441)
+ .+.+.++.. ...++.+.|.+ .||.+.+... +. .. + ...+.|-+.. +.
T Consensus 274 ~~~~~~f~i~~~~~~~~~rd~l~~~L~~-~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~ 352 (363)
T PF01041_consen 274 RSSYYRFPIRLPDEALADRDELVEALRA-RGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTE 352 (363)
T ss_dssp EBCESSEEEEETCCGCSTHHHHHHHHHH-TTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCH
T ss_pred ccccccccccccccccchHHHHHHHHHH-CCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCH
Confidence 1 244555532 44566666554 5999988652 11 00 0 1235555432 78
Q ss_pred HHHHHHHHHHH
Q 013521 428 EYISEACRRLK 438 (441)
Q Consensus 428 ~~~~~~l~~l~ 438 (441)
++++..++.|+
T Consensus 353 edv~~I~~~ir 363 (363)
T PF01041_consen 353 EDVDYIAEAIR 363 (363)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhccC
Confidence 88888888774
No 304
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.59 E-value=1.6e-13 Score=131.22 Aligned_cols=344 Identities=17% Similarity=0.189 Sum_probs=181.8
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCC--CCCC-CcCcHHHHHHHHHHHhhhCCCCC----CcEEEcCCcH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYK--GYGA-EQGNMALRTAIADKFYKDMGIEG----DEIFISDGAQ 145 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~--~Y~~-~~g~~~lr~~ia~~l~~~~~~~~----~~I~~t~G~~ 145 (441)
..|+|--.++- .++.+.+++...+..... .++. +|.. ..-..++.+...+...+.|++++ -+|-.-+|++
T Consensus 21 ~~l~LiaSEN~--~Sp~v~~al~S~l~nkya-eg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~ 97 (399)
T PF00464_consen 21 STLNLIASENY--MSPAVREALGSDLTNKYA-EGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQ 97 (399)
T ss_dssp HSEE-CTT-------HHHHHHHTSGGGGS-T-TEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHH
T ss_pred cCccccCcccc--cCHHHHHHhCCcceeecc-ccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchH
Confidence 35787766652 457777777765543221 1111 2222 22222333333333344678883 4677788888
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC------CCCccEEE
Q 013521 146 SDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST------TSRTDIIF 219 (441)
Q Consensus 146 ~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~------~~~~~~v~ 219 (441)
..+..+.++++|||+|+..++...++...-.....+.+ .....+.+.+.++++++. ...|.++ ..+||+|+
T Consensus 98 An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~--~~~~~~~~~~~y~~d~~~-~~ID~d~l~~~a~~~kPklIi 174 (399)
T PF00464_consen 98 ANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKI--SASGLYFESVPYPVDPDT-GLIDYDELEKLAKEHKPKLII 174 (399)
T ss_dssp HHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBS--SHHHHHSEEEEEEB-TTT-SSB-HHHHHHHHHHH--SEEE
T ss_pred HHHHHHHHHHhhcCcEEecChhhccccccccccccccc--ccccceEEEEeeeeecCC-CeECHHHHHHHHhhcCCCEEE
Confidence 77777899999999999999888776432222111000 000112478888888653 3455443 36899988
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccc-cccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA-YITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 220 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~-~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
+-.-.+|- + -+.+++.++|++.|.+++.|-+|.- +...+. |.|+. . + .++.+|.+|+| +|.|-|.
T Consensus 175 ~G~S~y~~----~-~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~-~--A---Dvvt~sThKtl--~GPrggi 241 (399)
T PF00464_consen 175 CGASSYPR----P-IDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP-Y--A---DVVTGSTHKTL--RGPRGGI 241 (399)
T ss_dssp EE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC-T--S---SEEEEESSGGG---SSS-EE
T ss_pred ECchhccC----c-cCHHHHHHHHHhcCcEEEecccccccceehheecCccc-c--c---eEEEeeccccc--cccCceE
Confidence 75434432 2 2378888889999999999999874 444443 33442 2 1 28899999998 7999999
Q ss_pred EEeeccccccC------CchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCC-cHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 013521 298 TVVPEELRYSN------GYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPD-GFQALRTVIDYYKENAKIIVDAFQSLGL 370 (441)
Q Consensus 298 l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 370 (441)
+++++...... ...+.+.+.........+.+.+...++.+.--.+ .....+...++..++.+.|.+.|.+.|+
T Consensus 242 I~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~ 321 (399)
T PF00464_consen 242 ILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGF 321 (399)
T ss_dssp EEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred EEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 99982110000 0112444443322222223334444333332211 1134578888888999999999999999
Q ss_pred eeeC-CCCceEEEEEcCC-CChHHHHHHHHHhcCeEEe----CCCCcCCCCCCeEEEEee------cCHHHHHHHHHH
Q 013521 371 KVNG-GKNAPYVWVQFPG-SSSWDVFAEILEKTHILTI----PGSGFGPGGNEHIRVSAF------GHREYISEACRR 436 (441)
Q Consensus 371 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~----pg~~f~~~~~~~iRls~~------~~~~~~~~~l~~ 436 (441)
++.. ......+|+++.. ..+...+...|++.||.+. |+. =.+..+..|||+.. -.++++++..+.
T Consensus 322 ~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d-~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 322 KVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGD-RSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTT-STTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred EEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCC-CCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 8864 3456789999963 2345567788889999986 433 11223578999951 246777766554
No 305
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.59 E-value=1.8e-12 Score=137.54 Aligned_cols=341 Identities=17% Similarity=0.143 Sum_probs=203.4
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCC-----CcCcHHHHHHHHHHH
Q 013521 53 YLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGA-----EQGNMALRTAIADKF 127 (441)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l 127 (441)
....++.+.......++.. -..-++.|.++.-.|+.+.+.+.+ +. ..+..|+| .+|..+..-.+...+
T Consensus 58 ~sE~e~~~~~~~la~~N~~-~~~~ig~G~y~~~~P~vi~~~i~~---~~---~~~t~ytPyQ~EisQG~Leal~~~Qt~l 130 (954)
T PRK05367 58 LSEAEALAELRAIASKNKV-FRSYIGQGYYGTHTPPVILRNILE---NP---AWYTAYTPYQPEISQGRLEALLNFQTMV 130 (954)
T ss_pred CCHHHHHHHHHHHHhcCCC-CCcccCCCCCCCcCcHHHHHHHHh---Cc---chhhccCCCChHHHHHHHHHHHHHHHHH
Confidence 3344455554444444322 123456666665566666555544 21 22344544 345544444444444
Q ss_pred hhhCCCCCCcEEEcCCcHHHHHH-HHHh-cCC--CCEEEEeCCCchhhHhHHHHhc-cccccccccCccceeEEeecCCC
Q 013521 128 YKDMGIEGDEIFISDGAQSDISR-LQML-LGS--NVTVAVQDPSFPAYIDTSVIVG-QAGKFLKETGKYRNIVYMNCRPE 202 (441)
Q Consensus 128 ~~~~~~~~~~I~~t~G~~~al~~-l~~l-~~~--gd~Vlv~~p~y~~~~~~~~~~g-~~~~~~~~~~~~~~v~~v~~~~~ 202 (441)
.+..|.++.++.+..+++++.+. ++.+ +.+ +++|++++-.||.....++... ..| ++++.++.+.+
T Consensus 131 a~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G---------~ev~~~~~~~d 201 (954)
T PRK05367 131 ADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLG---------IEVVVGDAAKA 201 (954)
T ss_pred HHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCC---------CEEEEecCccC
Confidence 44568999999999999999986 4444 445 4899999999999876654431 122 48888887431
Q ss_pred CCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEe
Q 013521 203 NNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEIS 282 (441)
Q Consensus 203 ~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 282 (441)
+. ..++..+++.+| |-+|.+.+ +++|++.|+++|+++++|....-+..- .+..++ +-+|+++
T Consensus 202 ------~~-~~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~l---~~pge~----GaDi~vg 263 (954)
T PRK05367 202 ------LD-HDDVFGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTLL---TPPGEM----GADIAVG 263 (954)
T ss_pred ------CC-cccEEEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccCC---CChhhc----CCCEEEe
Confidence 11 134555666676 55999987 999999999999999998754322211 122222 3459999
Q ss_pred cCCcc-----cCCccceeEEEEeeccccccCCchhHH--------------------HHHHHHhhhcCCCcHHHHHHHHH
Q 013521 283 SFSKF-----AGFTGVRLGWTVVPEELRYSNGYPVIK--------------------DFNRIVCTCFNGASNIVQAGGLA 337 (441)
Q Consensus 283 S~SK~-----~~~~G~r~G~l~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~a~~~ 337 (441)
|..|+ +|-| ..|++.+++++...--..++. .+++.+.....++ .-...++.+
T Consensus 264 s~qkfg~P~g~GGP--~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict-~qaL~a~~a 340 (954)
T PRK05367 264 SAQRFGVPMGFGGP--HAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICT-AQVLLAVMA 340 (954)
T ss_pred eCcccCCCCCCCCC--CEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccch-HHHHHHHHH
Confidence 99998 5544 499999988764221000000 0111111111111 111111221
Q ss_pred hc--CCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCC
Q 013521 338 CL--SPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGG 415 (441)
Q Consensus 338 ~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~ 415 (441)
.+ .-.+...+++..++...+..++.+.|++.|+++..+.-..-+.++++ .+..++.++++++ ||.+..- .
T Consensus 341 ~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~~-~~~~~i~~~l~~~-gi~~~~~------~ 412 (954)
T PRK05367 341 SMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEVG-GDAAAVLARALAA-GINLRRV------D 412 (954)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeCC-CCHHHHHHHHHHC-Cceeccc------c
Confidence 11 11122456788888889999999999887877654321122445554 3566777777655 9988331 2
Q ss_pred CCeEEEEe--ecCHHHHHHHHHHHH
Q 013521 416 NEHIRVSA--FGHREYISEACRRLK 438 (441)
Q Consensus 416 ~~~iRls~--~~~~~~~~~~l~~l~ 438 (441)
++.+|+|+ .+++++++.+++.|.
T Consensus 413 ~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 413 DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred CCEEEEEecccCCHHHHHHHHHHHc
Confidence 45799997 568999999999986
No 306
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.59 E-value=5e-13 Score=131.56 Aligned_cols=339 Identities=11% Similarity=0.071 Sum_probs=184.3
Q ss_pred CCCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcH
Q 013521 69 HPDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQ 145 (441)
Q Consensus 69 ~~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~ 145 (441)
..++.+||+..|.. .+ ..+|.+.+++.+.+.... ...+ +. +.+..+|+.+....+...+.+.++++++
T Consensus 50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~----~~~~-~~----~~~~~la~~L~~~~~~~~~~v~f~~SGs 120 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT----SYGL-TS----EQEILFAEELFSYLGLEDHKIRFVSSGT 120 (433)
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC----CCCC-CC----HHHHHHHHHHHHhCCCCcCEEEEeCchH
Confidence 34667889876642 22 367999999999887521 1122 22 2334445544432333336899999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEeCCCchhhHhH---HHHhcccccccc-c----cCccceeEEeecCCCCCccCCCCC-CC
Q 013521 146 SDISR-L--QMLLGSNVTVAVQDPSFPAYIDT---SVIVGQAGKFLK-E----TGKYRNIVYMNCRPENNFFPDLST-TS 213 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~-~----~~~~~~v~~v~~~~~~~~~~~~~~-~~ 213 (441)
+|+.. + .........|+...-+|++.... ....+....... . .........++.++...+...+.. .+
T Consensus 121 EA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 200 (433)
T PRK00615 121 EATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGH 200 (433)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCC
Confidence 99886 3 22233346788888899986422 111110000000 0 000001111111100000000111 13
Q ss_pred CccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCc
Q 013521 214 RTDIIFFCSP-NNPTGHAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFT 291 (441)
Q Consensus 214 ~~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~ 291 (441)
++.+| |..| +.-.|... +++.+++|.++|++||+++|.||++..+ ..+.......+.-.+| |+ +|+|.+| .
T Consensus 201 ~~aav-I~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PD--i~--~~gK~lg-g 273 (433)
T PRK00615 201 RVAGV-IFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPD--IT--VYGKILG-G 273 (433)
T ss_pred ceEEE-EECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCC--eE--EEccccc-C
Confidence 44554 4556 55567655 5789999999999999999999999766 2221111111222344 32 4899998 7
Q ss_pred cceeEEEEeeccccccCCchhHHHHHH---HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH----HH
Q 013521 292 GVRLGWTVVPEELRYSNGYPVIKDFNR---IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIV----DA 364 (441)
Q Consensus 292 G~r~G~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~----~~ 364 (441)
|+.+|++++++++. +.+.. .....+.+.+++...++.+.|+.-.. +...++.+++-+++. +.
T Consensus 274 G~p~~av~~~~~i~--------~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~---~~~~~~~~~~g~~l~~~l~~~ 342 (433)
T PRK00615 274 GLPAAAVVAHKSIM--------DHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE---QGFYTQLSTLEQNFLSPIEEM 342 (433)
T ss_pred CcceeeeeecHHHH--------hhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHH
Confidence 88899999988873 33321 11122333577777777777762111 223444444444444 44
Q ss_pred HHhCCCeeeCCCCceEEEEEcCCC-----------C---hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHH
Q 013521 365 FQSLGLKVNGGKNAPYVWVQFPGS-----------S---SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYI 430 (441)
Q Consensus 365 L~~~g~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~ 430 (441)
+.+.|+.+.....|.++.+.+... + ...+...+++ +||.+.|... . ... ++...+++++
T Consensus 343 ~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~-~---~~~--ls~~ht~~di 415 (433)
T PRK00615 343 IRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS-KGVYLSPSPF-E---ASF--LSSAHSMENL 415 (433)
T ss_pred HHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH-CCeeecCccc-c---ccc--eecCCCHHHH
Confidence 444454332112455666666311 0 1235555555 5999987542 1 112 4666799999
Q ss_pred HHHHHHHHhhC
Q 013521 431 SEACRRLKNFL 441 (441)
Q Consensus 431 ~~~l~~l~~~l 441 (441)
+++++++.+++
T Consensus 416 d~~~~a~~~~~ 426 (433)
T PRK00615 416 DYAQNVLIDSL 426 (433)
T ss_pred HHHHHHHHHHH
Confidence 99999998763
No 307
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1.5e-12 Score=129.46 Aligned_cols=338 Identities=12% Similarity=0.060 Sum_probs=191.5
Q ss_pred CCCCeEEeCCC-CCCCC-CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 70 PDARLIRLGIG-DTTQP-IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 70 ~~~~~i~l~~g-~~~~~-~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
.++.++|+..+ ...+. .+|.+.+++.+.+.+... ....| .. +.+..+++.+.+..+-..+.+++++++++|
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~-~~----~~~~~lae~L~~~~p~~~~~v~f~~sGseA 142 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPF--SPRRF-TN----ETAIECAEKLTEIAGGELNRVLFAPGGTSA 142 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCC--ccCcc-CC----HHHHHHHHHHHHhCCCCCCEEEECCCcHHH
Confidence 35678887632 12232 678999999999876431 11123 22 344445555543233334799999999999
Q ss_pred HHHHHHh---cCCCCEEEEeCCCchhhHhHHH-Hhcccc---ccccccCccceeEEeecCCCCC--cc----------CC
Q 013521 148 ISRLQML---LGSNVTVAVQDPSFPAYIDTSV-IVGQAG---KFLKETGKYRNIVYMNCRPENN--FF----------PD 208 (441)
Q Consensus 148 l~~l~~l---~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~---~~~~~~~~~~~v~~v~~~~~~~--~~----------~~ 208 (441)
+.....+ .....+|+....+|++....+. ..+... .+.+.. ..+..++...... +. ..
T Consensus 143 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (459)
T PRK06082 143 IGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLM---AGVERIPPAVSYRGAFPDADGSDVHYADY 219 (459)
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCC---CCCEEeCCCcccccccCChhHHHHHHHHH
Confidence 9863322 2344788888899988643332 222110 000000 1122232111000 00 00
Q ss_pred CC----CCCCccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEec
Q 013521 209 LS----TTSRTDIIFFCSP-NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283 (441)
Q Consensus 209 ~~----~~~~~~~v~i~~p-~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S 283 (441)
++ ..+++.+|+ ..| ++..+...|++.+++|.++|++||+++|.||++..|...+.......+.-.|| |+ +
T Consensus 220 l~~~i~~~~~vAavI-vEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PD--iv--~ 294 (459)
T PRK06082 220 LEYVIEKEGGIGAFI-AEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPD--IL--C 294 (459)
T ss_pred HHHHHhcCCCEEEEE-ECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCC--EE--E
Confidence 11 113454544 466 55445567889999999999999999999999987644332211122222345 33 3
Q ss_pred CCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Q 013521 284 FSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIV 362 (441)
Q Consensus 284 ~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 362 (441)
++|.+| .| +.+|.+++++++. ..+.......+.+.++++..++.+.++.-.. +.+.++.+++-+++.
T Consensus 295 ~gKgl~-gG~~P~~av~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~ 362 (459)
T PRK06082 295 IGKGLG-GGLVPIAAMITKDKYN--------TAAQISLGHYTHEKSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMR 362 (459)
T ss_pred eccccc-CCCCcceEEEEcHHHH--------hhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHH
Confidence 899998 77 5899999887752 1111000112445678888878777762111 234555666666666
Q ss_pred HHHHhC----CCeeeCCCCceEEEEEcCCC-----C----hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCH
Q 013521 363 DAFQSL----GLKVNGGKNAPYVWVQFPGS-----S----SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHR 427 (441)
Q Consensus 363 ~~L~~~----g~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~ 427 (441)
+.|+++ ++......-|.++-+++... . ...+...++ ++||.+.+. +.+.+|++ +..++
T Consensus 363 ~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~------~~~~i~~~Ppl~it~ 435 (459)
T PRK06082 363 ERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCL-NNGLSFKVS------QGNVIQLSPPLIITR 435 (459)
T ss_pred HHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHH-hCCCEEEec------CCCEEEEeCCCccCH
Confidence 666543 32211112466666666311 0 123444555 459998763 23679998 45689
Q ss_pred HHHHHHHHHHHhhC
Q 013521 428 EYISEACRRLKNFL 441 (441)
Q Consensus 428 ~~~~~~l~~l~~~l 441 (441)
++++++++++.+++
T Consensus 436 ~eid~~~~~l~~~l 449 (459)
T PRK06082 436 EELTQALAILEEAI 449 (459)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 308
>PRK07482 hypothetical protein; Provisional
Probab=99.58 E-value=1.6e-12 Score=129.42 Aligned_cols=341 Identities=12% Similarity=0.042 Sum_probs=193.6
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|-. .+ ..+|.+.+++.+.+.+.........+ ..+.+..+|+.+.+..+-..+.+++++++++
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~-----~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSE 122 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGH-----GTEASITLSKRIIDRAPAGMSKVYYGLSGSD 122 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCcccccccc-----CCHHHHHHHHHHHHhCCCCcCEEEEeCchHH
Confidence 4567888877743 22 36789999999998763210111122 1344455555554433333578999999999
Q ss_pred HHHH-HH--Hhc----C-C-CCEEEEeCCCchhhHhHHHHhcccc----ccccccCccceeEEeecCCCCC---------
Q 013521 147 DISR-LQ--MLL----G-S-NVTVAVQDPSFPAYIDTSVIVGQAG----KFLKETGKYRNIVYMNCRPENN--------- 204 (441)
Q Consensus 147 al~~-l~--~l~----~-~-gd~Vlv~~p~y~~~~~~~~~~g~~~----~~~~~~~~~~~v~~v~~~~~~~--------- 204 (441)
|+.. +. ... . + ..+|+....+|++....+....... .+.+.. ..+..++......
T Consensus 123 Ave~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~ 199 (461)
T PRK07482 123 ANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPI---ARVLHTEAPHYYRRADAGMSEE 199 (461)
T ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCC---CCCEEcCCCccccccccCCCHH
Confidence 9986 42 111 1 2 3578889999999643322222110 000000 1122222211000
Q ss_pred -c----cCCCC----C--CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc
Q 013521 205 -F----FPDLS----T--TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI 271 (441)
Q Consensus 205 -~----~~~~~----~--~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~ 271 (441)
+ ...++ . .+++.+|+ ..| +.-.|.+ .|++.+++|.++|++||+++|.||+...|...+.......+
T Consensus 200 ~~~~~~~~~l~~~~~~~~~~~iAAvi-~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~ 278 (461)
T PRK07482 200 QFSAYCADELEELILAEGPDTIAAFI-AEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHY 278 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhc
Confidence 0 00011 1 13455555 466 5555766 57889999999999999999999999877544432222223
Q ss_pred CCCcceeEEEecCCcccCCccc-eeEEEEeeccccccCCchhHHHHHH-------HHhhhcCCCcHHHHHHHHHhcCCCc
Q 013521 272 PGAREVAIEISSFSKFAGFTGV-RLGWTVVPEELRYSNGYPVIKDFNR-------IVCTCFNGASNIVQAGGLACLSPDG 343 (441)
Q Consensus 272 ~~~~~~~i~i~S~SK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~ 343 (441)
.-.|| ++ +++|.++ .|. .+|.+++.+++. +.+.. .....+.+.++++..++.+.|+.-.
T Consensus 279 gv~PD--iv--~~gKgl~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~ 345 (461)
T PRK07482 279 GIEPD--LI--TVAKGLT-SAYAPLSGSIVGEKVW--------DVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILE 345 (461)
T ss_pred CCCCC--EE--EEccccc-cCccccceeeecHHHH--------HHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHH
Confidence 22355 33 3799998 785 899988887762 33321 1122344578888888888876211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----CCCeeeCCCCceEEEEEcCC-C------C-----hHHHHHHHHHhcCeEEeC
Q 013521 344 FQALRTVIDYYKENAKIIVDAFQS----LGLKVNGGKNAPYVWVQFPG-S------S-----SWDVFAEILEKTHILTIP 407 (441)
Q Consensus 344 ~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~-~------~-----~~~~~~~ll~~~gi~v~p 407 (441)
. +...+..++.-+++.+.|++ +++.......|.++-+++.. . + ...+...+++ +||.+.+
T Consensus 346 ~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~ 421 (461)
T PRK07482 346 R---ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALE-RGVIARA 421 (461)
T ss_pred h---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHH-CCcEEec
Confidence 1 22334445555555555543 33322111246666666631 1 0 1234555554 5999865
Q ss_pred CCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 408 GSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 408 g~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+. ..+.+|+. +..+++++++++++|.+++
T Consensus 422 ~~-----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l 452 (461)
T PRK07482 422 MP-----HGDILGFAPPLVLTRAEADEIVAIAKDAV 452 (461)
T ss_pred CC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 31 13578887 5679999999999998764
No 309
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.58 E-value=8.7e-13 Score=130.85 Aligned_cols=337 Identities=12% Similarity=0.074 Sum_probs=194.8
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|- ..+ ..+|.+.+++.+.+.+... .....+ .. +.+..+|+.+.+..+..-+.+++++++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~-~~----~~~~~lAe~L~~~~p~~~~~v~f~~sGse 125 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEH-AMLAGC-TH----EPAIELAERLAALTGGTLGHAFFASDGAS 125 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCC-cccccc-CC----HHHHHHHHHHHHhCCCCCCEEEEeCCCHH
Confidence 456788887663 222 3678999999998876421 111122 12 34445555554323333368999999999
Q ss_pred HHHH-HHHh---c----C-CCCEEEEeCCCchhhHhHHHHhccccc----cccccCccceeEEeecCCCCCcc-------
Q 013521 147 DISR-LQML---L----G-SNVTVAVQDPSFPAYIDTSVIVGQAGK----FLKETGKYRNIVYMNCRPENNFF------- 206 (441)
Q Consensus 147 al~~-l~~l---~----~-~gd~Vlv~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~v~~v~~~~~~~~~------- 206 (441)
|+.. +... . . ...+|+....+|++....+........ +.+.. ..+..++........
T Consensus 126 Ave~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~ 202 (453)
T PRK06943 126 AVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLI---RHAHVVASPDARGARPGETAAD 202 (453)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCC---CCCEEECCCCccccccCCCHHH
Confidence 9886 4221 1 1 236799999999986533322221100 00000 012223221110000
Q ss_pred ------CCCC----C-CCCccEEEEcCC--CCcccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccC
Q 013521 207 ------PDLS----T-TSRTDIIFFCSP--NNPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIP 272 (441)
Q Consensus 207 ------~~~~----~-~~~~~~v~i~~p--~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~ 272 (441)
.+++ . .+++.+|++ .| +.-.|. ..|.+.++++.++|++||+++|.||+...|...+.......+.
T Consensus 203 ~~~~~~~~l~~~l~~~~~~iAAvii-EPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~g 281 (453)
T PRK06943 203 VAARALADVRRLFAERAGKIAALIV-EPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAG 281 (453)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEE-eccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCC
Confidence 0111 1 245666554 55 566676 4689999999999999999999999998775443322222232
Q ss_pred CCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH------HHhhhcCCCcHHHHHHHHHhcCCCcHH
Q 013521 273 GAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR------IVCTCFNGASNIVQAGGLACLSPDGFQ 345 (441)
Q Consensus 273 ~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~ 345 (441)
-.|| +-+++|.++ .| +.+|.+++++++. +.+.. .....+++.++++..++.+.|+--..
T Consensus 282 v~PD----ivt~gKgl~-gG~~Pi~av~~~~ei~--------~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~- 347 (453)
T PRK06943 282 VWPD----FLCLSKGIS-GGYLPLSLVLSRDAIF--------AAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE- 347 (453)
T ss_pred CCCC----eEeeehhhc-cCcccceEEEEcHHHH--------HhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh-
Confidence 2355 334799998 88 5999999988873 33321 11223444678888888888762111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCceEEEEEcC-CCC-----hHHHHHHHHHhcCeEEeCCCCcCCCC
Q 013521 346 ALRTVIDYYKENAKIIVDAFQSL----GLKVNGGKNAPYVWVQFP-GSS-----SWDVFAEILEKTHILTIPGSGFGPGG 415 (441)
Q Consensus 346 ~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~ll~~~gi~v~pg~~f~~~~ 415 (441)
+++.++.++.-+++.+.|+++ ++.-.. ..|.++-+++. +.+ ...+...++ ++||.+.+. +
T Consensus 348 --~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~gvel~~~~~~~~~~~~~i~~~~~-~~Gll~~~~------g 417 (453)
T PRK06943 348 --DDVLARNARKSARLRAALAPLAAHPQVRHLR-QRGTIFAFDVALDGDAARTFSRRFFEAAL-ERELLLRPI------G 417 (453)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccccEEEEEEccCCCcchHHHHHHHHHHH-HCCcEEEec------C
Confidence 233444555555565665543 232222 24666666664 211 123445555 459999763 1
Q ss_pred CCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 416 NEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 416 ~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+.+||+ +..+++++++++++|.++|
T Consensus 418 -~~l~~~Ppl~it~~eid~~~~~l~~al 444 (453)
T PRK06943 418 -TTVYLMPPYVLDDDEIAWLAERTRATL 444 (453)
T ss_pred -CEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 358998 6779999999999998764
No 310
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.58 E-value=1.8e-12 Score=128.35 Aligned_cols=337 Identities=18% Similarity=0.204 Sum_probs=192.2
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|- ..+ ..+|.+.+++.+.+.++.... ...+. .+....+|+.|.+..+...+.+++++++++
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~-~~~~~-----~~~~~~la~~L~~~~p~~~~~v~f~~sGse 120 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAP-AFQMG-----HPLAFELAERLAELAPGGLDHVFFTNSGSE 120 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCcc-ccccC-----CHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 356788887663 222 367889999999887643111 11221 223344555554322323468999999999
Q ss_pred HHHH-HH--Hhc----C-C-CCEEEEeCCCchhhHhHHHHhcc-cc---ccccccCccceeEEeecCC---CCCcc----
Q 013521 147 DISR-LQ--MLL----G-S-NVTVAVQDPSFPAYIDTSVIVGQ-AG---KFLKETGKYRNIVYMNCRP---ENNFF---- 206 (441)
Q Consensus 147 al~~-l~--~l~----~-~-gd~Vlv~~p~y~~~~~~~~~~g~-~~---~~~~~~~~~~~v~~v~~~~---~~~~~---- 206 (441)
|+.. +. ... + + ..+|+....+|++....+..... .. .+.+.. ..+..++... ...+.
T Consensus 121 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
T PRK09221 121 SVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLL---PGVDHLPHTLDLPENAFSKGQP 197 (445)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCC---CCCeEeCCCccccccccCCChH
Confidence 9886 42 222 1 1 35789899999986433322211 00 000000 1222333211 00000
Q ss_pred -------CCCCC------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccccc
Q 013521 207 -------PDLST------TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEI 271 (441)
Q Consensus 207 -------~~~~~------~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~ 271 (441)
.++++ ..++.+|+ ..| +...|.. .+.+.+++|.++|++||+++|.||++..|...+.......+
T Consensus 198 ~~~~~~~~~l~~~i~~~~~~~iAavi-~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~ 276 (445)
T PRK09221 198 EHGAELADDLERLVALHDASTIAAVI-VEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERF 276 (445)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEE-EecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhc
Confidence 01111 13455555 455 6667775 57888999999999999999999999765433322222222
Q ss_pred CCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH-------HHhhhcCCCcHHHHHHHHHhcCCCc
Q 013521 272 PGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR-------IVCTCFNGASNIVQAGGLACLSPDG 343 (441)
Q Consensus 272 ~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~ 343 (441)
.-.|| +-+++|.++ .| +.+|.+++++++. +.+.. .....+.+.++++..++.+.|+.-.
T Consensus 277 gv~PD----i~~~gK~l~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~ 343 (445)
T PRK09221 277 GVTPD----IITFAKGLT-NGAIPMGAVIASDEIY--------DAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYR 343 (445)
T ss_pred CCCCC----EEEeccccc-cCcccceeeEEcHHHH--------HhhccCcccccccccccCCCcCHHHHHHHHHHHHHHH
Confidence 22344 347999997 66 6799999887763 22221 1112234467777777777775211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCee---eCCCCceEEEEEcCC--C----ChHHHHHHHHHhcCeEEeCCCCcCC
Q 013521 344 FQALRTVIDYYKENAKIIVDAFQSL-GLKV---NGGKNAPYVWVQFPG--S----SSWDVFAEILEKTHILTIPGSGFGP 413 (441)
Q Consensus 344 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~~--~----~~~~~~~~ll~~~gi~v~pg~~f~~ 413 (441)
. +.+.++.++..+++.+.|+++ +... .. .-|...-+.+.. . ....+.+.+++ +||.+.++
T Consensus 344 ~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vr-g~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~----- 413 (445)
T PRK09221 344 E---EDLFERAAELAPYFEDAVHSLKGLPHVIDIR-NIGLVAGIELAPRPGAPGARGYEAFMKCFE-KGLLVRYT----- 413 (445)
T ss_pred h---ccHHHHHHHHHHHHHHHHHhhccCCCEEEEe-cCceEEEEEEecccccccchHHHHHHHHHH-CCeEEeec-----
Confidence 1 234566667777777777664 2111 11 134455555531 1 12345566554 59999763
Q ss_pred CCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 414 GGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 414 ~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.+.+||+ +..+++++++++++|.+++
T Consensus 414 --~~~lr~~Ppl~~t~~eid~~~~~l~~~l 441 (445)
T PRK09221 414 --GDTIALSPPLIIEKAQIDELVDALGDAL 441 (445)
T ss_pred --CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 2479999 5668999999999998764
No 311
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.57 E-value=2.3e-12 Score=129.08 Aligned_cols=339 Identities=13% Similarity=0.103 Sum_probs=191.3
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhC-CCCCCcEEEcCCcH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDM-GIEGDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~-~~~~~~I~~t~G~~ 145 (441)
.++.++|+..|- ..+ ..+|.+.+++.+.+.+........ .+..+....+|+.|.+.+ +.+.+.++++++++
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~-----~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGs 161 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFW-----NRTTKPSLDLAKELLEMFTARKMGKVFFTNSGS 161 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceeccc-----ccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChH
Confidence 467889988763 222 467899999999987642111111 122344555666554322 22345789999999
Q ss_pred HHHHH-HHHhc------C-C-CCEEEEeCCCchhhHhHHHH-hcccc---ccccccCccceeEEeecCC-------CCC-
Q 013521 146 SDISR-LQMLL------G-S-NVTVAVQDPSFPAYIDTSVI-VGQAG---KFLKETGKYRNIVYMNCRP-------ENN- 204 (441)
Q Consensus 146 ~al~~-l~~l~------~-~-gd~Vlv~~p~y~~~~~~~~~-~g~~~---~~~~~~~~~~~v~~v~~~~-------~~~- 204 (441)
+|... +.... . + ...|+..+-+|++....... .|... .+.+.. ..+..++... ...
T Consensus 162 EA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~ 238 (504)
T PLN02760 162 EANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPA---PFVLHTDCPHYWRFHLPGETE 238 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCC---CCcEEeCCCcccccCCCCCcH
Confidence 99886 42221 1 2 25788889899886432222 22110 000000 0122222110 000
Q ss_pred --c----cCCCC-----C-CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccc
Q 013521 205 --F----FPDLS-----T-TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYE 270 (441)
Q Consensus 205 --~----~~~~~-----~-~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~ 270 (441)
+ ..+++ . ..++.+| |..| +.-.|.+ .|.+.+++|.++|++||+++|.||++..|...+.......
T Consensus 239 ~~~~~~~~~~le~~l~~~~~~~iAAv-I~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~ 317 (504)
T PLN02760 239 EEFSTRLADNLENLILKEGPETIAAF-IAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDK 317 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHh
Confidence 0 00111 1 1234454 4566 5556765 5789999999999999999999999976644332211112
Q ss_pred cCCCcceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH-------HHhhhcCCCcHHHHHHHHHhcCCC
Q 013521 271 IPGAREVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR-------IVCTCFNGASNIVQAGGLACLSPD 342 (441)
Q Consensus 271 ~~~~~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~ 342 (441)
+.-.|| +.+|+|.+| .| +.+|.+++++++. +.+.. .....+++.++++..++.+.|+.-
T Consensus 318 ~gv~PD----ivtlgK~lg-gG~~PigAv~~~~~i~--------d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i 384 (504)
T PLN02760 318 YNIKPD----LVSLAKALS-SAYMPIGAVLVSPEIS--------DVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIY 384 (504)
T ss_pred cCCCCc----EEEeccccc-CCccccceEeecHHHH--------hhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHH
Confidence 222344 567999997 66 4899999988773 33321 112233446788888888888621
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhC---CCeeeCCCCceEEEEEcCC-CC-----------hHHHHHHHHHhcCeEEeC
Q 013521 343 GFQALRTVIDYYKENAKIIVDAFQSL---GLKVNGGKNAPYVWVQFPG-SS-----------SWDVFAEILEKTHILTIP 407 (441)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~ll~~~gi~v~p 407 (441)
.. +...++.+++.+.+.+.|+++ ++....-.-|.++-+++.. .. ...+...++ ++||.+.+
T Consensus 385 ~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~ 460 (504)
T PLN02760 385 KE---RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECK-KRGMLVRV 460 (504)
T ss_pred Hh---CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHH-hCCcEEEe
Confidence 11 234555555556666655543 3211111245666666631 11 122444544 45999976
Q ss_pred CCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 408 GSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 408 g~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
. .+.+|++ +..+++++++++++|.+++
T Consensus 461 ~-------g~~lrl~Ppl~it~eeid~~~~~l~~al 489 (504)
T PLN02760 461 A-------GDNIMMSPPLIITPEEVDELISIYGKAL 489 (504)
T ss_pred c-------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 3 1468999 5579999999999998764
No 312
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.57 E-value=1.5e-12 Score=128.78 Aligned_cols=335 Identities=13% Similarity=0.132 Sum_probs=188.4
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|.. .+ ..+|.+.+++.+.+.+.. ...+ +. +.+..+|+.+....+ ..+.+.+++++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~----~~~~-~~----~~~~~la~~l~~~~p-~~~~v~f~~sGse 120 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGV----LYGT-PT----ELEIEFAKMLKEAIP-SLEKVRFVNSGTE 120 (428)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC----ccCC-CC----HHHHHHHHHHHHhCC-CCcEEEEeCCHHH
Confidence 4567888876642 22 367889999999887521 1122 22 233445554433223 3479999999999
Q ss_pred HHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHhccccccc---cc--c---CccceeEEeecCCCCCccCCCCC-CCC
Q 013521 147 DISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFL---KE--T---GKYRNIVYMNCRPENNFFPDLST-TSR 214 (441)
Q Consensus 147 al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~---~~--~---~~~~~v~~v~~~~~~~~~~~~~~-~~~ 214 (441)
|... + .........|+...-+|++....+.......... +. . ....++..++..+...+...++. ..+
T Consensus 121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE 200 (428)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence 9886 4 2223345688888999999754443322110000 00 0 00012223332211000000111 134
Q ss_pred ccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcc
Q 013521 215 TDIIFFCSP-NNPTGHAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTG 292 (441)
Q Consensus 215 ~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G 292 (441)
+.+|+ ..| +.-.|.+. |.+.+++|.++|++||+++|.||++..| ..+.......+.-.+| +-+++|.+| .|
T Consensus 201 vaavi-~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PD----ivt~gK~lg-gG 273 (428)
T PRK12389 201 VAAVL-VEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPD----LTALGKIIG-GG 273 (428)
T ss_pred EEEEE-EeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCC----eeeechhhc-CC
Confidence 55544 455 66678654 6889999999999999999999999876 2211111111222344 347899998 88
Q ss_pred ceeEEEEeeccccccCCchhHHHHHH---HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHh--
Q 013521 293 VRLGWTVVPEELRYSNGYPVIKDFNR---IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQS-- 367 (441)
Q Consensus 293 ~r~G~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-- 367 (441)
+.+|.+++++++. +.+.. .....+++.++++..++.+.|+.-.. +...++.++.-+++.+.|++
T Consensus 274 ~Pi~av~~~~~i~--------~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~ 342 (428)
T PRK12389 274 LPIGAYGGRKDIM--------EQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ---EGVYEKLDRLGAMLEEGILEAA 342 (428)
T ss_pred CceeEEeEHHHHH--------hhhccCCCcccccCCccCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887763 33321 11223344678888888887762111 22444555555566555554
Q ss_pred --CCC--eeeCCCCceEEEEEcC--CC---------C---hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHH
Q 013521 368 --LGL--KVNGGKNAPYVWVQFP--GS---------S---SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREY 429 (441)
Q Consensus 368 --~g~--~~~~~~~~~~~~~~~~--~~---------~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~ 429 (441)
+++ .+... .|++ -+.+. .. + ...+...++ ++||.+.|.. .+.+.+++..++++
T Consensus 343 ~~~~~~~~v~r~-~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~l~~t~e~ 413 (428)
T PRK12389 343 EKHGITITINRL-KGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLML-NQGINLAPSK------YEAWFLTTAHTEED 413 (428)
T ss_pred HhCCCCEEEEec-CcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHH-HCCcEeecCC------CCCeeecCCCCHHH
Confidence 343 22222 3432 23332 10 1 123445544 4699998742 12356777779999
Q ss_pred HHHHHHHHHhhC
Q 013521 430 ISEACRRLKNFL 441 (441)
Q Consensus 430 ~~~~l~~l~~~l 441 (441)
+++++++|.+++
T Consensus 414 id~~~~~l~~~l 425 (428)
T PRK12389 414 IEETLEAVDRAF 425 (428)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 313
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=6.7e-13 Score=130.74 Aligned_cols=338 Identities=11% Similarity=0.068 Sum_probs=193.4
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|- ..+ ..+|.+.+++.+.+.+... .....| ......+|.+.+++. .+...+.+++++++++
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~-~~~~~~~lae~L~~~----~p~~~~~v~f~~sGse 115 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSH-IMFGGF-THEPAVELAQKLLEI----LPPSLNKIFFADSGSV 115 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCC-cccccc-CCHHHHHHHHHHHhh----CCCCcCEEEEeCCchH
Confidence 456788886653 222 3578999999998876421 011112 222334444444443 2333469999999999
Q ss_pred HHHH-HH--Hhc-----CC-CCEEEEeCCCchhhHhHHHHh-cc----ccccccccCccceeEEeecCCCC---Ccc---
Q 013521 147 DISR-LQ--MLL-----GS-NVTVAVQDPSFPAYIDTSVIV-GQ----AGKFLKETGKYRNIVYMNCRPEN---NFF--- 206 (441)
Q Consensus 147 al~~-l~--~l~-----~~-gd~Vlv~~p~y~~~~~~~~~~-g~----~~~~~~~~~~~~~v~~v~~~~~~---~~~--- 206 (441)
|+.. +. ... ++ ..+|+....+|++........ +. ++.+.+.. ..+..+|..... .+.
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~ 192 (429)
T PRK06173 116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSL---PVQYFLPQPSIKFGEEWNDEA 192 (429)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccC---CCCeEeCCCCcccchhHHHHH
Confidence 9886 42 222 13 357888999999853222211 21 11111000 112233321100 000
Q ss_pred C-----CCCC-CCCccEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcce
Q 013521 207 P-----DLST-TSRTDIIFFCSP--NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREV 277 (441)
Q Consensus 207 ~-----~~~~-~~~~~~v~i~~p--~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~ 277 (441)
. .++. .+++.+|++ .| +.-.|.. .|++.+++|.++|++||+++|.||++..|...+.......+.-.+|
T Consensus 193 l~~l~~~i~~~~~~iAAvi~-EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD- 270 (429)
T PRK06173 193 IEPLQDLLEQKGDEIAALIL-EPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD- 270 (429)
T ss_pred HHHHHHHHHhCCCcEEEEEE-cchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCC-
Confidence 0 0111 245666554 55 6666765 7899999999999999999999999976533332211222222344
Q ss_pred eEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH-----HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHH
Q 013521 278 AIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR-----IVCTCFNGASNIVQAGGLACLSPDGFQALRTVI 351 (441)
Q Consensus 278 ~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 351 (441)
|+ +|+|.++ .| +.++.+++++++. +.+.. .....+...++++..++.+.|+.-.. +..+
T Consensus 271 -iv--~~gK~l~-gG~~p~~a~~~~~~i~--------~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~---~~~~ 335 (429)
T PRK06173 271 -IM--CIGKALT-GGYLTLSATITTEAIA--------QTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE---SPWQ 335 (429)
T ss_pred -EE--Eeehhhh-CCccccceEEecHHHH--------HHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHH
Confidence 33 3999997 77 4788888877662 33321 11222334677887777777752111 2345
Q ss_pred HHHHHHHHHHHHHHHhC-CCeeeCC--CCceEEEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eec
Q 013521 352 DYYKENAKIIVDAFQSL-GLKVNGG--KNAPYVWVQFPGS-SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFG 425 (441)
Q Consensus 352 ~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~ 425 (441)
++.+++-+.+.+.|++. +...... ..|+.+-+.+... ....+...++ ++||.+.+. + +.|||. +..
T Consensus 336 ~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~-e~Gi~v~~~------g-~~l~~~Ppl~i 407 (429)
T PRK06173 336 QNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATLQPRFV-EHGIWVRPF------G-KLVYIMPPFII 407 (429)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcccHHHHHHHHH-HCCeEEEec------C-CEEEEeCCccC
Confidence 66666777777777654 3322111 2467777777532 2345555555 459999763 1 479998 566
Q ss_pred CHHHHHHHHHHHHhhC
Q 013521 426 HREYISEACRRLKNFL 441 (441)
Q Consensus 426 ~~~~~~~~l~~l~~~l 441 (441)
+++++++++++|.+++
T Consensus 408 t~~ei~~~~~~l~~~l 423 (429)
T PRK06173 408 SPDELSQLTSGLLRVL 423 (429)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8999999999998864
No 314
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.57 E-value=4.2e-12 Score=120.64 Aligned_cols=327 Identities=13% Similarity=0.128 Sum_probs=197.6
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHhhccC-CCC---CCCCCCCcCcHHHHHHHHHHHhhhCCCCC-CcEEEcCC-cHHH
Q 013521 74 LIRLGIGDTTQPIPDIITSAMAEHAFALST-VKG---YKGYGAEQGNMALRTAIADKFYKDMGIEG-DEIFISDG-AQSD 147 (441)
Q Consensus 74 ~i~l~~g~~~~~~~~~~~~al~~~~~~~~~-~~~---~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~I~~t~G-~~~a 147 (441)
.++|+-|. -..|++|++++++.+.++.. .-+ +.+++ +-..++-+.+-+.|++.++++. .+|++.+| ++.+
T Consensus 5 ~~nF~aGP--a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs--~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~ 80 (364)
T PRK12462 5 QLNFSGGP--GALPDTVLEQVRQAVVELPETGLSVLGMSHRS--SWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQ 80 (364)
T ss_pred cceecCCC--cCCCHHHHHHHHHHHhcccccCcccccccccc--HHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHH
Confidence 56777774 34688999999988876532 011 23332 3345555555555666667743 36665555 7888
Q ss_pred HHH-HHHhcCCCCEEE-EeCCCchhh--HhHHHHhccccccccccCccceeEEeecCCCCCc--cCC---CCCCCCccEE
Q 013521 148 ISR-LQMLLGSNVTVA-VQDPSFPAY--IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF--FPD---LSTTSRTDII 218 (441)
Q Consensus 148 l~~-l~~l~~~gd~Vl-v~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~--~~~---~~~~~~~~~v 218 (441)
++. ++.++.+||+++ +..-++++- ...++.+| ++..+......++ .++ +...++.+.|
T Consensus 81 ~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-------------~v~~~~~~~~~~~~~~p~~~~~~~~~d~~~v 147 (364)
T PRK12462 81 FSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-------------AMRVVWDGAASGYRTLPSLAELDWDARAPFR 147 (364)
T ss_pred HHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-------------CceEecCcCCCCCCcCCCHHHhccCCCCcEE
Confidence 887 688999999665 555666663 33333344 2222221111111 222 2223467888
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWT 298 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l 298 (441)
++|+-...||+.++ ++.+.++.++|+|.+-+-+ ..|..+..+ .++..+..|.+|.|| ++.+
T Consensus 148 ~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~~~---s~pid~~~~------dvi~agsQKnlgP~G--ltvv 208 (364)
T PRK12462 148 HYVSNETVEGLQFP--------DAAGLPDSPLIADMSSDFM---SRPFDVEAY------GMVYAHAQKNLGPAG--VTVA 208 (364)
T ss_pred EEccCCCCceEecC--------cccccCCCeEEEEcCchhh---CCCCChHHc------cEEEeeccccCCCCc--eEEE
Confidence 88877889999987 2233468999999887632 113333222 378889999999776 7888
Q ss_pred EeeccccccCC---chhHHHHHHHH-hhhcCCCcHHHHHHHHHhcCCCcHH--HHHHHHHHHHHHHHHHHHHHHhCC-Ce
Q 013521 299 VVPEELRYSNG---YPVIKDFNRIV-CTCFNGASNIVQAGGLACLSPDGFQ--ALRTVIDYYKENAKIIVDAFQSLG-LK 371 (441)
Q Consensus 299 ~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~ 371 (441)
+++++.+.... +.+.+...... ...+++++.....++...++--..+ .++.+.++.+++.+.+++.+++.. +.
T Consensus 209 ivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~ 288 (364)
T PRK12462 209 IIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVI 288 (364)
T ss_pred EECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 89988873311 11211111111 1234455555555444443311112 357888888899999999999873 43
Q ss_pred eeC----CCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec--CHHHHHHHHHHHHhh
Q 013521 372 VNG----GKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG--HREYISEACRRLKNF 440 (441)
Q Consensus 372 ~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~~~~~~l~~l~~~ 440 (441)
... ..+-+.+.+++++...++.+.+.++++|+.-..|+. .-+.+|+|+++ +.+.++.+++-|+++
T Consensus 289 ~~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a~~~gl~~lkGhr----~vgg~Ras~yna~~~e~v~~L~~fm~~f 359 (364)
T PRK12462 289 DCHAHRAARSTMNVAFRFRQPRLDTLFKEQSTEAGFCGLSGHR----SIGGIRASLYNAVSEQAVSRLCAFLKDF 359 (364)
T ss_pred cCCCChhhcCcceEEEEcCCHHHHHHHHHHHHHCCCccccCCc----ccCceEEEcCCCCCHHHHHHHHHHHHHH
Confidence 321 124566888886443344445556667998877753 23569999855 789999999888764
No 315
>PLN02880 tyrosine decarboxylase
Probab=99.57 E-value=3.5e-12 Score=127.48 Aligned_cols=308 Identities=15% Similarity=0.099 Sum_probs=190.9
Q ss_pred CCCCCcCcHHHHHHHHHHHhhhCCCCCC-------cEEEcCCcHHHHHH-HHH----hcC-------CCCEEEEeCCCch
Q 013521 109 GYGAEQGNMALRTAIADKFYKDMGIEGD-------EIFISDGAQSDISR-LQM----LLG-------SNVTVAVQDPSFP 169 (441)
Q Consensus 109 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~I~~t~G~~~al~~-l~~----l~~-------~gd~Vlv~~p~y~ 169 (441)
.|...+...++.+.+.+|+.+.++.+.+ .-++|+|++++... +.. .++ +.-.|++.+-+|.
T Consensus 113 ~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~ 192 (490)
T PLN02880 113 SWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS 192 (490)
T ss_pred ccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH
Confidence 4444557889999999999887776643 36788888887543 311 121 1124666888899
Q ss_pred hhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----------CCCccEEEEcCCCCccccCCCHHHHHH
Q 013521 170 AYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----------TSRTDIIFFCSPNNPTGHAATWQQLKK 238 (441)
Q Consensus 170 ~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----------~~~~~~v~i~~p~NPtG~~~~~~~~~~ 238 (441)
++..++..+|... -.++.||++.++++..+.+. ...+-+|+-+-...+||.+-| +++
T Consensus 193 Sv~Kaa~~lGlg~---------~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~e 260 (490)
T PLN02880 193 ALQKACQIAGIHP---------ENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLE 260 (490)
T ss_pred HHHHHHHHcCCCH---------HHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHH
Confidence 9999999999411 14788888754343444221 112344444455889999999 889
Q ss_pred HHHHHHHcCcEEEEcccccccccCCCCCccc-ccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHH
Q 013521 239 LVEFAKANGSIIVYDSAYAAYITDPSPRSIY-EIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFN 317 (441)
Q Consensus 239 i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~-~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~ 317 (441)
|+++|++||+++.+|.+|+.+.... + ... .+.+...-..+..+++|+++ ....+|.+.+++.... ...+.
T Consensus 261 I~~i~~~~~iwlHVDaA~gg~~~~~-~-~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l------~~~~~ 331 (490)
T PLN02880 261 LGKIAKSNGMWFHVDAAYAGSACIC-P-EYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDRNAL------IQSLS 331 (490)
T ss_pred HHHHHHHcCCEEEEehhhHHHHHhC-H-HHHHHhcCchhcCEEEECchhhcC-CCccEEEEEEeCHHHH------HHHHc
Confidence 9999999999999999999754321 1 010 12222223477889999995 8889999998753310 01110
Q ss_pred H---HHhh--------------hcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCce
Q 013521 318 R---IVCT--------------CFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAP 379 (441)
Q Consensus 318 ~---~~~~--------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 379 (441)
. +... .......+.....-..++..|.+.++++.++.-+.++++.+.|++. ++++..++...
T Consensus 332 ~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~ 411 (490)
T PLN02880 332 TNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFS 411 (490)
T ss_pred cCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceE
Confidence 0 0000 0000111111112122333455555666666668889999999876 88887766666
Q ss_pred EEEEEcCCC--Ch-------HHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec---CHHHHHHHHHHHHhh
Q 013521 380 YVWVQFPGS--SS-------WDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG---HREYISEACRRLKNF 440 (441)
Q Consensus 380 ~~~~~~~~~--~~-------~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~---~~~~~~~~l~~l~~~ 440 (441)
.+.+++++. +. .++.+++.++..+.+.+.. + .+..++|+++.+ ++++++.+++.|.++
T Consensus 412 iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~-~--~g~~~lR~~~~n~~tt~~di~~~~~~i~~~ 481 (490)
T PLN02880 412 LVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTV-L--SGKYVLRFAVGAPLTEERHVTAAWKVLQDE 481 (490)
T ss_pred EEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEE-E--CCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 788887531 11 2355566655566665432 2 346799999733 579999999988764
No 316
>PRK06062 hypothetical protein; Provisional
Probab=99.57 E-value=5e-12 Score=125.48 Aligned_cols=338 Identities=14% Similarity=0.105 Sum_probs=189.2
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|. ..+ ..+|.+.+++.+.+.+... ....| . .+.+..+|+.+.+..+-..+.+++++++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--~~~~~-~----~~~~~~lae~L~~~~p~~~~~v~f~~SGsE 123 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCT--VAPAH-A----NDARSEAARLIAERAPGDLSKVFFTNGGAD 123 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCC--cCCcc-C----CHHHHHHHHHHHHhCCCCCCEEEEcCChHH
Confidence 466788887664 222 3678899999998876421 11122 2 233444555554322333469999999999
Q ss_pred HHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCC--Cc------------cCCC
Q 013521 147 DISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN--NF------------FPDL 209 (441)
Q Consensus 147 al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~--~~------------~~~~ 209 (441)
|... + ........+|+...-+|++....+..................+..++..... .+ ..++
T Consensus 124 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 203 (451)
T PRK06062 124 ANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHL 203 (451)
T ss_pred HHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHH
Confidence 9886 4 2223344678889999999754444332110000000000012222211100 00 0001
Q ss_pred CC------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEE
Q 013521 210 ST------TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEI 281 (441)
Q Consensus 210 ~~------~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i 281 (441)
++ ..++.+|+ ..| +.--|.+ .|.+.+++|.++|++||+++|.||++..|...+.......+.-.|| +
T Consensus 204 e~~l~~~~~~~iAavi-iEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD----i 278 (451)
T PRK06062 204 ERVIELEGPSTIAAIL-LESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD----L 278 (451)
T ss_pred HHHHHhcCCCceEEEE-EccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC----e
Confidence 10 13455555 456 5445766 5789999999999999999999999987643332111112222345 4
Q ss_pred ecCCcccCCccc-eeEEEEeeccccccCCchhHHHHHH--HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Q 013521 282 SSFSKFAGFTGV-RLGWTVVPEELRYSNGYPVIKDFNR--IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENA 358 (441)
Q Consensus 282 ~S~SK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 358 (441)
.+|+|.+| .|+ .+|.+++++++. +.+.. +....+++.++++..++.+.|+.-.. +.+.++.++.-
T Consensus 279 ~t~gK~lg-gG~~Pigav~~~~~i~--------~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~G 346 (451)
T PRK06062 279 ITFAKGVN-SGYVPLGGVAISEAIA--------ATFADRPYPGGLTYSGHPLACAAAVATINAMEE---EGIVENAARIG 346 (451)
T ss_pred eeechhhh-cCCcCcEEEEEcHHHH--------HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHH
Confidence 46899998 784 899999888763 33321 11222445678888888888762111 22334444443
Q ss_pred -HHHHHHHHhC----CC--eeeCCCCceEEEEEcCC--C-------------ChHHHHHHHHHhcCeEEeCCCCcCCCCC
Q 013521 359 -KIIVDAFQSL----GL--KVNGGKNAPYVWVQFPG--S-------------SSWDVFAEILEKTHILTIPGSGFGPGGN 416 (441)
Q Consensus 359 -~~l~~~L~~~----g~--~~~~~~~~~~~~~~~~~--~-------------~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 416 (441)
+++.+.|+++ ++ .+. .-|.++-+++.. . ....+...++ ++||.+.+. .
T Consensus 347 ~~~l~~~L~~l~~~~~~v~~vr--G~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~-------~ 416 (451)
T PRK06062 347 AEVLGPGLRELAERHPSVGEVR--GLGVFWALELVADRETREPLAPYGASSAAMAAVKAACK-ERGLLPFVN-------G 416 (451)
T ss_pred HHHHHHHHHHHHhcCCcEEeEe--ccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-HCCcEEeec-------C
Confidence 3444444442 32 222 245555555521 0 0123445555 559998652 2
Q ss_pred CeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 417 EHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 417 ~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
+.+||+- ..+++++++++++|.+++
T Consensus 417 ~~lrl~ppl~~t~~eid~~~~~l~~~l 443 (451)
T PRK06062 417 NRIHVVPPCTVTEDEVREGLAILDAAL 443 (451)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 4689984 569999999999998764
No 317
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.57 E-value=8.7e-13 Score=129.76 Aligned_cols=337 Identities=10% Similarity=0.025 Sum_probs=191.5
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|. ..+ ..+|.+.+++.+.+.+... .....+ ..+.+..+|+.|.+..+...+.+++++++++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~-~~~~~~-----~~~~~~~la~~L~~~~p~~~~~v~f~~SGsE 114 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH-VMFGGI-----THPPAIELCRKLVAMTPQPLECVFLADSGSV 114 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCC-cccccc-----CCHHHHHHHHHHHhhCCCCcCEEEEeCCcHH
Confidence 356788887663 222 3578899999998875421 011111 1234555666654433333478999999999
Q ss_pred HHHH-HH--Hhc-----CCCCEEEEeCCCchhhHhHHHHh-cccc----ccccccCccceeEEeecCCCC---Cc----c
Q 013521 147 DISR-LQ--MLL-----GSNVTVAVQDPSFPAYIDTSVIV-GQAG----KFLKETGKYRNIVYMNCRPEN---NF----F 206 (441)
Q Consensus 147 al~~-l~--~l~-----~~gd~Vlv~~p~y~~~~~~~~~~-g~~~----~~~~~~~~~~~v~~v~~~~~~---~~----~ 206 (441)
|+.. +. ... ....+|+....+|++....+... +... .+.+.. ..+..++..... .+ .
T Consensus 115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~d~ 191 (428)
T PRK07986 115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYL---PENLFAPAPQSRFDGEWDERDI 191 (428)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCC---CCCEEECCCCcccchhhHHHHH
Confidence 9886 42 222 23468999999999854332222 2100 000000 112222221100 00 0
Q ss_pred CCCC----C-CCCccEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCccee
Q 013521 207 PDLS----T-TSRTDIIFFCSP--NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVA 278 (441)
Q Consensus 207 ~~~~----~-~~~~~~v~i~~p--~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~ 278 (441)
.+++ . ..++.+|+ ..| +.-.|.. .+++.+++|.++|++||+++|.||++..|...+.........-.+|
T Consensus 192 ~~l~~~l~~~~~~iaavi-~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PD-- 268 (428)
T PRK07986 192 APFARLMAAHRHEIAAVI-LEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPD-- 268 (428)
T ss_pred HHHHHHHHhCCCcEEEEE-EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCC--
Confidence 0111 1 13444544 455 4445654 4679999999999999999999999976533332211122221344
Q ss_pred EEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHH-----HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHH
Q 013521 279 IEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRI-----VCTCFNGASNIVQAGGLACLSPDGFQALRTVID 352 (441)
Q Consensus 279 i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 352 (441)
|+ +++|.++ .| +.+|.+++++++. +.+... ....+++.++++..++.+.|+.-.. +...+
T Consensus 269 i~--t~gK~l~-gG~~p~~av~~~~~i~--------~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~---~~~~~ 334 (428)
T PRK07986 269 IL--CLGKALT-GGTMTLSATLTTREVA--------ETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES---GDWQQ 334 (428)
T ss_pred EE--Eechhhh-CCcccCcchhchHHHH--------HHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHH
Confidence 33 5899997 78 5888888887763 333321 1222334677888777777752111 23355
Q ss_pred HHHHHHHHHHHHHHhC-C---CeeeCCCCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eec
Q 013521 353 YYKENAKIIVDAFQSL-G---LKVNGGKNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFG 425 (441)
Q Consensus 353 ~~~~~~~~l~~~L~~~-g---~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~ 425 (441)
+.+++-+++.+.|+++ . +.-.. ..|.++-+.+.. .....+...++ ++||.+.+. .+.+|+. +..
