Query         013522
Match_columns 441
No_of_seqs    388 out of 2622
Neff          8.6 
Searched_HMMs 29240
Date          Mon Mar 25 12:10:14 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013522.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013522hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.3E-69 7.8E-74  524.4  27.1  262   17-279    30-298 (311)
  2 3hyh_A Carbon catabolite-derep 100.0 1.9E-68 6.4E-73  510.7  26.8  258   18-279    12-270 (275)
  3 4fih_A Serine/threonine-protei 100.0 1.5E-66 5.3E-71  511.7  28.8  258   18-281    73-333 (346)
  4 4b9d_A Serine/threonine-protei 100.0 1.4E-66 4.8E-71  512.8  26.5  259   18-280    23-285 (350)
  5 4fie_A Serine/threonine-protei 100.0 5.5E-65 1.9E-69  512.6  31.0  258   18-281   150-410 (423)
  6 3ubd_A Ribosomal protein S6 ki 100.0 4.6E-66 1.6E-70  500.7  22.0  256   19-278    24-288 (304)
  7 3fpq_A Serine/threonine-protei 100.0 8.1E-64 2.8E-68  482.4  29.3  255   16-277    22-288 (290)
  8 4g3f_A NF-kappa-beta-inducing  100.0 1.8E-63 6.3E-68  488.3  24.7  253   18-279    57-330 (336)
  9 2y94_A 5'-AMP-activated protei 100.0 4.6E-61 1.6E-65  495.2  35.5  393   11-406     8-475 (476)
 10 4b99_A Mitogen-activated prote 100.0 1.4E-61 4.6E-66  487.5  28.7  261   17-279    52-352 (398)
 11 3v5w_A G-protein coupled recep 100.0 3.6E-60 1.2E-64  498.5  27.9  260   16-279   186-457 (689)
 12 4f9c_A Cell division cycle 7-r 100.0 7.3E-60 2.5E-64  469.7  27.3  255   16-277    18-358 (361)
 13 4g31_A Eukaryotic translation  100.0 9.6E-60 3.3E-64  457.1  24.3  255   18-278     4-286 (299)
 14 4asz_A BDNF/NT-3 growth factor 100.0 1.5E-59 5.2E-64  455.3  24.6  256   15-276     9-285 (299)
 15 3uto_A Twitchin; kinase, muscl 100.0 9.8E-59 3.4E-63  487.9  29.5  257   17-280   155-419 (573)
 16 4aoj_A High affinity nerve gro 100.0 1.4E-58 4.7E-63  454.4  27.6  252   17-272    39-313 (329)
 17 3omv_A RAF proto-oncogene seri 100.0 1.5E-58 5.3E-63  448.9  25.1  254   14-272    31-294 (307)
 18 4gt4_A Tyrosine-protein kinase 100.0 2.3E-58   8E-63  448.8  25.9  256   14-272    21-300 (308)
 19 3fe3_A MAP/microtubule affinit 100.0 1.1E-56 3.8E-61  441.8  31.8  260   16-279    12-272 (328)
 20 3zgw_A Maternal embryonic leuc 100.0 1.6E-56 5.6E-61  443.9  27.7  264   13-279     4-268 (347)
 21 4ase_A Vascular endothelial gr 100.0   2E-56   7E-61  442.7  22.8  254   16-272    61-341 (353)
 22 3txo_A PKC-L, NPKC-ETA, protei 100.0   1E-55 3.5E-60  439.3  26.8  263   14-279    18-288 (353)
 23 1o6l_A RAC-beta serine/threoni 100.0 5.9E-55   2E-59  431.1  29.4  260   17-279     3-268 (337)
 24 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-54 4.8E-59  425.1  29.0  258   16-279     3-266 (318)
 25 2yab_A Death-associated protei 100.0 3.5E-54 1.2E-58  429.4  32.3  263   12-278     5-279 (361)
 26 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.8E-56   2E-60  438.1  19.1  261   16-280     6-267 (336)
 27 1xjd_A Protein kinase C, theta 100.0 1.1E-54 3.8E-59  430.4  26.4  263   14-279    12-277 (345)
 28 4dc2_A Protein kinase C IOTA t 100.0 2.3E-54   8E-59  435.3  28.1  263   14-279    47-326 (396)
 29 1rdq_E PKA C-alpha, CAMP-depen 100.0   6E-54   2E-58  426.1  29.1  258   16-279    38-301 (350)
 30 2i0e_A Protein kinase C-beta I 100.0 4.2E-54 1.4E-58  427.6  27.6  262   14-278    15-283 (353)
 31 3a8x_A Protein kinase C IOTA t 100.0 1.4E-53 4.7E-58  422.7  30.6  261   16-279     6-283 (345)