T Consensus 335 ~~~~~g~~l~~~l~~l~~~~~i~~vR-g~Gl~~~ve~~~~~~~~~~~~~l~-~~Gl~~~~~-------g~~i~~~Ppl~i 405 (428)
T PRK07986 335 QVAAIEAQLREELAPLRDAPMVADVR-VLGAIGVVETTRPVNMAALQRFFV-EQGVWIRPF-------GKLIYLMPPYII 405 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEeEe-ccceEEEEEeCCcccHHHHHHHHH-HCCcEEEec-------CCEEEEeCCCCC
Confidence 5555666666666654 1 21111 236666677752 22345555555 559999763 1479996 677
Q ss_pred CHHHHHHHHHHHHhhC
Q 013521 426 HREYISEACRRLKNFL 441 (441)
Q Consensus 426 ~~~~~~~~l~~l~~~l 441 (441)
+++++++++++|.+++
T Consensus 406 t~~ei~~~~~~l~~~l 421 (428)
T PRK07986 406 LPEQLQRLTAAVNRAV 421 (428)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 318
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.56 E-value=4.9e-12 Score=125.24 Aligned_cols=340 Identities=14% Similarity=0.122 Sum_probs=189.1
Q ss_pred CCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..|- ..+ ..+|.+.+++.+.+.++..... .++. .+.+..+|+.+.+..+-..+.+.+++++++|
T Consensus 45 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~-----~~~~~~la~~l~~~~p~~~~~v~f~~sGseA 118 (442)
T PRK13360 45 GRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPA-FQMG-----HPKAFELANRIAEIAPGGLNHVFFTNSGSES 118 (442)
T ss_pred CCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCccc-CCcC-----CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHH
Confidence 45678876553 122 3678899999999876431111 1121 2334445555543223234689999999999
Q ss_pred HHH-HH--HhcC-----C-CCEEEEeCCCchhhHhHHHH-hccccccccccCccceeEEeecCCC---CCcc--------
Q 013521 148 ISR-LQ--MLLG-----S-NVTVAVQDPSFPAYIDTSVI-VGQAGKFLKETGKYRNIVYMNCRPE---NNFF-------- 206 (441)
Q Consensus 148 l~~-l~--~l~~-----~-gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~v~~v~~~~~---~~~~-------- 206 (441)
+.. +. .... + ..+|+....+|++....+.. .|....-.........+..+|.... ..+.
T Consensus 119 ~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 198 (442)
T PRK13360 119 VDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGA 198 (442)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHH
Confidence 885 42 2221 2 35799999999996433222 2211000000000012233332210 0010
Q ss_pred ---CCCCC------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCc
Q 013521 207 ---PDLST------TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275 (441)
Q Consensus 207 ---~~~~~------~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~ 275 (441)
.++++ ..++.+|+ ..| +...|.. .+.+.+++|.++|++||+++|.||++..|...+.........-.|
T Consensus 199 ~~~~~le~~l~~~~~~~~aavi-vEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~P 277 (442)
T PRK13360 199 ELADELERLVTLHDASTIAAVI-VEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTP 277 (442)
T ss_pred HHHHHHHHHHHhcCCCcEEEEE-EccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCC
Confidence 01111 13444544 566 5556765 578899999999999999999999997664333221111222234
Q ss_pred ceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH-------HHhhhcCCCcHHHHHHHHHhcCCCcHHHH
Q 013521 276 EVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR-------IVCTCFNGASNIVQAGGLACLSPDGFQAL 347 (441)
Q Consensus 276 ~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 347 (441)
| +-+|+|.++ .| +.+|.+++++++. +.+.. .....+.+.+++...++.+.++.-..
T Consensus 278 D----ivt~gK~l~-gG~~P~gav~~~~~i~--------~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~--- 341 (442)
T PRK13360 278 D----LLTCAKGLT-NGAIPMGAVFVSSEIH--------DAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER--- 341 (442)
T ss_pred c----eeeeeeccc-cCccceEEEEEcHHHH--------HHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh---
Confidence 4 337899997 66 7899998887763 22221 11122344677888777777752111
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC-CeeeC--CCCceEEEEEcCC---C---ChHHHHHHHHHhcCeEEeCCCCcCCCCCCe
Q 013521 348 RTVIDYYKENAKIIVDAFQSLG-LKVNG--GKNAPYVWVQFPG---S---SSWDVFAEILEKTHILTIPGSGFGPGGNEH 418 (441)
Q Consensus 348 ~~~~~~~~~~~~~l~~~L~~~g-~~~~~--~~~~~~~~~~~~~---~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~ 418 (441)
+.+.++.+++.+++.+.|+++. ..... ...|.+.-+.+.. . ...++...+++ +||.+.+. .+.
T Consensus 342 ~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~-~Gvl~~~~-------~~~ 413 (442)
T PRK13360 342 EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFE-KGLMIRYT-------GDI 413 (442)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHH-CCcEEEec-------CCE
Confidence 2345566666667777776541 11111 1124443344421 1 12345566555 59999763 246
Q ss_pred EEEE--eecCHHHHHHHHHHHHhhC
Q 013521 419 IRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 419 iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+||+ +..+++++++++++|.+++
T Consensus 414 lr~~Ppl~~t~~eid~~~~~l~~~l 438 (442)
T PRK13360 414 LALSPPLIIEEAQIDELFDILAQAL 438 (442)
T ss_pred EEEeCCCccCHHHHHHHHHHHHHHH
Confidence 9999 5669999999999998764
No 319
>PRK06917 hypothetical protein; Provisional
Probab=99.56 E-value=1.2e-11 Score=122.62 Aligned_cols=348 Identities=10% Similarity=0.039 Sum_probs=193.1
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|- ..+ ..+|.+.+++++.+.+... .....|. .+.+..+|+.+....+-..+.+++++++++
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~-~~~~~~~-----~~~~~~lae~L~~~~p~~~~~v~f~~sGsE 102 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSF-VYRSQFT-----SEPAEKLAKKLSDLSPGDLNWSFFVNSGSE 102 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcC-ccccccC-----CHHHHHHHHHHHHhCCCCCCEEEEeCChHH
Confidence 456788887663 222 3679999999999876321 1111232 234445555554323333368999999999
Q ss_pred HHHH-HHHh--c------CCCCEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCCC--ccC-------
Q 013521 147 DISR-LQML--L------GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPENN--FFP------- 207 (441)
Q Consensus 147 al~~-l~~l--~------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~~--~~~------- 207 (441)
|+.. +... . ....+|+....+|++....+........... .......+..++...... +..
T Consensus 103 Ave~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 182 (447)
T PRK06917 103 ANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQL 182 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHH
Confidence 9886 4222 1 1236799999999997544433221100000 000000112222110000 000
Q ss_pred ----CCC----C--CCCccEEEEcCC-C-Ccccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCC
Q 013521 208 ----DLS----T--TSRTDIIFFCSP-N-NPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGA 274 (441)
Q Consensus 208 ----~~~----~--~~~~~~v~i~~p-~-NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~ 274 (441)
.++ . .+++.+|+ ..| + |--|. ..|.+.+++|.++|++||+++|.||++..|...+.......+.-.
T Consensus 183 ~~~~~le~~i~~~~~~~iAAvi-~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~ 261 (447)
T PRK06917 183 ACATELETAIERIGAEHIAAFI-AEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVE 261 (447)
T ss_pred HHHHHHHHHHHhcCCCceEEEE-EeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCC
Confidence 011 1 12455555 466 3 33344 467999999999999999999999999865433322111223223
Q ss_pred cceeEEEecCCcccCCccc-eeEEEEeeccccccCCchhHHHHHH----HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHH
Q 013521 275 REVAIEISSFSKFAGFTGV-RLGWTVVPEELRYSNGYPVIKDFNR----IVCTCFNGASNIVQAGGLACLSPDGFQALRT 349 (441)
Q Consensus 275 ~~~~i~i~S~SK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 349 (441)
|| +-+++|.++ .|+ .+|.+++++++. +.+.. +....+.+.++++..++.+.++.-.. +.
T Consensus 262 PD----i~~~gK~l~-~G~~Pi~a~~~~~~i~--------~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~ 325 (447)
T PRK06917 262 PD----IMTLGKGLG-AGYTPIAATVVSDRVM--------EPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK---HN 325 (447)
T ss_pred CC----EEEeeehhc-cCCcceEEEEEcHHHH--------HHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH---CC
Confidence 45 346899998 885 899999988773 33321 11122344678888888888762111 23
Q ss_pred HHHHHHHHHHHHHHHHHhC----CCeeeCCCCceEEEEEcCC-------C-C----hHHHHHHHHHhcCeEEeCCCC-cC
Q 013521 350 VIDYYKENAKIIVDAFQSL----GLKVNGGKNAPYVWVQFPG-------S-S----SWDVFAEILEKTHILTIPGSG-FG 412 (441)
Q Consensus 350 ~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~-------~-~----~~~~~~~ll~~~gi~v~pg~~-f~ 412 (441)
+.++.++.-+.+.+.|+++ ++......-|.++.+++.. . . ...+...+++ +||.+.|... ..
T Consensus 326 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~~~ 404 (447)
T PRK06917 326 LPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAK-NGLLLYPAVAGQD 404 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHh-CCcEEEecccccC
Confidence 4455555556666665543 3221111245566565521 0 1 1234455554 5999987421 11
Q ss_pred CCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 413 PGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 413 ~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
....+.+|++ +..+++++++++++|.+++
T Consensus 405 g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l 435 (447)
T PRK06917 405 GKEGDAVIIAPPMTITYSELDELLSIFAKSV 435 (447)
T ss_pred CCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 1124689998 5579999999999998764
No 320
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.56 E-value=3.1e-12 Score=114.02 Aligned_cols=319 Identities=15% Similarity=0.135 Sum_probs=194.2
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCC-cEEEcCCcHHHHHH-HHHhcCCCCEEEE
Q 013521 86 IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD-EIFISDGAQSDISR-LQMLLGSNVTVAV 163 (441)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~I~~t~G~~~al~~-l~~l~~~gd~Vlv 163 (441)
.|+.+.+|+.. +...+-.| ...++.+.+-+=++.-|..... -.++...++.+++. +..++.|||.|++
T Consensus 28 l~~~V~~A~~~--------~~lgh~sP--e~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv 97 (385)
T KOG2862|consen 28 LSGRVQEAMSR--------PSLGHMSP--EFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLV 97 (385)
T ss_pred CCHHHHHhhcC--------CccccCCH--HHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEE
Confidence 56766666655 33322222 2333333333222222343333 44455555778887 7889999999999
Q ss_pred eCCCchh--hHhHHHHhccccccccccCccceeEEeecCCCCCccCCC-C---CCCCccEEEEcCCCCccccCCCHHHHH
Q 013521 164 QDPSFPA--YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDL-S---TTSRTDIIFFCSPNNPTGHAATWQQLK 237 (441)
Q Consensus 164 ~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~-~---~~~~~~~v~i~~p~NPtG~~~~~~~~~ 237 (441)
-.-+-++ +..+.+.+| ++|..++.+.......+. . ...+++++++++-...||+.-+ -++
T Consensus 98 ~~~G~wg~ra~D~~~r~g------------a~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~--~~~ 163 (385)
T KOG2862|consen 98 VSTGTWGQRAADCARRYG------------AEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQD--LLA 163 (385)
T ss_pred EEechHHHHHHHHHHhhC------------ceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccch--HHH
Confidence 7766655 356666677 588888887654433221 1 1378999999998889999876 244
Q ss_pred HHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccccc---CCc----
Q 013521 238 KLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYS---NGY---- 310 (441)
Q Consensus 238 ~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~---~~~---- 310 (441)
.+-++|++|+.++++|.+-+- . +.+. .+| .++..+....-.|.+|.| ..++-+..++..++. .+.
T Consensus 164 ~~g~lc~k~~~lllVD~VaSl-g--gt~F---~mD-ewgVDvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~ 235 (385)
T KOG2862|consen 164 ISGELCHKHEALLLVDTVASL-G--GTEF---EMD-EWGVDVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVS 235 (385)
T ss_pred HHHHHhhcCCeEEEEechhhc-C--Cccc---eeh-hhcccEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceE
Confidence 556778899999999998762 2 1122 233 245557777778999853 345556666655311 000
Q ss_pred ---hhHHHHHHHHh----hh-cCCCcH---HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC---
Q 013521 311 ---PVIKDFNRIVC----TC-FNGASN---IVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGK--- 376 (441)
Q Consensus 311 ---~~~~~~~~~~~----~~-~~~~~~---~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--- 376 (441)
+.......+.. .. ..+++. .+..++++.+. .+.+++..++.++..+.++..|+++|++.....
T Consensus 236 ~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~---eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~ 312 (385)
T KOG2862|consen 236 FYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIA---EEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEEL 312 (385)
T ss_pred EEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhh
Confidence 00000000000 01 112332 23344444444 345688899999999999999999987664321
Q ss_pred -CceEEEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ec-CHHHHHHHHHHHHhhC
Q 013521 377 -NAPYVWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FG-HREYISEACRRLKNFL 441 (441)
Q Consensus 377 -~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~-~~~~~~~~l~~l~~~l 441 (441)
.-....+.+| +.+-.+.+.+++..+++.+.-| .++..+..+||++ ++ +.+.++..++.|+.++
T Consensus 313 rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gg--lg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~al 380 (385)
T KOG2862|consen 313 RLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGG--LGPTVGKVFRIGLLGCNANVEYIDNVVELLKLAL 380 (385)
T ss_pred ccCcceeeecCCCCCHHHHHHHHHHhcCEEeccc--cCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHH
Confidence 1223456666 5677788999998877777544 3566688999995 22 6788888888887653
No 321
>PRK06105 aminotransferase; Provisional
Probab=99.56 E-value=5.7e-12 Score=125.40 Aligned_cols=342 Identities=11% Similarity=0.058 Sum_probs=191.5
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|. ..+ ..+|.+.+++.+.+.+.........| ..+.+.++|+.|.+..+...+.+++++++++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~~v~f~~SGse 120 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHK-----SHGPVIDLAEKLVAMAPVPMSKVFFTNSGSE 120 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeeccccc-----CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 356788887663 222 36789999999998763210111112 2234444555554433433468999999999
Q ss_pred HHHHHHHh---c----C-C-CCEEEEeCCCchhhHhHHHHhcc-ccccccccCccceeEEeecCCCCCc-----------
Q 013521 147 DISRLQML---L----G-S-NVTVAVQDPSFPAYIDTSVIVGQ-AGKFLKETGKYRNIVYMNCRPENNF----------- 205 (441)
Q Consensus 147 al~~l~~l---~----~-~-gd~Vlv~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~v~~v~~~~~~~~----------- 205 (441)
|......+ . . + ..+|+...-+|++.......+.. .............+..++......+
T Consensus 121 Ave~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 200 (460)
T PRK06105 121 ANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFA 200 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHH
Confidence 99863222 1 1 2 35788888899886533322211 1000000000011222222110000
Q ss_pred ---cCCCCC------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCC
Q 013521 206 ---FPDLST------TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGA 274 (441)
Q Consensus 206 ---~~~~~~------~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~ 274 (441)
..+++. ..++.+|+ ..| +.--|.. .|++.++++.++|++||+++|.||++..|...+.......++-.
T Consensus 201 ~~~~~~le~~~~~~~~~~iAavI-vEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~ 279 (460)
T PRK06105 201 TRLANELEALILAEGPDTIAAFI-GEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIK 279 (460)
T ss_pred HHHHHHHHHHHHHcCCCceEEEE-EccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCC
Confidence 001111 13455544 466 6556765 58999999999999999999999999766443322222222223
Q ss_pred cceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHHH-------HhhhcCCCcHHHHHHHHHhcCCCcHHH
Q 013521 275 REVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNRI-------VCTCFNGASNIVQAGGLACLSPDGFQA 346 (441)
Q Consensus 275 ~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~ 346 (441)
|| |-+++|.++ .| +.+|.+++++++. +.+... ....+++.++++..++.+.|+.-..
T Consensus 280 PD----i~~~gK~lg-gG~~P~~av~~~~~i~--------~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~-- 344 (460)
T PRK06105 280 PD----ILVMSKQLS-SSYQPLSAVLMNEKVY--------DPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE-- 344 (460)
T ss_pred CC----eeeeecccc-cCcccceEEEEcHHHH--------HHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh--
Confidence 45 446899998 66 6899999988763 333211 1123445778888877777752111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCeeeCCCCceEEEEEcCCC-------C-----hHHHHHHHHHhcCeEEeCCCCc
Q 013521 347 LRTVIDYYKENAKIIVDAFQSL---GLKVNGGKNAPYVWVQFPGS-------S-----SWDVFAEILEKTHILTIPGSGF 411 (441)
Q Consensus 347 ~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~ll~~~gi~v~pg~~f 411 (441)
+++.+..++..+++.+.|+++ ++......-|.++-+++... + ...+...++ ++||.+.|.
T Consensus 345 -~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~-~~Gvl~~~~--- 419 (460)
T PRK06105 345 -RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAH-EHGVISRAM--- 419 (460)
T ss_pred -ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHH-HCCeEEEec---
Confidence 234455555556666665543 22111112456655655210 0 123444444 569999773
Q ss_pred CCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 412 GPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 412 ~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.+.+|++ +..+++++++++++|.+++
T Consensus 420 ----g~~i~l~Ppl~it~~eid~~~~~l~~~l 447 (460)
T PRK06105 420 ----GDTLAFCPPLIITAAQVDEMVDRFGRAL 447 (460)
T ss_pred ----CCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 2479998 4458999999999998764
No 322
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=3e-12 Score=127.38 Aligned_cols=340 Identities=13% Similarity=0.074 Sum_probs=191.9
Q ss_pred CCCCeEEeCCCC--CC-CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TT-QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~-~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|- .. -..+|.+.+++.+.+.++.. .....+ .. +.+..+|+.+.+..+...+.+++++++++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~-~~~~~~-~~----~~~~~lae~L~~~~p~~~~~v~f~~SGse 127 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAH-STLLGL-AN----VPSILLAEKLIEVVPEGLKKVFYSDSGAT 127 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCC-cccccc-CC----HHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 456788886653 22 24678899999999876431 111112 22 23334444443323333368999999999
Q ss_pred HHHH-HH--Hhc-----CC-CCEEEEeCCCchhhHhHHHHhccccccc-cccCccceeEEeecCCCCC--c--cC-----
Q 013521 147 DISR-LQ--MLL-----GS-NVTVAVQDPSFPAYIDTSVIVGQAGKFL-KETGKYRNIVYMNCRPENN--F--FP----- 207 (441)
Q Consensus 147 al~~-l~--~l~-----~~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~v~~v~~~~~~~--~--~~----- 207 (441)
|... +. ... .+ ..+|+....+|++....+.......... ........+..+|...... + .+
T Consensus 128 Ave~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~ 207 (460)
T PRK06916 128 AVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVK 207 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence 9886 42 111 12 3688999999999654333322111000 0000001222332211000 0 00
Q ss_pred ----C----CCC-CCCccEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCc
Q 013521 208 ----D----LST-TSRTDIIFFCSP--NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275 (441)
Q Consensus 208 ----~----~~~-~~~~~~v~i~~p--~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~ 275 (441)
. ++. .+++.+|++ .| +.-.|.+ .|++.++++.++|++||+++|.||++..|...+.......+.-.|
T Consensus 208 ~~~~~l~~~l~~~~~~iAAvi~-EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~P 286 (460)
T PRK06916 208 KHLEELEELLKEKHEEIAAIIV-EPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTP 286 (460)
T ss_pred HHHHHHHHHHHhCCCcEEEEEE-eccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCC
Confidence 0 111 145556554 55 5656765 699999999999999999999999987664333221222222234
Q ss_pred ceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH-------HHhhhcCCCcHHHHHHHHHhcCCCcHHHH
Q 013521 276 EVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR-------IVCTCFNGASNIVQAGGLACLSPDGFQAL 347 (441)
Q Consensus 276 ~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 347 (441)
| | -+++|.++ .| +.+|.+++++++. +.+.. .....+.+.++++..++.+.++.-..
T Consensus 287 D--i--v~~gK~l~-gG~~Pi~av~~~~ei~--------~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--- 350 (460)
T PRK06916 287 D--I--MTAGKGLT-GGYLPIAITVTTDEIY--------NAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK--- 350 (460)
T ss_pred C--e--eeeehhhh-cCccccceeeecHHHH--------HHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh---
Confidence 5 2 35899998 88 5999999988773 32321 11222344678888888887752111
Q ss_pred HHHHHHHHHHHHHHHHHHHhC---C-CeeeCCCCceEEEEEcCCC--------C----hHHHHHHHHHhcCeEEeCCCCc
Q 013521 348 RTVIDYYKENAKIIVDAFQSL---G-LKVNGGKNAPYVWVQFPGS--------S----SWDVFAEILEKTHILTIPGSGF 411 (441)
Q Consensus 348 ~~~~~~~~~~~~~l~~~L~~~---g-~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~ll~~~gi~v~pg~~f 411 (441)
+.+.++.++.-+++.+.|+++ . +.-.. .-|.++-+++... . ...+...++ ++||.+.|.
T Consensus 351 ~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vr-G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~--- 425 (460)
T PRK06916 351 TNLIEQVARKTEYVATQLEDLFALKHVGDIR-QLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSR-ELGMLTRPL--- 425 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhcCCCeEEee-cCCceeeEEeecccccccCCCchhhHHHHHHHHHH-HCCeEEEec---
Confidence 234455666666666666654 2 11112 2355555555310 0 123445555 459999773
Q ss_pred CCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 412 GPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 412 ~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.+.+|+. +..+++++++++++|.++|
T Consensus 426 ----g~~l~~~Ppl~it~~~id~~~~~l~~~l 453 (460)
T PRK06916 426 ----GNTIVFMPPLASTIDELDEMLRILYKAI 453 (460)
T ss_pred ----CCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 1468887 5668999999999998764
No 323
>PRK07046 aminotransferase; Validated
Probab=99.55 E-value=4.3e-12 Score=125.81 Aligned_cols=334 Identities=13% Similarity=0.071 Sum_probs=182.9
Q ss_pred CCCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcH
Q 013521 69 HPDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQ 145 (441)
Q Consensus 69 ~~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~ 145 (441)
..++.+||+..|.. .+ ..+|.+.+++++.+.+. ....+ +. +....+|+.+.+.++ .+.+.++++++
T Consensus 72 ~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~----~~~~~-~~----~~~~~lAe~l~~~~~--~~~v~F~nSGt 140 (453)
T PRK07046 72 VDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRG----LTTML-PS----EDAAWVGEELARRFG--LPYWQVATTAT 140 (453)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHHhC----CCCCC-CC----HHHHHHHHHHHHHhC--CCEEEEECCHH
Confidence 34677899876642 22 36789999999988752 11222 22 333444444443233 57999999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHH---hccc---cccccccC-ccceeEEeecCCCCCccCCCCCCCCc
Q 013521 146 SDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVI---VGQA---GKFLKETG-KYRNIVYMNCRPENNFFPDLSTTSRT 215 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~---~g~~---~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~~~~ 215 (441)
+|... + .......++|+...-+|++....... .+.. ........ ....+..++.++...+...+ ...++
T Consensus 141 EA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l-~~~~v 219 (453)
T PRK07046 141 DANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAAL-ADGDV 219 (453)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHh-CCCCe
Confidence 99875 3 23334457899899999996432211 1100 00000000 00112222221110110001 12455
Q ss_pred cEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccc
Q 013521 216 DIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGV 293 (441)
Q Consensus 216 ~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~ 293 (441)
.+|+ ..| +.-.|.+ .+.+.++++.++|++||+++|.||+.. |..+- ......+.-.|| + -+++|.+| .|+
T Consensus 220 Aavi-~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~-Gg~~~~~gv~PD--i--~t~gK~lg-gG~ 291 (453)
T PRK07046 220 AAVL-AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGP-GGYTRAHGLEPD--F--LVVGKPIA-GGV 291 (453)
T ss_pred EEEE-ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCC-cchhHHhCCCcc--c--eeehhhhc-CCC
Confidence 5555 466 4334544 566899999999999999999999986 43221 111111222344 3 35899998 899
Q ss_pred eeEEEEeeccccccCCchhHHHHHHH---------HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH
Q 013521 294 RLGWTVVPEELRYSNGYPVIKDFNRI---------VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDA 364 (441)
Q Consensus 294 r~G~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 364 (441)
.+|.+++++++. +.+... ....+++.++++..++.+.|+.-.. +...++.++.-+.+.+.
T Consensus 292 Pi~av~g~~~i~--------~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~~~ 360 (453)
T PRK07046 292 PCAVYGFSAELA--------ERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT---EAAYAHMLALAARLAAG 360 (453)
T ss_pred cceeeeehHHHH--------HHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHH
Confidence 999999988873 333211 1112334678888888888762111 12233333344444444
Q ss_pred H----HhCCCeeeCCCCceEEEEEcC-C-C-C--------h----HHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec
Q 013521 365 F----QSLGLKVNGGKNAPYVWVQFP-G-S-S--------S----WDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG 425 (441)
Q Consensus 365 L----~~~g~~~~~~~~~~~~~~~~~-~-~-~--------~----~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~ 425 (441)
| .++++......-|..+.+.+. + . + + ..+...+++ +||.+.|. .+.++++...
T Consensus 361 L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~-------~~~~~~~p~~ 432 (453)
T PRK07046 361 LRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLN-RGVLITPF-------HNMMLVCPAT 432 (453)
T ss_pred HHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHH-CCCEEecc-------cCcEEEeCCC
Confidence 4 344543211112333344331 1 0 0 1 123444554 59999762 1357888777
Q ss_pred CHHHHHHHHHHHHhhC
Q 013521 426 HREYISEACRRLKNFL 441 (441)
Q Consensus 426 ~~~~~~~~l~~l~~~l 441 (441)
++++++++++++.+++
T Consensus 433 t~~did~~~~~~~~~l 448 (453)
T PRK07046 433 TAADVDRLVAAFDACL 448 (453)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998763
No 324
>PRK07036 hypothetical protein; Provisional
Probab=99.55 E-value=9.5e-12 Score=123.91 Aligned_cols=342 Identities=12% Similarity=0.076 Sum_probs=191.6
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|. ..+ ..+|.+.+++.+.+.+.. ....+. ....+.+..+|+.+....+-..+.+++++++++
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~---~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGse 123 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLP---YYTPFG--DMTNAPAAELAAKLAELAPGDLNHVFLTTGGST 123 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCc---cccccc--ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchH
Confidence 456788887663 222 357889999999887532 111111 012334555666654433333468999999999
Q ss_pred HHHH-HH--Hhc----C-C-CCEEEEeCCCchhhHhHHHHhccccccc-cccCccceeEEeecCCCC----C-----cc-
Q 013521 147 DISR-LQ--MLL----G-S-NVTVAVQDPSFPAYIDTSVIVGQAGKFL-KETGKYRNIVYMNCRPEN----N-----FF- 206 (441)
Q Consensus 147 al~~-l~--~l~----~-~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~v~~v~~~~~~----~-----~~- 206 (441)
|+.. +. ... . + ..+|+...-+|++....+.......... ........+..++..... + +.
T Consensus 124 Ave~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 203 (466)
T PRK07036 124 AVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCD 203 (466)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHH
Confidence 9886 42 111 1 2 3678888999999654333222111000 000000012222221100 0 00
Q ss_pred ---CCCC------CCCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCccc-ccCCC
Q 013521 207 ---PDLS------TTSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIY-EIPGA 274 (441)
Q Consensus 207 ---~~~~------~~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~-~~~~~ 274 (441)
.+++ ..+++.+|++ .| +.-.|.. .|++.+++|.++|++||+++|.||+...|...+...... .+.-.
T Consensus 204 ~~~~~~~~~i~~~~~~~iAavi~-EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~ 282 (466)
T PRK07036 204 FLVDEFEDKILSLGADNIAAFIA-EPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQ 282 (466)
T ss_pred HHHHHHHHHHHHcCCCceEEEEE-eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCC
Confidence 0011 1234555554 55 5556765 578899999999999999999999998664433222222 12223
Q ss_pred cceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH-------HHhhhcCCCcHHHHHHHHHhcCCCcHHH
Q 013521 275 REVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR-------IVCTCFNGASNIVQAGGLACLSPDGFQA 346 (441)
Q Consensus 275 ~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 346 (441)
|| |-+++|.++ .| +.+|.+++++++. +.+.. +....+++.++++..++.+.|+.-..
T Consensus 283 PD----ivt~gK~l~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~-- 347 (466)
T PRK07036 283 PD----IITFAKGLT-SGYQPLGAVIISERLL--------DVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER-- 347 (466)
T ss_pred CC----EEEEccccc-cCccccEEEEEcHHHH--------HHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh--
Confidence 45 346899998 78 5899999988873 33321 11222445678888888887762111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCeeeCCCCceEEEEEcCC-C-------C----hHHHHHHHHHhcCeEEeCCCCc
Q 013521 347 LRTVIDYYKENAKIIVDAFQSL---GLKVNGGKNAPYVWVQFPG-S-------S----SWDVFAEILEKTHILTIPGSGF 411 (441)
Q Consensus 347 ~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~-~-------~----~~~~~~~ll~~~gi~v~pg~~f 411 (441)
+++.+..++.-+++.+.|+++ ++......-|.++.+++.. . . ...+...++ ++||.+.|.
T Consensus 348 -~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~--- 422 (466)
T PRK07036 348 -EGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQ-ERGLLVRPL--- 422 (466)
T ss_pred -CCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHH-HCCcEEeec---
Confidence 234445555555555555443 3211111246666677631 0 0 123444444 459999763
Q ss_pred CCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 412 GPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 412 ~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.+.+|++ +..+++++++++++|.+++
T Consensus 423 ----~~~~~l~Ppl~it~~~id~~~~~l~~al 450 (466)
T PRK07036 423 ----EHLCVLSPPLIITRAQIDEIVAILRAAI 450 (466)
T ss_pred ----CCEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 1467888 5568999999999997753
No 325
>PRK07483 hypothetical protein; Provisional
Probab=99.55 E-value=1.3e-11 Score=122.37 Aligned_cols=344 Identities=11% Similarity=0.084 Sum_probs=192.8
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|- ..+ ..+|.+.+++.+.+.+.... ....| ..+....+|+.+....+-..+.+++++++++
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~-~~~~~-----~~~~~~~lae~L~~~~p~~~~~v~f~~sGsE 101 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYA-HTSFF-----TTEPAEALADRLVAAAPAGLEHVYFVSGGSE 101 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCc-ccccc-----CCHHHHHHHHHHHHhCCCCCCEEEEcCCcHH
Confidence 356788887663 222 36788999999998753210 01112 1234445555554322323469999999999
Q ss_pred HHHH-HH--Hhc-----CCC-CEEEEeCCCchhhHhHHHHhcccc----ccccccCccceeEEeecCCCCCcc-------
Q 013521 147 DISR-LQ--MLL-----GSN-VTVAVQDPSFPAYIDTSVIVGQAG----KFLKETGKYRNIVYMNCRPENNFF------- 206 (441)
Q Consensus 147 al~~-l~--~l~-----~~g-d~Vlv~~p~y~~~~~~~~~~g~~~----~~~~~~~~~~~v~~v~~~~~~~~~------- 206 (441)
|... +. ... ++| .+|+...-+|++............ .+.+.. ..+..++........
T Consensus 102 Ave~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK07483 102 AVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLL---IEAHHVSPCYAYREQRAGESDE 178 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCC---CCCEEeCCCccccccccCCCHH
Confidence 9885 42 222 133 578888999998754333322110 000000 122223221100000
Q ss_pred -------CCCCC------CCCccEEEEcCC-CC-ccc-cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccc
Q 013521 207 -------PDLST------TSRTDIIFFCSP-NN-PTG-HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYE 270 (441)
Q Consensus 207 -------~~~~~------~~~~~~v~i~~p-~N-PtG-~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~ 270 (441)
.+++. .+++.+|++ .| +- --| ...|++.+++|.++|++||+++|.||+...|...+.......
T Consensus 179 ~~~~~~~~~l~~~~~~~~~~~iAAviv-EPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~ 257 (443)
T PRK07483 179 AYGQRLADELEAKILELGPDTVAAFVA-ETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEE 257 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEE-eCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhh
Confidence 01111 134555554 66 42 235 456788999999999999999999999987644332222222
Q ss_pred cCCCcceeEEEecCCcccCCccc-eeEEEEeeccccccCCchhHHHHHH----HHhhhcCCCcHHHHHHHHHhcCCCcHH
Q 013521 271 IPGAREVAIEISSFSKFAGFTGV-RLGWTVVPEELRYSNGYPVIKDFNR----IVCTCFNGASNIVQAGGLACLSPDGFQ 345 (441)
Q Consensus 271 ~~~~~~~~i~i~S~SK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~ 345 (441)
+.-.|| |-+++|.++ .|+ .+|.+++++++. +.+.. .....+++.++++..++.+.++.-..
T Consensus 258 ~gv~PD----iv~~gK~l~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~- 323 (443)
T PRK07483 258 DGVAPD----LVTIAKGLG-AGYQPIGAVLASDRIY--------DAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE- 323 (443)
T ss_pred cCCCCC----eeeehhhhc-cCccccEEEEEcHHHH--------HHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh-
Confidence 222355 345799998 886 999999988773 33321 11223445688888888888762111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh----CCCe-eeCCCCceEEEEEcCCC-------C-----hHHHHHHHHHhcCeEEeCC
Q 013521 346 ALRTVIDYYKENAKIIVDAFQS----LGLK-VNGGKNAPYVWVQFPGS-------S-----SWDVFAEILEKTHILTIPG 408 (441)
Q Consensus 346 ~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~~~~~~~~~-------~-----~~~~~~~ll~~~gi~v~pg 408 (441)
+.+.++.++.-+++.+.|++ ++.. -.. ..|.++-+++... + ...+...+++ +|+.+.+.
T Consensus 324 --~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vR-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~ 399 (443)
T PRK07483 324 --DGLLANVRARGEQLRARLRERLGQHPHVGDIR-GRGLFVGVELVADRATKAPFDPALKLHARIKREAMA-RGLMVYPM 399 (443)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEe-ecccEEEEEEeecccccCCCCchhhHHHHHHHHHHH-CCcEEEec
Confidence 23444455555555555543 3321 122 2455555555210 0 1234555555 59999874
Q ss_pred CC-cCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 409 SG-FGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 409 ~~-f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.. ......+.+||. +..+++++++++++|.++|
T Consensus 400 ~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l 435 (443)
T PRK07483 400 GGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAI 435 (443)
T ss_pred CccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 21 111124689997 5669999999999998764
No 326
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.55 E-value=4e-12 Score=125.11 Aligned_cols=313 Identities=15% Similarity=0.146 Sum_probs=173.5
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCC---CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEE
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYG---AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTV 161 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~---~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~V 161 (441)
+.|+.+.+++.+.+..+.+.. ..+. ...-...+++.+|++. |.+ ..+++++++.|+.++...+.+||+|
T Consensus 92 ~l~~~vieAv~~~~~~y~~l~--~~l~~g~~g~r~~~le~~lA~l~----gae--~alvv~sg~aAi~l~l~~l~~GdeV 163 (454)
T TIGR00474 92 PLAEEAIEAVTDAARGYSNLE--YDLETGKRGSRYSHVEGLLCELT----GAE--DALVVNNNAAAVLLALNTLAKGKEV 163 (454)
T ss_pred CCCHHHHHHHHHHHhcccchh--ccccccccchHHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHhCCcCEE
Confidence 468999999999888654211 1111 0112467888888875 543 3456677777888755668999999
Q ss_pred EEeCCCch---hh---HhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCcc--c--c
Q 013521 162 AVQDPSFP---AY---IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPT--G--H 229 (441)
Q Consensus 162 lv~~p~y~---~~---~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPt--G--~ 229 (441)
++....|. +. .......| ++++.++.+.... ..+++. .+++++|++.+++||+ | .
T Consensus 164 Ivs~~e~v~~ggs~~i~~~~~~~G------------~~~~~v~~~~~~~-l~dle~aI~~~T~lv~~~h~sN~~~~G~~~ 230 (454)
T TIGR00474 164 IVSRGELVEIGGSFRIPDVMEQSG------------AKLVEVGTTNRTH-LKDYEDAITENTALLLKVHTSNYRIVGFTE 230 (454)
T ss_pred EECCChhhhhcchhhHHHHHHHcC------------CEEEEeCCCCCCC-HHHHHHhcCcCCEEEEEEccCcccccCCCC
Confidence 99887643 21 22344455 4777776543211 122222 4789999999999995 6 4
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEccccccccc------CCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecc
Q 013521 230 AATWQQLKKLVEFAKANGSIIVYDSAYAAYIT------DPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE 303 (441)
Q Consensus 230 ~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~------~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~ 303 (441)
..+ +++|+++|++||+++|+|...+-+.. ...| .+.... ..+..+++.|.+|.+| |...|+++++++
T Consensus 231 ~~d---l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p-~~~~~~-~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~ 303 (454)
T TIGR00474 231 EVS---IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEP-TVQEVI-AAGVDLVTFSGDKLLG--GPQAGIIVGKKE 303 (454)
T ss_pred CCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCc-ccccHh-HcCCCEEEecCccccC--CCeEEEEEECHH
Confidence 567 89999999999999999986443211 0111 111111 1233499999999986 335899999887
Q ss_pred ccccCCchhHHHHHH-HHhhhcCCCcHHHHHHHHHhcCC--------CcHHHHHHHHHHHHHHHHHHHHHHHhC---CC-
Q 013521 304 LRYSNGYPVIKDFNR-IVCTCFNGASNIVQAGGLACLSP--------DGFQALRTVIDYYKENAKIIVDAFQSL---GL- 370 (441)
Q Consensus 304 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~- 370 (441)
++..-. ...+.+ ++. .-.......+.+..+.+ .+.+.+....+..+++...+.+.|++. ++
T Consensus 304 ~i~~l~---~~~l~r~lr~---~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~ 377 (454)
T TIGR00474 304 LIERLK---KNPLTRALRV---DKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFE 377 (454)
T ss_pred HHHhhh---hchhHHHHhh---ChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCce
Confidence 742100 000111 110 00000111111111111 122333444556667788888888763 22
Q ss_pred -eeeCCC----Cc---------eEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec-CHHHHHHHHH
Q 013521 371 -KVNGGK----NA---------PYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG-HREYISEACR 435 (441)
Q Consensus 371 -~~~~~~----~~---------~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~-~~~~~~~~l~ 435 (441)
++.+.. +| .-+.++..+....++.+ .|++....|.. ...++.+.+.+-+ .+++++..++
T Consensus 378 ~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~-~lr~~~~~ii~-----r~~~~~~~ld~r~~~~~~~~~~~~ 451 (454)
T TIGR00474 378 LEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEA-RLRELPPPIIG-----RIEDDRFLLDLRTLLEDEEELLIE 451 (454)
T ss_pred EEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHH-HHhcCCCCEEE-----EEECCEEEEEeCcCCHHHHHHHHH
Confidence 222211 11 12334333334445544 45554422221 1235667777633 6788888887
Q ss_pred HH
Q 013521 436 RL 437 (441)
Q Consensus 436 ~l 437 (441)
+|
T Consensus 452 ~~ 453 (454)
T TIGR00474 452 AL 453 (454)
T ss_pred Hh
Confidence 76
No 327
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.55 E-value=2.5e-12 Score=126.94 Aligned_cols=341 Identities=12% Similarity=0.025 Sum_probs=190.0
Q ss_pred CCCCeEEeCCCC---CCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD---TTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~---~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.+++++|+..|. +--..+|.+.+++.+.+.+... ....+.......++-+.+++. .+-.-+.+++++++++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~l~~~----~~~~~~~v~f~~sGse 116 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSH--VMFGGFTHKPAIELCQKLVKM----TPNALDCVFLADSGSV 116 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCC--ccccccCCHHHHHHHHHHHhh----CCCCCCEEEEeCCcHH
Confidence 356788887764 2124678999999998876431 111111222333444444443 2333469999999999
Q ss_pred HHHH-HHH---hc----CC-CCEEEEeCCCchhhHhHHHHh-cccccccc-ccCccceeEEeecCCC-C--Cc----cCC
Q 013521 147 DISR-LQM---LL----GS-NVTVAVQDPSFPAYIDTSVIV-GQAGKFLK-ETGKYRNIVYMNCRPE-N--NF----FPD 208 (441)
Q Consensus 147 al~~-l~~---l~----~~-gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~-~~~~~~~v~~v~~~~~-~--~~----~~~ 208 (441)
++.. +.. .. .+ ..+|+...-+|++....+... +....... .......+..++.... . .+ ..+
T Consensus 117 A~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 196 (427)
T TIGR00508 117 AVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITP 196 (427)
T ss_pred HHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHH
Confidence 8875 421 11 12 367999999999865433332 21100000 0000001111211000 0 00 011
Q ss_pred CC----C-CCCccEEEEcCC--CCcccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEE
Q 013521 209 LS----T-TSRTDIIFFCSP--NNPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIE 280 (441)
Q Consensus 209 ~~----~-~~~~~~v~i~~p--~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 280 (441)
++ . .++..+|+ ..| +.--|. ..+.+.+++|.++|++||+++|+||++..+...+.......++-.+| |+
T Consensus 197 l~~~l~~~~~~vaavi-vEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD--i~ 273 (427)
T TIGR00508 197 LAKLMELHSDEIAAVI-LEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD--IL 273 (427)
T ss_pred HHHHHHhcCCcEEEEE-EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC--EE
Confidence 11 1 13454544 555 555565 45799999999999999999999999976544332212212221344 33
Q ss_pred EecCCcccCCccc-eeEEEEeeccccccCCchhHHHHHHH-----HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 013521 281 ISSFSKFAGFTGV-RLGWTVVPEELRYSNGYPVIKDFNRI-----VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYY 354 (441)
Q Consensus 281 i~S~SK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 354 (441)
+++|.++ .|+ -++.++.++++ .+.+... ....+...++++..++.+.++.-.. +...++.
T Consensus 274 --~~gK~l~-gG~~p~~a~~~~~~~--------~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~~~~~~ 339 (427)
T TIGR00508 274 --CVGKALT-GGYMTLSATVTTDKV--------AQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE---GEWQKQV 339 (427)
T ss_pred --Eechhhh-cCcccceEEEEcHHH--------HHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHH
Confidence 3899996 785 67877777666 2333321 1122233577887777777762111 2335666
Q ss_pred HHHHHHHHHHHHhCCCe-eeCC--CCceEEEEEcCC-CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHH
Q 013521 355 KENAKIIVDAFQSLGLK-VNGG--KNAPYVWVQFPG-SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHRE 428 (441)
Q Consensus 355 ~~~~~~l~~~L~~~g~~-~~~~--~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~ 428 (441)
+++.+++.+.|++++.. .... ..|.++-+.+.. .....+..++++ +||.+.+.. +.+|++- ..+++
T Consensus 340 ~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~-~Gv~~~~~~-------~~l~~~ppl~~t~~ 411 (427)
T TIGR00508 340 SAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVE-QGVWIRPFG-------KLIYVMPPYIITTE 411 (427)
T ss_pred HHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHHH-CCeEEEecC-------CEEEEECCCCCCHH
Confidence 66777777777665211 1111 136666666642 234456666655 599997631 3689874 46899
Q ss_pred HHHHHHHHHHhhC
Q 013521 429 YISEACRRLKNFL 441 (441)
Q Consensus 429 ~~~~~l~~l~~~l 441 (441)
++++++++|.+++
T Consensus 412 ~id~~~~~l~~~l 424 (427)
T TIGR00508 412 QLQKLTAALIEAL 424 (427)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998864
No 328
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.54 E-value=2.1e-12 Score=121.41 Aligned_cols=214 Identities=18% Similarity=0.180 Sum_probs=143.2
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccce
Q 013521 115 GNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRN 193 (441)
Q Consensus 115 g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 193 (441)
-...+.+.+++.. .....++++.++.|+.. +..++.+|+.|++....|.+...+++....+.. ++
T Consensus 78 t~~~le~~iaal~------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~g--------ie 143 (409)
T KOG0053|consen 78 TRDVLESGIAALE------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFG--------GE 143 (409)
T ss_pred chHHHHHHHHHHh------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhC--------ce
Confidence 3455666666653 23457777777777765 788899999999999999998777776654321 46
Q ss_pred eEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC
Q 013521 194 IVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG 273 (441)
Q Consensus 194 v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~ 273 (441)
...++.++-.++.... .+++++|++-+|.||+..+.+ +++|.++|+++|++||+|+.++....-. |.+ +
T Consensus 144 ~~~vd~~~~~~~~~~i--~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~~-pL~---l-- 212 (409)
T KOG0053|consen 144 GDFVDVDDLKKILKAI--KENTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQD-PLP---L-- 212 (409)
T ss_pred eeeechhhHHHHHHhh--ccCceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccccC-hhh---c--
Confidence 6666554332221111 257999999999999999988 8899999999999999999998642221 222 2
Q ss_pred CcceeEEEecCCcccCCcc-ceeEEEEee-ccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHH
Q 013521 274 AREVAIEISSFSKFAGFTG-VRLGWTVVP-EELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVI 351 (441)
Q Consensus 274 ~~~~~i~i~S~SK~~~~~G-~r~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 351 (441)
+-.|++.|.+|.+|-.+ +=.|.++.+ .++ ..++...+.......+++.. ++..++.+.+.-+.
T Consensus 213 --GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~--------~~~l~~~~~~lg~~~~p~~~-----~ll~Rglktl~lRi 277 (409)
T KOG0053|consen 213 --GADIVVHSATKYIGGHSDVIGGSVVLNSEEL--------ASRLKFLQEDLGWCEDPFDL-----FLLSRGLKTLHLRI 277 (409)
T ss_pred --CCCEEEEeeeeeecCCcceeeeEEecCcHHH--------HHHHHHHHHHhcCCCCHHHH-----HHHhcCcchhhhhH
Confidence 12399999999997322 224676665 333 45666666666666666653 22224554455556
Q ss_pred HHHHHHHHHHHHHHHhC
Q 013521 352 DYYKENAKIIVDAFQSL 368 (441)
Q Consensus 352 ~~~~~~~~~l~~~L~~~ 368 (441)
++..++...+.+.|++.
T Consensus 278 ~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 278 NKHSENALKIALLLEAH 294 (409)
T ss_pred HHHHHHHHHHHHHhhhC
Confidence 66667766777777765
No 329
>PRK15029 arginine decarboxylase; Provisional
Probab=99.54 E-value=2.7e-12 Score=132.14 Aligned_cols=170 Identities=13% Similarity=0.150 Sum_probs=114.5
Q ss_pred CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCc
Q 013521 112 AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGK 190 (441)
Q Consensus 112 ~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~ 190 (441)
.+.|...--+.+|+.+ +|.+ .-.++|||+|.++.+ +++++++||.|+++..+|-++...+.+.|.
T Consensus 202 ~p~G~I~eAq~~aA~~---fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga---------- 267 (755)
T PRK15029 202 DHTGAFGESEKYAARV---FGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGA---------- 267 (755)
T ss_pred CCCcHHHHHHHHHHHH---hCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCC----------
Confidence 4445544444444443 3643 688899999999887 788999999999999999999999999994
Q ss_pred cceeEEeecCC-CCCccCC--------------CCCCC--------CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcC
Q 013521 191 YRNIVYMNCRP-ENNFFPD--------------LSTTS--------RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANG 247 (441)
Q Consensus 191 ~~~v~~v~~~~-~~~~~~~--------------~~~~~--------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~ 247 (441)
.+++++... +.++... +...+ +++++++++|++ -|.+++ +++|++.|++++
T Consensus 268 --~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~ 341 (755)
T PRK15029 268 --KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTS 341 (755)
T ss_pred --eEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcC
Confidence 566654332 1111111 11122 344899999977 799998 889999999999
Q ss_pred cEEEEcccccc-cccCCC-CC-ccccc---CCCcceeEEEecCCcccCCcccee-EEEEeecc
Q 013521 248 SIIVYDSAYAA-YITDPS-PR-SIYEI---PGAREVAIEISSFSKFAGFTGVRL-GWTVVPEE 303 (441)
Q Consensus 248 ~~ii~De~~~~-~~~~~~-~~-~~~~~---~~~~~~~i~i~S~SK~~~~~G~r~-G~l~~~~~ 303 (441)
+++++||+|+. |.|.+. |. +.... ......++++.|.+|++ |++.- +++.....
T Consensus 342 ~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~ 402 (755)
T PRK15029 342 DRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREG 402 (755)
T ss_pred CeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCC
Confidence 99999999986 334432 21 22210 10111248999999998 45554 46666443
No 330
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.54 E-value=7.9e-12 Score=124.38 Aligned_cols=340 Identities=13% Similarity=0.074 Sum_probs=192.8
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|- ..+ ..+|.+.+++.+.+.+... .....|. .+.+..+|+.+....+...+.+++++++++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~-~~~~~~~-----~~~~~~lae~L~~~~p~~~~~v~f~~sGsE 118 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEH-VILAGFS-----HEPVIELSERLVKITPPGLSRCFYADNGSS 118 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCC-ccccccC-----CHHHHHHHHHHHHhCCCCcCEEEEeCCcHH
Confidence 356788887663 222 3578899999998876421 0111221 233444555554322333469999999999
Q ss_pred HHHH-HHHh--c----C-C-CCEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCCCc--c--------
Q 013521 147 DISR-LQML--L----G-S-NVTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPENNF--F-------- 206 (441)
Q Consensus 147 al~~-l~~l--~----~-~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~~~--~-------- 206 (441)
|... +... . . + ..+|+...-+|++....+...+....+.. .......+..+|....... .
T Consensus 119 Ave~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~ 198 (466)
T PRK07030 119 AIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSR 198 (466)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHH
Confidence 9886 4211 1 1 2 35788899999997544433322110000 0000012223332110000 0
Q ss_pred ---CCCC----C-CCCccEEEEcCC--CCcccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCc
Q 013521 207 ---PDLS----T-TSRTDIIFFCSP--NNPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275 (441)
Q Consensus 207 ---~~~~----~-~~~~~~v~i~~p--~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~ 275 (441)
.+++ . .+++.+|+ ..| +.-.|. ..|++.+++|.++|++||+++|.||+...|...+.......+.-.|
T Consensus 199 ~~l~~le~~~~~~~~~iAAvi-~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~P 277 (466)
T PRK07030 199 RMFAHMEQTLAEHHDEIAAVI-VEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRP 277 (466)
T ss_pred HHHHHHHHHHHhCCCceEEEE-EecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCC
Confidence 0011 1 24555555 455 555566 4678999999999999999999999998765443322222222235
Q ss_pred ceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH-------HHhhhcCCCcHHHHHHHHHhcCCCcHHHH
Q 013521 276 EVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR-------IVCTCFNGASNIVQAGGLACLSPDGFQAL 347 (441)
Q Consensus 276 ~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 347 (441)
| +-+++|.++ .| +.+|.+++++++. +.+.. .....+++.++++..++.+.|+.-..
T Consensus 278 D----iv~~gKgl~-gG~~Pi~av~~~~ei~--------~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~--- 341 (466)
T PRK07030 278 D----FLCLSKALT-GGYLPLAAVLTTDTVY--------QAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ--- 341 (466)
T ss_pred C----EEeeehhcc-CCcccceEEEecHHHH--------HHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh---
Confidence 5 334799998 89 5999999988873 33321 11223444688888888888762111
Q ss_pred HHHHHHHHHHHHHHHHHHHhC---C-CeeeCCCCceEEEEEcCC-CC-------h----HHHHHHHHHhcCeEEeCCCCc
Q 013521 348 RTVIDYYKENAKIIVDAFQSL---G-LKVNGGKNAPYVWVQFPG-SS-------S----WDVFAEILEKTHILTIPGSGF 411 (441)
Q Consensus 348 ~~~~~~~~~~~~~l~~~L~~~---g-~~~~~~~~~~~~~~~~~~-~~-------~----~~~~~~ll~~~gi~v~pg~~f 411 (441)
+++.++.++.-+++.+.|+++ . +.-.. .-|.++-+++.. .. . ..+...+++ +|+.+.+.
T Consensus 342 ~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~--- 416 (466)
T PRK07030 342 DNVIENNRALARRMAEATAHLADHPHVAEVR-QTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALE-RGALLRPL--- 416 (466)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeE-eceeEEEEEeccCccccccCcchhHHHHHHHHHHHH-CCeEEEec---
Confidence 234455555556666665543 2 21122 246666666631 10 1 234455554 59999762
Q ss_pred CCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 412 GPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 412 ~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.+.+|+. +..+++++++++++|.+++
T Consensus 417 ----g~~i~~~Ppl~it~~eid~~~~~l~~al 444 (466)
T PRK07030 417 ----GSVVYFLPPYVITPEQIDFLAEVASEGI 444 (466)
T ss_pred ----CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 1468886 4668999999999998864
No 331
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.54 E-value=3e-14 Score=136.66 Aligned_cols=171 Identities=19% Similarity=0.252 Sum_probs=113.2
Q ss_pred CCcCc-HHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccC
Q 013521 112 AEQGN-MALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETG 189 (441)
Q Consensus 112 ~~~g~-~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 189 (441)
.+.|. .+..+..|+.+ |. .+..++|+|+|.++.+ ++++++|||.|+++..+|-++...+.+.|
T Consensus 63 ~p~G~I~eAe~~aA~~f----GA-d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~g---------- 127 (417)
T PF01276_consen 63 DPEGIIKEAEELAARAF----GA-DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSG---------- 127 (417)
T ss_dssp TTBTHHHHHHHHHHHHH----TE-SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHT----------
T ss_pred CCccHHHHHHHHHHHhc----CC-CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcC----------
Confidence 34444 44444555544 53 3578899999999987 78999999999999999999999999999
Q ss_pred ccceeEEeecCCC-CCc----cC-----C-----CCCCCCcc---EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEE
Q 013521 190 KYRNIVYMNCRPE-NNF----FP-----D-----LSTTSRTD---IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIV 251 (441)
Q Consensus 190 ~~~~v~~v~~~~~-~~~----~~-----~-----~~~~~~~~---~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii 251 (441)
+.+++++...+ .++ .+ + +.+.+..+ +++|++|++ -|.+++ +++|+++|++++++|+
T Consensus 128 --a~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~ll 201 (417)
T PF01276_consen 128 --AIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLL 201 (417)
T ss_dssp --EEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEE
T ss_pred --CeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEE
Confidence 56777666421 111 11 0 11124444 499999977 799999 8999999999999999
Q ss_pred Ecccccc-cccCCCCCcccccCC---CcceeEEEecCCcccCCccceeEEEEeeccc
Q 013521 252 YDSAYAA-YITDPSPRSIYEIPG---AREVAIEISSFSKFAGFTGVRLGWTVVPEEL 304 (441)
Q Consensus 252 ~De~~~~-~~~~~~~~~~~~~~~---~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~ 304 (441)
+||+|+. +.|.+-|.+...+.. ....++++.|.+|+++ +=...+++..+.+.
T Consensus 202 vDEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL~-altQts~lh~~~~~ 257 (417)
T PF01276_consen 202 VDEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTLP-ALTQTSMLHVKGDR 257 (417)
T ss_dssp EE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHSS-S-TT-EEEEEETCC
T ss_pred EEccccccccCCCCccchhhccCccccccceeeeechhhccc-ccccceEEEecCCC
Confidence 9999986 334432333333311 1346799999999984 33345677777764
No 332
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.54 E-value=1e-11 Score=123.47 Aligned_cols=340 Identities=11% Similarity=0.078 Sum_probs=189.9
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCC-----CCCcEEEc
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI-----EGDEIFIS 141 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~-----~~~~I~~t 141 (441)
.++.++|+..|. ..+ ..+|.+.+++.+.+.++.. .....+. .+.+..+|+.+....+. +.+.++++
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~-~~~~~~~-----~~~~~~lae~L~~~~p~~~~~~~~~~v~f~ 135 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQ-VMLAGFT-----HEPAVQLAEQLLAIAPRQDGRAPLSKVFYA 135 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCC-ccccccC-----CHHHHHHHHHHHHhCCCcccCCCCCEEEEe
Confidence 456789987663 222 3678899999998875431 1111222 23345555555432221 23689999
Q ss_pred CCcHHHHHH-HH--Hhc----C-C-CCEEEEeCCCchhhHhHHHHhccccccccc-cCccceeEEeecCCCCCc--c---
Q 013521 142 DGAQSDISR-LQ--MLL----G-S-NVTVAVQDPSFPAYIDTSVIVGQAGKFLKE-TGKYRNIVYMNCRPENNF--F--- 206 (441)
Q Consensus 142 ~G~~~al~~-l~--~l~----~-~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~v~~v~~~~~~~~--~--- 206 (441)
+++++|... +. ... + + ..+|+....+|++....+............ ......+..+|....... .
T Consensus 136 ~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~ 215 (472)
T PRK08742 136 DNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSA 215 (472)
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCH
Confidence 999999885 42 112 1 2 368999999999975444433211100000 000011223332110000 0
Q ss_pred --------CCCC----C-CCCccEEEEcCC--CCcccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccc
Q 013521 207 --------PDLS----T-TSRTDIIFFCSP--NNPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYE 270 (441)
Q Consensus 207 --------~~~~----~-~~~~~~v~i~~p--~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~ 270 (441)
..++ . ..++.+|+ ..| +.-.|. ..|++.++++.++|++||+++|.||+...|...+.......
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~~iAAvI-~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~ 294 (472)
T PRK08742 216 EDYALQAADALQALFEQSPGEICALI-LEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQ 294 (472)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEE-EccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHh
Confidence 0001 1 13555555 466 566676 56899999999999999999999999987755443222222
Q ss_pred cCCCcceeEEEecCCcccCCccc-eeEEEEeeccccccCCchhHHHHHH------HHhhhcCCCcHHHHHHHHHhcCCCc
Q 013521 271 IPGAREVAIEISSFSKFAGFTGV-RLGWTVVPEELRYSNGYPVIKDFNR------IVCTCFNGASNIVQAGGLACLSPDG 343 (441)
Q Consensus 271 ~~~~~~~~i~i~S~SK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~ 343 (441)
+.-.|| |-+++|.++ .|+ .+|.+++++++. +.+.. .....+++.++++..++.+.|+--.
T Consensus 295 ~gv~PD----iv~~gKgl~-gG~~Plaav~~~~ei~--------~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~ 361 (472)
T PRK08742 295 AGVMPD----LLCLSKGLT-GGFLPLSAVLATQQLY--------DAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFA 361 (472)
T ss_pred cCCCCC----EEEEccccc-CCCCCcceeeccHHHH--------HHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHH
Confidence 222355 334799998 884 899999988773 33321 1122334467888888888776211
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHhCCC-eeeCCCCceEEEEEcCC-CC-------h----HHHHHHHHHhcCeEEeC
Q 013521 344 FQALRTVIDYYKENAKIIVD---AFQSLGL-KVNGGKNAPYVWVQFPG-SS-------S----WDVFAEILEKTHILTIP 407 (441)
Q Consensus 344 ~~~~~~~~~~~~~~~~~l~~---~L~~~g~-~~~~~~~~~~~~~~~~~-~~-------~----~~~~~~ll~~~gi~v~p 407 (441)
. +++.+..++.-+++.+ .+.++.+ .-.. .-|.++-+++.. .. + ..+...++ ++||.+.+
T Consensus 362 ~---~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvR-G~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~ 436 (472)
T PRK08742 362 D---DDVIARNQPTAARMTQLAAQIGEHPHVADVR-QAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAAL-ARGVVLRP 436 (472)
T ss_pred H---CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEe-ccceEEEEEeccCccccccCCchhHHHHHHHHHHH-HCCeEEEe
Confidence 1 1222222333333333 3333432 1122 256666666631 10 1 23445555 45999976
Q ss_pred CCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 408 GSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 408 g~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
. + +.|||. +..+++++++++++|.++|
T Consensus 437 ~------g-~vi~~~PpL~it~~ei~~~~~~l~~~l 465 (472)
T PRK08742 437 L------G-DVLYWMPPYCVDEAQLALLADTTRHAI 465 (472)
T ss_pred c------C-CEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 2 1 579998 5568999999999998864
No 333
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.54 E-value=4.9e-12 Score=121.55 Aligned_cols=309 Identities=12% Similarity=0.092 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCC--cEEEcCCcHHHHHH-HHHhc-CCCCEEEE
Q 013521 88 DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD--EIFISDGAQSDISR-LQMLL-GSNVTVAV 163 (441)
Q Consensus 88 ~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~--~I~~t~G~~~al~~-l~~l~-~~gd~Vlv 163 (441)
...++++.+.+.. ..++ ++...++-+.+.+.|.+.++.+.+ -++++.+++.+++. +.+++ ++|+.|++
T Consensus 17 ~~~~~~~~~~~~~------~~HR--s~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv 88 (374)
T TIGR01365 17 GWSIEELKNAPLG------RSHR--SKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLA 88 (374)
T ss_pred hhhHHHHhhhhcc------cCcC--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEE
Confidence 3356666664432 2234 234455655566666655666433 35678889999997 78888 58988887
Q ss_pred eCCCchhh--H-hHHHHhccccccccccCccc-eeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHH
Q 013521 164 QDPSFPAY--I-DTSVIVGQAGKFLKETGKYR-NIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKL 239 (441)
Q Consensus 164 ~~p~y~~~--~-~~~~~~g~~~~~~~~~~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i 239 (441)
.. +++- . ++++..| + ++..+.......+.+ ++....+.|++++....||+..|. +++
T Consensus 89 ~g--~FG~r~~~eia~~~g------------~~~v~~l~~~~g~~~~~--~~ve~~~~v~~vhnETSTGv~npv---~~i 149 (374)
T TIGR01365 89 WE--SFGKGWVTDVTKQLK------------LPDVRVLEAEYGKLPDL--KKVDFKNDVVFTWNGTTSGVRVPN---GDF 149 (374)
T ss_pred EC--HHHHHHHHHHHHhcC------------CCCcEEEcCCCCCCCCH--HHcCCCCCEEEecCCCchheeccc---ccc
Confidence 54 4443 3 5666677 3 355555544333322 221111336677888899999994 454
Q ss_pred HHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCc-----hhHH
Q 013521 240 VEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY-----PVIK 314 (441)
Q Consensus 240 ~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~-----~~~~ 314 (441)
+..+ ++.++|+|.+-+- . +.+..+- +..+++.|..|.+++|+ .+++++++++.+..... ....
T Consensus 150 ~~~~--~~~lliVDavSs~-g--~~~l~~d------~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~ 217 (374)
T TIGR01365 150 IPAD--REGLTICDATSAA-F--AQDLDYH------KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPK 217 (374)
T ss_pred cccc--CCCcEEEEccchh-c--CCCCChh------HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChh
Confidence 4221 5899999998773 2 2233222 24488999999998644 58889988888633110 0001
Q ss_pred HHH---------HHH-hhhcCCCcHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHHHHHHHHHhCC-CeeeCC----CCc
Q 013521 315 DFN---------RIV-CTCFNGASNIVQAGGLACLSPDGFQ-ALRTVIDYYKENAKIIVDAFQSLG-LKVNGG----KNA 378 (441)
Q Consensus 315 ~~~---------~~~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~----~~~ 378 (441)
.+. ... ..+.++++.....++..+++.-..+ .++.+.++++++++.+++.++++| +.+... .+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~ 297 (374)
T TIGR01365 218 IFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSN 297 (374)
T ss_pred hhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCC
Confidence 000 011 2233444555555555555310011 358899999999999999999998 666542 122
Q ss_pred eEEEEEcCC--C-----C-----hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe-e-cCHHHHHHHHHHHH
Q 013521 379 PYVWVQFPG--S-----S-----SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA-F-GHREYISEACRRLK 438 (441)
Q Consensus 379 ~~~~~~~~~--~-----~-----~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~-~-~~~~~~~~~l~~l~ 438 (441)
..+.+.++. . + ..++ ...++++||.+.+|.. ...+..+||+. + .+.++++.++..|.
T Consensus 298 tvt~v~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gi~i~~G~~--~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 298 TSVCLKVVDPAIDALDEDAQADFAKEL-ISTLEKEGVAYDIGSY--RDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred CeEEEEeCCccccccccchhhHHHHHH-HHHHHHCCEEEecccc--ccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 235556642 2 1 3444 4445566999998763 33357899995 3 38899999998874
No 334
>PRK07481 hypothetical protein; Provisional
Probab=99.53 E-value=1.3e-11 Score=122.56 Aligned_cols=341 Identities=13% Similarity=0.096 Sum_probs=190.3
Q ss_pred CCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCC-CCCCcEEEcCCcHH
Q 013521 71 DARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMG-IEGDEIFISDGAQS 146 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~-~~~~~I~~t~G~~~ 146 (441)
++..+|+..|- ..+ ..+|.+.+++.+.+.+.........+ ..+.+..+|+.+.+..+ -..+.+++++++++
T Consensus 41 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsE 115 (449)
T PRK07481 41 GKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGT-----THPRAIELSYELIDMFAPEGMRRVFFSSGGSD 115 (449)
T ss_pred CCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceeccccc-----CCHHHHHHHHHHHHhcCCCCCCEEEEcCchHH
Confidence 45678876552 222 35788999999988753210001112 12344555555544232 12468999999999
Q ss_pred HHHH-HH--H-hc---C-CC-CEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCC--Ccc-CCC----
Q 013521 147 DISR-LQ--M-LL---G-SN-VTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPEN--NFF-PDL---- 209 (441)
Q Consensus 147 al~~-l~--~-l~---~-~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~--~~~-~~~---- 209 (441)
|+.. +. . .. + +| .+|+...-+|++....+........+.. .......+..++..... .+. .+.
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~ 195 (449)
T PRK07481 116 SVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELA 195 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHH
Confidence 9886 42 1 11 1 23 5789999999996543333221110000 00000112222221100 000 010
Q ss_pred -------C-----C-CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCC
Q 013521 210 -------S-----T-TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGA 274 (441)
Q Consensus 210 -------~-----~-~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~ 274 (441)
+ . .+++.+|++ .| +.-.|.. .+.+.++++.++|++||+++|.||+...|...+.......+.-.
T Consensus 196 ~~~~~~le~~i~~~~~~~iAAvii-EPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~ 274 (449)
T PRK07481 196 RICARLLEREIAFQGPDTIAAFIA-EPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVK 274 (449)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEE-ecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCC
Confidence 0 1 134556554 66 5555764 57888999999999999999999999876443321111122223
Q ss_pred cceeEEEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH-------HHhhhcCCCcHHHHHHHHHhcCCCcHHH
Q 013521 275 REVAIEISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR-------IVCTCFNGASNIVQAGGLACLSPDGFQA 346 (441)
Q Consensus 275 ~~~~i~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 346 (441)
|| |-+++|.++ .| +.+|.+++++++. +.+.. .....+++.++++..++.+.|+.-..
T Consensus 275 PD----iv~~gKgl~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~-- 339 (449)
T PRK07481 275 PD----IMCLAKGIT-SGYVPLGATMVNARIA--------DAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR-- 339 (449)
T ss_pred CC----EEEEeeccc-CCCcCceEEEEcHHHH--------HHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh--
Confidence 55 334799998 78 5899999988763 33321 11223444678888888887762111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCceEEEEEcCCC-------C-----hHHHHHHHHHhcCeEEeCCCC
Q 013521 347 LRTVIDYYKENAKIIVDAFQSL----GLKVNGGKNAPYVWVQFPGS-------S-----SWDVFAEILEKTHILTIPGSG 410 (441)
Q Consensus 347 ~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~ll~~~gi~v~pg~~ 410 (441)
++..++.++.-+.+.+.|+++ ++....-.-|.++.+++... + ...+...++ ++||.+.+..
T Consensus 340 -~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g- 416 (449)
T PRK07481 340 -EDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAR-ENGVLVRPSG- 416 (449)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHH-hCCeEEEecC-
Confidence 334455555666666666553 32211112466666666311 1 123444444 4699997731
Q ss_pred cCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 411 FGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 411 f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+.+||+ +..+++++++++++|.+++
T Consensus 417 ------~~i~l~Ppl~it~~eid~~~~~l~~~l 443 (449)
T PRK07481 417 ------TKIILSPPLVIQREDVDRIVDALDAGL 443 (449)
T ss_pred ------CEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 248888 5568999999999998764
No 335
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=3.6e-12 Score=125.45 Aligned_cols=337 Identities=11% Similarity=0.079 Sum_probs=190.3
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|.. .+ ..+|.+.+++.+.+.+... .....+ .. +.+..+|+.+.+..+-..+.+++++++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~-~~~~~~-~~----~~~~~lae~L~~~~p~~~~~v~f~~SGse 111 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSH-VMFGGL-TH----EPAIKLTRKLLNLTDNGLDHVFYSDSGSV 111 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCC-cccCCc-CC----HHHHHHHHHHHhhCCCCcCEEEEeCCcHH
Confidence 3567888866632 22 3678999999999876431 011111 12 23344444443322323468999999999
Q ss_pred HHHH-HH--HhcC-----C-CCEEEEeCCCchhhHhHHHHh-cccc----ccccccCccceeEEeecCCCCCcc-CC---
Q 013521 147 DISR-LQ--MLLG-----S-NVTVAVQDPSFPAYIDTSVIV-GQAG----KFLKETGKYRNIVYMNCRPENNFF-PD--- 208 (441)
Q Consensus 147 al~~-l~--~l~~-----~-gd~Vlv~~p~y~~~~~~~~~~-g~~~----~~~~~~~~~~~v~~v~~~~~~~~~-~~--- 208 (441)
|+.. +. .... + ..+|+....+|++....+... +... .+.+.. ..+..+|........ .+
T Consensus 112 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~ 188 (422)
T PRK05630 112 SVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTL---PEQIFAPAPPVRGSSPQEISE 188 (422)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccC---CCCeEcCCCcccCCChHHHHH
Confidence 9885 42 1121 2 357999999999854333222 2100 000000 112223222110000 00
Q ss_pred ----CCC--CCCccEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeE
Q 013521 209 ----LST--TSRTDIIFFCSP--NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAI 279 (441)
Q Consensus 209 ----~~~--~~~~~~v~i~~p--~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i 279 (441)
++. ..++.+|++ .| +.-.|.. .+.+.+++|.++|++||+++|.||++..+...+.........-.|| |
T Consensus 189 ~~~~~~~~~~~~iAAvi~-EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD--i 265 (422)
T PRK05630 189 YLRSLELLIDETVAAIII-EPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPD--I 265 (422)
T ss_pred HHHHHHHHHhhceEEEEE-echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCC--e
Confidence 111 135666554 55 6666765 5778999999999999999999999976643332211112222344 3
Q ss_pred EEecCCcccCCcc-ceeEEEEeeccccccCCchhHHHHHH------HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHH
Q 013521 280 EISSFSKFAGFTG-VRLGWTVVPEELRYSNGYPVIKDFNR------IVCTCFNGASNIVQAGGLACLSPDGFQALRTVID 352 (441)
Q Consensus 280 ~i~S~SK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 352 (441)
+ +++|.++ .| ..+|.+++++++. +.+.. +....+++.+++...++.+.++.-.. +...+
T Consensus 266 ~--t~gK~l~-gG~~p~~av~~~~~i~--------~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~---~~~~~ 331 (422)
T PRK05630 266 M--CVGKALT-GGFMSFAATLCTDKVA--------QLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET---GMWRK 331 (422)
T ss_pred e--eeechhh-cCccccceeeccHHHH--------HHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh---CcHHH
Confidence 3 7899996 67 4899999988773 33321 11123345677777777777752111 12334
Q ss_pred HHHHHHHHHHHHHHhC----CCeeeCCCCceEEEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eec
Q 013521 353 YYKENAKIIVDAFQSL----GLKVNGGKNAPYVWVQFPGS-SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFG 425 (441)
Q Consensus 353 ~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~ 425 (441)
+.+++.+++.+.|+++ .+.-.. .-|.++-+++... ....+...+++ +|+.+.+. + +.+||. +..
T Consensus 332 ~~~~~g~~l~~~L~~l~~~~~v~~vR-g~Gl~~~ie~~~~~~~~~~~~~~~~-~Gl~~~~~------g-~~l~~~PpL~i 402 (422)
T PRK05630 332 QVKRIEAELIAGLSPLAHLPGVADVR-VLGAIGVVEMEQPVDMEEATQAAVD-HGVWLRPF------G-RLVYVMPPYIT 402 (422)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeeeee-ccccEEEEEECCcccHHHHHHHHHH-CCeEEEec------C-CEEEEECCccC
Confidence 5555555555555533 121111 2477777777532 23455555554 59999762 2 578988 466
Q ss_pred CHHHHHHHHHHHHhhC
Q 013521 426 HREYISEACRRLKNFL 441 (441)
Q Consensus 426 ~~~~~~~~l~~l~~~l 441 (441)
+++++++++++|.+++
T Consensus 403 t~~~i~~~~~~l~~al 418 (422)
T PRK05630 403 TSEQIAQICAALAAAV 418 (422)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8999999999998864
No 336
>PRK07480 putative aminotransferase; Validated
Probab=99.53 E-value=6.4e-12 Score=124.82 Aligned_cols=341 Identities=9% Similarity=0.028 Sum_probs=187.7
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++..+|+..|. ..+ ..+|.+.+++.+.+.+.........+ ..+.+..+|+.+....+...+.+++++++++
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~~v~f~~SGse 122 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKT-----THPPAIELAAKLAEVAPPGFNHVFFTNSGSE 122 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccc-----CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHH
Confidence 456788887663 222 35789999999988764211111122 2344445555554323333469999999999
Q ss_pred HHHH-HH--Hhc----C-C-CCEEEEeCCCchhhHhHHHHhccccccc-cccCccceeEEeecCCC---------CCcc-
Q 013521 147 DISR-LQ--MLL----G-S-NVTVAVQDPSFPAYIDTSVIVGQAGKFL-KETGKYRNIVYMNCRPE---------NNFF- 206 (441)
Q Consensus 147 al~~-l~--~l~----~-~-gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~v~~v~~~~~---------~~~~- 206 (441)
|... +. ... + + ..+|+...-+|++........+...... ........+..++.... ..+.
T Consensus 123 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 202 (456)
T PRK07480 123 ANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGL 202 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHH
Confidence 9886 42 222 1 2 3468888889988643222222110000 00000011222221100 0000
Q ss_pred ---CCCC-----C-CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCc
Q 013521 207 ---PDLS-----T-TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275 (441)
Q Consensus 207 ---~~~~-----~-~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~ 275 (441)
..++ . ..++.+|++ .| +.-.|.. .|.+.+++|.++|++||+++|.||++..|...+.......+.-.|
T Consensus 203 ~~~~~l~~~~~~~~~~~vAAvi~-EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~P 281 (456)
T PRK07480 203 AAARQLEAKILELGADNVAAFIG-EPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKP 281 (456)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEE-ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCC
Confidence 0111 1 135556554 55 5556764 577889999999999999999999998764443222222232234
Q ss_pred ceeEEEecCCcccCCccc-eeEEEEeeccccccCCchhHHHHH----HHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHH
Q 013521 276 EVAIEISSFSKFAGFTGV-RLGWTVVPEELRYSNGYPVIKDFN----RIVCTCFNGASNIVQAGGLACLSPDGFQALRTV 350 (441)
Q Consensus 276 ~~~i~i~S~SK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 350 (441)
| +-+|+|.++ .|+ .+|.+++++++. +.+. ......+++.++++..++.+.|+.-.. +.+
T Consensus 282 D----iv~~gK~l~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~---~~l 345 (456)
T PRK07480 282 D----LMTIAKGLT-SGYIPMGAVGVGDRVA--------EVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD---EGI 345 (456)
T ss_pred C----eeeeehhhc-cCCccceEEEEcHHHH--------HHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh---CCH
Confidence 5 346899998 784 899999987763 3331 112233455788888888888862111 223
Q ss_pred HHHH-HHHHHHHHHHHHh---CCCe-eeCCCCceEEEEEcCCC-------Ch-----HHHHHHHHHhcCeEEeCCCCcCC
Q 013521 351 IDYY-KENAKIIVDAFQS---LGLK-VNGGKNAPYVWVQFPGS-------SS-----WDVFAEILEKTHILTIPGSGFGP 413 (441)
Q Consensus 351 ~~~~-~~~~~~l~~~L~~---~g~~-~~~~~~~~~~~~~~~~~-------~~-----~~~~~~ll~~~gi~v~pg~~f~~ 413 (441)
.++. ++.-+++.+.|++ +++. -.. .-|.++-+++... .. ..+...++ ++||.+.+.
T Consensus 346 ~~~~~~~~g~~l~~~l~~l~~~~~i~~vr-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~----- 418 (456)
T PRK07480 346 VERVRDDTGPYLQKRLRELADHPLVGEVR-GVGLVGAIELVKDKATRERFEAGGGVGTICRDHCF-ANGLIMRAV----- 418 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeeeEE-eecceEEEEEeccccccccCcchhhHHHHHHHHHH-HCCcEEeec-----
Confidence 3334 2344444444443 3321 112 2455666666210 01 12334444 569999652
Q ss_pred CCCCeEEEEe--ecCHHHHHHHHHHHHhhC
Q 013521 414 GGNEHIRVSA--FGHREYISEACRRLKNFL 441 (441)
Q Consensus 414 ~~~~~iRls~--~~~~~~~~~~l~~l~~~l 441 (441)
.+.+||+- ..+++++++++++|.+++
T Consensus 419 --~~~l~~~Ppl~it~~eid~~~~~l~~al 446 (456)
T PRK07480 419 --GDRMIISPPLVITHAEIDELVEKARKAL 446 (456)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 14688884 448999999999998764
No 337
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=2e-13 Score=127.33 Aligned_cols=321 Identities=18% Similarity=0.199 Sum_probs=201.0
Q ss_pred CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEE
Q 013521 84 QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAV 163 (441)
Q Consensus 84 ~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv 163 (441)
.++.+.+.+++...-.... .....-+...-..++.+.+|+|+ + .++.+++.-|-...-..+..+++||..|+.
T Consensus 154 g~ca~~~~~~~~kygl~~c--ss~~e~G~~~~hkelE~l~A~f~----g-~e~a~vF~mGf~TNs~~~p~l~~~gsLIiS 226 (519)
T KOG1357|consen 154 GPCAEASLKSFDKYGLSRC--SSRHEAGTTEEHKELEELVARFL----G-VEDAIVFSMGFATNSMNIPSLLGKGSLIIS 226 (519)
T ss_pred CcCChHHHHHHHHhccccc--ccchhcccHHHHHHHHHHHHHhc----C-CcceEEEeccccccccCcceeecCCcceee
Confidence 4566666666665322111 11111112223455666666664 5 457888888843222236788899999999
Q ss_pred eCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC--------CCC--CccEEEEc-CCCCccccCCC
Q 013521 164 QDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS--------TTS--RTDIIFFC-SPNNPTGHAAT 232 (441)
Q Consensus 164 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~--------~~~--~~~~v~i~-~p~NPtG~~~~ 232 (441)
.+..|.++...++..| +.+.....++..++.--+. ++. --|.+++. .-...-|.+..
T Consensus 227 DelNHaSi~~GaRLSg------------AtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~ 294 (519)
T KOG1357|consen 227 DELNHASLITGARLSG------------ATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD 294 (519)
T ss_pred ccccchheeccccccC------------ceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc
Confidence 9999999998888888 4666666654322111010 011 12333332 32344565555
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC--CcceeEEEecCCcccCCccceeEEEEeeccccccCCc
Q 013521 233 WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY 310 (441)
Q Consensus 233 ~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~--~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~ 310 (441)
+.+++++++++..+++.||+|+--..+........+.+ ..+.+|..++|+|.||.+| ||+.++++++
T Consensus 295 ---Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~li----- 363 (519)
T KOG1357|consen 295 ---LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELI----- 363 (519)
T ss_pred ---cHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcHHHH-----
Confidence 88999999999999999999996554443445555432 2356799999999999888 9999998884
Q ss_pred hhHHHHHHHH---hhhcCCCcHHHHHHHHHhcC----CCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEE
Q 013521 311 PVIKDFNRIV---CTCFNGASNIVQAGGLACLS----PDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWV 383 (441)
Q Consensus 311 ~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 383 (441)
+.+.... ......++++.|.. ...++ +.+...-++..++++++..+++..|...|+-+++..+.+.+.+
T Consensus 364 ---d~lrt~s~~~~yat~~sppvaqq~-~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvpl 439 (519)
T KOG1357|consen 364 ---DYLRTPSPSALYATSLSPPVAQQI-LTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPL 439 (519)
T ss_pred ---hhhccCCCceeecccCChHHHHHH-HHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCccee
Confidence 3222111 11122244555553 33333 2334566788899999999999999999999988777765433
Q ss_pred Ec-CCCChHHHHHHHHHhcCeEEeCCCCc-CCCCCCeEEEEee--cCHHHHHHHHHHHHh
Q 013521 384 QF-PGSSSWDVFAEILEKTHILTIPGSGF-GPGGNEHIRVSAF--GHREYISEACRRLKN 439 (441)
Q Consensus 384 ~~-~~~~~~~~~~~ll~~~gi~v~pg~~f-~~~~~~~iRls~~--~~~~~~~~~l~~l~~ 439 (441)
-+ ....-..+-++++++ +|.+.-+..- .+.-+..+|++.+ ++.|+++.+++.+.+
T Consensus 440 ll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~ 498 (519)
T KOG1357|consen 440 LLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDR 498 (519)
T ss_pred eecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhh
Confidence 33 222344666677766 6766544322 2334677888863 378999999988765
No 338
>PLN02590 probable tyrosine decarboxylase
Probab=99.51 E-value=2.3e-11 Score=121.80 Aligned_cols=330 Identities=13% Similarity=0.062 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCC-------CcEEEcCCcHHHHHH-HHH----hc
Q 013521 88 DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEG-------DEIFISDGAQSDISR-LQM----LL 155 (441)
Q Consensus 88 ~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-------~~I~~t~G~~~al~~-l~~----l~ 155 (441)
..+-+.+..++. .....|...+...++.+.+-+|+.+.++.+. ..=++|+|++++... +.. .+
T Consensus 145 ~~lgd~l~sa~n-----~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~ 219 (539)
T PLN02590 145 GFLGEMLNAGLS-----VVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRIL 219 (539)
T ss_pred HHHHHHHHHhcc-----cccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHH
Confidence 444455555443 2334565667889999999999998777654 235678888877543 321 11
Q ss_pred C-------CCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----------CCCccE
Q 013521 156 G-------SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----------TSRTDI 217 (441)
Q Consensus 156 ~-------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----------~~~~~~ 217 (441)
+ +.-.|++.+.+|.++..++..+|... ..++.||++..+++..+.+. ...+-+
T Consensus 220 ~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~---------~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~ 290 (539)
T PLN02590 220 KKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHE---------ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF 290 (539)
T ss_pred hhhcccCCCCEEEEecCCchHHHHHHHHHcCCCc---------ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEE
Confidence 1 22256667889999999999998411 25788888754344444321 122344
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCcccccCCCcceeEEEecCCcccCCccceeE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP-SPRSIYEIPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
|+-+-....||.+=| +++|.++|++||+|+.+|.+|+.+..-. ....+ +.+.+.-.-+...++|++. ....+|
T Consensus 291 VvaTaGTT~tGaiDp---l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~--~~Gie~ADSit~D~HK~l~-~p~~cg 364 (539)
T PLN02590 291 ICATVGTTSSAAVDP---LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKF--IDGIENADSFNMNAHKWLF-ANQTCS 364 (539)
T ss_pred EEEEeCCCCCcccCC---HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHH--hcCCccCCEEEECchhhcC-cCcCEE
Confidence 444455788998877 8999999999999999999999755321 11111 1122222245667999996 888999
Q ss_pred EEEeeccccccCCchhHHHHHHH-----------HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 013521 297 WTVVPEELRYSNGYPVIKDFNRI-----------VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAF 365 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 365 (441)
.+.+++.............+... ........-.+.....-..|+..+.+.++++.++.-+..+++.+.+
T Consensus 365 ~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l 444 (539)
T PLN02590 365 PLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYV 444 (539)
T ss_pred EEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887642100000000001100 0001111122222223333333445667888888888899999999
Q ss_pred HhC-CCeeeCCCCceEEEEEcCCC--Ch-------HHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec---CHHHHHH
Q 013521 366 QSL-GLKVNGGKNAPYVWVQFPGS--SS-------WDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG---HREYISE 432 (441)
Q Consensus 366 ~~~-g~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~---~~~~~~~ 432 (441)
++. ++++..++.-..+++++.+. .. .++.+++.+...+.+.+. .. .+..++|+++.+ ++++++.
T Consensus 445 ~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t-~~--~g~~~lR~~i~n~~T~~~dv~~ 521 (539)
T PLN02590 445 AQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHT-AL--SGKFVLRFAVGAPLTEEKHVTE 521 (539)
T ss_pred hcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEee-EE--CCEEEEEEEecCCCCCHHHHHH
Confidence 887 78887766666777877421 11 234455554433444332 22 245689999744 6899999
Q ss_pred HHHHHHhh
Q 013521 433 ACRRLKNF 440 (441)
Q Consensus 433 ~l~~l~~~ 440 (441)
+++.|.+.
T Consensus 522 ~~~~i~~~ 529 (539)
T PLN02590 522 AWQIIQKH 529 (539)
T ss_pred HHHHHHHH
Confidence 99998763
No 339
>PRK06149 hypothetical protein; Provisional
Probab=99.50 E-value=2e-11 Score=131.92 Aligned_cols=339 Identities=14% Similarity=0.097 Sum_probs=191.8
Q ss_pred CCCCeEEeCCCCCCCC-CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH
Q 013521 70 PDARLIRLGIGDTTQP-IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI 148 (441)
Q Consensus 70 ~~~~~i~l~~g~~~~~-~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al 148 (441)
.++.++|+..|...+. .+|.+.+++.+.+..... ...|. .....++.+.+++. .+-..+.+++++++++|.
T Consensus 583 dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~---~~~~~-~~~~~elae~L~~~----~p~~~~~v~f~~SGsEA~ 654 (972)
T PRK06149 583 AGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNT---NSRFH-YAAVAEFSERLAAL----APDGLDTVFLVNSGSEAN 654 (972)
T ss_pred CCCEEEECCCCccccCCCCHHHHHHHHHHHHhccc---ccccc-CHHHHHHHHHHHHh----CCCCcCEEEEeCCchHHH
Confidence 3567888886654443 789999999998875421 11221 12233444444443 232346899999999998
Q ss_pred HH-HH--HhcCCCCEEEEeCCCchhhHhHHHHh-cc----ccccccccCccceeEEeecCC--CCCcc---------CC-
Q 013521 149 SR-LQ--MLLGSNVTVAVQDPSFPAYIDTSVIV-GQ----AGKFLKETGKYRNIVYMNCRP--ENNFF---------PD- 208 (441)
Q Consensus 149 ~~-l~--~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~----~~~~~~~~~~~~~v~~v~~~~--~~~~~---------~~- 208 (441)
.. +. ........|+...-+|++....+... +. ....... . ..+..++... ...+. .+
T Consensus 655 e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~-~--~~v~~~~~p~~~~~~~~~~~~~~~~~~~~ 731 (972)
T PRK06149 655 DLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETR-P--DWVHPVESPNTYRGRFRGADSAADYVRDV 731 (972)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCC-C--CCeEEeCCCcccCCcCCCcccHHHHHHHH
Confidence 86 42 22334467888888898754332111 10 0000000 0 0112221110 00010 01
Q ss_pred ---CC----CCCCccEEEEcCC-CCccc-cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCccee
Q 013521 209 ---LS----TTSRTDIIFFCSP-NNPTG-HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVA 278 (441)
Q Consensus 209 ---~~----~~~~~~~v~i~~p-~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~ 278 (441)
++ ...++.+ +|..| +...| ...|++.+++|.++|++||+++|.||++..|...+. ......+.-.+|
T Consensus 732 ~~~l~~~~~~~~~iAa-vI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD-- 808 (972)
T PRK06149 732 VAQLEELDASGRGLAG-FICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPD-- 808 (972)
T ss_pred HHHHHHHhhcCCceEE-EEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCC--
Confidence 11 1134445 44566 33344 557899999999999999999999999976644332 112222222344
Q ss_pred EEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHH-HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Q 013521 279 IEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNR-IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKEN 357 (441)
Q Consensus 279 i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 357 (441)
|+ +++|.+| .|+.+|.+++++++. +.+.. .....+.+.++++..++.+.|+--.. +++.+..++.
T Consensus 809 iv--t~gK~lg-~G~Pl~av~~~~~i~--------~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~---e~l~~~~~~~ 874 (972)
T PRK06149 809 II--TMAKGMG-NGHPLGAVITRREIA--------EALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE---EKLQENARRV 874 (972)
T ss_pred EE--Eeccccc-CCeeeEEEEEcHHHH--------hhhccCCcccCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHH
Confidence 32 7899998 899999999988773 33321 01112235688888888888762111 2344455555
Q ss_pred HHHHHHHHHhC----CCeeeCCCCceEEEEEcCC------CC---hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--
Q 013521 358 AKIIVDAFQSL----GLKVNGGKNAPYVWVQFPG------SS---SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS-- 422 (441)
Q Consensus 358 ~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~------~~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls-- 422 (441)
-+++.+.|+++ ++......-|.++-+++.. .. ...+...+++ +||.+.|.. ...+.+||.
T Consensus 875 G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~-~Gvl~~~~g----~~~~vl~~~Pp 949 (972)
T PRK06149 875 GDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLE-LGVIMQPTG----DHLNILKIKPP 949 (972)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHh-CCeEEeecC----CCCCEEEEECC
Confidence 55566655543 3221111246666666631 01 1234555555 599998742 124679987
Q ss_pred eecCHHHHHHHHHHHHhhC
Q 013521 423 AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 423 ~~~~~~~~~~~l~~l~~~l 441 (441)
+..+++++++++++|.+++
T Consensus 950 l~it~~~id~~~~~l~~~l 968 (972)
T PRK06149 950 LCLDRESADFFVDMLDRVL 968 (972)
T ss_pred CcCCHHHHHHHHHHHHHHH
Confidence 5679999999999998764
No 340
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.50 E-value=5.1e-11 Score=118.47 Aligned_cols=343 Identities=11% Similarity=0.063 Sum_probs=188.5
Q ss_pred CCCCeEEeCCCCC--CC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC-C-CcE-EEcCC
Q 013521 70 PDARLIRLGIGDT--TQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE-G-DEI-FISDG 143 (441)
Q Consensus 70 ~~~~~i~l~~g~~--~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~-~~I-~~t~G 143 (441)
.++.++|+..|.. .+ ..+|.+.+++++.+.+.. .....+ -..+.+..+|+.+....+-. . ..+ +++++
T Consensus 56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~--~~~~~~----~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~S 129 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGL--PLHTLD----LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPS 129 (459)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhc--cccccc----cCCHHHHHHHHHHHHhCCCccccceEEEeCCC
Confidence 4567888877742 22 367889999999886411 000111 12345556666664422211 1 134 55678
Q ss_pred cHHHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCCC--cc-----------
Q 013521 144 AQSDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPENN--FF----------- 206 (441)
Q Consensus 144 ~~~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~~--~~----------- 206 (441)
+++|... + .......+.|+...-+|++....+........... .......+..+|...... +.
T Consensus 130 GsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK06931 130 GADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALT 209 (459)
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHH
Confidence 8888875 4 22334457899999999997655553321110000 000001233333221000 00
Q ss_pred ---CC-CC----CCCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcc
Q 013521 207 ---PD-LS----TTSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGARE 276 (441)
Q Consensus 207 ---~~-~~----~~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~ 276 (441)
.+ ++ ...++.+++ .-| +.-.|.+ .|++.++++.++|++||+++|.||+...|...+.......+.-.||
T Consensus 210 ~~~~~~~~~~~~~~~~iAAvI-~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PD 288 (459)
T PRK06931 210 YYFENFIEDVESGVRKPAAVI-LEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPD 288 (459)
T ss_pred HHHHHHHHhhhcCCCceEEEE-EccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCC
Confidence 00 00 012355544 466 4445654 5799999999999999999999999987754432211112222355
Q ss_pred eeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 013521 277 VAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKE 356 (441)
Q Consensus 277 ~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 356 (441)
|-+++|.++ .|+.+|.++++++. +.+.......+++.++++..++.+.|+.-.. +...++.++
T Consensus 289 ----ivt~gK~l~-gG~Pi~av~~~~~~---------~~~~~~~~~~T~~gnpla~aaala~L~~l~~---~~l~~~~~~ 351 (459)
T PRK06931 289 ----IIVMSKAVG-GGLPLAVLGIKKEF---------DAWQPGGHTGTFRGNQLAMATGLTTLKILKE---ENLAQNAAE 351 (459)
T ss_pred ----EEEeccccc-CCcceeeeeeHHHH---------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHH
Confidence 345799998 88999987776542 1221112233445788888888888762111 223344444
Q ss_pred HHHHHHHHHHh----CCCeeeCCCCceEEEEEcCCC------------C---hHHHHHHHHHhcCeEEeCCCCcCCCCCC
Q 013521 357 NAKIIVDAFQS----LGLKVNGGKNAPYVWVQFPGS------------S---SWDVFAEILEKTHILTIPGSGFGPGGNE 417 (441)
Q Consensus 357 ~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~------------~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~ 417 (441)
.-+++.+.|++ +++....-.-|.++-+++... + ...+...++ ++||.+.+... ..+
T Consensus 352 ~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~----~~~ 426 (459)
T PRK06931 352 RGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLERGGR----NGN 426 (459)
T ss_pred HHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEeecCC----CCC
Confidence 44444444443 333211112466666666311 0 122344444 45999977432 246
Q ss_pred eEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 418 HIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 418 ~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.+|+. +..+++++++++++|.++|
T Consensus 427 ~l~~~Ppl~it~~eid~~~~~l~~~l 452 (459)
T PRK06931 427 VVRLLPPLLITQAECEEFIDRFEQAL 452 (459)
T ss_pred EEEEECCCCcCHHHHHHHHHHHHHHH
Confidence 78877 4568999999999998764
No 341
>PRK12403 putative aminotransferase; Provisional
Probab=99.50 E-value=2e-11 Score=121.45 Aligned_cols=341 Identities=9% Similarity=0.018 Sum_probs=181.3
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
.++.++|+..|- ..+ ..+|.+.+++.+.+.++...... + .+..+....+++.+....+-..+.+++++++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~--~---~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGse 126 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMF--F---HTTHPAVIELSELLFSLLPGHYSHAIYTNSGSE 126 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecc--c---ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHH
Confidence 356788876552 112 26789999999999864311111 1 112233444444443323333478999999999
Q ss_pred HHHH-HHHh--c-----CCCC-EEEEeCCCchhhHhHHHH-hccccccccccCccceeEEeecCCC----CCc-------
Q 013521 147 DISR-LQML--L-----GSNV-TVAVQDPSFPAYIDTSVI-VGQAGKFLKETGKYRNIVYMNCRPE----NNF------- 205 (441)
Q Consensus 147 al~~-l~~l--~-----~~gd-~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~v~~v~~~~~----~~~------- 205 (441)
|... +... . ++++ .|+...-+|++....... .+.... .........+..+|.... .+.
T Consensus 127 A~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (460)
T PRK12403 127 ANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFM-HEMGGLIPDVAHIDEPYWYANGGELTPAEFGR 205 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccc-cccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence 9886 4222 1 2333 455566688875332222 221100 000000001222321100 000
Q ss_pred --cCCCCC------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCc
Q 013521 206 --FPDLST------TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275 (441)
Q Consensus 206 --~~~~~~------~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~ 275 (441)
..++++ ..++.+|+ ..| +.--|.+ .+++.+++|.++|++||+++|.||++..|...+.......+.-.|
T Consensus 206 ~~~~~le~~~~~~~~~~iaavI-~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~P 284 (460)
T PRK12403 206 RAALQLEEKILELGAENVAGFV-AEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEP 284 (460)
T ss_pred HHHHHHHHHHHHhCCCceEEEE-EccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCC
Confidence 001111 13444544 466 5555765 578899999999999999999999998664443221222222234
Q ss_pred ceeEEEecCCcccCCccc-eeEEEEeeccccccCCchhHHHHHH----HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHH
Q 013521 276 EVAIEISSFSKFAGFTGV-RLGWTVVPEELRYSNGYPVIKDFNR----IVCTCFNGASNIVQAGGLACLSPDGFQALRTV 350 (441)
Q Consensus 276 ~~~i~i~S~SK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 350 (441)
| |+ +++|.+| .|. .+|.+++++++. +.+.. .....+.+.++++..++.+.|+.-.. +..
T Consensus 285 D--iv--~~gK~lg-gG~~Piga~v~~~~i~--------~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~---~~l 348 (460)
T PRK12403 285 D--TL--SIAKGLT-SGYVPMGGLVLSKRIA--------EALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRD---EGV 348 (460)
T ss_pred C--eE--EEccccc-ccccceEEEEECHHHH--------HHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccH
Confidence 4 33 4899998 784 899888887762 33321 11223444678888888887762111 123
Q ss_pred HHHHH-HHHHHHHHHHH----hCCCeeeCCCCceEEEEEcCCC-------C-hHH----HHHHHHHhcCeEEeCCCCcCC
Q 013521 351 IDYYK-ENAKIIVDAFQ----SLGLKVNGGKNAPYVWVQFPGS-------S-SWD----VFAEILEKTHILTIPGSGFGP 413 (441)
Q Consensus 351 ~~~~~-~~~~~l~~~L~----~~g~~~~~~~~~~~~~~~~~~~-------~-~~~----~~~~ll~~~gi~v~pg~~f~~ 413 (441)
.+..+ ++-+++.+.|+ ++++.......|.++.+++... . ... +...++ ++|+.+.+.
T Consensus 349 ~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~----- 422 (460)
T PRK12403 349 VTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGF-EEGVIIRST----- 422 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHH-hCCEEEEec-----
Confidence 33442 44444444444 3333221112466666666310 1 011 223334 459999752
Q ss_pred CCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 414 GGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 414 ~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.+.+|++ +..+++++++++++|.++|
T Consensus 423 --~~~~~l~Ppl~it~~eid~~~~~l~~al 450 (460)
T PRK12403 423 --LGRMIMAPALVAGRAEIDELVDKTRIAV 450 (460)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 1347888 3458999999999998764
No 342
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.50 E-value=5e-11 Score=118.61 Aligned_cols=343 Identities=10% Similarity=0.036 Sum_probs=188.9
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC---CCcEEEc-C
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE---GDEIFIS-D 142 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~---~~~I~~t-~ 142 (441)
.++.++|+..|- ..+ ..+|.+.+++++.+.+... .....+ . .+.+..+|+.+....+-. .+.++++ +
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~-~----~~~~~~la~~L~~~~p~~~~~~~~v~f~~~ 134 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELP-LHTLDL-T----TPVKDQFVQDLFASLPEAFAREAKIQFCGP 134 (464)
T ss_pred CCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhc-cccccc-C----CHHHHHHHHHHHHhCcccccccceEEEeCC
Confidence 466788886664 222 3678999999998863211 000112 1 234444555543312211 1356564 6
Q ss_pred CcHHHHHH-H--HHhcCCCCEEEEeCCCchhhHhHHHHhcccccccc-ccCccceeEEeecCCCCC--cc----------
Q 013521 143 GAQSDISR-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLK-ETGKYRNIVYMNCRPENN--FF---------- 206 (441)
Q Consensus 143 G~~~al~~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~v~~v~~~~~~~--~~---------- 206 (441)
++++|... + ........+|+...-+|++....+........... .......+..++...... +.
T Consensus 135 SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 214 (464)
T PRK06938 135 TGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRAN 214 (464)
T ss_pred CcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHH
Confidence 77888775 3 22233446888889999997544443221100000 000001223333321100 00
Q ss_pred CC-CCC----C----CCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCc
Q 013521 207 PD-LST----T----SRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAR 275 (441)
Q Consensus 207 ~~-~~~----~----~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~ 275 (441)
.+ +++ . .++.+|+ ..| +.--|.+ .|.+.++++.++|++||+++|.||+...|...+.......++-.|
T Consensus 215 ~~~l~~~i~~~~~~~~~iAAvI-~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~P 293 (464)
T PRK06938 215 LHYLENLLDDPESGVVLPAAVI-LEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIP 293 (464)
T ss_pred HHHHHHHHHhhccCCCceEEEE-EccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCC
Confidence 00 110 0 1355544 466 4445665 569999999999999999999999998775443211122222235
Q ss_pred ceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 013521 276 EVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYK 355 (441)
Q Consensus 276 ~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 355 (441)
| |-+++|.+| .|+.+|.+++++++ . .+.......+++.++++..++.+.|+.-.. +++.++.+
T Consensus 294 D----iv~~gKglg-gG~PlsAv~~~~~~-~--------~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~---~~l~~~~~ 356 (464)
T PRK06938 294 D----VVVLSKAIG-GSLPLAVVVYREWL-D--------TWQPGAHAGTFRGNQMAMAAGSATLRYIKE---HRLAEHAA 356 (464)
T ss_pred C----EEEeecccc-CCCceEEEeehhHh-h--------ccCCCCCCCCCCcCHHHHHHHHHHHHHHHH---hHHHHHHH
Confidence 5 334799998 89999999987653 1 111111233445788888888888862111 23444555
Q ss_pred HHHHHHHHHHHhC----CCeeeCCCCceEEEEEcCCC------------C---hHHHHHHHHHhcCeEEeCCCCcCCCCC
Q 013521 356 ENAKIIVDAFQSL----GLKVNGGKNAPYVWVQFPGS------------S---SWDVFAEILEKTHILTIPGSGFGPGGN 416 (441)
Q Consensus 356 ~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~------------~---~~~~~~~ll~~~gi~v~pg~~f~~~~~ 416 (441)
+.-+++.+.|+++ ++......-|.++-+++... + ...+...++ ++|+.+.++.. ..
T Consensus 357 ~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g~----~~ 431 (464)
T PRK06938 357 AMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILELGGR----HG 431 (464)
T ss_pred HHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEeecCC----CC
Confidence 5555555555543 32211112466666766311 0 123445555 46999987432 13
Q ss_pred CeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 417 EHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 417 ~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+.||+. +..++++++++++++.+++
T Consensus 432 ~~l~~~Ppl~it~~eid~~~~~l~~~l 458 (464)
T PRK06938 432 SVVRFLPPLIITAEQIDEVAEIFAEAV 458 (464)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 578987 4568999999999998764
No 343
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.49 E-value=8e-12 Score=123.38 Aligned_cols=340 Identities=9% Similarity=0.018 Sum_probs=182.2
Q ss_pred CCCCeEEeCCCCCC--C-CCcHHHHHHHHHH--HhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCc
Q 013521 70 PDARLIRLGIGDTT--Q-PIPDIITSAMAEH--AFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGA 144 (441)
Q Consensus 70 ~~~~~i~l~~g~~~--~-~~~~~~~~al~~~--~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~ 144 (441)
.++.++|+..|-.. + ..+|.+.+++.+. ...+. ....|.. ....++-+.+++.+.+..+-..+.+++++++
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~---~~~~~~~-~~~~~la~~l~~~l~~~~p~~~~~v~f~~SG 131 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLI---NRPALGN-FPSKDWAKILKEGILKVAPKGQDQVWTGMSG 131 (464)
T ss_pred CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhc---ccccCCc-HHHHHHHHHHHHhHHhhCCCCcCEEEEeCCc
Confidence 45678888776432 2 3678999999974 22211 1112321 1223344444432222222233689999999
Q ss_pred HHHHHH-HHHh--c-C-----------------------C---CCEEEEeCCCchhhHhHHHHhccccccccccCcccee
Q 013521 145 QSDISR-LQML--L-G-----------------------S---NVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNI 194 (441)
Q Consensus 145 ~~al~~-l~~l--~-~-----------------------~---gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v 194 (441)
++|+.. +... . . + ...|+....+|++....+..................+
T Consensus 132 sEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~ 211 (464)
T TIGR00699 132 SDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDW 211 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCc
Confidence 999986 4211 1 1 1 1279999999999755444332111000000000111
Q ss_pred EEeecCCC----CCc----------cC-CCC----C-CCCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCcEEEE
Q 013521 195 VYMNCRPE----NNF----------FP-DLS----T-TSRTDIIFFCSP-NNPTGHAA-TWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 195 ~~v~~~~~----~~~----------~~-~~~----~-~~~~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~ 252 (441)
..+|.... ... .. .++ . ..++.+|++ .| +.-.|.+. +++.+++|.++|++||+++|.
T Consensus 212 ~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~-EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~ 290 (464)
T TIGR00699 212 PQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIV-EPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV 290 (464)
T ss_pred eecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEE-eCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 22222110 000 00 011 1 134566554 55 55568766 799999999999999999999
Q ss_pred cccccccccCCCCCcccccCC--CcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHH
Q 013521 253 DSAYAAYITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNI 330 (441)
Q Consensus 253 De~~~~~~~~~~~~~~~~~~~--~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (441)
||++..|...+.......++- .+| +.+++|.+| .| |+++..+ .+ ..........+...+++
T Consensus 291 DEV~tGfGrtG~~fa~e~~gv~~~PD----i~t~gK~lg-~g---G~~~~~~-~~--------~~~~~~~~~~T~~gnp~ 353 (464)
T TIGR00699 291 DEVQTGVGATGKFWAHEHWNLDDPPD----MVTFSKKFQ-TA---GYFFHDP-AF--------RPNKPYRQFNTWMGDPS 353 (464)
T ss_pred eeeeeCCCCCcchhHHHhcCCCCCCC----EEEehhhhc-cC---Cccccch-hc--------cCCCCcccccCCCCCHH
Confidence 999987644332111111211 144 356899985 32 4444332 21 00011112234446777
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC----C--C-eeeCCCCceEEEEEcCCC-ChHHHHHHHHHhcC
Q 013521 331 VQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL----G--L-KVNGGKNAPYVWVQFPGS-SSWDVFAEILEKTH 402 (441)
Q Consensus 331 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g--~-~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~g 402 (441)
+..++.+.|+.-. -+++.++.++.-+++.+.|+++ . + .+.....|.++-++++.. ....+...+++ +|
T Consensus 354 ~~aaa~a~L~~l~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~-~G 429 (464)
T TIGR00699 354 RALILREIIQEIK---RKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARN-NG 429 (464)
T ss_pred HHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHH-CC
Confidence 7777776665211 1233444444455555555543 2 1 111113577777777532 13445566565 59
Q ss_pred eEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 403 ILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 403 i~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+.+.+. +.+.|||. +..+++++++++++|.+++
T Consensus 430 vl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 430 VNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred cEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 999763 34679998 4669999999999999875
No 344
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.48 E-value=3.1e-11 Score=123.10 Aligned_cols=175 Identities=15% Similarity=0.156 Sum_probs=114.3
Q ss_pred CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhH-HHHhcccccc
Q 013521 107 YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDT-SVIVGQAGKF 184 (441)
Q Consensus 107 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~ 184 (441)
+.+...+.|...--+..|+.+ +|.+ .--+++||+|.++.+ +++++.+||.|+++..+|-+..+. ..+.|
T Consensus 166 LddL~~~eG~i~eAq~~AA~~---fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsG----- 236 (720)
T PRK13578 166 LGDLLIHEGAAKDAQKHAAKV---FNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAG----- 236 (720)
T ss_pred CCCCCCCChHHHHHHHHHHHH---hCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcC-----
Confidence 333334555544444444443 3643 578899999999987 788999999999999999999885 77888
Q ss_pred ccccCccceeEEeecCCC-CCc----cCC------C----CCC-C------C-ccEEEEcCCCCccccCCCHHHHHHHHH
Q 013521 185 LKETGKYRNIVYMNCRPE-NNF----FPD------L----STT-S------R-TDIIFFCSPNNPTGHAATWQQLKKLVE 241 (441)
Q Consensus 185 ~~~~~~~~~v~~v~~~~~-~~~----~~~------~----~~~-~------~-~~~v~i~~p~NPtG~~~~~~~~~~i~~ 241 (441)
+.++++....+ .++ .++ + .+. + + .++++|++|++ -|.+++ +++|++
T Consensus 237 -------a~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~ 305 (720)
T PRK13578 237 -------ATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVD 305 (720)
T ss_pred -------CeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHH
Confidence 45666554331 111 110 0 011 1 2 58899988877 799999 778888
Q ss_pred H-HHHcCcEEEEccccccc-ccCC----CCCcccccCCCcceeEEEecCCcccCCccce-eEEEEeeccc
Q 013521 242 F-AKANGSIIVYDSAYAAY-ITDP----SPRSIYEIPGAREVAIEISSFSKFAGFTGVR-LGWTVVPEEL 304 (441)
Q Consensus 242 ~-a~~~~~~ii~De~~~~~-~~~~----~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r-~G~l~~~~~~ 304 (441)
. ++.++ +|++||+|+.+ .|.+ .|.+.......+..++.+.|.+|.++ ++- .+++...++.
T Consensus 306 ~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~--alTQaS~LHvk~~~ 372 (720)
T PRK13578 306 KIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA--GFSQTSQIHKKDNH 372 (720)
T ss_pred HhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcch--hhhhHhhhhcCCcc
Confidence 7 67788 99999999864 3333 12222233222344699999999984 544 4466665543
No 345
>PRK06148 hypothetical protein; Provisional
Probab=99.47 E-value=3.6e-11 Score=130.11 Aligned_cols=338 Identities=12% Similarity=0.045 Sum_probs=192.3
Q ss_pred CCCeEEeCCCCCCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH
Q 013521 71 DARLIRLGIGDTTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDIS 149 (441)
Q Consensus 71 ~~~~i~l~~g~~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~ 149 (441)
++..+|+..|...+ ..+|.+.+++.+.+.+.. ....|. . +....+|+.|....+-..+.+++++++++|..
T Consensus 623 G~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~---~~~~~~-~----~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e 694 (1013)
T PRK06148 623 GRAYLDCFNNVCHVGHAHPRVVAAAARQAARLN---TNTRYL-H----DAIVAYAERLTATLPDGLTVAFFVNSGSEANS 694 (1013)
T ss_pred CCEEEEcccChhhcCCCCHHHHHHHHHHHhhcC---CcCCcC-C----HHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 45677887665333 368999999999887642 112332 2 23344555444323323468899999999988
Q ss_pred H-H--HHhcCCCCEEEEeCCCchhhHhHHHHhcc-c---cccccccCccceeEEeecCC--CCCcc-----------CCC
Q 013521 150 R-L--QMLLGSNVTVAVQDPSFPAYIDTSVIVGQ-A---GKFLKETGKYRNIVYMNCRP--ENNFF-----------PDL 209 (441)
Q Consensus 150 ~-l--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~-~---~~~~~~~~~~~~v~~v~~~~--~~~~~-----------~~~ 209 (441)
. + .........|+...-+|++....+..... . ....... ..+..++... ...+. .++
T Consensus 695 ~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 771 (1013)
T PRK06148 695 LALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRP---DHVEVAEVPDSYRGPERWPDAEHGRRFAESV 771 (1013)
T ss_pred HHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCC---CCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence 6 3 22233456788889999886543322211 0 0000000 0111111100 00000 001
Q ss_pred ----C---C-CCCccEEEEcCC-CCccc-cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCccee
Q 013521 210 ----S---T-TSRTDIIFFCSP-NNPTG-HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVA 278 (441)
Q Consensus 210 ----~---~-~~~~~~v~i~~p-~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~ 278 (441)
+ . ..++.+++ ..| +.--| ...|++.++++.++|++||+++|.||+...|...+. ......+.-.||
T Consensus 772 ~~~i~~~~~~~~~iAAvI-~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PD-- 848 (1013)
T PRK06148 772 AEQIAAMAAKGRGPAFFI-AESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPD-- 848 (1013)
T ss_pred HHHHHhhhccCCceEEEE-EcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcc--
Confidence 1 1 13455544 455 33345 456899999999999999999999999987644332 111222222345
Q ss_pred EEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHH-HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Q 013521 279 IEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRI-VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKEN 357 (441)
Q Consensus 279 i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 357 (441)
|-+++|.+| .|+.+|.+++++++. +.+..- ....+++.++++..++.+.|+.-.. +.+.+..++.
T Consensus 849 --ivt~gK~lg-gG~Plgav~~~~ei~--------~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~---e~l~~~~~~~ 914 (1013)
T PRK06148 849 --IVTMGKPIG-NGHPMGAVVTTREIA--------DSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED---EDLQRNALEI 914 (1013)
T ss_pred --eeeeccccc-CCcceEEEEEcHHHH--------hhccCCCccccCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHH
Confidence 356899998 899999999988773 322211 1123445688888888887762111 2344455555
Q ss_pred HHHHHHHHHhC----CCeeeCCCCceEEEEEcCCC-----C----hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--
Q 013521 358 AKIIVDAFQSL----GLKVNGGKNAPYVWVQFPGS-----S----SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS-- 422 (441)
Q Consensus 358 ~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls-- 422 (441)
-++|.+.|+++ ++......-|.++-+++... . ...+...++ ++||.+.+... ..+.+||.
T Consensus 915 G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g~----~~~vlr~~Pp 989 (1013)
T PRK06148 915 GNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEGP----HDNVLKIRPP 989 (1013)
T ss_pred HHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccCC----CCCEEEEeCC
Confidence 55665555543 32111112466666666411 1 123444545 46999976421 24678888
Q ss_pred eecCHHHHHHHHHHHHhhC
Q 013521 423 AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 423 ~~~~~~~~~~~l~~l~~~l 441 (441)
+..+++++++++++|.+++
T Consensus 990 l~it~~~id~~l~~l~~~l 1008 (1013)
T PRK06148 990 LIFSRADADHLLEVLDDVL 1008 (1013)
T ss_pred ccCCHHHHHHHHHHHHHHH
Confidence 4568999999999998764
No 346
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.45 E-value=9.2e-11 Score=122.73 Aligned_cols=306 Identities=13% Similarity=0.112 Sum_probs=187.0
Q ss_pred CCCCCCC---cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH---HHhc-----CCCCEEEEeCCCchhhHhHH
Q 013521 107 YKGYGAE---QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL---QMLL-----GSNVTVAVQDPSFPAYIDTS 175 (441)
Q Consensus 107 ~~~Y~~~---~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l---~~l~-----~~gd~Vlv~~p~y~~~~~~~ 175 (441)
++-|.|. +|..++...+..|+.+-.|.+.-.+...+|++.-...+ .... ...+.|+++.-.|......+
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa 595 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASA 595 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHH
Confidence 5556654 67888888888888876666644444444454322222 2211 13467999999997777777
Q ss_pred HHhccccccccccCccceeEEeecCCCCCccCC-CCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcE
Q 013521 176 VIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSI 249 (441)
Q Consensus 176 ~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ 249 (441)
...| .+++.++.+.++..+++ ++. ..++++|++++|+| +|.+-+ .+++|+++|+++|.+
T Consensus 596 ~~~G------------~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~ 660 (939)
T TIGR00461 596 AMAG------------MQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQ 660 (939)
T ss_pred HHCC------------CEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCE
Confidence 8888 58999998765544332 211 14888999999999 787753 388999999999999
Q ss_pred EEEcccccc-cccCCCCCcccccCCCcceeEEEecCCcccC----CccceeEEEEeeccccccCCch--hHH--------
Q 013521 250 IVYDSAYAA-YITDPSPRSIYEIPGAREVAIEISSFSKFAG----FTGVRLGWTVVPEELRYSNGYP--VIK-------- 314 (441)
Q Consensus 250 ii~De~~~~-~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~----~~G~r~G~l~~~~~~~~~~~~~--~~~-------- 314 (441)
+++|.++.- ...-..| +..+-++++.|.+|+|+ ..|..+|++.+.+++... .+. +..
T Consensus 661 v~VDgAq~~al~~l~~P-------g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~-lPg~~v~~t~d~~gre 732 (939)
T TIGR00461 661 VYLDGANMNAQVGLTSP-------GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPF-LPKHDVVSMITGIGGS 732 (939)
T ss_pred EEEEecChhhCCCCCCc-------cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhh-cCCCcccccccCCCCc
Confidence 999999853 1111111 12234599999999775 356668999998765311 000 000
Q ss_pred -HHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCce-E--EEEEcC---
Q 013521 315 -DFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGG-KNAP-Y--VWVQFP--- 386 (441)
Q Consensus 315 -~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~-~--~~~~~~--- 386 (441)
.+.. .+....+ +......+...+...+.+.+++..+..-.+.+++.+.|++ ++++.-+ ..+. + +.++++
T Consensus 733 q~Iga-~s~~~~g-~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~ 809 (939)
T TIGR00461 733 KSIGS-VSAAPYG-SASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLK 809 (939)
T ss_pred ccccc-ccccccC-cHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchh
Confidence 0010 1111111 1122222333333345566778888888899999999987 4444322 2233 2 455654
Q ss_pred ---CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHHHHHhh
Q 013521 387 ---GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACRRLKNF 440 (441)
Q Consensus 387 ---~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~~l~~~ 440 (441)
+....++.++|++. |+.-..- .|-..+.=.||.+-..++++++++++.|.++
T Consensus 810 ~~~g~~~~dIakrL~d~-G~hapt~-~~pv~g~lmiepTE~eskeelD~f~~al~~I 864 (939)
T TIGR00461 810 AKTGIEAIDVAKRLQDY-GFHAPTL-SFPVPGTLMVEPTESESLEELDRFCDAMIAI 864 (939)
T ss_pred hhcCCCHHHHHHHHHhC-Ceecccc-CCccCCeEEEEeeccCCHHHHHHHHHHHHHH
Confidence 24567888888876 9875432 2332222245555566889999999988654
No 347
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.44 E-value=5.1e-14 Score=130.65 Aligned_cols=256 Identities=16% Similarity=0.169 Sum_probs=154.6
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEe
Q 013521 86 IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQ 164 (441)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~ 164 (441)
+.+.+.++|.++.. .. -.|+.+....+|.+.+++.+ +. +..+++++++.+-.+ +..+++|++.|++.