 32 3fxz_A Serine/threonine-protei 100.0 1.5E-53 5.2E-58  413.3  29.1  258   17-280    18-278 (297)
 33 4fr4_A YANK1, serine/threonine 100.0 9.3E-54 3.2E-58  429.4  27.9  264   13-279     9-279 (384)
 34 2eue_A Carbon catabolite derep 100.0 5.9E-54   2E-58  410.6  24.5  262   14-279     8-270 (275)
 35 3uc3_A Serine/threonine-protei 100.0 2.2E-53 7.7E-58  423.7  28.8  273    1-280     1-283 (361)
 36 2r5t_A Serine/threonine-protei 100.0 1.8E-53 6.2E-58  426.1  28.2  263   14-279    33-301 (373)
 37 3tki_A Serine/threonine-protei 100.0   2E-53   7E-58  417.5  27.0  261   17-279     5-269 (323)
 38 3soa_A Calcium/calmodulin-depe 100.0 2.5E-53 8.4E-58  434.4  28.6  261   13-277     5-273 (444)
 39 1tki_A Titin; serine kinase, m 100.0   3E-53   1E-57  416.1  27.6  255   16-278     2-264 (321)
 40 3a62_A Ribosomal protein S6 ki 100.0 4.3E-53 1.5E-57  415.9  28.3  264   12-278    10-283 (327)
 41 2zv2_A Calcium/calmodulin-depe 100.0 2.1E-53 7.3E-58  411.7  25.7  261   14-276     8-297 (298)
 42 3hmm_A TGF-beta receptor type- 100.0   6E-54 2.1E-58  417.6  21.9  248   18-271     2-290 (303)
 43 3v8s_A RHO-associated protein  100.0 1.2E-53 4.1E-58  432.2  24.6  263   16-279    66-337 (410)
 44 2bdw_A Hypothetical protein K1 100.0 4.7E-53 1.6E-57  421.5  27.9  259   14-277    24-290 (362)
 45 2y0a_A Death-associated protei 100.0 1.1E-52 3.9E-57  412.7  30.2  262   13-278     5-278 (326)
 46 4ejn_A RAC-alpha serine/threon 100.0 3.9E-53 1.3E-57  433.5  25.9  261   15-278   144-411 (446)
 47 2h6d_A 5'-AMP-activated protei 100.0   1E-52 3.5E-57  401.8  26.1  266   12-280     4-270 (276)
 48 3o0g_A Cell division protein k 100.0 3.6E-52 1.2E-56  401.9  30.1  257   19-279     2-290 (292)
 49 3niz_A Rhodanese family protei 100.0 1.4E-52 4.8E-57  409.2  27.4  263   12-279    14-308 (311)
 50 3c0i_A Peripheral plasma membr 100.0 8.8E-53   3E-57  417.7  25.9  260   14-277    19-292 (351)
 51 3fdn_A Serine/threonine-protei 100.0 1.5E-52 5.2E-57  401.7  26.0  260   15-279     5-265 (279)
 52 4aw2_A Serine/threonine-protei 100.0 9.6E-53 3.3E-57  428.8  23.9  264   17-281    72-348 (437)
 53 3oz6_A Mitogen-activated prote 100.0 2.4E-52 8.3E-57  419.8  25.5  263   15-279     5-336 (388)
 54 2vgo_A Serine/threonine-protei 100.0 5.5E-52 1.9E-56  398.8  26.6  261   14-279     9-270 (284)
 55 3kk8_A Calcium/calmodulin depe 100.0 2.1E-51 7.2E-56  394.3  30.5  260   15-279     2-269 (284)
 56 1ob3_A PFPK5, cell division co 100.0 8.8E-52   3E-56  398.6  26.0  254   19-277     2-286 (288)
 57 2vd5_A DMPK protein; serine/th 100.0 3.5E-52 1.2E-56  421.8  24.1  263   16-280    58-336 (412)
 58 3gni_B Strad alpha; kinase fol 100.0 1.3E-51 4.5E-56  414.5  28.1  262   16-279    22-341 (389)
 59 3nyv_A Calmodulin-domain prote 100.0 4.3E-52 1.5E-56  430.0  25.2  261   13-278    20-288 (484)
 60 2a2a_A Death-associated protei 100.0 3.5E-51 1.2E-55  400.7  30.1  262   13-278     6-279 (321)
 61 2rku_A Serine/threonine-protei 100.0 4.4E-51 1.5E-55  394.5  30.3  263   16-281    12-275 (294)
 62 1kob_A Twitchin; kinase, intra 100.0 3.4E-51 1.1E-55  411.6  30.4  258   15-279    47-312 (387)
 63 3pfq_A PKC-B, PKC-beta, protei 100.0   1E-51 3.5E-56  443.0  28.2  261   16-279   338-605 (674)
 64 3f3z_A Calcium/calmodulin-depe 100.0 2.6E-51 8.7E-56  392.5  27.9  255   16-278     6-268 (277)
 65 3q5i_A Protein kinase; CDPK, m 100.0 2.9E-51 9.8E-56  426.1  30.4  261   15-280    32-310 (504)
 66 2owb_A Serine/threonine-protei 100.0 4.7E-51 1.6E-55  402.5  30.2  262   17-281    39-301 (335)