T Consensus 7 ~~~~m~~a~~~a~~-----gd-~~Yg~D~~~~~l~~~i~~l~----g~--e~a~f~~sGT~An~~al~~~~~~~~~vi~~ 74 (290)
T PF01212_consen 7 PTPAMLEAMAAANV-----GD-DAYGEDPTTARLEERIAELF----GK--EAALFVPSGTMANQLALRAHLRPGESVICA 74 (290)
T ss_dssp S-HHEEHHHHHTTS-----B--CCTTSSHHHHHHHHHHHHHH----TS--SEEEEESSHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCHHHHHHHHcccc-----CC-cccCCChhHHHHHHHHHHHc----CC--CEEEEeCCCChHHHHHHHHHHhcCCceecc
Confidence 45777888855332 22 26988889999999999987 43 455677777777776 77778999999999
Q ss_pred CCCchhhHhHH---HHhccccccccccCccceeEEeecCCCCCccCC-CCC--------CCCccEEEEcCCCCcc-ccCC
Q 013521 165 DPSFPAYIDTS---VIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST--------TSRTDIIFFCSPNNPT-GHAA 231 (441)
Q Consensus 165 ~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~--------~~~~~~v~i~~p~NPt-G~~~ 231 (441)
.++|-...+.- ...| .+++.++..+.+.+.++ ++. ..++++|+|++|+|-. |+++
T Consensus 75 ~~aHi~~~E~ga~~~~~G------------~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~ 142 (290)
T PF01212_consen 75 DTAHIHFDETGAIEELSG------------AKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVY 142 (290)
T ss_dssp TTEHHHHSSTTHHHHHTT------------CEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB--
T ss_pred ccceeeeeccchhhHhcC------------cEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeC
Confidence 99876553332 2344 47888887653444432 211 1568999999999853 8999
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCch
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYP 311 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~ 311 (441)
|.+++++|.++|++||+.++.|.+--.........++.++...-| ++--|++|.+++++ -+.++.+++++..
T Consensus 143 s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D--~v~~~~tK~~g~~~--Gavl~~~~~~i~~---- 214 (290)
T PF01212_consen 143 SLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGAD--SVSFGGTKNGGAPG--GAVLAGNKEFIAK---- 214 (290)
T ss_dssp -HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSS--EEEEETTSTT-SSS--EEEEEESHHHHHH----
T ss_pred CHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCC--EEEEEEEccccccc--ceEEEechHHHHH----
Confidence 999999999999999999999998543222111223333322223 55557999988765 3566777775411
Q ss_pred hHHHHHHHHhhhcCCCcHHHH-----HHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCce
Q 013521 312 VIKDFNRIVCTCFNGASNIVQ-----AGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAP 379 (441)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~-----~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 379 (441)
...+.+...........+.. .++...++.. .....+..++.+.+.+.|+..+..+..+..++
T Consensus 215 -~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~-----~~~~~~~~~~A~~La~~l~~~~~~~~~~~~tn 281 (290)
T PF01212_consen 215 -ARRQRKRLGGGMRQAGVLAAAELYQFAALRALELW-----LERARHANAMAKRLAAGLEALGGVLPRPVETN 281 (290)
T ss_dssp -HHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECS-----HHHHHCHHHHHHCHHHCHHEECEEEETTSS-H
T ss_pred -HHHHHHHhccCeeecceeeeechhhHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCc
Confidence 11111111111100112221 2333334321 34456667778899999998877665544443
No 348
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.44 E-value=1.2e-10 Score=123.82 Aligned_cols=335 Identities=13% Similarity=0.097 Sum_probs=192.8
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCC---CcCcHHHHHHHHHHHhhhCCCCCCcEEEcC-CcHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGA---EQGNMALRTAIADKFYKDMGIEGDEIFISD-GAQSD 147 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~-G~~~a 147 (441)
..+|-||.-. ...++.+.+.+.. ...+ ..++-|.| .+|..++...+.+|+.+..|.+ ++.+.. |++++
T Consensus 499 ~~~i~lGsct--~~~~p~~~~~~~~-~~~f---~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~g 570 (954)
T PRK05367 499 RSMIPLGSCT--MKLNAAAEMIPIT-WPEF---ANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQG 570 (954)
T ss_pred cceeeCCcCC--CcCCHHHHHHHHh-Cccc---cccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHH
Confidence 3466677632 2334443333322 1111 22444554 3577888888888888766654 455555 44444
Q ss_pred HHH-H---HHh-cCCCC----EEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CC----C-C
Q 013521 148 ISR-L---QML-LGSNV----TVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LS----T-T 212 (441)
Q Consensus 148 l~~-l---~~l-~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~----~-~ 212 (441)
... + ..+ .++|| .|++++..|++....+...| .+++.++.+.++..+.+ ++ . .
T Consensus 571 e~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G------------~~vv~v~~d~~G~iD~~~L~~~i~~~~ 638 (954)
T PRK05367 571 EYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAG------------MKVVVVACDENGNIDLDDLRAKAEEHA 638 (954)
T ss_pred HHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCC------------CEEEEECCCCCCCcCHHHHHHHHhccC
Confidence 422 2 222 25565 69999999988888888888 68999998765443322 21 1 1
Q ss_pred CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccC---
Q 013521 213 SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAG--- 289 (441)
Q Consensus 213 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~--- 289 (441)
.++.+|++++|++-.+...+ +++|+++|+++|+++++|.++......- .+...+ +-.++..|.+|+|+
T Consensus 639 ~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~l--~~pg~~----GADi~~~s~HK~f~~P~ 709 (954)
T PRK05367 639 DNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQVGL--ARPGDI----GADVSHLNLHKTFCIPH 709 (954)
T ss_pred CCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhccCC--CChhhc----CCCEEEecCcccCCCCc
Confidence 35777888888775333456 8999999999999999999986321110 011112 23488999999975
Q ss_pred -CccceeEEEEeeccccccCCchhH-HHHHHHHhhhcCCCcHH----HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Q 013521 290 -FTGVRLGWTVVPEELRYSNGYPVI-KDFNRIVCTCFNGASNI----VQAGGLACLSPDGFQALRTVIDYYKENAKIIVD 363 (441)
Q Consensus 290 -~~G~r~G~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 363 (441)
..|-.+|++.+.+.+... .+... ..-..........++.. ....+...+...|.+.+++..+..-.+.+++.+
T Consensus 710 G~GGPg~G~l~vr~~l~p~-lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~ 788 (954)
T PRK05367 710 GGGGPGVGPIGVKAHLAPF-LPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAK 788 (954)
T ss_pred CCCCCceEEEeeccccccc-CCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 234558888887654310 00000 00000000001111222 222223333334556667777767788999999
Q ss_pred HHHhC-CCeeeCCCCce--EEEEEc---C---CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHH
Q 013521 364 AFQSL-GLKVNGGKNAP--YVWVQF---P---GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISE 432 (441)
Q Consensus 364 ~L~~~-g~~~~~~~~~~--~~~~~~---~---~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~ 432 (441)
.|++. .+.+..+.+-. =..+++ + +....++.++|. ++|+....-+ | + .++.+||+. ..+++++++
T Consensus 789 ~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~-d~G~~~~t~~-~-p-v~~~l~i~ptE~~s~~elDr 864 (954)
T PRK05367 789 RLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLI-DYGFHAPTMS-F-P-VAGTLMVEPTESESKAELDR 864 (954)
T ss_pred HHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHH-HCCCeEeecC-C-c-cCCEEEEEeeecCCHHHHHH
Confidence 99774 44443321111 123333 3 235577878875 5599876532 3 2 367889886 558899999
Q ss_pred HHHHHHhh
Q 013521 433 ACRRLKNF 440 (441)
Q Consensus 433 ~l~~l~~~ 440 (441)
+++.|..+
T Consensus 865 ~~~al~~i 872 (954)
T PRK05367 865 FCDAMIAI 872 (954)
T ss_pred HHHHHHHH
Confidence 99998764
No 349
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.44 E-value=2.1e-11 Score=124.28 Aligned_cols=167 Identities=11% Similarity=0.089 Sum_probs=108.0
Q ss_pred CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCc
Q 013521 112 AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGK 190 (441)
Q Consensus 112 ~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~ 190 (441)
.+.|...--|..|+.+ +|.+ .-.+++||++.++.+ +++++.+||.|+++..+|-+..+.+.+.|
T Consensus 192 ~~~G~i~eAe~~AA~~---fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsg----------- 256 (714)
T PRK15400 192 DHSGPHKEAEEYIARV---FNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSD----------- 256 (714)
T ss_pred CCChHHHHHHHHHHHH---hCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcC-----------
Confidence 3445444334443333 3543 578899999999887 78889999999999999999999988888
Q ss_pred cceeEEeecCCC-CCc----c-----CC-----CCCCCCcc---EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 191 YRNIVYMNCRPE-NNF----F-----PD-----LSTTSRTD---IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 191 ~~~v~~v~~~~~-~~~----~-----~~-----~~~~~~~~---~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
+.+++++...+ .++ . ++ +...++.+ .++|++|++ -|.+++ +++|++.|+.++ |++
T Consensus 257 -a~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilv 329 (714)
T PRK15400 257 -VTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHF 329 (714)
T ss_pred -CeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEE
Confidence 46666654331 111 1 10 11123333 788888855 899999 677788887776 789
Q ss_pred ccccccc-ccCCC-C-Cccccc-CCCcceeEEEecCCcccCCcccee-EEEEeec
Q 013521 253 DSAYAAY-ITDPS-P-RSIYEI-PGAREVAIEISSFSKFAGFTGVRL-GWTVVPE 302 (441)
Q Consensus 253 De~~~~~-~~~~~-~-~~~~~~-~~~~~~~i~i~S~SK~~~~~G~r~-G~l~~~~ 302 (441)
||+|+.+ .|.+. + .+.... ...++.++.+.|.+|.+ +++.- +++....
T Consensus 330 DEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg 382 (714)
T PRK15400 330 DSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKG 382 (714)
T ss_pred EccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcC
Confidence 9999864 33332 1 222221 11124569999999998 45543 3444433
No 350
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.43 E-value=2e-10 Score=115.18 Aligned_cols=313 Identities=12% Similarity=0.075 Sum_probs=182.1
Q ss_pred CCCCCCcCcHHHHHHHHHHHhhhCCCC-----------C--CcEEEcCCcHHHHHH-HH----HhcC-------------
Q 013521 108 KGYGAEQGNMALRTAIADKFYKDMGIE-----------G--DEIFISDGAQSDISR-LQ----MLLG------------- 156 (441)
Q Consensus 108 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~-----------~--~~I~~t~G~~~al~~-l~----~l~~------------- 156 (441)
..|...+...++.+.+.+|+.+.++-. + ..-++|+|++.+... +. ..+.
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence 345556678899999999997744311 1 235778888887543 31 1221
Q ss_pred ---------CCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC------CCCccEEEE
Q 013521 157 ---------SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST------TSRTDIIFF 220 (441)
Q Consensus 157 ---------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~------~~~~~~v~i 220 (441)
++..|++.+-.|.++...+..+|. |. .+++.+|++.++..+++ +++ ..+++.+.+
T Consensus 199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lgl-g~--------~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~v 269 (522)
T TIGR03799 199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGI-GR--------DNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAI 269 (522)
T ss_pred hhhhhhccCCceEEEECCCchHHHHHHHHHcCC-Cc--------ccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEE
Confidence 234688888999999988888883 11 26888999865444332 111 134555555
Q ss_pred c--CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC-CCCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 221 C--SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP-SPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 221 ~--~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
+ ..++.||.+-| +++|+++|+++|+++++|.+|+....-. ....+ +.+......+..|.+|+++ ....+|.
T Consensus 270 vataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~--l~gle~aDSit~d~HK~l~-~P~g~G~ 343 (522)
T TIGR03799 270 VGVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL--LKGIERADSVTIDAHKQLY-VPMGAGM 343 (522)
T ss_pred EEEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH--hcCchhCCEEEEChhhcCC-cCcccEE
Confidence 5 44678999999 8899999999999999999998533211 01111 1222233478889999775 5677999
Q ss_pred EEeeccccccCCchhHHHHH-----HHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 013521 298 TVVPEELRYSNGYPVIKDFN-----RIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLK 371 (441)
Q Consensus 298 l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 371 (441)
++.++.............+. ........+.-.......-+.++..+...++.+.++..+.++++.+.|++. +++
T Consensus 344 llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~e 423 (522)
T TIGR03799 344 VLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFE 423 (522)
T ss_pred EEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 98876432100000000000 000001111111111122233332233556888888899999999999887 888
Q ss_pred eeCCCCceEEEEEcCCCC----------------h-------HHHHHHHHHhcCeEEeCCC-----CcCCCCCCeEEEEe
Q 013521 372 VNGGKNAPYVWVQFPGSS----------------S-------WDVFAEILEKTHILTIPGS-----GFGPGGNEHIRVSA 423 (441)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~----------------~-------~~~~~~ll~~~gi~v~pg~-----~f~~~~~~~iRls~ 423 (441)
+..++.-..+.+++.+.. . ..+.+++.++ |....... .+...+...+|+++
T Consensus 424 l~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~-G~~~vs~t~l~~~~~~g~~~~~lR~~~ 502 (522)
T TIGR03799 424 LVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREA-GKSFVSRTRLTPAQYDHQPTVVFRVVL 502 (522)
T ss_pred EecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEecccccCCCCcEEEEEEe
Confidence 877655566777753110 0 1223333333 55443311 11122235799998
Q ss_pred ec---CHHHHHHHHHH
Q 013521 424 FG---HREYISEACRR 436 (441)
Q Consensus 424 ~~---~~~~~~~~l~~ 436 (441)
.+ +.++++..++.
T Consensus 503 ~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 503 ANPLTTHEILQDILDE 518 (522)
T ss_pred cCCCCCHHHHHHHHHH
Confidence 54 67888887765
No 351
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.42 E-value=3.8e-11 Score=109.98 Aligned_cols=158 Identities=18% Similarity=0.259 Sum_probs=113.4
Q ss_pred cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHH----HHhcccccccccc
Q 013521 114 QGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTS----VIVGQAGKFLKET 188 (441)
Q Consensus 114 ~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~ 188 (441)
+-...|.+.||..- . |+ --+.++++++|+.. +..++++||.|+...--|.+-...+ +.+|
T Consensus 62 PT~~vlE~RiAaLE-G--G~---aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~G--------- 126 (426)
T COG2873 62 PTTDVLEERIAALE-G--GV---AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLG--------- 126 (426)
T ss_pred chHHHHHHHHHHhh-c--ch---hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcC---------
Confidence 34566777777652 1 11 22356667777776 8999999999999988887754444 4455
Q ss_pred CccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcc
Q 013521 189 GKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSI 268 (441)
Q Consensus 189 ~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~ 268 (441)
+++.+++.++-+.|... ..+++|+||+-+-.||-+.+.+ +++|+++|++||+++|+|..+.. |.-+
T Consensus 127 ---i~v~fvd~~d~~~~~~a--I~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~at------pyl~ 192 (426)
T COG2873 127 ---IEVRFVDPDDPENFEAA--IDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFAT------PYLC 192 (426)
T ss_pred ---cEEEEeCCCCHHHHHHH--hCcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCc------ceec
Confidence 58888876542232221 2479999999899999999999 99999999999999999998873 2111
Q ss_pred cccCCCcceeEEEecCCcccCCccceeEEEEeec
Q 013521 269 YEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPE 302 (441)
Q Consensus 269 ~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~ 302 (441)
..++ .+-.|++.|+||.+|-.|.-+|=+++..
T Consensus 193 rP~~--hGADIVvHS~TK~igGhGt~iGG~iVD~ 224 (426)
T COG2873 193 RPIE--HGADIVVHSATKYIGGHGTAIGGVIVDG 224 (426)
T ss_pred chhh--cCCCEEEEeecccccCCccccceEEEeC
Confidence 1121 1224899999999998888888777644
No 352
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.42 E-value=1e-10 Score=115.87 Aligned_cols=340 Identities=11% Similarity=0.085 Sum_probs=178.7
Q ss_pred CCCeEEeCCCC--CCC-CCcHHHHH--HHHHHHhhccC-CCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCc
Q 013521 71 DARLIRLGIGD--TTQ-PIPDIITS--AMAEHAFALST-VKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGA 144 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~-~~~~~~~~--al~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~ 144 (441)
++.++|+..|- ..+ ..+|.+.+ ++.+.+.+... ......| ......++-+.+++.. .+-..+.+.+++++
T Consensus 44 G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~-~~~~~~~la~~l~~~~---~p~~~~~v~f~~SG 119 (443)
T PRK08297 44 GRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDV-YTVEMARFVDTFARVL---GDPELPHLFFVDGG 119 (443)
T ss_pred CCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCc-CCHHHHHHHHHHHhhc---CCCCCCEEEEeCch
Confidence 45577775553 222 35688888 99888865321 0111122 2222333444444331 02234699999999
Q ss_pred HHHHHH-HHHh--c--------C---C-CCEEEEeCCCchhhHhHHHHhcc-cc----ccccccCccceeEEe--ecCCC
Q 013521 145 QSDISR-LQML--L--------G---S-NVTVAVQDPSFPAYIDTSVIVGQ-AG----KFLKETGKYRNIVYM--NCRPE 202 (441)
Q Consensus 145 ~~al~~-l~~l--~--------~---~-gd~Vlv~~p~y~~~~~~~~~~g~-~~----~~~~~~~~~~~v~~v--~~~~~ 202 (441)
++|+.. +... . . + ..+|+...-+|++....+..... .. .+............+ +...+
T Consensus 120 sEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (443)
T PRK08297 120 ALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGE 199 (443)
T ss_pred HHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccc
Confidence 999986 4211 1 1 1 25799999999997554443321 10 000000000000000 00000
Q ss_pred C--Ccc-------CC----CCC-CCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCC
Q 013521 203 N--NFF-------PD----LST-TSRTDIIFFCSP-NNPTGH-AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPR 266 (441)
Q Consensus 203 ~--~~~-------~~----~~~-~~~~~~v~i~~p-~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~ 266 (441)
. ... .+ ++. ..++.++++ .| +.--|. ..|++.+++|.++|++||+++|.||++..|...+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~-EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~ 278 (443)
T PRK08297 200 DLEEVEALEAEALAQARAAFERHPHDIACFIA-EPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW 278 (443)
T ss_pred ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEE-ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH
Confidence 0 000 00 011 245666554 66 444464 4789999999999999999999999998764443221
Q ss_pred cccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhH-HHHH-HHHhhhcCCCcHHHHHHHHHhcCCCcH
Q 013521 267 SIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVI-KDFN-RIVCTCFNGASNIVQAGGLACLSPDGF 344 (441)
Q Consensus 267 ~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~ 344 (441)
....++-.|| ++ +|+|.++ .| |.+ +.+++.. .. ..+. ......+.+.++++..++.+.++.-..
T Consensus 279 a~~~~gv~PD--iv--~~gK~l~-~~---a~l-~~~~i~~-----~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~ 344 (443)
T PRK08297 279 AYQQLGVRPD--IV--AFGKKTQ-VC---GIM-AGRRVDE-----VEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEE 344 (443)
T ss_pred HHHhcCCCCC--EE--Eeccccc-cc---cee-cchHHHH-----hhhhhccCccccCCCCCccHHHHHHHHHHHHHHHh
Confidence 1112222345 33 4899874 22 343 3333210 00 0010 011223444678888888887762111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh----CC-C--eeeCCCCceEEEEEcCCCC-hHHHHHHHHHhcCeEEeCCCCcCCCCC
Q 013521 345 QALRTVIDYYKENAKIIVDAFQS----LG-L--KVNGGKNAPYVWVQFPGSS-SWDVFAEILEKTHILTIPGSGFGPGGN 416 (441)
Q Consensus 345 ~~~~~~~~~~~~~~~~l~~~L~~----~g-~--~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gi~v~pg~~f~~~~~ 416 (441)
+.+.+..++.-+.+.+.|++ ++ + .+. ..|.++.++++... ...+...++ ++||.+.|+. .
T Consensus 345 ---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr--g~G~~~~i~~~~~~~~~~~~~~l~-~~Gvl~~~~~------~ 412 (443)
T PRK08297 345 ---DGLVENAARQGEYLLARLEELAAEFPAVVSNVR--GRGLMCAFDLPTTADRDEVIRRLW-EEGVLVLPCG------E 412 (443)
T ss_pred ---cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeee--ccceEEEEEecCHHHHHHHHHHHH-HCCEEEecCC------C
Confidence 22334444444455454443 32 2 222 24777788886322 235566666 4599998742 3
Q ss_pred CeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 417 EHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 417 ~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
+.+|++ +..+++++++++++|.+++
T Consensus 413 ~~lr~~P~l~~t~~eid~~l~~l~~~l 439 (443)
T PRK08297 413 RSIRFRPALTVTTEEIDAAIDALRRAL 439 (443)
T ss_pred CeEEEECCccCCHHHHHHHHHHHHHHH
Confidence 568885 6679999999999998764
No 353
>PLN02263 serine decarboxylase
Probab=99.41 E-value=1.7e-09 Score=105.71 Aligned_cols=315 Identities=11% Similarity=0.023 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCC--cEEEcCCcHHHHHH-HHHh--cCCCCEEE
Q 013521 88 DIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD--EIFISDGAQSDISR-LQML--LGSNVTVA 162 (441)
Q Consensus 88 ~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~--~I~~t~G~~~al~~-l~~l--~~~gd~Vl 162 (441)
..+.+.+.-.+.+.++.-....| .-+..++.+.+-+|+.+.++.+++ .=++|+|+|++... +... ..+...|+
T Consensus 105 s~l~~~l~~~~nN~Gdp~~~s~~--~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy 182 (470)
T PLN02263 105 GALGQLQHFSINNLGDPFIESNY--GVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILY 182 (470)
T ss_pred hhHHHHHHhhccCCCCccccCCc--chhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEE
Confidence 44555555555544331111222 226788999999999887787654 35788999988654 4222 22344788
Q ss_pred EeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC-----CCCccEEEEcCCCCccccCCCHHHH
Q 013521 163 VQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST-----TSRTDIIFFCSPNNPTGHAATWQQL 236 (441)
Q Consensus 163 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~ 236 (441)
+++-+|.++..+++.+| ++++.||++.++..+.+ +++ ..++-+|+.+-...+||.+=| +
T Consensus 183 ~S~~aH~Sv~KAa~llg------------i~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i 247 (470)
T PLN02263 183 ASRESHYSVFKAARMYR------------MECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---L 247 (470)
T ss_pred EcCCccHHHHHHHHhcC------------CcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---H
Confidence 89999999999999999 58888998765433332 111 123445555677889999977 8
Q ss_pred HHHHHHHHHcCc-----EEEEcccccccccCC-CCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCc
Q 013521 237 KKLVEFAKANGS-----IIVYDSAYAAYITDP-SPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY 310 (441)
Q Consensus 237 ~~i~~~a~~~~~-----~ii~De~~~~~~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~ 310 (441)
++|.++|+++|+ ++.+|.+|+.+...- ...+...+ .....-+.-+.+|.++ ....+|.++.+++.+..-.
T Consensus 248 ~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df--~~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~~~~~- 323 (470)
T PLN02263 248 DLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTF--KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLS- 323 (470)
T ss_pred HHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCC--CcCccEEEECCccccC-CCcCEEEEEEehhhHhhhc-
Confidence 888888999996 999999998754311 01111122 1123345667899997 8889999998876531100
Q ss_pred hhHHHHHHHHhhhcCCCcHHH--HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcCCC
Q 013521 311 PVIKDFNRIVCTCFNGASNIV--QAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFPGS 388 (441)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 388 (441)
...+.+.. ...... .+... ...+-..|...+.+.++++.+..-+..+++.+.|++.|+.....+..+.+.+..+.
T Consensus 324 ~~~~Yl~~-~d~ti~-gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~p~- 400 (470)
T PLN02263 324 SNVEYLAS-RDATIM-GSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPK- 400 (470)
T ss_pred cChHhhCC-CCCCcC-CCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEecCc-
Confidence 00011110 001111 12211 12223334445566778888888889999999999988877655667667776542
Q ss_pred ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec--CHHHHHHHHHHHHhh
Q 013521 389 SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG--HREYISEACRRLKNF 440 (441)
Q Consensus 389 ~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~~~~~~l~~l~~~ 440 (441)
.+. .. +|-.+.+ .++.+++++.. +.+.++++++.|++.
T Consensus 401 --~~~----~~-~gW~L~~-------~~~~~Hivvmphv~~~~id~fi~DL~~~ 440 (470)
T PLN02263 401 --DEE----FV-RRWQLAC-------QGNIAHVVVMPSVTIEKLDYFLKELVEK 440 (470)
T ss_pred --hHH----hh-cceEEcc-------CCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 111 12 3555544 12458888733 678899999888763
No 354
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.39 E-value=5.4e-11 Score=123.69 Aligned_cols=306 Identities=14% Similarity=0.131 Sum_probs=182.2
Q ss_pred CCCCC---CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHh----cC---C-CCEEEEeCCCchhhHhHHH
Q 013521 108 KGYGA---EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQML----LG---S-NVTVAVQDPSFPAYIDTSV 176 (441)
Q Consensus 108 ~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l----~~---~-gd~Vlv~~p~y~~~~~~~~ 176 (441)
+-|.| .+|..++...+.+++.+..|.+.-.+...+|++.-+..++.+ .. + .++|+++.-.|......+.
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~ 609 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQ 609 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHH
Confidence 45777 789999999999888876666555555556665443433322 22 2 3578888877754444466
Q ss_pred HhccccccccccCccceeEEeecCCCCCccCC-CCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEE
Q 013521 177 IVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST-----TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSII 250 (441)
Q Consensus 177 ~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~-----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i 250 (441)
..| .+++.++.++++..+.+ ++. .+++.+|++++|++-.+. ++.+++|+++|+++|+++
T Consensus 610 ~~G------------ieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv 674 (954)
T PRK12566 610 MAG------------MRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQV 674 (954)
T ss_pred HCC------------CEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEE
Confidence 666 59999999865543322 111 256777777788764433 455999999999999999
Q ss_pred EEcccccccccCCCCCcccccCCCcceeEEEecCCcccCC----ccceeEEEEeecc---ccccC-CchhHHHHHHHHhh
Q 013521 251 VYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGF----TGVRLGWTVVPEE---LRYSN-GYPVIKDFNRIVCT 322 (441)
Q Consensus 251 i~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~----~G~r~G~l~~~~~---~~~~~-~~~~~~~~~~~~~~ 322 (441)
++|.++.. .... ......+ +.+|+.++++|+|+. .|.-+|.+.+.+. ++... .........+....
T Consensus 675 ~vDgA~~~-a~~~-l~~Pg~~----GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~ 748 (954)
T PRK12566 675 YMDGANLN-AQVG-LARPADI----GADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAV 748 (954)
T ss_pred EEEeeChh-hccC-CCChhhc----CCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCce
Confidence 99999862 1111 1111122 345999999998852 3555777666653 32110 00000000000111
Q ss_pred -hcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCce-E--EEEE---cC---CCChH
Q 013521 323 -CFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAP-Y--VWVQ---FP---GSSSW 391 (441)
Q Consensus 323 -~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~--~~~~---~~---~~~~~ 391 (441)
.....+.....++...+...|.+ +.+.......+.+++.+.|.+. ++.+.+ .++. | ..++ ++ +.+..
T Consensus 749 S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~-~~~~~~hEfii~~~~l~~~~g~~~~ 826 (954)
T PRK12566 749 SAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYRG-RNERVAHECILDLRPLKAQTGISEE 826 (954)
T ss_pred eecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCC-CCCCeeeEEEEEccccccccCCCHH
Confidence 01111222233345555545555 6666666677889999999764 555432 2233 1 2223 32 24557
Q ss_pred HHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 392 DVFAEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 392 ~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
++.++|+ ++||....- .| + ..+++|++. ..++++++++++.|..+
T Consensus 827 dvakRL~-d~Gihapt~-~f-P-v~~~LmIepTE~eskeEIDrf~eAL~~I 873 (954)
T PRK12566 827 DVAKRLM-DYGFHAPTM-SF-P-VPGTLMVEPTESESKAELDRFVEAMLSI 873 (954)
T ss_pred HHHHHHH-HCCcEEeEE-ee-c-cCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence 7888888 569876542 33 3 377899995 56899999999998764
No 355
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.39 E-value=4.6e-10 Score=114.55 Aligned_cols=151 Identities=12% Similarity=0.094 Sum_probs=100.4
Q ss_pred CCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCC-CCc---
Q 013521 131 MGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPE-NNF--- 205 (441)
Q Consensus 131 ~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~-~~~--- 205 (441)
+|.+ .-.+++||+|.++.+ +++++.+||.|+++..+|-+..+.+.+.| +.+++++...+ .++
T Consensus 208 fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsg------------a~PVYl~P~~n~~Gi~g~ 274 (713)
T PRK15399 208 FGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSD------------VVPIWLKPTRNALGILGG 274 (713)
T ss_pred hCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcC------------CeeEEecccccccCCcCC
Confidence 3543 578899999999887 78899999999999999999999998888 46666654321 111
Q ss_pred -cC-----C-----CCCC---CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEE-EEcccccccc-cCCC--CCc
Q 013521 206 -FP-----D-----LSTT---SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSII-VYDSAYAAYI-TDPS--PRS 267 (441)
Q Consensus 206 -~~-----~-----~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i-i~De~~~~~~-~~~~--~~~ 267 (441)
.+ + +.+. .++++++|++|++ -|.+++ +++|++.| |+.+ ++||+|+.+. |.+. +.+
T Consensus 275 I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~s 347 (713)
T PRK15399 275 IPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKS 347 (713)
T ss_pred CChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcC
Confidence 11 0 1112 3446889988855 899999 55666666 4555 6999998643 3331 122
Q ss_pred cccc-CCCcceeEEEecCCcccCCccce-eEEEEeecc
Q 013521 268 IYEI-PGAREVAIEISSFSKFAGFTGVR-LGWTVVPEE 303 (441)
Q Consensus 268 ~~~~-~~~~~~~i~i~S~SK~~~~~G~r-~G~l~~~~~ 303 (441)
.... .+.+..++.+.|.+|.++ ++. .+++.+...
T Consensus 348 am~~~~~aD~~i~~tQStHKtL~--alTQaS~iHvk~~ 383 (713)
T PRK15399 348 GMSGERVPGKVIFETQSTHKMLA--AFSQASLIHIKGE 383 (713)
T ss_pred hhhCCCCCCeeeeeeeehhcccc--ccchheeeeecCC
Confidence 2222 123344577999999984 554 456666543
No 356
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.39 E-value=6.8e-10 Score=97.36 Aligned_cols=276 Identities=19% Similarity=0.203 Sum_probs=176.3
Q ss_pred cHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCcccee
Q 013521 116 NMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNI 194 (441)
Q Consensus 116 ~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v 194 (441)
...+.+.+++|+ | .|.+-+|+|+.++=++ ..+++++||.|++...+|....-++...| +++
T Consensus 63 I~~F~~dlaeFl----g--~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAErag------------l~v 124 (382)
T COG1103 63 IKDFLEDLAEFL----G--MDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAG------------LNV 124 (382)
T ss_pred HHHHHHHHHHHh----C--CceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcC------------CeE
Confidence 456677789987 4 4677799999999887 56788999999999998877666777777 588
Q ss_pred EEeecCCCCCccCCCC----------C--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC
Q 013521 195 VYMNCRPENNFFPDLS----------T--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD 262 (441)
Q Consensus 195 ~~v~~~~~~~~~~~~~----------~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~ 262 (441)
..+|-...-.+..+.+ + ...+.+.++++|..--|.+-+ -++++++|+++|+.++...+|..-
T Consensus 125 ~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~G--- 198 (382)
T COG1103 125 AEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTVG--- 198 (382)
T ss_pred EecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceeec---
Confidence 8888432222222221 1 145788888888666776655 889999999999999999999742
Q ss_pred CCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHH-h-h---------h-cCCCcHH
Q 013521 263 PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIV-C-T---------C-FNGASNI 330 (441)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~-~-~---------~-~~~~~~~ 330 (441)
.-|.+..+.. ..++++|-+|.++ +.-.+|.+..+.++- +...+.. . . + ..+.+.+
T Consensus 199 rmpvs~ke~g----~DFiVgSGHKsmA-As~PiGvl~~~eE~a--------e~V~r~Sg~~~~~KEvellGCT~rGapiv 265 (382)
T COG1103 199 RMPVSGKEIG----ADFIVGSGHKSMA-ASAPIGVLAMSEEWA--------EIVLRRSGRAFPKKEVELLGCTVRGAPIV 265 (382)
T ss_pred cccccccccC----CCEEEecCccchh-ccCCeeEEeehhHHH--------HHHHhhcccccccceeeeecccccCchHH
Confidence 2255655552 2499999999997 666899999988872 2221111 0 0 0 1112222
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeC--CCCceEEEEEcCCCChH--------H-HHHHHH
Q 013521 331 VQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNG--GKNAPYVWVQFPGSSSW--------D-VFAEIL 398 (441)
Q Consensus 331 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~~~--------~-~~~~ll 398 (441)
+. .+.+- .-...-++.+.--++.+.+.+.|+++ |+...+ |..--.+.+..|..... = ++.. |
T Consensus 266 Tl---mASfP--~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~E-L 339 (382)
T COG1103 266 TL---MASFP--HVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEE-L 339 (382)
T ss_pred HH---HhcCH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHH-H
Confidence 22 12221 11111222333345677888889888 465432 33333455555532111 1 3344 4
Q ss_pred HhcCeE-EeCCCCcCCCCCCeEEEEeec-CHHHHHHHHHHHHhh
Q 013521 399 EKTHIL-TIPGSGFGPGGNEHIRVSAFG-HREYISEACRRLKNF 440 (441)
Q Consensus 399 ~~~gi~-v~pg~~f~~~~~~~iRls~~~-~~~~~~~~l~~l~~~ 440 (441)
+++||. +.|| ...++.+|++. +.++++..++.++++
T Consensus 340 K~RgI~GI~~G------~Tk~~K~svyGl~~Eqve~V~~afkeI 377 (382)
T COG1103 340 KKRGIHGIQPG------QTKYFKLSVYGLSWEQVEYVVDAFKEI 377 (382)
T ss_pred HhcCccccccC------ceeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 444664 4444 36789999755 889999999988876
No 357
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.38 E-value=1.5e-10 Score=106.60 Aligned_cols=326 Identities=16% Similarity=0.119 Sum_probs=193.6
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-H-HH-hcCCCCEE
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-L-QM-LLGSNVTV 161 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l-~~-l~~~gd~V 161 (441)
...|.+.+++.+.+..+. .....|..+ -..++.+++++.+ .-+-.-++++|++++|.++ + +. +....-.|
T Consensus 66 HchP~v~~a~~kQl~~l~--H~t~~~~~~-pi~~~Ae~L~s~~----P~~l~~vfF~nsGsEANelal~mar~Yt~~~di 138 (442)
T KOG1404|consen 66 HCHPDVVAAAVKQLKKLY--HTTSGYLNP-PIHDLAEALVSKL----PGDLKVVFFVNSGSEANELALKMARLYTGNLDI 138 (442)
T ss_pred CCChHHHHHHHHhhhhhE--EeeccccCC-cHHHHHHHHHHhC----CCCceEEEEecCCchHHHHHHHHHHHhcCCceE
Confidence 367889999999887665 344456433 4567777777765 4455679999999999886 3 22 22333467
Q ss_pred EEeCCCchhhHhHHHHhccccc--cccccCccceeEEeecCCCCCcc-------------CCCCC-----CCCccEEEEc
Q 013521 162 AVQDPSFPAYIDTSVIVGQAGK--FLKETGKYRNIVYMNCRPENNFF-------------PDLST-----TSRTDIIFFC 221 (441)
Q Consensus 162 lv~~p~y~~~~~~~~~~g~~~~--~~~~~~~~~~v~~v~~~~~~~~~-------------~~~~~-----~~~~~~v~i~ 221 (441)
+.-..+|++.......+...+- +............+..++..+.. .++++ .+++-+-++.
T Consensus 139 Ia~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafia 218 (442)
T KOG1404|consen 139 IARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIA 218 (442)
T ss_pred EEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEe
Confidence 7778889886444333221110 00000000000111111110000 01111 2333444666
Q ss_pred CC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEE
Q 013521 222 SP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTV 299 (441)
Q Consensus 222 ~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~ 299 (441)
.+ +---|++ +++..+++..++|+++|.+.|.||+...|...+......+-+-.|| |-|++|.+| .|+.+|.++
T Consensus 219 EtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PD----IvTmAKgiG-nG~Pl~AVv 293 (442)
T KOG1404|consen 219 ETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPD----IVTMAKGIG-NGFPLGAVV 293 (442)
T ss_pred ehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCcc----HHHHHhhcc-CCCcceeee
Confidence 55 6555655 7889999999999999999999999998776553222222222344 668999999 999999999
Q ss_pred eeccccccCCchhHHHHHHHH-hhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCC
Q 013521 300 VPEELRYSNGYPVIKDFNRIV-CTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL--GLKVNGGK 376 (441)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~ 376 (441)
+.+++ .+-+.+.. ...+.+.++++..++.+.|+--. -+++.+..++--.+|.+.|.++ +.+..+.-
T Consensus 294 tt~EI--------a~v~~~~~~~fnTyggnP~a~avg~aVL~Vik---ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdV 362 (442)
T KOG1404|consen 294 TTPEI--------ADVLNQKSSHFNTYGGNPVACAVGLAVLKVIK---EENLQENAAEVGSYLLEKLAALKDKHPIIGDV 362 (442)
T ss_pred cCHHH--------HHHHHhccccccccCCCchhHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHhhcCCceeec
Confidence 99887 34444333 33445577888888888876211 1444555555566777777665 33332222
Q ss_pred --CceEEEEEcCCCC---------hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHH
Q 013521 377 --NAPYVWVQFPGSS---------SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRL 437 (441)
Q Consensus 377 --~~~~~~~~~~~~~---------~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l 437 (441)
.|.++=+++-+.. ...++..-+++.|+.|--|..++ +.+||+ ++-++++++-+++..
T Consensus 363 RG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G----~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 363 RGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG----NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc----eEEEecCCeeccHHHHHHHHHHH
Confidence 3555555542111 12234444566799996666544 389999 677889987776643
No 358
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.38 E-value=3e-10 Score=102.17 Aligned_cols=332 Identities=14% Similarity=0.169 Sum_probs=195.9
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYG-AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISR 150 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~ 150 (441)
.++|.|+-+.....++....+..+.+..+... ...-++. ....-.++-+.+.+.+...+|..+.+++++.+++-.++-
T Consensus 30 ~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~-~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k 108 (407)
T COG3844 30 GGVIYLDGNSLGARPRAVTARLQQVATDEWGE-GLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFK 108 (407)
T ss_pred CCeEEeeccccccCchHHHHHHHHHHHHHHHh-hhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHH
Confidence 47899987776544434444444444433321 1111111 122334555566666666679999999999999999886
Q ss_pred -HHHhc--CCCCEEEEeCC-Cchhh----HhHHHHhccccccccccCccceeEEeecCCCCCccC-CCCC--CCCccEEE
Q 013521 151 -LQMLL--GSNVTVAVQDP-SFPAY----IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFP-DLST--TSRTDIIF 219 (441)
Q Consensus 151 -l~~l~--~~gd~Vlv~~p-~y~~~----~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~-~~~~--~~~~~~v~ 219 (441)
|.+.+ .+|+.|++++- +|+.= ...+...+.. .++..+ ..+ ++++ ..++.+|+
T Consensus 109 ~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~----------~~~~~~-------~~P~~~~~~~~dd~AvV~ 171 (407)
T COG3844 109 VLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG----------YDLEGV-------IAPRALEEAITDDVAVVL 171 (407)
T ss_pred HHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc----------ccceee-------eChHHHHHhhccceEEEE
Confidence 55555 45788887654 55442 2333333310 011111 111 1111 36788899
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCC-ccceeEEE
Q 013521 220 FCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGF-TGVRLGWT 298 (441)
Q Consensus 220 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~-~G~r~G~l 298 (441)
+++.+.-||+.++ +.+|.++|++||++++-|=+|+--.. |..+-. .+..+-|++-.|.++. ||- .+++
T Consensus 172 L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav---p~~Lh~----~gaDfaigcsyKYLNgGPGa-pa~l 240 (407)
T COG3844 172 LSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV---PVDLHA----AGADFAIGCSYKYLNGGPGA-PAGL 240 (407)
T ss_pred eccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc---ceeecc----cCCCeeeeeeceeccCCCCC-ceeE
Confidence 9899999999999 99999999999999999999884222 333322 2345889999998763 332 4566
Q ss_pred EeeccccccCCchhH------HHHH---HH------HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Q 013521 299 VVPEELRYSNGYPVI------KDFN---RI------VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVD 363 (441)
Q Consensus 299 ~~~~~~~~~~~~~~~------~~~~---~~------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 363 (441)
.+.++..+.-.+.+. +++. .+ ..+...+.+..+..+....|+-...-.+.++|++--...+++++
T Consensus 241 ~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fie 320 (407)
T COG3844 241 FVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIE 320 (407)
T ss_pred EeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHH
Confidence 655554321100000 0010 00 01111123333333333333311112367778887788889999
Q ss_pred HHHhC----CCeeeCCC----CceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEe---ecCHHHHHH
Q 013521 364 AFQSL----GLKVNGGK----NAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSA---FGHREYISE 432 (441)
Q Consensus 364 ~L~~~----g~~~~~~~----~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~---~~~~~~~~~ 432 (441)
.++.+ ++++..|. .|..+.+..+ ...+++++|.+ +||..- | ..++-+|+++ +.+-.++-.
T Consensus 321 LvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--~~~~V~qaLi~-rGVigD----~--R~P~vlRfgftPlY~~~~DVw~ 391 (407)
T COG3844 321 LVEARCEYYGLTLVTPRAHEERGSQVSLYHP--HGYQVMQALID-RGVIGD----F--REPDVLRFGFTPLYVSFVDVWD 391 (407)
T ss_pred HHHhccccCCcEEeccchhhhccceeeEecC--cHHHHHHHHHH-cCcccc----c--cCCCeeeecCccceechhHHHH
Confidence 88865 56665443 3667888877 45667677665 598741 2 2367899996 567888888
Q ss_pred HHHHHHhhC
Q 013521 433 ACRRLKNFL 441 (441)
Q Consensus 433 ~l~~l~~~l 441 (441)
+++.|.+++
T Consensus 392 AV~~L~evL 400 (407)
T COG3844 392 AVDALEEVL 400 (407)
T ss_pred HHHHHHHHH
Confidence 888888764
No 359
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=7.2e-11 Score=108.53 Aligned_cols=337 Identities=13% Similarity=0.148 Sum_probs=213.6
Q ss_pred CCCeEEeCCCCC-CCCCcHHHHHHHHHHHhhccCC--CCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGDT-TQPIPDIITSAMAEHAFALSTV--KGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~~-~~~~~~~~~~al~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
+++++||.+... .+...+.+.+.....++.++.. ..-.-|+...-...+.+.||+++ |+ ++.|+...|-+..
T Consensus 93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G~-E~aivYs~gF~ti 167 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----GT-EDAIVYSYGFSTI 167 (467)
T ss_pred CceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh----CC-cceeeeccccchh
Confidence 457788887763 4567788999999999987521 11223777667788999999996 64 5788888888877
Q ss_pred HHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCcc---CCCC--C--CC---C-cc
Q 013521 148 ISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFF---PDLS--T--TS---R-TD 216 (441)
Q Consensus 148 l~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~---~~~~--~--~~---~-~~ 216 (441)
-+.+-++.+.||.|.+.+-....+....+... -.++++..++..++. ++.+ + .+ . .+
T Consensus 168 ~S~ipafsKrGDIi~~de~~nfaIq~GlqlSR------------S~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rr 235 (467)
T KOG1358|consen 168 ESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSR------------STISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRR 235 (467)
T ss_pred hhcchhhhccCcEEEEehhhhHHHHHHHhhhh------------heeEEecCCCHHHHHHhccCcchhhhhccccccceE
Confidence 67899999999999998888877766666555 256666655433321 1111 1 11 2 23
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC--CcceeEEEecCCcccCCccce
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG--AREVAIEISSFSKFAGFTGVR 294 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~--~~~~~i~i~S~SK~~~~~G~r 294 (441)
.|++-----+||.+.| +.+|+++..+|...||.||.|+.-..+.....+..-.+ ..+..++++|+.-+++..|
T Consensus 236 fiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G-- 310 (467)
T KOG1358|consen 236 FIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG-- 310 (467)
T ss_pred EEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC--
Confidence 3444344455999999 88999999999999999999985444432233322111 2456689999998887666
Q ss_pred eEEEEeeccccccCCchhHHHHHHHHhhhcC-CCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 013521 295 LGWTVVPEELRYSNGYPVIKDFNRIVCTCFN-GASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKV 372 (441)
Q Consensus 295 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 372 (441)
||.++..-.+.. +++.. ...++. +.++....++..++.-. ++-..+.+.++.....+...|... ++.+
T Consensus 311 -gFc~G~~~i~~h------QrLSg-~~Y~fSAslPp~la~aa~~ai~i~--~~~p~~~~~L~~k~~~~H~~l~~~s~~~v 380 (467)
T KOG1358|consen 311 -GFCAGKSFIADH------QRLSG-SGYCFSASLPPYLAGAAIKAILIE--EWNPEIVQPLRAKVAKFHAALSSNSGFIV 380 (467)
T ss_pred -ceeecceeeEee------eeccc-cceeeeccCchhhhhhHHHHHHHH--hhCcchhhhhhccccccchhhhcCCceEE
Confidence 777764433211 11211 011111 13333333334343311 111335566666777777888765 6788
Q ss_pred eCCCCceEEEEEcCC-----CCh----HHHHHHHHHhcCeEEeCCCCcC----CCCCCeEEEEeec--CHHHHHHHHHHH
Q 013521 373 NGGKNAPYVWVQFPG-----SSS----WDVFAEILEKTHILTIPGSGFG----PGGNEHIRVSAFG--HREYISEACRRL 437 (441)
Q Consensus 373 ~~~~~~~~~~~~~~~-----~~~----~~~~~~ll~~~gi~v~pg~~f~----~~~~~~iRls~~~--~~~~~~~~l~~l 437 (441)
....-++.+.+.+.. ..+ ++++...+.+ |+.+.....-. ..-+..+||++.. ++++++++.+.|
T Consensus 381 ~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~i 459 (467)
T KOG1358|consen 381 SGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELI 459 (467)
T ss_pred ecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 777778888888863 111 2344455555 77776554321 1235679999843 899999999998
Q ss_pred Hhh
Q 013521 438 KNF 440 (441)
Q Consensus 438 ~~~ 440 (441)
++.
T Consensus 460 k~~ 462 (467)
T KOG1358|consen 460 KEV 462 (467)
T ss_pred HHH
Confidence 863
No 360
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.36 E-value=1.6e-09 Score=107.27 Aligned_cols=338 Identities=11% Similarity=0.071 Sum_probs=172.8
Q ss_pred CCeEEeCCCC--CCC-CCcHHHH--HHHHHHHhhccC-CCCCCCCCCCcCcHHHHHHHHHHHhhhC-CCCCCcEEEcCCc
Q 013521 72 ARLIRLGIGD--TTQ-PIPDIIT--SAMAEHAFALST-VKGYKGYGAEQGNMALRTAIADKFYKDM-GIEGDEIFISDGA 144 (441)
Q Consensus 72 ~~~i~l~~g~--~~~-~~~~~~~--~al~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~l~~~~-~~~~~~I~~t~G~ 144 (441)
+.++|+..|- ..+ ..+|.+. +++.+.+.+... ......+ . .+....+++.+.+.. .-..+.+++++++
T Consensus 38 ~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~----~-~~~~~~l~~~l~~~~~~~~~~~v~f~~sG 112 (431)
T TIGR03251 38 RRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDV----Y-TVAMARFVDTFARVLGDPALPHLFFIEGG 112 (431)
T ss_pred CChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCC----C-CHHHHHHHHHHHHhcCCCCcCEEEEeCCc
Confidence 4456654442 112 2567787 888888765320 0111112 1 122233333333211 1134689999999
Q ss_pred HHHHHH-HH--HhcC------------CCCEEEEeCCCchhhHhHHHHh-ccccccccccCccceeEEe-------ecCC
Q 013521 145 QSDISR-LQ--MLLG------------SNVTVAVQDPSFPAYIDTSVIV-GQAGKFLKETGKYRNIVYM-------NCRP 201 (441)
Q Consensus 145 ~~al~~-l~--~l~~------------~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~v~~v-------~~~~ 201 (441)
++|+.. +. .... .+.+|+...-+|++....+... |......... .......+ +.+.
T Consensus 113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~ 191 (431)
T TIGR03251 113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARF-PKFDWPRIDNPKLTFPLDA 191 (431)
T ss_pred HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCC-CCCCCccCCCCcccCCccc
Confidence 999886 42 1111 1367999999999975444333 2111100000 00000000 1100
Q ss_pred CC-C-c----cCCC-------CC-CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCC
Q 013521 202 EN-N-F----FPDL-------ST-TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSP 265 (441)
Q Consensus 202 ~~-~-~----~~~~-------~~-~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~ 265 (441)
.. . . ..++ +. ..++.++++ .| +.-.|.+ .|++.+++|.++|++||+++|.||++..|...+..
T Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~~~~~iAaviv-EPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~ 270 (431)
T TIGR03251 192 PNLDQVIALEEEALRQARAAFAERPHDIACFIA-EPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTA 270 (431)
T ss_pred cccchhhHHHHHHHHHHHHHHHhCCCcEEEEEE-eccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchH
Confidence 00 0 0 0001 01 245666665 55 5556765 68899999999999999999999999976544322
Q ss_pred CcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHH-HHH-HHHhhhcCCCcHHHHHHHHHhcCCCc
Q 013521 266 RSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIK-DFN-RIVCTCFNGASNIVQAGGLACLSPDG 343 (441)
Q Consensus 266 ~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~ 343 (441)
.....++-.+| ++ +++|.+. . .|++... ++.. ... .+. ......+.+.+++...++.+.++.-.
T Consensus 271 ~a~~~~gv~PD--i~--~~gK~~~-~---~g~~~~~-~i~~-----~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 336 (431)
T TIGR03251 271 WAYQQLGVQPD--IV--AFGKKTQ-V---CGIMAGR-RVDE-----VADNVFAVPSRLNSTWGGNLVDMVRATRILEIIE 336 (431)
T ss_pred HHHHhcCCCCC--EE--EecccCc-c---ceEEecc-hHHH-----hhhhcccCccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 11112222345 33 4788862 2 3565443 2200 000 000 00112334467777777777776211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----CC-CeeeCCCCceEEEEEcCCCCh-HHHHHHHHHhcCeEEeCCCCcCCCCCC
Q 013521 344 FQALRTVIDYYKENAKIIVDAFQS----LG-LKVNGGKNAPYVWVQFPGSSS-WDVFAEILEKTHILTIPGSGFGPGGNE 417 (441)
Q Consensus 344 ~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~gi~v~pg~~f~~~~~~ 417 (441)
. +...+..+++-+.+.+.|++ +. +.......|.++.++++.... ..+...++ ++||.+.|.. .+
T Consensus 337 ~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~-~~Gvl~~~~g------~~ 406 (431)
T TIGR03251 337 E---ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLY-REGVLLLGCG------ER 406 (431)
T ss_pred h---cCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHHHHHHHHHHHH-hCCeEEecCC------CC
Confidence 1 11223333344444444433 32 322122246777777763222 34556655 5599997742 35
Q ss_pred eEEEE--eecCHHHHHHHHHHHHhh
Q 013521 418 HIRVS--AFGHREYISEACRRLKNF 440 (441)
Q Consensus 418 ~iRls--~~~~~~~~~~~l~~l~~~ 440 (441)
.+|++ +..+++++++++++|.++
T Consensus 407 ~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 407 SIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred eEEEECCccCCHHHHHHHHHHHHhC
Confidence 68887 467999999999999763
No 361
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.32 E-value=6.9e-10 Score=106.68 Aligned_cols=328 Identities=13% Similarity=0.069 Sum_probs=184.6
Q ss_pred CcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCC-CCCCcEEEcCCcHHHHHH-HH-H--hc----C
Q 013521 86 IPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMG-IEGDEIFISDGAQSDISR-LQ-M--LL----G 156 (441)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~-~~~~~I~~t~G~~~al~~-l~-~--l~----~ 156 (441)
-.+.+.+|+.+.+.++.- .........+ ..+|-+.|++.. + -+-+.|++++|+++++++ +. . .. +
T Consensus 61 ~~~~i~~Ai~~Q~~~l~~-~~~~~~t~~P-a~~LA~~L~~~a----P~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~ 134 (449)
T COG0161 61 GRPEIAEAIKKQLDKLPH-VMFGGFTHEP-AIELAEKLAELA----PEGGLDHVFFTDSGSEAVETALKMALQYWRARGQ 134 (449)
T ss_pred CCHHHHHHHHHHHHhCCc-hhhcccCCch-HHHHHHHHHHhC----CCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCC
Confidence 358899999998887541 1111121222 455555555553 3 236799999999999986 42 1 11 2
Q ss_pred CC-CEEEEeCCCchhhHhHHHHhcc-cccc-ccccCccceeEEeecCC------CCCccCC-------CCC-----CCCc
Q 013521 157 SN-VTVAVQDPSFPAYIDTSVIVGQ-AGKF-LKETGKYRNIVYMNCRP------ENNFFPD-------LST-----TSRT 215 (441)
Q Consensus 157 ~g-d~Vlv~~p~y~~~~~~~~~~g~-~~~~-~~~~~~~~~v~~v~~~~------~~~~~~~-------~~~-----~~~~ 215 (441)
|. .+++.-..+|++-.-.....|. .... .....-...+..++... .+...++ +++ .+..
T Consensus 135 p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~ 214 (449)
T COG0161 135 PQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPET 214 (449)
T ss_pred CcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCccc
Confidence 32 3488899999886433333332 1110 00000001222333221 0111111 111 2234
Q ss_pred cEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcc
Q 013521 216 DIIFFCSP--NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTG 292 (441)
Q Consensus 216 ~~v~i~~p--~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G 292 (441)
-+-+|..| +--+|+. +|+..++++.++|++||+++|.||+-..|...+......+..-.|| +-+++|.++..=
T Consensus 215 IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PD----i~~~aKGLT~GY 290 (449)
T COG0161 215 IAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPD----ILCLAKGLTGGY 290 (449)
T ss_pred EEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCC----eeeecccccccc
Confidence 44466677 4447766 5778999999999999999999999887776654332333332455 335789886444
Q ss_pred ceeEEEEeeccccccCCchhHHHHHHH-----HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 013521 293 VRLGWTVVPEELRYSNGYPVIKDFNRI-----VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQS 367 (441)
Q Consensus 293 ~r~G~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 367 (441)
+.+|.+++.+++ .+.+..- ....+.+.++++..++++.|+--. -+.+.++.++.-.++.+.|.+
T Consensus 291 ~Pl~a~l~~~~I--------~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e---~e~l~~~~~~~~~~l~~~L~~ 359 (449)
T COG0161 291 LPLSAVLTSDRI--------YEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILE---EEDLLERVAEIGAYLQAGLQA 359 (449)
T ss_pred hhhHhHhhhHHH--------HHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHH
Confidence 556666666655 3333321 222344577888887777776211 134445555666666666665
Q ss_pred -C-CCeee--CCCCceEEEEEcCC-CC--------hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHH
Q 013521 368 -L-GLKVN--GGKNAPYVWVQFPG-SS--------SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISE 432 (441)
Q Consensus 368 -~-g~~~~--~~~~~~~~~~~~~~-~~--------~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~ 432 (441)
+ +-... .-.-|...-+++.. .. -...+...+.++|+.++|.. ..+=++ +..+++++++
T Consensus 360 ~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g-------~~i~~~PPliit~~eid~ 432 (449)
T COG0161 360 ALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG-------DVIYLMPPLIITREEIDE 432 (449)
T ss_pred hcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC-------CEEEEcCCccCCHHHHHH
Confidence 2 11111 11246666677742 11 12344444555699999952 134344 4558999999
Q ss_pred HHHHHHhhC
Q 013521 433 ACRRLKNFL 441 (441)
Q Consensus 433 ~l~~l~~~l 441 (441)
+++++.+++
T Consensus 433 l~~~l~~al 441 (449)
T COG0161 433 LVDALREAL 441 (449)
T ss_pred HHHHHHHHH
Confidence 999998764
No 362
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.32 E-value=1.2e-09 Score=107.73 Aligned_cols=278 Identities=13% Similarity=0.159 Sum_probs=177.6
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC-CCcEEEcCCcHHHHHH-HHH---hcC--C
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE-GDEIFISDGAQSDISR-LQM---LLG--S 157 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~I~~t~G~~~al~~-l~~---l~~--~ 157 (441)
.+++...+++...+.. ........++..++.+.+..|+.+.++.+ .-.=.+|+|+|+++.+ +.. ... .
T Consensus 73 ~~~~~a~~~~~~~~~~-----nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~ 147 (460)
T COG0076 73 RVPPVAAELLVSALNK-----NLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRA 147 (460)
T ss_pred CCHHHHHHHHHHHHhh-----cCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHh
Confidence 3556677777777653 22222223488899999999998877764 3456799999998764 321 111 1
Q ss_pred ---C------CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCcc--EEEEc
Q 013521 158 ---N------VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTD--IIFFC 221 (441)
Q Consensus 158 ---g------d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~--~v~i~ 221 (441)
+ -.|+++.-.|.++...+..+| .++..++++.. +...|..+ ...+. +|+-+
T Consensus 148 ~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG------------~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~ 214 (460)
T COG0076 148 LAESGKPGGKPNIVCSETAHFSFEKAARYLG------------LGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGT 214 (460)
T ss_pred hhcccccCCCCeEEecCcchhHHHHHHHHhC------------CCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEE
Confidence 1 169999999999999999999 57777777763 33333221 12222 36667
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC-CCCCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD-PSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
-.+.+||.+=+ +++|.++|+++++++.+|.+|+.+... ..+...+. .+.+...-+.-+++|.. .+...+||++.
T Consensus 215 aGtT~~G~iDd---i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~-f~l~~vdSIt~d~HK~g-~aP~~~G~il~ 289 (460)
T COG0076 215 AGTTDTGSIDD---IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWD-FGLEGVDSITVDGHKYG-LAPIGCGVVLF 289 (460)
T ss_pred ecCCCCCccCC---HHHHHHHHHHcCCcEEEEccccceeecccCccchhh-cCCCCceEEEECccccc-CCCCCceEEEE
Confidence 88999998866 999999999999999999999976542 11111111 12233345677899998 48889999999
Q ss_pred eccc-cccCCchhHHHHHH---HHhhhcCCCcHH--HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceee
Q 013521 301 PEEL-RYSNGYPVIKDFNR---IVCTCFNGASNI--VQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG-LKVN 373 (441)
Q Consensus 301 ~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~ 373 (441)
+++. +.+ .......+.. ....... .+.. ...+..+.+...+.+.++++.++..+.++++.+.|++.+ +++.
T Consensus 290 rd~e~l~~-~~~~~~~yl~~~~~~~~ti~-~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~ 367 (460)
T COG0076 290 RDEEALRR-ILIFADYYLPGGGIPNFTIL-GSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELV 367 (460)
T ss_pred ECHHHhhh-hhhcccccCCCCCcCceeEe-eccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEee
Confidence 8873 211 0000000000 0000011 1111 122223333334455668888888899999999999985 8887
Q ss_pred CCCCceEEEEEcCC
Q 013521 374 GGKNAPYVWVQFPG 387 (441)
Q Consensus 374 ~~~~~~~~~~~~~~ 387 (441)
.++..+.+.++++.
T Consensus 368 ~~p~l~~V~fr~~~ 381 (460)
T COG0076 368 NEPELPIVAFRLKD 381 (460)
T ss_pred cCCccceEEEEcCC
Confidence 76788889999863
No 363
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.32 E-value=1.7e-10 Score=114.20 Aligned_cols=324 Identities=15% Similarity=0.122 Sum_probs=166.1
Q ss_pred CCCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCC-CCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcH
Q 013521 70 PDARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYG-AEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQ 145 (441)
Q Consensus 70 ~~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~ 145 (441)
.++..||+..|- ..+ ..+|.+.+++.+.+.... .+. +.....++.+.+++.. + ..+.+.++++++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~------~~~~~~~~~~~la~~l~~~~----p-~~~~v~f~~sGs 114 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC------NFTRPSAIELDAAESFLELI----D-GADMVKFCKNGS 114 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc------CCCCCCHHHHHHHHHHHHhC----C-ccceEEEecCHH
Confidence 356788887664 222 367899999999887532 122 2222223445554432 2 136899999999
Q ss_pred HHHHH-H--HHhcCCCCEEEEe-CCCchhhHhHHHHhccccc---cccccCccceeEEeecCCCCCccCCCCCC-CCccE
Q 013521 146 SDISR-L--QMLLGSNVTVAVQ-DPSFPAYIDTSVIVGQAGK---FLKETGKYRNIVYMNCRPENNFFPDLSTT-SRTDI 217 (441)
Q Consensus 146 ~al~~-l--~~l~~~gd~Vlv~-~p~y~~~~~~~~~~g~~~~---~~~~~~~~~~v~~v~~~~~~~~~~~~~~~-~~~~~ 217 (441)
+|... + .........|+.. .-+|.+..... .|.... .... ....+..++..+-..+...++.. .++.+
T Consensus 115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~--~g~~~~~~~~~~~--~~~~~~~~~~~d~~~l~~~l~~~~~~~aa 190 (431)
T PRK06209 115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWF--IGTTPMSAGIPAS--VSALTVTFRYNDIASLEALFEDHPGRIAC 190 (431)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeccCccccccccc--cccCCCCCCCChh--HhccccccCCCCHHHHHHHHHhCCCCEEE
Confidence 99886 4 2222223455554 33443321111 011000 0000 00011112211100000001111 24445
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccc-cCCCcceeEEEecCCcccCCccceeE
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYE-IPGAREVAIEISSFSKFAGFTGVRLG 296 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~~~~G~r~G 296 (441)
|+ ..|- .|...+.+.+++|.++|++||+++|.||++..+... ...... +.-.+| +.+++|.+| .|+.+|
T Consensus 191 vi-~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~--~~g~~~~~gv~PD----i~t~gK~lg-gG~p~~ 260 (431)
T PRK06209 191 VI-LEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH--MRGAQKLYGIVPD----LSCFGKALG-NGFAVS 260 (431)
T ss_pred EE-Eccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC--cchhhHHhCCCcc----eeeehhhhc-CCcccE
Confidence 44 4552 344678899999999999999999999998765322 111221 221234 467899998 789999
Q ss_pred EEEeeccccccCCchhHHH--H-----HH-HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH--
Q 013521 297 WTVVPEELRYSNGYPVIKD--F-----NR-IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQ-- 366 (441)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~--~-----~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~-- 366 (441)
.++++++++ +. + .. .......+.+++...++.+.++.-.. +...++.+++.+++.+.|+
T Consensus 261 av~~~~~i~--------~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~~ 329 (431)
T PRK06209 261 ALAGKREYM--------ELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD---EDVIERLHEQGAKLAAGVNEA 329 (431)
T ss_pred EEEEHHHHH--------hhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHH
Confidence 999988764 21 1 00 00122333556666666666652111 1233444444445544444
Q ss_pred --hCCCeee-CCCCceEEEEEc--C--CCChH----HHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeecCHHHHHHHHH
Q 013521 367 --SLGLKVN-GGKNAPYVWVQF--P--GSSSW----DVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFGHREYISEACR 435 (441)
Q Consensus 367 --~~g~~~~-~~~~~~~~~~~~--~--~~~~~----~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~~~~~~~~~l~ 435 (441)
++++... ...+.+..+.-+ . +.... .+...+++ +||.+.| ++|+...++++++++++
T Consensus 330 ~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p~-----------l~is~~ht~~dId~~l~ 397 (431)
T PRK06209 330 AAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMPS-----------LVVSYAHGDADIERTID 397 (431)
T ss_pred HHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCccccc-----------ccccccCCHHHHHHHHH
Confidence 3444321 112322222211 1 11111 34455554 5997622 57776779999999999
Q ss_pred HHHhhC
Q 013521 436 RLKNFL 441 (441)
Q Consensus 436 ~l~~~l 441 (441)
+|.+++
T Consensus 398 ~l~~~l 403 (431)
T PRK06209 398 AVHGAL 403 (431)
T ss_pred HHHHHH
Confidence 998763
No 364
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.27 E-value=7.2e-09 Score=108.65 Aligned_cols=206 Identities=13% Similarity=0.101 Sum_probs=128.2
Q ss_pred CccEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCC
Q 013521 214 RTDIIFFCSP--NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGF 290 (441)
Q Consensus 214 ~~~~v~i~~p--~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~ 290 (441)
++.+++ ..| +.-.|.+ .+++.++++.++|++||+++|.||++..|...+.......+.-.|| |-+++|.++
T Consensus 584 ~iAAvI-~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PD----Ii~~gKgLt- 657 (817)
T PLN02974 584 HIAALI-IEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPD----IACYAKLLT- 657 (817)
T ss_pred CEEEEE-EeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCC----EEeeccccc-
Confidence 455544 566 5666876 4789999999999999999999999998765553222222332455 445899998
Q ss_pred cc-ceeEEEEeeccccccCCchhHHHHHH------HHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHH
Q 013521 291 TG-VRLGWTVVPEELRYSNGYPVIKDFNR------IVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIV 362 (441)
Q Consensus 291 ~G-~r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~ 362 (441)
.| +.+|.+++++++. +.+.. +....+++.++++.+++.+.|+.-.. +...++.+.-++..+.+.
T Consensus 658 gG~~Plaa~l~~~~I~--------~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~ 729 (817)
T PLN02974 658 GGLVPLAATLATEEVF--------EAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWD 729 (817)
T ss_pred CCCCccEEEEEcHHHH--------HhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 89 6999999998873 33321 11233455788888888877762111 112233333333333333
Q ss_pred HH----HHhCC-CeeeCCCCceEEEEEcCCC-C--------hHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecC
Q 013521 363 DA----FQSLG-LKVNGGKNAPYVWVQFPGS-S--------SWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGH 426 (441)
Q Consensus 363 ~~----L~~~g-~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~ 426 (441)
+. |.++. +.-.. .-|.++-+++... . ...+.+.++.++||.++|. .+.||+. ...+
T Consensus 730 ~~l~~~l~~~p~V~~VR-g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-------Gnvi~l~pP~~i~ 801 (817)
T PLN02974 730 EELVRAISSLPNVERVV-SLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-------GNVVYLMCGPTTS 801 (817)
T ss_pred HHHHHHHhhCCCeeEEE-eeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-------CCEEEEeCCCCCC
Confidence 33 34342 22122 2466666776421 1 1234555552569999883 1478875 4568
Q ss_pred HHHHHHHHHHHHhhC
Q 013521 427 REYISEACRRLKNFL 441 (441)
Q Consensus 427 ~~~~~~~l~~l~~~l 441 (441)
++++++++++|.+.|
T Consensus 802 ~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 802 PETCTRLLRKVYRRL 816 (817)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
No 365
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.25 E-value=1.1e-11 Score=103.38 Aligned_cols=62 Identities=21% Similarity=0.278 Sum_probs=55.3
Q ss_pred CCCCCcCcHHHHHHHHHHHhhh----CCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchh
Q 013521 109 GYGAEQGNMALRTAIADKFYKD----MGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPA 170 (441)
Q Consensus 109 ~Y~~~~g~~~lr~~ia~~l~~~----~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~ 170 (441)
.|++..|..+||+++|+|+.+. ..+++++|++|+|+++++.+ ++.+++|||.|++++|+|++
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 4888889999999999999763 34789999999999999998 57888999999999999974
No 366
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.25 E-value=1.7e-10 Score=106.13 Aligned_cols=269 Identities=17% Similarity=0.211 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCC-CcCcHHHHHHHHHHHhhhCCCCCCcEE---EcCCcHHHHHH-HHHhcCCCCEEE
Q 013521 88 DIITSAMAEHAFALSTVKGYKGYGA-EQGNMALRTAIADKFYKDMGIEGDEIF---ISDGAQSDISR-LQMLLGSNVTVA 162 (441)
Q Consensus 88 ~~~~~al~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~I~---~t~G~~~al~~-l~~l~~~gd~Vl 162 (441)
..+++|+++.--......+..+|+- +.|-..|.+..|+. ++.+. .++ ++|| |+||.+ |+.+++|||+.+
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~v----fgaE~-ALVRpq~vSG-THAi~~~Lfg~LrpGD~ll 100 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADV----FGAED-ALVRPQFVSG-THAIALALFGVLRPGDELL 100 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHH----CT-SE-EEEETTS-SH-HHHHHHHHHHH--TT-EEE
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHH----hCchh-hhhcccccch-HHHHHHHHHhcCCCCCeEE
Confidence 4567777764332222344445653 34555555555555 45432 222 4454 567776 999999999998
Q ss_pred Ee-CCCchhhHhHHHHhcc-ccccccccCccceeEEeecCCCCCccCCCC-C--CCCccEEEEc-CCCCccccCCCHHHH
Q 013521 163 VQ-DPSFPAYIDTSVIVGQ-AGKFLKETGKYRNIVYMNCRPENNFFPDLS-T--TSRTDIIFFC-SPNNPTGHAATWQQL 236 (441)
Q Consensus 163 v~-~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~-~--~~~~~~v~i~-~p~NPtG~~~~~~~~ 236 (441)
.. -.-|....+.+...|. .|-+...+ +....+++.+++.++.+.. + .+++|+++|. +..+-+--.++.+++
T Consensus 101 ~~tG~PYDTL~~VIG~~g~~~GSL~e~G---i~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I 177 (403)
T PF06838_consen 101 SITGKPYDTLEEVIGIRGNGPGSLKEFG---IKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEI 177 (403)
T ss_dssp ESSSS--CCHHHHHTSSSSSSSSTGGGT----EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHH
T ss_pred EcCCCchhhHHHHhCCCCCCCCChHHhC---ceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHH
Confidence 64 3456666666655553 34444444 4777888887665543311 1 3789999997 666666677899999
Q ss_pred HHHHHHHHH--cCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccce--eEEEEeeccccccCCchh
Q 013521 237 KKLVEFAKA--NGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVR--LGWTVVPEELRYSNGYPV 312 (441)
Q Consensus 237 ~~i~~~a~~--~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r--~G~l~~~~~~~~~~~~~~ 312 (441)
+++++++++ .++++++|.+|++|+-...|..+ +-.++.+|+-|..| .|+= -||+++.++++
T Consensus 178 ~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~v-------GADl~aGSLIKNpG-GgiAptGGYIaGr~~lV------- 242 (403)
T PF06838_consen 178 KEIIKFVKEINPDVIIFVDNCYGEFVETQEPTEV-------GADLMAGSLIKNPG-GGIAPTGGYIAGRKDLV------- 242 (403)
T ss_dssp HHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGG-------T-SEEEEETTSGGG-TTT-SS-EEEEESHHHH-------
T ss_pred HHHHHHHHhhCCCeEEEEeCCcceeccccCcccc-------chhheeccceeCCC-CCccCcCCEEechHHHH-------
Confidence 999999996 47999999999999876555433 12399999999877 5543 38999999985
Q ss_pred HHHHHHHHhhhcCC----CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCc----eEEEEE
Q 013521 313 IKDFNRIVCTCFNG----ASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNA----PYVWVQ 384 (441)
Q Consensus 313 ~~~~~~~~~~~~~~----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----~~~~~~ 384 (441)
++.....+....+ .+.-... .++ .++-.-..+..+--+-.-+....++++|+++.|.++. ..-.+.
T Consensus 243 -e~~a~RLTaPGiG~e~G~t~~~~R---~~~--QGlFlAP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~ 316 (403)
T PF06838_consen 243 -ERAAYRLTAPGIGKEVGATLGTNR---LMF--QGLFLAPHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIE 316 (403)
T ss_dssp -HHHHHHHS-TTTGGGSS--TTTHH---HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE
T ss_pred -HHHHhhhcCCccccccccCcchHH---HHH--hHHhhchHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEE
Confidence 4433322222111 1110010 111 1111123344444445566777788889999775443 346666
Q ss_pred cC
Q 013521 385 FP 386 (441)
Q Consensus 385 ~~ 386 (441)
+.
T Consensus 317 l~ 318 (403)
T PF06838_consen 317 LG 318 (403)
T ss_dssp -S
T ss_pred CC
Confidence 65
No 367
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.22 E-value=3.4e-09 Score=104.09 Aligned_cols=232 Identities=16% Similarity=0.171 Sum_probs=139.7
Q ss_pred CcCc-HHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCc
Q 013521 113 EQGN-MALRTAIADKFYKDMGIEGDEIFISDGAQSDISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGK 190 (441)
Q Consensus 113 ~~g~-~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~ 190 (441)
+.|. .+..+..|+.+ +.+ .--+++||++.++.+ +++++.+||.|+++.++|-+.....-+.|.
T Consensus 68 p~G~i~eAqe~aA~~f----gAd-~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa---------- 132 (557)
T COG1982 68 PEGPIKEAQELAARVF----GAD-HTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGA---------- 132 (557)
T ss_pred CCccHHHHHHHHHHHh----CCC-ceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCC----------
Confidence 3344 44444444443 543 478899999999987 789999999999999999999888888884
Q ss_pred cceeEEeecCCCCCcc-----------CCCCCCCCc-cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccc
Q 013521 191 YRNIVYMNCRPENNFF-----------PDLSTTSRT-DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA 258 (441)
Q Consensus 191 ~~~v~~v~~~~~~~~~-----------~~~~~~~~~-~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~ 258 (441)
..+++....+..+. ..+.+.+.. |+++++||.. -|+++. .++|+++++..++++.+|+++..
T Consensus 133 --~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~ 206 (557)
T COG1982 133 --TPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPA 206 (557)
T ss_pred --ceEEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcc
Confidence 55555443322111 111123445 8889877766 699999 88899999999999999999884
Q ss_pred cccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecc-ccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHH
Q 013521 259 YITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEE-LRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLA 337 (441)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 337 (441)
........+-... ....++...|.+|.++ +.....++..++. .++ .+++.........+.+.....|.+.
T Consensus 207 ~~~~~~~l~~~~~--~~~~~~~tqS~HK~l~-alSQaS~iHv~~~~~~~------~~r~nea~~~h~STSPsY~l~ASlD 277 (557)
T COG1982 207 HFDFSPMLPESAL--NGGADFVTQSTHKLLA-ALSQASMIHVKDGRAVN------HERFNEALMMHQSTSPSYPLMASLD 277 (557)
T ss_pred cccccccCcchhh--hcCceEEEechhhhhh-hhhhhHHHhhCCCccCC------HHHHHHHHHHHccCCchHHHHHHHH
Confidence 3222111111122 1345799999999985 5445556666652 321 2445443333322223222222222
Q ss_pred h----cCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeC
Q 013521 338 C----LSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNG 374 (441)
Q Consensus 338 ~----l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 374 (441)
. ....+....+...+..-+.++.+.+.+++. ++.+..
T Consensus 278 ~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~ 319 (557)
T COG1982 278 VARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQ 319 (557)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc
Confidence 2 222232333333455555666666666665 454433
No 368
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.22 E-value=7.6e-11 Score=112.96 Aligned_cols=274 Identities=13% Similarity=0.124 Sum_probs=157.4
Q ss_pred CCCeEEeCCCC--CCC-CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHH
Q 013521 71 DARLIRLGIGD--TTQ-PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSD 147 (441)
Q Consensus 71 ~~~~i~l~~g~--~~~-~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~a 147 (441)
++.++|+..+. ..+ .-+|.+.+++++.+..... ........+.+.++++.+.+..+-..+.+++++++++|
T Consensus 15 G~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~------~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseA 88 (339)
T PF00202_consen 15 GREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNY------VSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEA 88 (339)
T ss_dssp SEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSS------CSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHH
T ss_pred CCEEEECCCCccceecCCCccccchhHHHHhhhccc------ccccceeccchhhhhhhhhhccccccceeeeccCchHH
Confidence 45678886542 222 2568899999998876421 11122344566677777765444456799999999999
Q ss_pred HHH-H-HHh------c-CCCCEEEEeCCCchhhHhHHHHhcccccc-ccccCccceeEEeecCCCCC----------ccC
Q 013521 148 ISR-L-QML------L-GSNVTVAVQDPSFPAYIDTSVIVGQAGKF-LKETGKYRNIVYMNCRPENN----------FFP 207 (441)
Q Consensus 148 l~~-l-~~l------~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~-~~~~~~~~~v~~v~~~~~~~----------~~~ 207 (441)
++. + +.. . .....|+....+|++.............+ ......+..+..+|...... +..
T Consensus 89 ve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 168 (339)
T PF00202_consen 89 VEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEE 168 (339)
T ss_dssp HHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHH
Confidence 986 4 222 1 24468999999999865444443221110 01111112456666643211 000
Q ss_pred CCC--CCCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEec
Q 013521 208 DLS--TTSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283 (441)
Q Consensus 208 ~~~--~~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S 283 (441)
.+. ..+++.+++ ..| +.-.|.. .+.+.+++|.++|++||+++|.||++..+...+.......+.-.|| ++ +
T Consensus 169 ~~~~~~~~~iaavi-vEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PD--iv--~ 243 (339)
T PF00202_consen 169 LIAALNADEIAAVI-VEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPD--IV--T 243 (339)
T ss_dssp HHHHHHGGGEEEEE-EESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSS--EE--E
T ss_pred HHHhhcCCcEEEEE-EeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCc--cc--c
Confidence 000 124455544 466 4445644 5788999999999999999999999998765554332333332455 33 3
Q ss_pred CCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Q 013521 284 FSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVD 363 (441)
Q Consensus 284 ~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 363 (441)
++|.++ .|+.+|.+++++++. +.+.......++..++++..++.+.|+.-.. +++.+..++..+++.+
T Consensus 244 ~gK~l~-gG~p~sav~~~~~i~--------~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~---~~~~~~~~~~g~~l~~ 311 (339)
T PF00202_consen 244 FGKGLG-GGLPISAVLGSEEIM--------EAFQPGSHGSTFGGNPLSCAAALATLEILEE---EDLLERVRELGERLRE 311 (339)
T ss_dssp EEGGGG-TTSSEEEEEEEHHHH--------TTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred cccchh-hhhhcccccccchhh--------ccccccccccccccchHhhhhhhhHHHhhcc---HHHHHHHHHHHHHHHH
Confidence 679998 889999999998874 2221111334444677888878877762111 2233444444555555
Q ss_pred HHHh
Q 013521 364 AFQS 367 (441)
Q Consensus 364 ~L~~ 367 (441)
.|++
T Consensus 312 ~L~~ 315 (339)
T PF00202_consen 312 GLRE 315 (339)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 369
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.19 E-value=1.5e-08 Score=106.49 Aligned_cols=337 Identities=12% Similarity=0.101 Sum_probs=196.3
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCC-----CcCcHHHHHHHHHHHhh
Q 013521 55 FPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGA-----EQGNMALRTAIADKFYK 129 (441)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l~~ 129 (441)
..++.+.......++.. -..-++.|.++.-.|+.+.+.+.+ +. ..+..|+| .+|.-+..=.+...+.+
T Consensus 48 E~e~~~~~~~la~~N~~-~~~fig~G~y~~~~p~~i~r~v~~---~p---~~~TaytPyQ~EisQG~Le~l~e~Qt~i~e 120 (939)
T TIGR00461 48 EYEALAHLKKIASKNHK-FKSYIGMGYYGTILPPVIQRNLLE---NP---GWYTAYTPYQPEISQGRLEALLNFQTVVSD 120 (939)
T ss_pred HHHHHHHHHHHHhcCCC-ccccCCCCcCCCcCChHHHHHHHh---Cc---hhhhcCCCCChhhhhHHHHHHHHHHHHHHH
Confidence 44444544444444322 113346666666677776655554 21 12344544 23444433333333444
Q ss_pred hCCCCCCcEEEcCCcHHHHHH-HHHh-c--CCCCEEEEeCCCchhhHhHHH----HhccccccccccCccceeEEeecCC
Q 013521 130 DMGIEGDEIFISDGAQSDISR-LQML-L--GSNVTVAVQDPSFPAYIDTSV----IVGQAGKFLKETGKYRNIVYMNCRP 201 (441)
Q Consensus 130 ~~~~~~~~I~~t~G~~~al~~-l~~l-~--~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~v~~v~~~~ 201 (441)
..|.+..|.-+..+++++.+. +++. . +++++|++++-.||.....++ ..| ++++.++.+
T Consensus 121 LtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g------------~~v~~~~~~- 187 (939)
T TIGR00461 121 LTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFG------------IEVIVVDCS- 187 (939)
T ss_pred HHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcC------------cEEEEEcHH-
Confidence 457888888899999988875 4443 2 234799999999998876665 344 477777542
Q ss_pred CCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEE
Q 013521 202 ENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEI 281 (441)
Q Consensus 202 ~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i 281 (441)
. +...-++.++++.+|++ +|.+.+ +++|++.++++|.+++++--..-+.. ..+..++ +-+|.+
T Consensus 188 --~----l~~~~~~~~v~~q~Pn~-~G~ied---~~~i~~~~h~~gal~~~~ad~~al~l---l~~Pge~----GaDi~v 250 (939)
T TIGR00461 188 --D----IKKAVDVFGCLLQYPAT-DGSILD---YKQLIDALHSHKSLVSVAADLMALTL---LTPPGHY----GADIVL 250 (939)
T ss_pred --H----HhhcCCEEEEEEECCCC-CeEEec---HHHHHHHHHHcCCEEEEEechHHhCC---cCCHHHc----CCcEEe
Confidence 1 22111466777778865 898874 99999999999999998532221111 1111222 223666
Q ss_pred ecCCcccCC----ccceeEEEEeecccccc------------C---Cc-----hhHHHHHHHHhhhcCCCcHHHHHHHHH
Q 013521 282 SSFSKFAGF----TGVRLGWTVVPEELRYS------------N---GY-----PVIKDFNRIVCTCFNGASNIVQAGGLA 337 (441)
Q Consensus 282 ~S~SK~~~~----~G~r~G~l~~~~~~~~~------------~---~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~ 337 (441)
++ +|.||+ .|.-.|++.+++++++. . .. ...+.+++.+..+..+++........+
T Consensus 251 g~-~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~ 329 (939)
T TIGR00461 251 GS-SQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVAS 329 (939)
T ss_pred eC-CCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHH
Confidence 54 344443 35558898888876521 0 00 001112233332222222222111111
Q ss_pred -hcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE--EEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCC
Q 013521 338 -CLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY--VWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPG 414 (441)
Q Consensus 338 -~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~ 414 (441)
.+.-.+-+.+++..++...+..++.+.|++.|+++..+ .+| +.++++..+..++.++++++ ||.++..
T Consensus 330 ~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~fF~~~~v~~~~~~~~~i~~~~~~~-gi~l~~~------ 400 (939)
T TIGR00461 330 SYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK--TWFDTLTVKVGNGISSELLKAAEEF-NINLRAV------ 400 (939)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--CccceEEEEeCCCCHHHHHHHHHHC-CCeeeec------
Confidence 12223446678888888999999999999999887653 344 44555433566777776655 9997652
Q ss_pred CCCeEEEEe--ecCHHHHHHHHHHHH
Q 013521 415 GNEHIRVSA--FGHREYISEACRRLK 438 (441)
Q Consensus 415 ~~~~iRls~--~~~~~~~~~~l~~l~ 438 (441)
.++.+++|+ .+++++++.+++.+.
T Consensus 401 ~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 401 DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 245899997 458999999999884
No 370
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.18 E-value=9.1e-09 Score=95.75 Aligned_cols=275 Identities=15% Similarity=0.168 Sum_probs=158.8
Q ss_pred CCCCCeEEeCCCCC-C--CCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcH
Q 013521 69 HPDARLIRLGIGDT-T--QPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQ 145 (441)
Q Consensus 69 ~~~~~~i~l~~g~~-~--~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~ 145 (441)
..+.+.||+..+-- . -+..|++.+++.+...+++ .....|...+ ..++.+.+.+.+.+ -+++.|.+.++++
T Consensus 53 ~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~--hs~~~~~t~e-av~l~~~l~~~~~~---~~~~rvff~nsGT 126 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLG--HSSNGYFTLE-AVELEEVLSAVLGK---GSAERVFFCNSGT 126 (433)
T ss_pred CCcceeeeeccceeccccCCCCHHHHHHHHHHHhhhe--eccCccccHH-HHHHHHHHHhcccC---CCccEEEEecCCc
Confidence 34567888775531 1 2357899999999888775 2333332222 34444444444322 2789999999999
Q ss_pred HHHHH-H-HH--hcCCC---C--EEEEeCCCchhhHhHH-HHhcccc--c-cccccCccceeEEeecCCCCCccCCCCC-
Q 013521 146 SDISR-L-QM--LLGSN---V--TVAVQDPSFPAYIDTS-VIVGQAG--K-FLKETGKYRNIVYMNCRPENNFFPDLST- 211 (441)
Q Consensus 146 ~al~~-l-~~--l~~~g---d--~Vlv~~p~y~~~~~~~-~~~g~~~--~-~~~~~~~~~~v~~v~~~~~~~~~~~~~~- 211 (441)
+|... | ++ ....+ + .++....+|++-.-.+ ...+... . +.+.. -+++....++...+..-++.
T Consensus 127 eAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~---p~v~~~~ynd~t~l~k~~~~h 203 (433)
T KOG1401|consen 127 EANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIA---PDVVTAEYNDSTALEKLFESH 203 (433)
T ss_pred HHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCC---CceeecccCCHHHHHHHHHhC
Confidence 99886 4 22 22222 2 3888888998743222 2222110 0 00000 01111111110000000111
Q ss_pred CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCcccccCCCcceeEEEecCCcc
Q 013521 212 TSRTDIIFFCSP-NNPTGHA-ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS--PRSIYEIPGAREVAIEISSFSKF 287 (441)
Q Consensus 212 ~~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~--~~~~~~~~~~~~~~i~i~S~SK~ 287 (441)
.....+|+ ..| +---|.. .+++.++.|...|+++|+++|.||+...|..-+. ...+.. -.|| |.++.|.
T Consensus 204 ~~~IaAVI-vEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~--~~PD----I~t~aK~ 276 (433)
T KOG1401|consen 204 KGEIAAVI-VEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFG--VTPD----ITTVAKP 276 (433)
T ss_pred CCceEEEE-EecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhC--cCCc----ceeehhh
Confidence 12355555 466 5556654 6889999999999999999999999987655442 112222 2345 5678999
Q ss_pred cCCccceeEEEEeeccccccCCchhHHHHHH---HHhhhcCCCcHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHHHHHH
Q 013521 288 AGFTGVRLGWTVVPEELRYSNGYPVIKDFNR---IVCTCFNGASNIVQAGGLACLSPDGF-QALRTVIDYYKENAKIIVD 363 (441)
Q Consensus 288 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~ 363 (441)
++ .|+.+|..++++++. +.+.. +......+.++++..++...++.-.. ++++++.++-+..++.+.+
T Consensus 277 L~-gGlPigA~~v~~kV~--------~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 277 LG-GGLPIGATGVRDKVA--------EMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDE 347 (433)
T ss_pred cc-CCceeEEEeehHHHH--------hhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 98 999999999988873 33321 12234455778888888777763322 4556666666666666666
Q ss_pred HHHhC
Q 013521 364 AFQSL 368 (441)
Q Consensus 364 ~L~~~ 368 (441)
.+.+.
T Consensus 348 ~~~~~ 352 (433)
T KOG1401|consen 348 YLKKT 352 (433)
T ss_pred HhccC
Confidence 66654
No 371
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.14 E-value=4.4e-08 Score=94.04 Aligned_cols=323 Identities=16% Similarity=0.149 Sum_probs=187.0
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH-
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL- 151 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l- 151 (441)
-+|||-+......+.+..+++|.. + + -.|+.++....|.+.+++.+ |. +.++.|.-+..+-.++
T Consensus 42 V~IDLrSDTgT~apS~~m~aAM~~-----G--D--D~Y~gdpSv~~Lee~vael~----G~--E~alpthqGRgaE~Il~ 106 (467)
T TIGR02617 42 VFIDLLTDSGTGAVTQSMQAAMMR-----G--D--EAYSGSRSYYALAESVKNIF----GY--QYTIPTHQGRGAEQIYI 106 (467)
T ss_pred eEEECccCCCCCCCCHHHHHHHHc-----C--C--cccccCchHHHHHHHHHHHh----CC--ceEEECCCCchHHHHHH
Confidence 468888776654566777777775 1 1 24777788899999999986 43 4577786667666664
Q ss_pred HHhcC-CCCEEEEeCC----Cchh----hHhHHHHhccccccccccCccceeEEeec----------CCCCCccCC-CCC
Q 013521 152 QMLLG-SNVTVAVQDP----SFPA----YIDTSVIVGQAGKFLKETGKYRNIVYMNC----------RPENNFFPD-LST 211 (441)
Q Consensus 152 ~~l~~-~gd~Vlv~~p----~y~~----~~~~~~~~g~~~~~~~~~~~~~~v~~v~~----------~~~~~~~~~-~~~ 211 (441)
..+++ |||++++..+ .+.. ....+...| ..++.++. ...++++++ ++.
T Consensus 107 ~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G------------~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~ 174 (467)
T TIGR02617 107 PVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQING------------CTARNVYTKEAFDTGVRYDFKGNFDLEGLER 174 (467)
T ss_pred HhhcccccccccccccccccceEEEEecchHHHHHcC------------ceeecccchhhcccccCCCCCCCcCHHHHHH
Confidence 56677 7888886554 1211 123344455 23333321 112333222 111
Q ss_pred ---C---CCccEEEEcCCCC-ccccCCCHHHHHHHHHHHHHcCcEEEEcccccc-ccc-------CCCCCccccc----C
Q 013521 212 ---T---SRTDIIFFCSPNN-PTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA-YIT-------DPSPRSIYEI----P 272 (441)
Q Consensus 212 ---~---~~~~~v~i~~p~N-PtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~-~~~-------~~~~~~~~~~----~ 272 (441)
. .+...+...--+| --|+++|.+.++++.++|++||+.++.|.+--. ..+ .....++..+ .
T Consensus 175 ~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~ 254 (467)
T TIGR02617 175 GIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETY 254 (467)
T ss_pred HHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhh
Confidence 1 1222322221134 347899999999999999999999999986432 111 0112344333 1
Q ss_pred CCcceeEEEecCCcccCCc-cceeEEEEeeccccccCCchhHHHHHHHHhh--------hcCCCcHHHHHHHHHhcCCC-
Q 013521 273 GAREVAIEISSFSKFAGFT-GVRLGWTVVPEELRYSNGYPVIKDFNRIVCT--------CFNGASNIVQAGGLACLSPD- 342 (441)
Q Consensus 273 ~~~~~~i~i~S~SK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~a~~~~l~~~- 342 (441)
...| .+.-|+||.++.| | |+++++++.+ .+.+...+.. ++.+.+.-...|.+.=|.+.
T Consensus 255 ~~aD--svt~slsKglgApvG---g~Lag~d~~~-------~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~ 322 (467)
T TIGR02617 255 KYAD--MLAMSAKKDAMVPMG---GLLCFKDDSF-------FDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM 322 (467)
T ss_pred ccCC--EEEEEcCCCCCCccc---ceEEecchhH-------HHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcc
Confidence 2223 5566899999876 4 6778877621 1122222221 12233433344333233322
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcC---------CCChHHHHHHHHHhcCeEEeC-CCCc-
Q 013521 343 GFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFP---------GSSSWDVFAEILEKTHILTIP-GSGF- 411 (441)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ll~~~gi~v~p-g~~f- 411 (441)
..+++..+ -...++|.+.|.+.|+.+.. .+|.-++++.. ......+..+|-.+.||--.- |+..
T Consensus 323 ~~~yl~~r----i~qv~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~ 397 (467)
T TIGR02617 323 NLDWLAYR----INQVQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLL 397 (467)
T ss_pred cHHHHHHH----HHHHHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceec
Confidence 11333333 34567888999999998877 78888888642 134567888888888886443 3321
Q ss_pred C--CC-------CCCeEEEEee---cCHHHHHHHHHHHHh
Q 013521 412 G--PG-------GNEHIRVSAF---GHREYISEACRRLKN 439 (441)
Q Consensus 412 ~--~~-------~~~~iRls~~---~~~~~~~~~l~~l~~ 439 (441)
+ +. .-..+|+++- -+.+.++...++|..
T Consensus 398 ~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~ 437 (467)
T TIGR02617 398 GRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKH 437 (467)
T ss_pred ccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHH
Confidence 1 11 1257999972 266777777777654
No 372
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.13 E-value=1.3e-08 Score=97.99 Aligned_cols=342 Identities=17% Similarity=0.183 Sum_probs=169.0
Q ss_pred HHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCC--CcCcHHHHHHHHHHHhhhCCCC
Q 013521 57 EISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGA--EQGNMALRTAIADKFYKDMGIE 134 (441)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~ 134 (441)
++.+.......+... ..--++.|..+.-.|+.+.+.+.+ +......+.-|+| .+|..+..-.+..++.+..|.+
T Consensus 51 e~~r~~~~la~kN~~-~~~fiG~G~y~~~~P~~i~~~i~~---~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmd 126 (429)
T PF02347_consen 51 ELLRHLERLASKNKS-YTSFIGAGSYTHYVPAVIDRNILS---RPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMD 126 (429)
T ss_dssp HHHHHHHHHHTTS---TTS---CTTT-----HHHHH-HHC---CHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhcCCC-CCccccccccCceeChhhcCcccc---ChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 344444444444322 222345555555455654442322 2111123334444 4555555445555555544665
Q ss_pred CCcEEEcCCcHHHHHH-HHH--hc-CCCCEEEEeCCCchhhHhHHHHhcc-ccccccccCccceeEEeecCCCCCccCCC
Q 013521 135 GDEIFISDGAQSDISR-LQM--LL-GSNVTVAVQDPSFPAYIDTSVIVGQ-AGKFLKETGKYRNIVYMNCRPENNFFPDL 209 (441)
Q Consensus 135 ~~~I~~t~G~~~al~~-l~~--l~-~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~v~~v~~~~~~~~~~~~ 209 (441)
.-+.-+-.|++++-.. ++. .. +.+++|+++.-.||.+....+.... .+ ++++.++.++++..+
T Consensus 127 vaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g---------~~iv~~~~~~~~~~d--- 194 (429)
T PF02347_consen 127 VANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLG---------IEIVEVPLDEDGTTD--- 194 (429)
T ss_dssp EE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCC---------EEEEEE-BBTTCSB----
T ss_pred ccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCC---------eEEEEecccccCCcc---
Confidence 5566677888877665 332 33 2346999999999998876655432 12 588888887643322
Q ss_pred CCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccC
Q 013521 210 STTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAG 289 (441)
Q Consensus 210 ~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~ 289 (441)
.+++.+|++.+||+ .|.+-+ +++|.++++++|.++|+ .+.- ..... -.+..++ +-+|.+++ +|.||
T Consensus 195 --~~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL~~-l~~Pge~----GADI~vg~-~Q~fg 260 (429)
T PF02347_consen 195 --DDDTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADP-NALGG-LKSPGEY----GADIVVGE-HQTFG 260 (429)
T ss_dssp --STTEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGCCT-C--GGGG----T-SEEEEC-CTTTT
T ss_pred --ccCeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHHhC-cCChhhc----CccEEeeC-CCCCc
Confidence 46889999999976 898866 99999999999999887 3322 22211 1111222 22366776 78766
Q ss_pred C----ccceeEEEEeecccccc------------CC--------chhHHHHHHHHhhhcCCCcHHHH-HHHHHhcCCCcH
Q 013521 290 F----TGVRLGWTVVPEELRYS------------NG--------YPVIKDFNRIVCTCFNGASNIVQ-AGGLACLSPDGF 344 (441)
Q Consensus 290 ~----~G~r~G~l~~~~~~~~~------------~~--------~~~~~~~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~ 344 (441)
. .|--.|++.+.+++++. +. ....+.+++.+..+..+++.... .++...+.-.|.
T Consensus 261 ~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~ 340 (429)
T PF02347_consen 261 IPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGP 340 (429)
T ss_dssp ---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCH
Confidence 4 46678999999887522 00 01112344444444443333222 222223322455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceE--EEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEE
Q 013521 345 QALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPY--VWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRV 421 (441)
Q Consensus 345 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRl 421 (441)
+.+++..+....+..++.+.|.+. ++.+.. ..+| +....+. ....+++++ ++.-- -.+.....+++-+
T Consensus 341 ~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~--~~f~e~v~~~~~~----~~~~~l~~~-~~~~g--l~~~~~~~~~~li 411 (429)
T PF02347_consen 341 EGLREIAERIHLNAHYLAERLKKIYGLPFDN--PFFFEFVVVFSKD----KEVEELLKR-GIEGG--LNLRYPDDGALLI 411 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCTTBECSSS--SSBSSEEEEESS-----HHHHHHHHT-T------EEEGGG-SSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccCC--CCceeeeeecCCc----HHHHHHHHH-HHhcC--CCccccCCCeEEE
Confidence 778999999999999999999986 444332 3333 3333332 223334433 33211 1112223447777
Q ss_pred Eee--cCHHHHHHHHHHH
Q 013521 422 SAF--GHREYISEACRRL 437 (441)
Q Consensus 422 s~~--~~~~~~~~~l~~l 437 (441)
++. .++++++.+++.|
T Consensus 412 ~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 412 CVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp E--TT--HHHHHHHHH--
T ss_pred EccCCCCHHHHHHHHhcC
Confidence 773 3688999888764
No 373
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.06 E-value=2.1e-08 Score=90.53 Aligned_cols=320 Identities=13% Similarity=0.135 Sum_probs=182.9
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH---HHhc----C-
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL---QMLL----G- 156 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l---~~l~----~- 156 (441)
..+|.+++++++....+- +.+.-.|. .+--+.++|+...++. +-++.++-+.+|.... .+.+ +
T Consensus 75 hchpki~~aLqeq~~kLt-lssrafYn------d~~~~f~~~vt~lf~~--~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ 145 (427)
T KOG1402|consen 75 HCHPKIIKALQEQADKLT-LSSRAFYN------DVLGEFAEYVTKLFGY--DKVLPMNTGAEAVETACKLARKWGYRKKN 145 (427)
T ss_pred CCCHHHHHHHHHHHhHhh-hhhHHHhh------hhHHHHHHHHHHhcCc--ceeeecccchhHHHHHHHHHHHHHHhhcc
Confidence 478999999999887532 12222242 2223344444333443 5666666667777642 2211 2
Q ss_pred -CC-C-EEEEeCCCchhhHhHHHHhcccc----ccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCC-CCccc
Q 013521 157 -SN-V-TVAVQDPSFPAYIDTSVIVGQAG----KFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSP-NNPTG 228 (441)
Q Consensus 157 -~g-d-~Vlv~~p~y~~~~~~~~~~g~~~----~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p-~NPtG 228 (441)
|. . .|+....+|++-.-.+-.++-.. .|-+... ..+..+|..+...+...+. .++..+ ++..| |---|
T Consensus 146 ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P--~~~~~v~Y~d~eale~~l~-~~~vaa-FivEPIQGEaG 221 (427)
T KOG1402|consen 146 IPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLP--GVVDKVPYGDAEALEVALK-SPNVAA-FIVEPIQGEAG 221 (427)
T ss_pred CCccceeEEEecccccCceeeeEEecCCcchhhccCCCCC--CcceeeccCCHHHHHHHhc-CCCeeE-EEeeccccccc
Confidence 32 2 34445556665321111111000 0000000 0123333322111111122 256666 44577 88888
Q ss_pred cCC-CHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCC-CcceeEEEecCCcccCCccceeEEEEeeccccc
Q 013521 229 HAA-TWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPG-AREVAIEISSFSKFAGFTGVRLGWTVVPEELRY 306 (441)
Q Consensus 229 ~~~-~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~ 306 (441)
++. |+..++++.++|.+||+++|.||+...+...+.... ..... .||.++ |.|.++-.=+.+..+++.++++
T Consensus 222 VvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la-~d~env~PDivi----lgKalSGG~~Pvsavl~~~~im- 295 (427)
T KOG1402|consen 222 VVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLA-CDYENVRPDIVI----LGKALSGGVYPVSAVLADDDIM- 295 (427)
T ss_pred eEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEE-eehhhcCCCeEE----EeccccCCeeeeEEEEecHHHH-
Confidence 765 567899999999999999999999997766553211 11211 355433 6788863334577777877774
Q ss_pred cCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC--CC----eeeCCCCceE
Q 013521 307 SNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL--GL----KVNGGKNAPY 380 (441)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~----~~~~~~~~~~ 380 (441)
-.+......++.+.+++...++.++|+- ..-+++.++.++.-..++..|.++ .+ +... ..|.+
T Consensus 296 -------~~~~pgeHgsTyggNpLg~~vaiAalev---i~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VR-GrGl~ 364 (427)
T KOG1402|consen 296 -------LNIKPGEHGSTYGGNPLGCAVAIAALEV---IVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVR-GRGLL 364 (427)
T ss_pred -------hccCCCccccccCCChHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhccccccchhheee-ccceE
Confidence 2233333445566789999989888862 112666777777778888888877 22 2222 25666
Q ss_pred EEEEcC-----CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 381 VWVQFP-----GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 381 ~~~~~~-----~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.-+.+. +.+..+.+-. +++.|++--|-+ .+-||++ +.-++++++++++.|.+.+
T Consensus 365 ~ai~i~~~~~~~~~aw~~cl~-lk~~g~LAkptH------~~IiRfaPPL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 365 NAIVINPSKTSGQDAWDVCLA-LKENGLLAKPTH------GNIIRFAPPLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred EEEEeccccccchhHHHHHHc-ccccccccCCCC------CCeEEecCCcccCHHHHHHHHHHHHHHh
Confidence 655553 1233444444 556688776632 4589998 5668999999999998753
No 374
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.03 E-value=1.5e-08 Score=98.13 Aligned_cols=272 Identities=13% Similarity=0.126 Sum_probs=160.9
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCC-------CCcEEEcCCcHHHHHH-HHH----hc--
Q 013521 90 ITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIE-------GDEIFISDGAQSDISR-LQM----LL-- 155 (441)
Q Consensus 90 ~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-------~~~I~~t~G~~~al~~-l~~----l~-- 155 (441)
+-+.+...+. .....|...+...++.+.+.+|+.+.++.+ ...=++|+|+++++.. +.. ..
T Consensus 56 ~~~~l~~~~n-----~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~ 130 (373)
T PF00282_consen 56 LADLLASALN-----QNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPR 130 (373)
T ss_dssp HHHHHHHHHT------BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhc-----ccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhh
Confidence 3444444443 333445555678889999999998866665 1356788999888654 321 11
Q ss_pred --CCC-----C-EEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-CCC-------CCCcc-EE
Q 013521 156 --GSN-----V-TVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-LST-------TSRTD-II 218 (441)
Q Consensus 156 --~~g-----d-~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~-------~~~~~-~v 218 (441)
..| + .|++.+-+|.++...+..+| +.++.||+++++.++.+ +++ ..++- +|
T Consensus 131 ~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lG------------lg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~v 198 (373)
T PF00282_consen 131 SKAKGVEEIPKPVIYVSEQAHYSIEKAARILG------------LGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAV 198 (373)
T ss_dssp HHHHTTTHCSSEEEEEETTS-THHHHHHHHTT------------SEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEE
T ss_pred hhhcccccccccccccccccccHHHHhcceee------------eEEEEecCCcchhhhHHHhhhhhcccccccccceee
Confidence 111 2 56677779999999999999 68999999875433322 221 12233 44
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccccc-CCCCCcccccCCCcceeEEEecCCcccCCccceeEE
Q 013521 219 FFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYIT-DPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGW 297 (441)
Q Consensus 219 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~ 297 (441)
+.+-....||.+=+ +++|.++|+++++++.+|.+|+...+ .+..... ..+.+.-.-+.-+++|.++ ....+|+
T Consensus 199 vat~Gtt~~Ga~D~---l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~--~~gi~~adSit~d~HK~l~-~P~~~~~ 272 (373)
T PF00282_consen 199 VATAGTTNTGAIDP---LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHL--LFGIERADSITIDPHKWLG-VPYGCGV 272 (373)
T ss_dssp EEEBS-TTTSBB-S---HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGG--GTTGGGESEEEEETTTTTS--SSS-EE
T ss_pred eccCCCcccccccC---HHHHhhhccccceeeeeccccccccccccccccc--ccccccccccccchhhhhc-CCcccee
Confidence 44566888998855 89999999999999999999997322 1111111 1112222345567999997 7779999
Q ss_pred EEeeccccccCC----chhHHHH-------HHHHhhhcCCCcH-HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 013521 298 TVVPEELRYSNG----YPVIKDF-------NRIVCTCFNGASN-IVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAF 365 (441)
Q Consensus 298 l~~~~~~~~~~~----~~~~~~~-------~~~~~~~~~~~~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 365 (441)
+..+++...... ..+.... ......+.. .+. .....+-..++..|.+.++++.++..+..+++.+.|
T Consensus 273 ~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~-~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l 351 (373)
T PF00282_consen 273 LLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQ-GSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRL 351 (373)
T ss_dssp EEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSS-SSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecccchHHHhccChhhhccccccccccccccccccc-ccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 988876421100 0000000 000001111 222 222222233333445677888888888999999999
Q ss_pred HhC-CCeeeCCCCceEEEEEc
Q 013521 366 QSL-GLKVNGGKNAPYVWVQF 385 (441)
Q Consensus 366 ~~~-g~~~~~~~~~~~~~~~~ 385 (441)
++. ++++..++.-..+.+++
T Consensus 352 ~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 352 RKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp HTSTTEEESSTTSSSEEEEEE
T ss_pred HhCCCEEEEcCCCceEEEEEe
Confidence 988 68887666777777765
No 375
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.94 E-value=6.3e-07 Score=82.28 Aligned_cols=339 Identities=15% Similarity=0.139 Sum_probs=188.1
Q ss_pred CcHHHHHHHHHHHhhccCCCCCC--CCCCCcCcHHHHHHHHHHH-hhhCCCCCC----cEEEcCCcHHHHHHHHHhcCCC
Q 013521 86 IPDIITSAMAEHAFALSTVKGYK--GYGAEQGNMALRTAIADKF-YKDMGIEGD----EIFISDGAQSDISRLQMLLGSN 158 (441)
Q Consensus 86 ~~~~~~~al~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l-~~~~~~~~~----~I~~t~G~~~al~~l~~l~~~g 158 (441)
....+.+++-..+.+... .++. +|....-+.+-.|.+++-- .+-++++|+ ||-.-+|+.+.+..-.+++.|+
T Consensus 52 ts~aVmeAlGS~ltNKYS-EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph 130 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYS-EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPH 130 (477)
T ss_pred hHHHHHHHHhHHhhcccc-cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCC
Confidence 567788888888865432 2322 2321111222233333321 125677766 8888999998888889999999
Q ss_pred CEEEEeCCCchhhH-hHHHHhccccccccccCccceeEEeecCCCCCcc-CC-CCC---CCCccEEEEcCCCCccccCCC
Q 013521 159 VTVAVQDPSFPAYI-DTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFF-PD-LST---TSRTDIIFFCSPNNPTGHAAT 232 (441)
Q Consensus 159 d~Vlv~~p~y~~~~-~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~-~~-~~~---~~~~~~v~i~~p~NPtG~~~~ 232 (441)
|+|+=.+.-..+.. +....-+.+.. . ..-+.+-.+..++++.++. -| +++ ..++|+|+--...+| ..++
T Consensus 131 ~RiMGLDLP~GGHLsHGy~T~~kkIS-a--~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~--R~~D 205 (477)
T KOG2467|consen 131 ERIMGLDLPSGGHLSHGYQTPTKKIS-A--TSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSAYS--RLID 205 (477)
T ss_pred CeeeeccCCCCCccccccccCCceee-e--eeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEeccccch--hhcc
Confidence 99986443333221 11111111000 0 0000122233444444421 11 222 368887663222222 2234
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccc-cccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccC---
Q 013521 233 WQQLKKLVEFAKANGSIIVYDSAYAA-YITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSN--- 308 (441)
Q Consensus 233 ~~~~~~i~~~a~~~~~~ii~De~~~~-~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~--- 308 (441)
-.++.++|.+.|.++++|-+|.. ++..+.-++..+. ..|+..+.+|.+ .|-|-|.+.-.+..-..+
T Consensus 206 ---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-----~DiVTTTTHKsL--RGPRg~mIFyRkGvk~~~~k~ 275 (477)
T KOG2467|consen 206 ---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-----CDIVTTTTHKSL--RGPRGAMIFYRKGVKSIKPKQ 275 (477)
T ss_pred ---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-----cceeeccccccc--cCCcceeEEEeccCCcCCCCC
Confidence 45566666788999999999874 4444332222222 238888999997 799988887655332111
Q ss_pred ----CchhHHHHHH-HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeC-CCCceEEE
Q 013521 309 ----GYPVIKDFNR-IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNG-GKNAPYVW 382 (441)
Q Consensus 309 ----~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~ 382 (441)
...+.+.+.. +....-.++-.....+.+-+|++-.........++..++.+.+.+.|.+.|.++.. ..+...+.
T Consensus 276 g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvL 355 (477)
T KOG2467|consen 276 GKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVL 355 (477)
T ss_pred CCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEE
Confidence 1112222221 11111111222222223334443333456777888889999999999999988754 34456788
Q ss_pred EEcC-CCChHHHHHHHHHhcCeEEeCCCCcCC---CCCCeEEEEe--ec----CHHHHHHHHHHHHhh
Q 013521 383 VQFP-GSSSWDVFAEILEKTHILTIPGSGFGP---GGNEHIRVSA--FG----HREYISEACRRLKNF 440 (441)
Q Consensus 383 ~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~~iRls~--~~----~~~~~~~~l~~l~~~ 440 (441)
+++. ..-+...++..++..+|.+.--..++. ..++.|||+. .+ .++++++..+-|.++
T Consensus 356 vDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~a 423 (477)
T KOG2467|consen 356 VDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRA 423 (477)
T ss_pred EeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHH
Confidence 8886 234456678888888888775555542 3478899994 11 367888777766543
No 376
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.84 E-value=2.1e-07 Score=83.12 Aligned_cols=184 Identities=18% Similarity=0.275 Sum_probs=120.3
Q ss_pred CCCCCCC-CcCcHHHHHHHHHHHhhhCCCCCC--cEEEcCCcHHHHHH-HHHhcCCCCEEEEeCC-CchhhHhHHHHhcc
Q 013521 106 GYKGYGA-EQGNMALRTAIADKFYKDMGIEGD--EIFISDGAQSDISR-LQMLLGSNVTVAVQDP-SFPAYIDTSVIVGQ 180 (441)
Q Consensus 106 ~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~--~I~~t~G~~~al~~-l~~l~~~gd~Vlv~~p-~y~~~~~~~~~~g~ 180 (441)
+..+|+. +-|...|.+..|+-+ +.+.. +.-+.+|+. ||.+ |+.+++|||+.+...- -|....+....-|.
T Consensus 56 ~stGYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~isGTH-AI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~ 130 (416)
T COG4100 56 GSTGYGYDDLGRDTLERVYAQVF----GAEAALVRPQIISGTH-AIACALFGILRPGDELLYITGSPYDTLEEVIGLRGE 130 (416)
T ss_pred CCCCCCccccchhHHHHHHHHHh----ccccceeeeeeecchh-HHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCC
Confidence 3345553 457677777777764 54432 444667655 6665 9999999999876433 45555555544442
Q ss_pred -ccccccccCccceeEEeecCCCCCccCC-CC--CCCCccEEEEc-CCCCccccCCCHHHHHHHHHHHHHc--CcEEEEc
Q 013521 181 -AGKFLKETGKYRNIVYMNCRPENNFFPD-LS--TTSRTDIIFFC-SPNNPTGHAATWQQLKKLVEFAKAN--GSIIVYD 253 (441)
Q Consensus 181 -~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~--~~~~~~~v~i~-~p~NPtG~~~~~~~~~~i~~~a~~~--~~~ii~D 253 (441)
.|.+...+ +....+|+..++..+.+ +. ..+++|+|.|. +..+-.--.++.+++++++++.++- ++++++|
T Consensus 131 ~~gSL~dfg---i~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVD 207 (416)
T COG4100 131 GQGSLKDFG---IKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVD 207 (416)
T ss_pred CcccHHHhC---cceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEe
Confidence 12333333 35667777765543222 11 14789999986 4444444458899999999999974 7999999
Q ss_pred ccccccccCCCCCcccccCCCcceeEEEecCCcccCCccce--eEEEEeecccc
Q 013521 254 SAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVR--LGWTVVPEELR 305 (441)
Q Consensus 254 e~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r--~G~l~~~~~~~ 305 (441)
.+|++|.-...|..+ +-.++.+|+-|.-| .|+- -||+++.++++
T Consensus 208 NCYGEFvE~~EPt~v-------GaDliAGSLIKNpG-GgiaktGGYiaGk~~~v 253 (416)
T COG4100 208 NCYGEFVEEKEPTHV-------GADLIAGSLIKNPG-GGIAKTGGYIAGKAELV 253 (416)
T ss_pred ccchhhhhccCcccc-------chhhhccceeeCCC-CceeeccceeechHHHH
Confidence 999999876555433 12388999999876 5543 37999988885
No 377
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.81 E-value=2.1e-05 Score=74.31 Aligned_cols=348 Identities=16% Similarity=0.150 Sum_probs=194.6
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCc--CcHHHHHHHHHH---Hhh
Q 013521 55 FPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQ--GNMALRTAIADK---FYK 129 (441)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~--g~~~lr~~ia~~---l~~ 129 (441)
..+...+.....+++. .-.--+|.|.++--.|+.+.+.+.+ +. ..+..|+|.+ -.+---|++=+| ...
T Consensus 59 E~e~l~~l~~ia~kN~-~~~sfiG~GyY~~~~P~vI~rnile---~p---ewyTaYTPYQpEISQGrLqaLfefQtlv~d 131 (450)
T COG0403 59 EYEALAELKEIASKNK-VFTSFIGAGYYDTYTPPVILRNILE---NP---EWYTAYTPYQPEISQGRLEALFEFQTLVAD 131 (450)
T ss_pred HHHHHHHHHHHHhcCc-hhhhhccCcccCCcCcHHHHHHhhc---Cc---cccccCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 3344444444444432 1223467777777778876645444 22 3344555421 222233333333 223
Q ss_pred hCCCCCCcEEEcCCcHHHHHH-H--HHhcC-CCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCc
Q 013521 130 DMGIEGDEIFISDGAQSDISR-L--QMLLG-SNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF 205 (441)
Q Consensus 130 ~~~~~~~~I~~t~G~~~al~~-l--~~l~~-~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~ 205 (441)
..|.+-.|--+-.++|.+-+. + .+.-+ +..+++|+.-.||......+..-.... .+++..+.++.
T Consensus 132 LTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g--------~~i~~~~~~d~--- 200 (450)
T COG0403 132 LTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLG--------IEIEVVDADDL--- 200 (450)
T ss_pred HhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCc--------eEEEEeccchh---
Confidence 345555566677778776664 3 33333 358999999999999888876542111 35666555421
Q ss_pred cCCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEec
Q 013521 206 FPDLST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISS 283 (441)
Q Consensus 206 ~~~~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S 283 (441)
.+++. ...+-++++.+|+. .| ...+++++|.+.++++|.++++=- +.. ...+...++..+-.|.+++
T Consensus 201 -~~l~~~~~~~~~gv~vQyP~~-~G--~~~~d~~~l~~~~h~~~al~~v~a---Dpl----aL~LL~pPGe~GADIvvG~ 269 (450)
T COG0403 201 -DDLESADDGDVFGVLVQYPNT-FG--IVEEDLRALIEAAHSAGALVIVAA---DPL----ALGLLKPPGEFGADIVVGS 269 (450)
T ss_pred -hhhhhccccCeEEEEEecCCC-CC--ccchhHHHHHHHHhhcCCEEEEEe---chh----HhhccCCccccCCceEEec
Confidence 12222 24677888877763 66 334569999999999998877421 100 1122222222333488888
Q ss_pred CCc---ccCCccceeEEEEeecccccc------------C--------CchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC
Q 013521 284 FSK---FAGFTGVRLGWTVVPEELRYS------------N--------GYPVIKDFNRIVCTCFNGASNIVQAGGLACLS 340 (441)
Q Consensus 284 ~SK---~~~~~G~r~G~l~~~~~~~~~------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 340 (441)
..- -+|+.|..+||+.+.+++++. . .....+.+++-+..+..+++......+.+...
T Consensus 270 ~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~ 349 (450)
T COG0403 270 AQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYA 349 (450)
T ss_pred CcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHH
Confidence 765 344567889999998887522 0 01112234444444444443322221111111
Q ss_pred -CCcHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeeCCCCceE--EEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCC
Q 013521 341 -PDGFQALRTVIDYYKENAKIIVDAFQSL--GLKVNGGKNAPY--VWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGG 415 (441)
Q Consensus 341 -~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~ 415 (441)
-.+-+.++++..+..+...++.+.|++. |+++.. ..+| +.++++......++.+.. ..|+-++.-.
T Consensus 350 ~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~--~~fFdt~~v~~~~~~~~~l~~~~~-~~G~~L~~~~------ 420 (450)
T COG0403 350 VYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVF--DHFFDTFTVRVPEEVAEALLAAAI-AGGINLRRVD------ 420 (450)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecc--ccceeeEEEecchhHHHHHHHHHH-hcCCceeeec------
Confidence 1344678999999999999999999966 577664 2555 455554322233333333 3477665422
Q ss_pred CCeEEEEee--cCHHHHHHHHHHHHhh
Q 013521 416 NEHIRVSAF--GHREYISEACRRLKNF 440 (441)
Q Consensus 416 ~~~iRls~~--~~~~~~~~~l~~l~~~ 440 (441)
+..+=+++. .++++++.+++.+...
T Consensus 421 ~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 421 ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 335666763 3689999999888653
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.71 E-value=1.5e-06 Score=82.11 Aligned_cols=192 Identities=18% Similarity=0.160 Sum_probs=124.3
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCC-CCCcEEEcCCcHHHHHHH-HHhcCCCCEEE
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGI-EGDEIFISDGAQSDISRL-QMLLGSNVTVA 162 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~-~~~~I~~t~G~~~al~~l-~~l~~~gd~Vl 162 (441)
..+++.++++...+..+.+. .|.-..|...-|......+ ..++ ..+.++++++.+.++.++ ..+..++..|+
T Consensus 38 ~~~~e~iea~~~~~~~~v~L----e~~l~~g~~~~R~~~~~~~--~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVi 111 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVEL----ETDLKTGKRGARLTELAEL--LCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVV 111 (395)
T ss_pred cCCHHHHHHHHHHhccccee----eeecccchhhHHHHHHHHH--HhcccchhheeeECCcHHHHHHHHhhhccCCeEEE
Confidence 35688888999988765432 4433444444443322222 1243 378999999999999884 55555444432
Q ss_pred -----EeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC--CCCCccEEEEc-CCCCccccCCCHH
Q 013521 163 -----VQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS--TTSRTDIIFFC-SPNNPTGHAATWQ 234 (441)
Q Consensus 163 -----v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~--~~~~~~~v~i~-~p~NPtG~~~~~~ 234 (441)
++ ++.+.+.++.+..| .+++.+..... ...-|++ ..+++++++-. ++|.+.-..++
T Consensus 112 s~g~lV~-gg~~~v~d~~~~aG------------~~l~EvG~tn~-t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~-- 175 (395)
T COG1921 112 SRGELVE-GGAFRVPDIIRLAG------------AKLVEVGTTNR-THLKDYELAINENTALLLKVHSSNYGFTGMLS-- 175 (395)
T ss_pred Ecccccc-CCCCChhHHHHHcC------------CEEEEecccCc-CCHHHHHHHhccCCeeEEEEeecccccccccc--
Confidence 23 57788999999999 46666654322 1112222 25788877766 44543333456
Q ss_pred HHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccc
Q 013521 235 QLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELR 305 (441)
Q Consensus 235 ~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~ 305 (441)
.++++++|+++|+++|+|..-+....... ....... +-.+++.|-.|.+| |.+.|.+++.++++
T Consensus 176 -~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~----GaDLV~~SgdKllg--GPqaGii~GkKelI 240 (395)
T COG1921 176 -EEELVEIAHEKGLPVIVDLASGALVDKEPDLREALAL----GADLVSFSGDKLLG--GPQAGIIVGKKELI 240 (395)
T ss_pred -HHHHHHHHHHcCCCEEEecCCccccccccchhHHHhc----CCCEEEEecchhcC--CCccceEechHHHH
Confidence 77889999999999999999876543211 2233333 22388999999986 88899999999985
No 379
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.67 E-value=1.8e-05 Score=73.43 Aligned_cols=328 Identities=14% Similarity=0.174 Sum_probs=175.8
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHhhccCC-CC---CCCCCCCcCcHHHHHHHHHHHhhhCCCCCC-cEEEcCCcHHH
Q 013521 73 RLIRLGIGDTTQPIPDIITSAMAEHAFALSTV-KG---YKGYGAEQGNMALRTAIADKFYKDMGIEGD-EIFISDGAQSD 147 (441)
Q Consensus 73 ~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~-~~---~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~I~~t~G~~~a 147 (441)
.+.||+.|.- ..|+++++..++.+..+... -. .+|.+ ..+ ..+.+...+.+++.++++.+ .|++..|+..+
T Consensus 5 ~~~nFsaGPa--~lp~~vL~~a~~e~~~~~g~g~svme~SHRs-k~~-~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~ 80 (365)
T COG1932 5 RVYNFSAGPA--ALPPEVLQQAQKELLDWNGLGMSVMEISHRS-KEF-KNVLEEAEKDLRELLNIPDDYKVLFLQGGATG 80 (365)
T ss_pred CCCCCCCCcc--cCCHHHHHHHHHHHhhhccCCcceeeecccc-HHH-HHHHHHHHHHHHHHhCCCCCceEEEEcCccHH
Confidence 4678888853 35677777777766554310 01 22221 122 23333333334445677766 78877776555
Q ss_pred -HHH-HHHhcCCCCEEEEeCCCchhh-HhHHHHhccccccccccCccceeEEeec-CCCCCccCCCCC---CCCccEEEE
Q 013521 148 -ISR-LQMLLGSNVTVAVQDPSFPAY-IDTSVIVGQAGKFLKETGKYRNIVYMNC-RPENNFFPDLST---TSRTDIIFF 220 (441)
Q Consensus 148 -l~~-l~~l~~~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~v~~v~~-~~~~~~~~~~~~---~~~~~~v~i 220 (441)
.+. .+.++..+..-.+..-.|... ...++.++.+. .+..... ..+-+..+++.. .++...|++
T Consensus 81 qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~----------~~~~~~~~~~~~~~iP~~~~~~~~~~~ayv~~ 150 (365)
T COG1932 81 QFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQP----------KLIDARIEEAGYGSIPDLSKWDFSDNDAYVHF 150 (365)
T ss_pred HHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccc----------cccccceeccCccCCCChhhcccCCCccEEEE
Confidence 555 588886554313334444332 22333333210 1111110 111122334332 123444666
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEe
Q 013521 221 CSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVV 300 (441)
Q Consensus 221 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~ 300 (441)
|.-..-+|+-++. ...+. .+.++|+|-...-+.. +..+..+ .++-.|..|.+|..| ++.++.
T Consensus 151 ~~NeTi~Gv~v~~--~p~~~-----~~~~~v~D~SS~ilsr---~iDvsk~------dviyagaQKnlGpaG--ltvvIv 212 (365)
T COG1932 151 CWNETISGVEVPE--LPDIG-----SDGLLVADASSAILSR---PIDVSKY------DVIYAGAQKNLGPAG--LTVVIV 212 (365)
T ss_pred ecCCcccceEccC--CCCCC-----CCceEEEecccHHhcC---CCChhHc------ceEEEehhhccCccc--eEEEEE
Confidence 6545567877762 11111 1278888876542221 3333333 256667999999888 899999
Q ss_pred eccccccCC----chhHHHHH-HHHhhhcCCCcHHHHHHHHHhc----CCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 013521 301 PEELRYSNG----YPVIKDFN-RIVCTCFNGASNIVQAGGLACL----SPDGFQALRTVIDYYKENAKIIVDAFQSLGLK 371 (441)
Q Consensus 301 ~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~l----~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 371 (441)
+++++.+.. +++..... .....++++++.++-......+ .++|. +.+.++-+++.+.|++.+++.++.
T Consensus 213 r~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl---~~~~~rn~~ka~~LY~~id~s~fy 289 (365)
T COG1932 213 RPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGL---EALEARNQAKAQLLYDWIDKSDFY 289 (365)
T ss_pred cHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999875431 11111111 1223345555555543332222 24444 677778888999999999887442
Q ss_pred e----eCCCCceEEEEEcCCC-ChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec--CHHHHHHHHHHHHhh
Q 013521 372 V----NGGKNAPYVWVQFPGS-SSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG--HREYISEACRRLKNF 440 (441)
Q Consensus 372 ~----~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~~~~~~l~~l~~~ 440 (441)
- ....+-+.+.+++... -+..++..+. ++|+...-|+. ..+.+|+++++ +.++++.+++-|+.+
T Consensus 290 ~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae-~~gl~~lkGhr----~vgGmRasiynA~~~e~veaL~~fm~~f 360 (365)
T COG1932 290 RNLVAKANRSRMNVTFTLVDAELDKGFVAEAE-AAGLIYLKGHR----SVGGLRASIYNAVPLEDVEALTDFMDWF 360 (365)
T ss_pred ccccchhhccceeEEEEcCcHHHHHHHHHHHH-HcCCceecccc----CCCceeeeeecCCCHHHHHHHHHHHHHH
Confidence 2 1223456788888632 2344555554 45887777732 23459999865 778999988887764
No 380
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.64 E-value=7.7e-06 Score=77.16 Aligned_cols=303 Identities=15% Similarity=0.152 Sum_probs=178.8
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHH---HHHHHhc-CC----CCEEEEeCCCchhhHhHHHHhcccccc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDI---SRLQMLL-GS----NVTVAVQDPSFPAYIDTSVIVGQAGKF 184 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al---~~l~~l~-~~----gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 184 (441)
.+|..++...+.+||.+-.|.+.-.+-.-+|++.=+ .+|.... .. .+.+++++-.|..-...+...|
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G----- 178 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAG----- 178 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcC-----
Confidence 468899999999999875555555555667776533 3344443 22 3689999999988888888899
Q ss_pred ccccCccceeEEeecCCCCCccCC-CCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccccc
Q 013521 185 LKETGKYRNIVYMNCRPENNFFPD-LST--TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYIT 261 (441)
Q Consensus 185 ~~~~~~~~~v~~v~~~~~~~~~~~-~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~ 261 (441)
.+|+.|+.+++++.+.+ +.. .+++.+++|+||+. .|.. ++.+++|+++.+++|..+..|.+-..-..
T Consensus 179 -------~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~v 248 (496)
T COG1003 179 -------FKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIV 248 (496)
T ss_pred -------ceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhh
Confidence 59999999988765443 221 47889999989865 5543 67899999999999999999998764222
Q ss_pred CCCCCcccccCCCcceeEEEecCCcccCC----ccceeEEEEeeccccccCCch-----hHHHHH-H-------HHhhhc
Q 013521 262 DPSPRSIYEIPGAREVAIEISSFSKFAGF----TGVRLGWTVVPEELRYSNGYP-----VIKDFN-R-------IVCTCF 324 (441)
Q Consensus 262 ~~~~~~~~~~~~~~~~~i~i~S~SK~~~~----~G~r~G~l~~~~~~~~~~~~~-----~~~~~~-~-------~~~~~~ 324 (441)
+- ....+..-.+..+ -++|+|+. .|-..|=+.+...+... .+. ....+. . -+...+
T Consensus 249 G~-----~rPGd~G~DV~Hl-NLHKTF~iPHGGGGPG~GPvgVk~~L~pf-LP~p~~~~~~~~y~~~~~~~~s~g~~~a~ 321 (496)
T COG1003 249 GL-----ARPGDMGFDVVHL-NLHKTFCIPHGGGGPGAGPVGVKAHLAPF-LPGPVVYHDVGEYRLDYDGKKSIGVSAAP 321 (496)
T ss_pred cc-----ccccccccceEEe-ecccccccCCCCCCCCCCceehHhhcccc-CCCCcccCCCccccccCCCCccceeeccc
Confidence 21 1111111112333 37888754 34456666555444210 000 000000 0 011122
Q ss_pred CCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCC-CceEEEEEcC------CCChHHHHHH
Q 013521 325 NGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGK-NAPYVWVQFP------GSSSWDVFAE 396 (441)
Q Consensus 325 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~~~~------~~~~~~~~~~ 396 (441)
.+...+... +.+.+...+.+.+++.-+.---+.+++.+.|+.. .+.+.+.. -..=+.++.. +....+++++
T Consensus 322 ~Gs~~il~~-a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKr 400 (496)
T COG1003 322 YGSASILPI-AWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLKKETGVRALDVAKR 400 (496)
T ss_pred cCcchHHHH-HHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHH
Confidence 222222222 2333333444555666666666788999999874 33333211 1111334443 5677889999
Q ss_pred HHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHHhh
Q 013521 397 ILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLKNF 440 (441)
Q Consensus 397 ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~~~ 440 (441)
|++- |+.-..-+ |-.--.+.+=|=- ..+.+++++.+++|.++
T Consensus 401 LlD~-GfHaPT~~-FPliV~~tLMIEPTEsEsk~eLDrf~dami~I 444 (496)
T COG1003 401 LLDY-GFHAPTMY-FPLIVAGTLMIEPTESESKEELDRFIDAMIAI 444 (496)
T ss_pred HHhc-CCCCCccc-CccccccceeecCCCCCCHHHHHHHHHHHHHH
Confidence 8865 87654433 2211233343332 23678899998888764
No 381
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.59 E-value=7.9e-05 Score=78.61 Aligned_cols=341 Identities=12% Similarity=0.097 Sum_probs=188.9
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCC-----cCcHHHHHHHHHHH
Q 013521 53 YLFPEISMRESEHIRKHPDARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAE-----QGNMALRTAIADKF 127 (441)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~-----~g~~~lr~~ia~~l 127 (441)
....++.+.......++.. -..-+|.|.++--.|..+.+.+.+ +. ..+..|+|. +|..+..=.....+
T Consensus 61 ~sE~e~~~~~~~~a~kN~~-~~~fiG~G~y~~~~P~vi~~~i~~---~~---~~yTaYTPYQpEisQG~Lqal~e~Qtmi 133 (954)
T PRK12566 61 LDEQAALARLRGYAEQNQV-WTSLIGMGYHGTVTPTVILRNVLE---NP---GWYTAYTPYQPEIAQGRLEALLNFQQMT 133 (954)
T ss_pred CCHHHHHHHHHHHHhcCCC-ccccccccccCCcCcHHHHHHHHh---Cc---hhhhcCCCCCchhhhHHHHHHHHHHHHH
Confidence 3344454544444444322 234567777776677766455544 21 224455542 34333322223333
Q ss_pred hhhCCCCCCcEEEcCCcHHHHHH-HHH--hcC-CCCEEEEeCCCchhhHhHHHHhcc-ccccccccCccceeEEeecCCC
Q 013521 128 YKDMGIEGDEIFISDGAQSDISR-LQM--LLG-SNVTVAVQDPSFPAYIDTSVIVGQ-AGKFLKETGKYRNIVYMNCRPE 202 (441)
Q Consensus 128 ~~~~~~~~~~I~~t~G~~~al~~-l~~--l~~-~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~v~~v~~~~~ 202 (441)
....|.+-.|--+-.|++++-.. ++. ..+ ...+|+|+.-.||.+....+.... .| ++++.-.+
T Consensus 134 ~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g---------~~i~~~~~--- 201 (954)
T PRK12566 134 IDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFG---------FELVVDAV--- 201 (954)
T ss_pred HHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCC---------cEEEEcch---
Confidence 33345554455566677765553 322 222 246899999999998877765532 11 24443111
Q ss_pred CCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEe
Q 013521 203 NNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEIS 282 (441)
Q Consensus 203 ~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 282 (441)
.. .. ..++..+++.+|+. .|.+-+ +++|.++++++|.++|+ .+.- +.. .+..-++..+-+|.++
T Consensus 202 ---~~-~~-~~~~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~~-~~d~-laL-----~ll~~Pge~GADI~vG 265 (954)
T PRK12566 202 ---DN-LA-AHAVFGALLQYPDT-HGEIRD---LRPLIDQLHGQQALACV-AADL-LSL-----LVLTPPGELGADVVLG 265 (954)
T ss_pred ---hh-cC-CCCEEEEEEECCCC-ceEEcc---HHHHHHHHHHcCCEEEE-EeCH-HHH-----hCCCChhhcCCcEEee
Confidence 11 11 13577888889865 888844 89999999999988663 2211 111 1111122223347677
Q ss_pred cC---CcccCCccceeEEEEeecccccc------------C--------CchhHHHHHHHHhhhcCCCcHHHHHHHHHhc
Q 013521 283 SF---SKFAGFTGVRLGWTVVPEELRYS------------N--------GYPVIKDFNRIVCTCFNGASNIVQAGGLACL 339 (441)
Q Consensus 283 S~---SK~~~~~G~r~G~l~~~~~~~~~------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 339 (441)
+- .=-+|..|--.||+.+.+++++. + .....+.+++-+..+..+++....+.+.+++
T Consensus 266 ~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y 345 (954)
T PRK12566 266 STQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFY 345 (954)
T ss_pred CCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHH
Confidence 43 33344457779999998877522 0 0001222344444444333332222222222
Q ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCceE--EEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCC
Q 013521 340 -SPDGFQALRTVIDYYKENAKIIVDAFQSLGLKVNGGKNAPY--VWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGN 416 (441)
Q Consensus 340 -~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 416 (441)
.-.+-+.+++..++...+..++.+.|.+.|+++.. ..+| +.+++ +....++..+.++ .||-++-- ++
T Consensus 346 ~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~--~~fF~~~~v~~-~~~~~~~~~~a~~-~~~n~r~~------~~ 415 (954)
T PRK12566 346 AVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLN--RHFFDTLTLEV-GGAQAAIIESAEA-ARINLRIL------GR 415 (954)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--CCccceEEEEc-cCCHHHHHHHHHH-CCCeeEEe------CC
Confidence 11344667888888888999999999998888754 3556 44444 2234556565554 58888653 24
Q ss_pred CeEEEEee--cCHHHHHHHHHHHH
Q 013521 417 EHIRVSAF--GHREYISEACRRLK 438 (441)
Q Consensus 417 ~~iRls~~--~~~~~~~~~l~~l~ 438 (441)
+.+.+|+. .+.++++.++..+.
T Consensus 416 ~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 416 GRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHhc
Confidence 57889983 47899999988873
No 382
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.44 E-value=0.00017 Score=66.56 Aligned_cols=329 Identities=16% Similarity=0.147 Sum_probs=181.7
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHH-H
Q 013521 74 LIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRL-Q 152 (441)
Q Consensus 74 ~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l-~ 152 (441)
.|||-..+.........|.+|.+--. .|.-..++..|.+++.+.+ |. +.++.|.-+-.|-+++ .
T Consensus 48 ~IDLLTDSGTgams~~qwaamm~GDE---------AYagsrs~~~L~~avkdif----Gf--q~~iPthQGRgAE~Il~~ 112 (471)
T COG3033 48 FIDLLTDSGTGAMTDKQWAAMMRGDE---------AYAGSRSYYALADAVKDIF----GF--QYTIPTHQGRGAENILIP 112 (471)
T ss_pred EEEeeccCCcccccHHHHHHHhccch---------hhcccccHHHHHHHHHHhc----Cc--eeeeeccCCccHHHHHHH
Confidence 46665555444556666766665322 4777788899999999986 54 5677777776666653 2
Q ss_pred HhcC-----CCCEEEEeCCCchhh-HhHHHHhccccccccccCccceeEEeecCCCCC------cc--CCCCC-------
Q 013521 153 MLLG-----SNVTVAVQDPSFPAY-IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENN------FF--PDLST------- 211 (441)
Q Consensus 153 ~l~~-----~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~------~~--~~~~~------- 211 (441)
.+++ ||.+..+++..|... ....+..|. .+.-+++++..+ |. .|+++
T Consensus 113 i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~------------~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lide 180 (471)
T COG3033 113 ILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGA------------TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDE 180 (471)
T ss_pred HHhhhccccCCccccccccceecchhHHHHhcCC------------ccccccccccccccccCCCCCccCHHHHHHHHHH
Confidence 3333 454555566666443 333333342 333333332111 11 12221
Q ss_pred --CCCccEEEEc-CCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccc-cccc---CCC----CCcccccCC--Cccee
Q 013521 212 --TSRTDIIFFC-SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYA-AYIT---DPS----PRSIYEIPG--AREVA 278 (441)
Q Consensus 212 --~~~~~~v~i~-~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~-~~~~---~~~----~~~~~~~~~--~~~~~ 278 (441)
..++..|+++ ..|.-.|+..|.+.++++.++|++|++.++.|.+-. +..+ ... ..++.++.. ..-..
T Consensus 181 vG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD 260 (471)
T COG3033 181 VGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD 260 (471)
T ss_pred hCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh
Confidence 2456777776 445567899999999999999999999999997632 2211 111 234433210 00001
Q ss_pred EEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHH-----hhhcCCCcHHHHHHHHHhcCC-CcHHHHHHHHH
Q 013521 279 IEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIV-----CTCFNGASNIVQAGGLACLSP-DGFQALRTVID 352 (441)
Q Consensus 279 i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~ 352 (441)
-+.-|.-|-- +..+ -|++...++-.. .+....+... ..++.+.+.-...+.+.=|.+ -...|+..+.+
T Consensus 261 ~~~mS~KKD~-lvnm-GGfl~~~D~~~f----Dvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~ 334 (471)
T COG3033 261 GCTMSAKKDG-LVNM-GGFLCFKDDSFF----DVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVA 334 (471)
T ss_pred hheeeccccc-eecc-ccEEEecCccHH----HHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHH
Confidence 2344555532 2221 178887776410 0011111111 011222222222222222221 12244554444
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCceEEEEEcC----C-----CChHHHHHHHHHhcCeEEeCCCCcCC----------
Q 013521 353 YYKENAKIIVDAFQSLGLKVNGGKNAPYVWVQFP----G-----SSSWDVFAEILEKTHILTIPGSGFGP---------- 413 (441)
Q Consensus 353 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~ll~~~gi~v~pg~~f~~---------- 413 (441)
..++|.+.|++.|+++..|.+|.-++++.. . ...+.++.+|-++.||-..--..|..
T Consensus 335 ----Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~ 410 (471)
T COG3033 335 ----QVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQH 410 (471)
T ss_pred ----HHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccC
Confidence 467889999999998888889998888853 1 24567888888999998775444421
Q ss_pred -CCCCeEEEEee---cCHHHHHHHHHHHHh
Q 013521 414 -GGNEHIRVSAF---GHREYISEACRRLKN 439 (441)
Q Consensus 414 -~~~~~iRls~~---~~~~~~~~~l~~l~~ 439 (441)
....-+|+++- -+.+.++..++.+++
T Consensus 411 ~~~~elvRltipRrtYt~~HmD~V~~a~~~ 440 (471)
T COG3033 411 PPPAELVRLTIPRRTYTQTHMDFVIEAFKA 440 (471)
T ss_pred CCchheeeEeccccccchhHHHHHHHHHHH
Confidence 11256999972 155666665555544
No 383
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.43 E-value=5.2e-07 Score=84.42 Aligned_cols=252 Identities=17% Similarity=0.190 Sum_probs=46.4
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHH-HHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEE
Q 013521 85 PIPDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTA-IADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAV 163 (441)
Q Consensus 85 ~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~-ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv 163 (441)
+.++++.+++.+....+.++ .|.-..|...-|.. +.+.+..- ..+|.-+++|+..+|+.++..-+.+|.+|++
T Consensus 17 ~l~~~a~~a~~~~a~~Y~nL----E~dl~~G~Rg~R~~~v~~ll~~l--tgAeaA~VvNnnaAAv~L~l~~la~~~EvIv 90 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYSNL----EYDLETGKRGSRYAHVEELLCEL--TGAEAALVVNNNAAAVLLALNTLAKGKEVIV 90 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc----ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence 45678888888877665432 23212222222221 11111111 2457788888888888885444456777776
Q ss_pred eCC---Cchh---hHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC--CCCccEEEEcCCCCcc--ccCCCH
Q 013521 164 QDP---SFPA---YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST--TSRTDIIFFCSPNNPT--GHAATW 233 (441)
Q Consensus 164 ~~p---~y~~---~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~~~~~~v~i~~p~NPt--G~~~~~ 233 (441)
..- .+.+ +.++.+..| .+++.|..... ....|.+. .+++.+++..+++|-. |-.-+.
T Consensus 91 sRGelVeiGgsFRip~vm~~sG------------a~lvEVGttN~-t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~ 157 (367)
T PF03841_consen 91 SRGELVEIGGSFRIPDVMRQSG------------ARLVEVGTTNR-THLSDYEKAITENTAALLKVHTSNFRIQGFTGEV 157 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccc------------ccccccccccc-cccccccccccccccccccccccccccccccccc
Confidence 542 2332 334445555 35555554322 22334443 5789998888887753 322221
Q ss_pred HHHHHHHHHHHHcCcEEEEcccccccc------cCCCCCcccccCCCcceeEEEecCCcccCCccceeEEEEeecccccc
Q 013521 234 QQLKKLVEFAKANGSIIVYDSAYAAYI------TDPSPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYS 307 (441)
Q Consensus 234 ~~~~~i~~~a~~~~~~ii~De~~~~~~------~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~ 307 (441)
.+++++++|++|++++|+|-.-+.+. ... .+++...-. .+-.+++.|-.|.+| |.+.|.+++.++++
T Consensus 158 -~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~-Ep~v~~~~~-~GaDlV~fSGdKlLG--GPQaGiI~Gkk~lI-- 230 (367)
T PF03841_consen 158 -SLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPD-EPTVQEYLA-AGADLVTFSGDKLLG--GPQAGIIVGKKELI-- 230 (367)
T ss_dssp ----HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCC-CT-SEEEEETTSSSS--S-S-EEEEEEHHHH--
T ss_pred -cHHHHHHHHhhcCCcEEEECCCCCCcCcccccCcc-ccHHHHHhh-cCCCEEEEECCCcCC--CCCeEEEEeCHHHH--
Confidence 38899999999999999997663221 111 123333211 233488999999996 67799999999984
Q ss_pred CCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcC---CCc--------HHHHHHHHHHHHHHHHHHHHHHHhC
Q 013521 308 NGYPVIKDFNRIVCTCFNGASNIVQAGGLACLS---PDG--------FQALRTVIDYYKENAKIIVDAFQSL 368 (441)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~~~--------~~~~~~~~~~~~~~~~~l~~~L~~~ 368 (441)
++++.-.-....-+..+...+..+.|+ +.. +..+..-.+.++++.+.+.+.|...
T Consensus 231 ------~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 231 ------EKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp ------HHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred ------HHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 444432222222233344333333332 211 1234455566666677777766654
No 384
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.40 E-value=0.00026 Score=72.37 Aligned_cols=267 Identities=13% Similarity=0.036 Sum_probs=149.3
Q ss_pred CCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH-HH--HHhcC----------------------------
Q 013521 108 KGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDIS-RL--QMLLG---------------------------- 156 (441)
Q Consensus 108 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~-~l--~~l~~---------------------------- 156 (441)
..|...++...+.+.+.+|+.+.+|.+...=++|+|+|.+.. .+ .+-.+
T Consensus 113 ~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~ 192 (608)
T TIGR03811 113 VAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTK 192 (608)
T ss_pred CccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccc
Confidence 345456688899999999998877766555557888887644 23 11110
Q ss_pred ----------------------CC------CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC
Q 013521 157 ----------------------SN------VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD 208 (441)
Q Consensus 157 ----------------------~g------d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~ 208 (441)
+| -.++++.-.|.++...+..+|.-- -.++.||++.+...+.+
T Consensus 193 ~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~---------~~vv~VpvD~~~rmd~~ 263 (608)
T TIGR03811 193 EIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGL---------DQVIPVPVDSNYRMDIN 263 (608)
T ss_pred cccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCc---------ccEEEeecCCCCcCCHH
Confidence 00 057788888999999999999310 26889999765443332
Q ss_pred -CCC-------CCCc-cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCc--EEEEcccccccc---c-CCC--CCcc---
Q 013521 209 -LST-------TSRT-DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGS--IIVYDSAYAAYI---T-DPS--PRSI--- 268 (441)
Q Consensus 209 -~~~-------~~~~-~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~--~ii~De~~~~~~---~-~~~--~~~~--- 268 (441)
+++ ...+ -+|+-+-....+|.+=|.+++.+|++-++++|+ ++.+|.+|+.+. + ++. +.+.
T Consensus 264 ~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~ 343 (608)
T TIGR03811 264 ELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDL 343 (608)
T ss_pred HHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchh
Confidence 111 1222 344445668889999885555555555578897 699999999753 1 100 0000
Q ss_pred ----------------------cccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhh----
Q 013521 269 ----------------------YEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCT---- 322 (441)
Q Consensus 269 ----------------------~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~---- 322 (441)
..+.+...-.-+.-.++|.+. ....+|.++.++..+.... .....+......
T Consensus 344 ~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~-~~~a~Yl~~~~~~~p~ 421 (608)
T TIGR03811 344 QEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVI-SYFATYVFEKGADIPA 421 (608)
T ss_pred hcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHH-hcCcchhccccccCcc
Confidence 011122222234556899985 7788998888776431100 000000000000
Q ss_pred ----hcCCCcHHHH--HHHHHhcCCC--cHHHHHHHHHHHHHHHHHHHHHHHhC-------CCee--eCCCCceEEEEEc
Q 013521 323 ----CFNGASNIVQ--AGGLACLSPD--GFQALRTVIDYYKENAKIIVDAFQSL-------GLKV--NGGKNAPYVWVQF 385 (441)
Q Consensus 323 ----~~~~~~~~~~--~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~--~~~~~~~~~~~~~ 385 (441)
.....+.+.. .++-..++-. +.+.+.++.++.-+.++++.+.|.+. .+++ ..++.-+.+.+.+
T Consensus 422 ~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~ 501 (608)
T TIGR03811 422 LLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVF 501 (608)
T ss_pred cccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEE
Confidence 0111222221 1111122111 34556777788888888888888773 2443 3344555566665
No 385
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.33 E-value=5.6e-05 Score=72.11 Aligned_cols=295 Identities=12% Similarity=0.093 Sum_probs=168.6
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCC-cEEEcCCcHHHHHH-HHH---hc-C-CC-
Q 013521 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGD-EIFISDGAQSDISR-LQM---LL-G-SN- 158 (441)
Q Consensus 87 ~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~I~~t~G~~~al~~-l~~---l~-~-~g- 158 (441)
++...+-+.+++..++ .-...-| ++..++..+.-.++...++.+++ .=..|.|+++++.. -.. .. . .|
T Consensus 93 ~~~~~~l~~~~~~k~N-~l~~d~f---p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I 168 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKFN-PLHPDEF---PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGI 168 (491)
T ss_pred CcchhhHHHHHHhhcC-ccCcccc---chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCC
Confidence 3444555556555431 1111122 35666777777776665555433 33478888888432 111 11 1 12
Q ss_pred --CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC-----CCCccEEEEcCCCCccccCC
Q 013521 159 --VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST-----TSRTDIIFFCSPNNPTGHAA 231 (441)
Q Consensus 159 --d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~-----~~~~~~v~i~~p~NPtG~~~ 231 (441)
..++++.-.+..+...++.++ .++..+++++ +.+..|+.+ ..++.+++.+-|+.|+|..
T Consensus 169 ~~p~iv~~~~v~~a~eK~a~yf~------------v~l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~- 234 (491)
T KOG1383|consen 169 DKPNIVTPQNVHAAFEKAARYFE------------VELREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI- 234 (491)
T ss_pred CCccccchHHHHHHHHHHHhhEE------------EEEEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch-
Confidence 357777777777777777777 6899999987 577777654 4788998888999999977
Q ss_pred CHHHHHHHHHHHHH-cCcEEEEcccccccccC-C-CCCcccccCCCcceeEEEe-cCCcccCCccceeEEEEeecccccc
Q 013521 232 TWQQLKKLVEFAKA-NGSIIVYDSAYAAYITD-P-SPRSIYEIPGAREVAIEIS-SFSKFAGFTGVRLGWTVVPEELRYS 307 (441)
Q Consensus 232 ~~~~~~~i~~~a~~-~~~~ii~De~~~~~~~~-~-~~~~~~~~~~~~~~~i~i~-S~SK~~~~~G~r~G~l~~~~~~~~~ 307 (441)
+.+++|.++..+ +++.+.+|.+-+.|... . .+..-+.+. .+. |-.++ +-+| +|+.--.+||++-..+-+..
T Consensus 235 --e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr-~p~-V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~ 309 (491)
T KOG1383|consen 235 --EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFR-VPG-VTSISADGHK-YGLAPAGSSWVLYRNKELLP 309 (491)
T ss_pred --hhHHHHHHHHHHHhCCceeecccCccccccccccCccccccC-CCC-ceeEeeccce-eeeeecCcEEEEEccccccc
Confidence 458888888888 99999999999887653 1 111122221 112 22222 2334 23333348888865544311
Q ss_pred -CCchhHHHHHHHHhhhcCCCcHHH-HH-HHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceEEEE
Q 013521 308 -NGYPVIKDFNRIVCTCFNGASNIV-QA-GGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPYVWV 383 (441)
Q Consensus 308 -~~~~~~~~~~~~~~~~~~~~~~~~-~~-a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 383 (441)
+..-..+.........+...|.++ |. +.-+.+-..+.+...+..+.+.+....+.+.+++. ++.....+.-.|+.+
T Consensus 310 ~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~ 389 (491)
T KOG1383|consen 310 HQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILF 389 (491)
T ss_pred ceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEc
Confidence 110011111222222221122221 11 11222223455555777788889999999999997 788877655555555
Q ss_pred EcCCCChHHHHHHHHHhcCeEE
Q 013521 384 QFPGSSSWDVFAEILEKTHILT 405 (441)
Q Consensus 384 ~~~~~~~~~~~~~ll~~~gi~v 405 (441)
.-...+.-++... |++.|=.+
T Consensus 390 ~s~~~~i~elsd~-l~~~GW~l 410 (491)
T KOG1383|consen 390 GSNDVNIFELSDL-LRKKGWIL 410 (491)
T ss_pred cCCccchhhhhHH-HHhcCcCc
Confidence 4444444455444 44557554
No 386
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.16 E-value=0.0017 Score=58.64 Aligned_cols=199 Identities=12% Similarity=0.111 Sum_probs=121.1
Q ss_pred CCCCccccCCC-HHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccc-cCCCcceeEEEecCCcccCCccceeEEEE
Q 013521 222 SPNNPTGHAAT-WQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYE-IPGAREVAIEISSFSKFAGFTGVRLGWTV 299 (441)
Q Consensus 222 ~p~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~~~~G~r~G~l~ 299 (441)
+-+.=-|+++| ....+++++..+.+|-+.|.||+.-.|..-+......+ ++-.|| |-++.|-+| .|..++.++
T Consensus 217 slQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPD----IVtmgKpmG-NGhPVa~Va 291 (452)
T KOG1403|consen 217 SLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPD----IVTMGKPMG-NGHPVAAVA 291 (452)
T ss_pred HHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccc----hheecccCC-CCCeeeEEe
Confidence 44555677664 55789999999999999999999987765443221111 221344 446899998 999999999
Q ss_pred eeccccccCCchhHHHHHH--HHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeeCC
Q 013521 300 VPEELRYSNGYPVIKDFNR--IVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL--GLKVNGG 375 (441)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~ 375 (441)
+.+++ .+.+.. +.-+...+.++.+.+++++.++.-.. +++.++-++--.+|...|++. ..++.+.
T Consensus 292 ttkeI--------A~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~---E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGD 360 (452)
T KOG1403|consen 292 TTKEI--------AQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCED---ENLQEHAQQVGEKLEVLLRRLKQKHECIGD 360 (452)
T ss_pred ccHHH--------HHHhccccceehhccCCCchhHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHhhhccceec
Confidence 88877 344432 22233445778888888887762212 444455555556666666654 2333332
Q ss_pred C--CceEEEEEcCC---------CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhh
Q 013521 376 K--NAPYVWVQFPG---------SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNF 440 (441)
Q Consensus 376 ~--~~~~~~~~~~~---------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~ 440 (441)
- -|.|+=+++-. ......+.++.+.++|+++.-. +..+-+.|- ++-++++.++.+..|.++
T Consensus 361 vRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG----Ph~NilKiKPPmCFneena~e~v~~ld~i 434 (452)
T KOG1403|consen 361 VRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG----PHRNILKIKPPMCFNEENADEFVLGLDEI 434 (452)
T ss_pred cccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCC----CCCceeecCCCcccChhhHHHHHHHHHHH
Confidence 2 36677677631 1223456777777889987532 234445544 233566666666655544
No 387
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.10 E-value=0.00025 Score=65.33 Aligned_cols=197 Identities=14% Similarity=0.141 Sum_probs=113.2
Q ss_pred ccEEEEcCC-CCccc-cCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCC--CCcccccCCCcceeEEEecCCcccCC
Q 013521 215 TDIIFFCSP-NNPTG-HAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPS--PRSIYEIPGAREVAIEISSFSKFAGF 290 (441)
Q Consensus 215 ~~~v~i~~p-~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~~~ 290 (441)
+-+-+|..| +.--| .-.|++..+++.+++++|++.+|+||+.......+. .+--+.++..+| +-+|||-|-
T Consensus 271 pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD----~vTFSKK~q- 345 (484)
T KOG1405|consen 271 PVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPD----VVTFSKKFQ- 345 (484)
T ss_pred CeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCcc----ceehhhhhh-
Confidence 444455677 66566 346999999999999999999999999875444432 122233433334 447999884
Q ss_pred ccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHH-HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 013521 291 TGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIV-QAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSLG 369 (441)
Q Consensus 291 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 369 (441)
.| ||..- +++.. -+.++.+.+.+.. ++... ...+...+++ +.+.+..+.--+.|...|.++.
T Consensus 346 ~g---Gffh~-~~frp------n~pYrifNTWmGd-P~k~lll~~vv~~I~~------~~Ll~n~~~vG~~l~~gL~~Lq 408 (484)
T KOG1405|consen 346 TG---GFFHD-EEFRP------NEPYRIFNTWMGD-PSKNLLLEEVVQEIKR------EDLLNNVAHVGKALLKGLLELQ 408 (484)
T ss_pred cC---ccccC-cccCC------CchHHHhhhhcCC-hHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 66 66543 33321 1233333332222 22222 2223333332 4445555556677777776651
Q ss_pred ------CeeeCCCCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEE--eecCHHHHHHHHHHHHhh
Q 013521 370 ------LKVNGGKNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVS--AFGHREYISEACRRLKNF 440 (441)
Q Consensus 370 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls--~~~~~~~~~~~l~~l~~~ 440 (441)
+.-.. ..|.|+.++++...-.+.+...++.+|+.+- .-+...||+- +.-.+...+-.++++.++
T Consensus 409 ~~~p~~~~~~R-GrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~G------GCg~~siRfRPsLvf~~~Ha~i~l~~~~k~ 480 (484)
T KOG1405|consen 409 AKYPGKINNLR-GRGTFIAWDCPSGSIRDKLILIARLNGVNLG------GCGDKSIRFRPSLVFRKHHADIFLDIFDKI 480 (484)
T ss_pred HhCchhhhccc-ccceEEEEeCCChHHHHHHHHHHHHcCceec------ccccceeeeccceeehhhhHHHHHHHHHHH
Confidence 22222 2688999999855555666666777788762 2245567765 322455555566666554
No 388
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.93 E-value=0.0017 Score=61.74 Aligned_cols=284 Identities=11% Similarity=0.027 Sum_probs=137.6
Q ss_pred CCCC-CCcEEEcCCcHHH-HHH-HHHhc--CCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCc
Q 013521 131 MGIE-GDEIFISDGAQSD-ISR-LQMLL--GSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNF 205 (441)
Q Consensus 131 ~~~~-~~~I~~t~G~~~a-l~~-l~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~ 205 (441)
.|+. ....++++.+|.- +.+ +.++- ..++.|+.+.-.+-+-..++..+| .+++.|+...+++.
T Consensus 69 ~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AG------------l~~~vV~~~~~~d~ 136 (389)
T PF05889_consen 69 AGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAG------------LEPVVVENVLEGDE 136 (389)
T ss_dssp TTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-------------EEEEE-EEEETTE
T ss_pred cCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcC------------CeEEEeeccCCCCe
Confidence 3543 4567888888743 223 23332 356888888776655556666777 47777765333221
Q ss_pred c-CCCC-------C-CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcc
Q 013521 206 F-PDLS-------T-TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGARE 276 (441)
Q Consensus 206 ~-~~~~-------~-~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~ 276 (441)
. .+++ + .+...+.++++++---|.. .+++++|+++|++||+..|+..+|+- .....-..+........
T Consensus 137 l~td~~~ie~~i~~~G~~~iLcvltttscfapr~--~D~i~~IakiC~~~~IPhlvNnAYgv-Q~~~~~~~i~~a~~~GR 213 (389)
T PF05889_consen 137 LITDLEAIEAKIEELGADNILCVLTTTSCFAPRL--PDDIEEIAKICKEYDIPHLVNNAYGV-QSSKCMHLIQQAWRVGR 213 (389)
T ss_dssp EEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT-T-HHHHHHHHHHHHHST
T ss_pred eeccHHHHHHHHHHhCCCCeEEEEEecCccCCCC--CccHHHHHHHHHHcCCceEEccchhh-hHHHHHHHHHHHHhcCC
Confidence 1 1111 1 2445666666552222222 34699999999999999999999983 10000000000000012
Q ss_pred eeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 013521 277 VAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYYKE 356 (441)
Q Consensus 277 ~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 356 (441)
..+.+.|.-|.| +-+..-+.+.++++.. +..+........ ...+.......++. .|-...........+
T Consensus 214 vda~vqS~dkNF-~VPvGgai~As~~~~~-------i~~vs~~YpGRa--s~sp~ld~~itLl~-LG~~g~~~ll~~r~~ 282 (389)
T PF05889_consen 214 VDAFVQSTDKNF-MVPVGGAIMASFDPSG-------ILAVSKEYPGRA--SASPSLDLFITLLS-LGCTGYGALLKERKA 282 (389)
T ss_dssp CSEEEEEHHHHH-CEESSHEEEEESSHHH-------HHHHHHTSHSHB--TSHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred cceeeeecCCCE-EecCCCcEEEecCHHH-------HHHHHHHhhhhh--hcccchHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 237899999988 5665555666655432 333333222222 22233333334443 222222333333344
Q ss_pred HHHHHHHHHH----hCCCeeeC-CCCceEEEEEcCCC-----Ch-HHHHHHHHHhcCeE----EeCCCCcC-----CCCC
Q 013521 357 NAKIIVDAFQ----SLGLKVNG-GKNAPYVWVQFPGS-----SS-WDVFAEILEKTHIL----TIPGSGFG-----PGGN 416 (441)
Q Consensus 357 ~~~~l~~~L~----~~g~~~~~-~~~~~~~~~~~~~~-----~~-~~~~~~ll~~~gi~----v~pg~~f~-----~~~~ 416 (441)
...++.+.|+ +.+-.+.. |.+-..+.+.++.. .+ ..+..+|..+ ||. |.|+..+. .-..
T Consensus 283 ~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R-~VsG~RvV~~~~~~~tsh~~~yp~ 361 (389)
T PF05889_consen 283 SFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKR-GVSGIRVVTPGGKKQTSHSSNYPC 361 (389)
T ss_dssp HHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHT-TEESSEEEETSSCEEETTSS--SS
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhC-CcccceeeccCCCcccccCCCCch
Confidence 4444444444 33544322 23444455565521 12 3444555544 664 44443331 1113
Q ss_pred CeEEEE--eecCHHHHHHHHHHHHhhC
Q 013521 417 EHIRVS--AFGHREYISEACRRLKNFL 441 (441)
Q Consensus 417 ~~iRls--~~~~~~~~~~~l~~l~~~l 441 (441)
.++-++ ++.+++|++..+++|.+++
T Consensus 362 ~Ylt~AsaiG~~~eevd~~v~rL~k~i 388 (389)
T PF05889_consen 362 PYLTAASAIGMTREEVDYFVKRLDKII 388 (389)
T ss_dssp SEEEEEE-TT--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 678774 3558999999999999864
No 389
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.69 E-value=0.007 Score=54.98 Aligned_cols=335 Identities=13% Similarity=0.137 Sum_probs=178.8
Q ss_pred CCCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCC---CCCCCCCC-cCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH
Q 013521 71 DARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVK---GYKGYGAE-QGNMALRTAIADKFYKDMGIEGDEIFISDGAQS 146 (441)
Q Consensus 71 ~~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~---~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~ 146 (441)
++++|.|.-+..++ .|......+.+.+.....-. ...+--|+ .+......-++.. .|...++|.+.|.-+-
T Consensus 65 d~~~iYlcGNSLGL-mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~i----VGA~e~EvavmNsLTv 139 (465)
T KOG3846|consen 65 DKPVIYLCGNSLGL-MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPI----VGAQENEVAVMNSLTV 139 (465)
T ss_pred CCCeEEEecccccc-CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhh----ccCCchhhhhHhhhhh
Confidence 45678887666544 45566666666655443111 11111121 2334444444444 5888999999999999
Q ss_pred HHHH-HHHhcCCC---CEEEEeCCCchhh----HhHHHHhccccccccccCccceeEEeecCCCCC-c-cCC----CCC-
Q 013521 147 DISR-LQMLLGSN---VTVAVQDPSFPAY----IDTSVIVGQAGKFLKETGKYRNIVYMNCRPENN-F-FPD----LST- 211 (441)
Q Consensus 147 al~~-l~~l~~~g---d~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~-~-~~~----~~~- 211 (441)
.+.. +..+.+|- -+|+++.-.||+= ...++.-|... . -..+.+...+.+. + ..| +++
T Consensus 140 Nlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~----e----~sm~~iePREGEetlRteDILd~IEkn 211 (465)
T KOG3846|consen 140 NLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISP----E----NSMIQIEPREGEETLRTEDILDTIEKN 211 (465)
T ss_pred HHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCCh----H----HheEEecccccccchhHHHHHHHHHhc
Confidence 9987 57777775 3799998888773 33344444321 1 1233333332111 1 111 122
Q ss_pred CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCc
Q 013521 212 TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFT 291 (441)
Q Consensus 212 ~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~ 291 (441)
.....+|+++-.|.-||+.++ +.+|...-+..|.+|=.|-+|.. +..|..+- .++..+.+..--|-++..
T Consensus 212 gDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv---gNVpL~LH----dWgVDFACWCSYKYlnaG 281 (465)
T KOG3846|consen 212 GDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV---GNVPLQLH----DWGVDFACWCSYKYLNAG 281 (465)
T ss_pred CCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh---cCCceEEe----ecCCceEEEeeecccccC
Confidence 244566666677999999999 77887555567888889988762 22233222 245668888888876532
Q ss_pred cceeEEEEeeccccccCCchhHHHHHH-----H------------HhhhcCCCcHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 013521 292 GVRLGWTVVPEELRYSNGYPVIKDFNR-----I------------VCTCFNGASNIVQAGGLACLSPDGFQALRTVIDYY 354 (441)
Q Consensus 292 G~r~G~l~~~~~~~~~~~~~~~~~~~~-----~------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 354 (441)
.=.||-+.+.++......+++...|.. + ......+++.+...+..+.|+- + -+...+.+
T Consensus 282 aGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~--F--~q~~~~~l 357 (465)
T KOG3846|consen 282 AGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLEL--F--AQFNINEL 357 (465)
T ss_pred CCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHH--H--HHhhHHHH
Confidence 223665566555542222221111110 0 0011122333433333333321 1 12223444
Q ss_pred HHHHHHHHHHHHh----C-CC-----------eeeCC----CCceEEEEEcCCCChHHHHHHHHHhcCeEEeCCCCcCCC
Q 013521 355 KENAKIIVDAFQS----L-GL-----------KVNGG----KNAPYVWVQFPGSSSWDVFAEILEKTHILTIPGSGFGPG 414 (441)
Q Consensus 355 ~~~~~~l~~~L~~----~-g~-----------~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~ 414 (441)
+++.-++...|+. . |. ....| +.|..+.+.+.. .....+.+|-+ +|+.+- ..
T Consensus 358 RkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-p~~~vfqeL~k-rGv~~D------kR 429 (465)
T KOG3846|consen 358 RKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-PTPKVFQELHK-RGVIGD------KR 429 (465)
T ss_pred hhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC-CchHHHHHHHH-cCeecc------cc
Confidence 4444333333322 1 21 12222 346666666653 23466677554 598762 33
Q ss_pred CCCeEEEE---eecCHHHHHHHHHHHHhh
Q 013521 415 GNEHIRVS---AFGHREYISEACRRLKNF 440 (441)
Q Consensus 415 ~~~~iRls---~~~~~~~~~~~l~~l~~~ 440 (441)
.++.||++ ++++-.++-.++..|.++
T Consensus 430 ~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~ 458 (465)
T KOG3846|consen 430 RPNVIRVAPVPLYNTFSDVYIFVNALNEA 458 (465)
T ss_pred CCCceEeecchhhccHHHHHHHHHHHHHH
Confidence 57889999 477778888777777664
No 390
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.54 E-value=0.0057 Score=58.06 Aligned_cols=287 Identities=13% Similarity=0.168 Sum_probs=153.2
Q ss_pred hCCCCCCcEEEcCCcHHHHHHHH-H-h-cCCC----------CEEE-EeCCCchhhHhHHHHhccccccccccCccceeE
Q 013521 130 DMGIEGDEIFISDGAQSDISRLQ-M-L-LGSN----------VTVA-VQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIV 195 (441)
Q Consensus 130 ~~~~~~~~I~~t~G~~~al~~l~-~-l-~~~g----------d~Vl-v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~ 195 (441)
++....|.|+--.|+.+.+..+. + . .-|+ +-|+ ..+-+|.++...++.+|. |. -.++
T Consensus 155 Gw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~-gt--------d~c~ 225 (510)
T KOG0629|consen 155 GWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGL-GT--------DHCI 225 (510)
T ss_pred CCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhcc-CC--------ceeE
Confidence 44434467776677777776532 1 1 1122 3344 466688888899988883 11 3788
Q ss_pred EeecCCCCCccCC-CCC-----CC--CccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCcEEEEcccccc-cccCCCC
Q 013521 196 YMNCRPENNFFPD-LST-----TS--RTDIIFFCSP-NNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA-YITDPSP 265 (441)
Q Consensus 196 ~v~~~~~~~~~~~-~~~-----~~--~~~~v~i~~p-~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~-~~~~~~~ 265 (441)
.|+.+..+...++ +++ .. .+-+++=++. ..-.|+.=| +..|+++|++|++|+.+|.+|+. +......
T Consensus 226 ~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~~lWmHvDAAwGGglLmS~k~ 302 (510)
T KOG0629|consen 226 KVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKHKLWMHVDAAWGGGLLMSRKH 302 (510)
T ss_pred EecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhcCEEEEeecccccccccChhh
Confidence 8888876655443 432 11 2233332233 445576655 88999999999999999999986 2222222
Q ss_pred CcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHh-----------hhcCCCcHHHHHH
Q 013521 266 RSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVC-----------TCFNGASNIVQAG 334 (441)
Q Consensus 266 ~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~a 334 (441)
... +.+...---+-.+.+|..| +.+.++......+-+ ..+...... .+..+..-..|..
T Consensus 303 R~k--l~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gl-------l~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCG 372 (510)
T KOG0629|consen 303 RHK--LTGIERANSVTWNPHKLMG-APLQCSAFLTREEGL-------LQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCG 372 (510)
T ss_pred Hhh--ccCccccCceeecHHHhhc-CcchhhHHHHHHHHH-------HHhhcccchhhhhccCceeecccccccchhhcC
Confidence 222 2111111134556789998 888888776655442 111100000 0001111112211
Q ss_pred -----H-H-HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCee-eC--CCCceEEEEEcCC----C-ChH-------
Q 013521 335 -----G-L-ACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKV-NG--GKNAPYVWVQFPG----S-SSW------- 391 (441)
Q Consensus 335 -----~-~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~--~~~~~~~~~~~~~----~-~~~------- 391 (441)
. . -.++..++...++..+++-+.++++.+.|++. +... .. |+-.++.+..+|. . .+.
T Consensus 373 Rh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~ 452 (510)
T KOG0629|consen 373 RHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLV 452 (510)
T ss_pred ccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHH
Confidence 0 1 12234556667888899999999999999987 4333 22 2212222222221 1 111
Q ss_pred ----HHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec---CHHHHHHHHHHHHhh
Q 013521 392 ----DVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG---HREYISEACRRLKNF 440 (441)
Q Consensus 392 ----~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~---~~~~~~~~l~~l~~~ 440 (441)
..-..++++ |-.... ..--...++++|+.+.+ +.++++-+++.|.++
T Consensus 453 kVaPkIK~~Mm~~-Gt~Mi~-YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 453 KVAPKIKERMMKK-GTTMIG-YQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred hhCcHHHHHHHhc-cceeeE-ecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 122333333 543321 11112246899998744 567888887777653
No 391
>COG1725 Predicted transcriptional regulators [Transcription]
Probab=97.52 E-value=2.7e-05 Score=61.59 Aligned_cols=33 Identities=12% Similarity=-0.053 Sum_probs=29.6
Q ss_pred CCCCCCCCcccchhhhHHhhhhCCC--CCcccccccccc
Q 013521 7 HPKCSTTPLKATVPFTMDFFLSSRW--PVPRHCTEVSRN 43 (441)
Q Consensus 7 ~~~~~~~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~ 43 (441)
+.+|+ .+||.|||.+|+.+|+ ++.|.|+||+..
T Consensus 44 ~~~VN----pnTv~raY~eLE~eG~i~t~rg~G~fV~~~ 78 (125)
T COG1725 44 DLGVN----PNTVQRAYQELEREGIVETKRGKGTFVTED 78 (125)
T ss_pred HhCCC----HHHHHHHHHHHHHCCCEEEecCeeEEEcCC
Confidence 45666 9999999999999999 999999999853
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.33 E-value=0.026 Score=56.52 Aligned_cols=317 Identities=17% Similarity=0.234 Sum_probs=159.4
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCCCcC--cHHHHHHHHHHH---hhhCCCCCCcEEEc-CCcHHHHHH
Q 013521 77 LGIGDTTQPIPDIITSAMAEHAFALSTVKGYKGYGAEQG--NMALRTAIADKF---YKDMGIEGDEIFIS-DGAQSDISR 150 (441)
Q Consensus 77 l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~l---~~~~~~~~~~I~~t-~G~~~al~~ 150 (441)
.+.|-++.-.|+.+.+-+-+ + ...+.+|+|.+- .+.--|.+-.|- ....|.+-.|--+. -|+.+|-..
T Consensus 123 IGmGYyn~~vP~~I~RNile---n---p~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm 196 (1001)
T KOG2040|consen 123 IGMGYYNTHVPAVILRNILE---N---PGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAM 196 (1001)
T ss_pred hccccccccCcHHHHHHhhh---C---CcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHH
Confidence 34555555567765544433 2 245566766321 111122222221 12234443333333 344433333
Q ss_pred -HHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCcccc
Q 013521 151 -LQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGH 229 (441)
Q Consensus 151 -l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~ 229 (441)
+..-...+.+.++...+|+.....++.... +. -++++..+... .+. ..+++..+++..|.. -|.
T Consensus 197 ~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~-~~-------~i~v~~~~~~~-----~~~-s~~~v~gvlvQYP~t-~G~ 261 (1001)
T KOG2040|consen 197 ALCNRINKRKKFVVDSNCHPQTLSVVKTRAK-GF-------GIKVVVSDIKE-----ADY-SSKDVSGVLVQYPDT-EGS 261 (1001)
T ss_pred HHHHhhcccceEEecCCCCcchhhhhhcccc-cc-------ceeEEecCHHH-----hhc-cccceeEEEEEcCCC-CCc
Confidence 222345666799999999987776654321 10 01222221110 111 124577777767654 688
Q ss_pred CCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcc---cCCccceeEEEEeeccccc
Q 013521 230 AATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKF---AGFTGVRLGWTVVPEELRY 306 (441)
Q Consensus 230 ~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~---~~~~G~r~G~l~~~~~~~~ 306 (441)
+.+ ..++++.+++.+.++++--- +. ...+..-++..+-.|.+||-..+ +|..|.-.||+.+.+++.+
T Consensus 262 i~d---~~el~~~a~~~~s~vv~atD---LL----aLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R 331 (1001)
T KOG2040|consen 262 VLD---FDELVELAHANGSLVVMATD---LL----ALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVR 331 (1001)
T ss_pred ccC---HHHHHHHhhccCceEEEeeh---hh----HHHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHh
Confidence 888 77888888898887765321 11 11222222233445888875432 2333444555555555431
Q ss_pred c-------------CCchhH-------HHHHHHHhhhcCCCcHHH-HHHHHHhcC-----CCcHHHHHHHHHHHHHHHHH
Q 013521 307 S-------------NGYPVI-------KDFNRIVCTCFNGASNIV-QAGGLACLS-----PDGFQALRTVIDYYKENAKI 360 (441)
Q Consensus 307 ~-------------~~~~~~-------~~~~~~~~~~~~~~~~~~-~~a~~~~l~-----~~~~~~~~~~~~~~~~~~~~ 360 (441)
. .+..++ +.+++-+. +|.+. ..|.++-+. -.+-..++.+..+.......
T Consensus 332 ~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKA-----TSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~ 406 (1001)
T KOG2040|consen 332 MMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKA-----TSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLI 406 (1001)
T ss_pred hCCCceEeeeecccccHHHHHHHHHHHHHhhhhcc-----chhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHH
Confidence 1 000000 01111111 22221 111111111 02234567777777777888
Q ss_pred HHHHHHhCCCeeeCCCCceEEEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec--CHHHHHHHHHHH
Q 013521 361 IVDAFQSLGLKVNGGKNAPYVWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG--HREYISEACRRL 437 (441)
Q Consensus 361 l~~~L~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~~~~~~l~~l 437 (441)
|...|+..|-++.. ..+|-.+++. +...+++..+.+++ +|-++-- .++.|-+++.. +.++++.++..+
T Consensus 407 l~~~l~~aghel~~--k~fFDTLkI~~~~s~~~~l~rA~~~-~iNlr~~------ed~tigvslDETv~~~DvddLl~vf 477 (1001)
T KOG2040|consen 407 LAEGLKNAGHELQH--KPFFDTLKIRCGCSAEEVLDRAAKR-QINLRLV------EDGTIGVSLDETVTEKDVDDLLWVF 477 (1001)
T ss_pred HHHHHhhcchhhcc--ccccceEEEEecCcHHHHHHHHHhh-cCceEEe------ecCceEEeecccccHHHHHHHHHHH
Confidence 88899887766543 3467555554 33566777776665 6765432 35668888743 678899888776
Q ss_pred H
Q 013521 438 K 438 (441)
Q Consensus 438 ~ 438 (441)
.
T Consensus 478 ~ 478 (1001)
T KOG2040|consen 478 N 478 (1001)
T ss_pred c
Confidence 4
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.08 E-value=0.14 Score=46.33 Aligned_cols=324 Identities=15% Similarity=0.234 Sum_probs=166.3
Q ss_pred CCeEEeCCCCCCCCCcHHHHHHHHHHHhhccCCCCC-----CCCCCCcCcHHHHHHHHHHHhhhCCCCCC-cEEE-cCCc
Q 013521 72 ARLIRLGIGDTTQPIPDIITSAMAEHAFALSTVKGY-----KGYGAEQGNMALRTAIADKFYKDMGIEGD-EIFI-SDGA 144 (441)
Q Consensus 72 ~~~i~l~~g~~~~~~~~~~~~al~~~~~~~~~~~~~-----~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~I~~-t~G~ 144 (441)
..++||+.|.- ..|+.++..+++-+-++.. .++ .+. +.....+.+.--..+++.++++.+ .|++ -.|+
T Consensus 6 ~~vvnFaaGPA--klp~~VL~e~qkdl~n~~g-~GisV~EmSHR--sk~f~kii~~tes~lreLlniPdn~~vlf~QGGG 80 (370)
T KOG2790|consen 6 ERVVNFAAGPA--KLPESVLLEAQKDLLNFNG-SGISVMEMSHR--SKDFAKIINDTESLLRELLNIPDNYKVLFLQGGG 80 (370)
T ss_pred cceeecCCCcc--cCCHHHHHHHHHHhhccCC-CcceEEEeccc--chhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCC
Confidence 35899988853 3567777777776666542 111 122 223333433333334444466544 5554 4445
Q ss_pred HHHHHH-HHHhc--CCC---CEEEEeCCCchh--hHhHHHHhccccccccccCccceeEEeecCCCC-CccCC---CCCC
Q 013521 145 QSDISR-LQMLL--GSN---VTVAVQDPSFPA--YIDTSVIVGQAGKFLKETGKYRNIVYMNCRPEN-NFFPD---LSTT 212 (441)
Q Consensus 145 ~~al~~-l~~l~--~~g---d~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~---~~~~ 212 (441)
+..+.. ...++ +.| |.|+.- +|.. +.+ ++.+|. ...+..+..... +-.+| ++..
T Consensus 81 t~qFaAv~lNL~glK~g~~AdYiVTG--sWS~KA~~E-Akk~~~-----------~~~V~~~~k~y~ygkvPd~~~w~~~ 146 (370)
T KOG2790|consen 81 TGQFAAVPLNLIGLKHGRCADYVVTG--SWSAKAAEE-AKKYGT-----------PNIVIPKLKSYTYGKVPDPSTWELN 146 (370)
T ss_pred cccccccchhhhccccCCccceEEec--cccHHHHHH-HHhhCC-----------ceEEeccccccccCcCCChhhcccC
Confidence 554544 34444 455 555543 3432 222 222332 122222222211 11122 2334
Q ss_pred CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCcc
Q 013521 213 SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFTG 292 (441)
Q Consensus 213 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G 292 (441)
++.+.+|+|.-..--|+-++. +- +-.-++.++|+|-... |... |..+..+ -++..+..|.+|.+|
T Consensus 147 ~da~yvyyCaNETVHGVEf~~-----~P-~~~~~~~vlVaDmSSn-flSr--pvDvsk~------gvi~aGAQKN~G~aG 211 (370)
T KOG2790|consen 147 PDASYVYYCANETVHGVEFDF-----IP-VNDPKGAVLVADMSSN-FLSR--PVDVSKF------GVIFAGAQKNVGPAG 211 (370)
T ss_pred CCccEEEEecCceeeceecCC-----CC-CCCCCCceEEEecccc-hhcC--Cccchhc------ceEEeccccccCccc
Confidence 677788888433334544431 11 1124577888885433 4322 3322222 266778999999888
Q ss_pred ceeEEEEeeccccccCC---chhHHHHHH--HHhhhcCCCcHHH----HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Q 013521 293 VRLGWTVVPEELRYSNG---YPVIKDFNR--IVCTCFNGASNIV----QAGGLACLSPDGFQALRTVIDYYKENAKIIVD 363 (441)
Q Consensus 293 ~r~G~l~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~----~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 363 (441)
+-.++..++++.... +... .+.. -....+++++.++ -.+...++++++. ..+.+.-.++.+.+++
T Consensus 212 --~Tvvivr~dllg~~~~~tP~v~-dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl---~a~e~~n~~KskllYd 285 (370)
T KOG2790|consen 212 --VTVVIVRKDLLGNALDITPSVL-DYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGL---AAMEKLNQEKSKLLYD 285 (370)
T ss_pred --cEEEEEehhhhcccccCCcccc-ceeeeccccccccCCCeeeeeehhhHHHHHHhcccH---HHHHHHHHHHHHHHHH
Confidence 455667777752210 0000 0000 0111222233222 2334455555555 5666677788999999
Q ss_pred HHHhC-CCeeeC----CCCceEEEEEcC-CCChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec--CHHHHHHHHH
Q 013521 364 AFQSL-GLKVNG----GKNAPYVWVQFP-GSSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG--HREYISEACR 435 (441)
Q Consensus 364 ~L~~~-g~~~~~----~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~--~~~~~~~~l~ 435 (441)
.+.+. |+-..+ ...-+.+.+++. ..-+.+|+....++ +..-.-|.. .-+.||.|+++ +-++.+.++.
T Consensus 286 ~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKGhR----SVGGiRASlYNAisv~~~q~L~~ 360 (370)
T KOG2790|consen 286 AIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKE-HMVQLKGHR----SVGGIRASLYNAISVEEVQKLAA 360 (370)
T ss_pred HHHhcCCeEEcccchhhhhhcccceeecchHHHHHHHHHHHHh-hhhcccccc----ccccchhhhhccccHHHHHHHHH
Confidence 99987 654322 123456777776 22345666666666 444333432 24579999855 7888888888
Q ss_pred HHHhh
Q 013521 436 RLKNF 440 (441)
Q Consensus 436 ~l~~~ 440 (441)
-|+++
T Consensus 361 ~m~~F 365 (370)
T KOG2790|consen 361 FMKEF 365 (370)
T ss_pred HHHHH
Confidence 77764
No 394
>PLN02672 methionine S-methyltransferase
Probab=96.97 E-value=0.011 Score=64.23 Aligned_cols=227 Identities=10% Similarity=0.075 Sum_probs=130.3
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhh--hCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCC
Q 013521 90 ITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYK--DMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPS 167 (441)
Q Consensus 90 ~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~--~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~ 167 (441)
.+..+...+.+ ..+.-|.++.|...+|+.||.|+.. ++.+++++|++.+.-..|+.-.+.++.|.=.++=+..+
T Consensus 406 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1082)
T PLN02672 406 FLAYLASALKG----LSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLT 481 (1082)
T ss_pred HHHHHHHHHcc----CCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhh
Confidence 34556666654 6677898999999999999999976 66778999999999999997554444443111111111
Q ss_pred chhhHhHHHHhcccc--ccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHH
Q 013521 168 FPAYIDTSVIVGQAG--KFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKA 245 (441)
Q Consensus 168 y~~~~~~~~~~g~~~--~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~ 245 (441)
-+--..+...+...+ ..... ...+.|+.-|.. .+....+.+.-++++|+..-.+ +-..+....+.|++.+++
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 555 (1082)
T PLN02672 482 RWLPKKWLTSLAIENATSDSKS-DDVITVIEAPRQ--SDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAE 555 (1082)
T ss_pred ccCCHHHHhHhhhhcccccCcc-CCeEEEEeCCCc--chHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHh
Confidence 111122222222111 00000 011223322222 2222333344678887764332 222345668999999999
Q ss_pred cCcEEEEccccc-ccccCCCCCccccc---CCCcceeEEEecCCcccCCccceeEEEEeeccccccCCchhHHHHHHHHh
Q 013521 246 NGSIIVYDSAYA-AYITDPSPRSIYEI---PGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGYPVIKDFNRIVC 321 (441)
Q Consensus 246 ~~~~ii~De~~~-~~~~~~~~~~~~~~---~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~ 321 (441)
-|..++.|..-. ++..-..+..+..+ ...+.+..++.++-|.-=.+.+-+.+++.-++-+ .+.+.....
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 628 (1082)
T PLN02672 556 IGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAV-------LKALSKTGE 628 (1082)
T ss_pred hCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHH-------HHHHHHHHH
Confidence 999999997633 33322223333332 1235566778889887656999999999766654 344443333
Q ss_pred hhcCCCcHHHHH
Q 013521 322 TCFNGASNIVQA 333 (441)
Q Consensus 322 ~~~~~~~~~~~~ 333 (441)
.....++.+.|.
T Consensus 629 ~~~~~~~~~~~~ 640 (1082)
T PLN02672 629 VLEGRTAIISQF 640 (1082)
T ss_pred hhccchHHHHHH
Confidence 333344555553
No 395
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=96.97 E-value=0.11 Score=50.17 Aligned_cols=308 Identities=14% Similarity=0.131 Sum_probs=152.6
Q ss_pred CCCCcCcHHHHHHHHHHHhhhCCCC----------CCcEEEcCCcHHHHHH-HHH----h--cCCCC------------E
Q 013521 110 YGAEQGNMALRTAIADKFYKDMGIE----------GDEIFISDGAQSDISR-LQM----L--LGSNV------------T 160 (441)
Q Consensus 110 Y~~~~g~~~lr~~ia~~l~~~~~~~----------~~~I~~t~G~~~al~~-l~~----l--~~~gd------------~ 160 (441)
+...+-..+|..-+-+||.+.++++ .--|+..+.+-+.+-. +.+ + ++.++ .
T Consensus 105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV 184 (511)
T KOG0628|consen 105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLV 184 (511)
T ss_pred eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhhe
Confidence 3345678899999999997644432 3345555554443332 211 1 23332 3
Q ss_pred EEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCC-C----CC---CCCccEEEEcCCCCccccCCC
Q 013521 161 VAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPD-L----ST---TSRTDIIFFCSPNNPTGHAAT 232 (441)
Q Consensus 161 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~----~~---~~~~~~v~i~~p~NPtG~~~~ 232 (441)
+.+.+.++.++...+...| +++..++.+.+.+...+ + ++ ..-+-.+++.+-. |..+-.
T Consensus 185 ~Y~SDqahssveka~~i~~------------VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G--TT~~ca 250 (511)
T KOG0628|consen 185 AYCSDQAHSSVEKACLIAG------------VKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG--TTSSCA 250 (511)
T ss_pred EEecCcccchHHHhHhhcc------------eeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec--Cccccc
Confidence 5567788888888777777 57888888763332222 1 11 1223333332432 222335
Q ss_pred HHHHHHHHHHHHHcCcEEEEcccccccccCCC-CCcccccCCCcceeEEEecCCcccCCccceeEEEEeeccccccCCc-
Q 013521 233 WQQLKKLVEFAKANGSIIVYDSAYAAYITDPS-PRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYSNGY- 310 (441)
Q Consensus 233 ~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~~~~G~r~G~l~~~~~~~~~~~~- 310 (441)
-+++.+|..+|+++|+|+.+|.+|+.-.+--+ ...+.. +...-.-+-.-.||++ +.-+-+.-+-..+..-.....
T Consensus 251 ~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~r--Gie~aDSfn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~ 327 (511)
T KOG0628|consen 251 FDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMR--GIEYADSFNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFN 327 (511)
T ss_pred cccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhh--cchhhccccCChhhee-EEeeeeecceeecCceeeeeee
Confidence 67899999999999999999999995333211 111111 1100001122235554 244333322222220000000
Q ss_pred ----hhHHHHHHH-HhhhcCCCcH---HHHHHHHHhcCCCcHHHHHHHHHHHHH---HHHHHHHHHHhC-CCeeeCCCCc
Q 013521 311 ----PVIKDFNRI-VCTCFNGASN---IVQAGGLACLSPDGFQALRTVIDYYKE---NAKIIVDAFQSL-GLKVNGGKNA 378 (441)
Q Consensus 311 ----~~~~~~~~~-~~~~~~~~~~---~~~~a~~~~l~~~~~~~~~~~~~~~~~---~~~~l~~~L~~~-g~~~~~~~~~ 378 (441)
.+....... .....+..+. +-..-.--.++..+ .+.+++++++ ..+.+.+.+.+- .+++..+.-=
T Consensus 328 vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~G---ve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~l 404 (511)
T KOG0628|consen 328 VDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYG---VENLQNYIREHVRLAKEFETLVRADPRFEIVNKRIL 404 (511)
T ss_pred cChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccccc
Confidence 000000000 0000000110 10000000111111 2333333333 233333333322 4666554443
Q ss_pred eEEEEEcCC--CChHHHHHHHHHhcCeEEeCCCCcCCCCCCeEEEEeec---CHHHHHHHHHHHHhh
Q 013521 379 PYVWVQFPG--SSSWDVFAEILEKTHILTIPGSGFGPGGNEHIRVSAFG---HREYISEACRRLKNF 440 (441)
Q Consensus 379 ~~~~~~~~~--~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~iRls~~~---~~~~~~~~l~~l~~~ 440 (441)
-.+++++++ ...+.+..++-....|.+.|.+. .+.-.+|++++. +.++++++.+.|.+.
T Consensus 405 gLvcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~l---~gk~vlRf~V~s~~t~~~di~~a~~~I~~~ 468 (511)
T KOG0628|consen 405 GLVCFRLKGDNEINEALLNRLNSSGRIHLVPASL---HGKFVLRFAVCSPLTNESDIDEAWKIIFEA 468 (511)
T ss_pred ceeEEeecCCcHHHHHHHHHHHhcCcEEEEEeee---cceEEEEEEecCCCCcHHHHHHHHHHHHHH
Confidence 457888874 34567888888888899988653 345579999754 578899998888763
No 396
>PRK10079 phosphonate metabolism transcriptional regulator PhnF; Provisional
Probab=96.54 E-value=0.00092 Score=60.94 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=28.1
Q ss_pred CCcccchhhhHHhhhhCCC--CCcccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSRN 43 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~ 43 (441)
+++|.||-+|+++|++||+ .+.|+||||+..
T Consensus 46 ~VSR~TVR~Al~~L~~eGli~r~~G~GtfV~~~ 78 (241)
T PRK10079 46 EVNRHTLRRAIDQLVEKGWVQRRQGVGVLVLMR 78 (241)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCCEEEEecC
Confidence 4559999999999999999 999999999753
No 397
>TIGR02325 C_P_lyase_phnF phosphonates metabolism transcriptional regulator PhnF. All members of the seed alignment for this family are predicted helix-turn-helix transcriptional regulatory proteins of the broader gntR and are found associated with genes for the import and degradation of phosphonates and/or related compounds (e.g. phosphonites) with a direct C-P bond.
Probab=96.41 E-value=0.0022 Score=58.36 Aligned_cols=31 Identities=13% Similarity=-0.008 Sum_probs=28.1
Q ss_pred CCcccchhhhHHhhhhCCC--CCcccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSRN 43 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~ 43 (441)
+++|.||-+|+++|+.+|+ .+.|+||||+..
T Consensus 43 ~VSR~TvR~Al~~L~~eGli~r~~G~GtfV~~~ 75 (238)
T TIGR02325 43 GVNRHTVRRAIAALVERGLLRAEQGRGTFVAAR 75 (238)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCCEEEECCC
Confidence 4559999999999999999 999999999754
No 398
>TIGR02404 trehalos_R_Bsub trehalose operon repressor, B. subtilis-type. This family consists of repressors of the GntR family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gram-positive lineages and does not include the TreR from E. coli.
Probab=96.39 E-value=0.0013 Score=59.59 Aligned_cols=30 Identities=10% Similarity=0.163 Sum_probs=27.6
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
+++|.||-+|+++|+++|+ .+.|+||||+.
T Consensus 35 gVSR~TVR~Al~~L~~eGli~r~~G~GTfV~~ 66 (233)
T TIGR02404 35 GASRETVRKALNLLTEAGYIQKIQGKGSIVLN 66 (233)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEeCCceEEEec
Confidence 4559999999999999999 99999999975
No 399
>PRK14999 histidine utilization repressor; Provisional
Probab=96.27 E-value=0.0016 Score=59.29 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=27.6
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
+++|.||-+|+++|+.||+ .++|+||||+.
T Consensus 47 gVSR~TVR~Al~~L~~eGli~r~~GkGTfV~~ 78 (241)
T PRK14999 47 GFSRMTINRALRELTDEGWLVRLQGVGTFVAE 78 (241)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCcEEEECC
Confidence 4559999999999999999 99999999975
No 400
>PRK11402 DNA-binding transcriptional regulator FrlR; Provisional
Probab=96.27 E-value=0.0016 Score=59.27 Aligned_cols=31 Identities=10% Similarity=-0.025 Sum_probs=27.9
Q ss_pred CCcccchhhhHHhhhhCCC--CCcccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSRN 43 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~ 43 (441)
+++|.||-+|+++|+++|+ .+.|+||||+..
T Consensus 44 ~VSR~TvR~Al~~L~~eGli~r~~G~GTfV~~~ 76 (241)
T PRK11402 44 NVSRITIRKAISDLVADGVLIRWQGKGTFVQSQ 76 (241)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCceeEECCC
Confidence 4559999999999999999 999999999753
No 401
>COG2188 PhnF Transcriptional regulators [Transcription]
Probab=96.22 E-value=0.0017 Score=58.83 Aligned_cols=29 Identities=17% Similarity=0.058 Sum_probs=27.4
Q ss_pred cccchhhhHHhhhhCCC--CCcccccccccc
Q 013521 15 LKATVPFTMDFFLSSRW--PVPRHCTEVSRN 43 (441)
Q Consensus 15 ~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~ 43 (441)
+|.||-+|+++|+++|+ .+.|+||||+..
T Consensus 44 SR~TvRkAL~~L~~eGli~r~~G~GtfV~~~ 74 (236)
T COG2188 44 SRMTVRKALDELVEEGLIVRRQGKGTFVASP 74 (236)
T ss_pred cHHHHHHHHHHHHHCCcEEEEecCeeEEcCc
Confidence 39999999999999999 999999999875
No 402
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=96.17 E-value=0.0019 Score=45.32 Aligned_cols=27 Identities=19% Similarity=0.046 Sum_probs=24.5
Q ss_pred CcccchhhhHHhhhhCCC--CCccccccc
Q 013521 14 PLKATVPFTMDFFLSSRW--PVPRHCTEV 40 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~--~~~~~g~~v 40 (441)
++|+||.+|+..|+++|+ .++++|+||
T Consensus 36 vsr~tvr~al~~L~~~g~i~~~~~~G~~V 64 (64)
T PF00392_consen 36 VSRTTVREALRRLEAEGLIERRPGRGTFV 64 (64)
T ss_dssp S-HHHHHHHHHHHHHTTSEEEETTTEEEE
T ss_pred cCCcHHHHHHHHHHHCCcEEEECCceEEC
Confidence 349999999999999999 999999987
No 403
>TIGR02018 his_ut_repres histidine utilization repressor, proteobacterial. This model represents a proteobacterial histidine utilization repressor. It is usually found clustered with the enzymes HutUHIG so that it can regulate its own expression as well. A number of species have several paralogs and may fine-tune the regulation according to levels of degradation intermediates such as urocanate. This family belongs to the larger GntR family of transcriptional regulators.
Probab=96.14 E-value=0.0021 Score=58.14 Aligned_cols=30 Identities=13% Similarity=-0.078 Sum_probs=27.7
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
+++|.||-+|+++|+.||+ .+.|+||||+.
T Consensus 36 ~VSR~TVR~Al~~L~~eGli~r~~G~GtfV~~ 67 (230)
T TIGR02018 36 GCSRMTVNRALRELTDAGLLERRQGVGTFVAE 67 (230)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCCEEEEcc
Confidence 4569999999999999999 99999999975
No 404
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.11 E-value=0.64 Score=47.04 Aligned_cols=297 Identities=13% Similarity=0.160 Sum_probs=163.9
Q ss_pred CcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHH---HHHHHHHhc-CCCC----EEEEeCCCchhhHhHHHHhcccccc
Q 013521 113 EQGNMALRTAIADKFYKDMGIEGDEIFISDGAQS---DISRLQMLL-GSNV----TVAVQDPSFPAYIDTSVIVGQAGKF 184 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~---al~~l~~l~-~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~ 184 (441)
.+|+.++-..+-++|..-.|.+.-..-..+|++. ++..|.+.+ ..|+ .-+++.-.|..-...+..+|
T Consensus 577 aqGY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Mag----- 651 (1001)
T KOG2040|consen 577 AQGYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAG----- 651 (1001)
T ss_pred HhhHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcC-----
Confidence 4688888888888886534444333344556553 455565554 3332 34566667777777888888
Q ss_pred ccccCccceeEEeecCCCCCccC-CCC----C-CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccc
Q 013521 185 LKETGKYRNIVYMNCRPENNFFP-DLS----T-TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAA 258 (441)
Q Consensus 185 ~~~~~~~~~v~~v~~~~~~~~~~-~~~----~-~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~ 258 (441)
.++++|..+..++++. ++. + ..+-.+++++.|+. -|+. ++.+++++++.++||--|..|.+-..
T Consensus 652 -------mkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMN 721 (1001)
T KOG2040|consen 652 -------MKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMN 721 (1001)
T ss_pred -------CEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCcc
Confidence 5899999988766532 221 1 35667888888854 2332 34699999999999999999998763
Q ss_pred cccCCCCCcccccCCCcceeEEEecCCcccCCc----cceeEEEEeecccccc-CCchhHH--------HHHHHHhhhcC
Q 013521 259 YITDPSPRSIYEIPGAREVAIEISSFSKFAGFT----GVRLGWTVVPEELRYS-NGYPVIK--------DFNRIVCTCFN 325 (441)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~----G~r~G~l~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~ 325 (441)
-. ..+....+..- .+.=--++|+|++| |..+|=+.+.+.+... ....++. .+..+.+..|.
T Consensus 722 Aq-----VGlc~pGd~Ga-DV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~G 795 (1001)
T KOG2040|consen 722 AQ-----VGLCRPGDIGA-DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWG 795 (1001)
T ss_pred ce-----ecccCCccccc-cceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCC
Confidence 21 12222111111 12222377777543 3445554444433200 0000111 12222223333
Q ss_pred CCc-HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCceE---EEEEcC------CCChHHHH
Q 013521 326 GAS-NIVQAGGLACLSPDGFQALRTVIDYYKENAKIIVDAFQSL-GLKVNGGKNAPY---VWVQFP------GSSSWDVF 394 (441)
Q Consensus 326 ~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~---~~~~~~------~~~~~~~~ 394 (441)
+.. .+...+.+..+-..+. ...-+.---+..++.+.|+.+ .+-+.. ..|.- +.+++. +.+..+++
T Consensus 796 sa~ILpISwaYikmMG~~GL---~~as~~AiLNaNYMakRLe~hYkil~~~-~~~~vaHEFIlD~r~fK~~agieavDvA 871 (1001)
T KOG2040|consen 796 SALILPISWAYIKMMGSGGL---KDASKIAILNANYMAKRLESHYKILFRG-ENGLVAHEFILDLRPFKKTAGIEAVDVA 871 (1001)
T ss_pred cceeehhHHHHHHHhccccc---chhhHHHhhhhHHHHHHHhhccceeEec-CCcceeeeeeeechhhccccCCcHHHHH
Confidence 222 2334455555555554 222233334677888999987 444443 34331 445553 34667788
Q ss_pred HHHHHhcCeEEeCCCCcCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 013521 395 AEILEKTHILTIPGSGFGPGGNEHIRVSA--FGHREYISEACRRLK 438 (441)
Q Consensus 395 ~~ll~~~gi~v~pg~~f~~~~~~~iRls~--~~~~~~~~~~l~~l~ 438 (441)
++|. .+|..-...++- -.+.+-|-= ..+.+++++++++|-
T Consensus 872 KRL~-DYgFHaPTmswP---V~gtLMIEPTESE~k~ElDRfcdAli 913 (1001)
T KOG2040|consen 872 KRLM-DYGFHAPTMSWP---VAGTLMIEPTESEDKAELDRFCDALI 913 (1001)
T ss_pred HHHH-hccCCCCccccc---cCCceEeccCccccHHHHHHHHHHHH
Confidence 8866 468765544431 234444432 235678888887764
No 405
>PRK09764 DNA-binding transcriptional repressor MngR; Provisional
Probab=95.78 E-value=0.0038 Score=56.82 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=28.0
Q ss_pred CCcccchhhhHHhhhhCCC--CCcccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSRN 43 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~ 43 (441)
+++|.||-+|+++|+.+|+ .+.|+||||+..
T Consensus 40 ~VSR~TvR~Al~~L~~eGli~r~~G~GtfV~~~ 72 (240)
T PRK09764 40 GVSRVTVRQALRQLVEQQILESIQGSGTYVKEE 72 (240)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCceeEEccc
Confidence 5669999999999999999 899999999753
No 406
>TIGR03337 phnR transcriptional regulator protein. This family of proteins are members of the GntR family (pfam00392) containing an N-terminal helix-turn-helix (HTH) motif. This clade is found adjacent to or inside of operons for the degradation of 2-aminoethylphosphonate (AEP) in Salmonella, Vibrio Aeromonas hydrophila, Hahella chejuensis and Psychromonas ingrahamii.
Probab=93.51 E-value=0.055 Score=48.85 Aligned_cols=31 Identities=13% Similarity=-0.002 Sum_probs=27.9
Q ss_pred CCcccchhhhHHhhhhCCC--CCcccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSRN 43 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~ 43 (441)
+++|.||.+|+++|+.+|+ .+.|+||||+..
T Consensus 36 ~Vsr~Tvr~Al~~L~~eGli~~~~g~Gt~V~~~ 68 (231)
T TIGR03337 36 NTTRVTIREALQQLEAEGLIYREDRRGWFVSPP 68 (231)
T ss_pred CCCHHHHHHHHHHHHHCCeEEEeCCCEEEECCc
Confidence 4559999999999999999 999999999753
No 407
>PRK04984 fatty acid metabolism regulator; Provisional
Probab=93.35 E-value=0.036 Score=50.39 Aligned_cols=30 Identities=13% Similarity=0.147 Sum_probs=27.5
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
+++|+||-.|+..|+.+|+ .++|+||||+.
T Consensus 42 gVSRt~VReAL~~L~~eGlv~~~~g~G~~V~~ 73 (239)
T PRK04984 42 GVTRTTLREVLQRLARDGWLTIQHGKPTKVNN 73 (239)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEeCCCeeEeCC
Confidence 4559999999999999999 99999999975
No 408
>smart00345 HTH_GNTR helix_turn_helix gluconate operon transcriptional repressor.
Probab=93.22 E-value=0.042 Score=37.56 Aligned_cols=26 Identities=19% Similarity=0.070 Sum_probs=22.9
Q ss_pred cccchhhhHHhhhhCCC--CCccccccc
Q 013521 15 LKATVPFTMDFFLSSRW--PVPRHCTEV 40 (441)
Q Consensus 15 ~~~Tv~~a~~~l~~~g~--~~~~~g~~v 40 (441)
+++||.+++..|+++|+ .++|.|++|
T Consensus 33 s~~tv~~~l~~L~~~g~i~~~~~~g~~v 60 (60)
T smart00345 33 SRTTVREALSRLEAEGLVQRRPGSGTFV 60 (60)
T ss_pred CHHHHHHHHHHHHHCCCEEEecCCeeEC
Confidence 49999999999999999 777888764
No 409
>PF14502 HTH_41: Helix-turn-helix domain
Probab=93.07 E-value=0.066 Score=34.37 Aligned_cols=27 Identities=11% Similarity=0.044 Sum_probs=23.0
Q ss_pred CcccchhhhHHhhhhCCC----CCccccccc
Q 013521 14 PLKATVPFTMDFFLSSRW----PVPRHCTEV 40 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~----~~~~~g~~v 40 (441)
.+|+||++|+..|++.|- ++..-|||+
T Consensus 18 vs~GtiQ~Alk~Le~~gaI~Le~rGh~GTfi 48 (48)
T PF14502_consen 18 VSRGTIQNALKFLEENGAIKLESRGHLGTFI 48 (48)
T ss_pred cchhHHHHHHHHHHHCCcEEeeecCcCcccC
Confidence 449999999999999998 677777874
No 410
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=92.59 E-value=1.1 Score=40.32 Aligned_cols=60 Identities=12% Similarity=0.108 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHHcCcEEEEcccccccccCCCCCcccccCCCcceeEEEecCCcccCCc
Q 013521 231 ATWQQLKKLVEFAKANGSIIVYDSAYAAYITDPSPRSIYEIPGAREVAIEISSFSKFAGFT 291 (441)
Q Consensus 231 ~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~ 291 (441)
-+++++++|..+|..|++.-|+..+|+- .....-.-+.+-.......-++.|+-|.|-+|
T Consensus 171 r~pd~leaiaaica~~diphivnnaygl-qsee~i~~iaa~~~~grida~vqsldknf~vp 230 (432)
T KOG3843|consen 171 RSPDNLEAIAAICAAHDIPHIVNNAYGL-QSEECIHKIAAAAECGRIDAFVQSLDKNFMVP 230 (432)
T ss_pred CCCchHHHHHHHHHccCchhhhcccccc-chHHHHHHHHHHhhhccHHHHHHHhhhcceee
Confidence 4678899999999999999999999983 22111111221111222336788999998554
No 411
>PRK10225 DNA-binding transcriptional repressor UxuR; Provisional
Probab=91.17 E-value=0.092 Score=48.30 Aligned_cols=30 Identities=7% Similarity=-0.163 Sum_probs=27.5
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
+++|+||-.|+..|+++|+ .++|+|+||+.
T Consensus 44 gVSRtpVREAL~~L~~eGlV~~~~~~G~~V~~ 75 (257)
T PRK10225 44 DVTRTVVREALIMLEIKGLVEVRRGAGIYVLD 75 (257)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCCEEEEeC
Confidence 4559999999999999999 89999999975
No 412
>COG2186 FadR Transcriptional regulators [Transcription]
Probab=91.14 E-value=0.11 Score=47.09 Aligned_cols=30 Identities=10% Similarity=-0.117 Sum_probs=27.8
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
|++|+||--|+..|+..|| .+.|+||||..
T Consensus 45 gVSR~~vREAl~~L~a~Glve~r~G~Gt~V~~ 76 (241)
T COG2186 45 GVSRTVVREALKRLEAKGLVEIRQGSGTFVRP 76 (241)
T ss_pred CCCcHHHHHHHHHHHHCCCeeecCCCceEecC
Confidence 4569999999999999999 99999999975
No 413
>TIGR02812 fadR_gamma fatty acid metabolism transcriptional regulator FadR. Members of this family are FadR, a transcriptional regulator of fatty acid metabolism, including both biosynthesis and beta-oxidation. It is found exclusively in a subset of Gammaproteobacteria, with strictly one copy per genome. It has an N-terminal DNA-binding domain and a less well conserved C-terminal long chain acyl-CoA-binding domain. FadR from this family heterologously expressed in Escherichia coli show differences in regulatory response and fatty acid binding profiles. The family is nevertheless designated equivalog, as all member proteins have at least nominally the same function.
Probab=90.87 E-value=0.11 Score=47.06 Aligned_cols=30 Identities=13% Similarity=0.147 Sum_probs=27.5
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
|++|+||-.|+..|+.+|+ .++|+|++|+.
T Consensus 41 gVSRtpVREAL~~Le~eGlV~~~~~~G~~V~~ 72 (235)
T TIGR02812 41 GVTRTTLREVLQRLARDGWLTIQHGKPTKVNN 72 (235)
T ss_pred CcCHHHHHHHHHHHHHCCCEEEeCCCccEecC
Confidence 4559999999999999999 89999999975
No 414
>TIGR03338 phnR_burk phosphonate utilization associated transcriptional regulator. This family of proteins are members of the GntR family (pfam00392) containing an N-terminal helix-turn-helix (HTH) motif. This clade is found adjacent to or inside of operons for the degradation of 2-aminoethylphosphonate (AEP) in Polaromonas, Burkholderia, Ralstonia and Verminephrobacter.
Probab=90.61 E-value=0.13 Score=45.64 Aligned_cols=30 Identities=7% Similarity=-0.103 Sum_probs=27.5
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
+++|+||-.|+..|+.+|+ .++|+|++|..
T Consensus 45 gVSRtpVReAL~~L~~eGlv~~~~~~G~~V~~ 76 (212)
T TIGR03338 45 GVSRGPVREAFRALEEAGLVRNEKNRGVFVRE 76 (212)
T ss_pred CCChHHHHHHHHHHHHCCCEEEecCCCeEEec
Confidence 4559999999999999999 89999999975
No 415
>PRK09464 pdhR transcriptional regulator PdhR; Reviewed
Probab=90.46 E-value=0.12 Score=47.40 Aligned_cols=30 Identities=7% Similarity=-0.090 Sum_probs=27.6
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
|++|+||-.|+..|+.+|+ .++|+|+||+.
T Consensus 45 gVSRtpVREAL~~L~~eGlv~~~~~~G~~V~~ 76 (254)
T PRK09464 45 DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQS 76 (254)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCceeEEec
Confidence 4569999999999999999 89999999975
No 416
>PRK11523 DNA-binding transcriptional repressor ExuR; Provisional
Probab=90.31 E-value=0.13 Score=47.26 Aligned_cols=30 Identities=7% Similarity=-0.049 Sum_probs=27.5
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
|++|+||-.|+..|+.+|+ .++|+|+||+.
T Consensus 43 gVSRtpVREAL~~L~~eGlV~~~~~~G~~V~~ 74 (253)
T PRK11523 43 NVSRTVVREAIIMLEVEGYVEVRKGSGIHVVS 74 (253)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCCeeEEec
Confidence 4559999999999999999 99999999975
No 417
>PRK09990 DNA-binding transcriptional regulator GlcC; Provisional
Probab=89.96 E-value=0.14 Score=46.90 Aligned_cols=30 Identities=7% Similarity=-0.022 Sum_probs=27.6
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
+++|+||-.|+..|+.+|+ .++|+|+||+.
T Consensus 42 gVSRtpVREAL~~L~~eGlV~~~~~~G~~V~~ 73 (251)
T PRK09990 42 GFSRSALREGLTVLRGRGIIETAQGRGSFVAR 73 (251)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEeCCCeeEEec
Confidence 4569999999999999999 89999999985
No 418
>PRK10421 DNA-binding transcriptional repressor LldR; Provisional
Probab=89.95 E-value=0.14 Score=46.99 Aligned_cols=30 Identities=7% Similarity=-0.094 Sum_probs=27.6
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
|++|+||-.|+..|+.+|+ .++|+|+||+.
T Consensus 37 gVSRtpVREAL~~Le~~GlV~~~~~~G~~V~~ 68 (253)
T PRK10421 37 GVSRNSLREALAKLVSEGVLLSRRGGGTFIRW 68 (253)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEeCCCeEEEec
Confidence 4569999999999999999 89999999985
No 419
>PRK03837 transcriptional regulator NanR; Provisional
Probab=89.36 E-value=0.17 Score=45.98 Aligned_cols=30 Identities=13% Similarity=-0.011 Sum_probs=27.5
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
+++|+||-.|+..|+.+|+ .++|+|++|..
T Consensus 48 gVSRt~VREAL~~L~~eGlv~~~~~~G~~V~~ 79 (241)
T PRK03837 48 GVGRPAVREALQALKRKGLVQISHGERARVSR 79 (241)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCCceeEec
Confidence 4669999999999999999 89999999975
No 420
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=88.71 E-value=6.3 Score=34.76 Aligned_cols=101 Identities=14% Similarity=0.296 Sum_probs=62.5
Q ss_pred CCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCC
Q 013521 133 IEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTT 212 (441)
Q Consensus 133 ~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~ 212 (441)
.+...|++..|+..|...+..+++.|-.|.+.+|....-.......| ++..+.-.... .++
T Consensus 7 l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-------------~i~~~~~~~~~---~dl--- 67 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQG-------------GITWLARCFDA---DIL--- 67 (205)
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcC-------------CEEEEeCCCCH---HHh---
Confidence 45568999999999998888888888888888887653332222233 44454432221 112
Q ss_pred CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEE-Eccc-ccccc
Q 013521 213 SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIV-YDSA-YAAYI 260 (441)
Q Consensus 213 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii-~De~-~~~~~ 260 (441)
....+|+ ..|++| +--++|...|++.++++- +|+. .++|.
T Consensus 68 ~~~~lVi-~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e~~~f~ 109 (205)
T TIGR01470 68 EGAFLVI-AATDDE-------ELNRRVAHAARARGVPVNVVDDPELCSFI 109 (205)
T ss_pred CCcEEEE-ECCCCH-------HHHHHHHHHHHHcCCEEEECCCcccCeEE
Confidence 3455544 455554 124689999999998873 5553 34444
No 421
>TIGR01610 phage_O_Nterm phage replication protein O, N-terminal domain. This model represents the N-terminal region of the phage lambda replication protein O and homologous regions of other phage proteins.
Probab=87.17 E-value=0.32 Score=37.03 Aligned_cols=28 Identities=7% Similarity=-0.162 Sum_probs=23.1
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEV 40 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v 40 (441)
+..|.||+++++.|+.+|| ...|+|+|-
T Consensus 58 g~sr~tVsr~L~~Le~~GlI~r~~~~~~~~ 87 (95)
T TIGR01610 58 GLSRTHVSDAIKSLARRRIIFRQGMMGIVG 87 (95)
T ss_pred CcCHHHHHHHHHHHHHCCCeeeecCCceee
Confidence 3459999999999999999 556678774
No 422
>PRK11534 DNA-binding transcriptional regulator CsiR; Provisional
Probab=86.40 E-value=0.36 Score=43.27 Aligned_cols=30 Identities=10% Similarity=0.045 Sum_probs=27.2
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
|++|++|-.|+..|+.+|+ .++++|++|+.
T Consensus 41 gVSRtpVREAL~~L~~eGlv~~~~~~G~~V~~ 72 (224)
T PRK11534 41 ALGVGPLREALSQLVAERLVTVVNQKGYRVAS 72 (224)
T ss_pred CCChHHHHHHHHHHHHCCCEEEeCCCceEeCC
Confidence 4559999999999999999 89999999975
No 423
>cd07377 WHTH_GntR Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators. This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is
Probab=84.54 E-value=0.54 Score=32.57 Aligned_cols=27 Identities=19% Similarity=0.037 Sum_probs=22.5
Q ss_pred CcccchhhhHHhhhhCCC--CCccccccc
Q 013521 14 PLKATVPFTMDFFLSSRW--PVPRHCTEV 40 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~--~~~~~g~~v 40 (441)
.+++||.+++..|+++|+ ..++.|.++
T Consensus 37 is~~~v~~~l~~L~~~G~i~~~~~~~~~l 65 (66)
T cd07377 37 VSRTTVREALRELEAEGLVERRPGRGTFV 65 (66)
T ss_pred CCHHHHHHHHHHHHHCCCEEecCCCeEEe
Confidence 449999999999999999 566777665
No 424
>PRK11414 colanic acid/biofilm transcriptional regulator; Provisional
Probab=83.90 E-value=0.65 Score=41.55 Aligned_cols=30 Identities=13% Similarity=-0.015 Sum_probs=26.8
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
|++|++|-.|+..|+.+|+ .++++|++|..
T Consensus 45 gVSRtpVREAL~~L~~eGLV~~~~~~g~~v~~ 76 (221)
T PRK11414 45 GMSITPVREALLRLVSVNALSVAPAQAFTVPE 76 (221)
T ss_pred CCCchhHHHHHHHHHHCCCEEecCCCceeecC
Confidence 4559999999999999999 89999999863
No 425
>PF13730 HTH_36: Helix-turn-helix domain
Probab=82.38 E-value=0.66 Score=31.03 Aligned_cols=17 Identities=12% Similarity=0.003 Sum_probs=15.9
Q ss_pred cccchhhhHHhhhhCCC
Q 013521 15 LKATVPFTMDFFLSSRW 31 (441)
Q Consensus 15 ~~~Tv~~a~~~l~~~g~ 31 (441)
+++||.++..+|++.||
T Consensus 38 s~~Tv~~~i~~L~~~G~ 54 (55)
T PF13730_consen 38 SRRTVQRAIKELEEKGL 54 (55)
T ss_pred CHHHHHHHHHHHHHCcC
Confidence 39999999999999997
No 426
>PF00325 Crp: Bacterial regulatory proteins, crp family; InterPro: IPR001808 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. This family groups together a range of proteins, including anr, crp, clp, cysR, fixK, flp, fnr, fnrN, hlyX and ntcA [, ]. Within this family, the HTH motif is situated towards the C terminus.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2OZ6_A 1CGP_B 2GZW_C 1O3T_B 3ROU_A 2CGP_A 3RDI_A 1I5Z_A 3IYD_H 3FWE_B ....
Probab=78.65 E-value=1.2 Score=26.17 Aligned_cols=16 Identities=13% Similarity=0.059 Sum_probs=15.2
Q ss_pred ccchhhhHHhhhhCCC
Q 013521 16 KATVPFTMDFFLSSRW 31 (441)
Q Consensus 16 ~~Tv~~a~~~l~~~g~ 31 (441)
+-||+|++..|+.+|+
T Consensus 16 ~ETVSR~l~~l~~~gl 31 (32)
T PF00325_consen 16 RETVSRILKKLERQGL 31 (32)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 8999999999999996
No 427
>COG1802 GntR Transcriptional regulators [Transcription]
Probab=78.39 E-value=1.5 Score=39.54 Aligned_cols=30 Identities=10% Similarity=-0.020 Sum_probs=27.2
Q ss_pred CCcccchhhhHHhhhhCCC--CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~ 42 (441)
|++|+.|-.|+..|+.+|+ ..+++|++|+.
T Consensus 50 gvSrtPVReAL~rL~~eGlv~~~p~rG~~V~~ 81 (230)
T COG1802 50 GVSRTPVREALRRLEAEGLVEIEPNRGAFVAP 81 (230)
T ss_pred CCCCccHHHHHHHHHHCCCeEecCCCCCeeCC
Confidence 4559999999999999999 88999999975
No 428
>COG1654 BirA Biotin operon repressor [Transcription]
Probab=76.31 E-value=1.5 Score=31.94 Aligned_cols=32 Identities=9% Similarity=-0.098 Sum_probs=27.8
Q ss_pred CCCCCCCcccchhhhHHhhhhCCC---CCcccccccccc
Q 013521 8 PKCSTTPLKATVPFTMDFFLSSRW---PVPRHCTEVSRN 43 (441)
Q Consensus 8 ~~~~~~~~~~Tv~~a~~~l~~~g~---~~~~~g~~v~~~ 43 (441)
.+|| |.+|-+..+.|+++|+ +.+++|+.+...
T Consensus 29 LgiS----RtaVwK~Iq~Lr~~G~~I~s~~~kGY~L~~~ 63 (79)
T COG1654 29 LGIS----RTAVWKHIQQLREEGVDIESVRGKGYLLPQL 63 (79)
T ss_pred HCcc----HHHHHHHHHHHHHhCCceEecCCCceeccCc
Confidence 4677 9999999999999999 888889987643
No 429
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=73.95 E-value=66 Score=28.76 Aligned_cols=100 Identities=10% Similarity=0.107 Sum_probs=63.6
Q ss_pred CCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCC
Q 013521 134 EGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTS 213 (441)
Q Consensus 134 ~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~ 213 (441)
+...|++..|+.-|..-+..|++-|-.|.+-+|....-.......| ++.++....+.. ++ .
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~-------------~i~~~~r~~~~~---dl---~ 84 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYG-------------NLKLIKGNYDKE---FI---K 84 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCC-------------CEEEEeCCCChH---Hh---C
Confidence 3458999999999988888888889899998998854333333333 445544322211 12 3
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEE-Eccc-ccccc
Q 013521 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIV-YDSA-YAAYI 260 (441)
Q Consensus 214 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii-~De~-~~~~~ 260 (441)
+..+|+.+.. +.+-=++|.+.|+++++++. +|+. .++|.
T Consensus 85 g~~LViaATd--------D~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi 125 (223)
T PRK05562 85 DKHLIVIATD--------DEKLNNKIRKHCDRLYKLYIDCSDYKKGLCI 125 (223)
T ss_pred CCcEEEECCC--------CHHHHHHHHHHHHHcCCeEEEcCCcccCeEE
Confidence 5667666532 34556789999999876544 5653 34443
No 430
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=73.66 E-value=47 Score=29.40 Aligned_cols=97 Identities=14% Similarity=0.328 Sum_probs=60.7
Q ss_pred CCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC
Q 013521 132 GIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST 211 (441)
Q Consensus 132 ~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~ 211 (441)
.++...|++..|+..|..-+..+++.|..|.+-.|....-......-+ .+..+. +.+..+..
T Consensus 9 ~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~-------------~i~~~~----~~~~~~~~- 70 (210)
T COG1648 9 DLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEG-------------KIKWIE----REFDAEDL- 70 (210)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhc-------------Ccchhh----cccChhhh-
Confidence 345668999999999999898999999999999999832222222222 222222 22222222
Q ss_pred CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEE-Eccc
Q 013521 212 TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIV-YDSA 255 (441)
Q Consensus 212 ~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii-~De~ 255 (441)
.+..+++++.. | .+.=++|.+.|+++++++- +|+.
T Consensus 71 -~~~~lviaAt~-d-------~~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 71 -DDAFLVIAATD-D-------EELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred -cCceEEEEeCC-C-------HHHHHHHHHHHHHhCCceeccCCc
Confidence 23556555443 2 2446899999999987654 5554
No 431
>smart00529 HTH_DTXR Helix-turn-helix diphteria tox regulatory element. iron dependent repressor
Probab=72.67 E-value=2.3 Score=32.15 Aligned_cols=28 Identities=11% Similarity=-0.013 Sum_probs=21.9
Q ss_pred CcccchhhhHHhhhhCCC--CCcccccccc
Q 013521 14 PLKATVPFTMDFFLSSRW--PVPRHCTEVS 41 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~ 41 (441)
..++||+++++.|+++|| .+++.+++++
T Consensus 11 is~stvs~~l~~L~~~glI~r~~~~~~~lT 40 (96)
T smart00529 11 VSPPTVTQMLKKLEKDGLVEYEPYRGITLT 40 (96)
T ss_pred CChHHHHHHHHHHHHCCCEEEcCCCceEec
Confidence 449999999999999999 4444566554
No 432
>PF08279 HTH_11: HTH domain; InterPro: IPR013196 Winged helix DNA-binding proteins share a related winged helix-turn-helix DNA-binding motif, where the "wings", or loops, are small beta-sheets. The winged helix motif consists of two wings (W1, W2), three alpha helices (H1, H2, H3) and three beta-sheets (S1, S2, S3) arranged in the order H1-S1-H2-H3-S2-W1-S3-W2 []. The DNA-recognition helix makes sequence-specific DNA contacts with the major groove of DNA, while the wings make different DNA contacts, often with the minor groove or the backbone of DNA. Several winged-helix proteins display an exposed patch of hydrophobic residues thought to mediate protein-protein interactions. This entry represents a subset of the winged helix domain superfamily which is predominantly found in bacterial proteins, though there are also some archaeal and eukaryotic examples. This domain is commonly found in the biotin (vitamin H) repressor protein BirA which regulates transcription of the biotin operon []. It is also found in other proteins including regulators of amino acid biosynthsis such as LysM [], and regulators of carbohydrate metabolisms such as LicR and FrvR [, ].; PDB: 1HXD_B 2EWN_B 1BIA_A 1BIB_A 1J5Y_A 3V7S_A 3V7C_A 3RKW_A 3RIR_A 3RKX_A ....
Probab=68.88 E-value=2.2 Score=28.44 Aligned_cols=26 Identities=4% Similarity=-0.169 Sum_probs=20.9
Q ss_pred CcccchhhhHHhhhhCCC---CCcccccc
Q 013521 14 PLKATVPFTMDFFLSSRW---PVPRHCTE 39 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~---~~~~~g~~ 39 (441)
+++.||.+-++.|++.|+ +++|+|++
T Consensus 27 vS~rTi~~~i~~L~~~~~~I~~~~~~GY~ 55 (55)
T PF08279_consen 27 VSRRTIRRDIKELREWGIPIESKRGKGYR 55 (55)
T ss_dssp S-HHHHHHHHHHHHHTT-EEEEETTTEE-
T ss_pred CCHHHHHHHHHHHHHCCCeEEeeCCCCcC
Confidence 349999999999999997 88888874
No 433
>TIGR00122 birA_repr_reg BirA biotin operon repressor domain. This model may recognize some other putative repressor proteins, such as DnrO of Streptomyces peucetius with scores below the noise cutoff but with significance shown by low E-value.
Probab=68.80 E-value=3.1 Score=29.30 Aligned_cols=31 Identities=3% Similarity=-0.170 Sum_probs=24.8
Q ss_pred CCcccchhhhHHhhhhCCC--CCcccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVSRN 43 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~~~ 43 (441)
+.++.||.+....|+++|+ ...+.|+++...
T Consensus 24 ~vS~~tv~~~l~~L~~~g~~i~~~~~g~~l~~~ 56 (69)
T TIGR00122 24 GMSRTAVNKHIQTLREWGVDVLTVGKGYRLPPP 56 (69)
T ss_pred CCCHHHHHHHHHHHHHCCCeEEecCCceEecCc
Confidence 3449999999999999999 334888887643
No 434
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=65.38 E-value=62 Score=30.44 Aligned_cols=149 Identities=12% Similarity=0.101 Sum_probs=82.4
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCC
Q 013521 87 PDIITSAMAEHAFALSTVKGYKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDP 166 (441)
Q Consensus 87 ~~~~~~al~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p 166 (441)
-.+..+-+++++.+.+..+--..|....|.......+++-+ .-+..+++++-++..|-.++.+.-+ -.|++..-
T Consensus 44 Ld~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql----~~~~~dviv~i~tp~Aq~~~s~~~~--iPVV~aav 117 (322)
T COG2984 44 LDAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQL----VGDKPDVIVAIATPAAQALVSATKT--IPVVFAAV 117 (322)
T ss_pred HHHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHh----hcCCCcEEEecCCHHHHHHHHhcCC--CCEEEEcc
Confidence 34556666677776543222335666778888888888776 4455588888888877766655543 23444332
Q ss_pred CchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC----CCCCccEE-EEcCCCCccccCCCHHHHHHHHH
Q 013521 167 SFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS----TTSRTDII-FFCSPNNPTGHAATWQQLKKLVE 241 (441)
Q Consensus 167 ~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~----~~~~~~~v-~i~~p~NPtG~~~~~~~~~~i~~ 241 (441)
+-+--......+...| .++..+.- .......++ ..++.+-| ++++|+-+- |...++++.+
T Consensus 118 td~v~a~Lv~~~~~pg---------~NvTGvsD--~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~n----s~~l~eelk~ 182 (322)
T COG2984 118 TDPVGAKLVKSLEQPG---------GNVTGVSD--LLPVAQQIELIKALLPNAKSIGVLYNPGEAN----SVSLVEELKK 182 (322)
T ss_pred CchhhccCCccccCCC---------CceeecCC--cchHHHHHHHHHHhCCCCeeEEEEeCCCCcc----cHHHHHHHHH
Confidence 2111111111111100 13433321 000000011 14677666 677885543 6778999999
Q ss_pred HHHHcCcEEEEcccc
Q 013521 242 FAKANGSIIVYDSAY 256 (441)
Q Consensus 242 ~a~~~~~~ii~De~~ 256 (441)
.|++.|+-+++=-+-
T Consensus 183 ~A~~~Gl~vve~~v~ 197 (322)
T COG2984 183 EARKAGLEVVEAAVT 197 (322)
T ss_pred HHHHCCCEEEEEecC
Confidence 999999999976553
No 435
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=65.21 E-value=38 Score=25.90 Aligned_cols=86 Identities=21% Similarity=0.417 Sum_probs=54.0
Q ss_pred CCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC
Q 013521 132 GIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST 211 (441)
Q Consensus 132 ~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~ 211 (441)
+++...|++..|+..|..-+..+++.|-.|.+-+|.. .... + .+..... .+..+
T Consensus 4 ~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~----~~~~--~-------------~i~~~~~----~~~~~--- 57 (103)
T PF13241_consen 4 DLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI----EFSE--G-------------LIQLIRR----EFEED--- 57 (103)
T ss_dssp --TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE----HHHH--T-------------SCEEEES----S-GGG---
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch----hhhh--h-------------HHHHHhh----hHHHH---
Confidence 4566789999999999988999999998888888876 1111 2 2222222 22212
Q ss_pred CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEE
Q 013521 212 TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIV 251 (441)
Q Consensus 212 ~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii 251 (441)
..+..+|++ .+++| +.-++|.+.|+++++++-
T Consensus 58 l~~~~lV~~-at~d~-------~~n~~i~~~a~~~~i~vn 89 (103)
T PF13241_consen 58 LDGADLVFA-ATDDP-------ELNEAIYADARARGILVN 89 (103)
T ss_dssp CTTESEEEE--SS-H-------HHHHHHHHHHHHTTSEEE
T ss_pred HhhheEEEe-cCCCH-------HHHHHHHHHHhhCCEEEE
Confidence 245666665 33443 346789999999998775
No 436
>cd00092 HTH_CRP helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family.
Probab=65.04 E-value=3.5 Score=28.54 Aligned_cols=27 Identities=11% Similarity=-0.090 Sum_probs=21.1
Q ss_pred CcccchhhhHHhhhhCCC-CCccccccc
Q 013521 14 PLKATVPFTMDFFLSSRW-PVPRHCTEV 40 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~-~~~~~g~~v 40 (441)
..+.||++++..|+++|+ .+.+.|.|.
T Consensus 37 ~s~~tv~r~l~~L~~~g~i~~~~~~~~~ 64 (67)
T cd00092 37 LTRETVSRTLKELEEEGLISRRGRGKYR 64 (67)
T ss_pred CCHHHHHHHHHHHHHCCCEEecCCCeEE
Confidence 448999999999999999 444456553
No 437
>PRK11014 transcriptional repressor NsrR; Provisional
Probab=64.67 E-value=3.1 Score=34.25 Aligned_cols=27 Identities=4% Similarity=-0.026 Sum_probs=22.9
Q ss_pred CCcccchhhhHHhhhhCCC--CCcccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTE 39 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~ 39 (441)
+.++++|.+++..|+.+|+ +++|+|..
T Consensus 36 ~is~~~vrk~l~~L~~~Glv~s~~G~~GG 64 (141)
T PRK11014 36 GVSRNHMVKIINQLSRAGYVTAVRGKNGG 64 (141)
T ss_pred CcCHHHHHHHHHHHHhCCEEEEecCCCCC
Confidence 4569999999999999999 88888443
No 438
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=62.10 E-value=12 Score=38.86 Aligned_cols=44 Identities=23% Similarity=0.251 Sum_probs=36.1
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccCC
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITDP 263 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~~ 263 (441)
.+.+-.|++.-| ++++++++++-|+++|+-||.|=+|..|..++
T Consensus 200 ~~g~yAp~sryG---tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 200 GTGYYAPTSRYG---TPEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred cceeccccccCC---CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 344446777666 77999999999999999999999999876654
No 439
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=61.29 E-value=1.1e+02 Score=26.72 Aligned_cols=39 Identities=18% Similarity=0.297 Sum_probs=30.6
Q ss_pred CCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchh
Q 013521 132 GIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPA 170 (441)
Q Consensus 132 ~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~ 170 (441)
.++...|++..|+.-|...+..+++.|-.|.+.+|.+..
T Consensus 7 ~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~ 45 (202)
T PRK06718 7 DLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTE 45 (202)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCH
Confidence 345668899999988888888888888788887888744
No 440
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=59.94 E-value=27 Score=33.34 Aligned_cols=59 Identities=12% Similarity=0.132 Sum_probs=38.1
Q ss_pred ceeEEeecCCCCCccCCCCCCCCc---cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 192 RNIVYMNCRPENNFFPDLSTTSRT---DIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~~~---~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
.++..+.+.++.+|...+..-++. .+ . +....+.|-.++.+++++|++.|+++|+-||-
T Consensus 32 lN~lhlHLtD~~~~rle~~~~P~lt~~ga-~-~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 32 LNVLHLHLTDDQGWRIEIKSWPKLTEIGG-S-TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred CcEEEEEeecCCcceeeecCccccccccc-c-cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 366666666666665544331111 11 1 11234567789999999999999999998883
No 441
>PRK10637 cysG siroheme synthase; Provisional
Probab=59.09 E-value=1.2e+02 Score=30.41 Aligned_cols=121 Identities=14% Similarity=0.185 Sum_probs=72.9
Q ss_pred CCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC
Q 013521 132 GIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST 211 (441)
Q Consensus 132 ~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~ 211 (441)
.++...|++..|+.-|..-+..|++.|-.|.+-.|.+..-.......| ++..+.-....+ ++
T Consensus 9 ~l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~-------------~i~~~~~~~~~~---dl-- 70 (457)
T PRK10637 9 QLRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAG-------------MLTLVEGPFDES---LL-- 70 (457)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCC-------------CEEEEeCCCChH---Hh--
Confidence 456679999999999988888888888888888888754333333333 445544322211 12
Q ss_pred CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEE-Eccc-ccccccCCCCCcccccCCCcceeEEEecCCc
Q 013521 212 TSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIV-YDSA-YAAYITDPSPRSIYEIPGAREVAIEISSFSK 286 (441)
Q Consensus 212 ~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii-~De~-~~~~~~~~~~~~~~~~~~~~~~~i~i~S~SK 286 (441)
.+..+|+.+. +|+ +-=++|.+.|++.++++- +|+. .++|.+ +++..- .+.+|-|+|-.|
T Consensus 71 -~~~~lv~~at-~d~-------~~n~~i~~~a~~~~~lvN~~d~~~~~~f~~----pa~~~~---g~l~iaisT~G~ 131 (457)
T PRK10637 71 -DTCWLAIAAT-DDD-------AVNQRVSEAAEARRIFCNVVDAPKAASFIM----PSIIDR---SPLMVAVSSGGT 131 (457)
T ss_pred -CCCEEEEECC-CCH-------HHhHHHHHHHHHcCcEEEECCCcccCeEEE----eeEEec---CCEEEEEECCCC
Confidence 3456655543 332 345789999999887764 6653 344443 223222 345566665544
No 442
>smart00419 HTH_CRP helix_turn_helix, cAMP Regulatory protein.
Probab=58.12 E-value=5.1 Score=25.48 Aligned_cols=17 Identities=18% Similarity=0.098 Sum_probs=16.1
Q ss_pred cccchhhhHHhhhhCCC
Q 013521 15 LKATVPFTMDFFLSSRW 31 (441)
Q Consensus 15 ~~~Tv~~a~~~l~~~g~ 31 (441)
.+.||.+++..|+++|+
T Consensus 21 s~~tv~~~l~~L~~~g~ 37 (48)
T smart00419 21 TRETVSRTLKRLEKEGL 37 (48)
T ss_pred CHHHHHHHHHHHHHCCC
Confidence 48999999999999999
No 443
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=55.23 E-value=25 Score=33.09 Aligned_cols=59 Identities=19% Similarity=0.193 Sum_probs=36.7
Q ss_pred ceeEEeecCCCCCccCCCCCCCCcc--EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 192 RNIVYMNCRPENNFFPDLSTTSRTD--IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~~~~--~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
.++..+.+.++.+|..+....+... .-. .++ .+.|-.++++++++|++.|+++|+-||-
T Consensus 30 ~N~lhlHl~D~~~~~le~~~~p~l~~~g~~-~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 30 INTFHWHLTDDQAWRIESKKFPELAEKGGQ-INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred CcEEEEeeecCCCceEeeCccchhhhhccc-ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 3666666666666655433211110 000 111 2445689999999999999999998883
No 444
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=53.79 E-value=31 Score=33.34 Aligned_cols=27 Identities=22% Similarity=0.460 Sum_probs=24.1
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
|.|-.++++++++|++.|+++|+-||-
T Consensus 78 ~~~~~YT~~di~eiv~yA~~rgI~VIP 104 (357)
T cd06563 78 PYGGFYTQEEIREIVAYAAERGITVIP 104 (357)
T ss_pred ccCceECHHHHHHHHHHHHHcCCEEEE
Confidence 457789999999999999999998883
No 445
>PRK04148 hypothetical protein; Provisional
Probab=51.42 E-value=1.3e+02 Score=24.43 Aligned_cols=88 Identities=19% Similarity=0.240 Sum_probs=48.8
Q ss_pred cEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCcc
Q 013521 137 EIFISDGAQSDISRLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTD 216 (441)
Q Consensus 137 ~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~ 216 (441)
-+.++.|.-..+.. .+.+.|-.|+..+-.-.. ...++..+ .+++. ++-|.++++--.+.+
T Consensus 20 ileIG~GfG~~vA~--~L~~~G~~ViaIDi~~~a-V~~a~~~~------------~~~v~-----dDlf~p~~~~y~~a~ 79 (134)
T PRK04148 20 IVELGIGFYFKVAK--KLKESGFDVIVIDINEKA-VEKAKKLG------------LNAFV-----DDLFNPNLEIYKNAK 79 (134)
T ss_pred EEEEEecCCHHHHH--HHHHCCCEEEEEECCHHH-HHHHHHhC------------CeEEE-----CcCCCCCHHHHhcCC
Confidence 34477773222332 222556667665544332 33333333 23333 234445555446788
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
+||=+.| |.|-...|+++|++.|.-++.
T Consensus 80 liysirp--------p~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 80 LIYSIRP--------PRDLQPFILELAKKINVPLII 107 (134)
T ss_pred EEEEeCC--------CHHHHHHHHHHHHHcCCCEEE
Confidence 9887665 456677899999999875543
No 446
>PF05732 RepL: Firmicute plasmid replication protein (RepL); InterPro: IPR008813 This entry consists of proteins thought to be involved in plasmid replication. ; GO: 0006260 DNA replication, 0006276 plasmid maintenance
Probab=48.96 E-value=7.9 Score=32.80 Aligned_cols=28 Identities=14% Similarity=-0.041 Sum_probs=23.6
Q ss_pred CcccchhhhHHhhhhCCC-CCcccccccc
Q 013521 14 PLKATVPFTMDFFLSSRW-PVPRHCTEVS 41 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~-~~~~~g~~v~ 41 (441)
.++.||++++.+|++.++ .+.+.|+|.-
T Consensus 87 iS~~Tv~r~ik~L~e~~iI~k~~~G~Y~i 115 (165)
T PF05732_consen 87 ISKPTVSRAIKELEEKNIIKKIRNGAYMI 115 (165)
T ss_pred CCHHHHHHHHHHHHhCCcEEEccCCeEEE
Confidence 349999999999999999 7777787653
No 447
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=46.77 E-value=13 Score=35.74 Aligned_cols=59 Identities=17% Similarity=0.255 Sum_probs=34.3
Q ss_pred ceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEE
Q 013521 192 RNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIV 251 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii 251 (441)
.++..+.+.++.+|...+...+...-.--..++.+ |-.++++++++|++.|+++|+-||
T Consensus 32 ~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~~~~~~-~~~yT~~di~~lv~yA~~~gI~VI 90 (351)
T PF00728_consen 32 LNVLHLHLSDDQGFRLESKSYPELTEKGAYRPSDA-GGYYTKEDIRELVAYAKERGIEVI 90 (351)
T ss_dssp -SEEEEEEESSTCB-BEBSTSTHHHHTTTESTTCT-ESEBEHHHHHHHHHHHHHTT-EEE
T ss_pred CcEEEEEEecCCCCccccCCCccccccCccccccc-cccCCHHHHHHHHHHHHHcCCcee
Confidence 36666677666666555433211110000011113 449999999999999999999888
No 448
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=46.22 E-value=61 Score=30.67 Aligned_cols=54 Identities=17% Similarity=0.239 Sum_probs=35.7
Q ss_pred ceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEE
Q 013521 192 RNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIV 251 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii 251 (441)
.++..+.+.++.+|..+....+ .+.- .. ..|-.++++++++|++.|+++|+-||
T Consensus 32 lN~lh~HltDd~~~rle~~~~P--~lt~---~g-~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 32 LNVFHWHLTDDQGFRIESKKYP--KLQQ---KA-SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred CeEEEEEEecCCCceeecCCCc--cccc---cC-CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 3666677666666655443322 2111 11 13567999999999999999999888
No 449
>PF01325 Fe_dep_repress: Iron dependent repressor, N-terminal DNA binding domain; InterPro: IPR022687 The DtxR-type HTH domain is a DNA-binding, winged helix-turn-helix (wHTH) domain of about 65 residues present in metalloregulators of the DtxR/MntR family. The family is named after Corynebacterium diphtheriae DtxR, an iron-specific diphtheria toxin repressor, and Bacillus subtilis MntR, a manganese transport regulator. Iron-responsive metalloregulators such as DtxR and IdeR occur in Gram-positive bacteria of the high GC branch, while manganese-responsive metalloregulators like MntR are described in diverse genera of Gram-positive and Gram-negative bacteria and also in Archaea [].The metalloregulators like DtxR/MntR contain the DNA-binding DtxR-type HTH domain usually in the N-terminal part. The C-terminal part contains a dimerisation domain with two metal-binding sites, although the primary metal-binding site is less conserved in the Mn(II)-regulators. Fe(II)-regulated proteins contain an SH3-like domain as a C-terminal extension, which is absent in Mn(II)-regulated MntR [, ]. Metal-ion dependent regulators orchestrate the virulence of several important human pathogens. The DtxR protein regulates the expression of diphtheria toxinin response to environmental iron concentrations. Furthermore, DtxR and IdeR control iron uptake []. Homeostasis of manganese, which is an essential nutrient, is regulated by MntR. A typical DtxR-type metalloregulator binds two divalent metal effectors per monomer, upon which allosteric changes occur that moderate binding to the cognate DNA operators. Iron-bound DtxR homodimers bind to an interrupted palindrome of 19 bp, protecting a sequence of ~30 bp. The crystal structures of iron-regulated and manganese-regulated repressors show that the DNA binding domain contains three alpha-helices and a pair of antiparallel beta-strands. Helices 2 and 3 comprise the helix-turn-helix motif and the beta-strands are called the wing []. This wHTH topology is similar to the lysR-type HTH (see PDOC00043 from PROSITEDOC). Most DtxR-type metalloregulators bind as dimers to the DNA major groove. Several proteins are known to contain a DtxR-type HTH domain. These include- Corynebacterium diphtheriae DtxR, a diphtheria toxin repressor [], which regulates the expression of the high-affinity iron uptake system, other iron-sensitive genes, and the bacteriophage tox gene. Metal-bound DtxR represses transcription by binding the tox operator; if iron is limiting, conformational changes of the wHTH disrupt DNA-binding and the diphtheria toxin is produced. Mycobacterium tuberculosis IdeR, an iron-dependent regulator that is essential for this pathogen. The regulator represses genes for iron acquisition and activates iron storage genes, and is a positive regulator of oxidative stress responses []. Bacillus subtilis MntR, a manganese transport regulator, binds Mn2+ as an effector and is a transcriptional repressor of transporters for the import of manganese. Treponema pallidum troR, a metal-dependent transcriptional repressor. Archaeoglobus fulgidus MDR1 (troR), a metal-dependent transcriptional repressor, which negatively regulates its own transcription. This entry covers the entire DtxR-type HTH domain.; GO: 0005506 iron ion binding; PDB: 3HRT_B 3HRS_A 3HRU_B 2X4H_D 1ON1_B 2HYF_C 2F5E_A 3R60_B 1ON2_B 2F5F_A ....
Probab=46.03 E-value=9.9 Score=26.00 Aligned_cols=19 Identities=11% Similarity=-0.073 Sum_probs=16.7
Q ss_pred CCcccchhhhHHhhhhCCC
Q 013521 13 TPLKATVPFTMDFFLSSRW 31 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~ 31 (441)
+++++||+.+...|+++||
T Consensus 33 ~vs~~tvt~ml~~L~~~Gl 51 (60)
T PF01325_consen 33 GVSPPTVTEMLKRLAEKGL 51 (60)
T ss_dssp TS-HHHHHHHHHHHHHTTS
T ss_pred CCChHHHHHHHHHHHHCCC
Confidence 4569999999999999999
No 450
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=45.80 E-value=46 Score=32.08 Aligned_cols=56 Identities=14% Similarity=0.224 Sum_probs=37.3
Q ss_pred ceeEEeecCCCCCccCCCCCCCCccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 192 RNIVYMNCRPENNFFPDLSTTSRTDIIFFCSP-NNPTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p-~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
.++..+.+.++.+|..++...+. + +.. ....|-.++++++++|++.|+++||-||-
T Consensus 32 lN~lh~HltDd~~~rle~~~~P~--L---t~~ga~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 32 LNVLHWHITDSQSFPLESPSYPE--L---SKKGAYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred CcEEEEeEEcCCCceEeeCCCch--h---hhccCcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 36666776666666555433221 1 111 12356789999999999999999998883
No 451
>smart00642 Aamy Alpha-amylase domain.
Probab=45.30 E-value=26 Score=29.72 Aligned_cols=27 Identities=30% Similarity=0.432 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccc
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAA 258 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~ 258 (441)
+.++++++++-|+++|+.||.|-+...
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 468999999999999999999988763
No 452
>PF13545 HTH_Crp_2: Crp-like helix-turn-helix domain; PDB: 3LA2_A 3LA3_B 3LA7_A 3B02_A 3E97_A 2H6C_B 1OMI_A 2BGC_H 2BEO_A 2GAU_A ....
Probab=42.79 E-value=11 Score=26.81 Aligned_cols=19 Identities=11% Similarity=-0.031 Sum_probs=17.1
Q ss_pred CCcccchhhhHHhhhhCCC
Q 013521 13 TPLKATVPFTMDFFLSSRW 31 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~ 31 (441)
|.+|.||++.+..|+++|+
T Consensus 39 g~sr~tv~r~l~~l~~~g~ 57 (76)
T PF13545_consen 39 GVSRETVSRILKRLKDEGI 57 (76)
T ss_dssp TSCHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHCCC
Confidence 3449999999999999999
No 453
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=42.27 E-value=22 Score=34.03 Aligned_cols=41 Identities=20% Similarity=0.272 Sum_probs=29.6
Q ss_pred CCccEEEEcCC-CCccccCCCHH--------------HHHHHHHHHHHcCcEEEEcc
Q 013521 213 SRTDIIFFCSP-NNPTGHAATWQ--------------QLKKLVEFAKANGSIIVYDS 254 (441)
Q Consensus 213 ~~~~~v~i~~p-~NPtG~~~~~~--------------~~~~i~~~a~~~~~~ii~De 254 (441)
++.++ +++|| |.--+.-|.++ .--+|.++|++||+.|++|=
T Consensus 261 p~Adv-VItNPTH~AVAlkY~~~~~~AP~VvAKG~d~~AlkIreiA~e~~Ipi~enp 316 (363)
T COG1377 261 PKADV-VITNPTHYAVALKYDPEKMPAPVVVAKGVDLVALKIREIAKEHGIPIIENP 316 (363)
T ss_pred CCCCE-EeeCcCceeeeeeeccccCCCCEEEEeCCcHHHHHHHHHHHHcCCceecCh
Confidence 56665 55677 66555555544 34688999999999999994
No 454
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=41.89 E-value=18 Score=33.72 Aligned_cols=27 Identities=26% Similarity=0.436 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHH-HcCcEEEEcccccc
Q 013521 232 TWQQLKKLVEFAK-ANGSIIVYDSAYAA 258 (441)
Q Consensus 232 ~~~~~~~i~~~a~-~~~~~ii~De~~~~ 258 (441)
...++++|++||. .++.+||.||+|.-
T Consensus 157 ~~sRl~ql~~W~g~dfdgvivfDEcH~a 184 (303)
T PF13872_consen 157 YRSRLDQLVDWCGEDFDGVIVFDECHKA 184 (303)
T ss_pred ccchHHHHHHHHhcCCCceEEeccchhc
Confidence 3467999999995 47889999999974
No 455
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=39.97 E-value=98 Score=28.84 Aligned_cols=141 Identities=21% Similarity=0.250 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHhhccCCCC--CCCCCCCcCcHHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEe-
Q 013521 88 DIITSAMAEHAFALSTVKG--YKGYGAEQGNMALRTAIADKFYKDMGIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQ- 164 (441)
Q Consensus 88 ~~~~~al~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~- 164 (441)
....+.+.+.+.+.+.... ...|....|..+....+++.+ ....-+++++.|+..+..+...+.+. -.|+..
T Consensus 14 ~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l----~~~~~DlIi~~gt~aa~~~~~~~~~~-iPVVf~~ 88 (294)
T PF04392_consen 14 DDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKL----KAQKPDLIIAIGTPAAQALAKHLKDD-IPVVFCG 88 (294)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHH----CCTS-SEEEEESHHHHHHHHHH-SS--S-EEEEC
T ss_pred HHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHH----hcCCCCEEEEeCcHHHHHHHHhcCCC-cEEEEEe
Confidence 4566777777776543220 112334456666655666555 23345799999998887766555432 334433
Q ss_pred --CCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCC--C--CCCccEE-EEcCCCCccccCCCHHHHH
Q 013521 165 --DPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLS--T--TSRTDII-FFCSPNNPTGHAATWQQLK 237 (441)
Q Consensus 165 --~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~--~--~~~~~~v-~i~~p~NPtG~~~~~~~~~ 237 (441)
+|...++.......| -++..+.-.. .+...++ . .++.+-| ++.+|+.++ +....+
T Consensus 89 V~dp~~~~l~~~~~~~~------------~nvTGv~~~~--~~~~~l~l~~~l~P~~k~igvl~~~~~~~----~~~~~~ 150 (294)
T PF04392_consen 89 VSDPVGAGLVDSLDRPG------------KNVTGVSERP--PIEKQLELIKKLFPDAKRIGVLYDPSEPN----SVAQIE 150 (294)
T ss_dssp ES-TTTTTS-S-SSS--------------SSEEEEEE-----HHHHHHHHHHHSTT--EEEEEEETT-HH----HHHHHH
T ss_pred ccChhhhhccccccCCC------------CCEEEEECCc--CHHHHHHHHHHhCCCCCEEEEEecCCCcc----HHHHHH
Confidence 343333322221111 1344443111 1111111 1 3544444 455777654 345677
Q ss_pred HHHHHHHHcCcEEE
Q 013521 238 KLVEFAKANGSIIV 251 (441)
Q Consensus 238 ~i~~~a~~~~~~ii 251 (441)
.+.+.++++|+-++
T Consensus 151 ~~~~~a~~~g~~l~ 164 (294)
T PF04392_consen 151 QLRKAAKKLGIELV 164 (294)
T ss_dssp HHHHHHHHTT-EEE
T ss_pred HHHHHHHHcCCEEE
Confidence 88888889998665
No 456
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=39.64 E-value=90 Score=28.49 Aligned_cols=101 Identities=10% Similarity=0.012 Sum_probs=54.1
Q ss_pred CcEEEcCCcHHHHHHHHHhcCCCCEEEEeC--CCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCC
Q 013521 136 DEIFISDGAQSDISRLQMLLGSNVTVAVQD--PSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTS 213 (441)
Q Consensus 136 ~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~--p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~ 213 (441)
+++++|-|.+..+..+..-.+++..|++.+ |.+.+. ..++.+...| +++..++-..- ... .+
T Consensus 87 ~dvILT~s~S~~v~~~l~~~~~~~~V~v~ESrP~~eG~-~~a~~L~~~G---------I~vtli~Dsa~-~~~-----m~ 150 (253)
T PRK06372 87 DSVIGTISSSQVLKAFISSSEKIKSVYILESRPMLEGI-DMAKLLVKSG---------IDVVLLTDASM-CEA-----VL 150 (253)
T ss_pred CCEEEEeCCcHHHHHHHHhcCCCCEEEEecCCCchHHH-HHHHHHHHCC---------CCEEEEehhHH-HHH-----HH
Confidence 479999998888776433344545666644 666664 3444433222 35555542111 110 13
Q ss_pred CccEEEEc-CCCCccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 214 RTDIIFFC-SPNNPTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 214 ~~~~v~i~-~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
+++.+++- .--...|.+++.-=-..++-.|+++++.+++
T Consensus 151 ~vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 151 NVDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 45555542 2122334444433344677778999998886
No 457
>PRK11886 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; Provisional
Probab=39.42 E-value=16 Score=34.77 Aligned_cols=30 Identities=7% Similarity=-0.079 Sum_probs=25.1
Q ss_pred CCcccchhhhHHhhhhCCC---CCccccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW---PVPRHCTEVSR 42 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~---~~~~~g~~v~~ 42 (441)
+.+|+||.+++..|+++|+ +..|+||++..
T Consensus 29 gvsr~tV~~~l~~L~~~G~~i~~~~~~Gy~L~~ 61 (319)
T PRK11886 29 GISRAAIWKHIQTLEEWGLDIFSVKGKGYRLAE 61 (319)
T ss_pred CCCHHHHHHHHHHHHHCCCceEEecCCeEEecC
Confidence 4559999999999999999 56778888754
No 458
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=37.92 E-value=22 Score=34.28 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=28.0
Q ss_pred CCccEEEEcCC-CCccccCCCH--------------HHHHHHHHHHHHcCcEEEEcc
Q 013521 213 SRTDIIFFCSP-NNPTGHAATW--------------QQLKKLVEFAKANGSIIVYDS 254 (441)
Q Consensus 213 ~~~~~v~i~~p-~NPtG~~~~~--------------~~~~~i~~~a~~~~~~ii~De 254 (441)
++.++ +++|| |.--+.-|++ .--.+|.++|++||+.||+|-
T Consensus 263 ~~AdV-VItNPTH~AVAL~Yd~~~~~aP~VvAKG~d~~A~~Ir~~A~e~~VPiven~ 318 (358)
T PRK13109 263 PRATL-VIANPTHFAIALRYERSENPAPLVVAKGQDLIALKIREIAEENGIPVIEDK 318 (358)
T ss_pred CCCcE-EEECCCceEEEeEeCCCCCCCCEEEEEeCcHHHHHHHHHHHHcCCCEEeCH
Confidence 45555 45577 5444444432 345789999999999999995
No 459
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=37.91 E-value=30 Score=25.42 Aligned_cols=22 Identities=32% Similarity=0.477 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCcEEEEccccc
Q 013521 236 LKKLVEFAKANGSIIVYDSAYA 257 (441)
Q Consensus 236 ~~~i~~~a~~~~~~ii~De~~~ 257 (441)
-++|.+.|+++|+.+++|..-.
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 6789999999999999997544
No 460
>PLN03244 alpha-amylase; Provisional
Probab=37.72 E-value=52 Score=35.16 Aligned_cols=40 Identities=20% Similarity=0.171 Sum_probs=31.7
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEcccccccccC
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAYITD 262 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~~~~ 262 (441)
.--|+-..-++++++++++.|+++|+-||.|=+|..+..+
T Consensus 430 fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 430 FFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred ccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 3334444557899999999999999999999999866543
No 461
>PRK04296 thymidine kinase; Provisional
Probab=37.15 E-value=54 Score=28.36 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=30.4
Q ss_pred CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccc
Q 013521 213 SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAY 259 (441)
Q Consensus 213 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~ 259 (441)
.++++|++..-| .++.+++.++++.++..|+.+|.=.-..+|
T Consensus 77 ~~~dvviIDEaq-----~l~~~~v~~l~~~l~~~g~~vi~tgl~~~~ 118 (190)
T PRK04296 77 EKIDCVLIDEAQ-----FLDKEQVVQLAEVLDDLGIPVICYGLDTDF 118 (190)
T ss_pred CCCCEEEEEccc-----cCCHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 367788887664 467777888999988899888865554443
No 462
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=36.68 E-value=29 Score=32.89 Aligned_cols=75 Identities=13% Similarity=0.292 Sum_probs=44.3
Q ss_pred CchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHc
Q 013521 167 SFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKAN 246 (441)
Q Consensus 167 ~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~ 246 (441)
.|++|.+.++... .++++++.........-.....+-|.|++ .-|+ .++.++.++|++.|+++
T Consensus 60 ~y~syEeLakd~~------------vDvVyi~~~~~qH~evv~l~l~~~K~VL~---EKPl--a~n~~e~~~iveaA~~r 122 (351)
T KOG2741|consen 60 AYGSYEELAKDPE------------VDVVYISTPNPQHYEVVMLALNKGKHVLC---EKPL--AMNVAEAEEIVEAAEAR 122 (351)
T ss_pred cccCHHHHhcCCC------------cCEEEeCCCCccHHHHHHHHHHcCCcEEe---cccc--cCCHHHHHHHHHHHHHc
Confidence 6777777776555 57777766432111110001122333444 2334 36788999999999999
Q ss_pred CcEEEEccccccc
Q 013521 247 GSIIVYDSAYAAY 259 (441)
Q Consensus 247 ~~~ii~De~~~~~ 259 (441)
| +.+.|..|.-+
T Consensus 123 g-v~~meg~~~R~ 134 (351)
T KOG2741|consen 123 G-VFFMEGLWWRF 134 (351)
T ss_pred C-cEEEeeeeeec
Confidence 8 67777777644
No 463
>PF08222 HTH_CodY: CodY helix-turn-helix domain; InterPro: IPR013198 This family consists of the C-terminal helix-turn-helix domain found in several bacterial GTP-sensing transcriptional pleiotropic repressor CodY proteins. CodY has been found to repress the dipeptide transport operon (dpp) of Bacillus subtilis in nutrient-rich conditions []. The CodY protein also has a repressor effect on many genes in Lactococcus lactis during growth in milk [].; PDB: 2B0L_C.
Probab=35.34 E-value=20 Score=24.04 Aligned_cols=27 Identities=7% Similarity=-0.007 Sum_probs=21.3
Q ss_pred ccchhhhHHhhhhCCC----CCccccccccc
Q 013521 16 KATVPFTMDFFLSSRW----PVPRHCTEVSR 42 (441)
Q Consensus 16 ~~Tv~~a~~~l~~~g~----~~~~~g~~v~~ 42 (441)
|++++.|+..|++-|. +-.=+|||...
T Consensus 18 RSvIVNALRKleSaGvIesrSlGmKGT~ikv 48 (61)
T PF08222_consen 18 RSVIVNALRKLESAGVIESRSLGMKGTYIKV 48 (61)
T ss_dssp HHHHHHHHHHHHHTTSEEEEETTSS-EEEEE
T ss_pred HHHHHHHHHHHHhcCceeecccCCCceeeee
Confidence 7889999999999999 44456888753
No 464
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=35.26 E-value=33 Score=31.89 Aligned_cols=27 Identities=26% Similarity=0.368 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccc
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAA 258 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~ 258 (441)
+.++++++++.|+++|+.||.|-+...
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH 76 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNH 76 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSE
T ss_pred hhhhhhhhhhccccccceEEEeeeccc
Confidence 378999999999999999999988764
No 465
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=35.26 E-value=89 Score=21.73 Aligned_cols=34 Identities=12% Similarity=0.316 Sum_probs=23.6
Q ss_pred cEEEEcCCCCccccCCC-HHHHHHHHHHHHHcCcEEEEc
Q 013521 216 DIIFFCSPNNPTGHAAT-WQQLKKLVEFAKANGSIIVYD 253 (441)
Q Consensus 216 ~~v~i~~p~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~D 253 (441)
..+++.+|... ++ .+++++|.+|+++=|-+||.|
T Consensus 36 ~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 36 GTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 34455566422 34 588999999999877777765
No 466
>PF13412 HTH_24: Winged helix-turn-helix DNA-binding; PDB: 1I1G_B 2IA0_B 3I4P_A 2GQQ_A 2L4A_A 2CFX_B 2DBB_B 2EFO_A 2EFQ_A 2PN6_A ....
Probab=34.94 E-value=21 Score=22.77 Aligned_cols=18 Identities=11% Similarity=-0.056 Sum_probs=15.7
Q ss_pred CcccchhhhHHhhhhCCC
Q 013521 14 PLKATVPFTMDFFLSSRW 31 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~ 31 (441)
-+++||.+.+.+|+++|+
T Consensus 29 is~~tv~~~l~~L~~~g~ 46 (48)
T PF13412_consen 29 ISRSTVNRYLKKLEEKGL 46 (48)
T ss_dssp S-HHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHCcC
Confidence 348999999999999997
No 467
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=34.90 E-value=44 Score=35.00 Aligned_cols=35 Identities=23% Similarity=0.494 Sum_probs=28.7
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccc
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAY 259 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~ 259 (441)
+|+.|++ ..++++++++-||++|+-||.|-+|...
T Consensus 220 ~p~~~~~---~~~efk~lV~~~H~~Gi~VilDvV~NH~ 254 (605)
T TIGR02104 220 NPYDPAT---RIRELKQMIQALHENGIRVIMDVVYNHT 254 (605)
T ss_pred CCCccch---HHHHHHHHHHHHHHCCCEEEEEEEcCCc
Confidence 4555544 3588999999999999999999998754
No 468
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=34.79 E-value=12 Score=34.83 Aligned_cols=91 Identities=12% Similarity=0.180 Sum_probs=58.9
Q ss_pred hCCCCCCcEEEcCCcHHHHHHH--HHhcCCC-CEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCcc
Q 013521 130 DMGIEGDEIFISDGAQSDISRL--QMLLGSN-VTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFF 206 (441)
Q Consensus 130 ~~~~~~~~I~~t~G~~~al~~l--~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~ 206 (441)
+..++|||++.|+.+..|..-| +.+.+.- ....+.+|+|.+|+-....+|.. - .+..
T Consensus 184 HRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~e------------K--------ydks 243 (400)
T KOG0604|consen 184 HRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPE------------K--------YDKS 243 (400)
T ss_pred hccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCch------------h--------cCCC
Confidence 4457899999988887765533 5555433 36888999999999888888831 1 1222
Q ss_pred CCCCCCCCccEEEEc-CC--CCccccCCCHHHHHHHH
Q 013521 207 PDLSTTSRTDIIFFC-SP--NNPTGHAATWQQLKKLV 240 (441)
Q Consensus 207 ~~~~~~~~~~~v~i~-~p--~NPtG~~~~~~~~~~i~ 240 (441)
.|+....-.-.|++| .| -.-.|..+|+.-+.+|.
T Consensus 244 cdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~ 280 (400)
T KOG0604|consen 244 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIR 280 (400)
T ss_pred CCccchhHHHHHhhcCCCcccccCCccCChhHHhHhh
Confidence 333332223345567 55 23378888888777776
No 469
>PRK09108 type III secretion system protein HrcU; Validated
Probab=34.45 E-value=26 Score=33.75 Aligned_cols=20 Identities=30% Similarity=0.139 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHcCcEEEEcc
Q 013521 235 QLKKLVEFAKANGSIIVYDS 254 (441)
Q Consensus 235 ~~~~i~~~a~~~~~~ii~De 254 (441)
--.+|.+.|++||+.|++|-
T Consensus 292 ~A~~Ir~~A~e~~VPvven~ 311 (353)
T PRK09108 292 GALALRRHAHALGIPIVGNP 311 (353)
T ss_pred HHHHHHHHHHHcCCCEEeCH
Confidence 45789999999999999995
No 470
>PF01047 MarR: MarR family; InterPro: IPR000835 The MarR-type HTH domain is a DNA-binding, winged helix-turn-helix (wHTH) domain of about 135 amino acids present in transcription regulators of the MarR/SlyA family, involved in the development of antibiotic resistance. This family of transcription regulators is named after Escherichia coli MarR, a repressor of genes which activate the multiple antibiotic resistance and oxidative stress regulons, and after slyA from Salmonella typhimurium and E. coli, a transcription regulator that is required for virulence and survival in the macrophage environment. Regulators with the MarR-type HTH domain are present in bacteria and archaea and control a variety of biological functions, including resistance to multiple antibiotics, household disinfectants, organic solvents, oxidative stress agents and regulation of the virulence factor synthesis in pathogens of humans and plants. Many of the MarR-like regulators respond to aromatic compounds [, , ]. The crystal structures of MarR, MexR and SlyA have been determined and show a winged HTH DNA-binding core flanked by helices involved in dimerisation. The DNA-binding domains are ascribed to the superfamily of winged helix proteins, containing a three (four)-helix (H) bundle and a three-stranded antiparallel beta-sheet (B) in the topology: H1-(H1')-H2-B1-H3-H4-B2-B3-H5-H6. Helices 3 and 4 comprise the helix-turn-helix motif and the beta-sheet is called the wing. Helix 4 is termed the recognition helix, like in other HTHs where it binds the DNA major groove. The helices 1, 5 and 6 are involved in dimerisation, as most MarR-like transcription regulators form dimers [, ]. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1JGS_A 2NYX_D 2PEX_B 2PFB_A 3BPX_A 3BPV_A 2BV6_A 3BJA_A 3E6M_B 2ETH_A ....
Probab=33.97 E-value=22 Score=23.78 Aligned_cols=16 Identities=13% Similarity=0.075 Sum_probs=15.7
Q ss_pred ccchhhhHHhhhhCCC
Q 013521 16 KATVPFTMDFFLSSRW 31 (441)
Q Consensus 16 ~~Tv~~a~~~l~~~g~ 31 (441)
++||++..+.|+..||
T Consensus 31 ~~~~t~~i~~L~~~g~ 46 (59)
T PF01047_consen 31 RSTVTRIIKRLEKKGL 46 (59)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHHHCCC
Confidence 8999999999999999
No 471
>smart00420 HTH_DEOR helix_turn_helix, Deoxyribose operon repressor.
Probab=33.83 E-value=21 Score=22.91 Aligned_cols=19 Identities=5% Similarity=-0.057 Sum_probs=17.0
Q ss_pred CCcccchhhhHHhhhhCCC
Q 013521 13 TPLKATVPFTMDFFLSSRW 31 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~ 31 (441)
+..+.||.+.++.|++.||
T Consensus 25 ~~s~~tv~~~l~~L~~~g~ 43 (53)
T smart00420 25 GVSEMTIRRDLNKLEEQGL 43 (53)
T ss_pred CCCHHHHHHHHHHHHHCCC
Confidence 3458999999999999999
No 472
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=33.70 E-value=66 Score=33.14 Aligned_cols=29 Identities=28% Similarity=0.324 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCcEEEEcccccccc
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAYI 260 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~~ 260 (441)
+.++++++++.|+++|+-||.|-++....
T Consensus 158 ~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 158 GPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 57899999999999999999999987543
No 473
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=33.57 E-value=67 Score=27.99 Aligned_cols=104 Identities=12% Similarity=0.172 Sum_probs=51.1
Q ss_pred CCcHHHHH-HHHHhcCCCCEEEEeCCCchhhHhHHHHhccccccccccCccceeEEeecCCCCCccCCCCC---CCCccE
Q 013521 142 DGAQSDIS-RLQMLLGSNVTVAVQDPSFPAYIDTSVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLST---TSRTDI 217 (441)
Q Consensus 142 ~G~~~al~-~l~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~---~~~~~~ 217 (441)
+|=|+-|- .+...-..|..|++..|....-...-....+.|. ....+....+.++...+.. ...++.
T Consensus 15 SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~V~Sr~G~---------~~~A~~i~~~~~i~~~i~~~~~~~~~~~ 85 (201)
T COG1435 15 SGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGKVSSRIGL---------SSEAVVIPSDTDIFDEIAALHEKPPVDC 85 (201)
T ss_pred CcchHHHHHHHHHHHHcCCeEEEEecccccccccceeeeccCC---------cccceecCChHHHHHHHHhcccCCCcCE
Confidence 44444332 3455556778888888877654333222222221 2222222222111111111 112556
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccccc
Q 013521 218 IFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYAAY 259 (441)
Q Consensus 218 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~~~ 259 (441)
|++.-.|. ++++....+.+++.+.|+.||+=.--.+|
T Consensus 86 v~IDEaQF-----~~~~~v~~l~~lad~lgi~Vi~~GL~~DF 122 (201)
T COG1435 86 VLIDEAQF-----FDEELVYVLNELADRLGIPVICYGLDTDF 122 (201)
T ss_pred EEEehhHh-----CCHHHHHHHHHHHhhcCCEEEEecccccc
Confidence 66654443 56677777777777777777765444443
No 474
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=33.54 E-value=44 Score=31.83 Aligned_cols=26 Identities=27% Similarity=0.406 Sum_probs=23.5
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEE
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIV 251 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii 251 (441)
+.+-.++++++++|++.|+++|+-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45678999999999999999999887
No 475
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=33.43 E-value=29 Score=33.88 Aligned_cols=42 Identities=7% Similarity=0.124 Sum_probs=28.6
Q ss_pred CCccEEEEcCC-CCccccCCCH--------------HHHHHHHHHHHHcCcEEEEccc
Q 013521 213 SRTDIIFFCSP-NNPTGHAATW--------------QQLKKLVEFAKANGSIIVYDSA 255 (441)
Q Consensus 213 ~~~~~v~i~~p-~NPtG~~~~~--------------~~~~~i~~~a~~~~~~ii~De~ 255 (441)
++.++ +++|| |.--+.-|.+ +--.+|.++|++||+.|++|-.
T Consensus 261 ~~AdV-VItNPTH~AVALkY~~~~~~AP~VvAKG~d~~A~~Ir~~A~e~~VPiven~p 317 (386)
T PRK12468 261 PKADV-IVTNPTHYAVALQYNESKMSAPKVLAKGAGAVALRIRELGAEHRIPLLEAPP 317 (386)
T ss_pred CCCcE-EEECCCceEEEEEeCCCCCCCCEEEEeeCcHHHHHHHHHHHHcCCcEEeCHH
Confidence 55565 44577 5544444432 3357899999999999999953
No 476
>PF12802 MarR_2: MarR family; PDB: 3ECO_B 2QWW_B 3KP6_B 3KP4_B 3KP2_A 3KP5_A 3KP3_B 3KP7_A 3NQO_B 3K0L_B ....
Probab=33.38 E-value=23 Score=23.93 Aligned_cols=18 Identities=17% Similarity=-0.021 Sum_probs=16.1
Q ss_pred CcccchhhhHHhhhhCCC
Q 013521 14 PLKATVPFTMDFFLSSRW 31 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~ 31 (441)
..++||++..+.|++.||
T Consensus 33 ~~~~~vs~~v~~L~~~Gl 50 (62)
T PF12802_consen 33 ISKSTVSRIVKRLEKKGL 50 (62)
T ss_dssp S-HHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHHHHHCCC
Confidence 448999999999999999
No 477
>smart00418 HTH_ARSR helix_turn_helix, Arsenical Resistance Operon Repressor.
Probab=33.32 E-value=24 Score=23.60 Aligned_cols=18 Identities=11% Similarity=0.067 Sum_probs=16.6
Q ss_pred CcccchhhhHHhhhhCCC
Q 013521 14 PLKATVPFTMDFFLSSRW 31 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~ 31 (441)
..++||.++++.|+++||
T Consensus 22 is~~~v~~~l~~L~~~g~ 39 (66)
T smart00418 22 LSQSTVSHHLKKLREAGL 39 (66)
T ss_pred CCHHHHHHHHHHHHHCCC
Confidence 458999999999999999
No 478
>PRK08156 type III secretion system protein SpaS; Validated
Probab=33.09 E-value=26 Score=33.81 Aligned_cols=21 Identities=19% Similarity=0.222 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHcCcEEEEccc
Q 013521 235 QLKKLVEFAKANGSIIVYDSA 255 (441)
Q Consensus 235 ~~~~i~~~a~~~~~~ii~De~ 255 (441)
--.+|.++|++||+.|++|-.
T Consensus 285 ~A~~IreiA~e~~VPiven~p 305 (361)
T PRK08156 285 RALAVRAYAEKVGVPVVRDIK 305 (361)
T ss_pred HHHHHHHHHHHCCCCEeeCHH
Confidence 357899999999999999953
No 479
>PRK06298 type III secretion system protein; Validated
Probab=32.83 E-value=30 Score=33.40 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=28.6
Q ss_pred CCccEEEEcCC-CCccccCCCH--------------HHHHHHHHHHHHcCcEEEEccc
Q 013521 213 SRTDIIFFCSP-NNPTGHAATW--------------QQLKKLVEFAKANGSIIVYDSA 255 (441)
Q Consensus 213 ~~~~~v~i~~p-~NPtG~~~~~--------------~~~~~i~~~a~~~~~~ii~De~ 255 (441)
++.++ +++|| |.--+.-|.+ +.-.+|.++|++||+.+|+|-.
T Consensus 255 ~~AdV-VItNPTH~AVALkYd~~~~~AP~VvAKG~d~~A~~Ir~iA~e~~VPiven~p 311 (356)
T PRK06298 255 KHASA-VVSNPKDIAVAIGYMPEKYKAPWIIAMGINLRAKRIIAEAEKYGVPIMRNVP 311 (356)
T ss_pred CCCcE-EEECCCceEEEeEeCCCCCCCCEEEEeeCcHHHHHHHHHHHHcCCCEEeCHH
Confidence 45555 45677 5444444432 3457899999999999999953
No 480
>PRK11050 manganese transport regulator MntR; Provisional
Probab=32.24 E-value=25 Score=29.22 Aligned_cols=29 Identities=10% Similarity=-0.020 Sum_probs=22.2
Q ss_pred CCcccchhhhHHhhhhCCC--CCcccccccc
Q 013521 13 TPLKATVPFTMDFFLSSRW--PVPRHCTEVS 41 (441)
Q Consensus 13 ~~~~~Tv~~a~~~l~~~g~--~~~~~g~~v~ 41 (441)
+..++||++++..|++.|| .+++.|++++
T Consensus 62 ~is~stVsr~l~~Le~~GlI~r~~~~~v~LT 92 (152)
T PRK11050 62 GVSQPTVAKMLKRLARDGLVEMRPYRGVFLT 92 (152)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEecCCceEEC
Confidence 3459999999999999999 4445565544
No 481
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=31.62 E-value=1.2e+02 Score=28.50 Aligned_cols=111 Identities=12% Similarity=0.108 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH-HHHHhcCCCC--EEEE--eCCCchhhHhHHHHhccccccccccCcc
Q 013521 117 MALRTAIADKFYKDMGIEGDEIFISDGAQSDIS-RLQMLLGSNV--TVAV--QDPSFPAYIDTSVIVGQAGKFLKETGKY 191 (441)
Q Consensus 117 ~~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~-~l~~l~~~gd--~Vlv--~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 191 (441)
...++.|+++-... +...++++|-|.+.... .|....+.|. .|++ ..|.+.+ ...+..+...|
T Consensus 99 ~~a~~~I~~~a~~~--i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~~a~~L~~~g--------- 166 (301)
T TIGR00511 99 DKAQERIGEIGAKR--IRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HITAKELRDYG--------- 166 (301)
T ss_pred HHHHHHHHHHHHHH--cCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HHHHHHHHHCC---------
Confidence 34455555554332 34556888888765544 4555544443 4444 3356666 34444443333
Q ss_pred ceeEEeecCCCCCccCCCCCCCCccEEEE-------c-CCCCccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 192 RNIVYMNCRPENNFFPDLSTTSRTDIIFF-------C-SPNNPTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 192 ~~v~~v~~~~~~~~~~~~~~~~~~~~v~i-------~-~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
+++..++-..- ... + ++++.+++ + .--|..|+ ..++-.|+.|++.+++
T Consensus 167 I~vtlI~Dsa~-~~~--m---~~vd~VivGad~v~~nG~v~nkiGT-------~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 167 IPVTLIVDSAV-RYF--M---KEVDHVVVGADAITANGALINKIGT-------SQLALAAREARVPFMV 222 (301)
T ss_pred CCEEEEehhHH-HHH--H---HhCCEEEECccEEecCCCEEEHHhH-------HHHHHHHHHhCCCEEE
Confidence 36666643211 111 1 23444443 2 12455554 4677788899988775
No 482
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=31.17 E-value=2.1e+02 Score=25.51 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=25.7
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEE
Q 013521 214 RTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSII 250 (441)
Q Consensus 214 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i 250 (441)
+.+.|+ +|.+++..++.++-.+|++-|+.+
T Consensus 86 ~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 86 KVDGIV-------AGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred cccEEE-------EchhhhHHHHHHHHHHHHHhCCEE
Confidence 355666 899999999999999999999854
No 483
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=30.81 E-value=58 Score=32.59 Aligned_cols=26 Identities=12% Similarity=0.170 Sum_probs=23.4
Q ss_pred ccccCCCHHHHHHHHHHHHHcCcEEE
Q 013521 226 PTGHAATWQQLKKLVEFAKANGSIIV 251 (441)
Q Consensus 226 PtG~~~~~~~~~~i~~~a~~~~~~ii 251 (441)
+.|-.++++++++|++.|+++|+-||
T Consensus 89 ~~~g~YT~~di~eiv~yA~~rgI~VI 114 (445)
T cd06569 89 SGSGYYSRADYIEILKYAKARHIEVI 114 (445)
T ss_pred ccCCccCHHHHHHHHHHHHHcCCEEE
Confidence 44668999999999999999999988
No 484
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=30.60 E-value=38 Score=23.59 Aligned_cols=26 Identities=31% Similarity=0.434 Sum_probs=21.0
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCc
Q 013521 222 SPNNPTGHAATWQQLKKLVEFAKANGS 248 (441)
Q Consensus 222 ~p~NPtG~~~~~~~~~~i~~~a~~~~~ 248 (441)
.++-|.|.+ +.++++.|++++++|+.
T Consensus 13 ~~~~~~G~i-~~~~l~~la~ia~~yg~ 38 (69)
T PF03460_consen 13 RIRIPGGRI-SAEQLRALAEIAEKYGD 38 (69)
T ss_dssp EEB-GGGEE-EHHHHHHHHHHHHHHST
T ss_pred EEeCCCEEE-CHHHHHHHHHHHHHhCC
Confidence 445667887 88999999999999984
No 485
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=30.54 E-value=3.2e+02 Score=22.76 Aligned_cols=38 Identities=16% Similarity=0.228 Sum_probs=31.2
Q ss_pred CCCCCcEEEcCCcHHHHHHHHHhcCCCCEEEEeCCCch
Q 013521 132 GIEGDEIFISDGAQSDISRLQMLLGSNVTVAVQDPSFP 169 (441)
Q Consensus 132 ~~~~~~I~~t~G~~~al~~l~~l~~~gd~Vlv~~p~y~ 169 (441)
.++...|++..|+.-|...+..+++.|..|.+-+|...
T Consensus 10 ~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~~~ 47 (157)
T PRK06719 10 NLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPEIC 47 (157)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCccC
Confidence 45677999999999999988888888888877777763
No 486
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=30.13 E-value=1.4e+02 Score=28.33 Aligned_cols=117 Identities=10% Similarity=0.064 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhhhCCCCCCcEEEcCCcHHHHH-HHHHhcCCC--CEEEEe--CCCchhhHhHHHHhccccccccccCccc
Q 013521 118 ALRTAIADKFYKDMGIEGDEIFISDGAQSDIS-RLQMLLGSN--VTVAVQ--DPSFPAYIDTSVIVGQAGKFLKETGKYR 192 (441)
Q Consensus 118 ~lr~~ia~~l~~~~~~~~~~I~~t~G~~~al~-~l~~l~~~g--d~Vlv~--~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 192 (441)
..++.|+++-... +...++++|.|.+.... .|....+.| -.|++. .|...+ ...+..+...| +
T Consensus 105 ~~~~~I~~~a~~~--i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~~~a~~L~~~G---------I 172 (310)
T PRK08535 105 NAVEKIGEIGAKR--IRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-HITAKELAEYG---------I 172 (310)
T ss_pred HHHHHHHHHHHHH--cCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-HHHHHHHHHCC---------C
Confidence 3455555554332 34567888888775554 465555444 345553 355555 33444333223 3
Q ss_pred eeEEeecCCCCCccCCCCCCCCccEEEEc-CCCCccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 193 NIVYMNCRPENNFFPDLSTTSRTDIIFFC-SPNNPTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 193 ~v~~v~~~~~~~~~~~~~~~~~~~~v~i~-~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
++..++-..-.-.. ++++.+++- .---+.|.+...-=-..++-.|+.|++.+++
T Consensus 173 ~vtlI~Dsav~~~m------~~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 173 PVTLIVDSAVRYFM------KDVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred CEEEEehhHHHHHH------HhCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 66665532211111 334554442 2122233333332244677788899988775
No 487
>TIGR01404 FlhB_rel_III type III secretion protein, YscU/HrpY family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs.
Probab=30.06 E-value=33 Score=32.95 Aligned_cols=21 Identities=24% Similarity=0.276 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHcCcEEEEccc
Q 013521 235 QLKKLVEFAKANGSIIVYDSA 255 (441)
Q Consensus 235 ~~~~i~~~a~~~~~~ii~De~ 255 (441)
.-.+|.++|++||+.+++|-.
T Consensus 289 ~A~~Ir~iA~e~~VPiven~p 309 (342)
T TIGR01404 289 QALAVRAYAEEAGIPVVRDIP 309 (342)
T ss_pred HHHHHHHHHHHcCCCEeeCHH
Confidence 457899999999999999953
No 488
>TIGR00328 flhB flagellar biosynthetic protein FlhB. FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella.
Probab=29.55 E-value=43 Score=32.19 Aligned_cols=21 Identities=29% Similarity=0.276 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHcCcEEEEccc
Q 013521 235 QLKKLVEFAKANGSIIVYDSA 255 (441)
Q Consensus 235 ~~~~i~~~a~~~~~~ii~De~ 255 (441)
.-.+|.++|++||+.+++|-.
T Consensus 290 ~A~~I~~~A~~~~vPi~~~~~ 310 (347)
T TIGR00328 290 LALKIKEIARENNVPIVENPP 310 (347)
T ss_pred HHHHHHHHHHHcCCCEEeCHH
Confidence 456899999999999999964
No 489
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=29.42 E-value=65 Score=22.05 Aligned_cols=35 Identities=17% Similarity=0.444 Sum_probs=23.1
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCcEEEEccccc
Q 013521 223 PNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYA 257 (441)
Q Consensus 223 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~ 257 (441)
|..|.+...+.+++++.++-..+.+.+.+.++.|.
T Consensus 25 ~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Yk 59 (60)
T PF08672_consen 25 PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSYK 59 (60)
T ss_dssp -GGG--TT--HHHHHHHHHHHHHTTSEE--TTEEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEEe
Confidence 45678888999999999988888888888887763
No 490
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=29.29 E-value=57 Score=33.01 Aligned_cols=28 Identities=18% Similarity=0.165 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHcCcEEEEccccccc
Q 013521 232 TWQQLKKLVEFAKANGSIIVYDSAYAAY 259 (441)
Q Consensus 232 ~~~~~~~i~~~a~~~~~~ii~De~~~~~ 259 (441)
+.++++++++.|+++|+.||.|-+....
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~NH~ 106 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLNHK 106 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccc
Confidence 6789999999999999999999887653
No 491
>PF13463 HTH_27: Winged helix DNA-binding domain; PDB: 3GFL_A 2YR2_B 3GFM_A 3GFJ_A 3GF2_A 3GEZ_A 2GXG_A 3GFI_A 2EB7_A.
Probab=28.96 E-value=39 Score=23.22 Aligned_cols=18 Identities=17% Similarity=-0.005 Sum_probs=15.6
Q ss_pred CcccchhhhHHhhhhCCC
Q 013521 14 PLKATVPFTMDFFLSSRW 31 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~ 31 (441)
..+.||+++.+.|++.||
T Consensus 30 ~~~~~vs~~i~~L~~~gl 47 (68)
T PF13463_consen 30 ISKSTVSRIIKKLEEKGL 47 (68)
T ss_dssp --HHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHHHHHCCC
Confidence 348899999999999999
No 492
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=28.85 E-value=1.5e+02 Score=27.88 Aligned_cols=120 Identities=13% Similarity=0.089 Sum_probs=57.5
Q ss_pred HHHHHHHHHhhhCCCCCCcEEEcCCcH---------HHHHHHHHhcCCC--CEEEEe--CCCchhhHhHHHHhccccccc
Q 013521 119 LRTAIADKFYKDMGIEGDEIFISDGAQ---------SDISRLQMLLGSN--VTVAVQ--DPSFPAYIDTSVIVGQAGKFL 185 (441)
Q Consensus 119 lr~~ia~~l~~~~~~~~~~I~~t~G~~---------~al~~l~~l~~~g--d~Vlv~--~p~y~~~~~~~~~~g~~~~~~ 185 (441)
.++.|+++-.+. +...++++|.|.+ .++..|....+.| -.|++. .|.+.+....+..+...|
T Consensus 104 ~~~~Ia~~a~~~--I~~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L~~~g--- 178 (303)
T TIGR00524 104 TNRKIGENGAKL--IKDGDTVLTHCNAGALATSDYGTALGVIRSAWEDGKRIRVIACETRPRNQGSRLTAWELMQDG--- 178 (303)
T ss_pred HHHHHHHHHHHH--ccCCCEEEEecCCccccccCcchHHHHHHHHHHcCCceEEEECCCCCccchHHHHHHHHHHCC---
Confidence 445555553322 3456788888766 2334444444443 345553 577766333344433222
Q ss_pred cccCccceeEEeecCCCCCccCCCCCCCCccEEEEc-CCCCccccCCCHHHHHHHHHHHHHcCcEEEEc
Q 013521 186 KETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFC-SPNNPTGHAATWQQLKKLVEFAKANGSIIVYD 253 (441)
Q Consensus 186 ~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~-~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D 253 (441)
+++..++-..- .... . ..+++.+++- .--...|.++.+-=--.++-.|+.|++.+++=
T Consensus 179 ------I~vtlI~Dsa~-~~~m--~-~~~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 179 ------IDVTLITDSMA-AYFM--Q-KGEIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred ------CCEEEEChhHH-HHHc--c-ccCCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 35665543211 1111 1 1245555542 22222333333222346777788999888753
No 493
>COG3355 Predicted transcriptional regulator [Transcription]
Probab=28.80 E-value=34 Score=27.40 Aligned_cols=18 Identities=17% Similarity=0.152 Sum_probs=16.7
Q ss_pred CcccchhhhHHhhhhCCC
Q 013521 14 PLKATVPFTMDFFLSSRW 31 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~ 31 (441)
..|+||.+|+..|..-|+
T Consensus 54 r~rStv~rsl~~L~~~Gl 71 (126)
T COG3355 54 RSRSTVYRSLQNLLEAGL 71 (126)
T ss_pred ccHHHHHHHHHHHHHcCC
Confidence 459999999999999999
No 494
>PF01978 TrmB: Sugar-specific transcriptional regulator TrmB; InterPro: IPR002831 TrmB, is a protein of 38,800 apparent molecular weight, that is involved in the maltose-specific regulation of the trehalose/maltose ABC transport operon in Thermococcus litoralis. TrmB has been shown to be a maltose-specific repressor, and this inhibition is counteracted by maltose and trehalose. TrmB binds maltose and trehalose half-maximally at 20 uM and 0.5 mM sugar concentration, respectively []. Other members of this family are annotated as either transcriptional regulators or hypothetical proteins. ; PDB: 2D1H_A 3QPH_A 1SFX_A.
Probab=28.75 E-value=31 Score=23.95 Aligned_cols=18 Identities=11% Similarity=-0.042 Sum_probs=16.6
Q ss_pred CcccchhhhHHhhhhCCC
Q 013521 14 PLKATVPFTMDFFLSSRW 31 (441)
Q Consensus 14 ~~~~Tv~~a~~~l~~~g~ 31 (441)
..++||.++++.|++.||
T Consensus 34 i~~~~v~~~L~~L~~~Gl 51 (68)
T PF01978_consen 34 ISRSTVYRALKSLEEKGL 51 (68)
T ss_dssp SSHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHHHHHCCC
Confidence 349999999999999999
No 495
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=28.69 E-value=62 Score=28.18 Aligned_cols=33 Identities=33% Similarity=0.444 Sum_probs=26.8
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEE
Q 013521 217 IIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVY 252 (441)
Q Consensus 217 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 252 (441)
+-+||---|+.|..+. ..++.++|++||+.+|.
T Consensus 158 a~VicEi~~~dG~mar---~~~~~~fa~~h~l~~it 190 (203)
T COG0108 158 AGVICEIMNDDGTMAR---LPELEEFAKEHGLPVIT 190 (203)
T ss_pred cEEEEEEeCCCccccC---hHHHHHHHHHcCCcEEE
Confidence 4466777788999999 66788888999998884
No 496
>PLN02955 8-amino-7-oxononanoate synthase
Probab=28.01 E-value=3.5e+02 Score=27.35 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=38.4
Q ss_pred CCCCCcCcHHHHHHHHHHHhh-hCCCCCCcEEEcCCcHH---HHHH-HHHhcCCCCEEEEeCCCchhhHhHHHHh
Q 013521 109 GYGAEQGNMALRTAIADKFYK-DMGIEGDEIFISDGAQS---DISR-LQMLLGSNVTVAVQDPSFPAYIDTSVIV 178 (441)
Q Consensus 109 ~Y~~~~g~~~lr~~ia~~l~~-~~~~~~~~I~~t~G~~~---al~~-l~~l~~~gd~Vlv~~p~y~~~~~~~~~~ 178 (441)
+|---...++++++..+-+.+ +.+...... .+|.+. -++- |..+++..+.++ ..-+|.....++..+
T Consensus 111 dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl--~~G~~~~h~~LE~~LA~f~g~e~all-~sSGy~AN~~~i~aL 182 (476)
T PLN02955 111 DYLGLSSHPTISNAAANAAKEYGMGPKGSAL--ICGYTTYHRLLESSLADLKKKEDCLV-CPTGFAANMAAMVAI 182 (476)
T ss_pred CccCCCCCHHHHHHHHHHHHHcCCCCCCcCc--cccChHHHHHHHHHHHHHHCCCcEEE-ECChHHHHHHHHHHH
Confidence 455555678888888887765 544444443 344432 2443 666676555555 455776655555443
No 497
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=27.93 E-value=52 Score=30.78 Aligned_cols=39 Identities=5% Similarity=0.087 Sum_probs=27.7
Q ss_pred CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEccccc
Q 013521 213 SRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYDSAYA 257 (441)
Q Consensus 213 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~~~ 257 (441)
.++|.+++.+-.. +.++-++|.++|+++|+.|+==.+.+
T Consensus 88 ~gvk~avI~s~Gf------~~~~~~~l~~~a~~~girvlGPNc~G 126 (291)
T PRK05678 88 AGIDLIVCITEGI------PVLDMLEVKAYLERKKTRLIGPNCPG 126 (291)
T ss_pred CCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEECCCCCc
Confidence 5677766655433 34555699999999999999666655
No 498
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=27.59 E-value=41 Score=24.97 Aligned_cols=22 Identities=32% Similarity=0.350 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCcEEEEccccc
Q 013521 236 LKKLVEFAKANGSIIVYDSAYA 257 (441)
Q Consensus 236 ~~~i~~~a~~~~~~ii~De~~~ 257 (441)
-++|++.|++||+.|.+|..-.
T Consensus 34 Ae~II~~Ake~~Vpi~edp~Lv 55 (92)
T COG2257 34 AEKIIEKAKEHGVPIQEDPLLV 55 (92)
T ss_pred HHHHHHHHHHcCCCcccCHHHH
Confidence 6799999999999999997543
No 499
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=27.41 E-value=3.4e+02 Score=27.25 Aligned_cols=130 Identities=15% Similarity=0.156 Sum_probs=74.7
Q ss_pred CcCcHHHHHHHHHHHhhhCC-------------CCCCcEEEcCCcHHHHHH-HHHhcC--CCCE-EEE-eCCCchhhHhH
Q 013521 113 EQGNMALRTAIADKFYKDMG-------------IEGDEIFISDGAQSDISR-LQMLLG--SNVT-VAV-QDPSFPAYIDT 174 (441)
Q Consensus 113 ~~g~~~lr~~ia~~l~~~~~-------------~~~~~I~~t~G~~~al~~-l~~l~~--~gd~-Vlv-~~p~y~~~~~~ 174 (441)
..+..+|.+.|-+|+...+. +...++++|=|.+..++. |....+ +.=. |+| ..|.+.|- ..
T Consensus 324 ~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~-~~ 402 (556)
T KOG1467|consen 324 SEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGR-KL 402 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchH-HH
Confidence 45666677777666643221 456799999999999886 443333 3223 344 45777663 33
Q ss_pred HHHhccccccccccCccceeEEeecCCCCCccCCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCcEEEEc-
Q 013521 175 SVIVGQAGKFLKETGKYRNIVYMNCRPENNFFPDLSTTSRTDIIFFCSPNNPTGHAATWQQLKKLVEFAKANGSIIVYD- 253 (441)
Q Consensus 175 ~~~~g~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D- 253 (441)
.+.+-.+| +++.++-+..- .+.. . .-+++++=++.----|.+|+..=-..|+=+|+.|++.||+=
T Consensus 403 lr~Lv~~G---------inctYv~I~a~-syim-~---evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCC 468 (556)
T KOG1467|consen 403 LRRLVDRG---------INCTYVLINAA-SYIM-L---EVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCC 468 (556)
T ss_pred HHHHHHcC---------CCeEEEEehhH-HHHH-H---hcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEe
Confidence 33333333 36666655432 2211 1 22344333355444588998766667777788999988753
Q ss_pred cccc
Q 013521 254 SAYA 257 (441)
Q Consensus 254 e~~~ 257 (441)
|.|-
T Consensus 469 E~yK 472 (556)
T KOG1467|consen 469 EAYK 472 (556)
T ss_pred chhh
Confidence 4443
No 500
>PRK05702 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=27.34 E-value=41 Score=32.53 Aligned_cols=21 Identities=24% Similarity=0.232 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHcCcEEEEccc
Q 013521 235 QLKKLVEFAKANGSIIVYDSA 255 (441)
Q Consensus 235 ~~~~i~~~a~~~~~~ii~De~ 255 (441)
.-.+|.+.|++||+.+++|-.
T Consensus 297 ~A~~i~~~A~~~~vpi~~~~~ 317 (359)
T PRK05702 297 VALKIREIAREHNVPIVENPP 317 (359)
T ss_pred HHHHHHHHHHHcCCCEEeCHH
Confidence 457899999999999999964
Done!