 67 2acx_A G protein-coupled recep 100.0 1.2E-51   4E-56  431.9  27.2  260   16-279   181-452 (576)
 68 2qr7_A Ribosomal protein S6 ki 100.0 9.8E-52 3.3E-56  408.9  25.1  253   15-277    18-283 (342)
 69 4agu_A Cyclin-dependent kinase 100.0 3.7E-51 1.3E-55  397.9  28.7  260   17-279     1-292 (311)
 70 2pmi_A Negative RE, cyclin-dep 100.0 1.2E-51   4E-56  403.6  25.2  258   18-280     4-302 (317)
 71 2ac3_A MAP kinase-interacting  100.0 4.5E-51 1.5E-55  398.2  29.2  262   14-279     7-303 (316)
 72 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.2E-51 3.9E-56  405.8  24.6  262   14-279    29-326 (329)
 73 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.7E-51 9.1E-56  427.7  28.3  261   16-279   182-456 (543)
 74 3cok_A Serine/threonine-protei 100.0 9.8E-52 3.3E-56  395.6  22.9  259   18-279    10-270 (278)
 75 3mwu_A Calmodulin-domain prote 100.0 1.8E-51 6.2E-56  425.7  26.5  261   14-280    17-285 (486)
 76 2c30_A Serine/threonine-protei 100.0 1.3E-50 4.3E-55  397.2  31.0  254   20-279    46-302 (321)
 77 2yex_A Serine/threonine-protei 100.0 4.9E-51 1.7E-55  389.8  26.9  261   17-279     5-269 (276)
 78 3g33_A Cell division protein k 100.0 4.5E-51 1.5E-55  397.2  27.1  261   14-279     4-304 (308)
 79 3ttj_A Mitogen-activated prote 100.0 1.8E-51   6E-56  423.2  25.5  257   16-279    59-363 (464)
 80 3lij_A Calcium/calmodulin depe 100.0 3.4E-51 1.2E-55  424.5  27.5  256   16-277    34-297 (494)
 81 1cm8_A Phosphorylated MAP kina 100.0 2.8E-51 9.5E-56  409.5  25.8  257   16-279    22-315 (367)
 82 2w4o_A Calcium/calmodulin-depe 100.0 7.1E-51 2.4E-55  403.8  28.2  256   15-279    49-313 (349)
 83 3kn6_A Ribosomal protein S6 ki 100.0   2E-51 6.9E-56  403.7  24.0  254   17-279     6-278 (325)
 84 3is5_A Calcium-dependent prote 100.0 1.1E-50 3.7E-55  390.6  28.0  257   14-277    17-284 (285)
 85 3hko_A Calcium/calmodulin-depe 100.0 2.9E-51   1E-55  404.5  24.1  264   16-279    23-338 (345)
 86 3mi9_A Cell division protein k 100.0   1E-50 3.5E-55  402.1  28.1  263   16-280    14-320 (351)
 87 3n9x_A Phosphotransferase; mal 100.0 2.5E-50 8.7E-55  411.1  31.4  264   15-280    22-370 (432)
 88 3llt_A Serine/threonine kinase 100.0   1E-50 3.4E-55  403.4  27.8  253   13-276    29-360 (360)
 89 3rp9_A Mitogen-activated prote 100.0 6.6E-51 2.2E-55  418.3  26.8  262   16-279    50-404 (458)
 90 3dls_A PAS domain-containing s 100.0 1.6E-51 5.6E-56  406.1  21.5  255   16-279    21-282 (335)
 91 3qyz_A Mitogen-activated prote 100.0 1.6E-50 5.4E-55  403.2  28.4  260   17-279    25-321 (364)
 92 2wtk_C Serine/threonine-protei 100.0 4.6E-51 1.6E-55  396.0  23.0  264   16-280     2-272 (305)
 93 4eqm_A Protein kinase; transfe 100.0 2.7E-50 9.2E-55  389.8  27.9  263   12-276     4-272 (294)
 94 3ork_A Serine/threonine protei 100.0 2.1E-51 7.2E-56  400.5  20.1  265   12-277     5-279 (311)
 95 2x4f_A Myosin light chain kina 100.0 1.4E-50 4.7E-55  405.3  26.3  255   17-278    85-349 (373)
 96 1nxk_A MAP kinase-activated pr 100.0 1.4E-50 4.7E-55  409.0  26.6  252   16-279    58-329 (400)
 97 3bhy_A Death-associated protei 100.0 2.9E-50   1E-54  386.1  27.1  259   16-278     2-272 (283)
 98 1x8b_A WEE1HU, WEE1-like prote 100.0 4.1E-50 1.4E-54  384.8  27.9  257   13-279     5-287 (289)
 99 2jam_A Calcium/calmodulin-depe 100.0 1.7E-50   6E-55  392.4  25.5  256   15-278     5-268 (304)
100 2y7j_A Phosphorylase B kinase  100.0 4.8E-50 1.7E-54  400.1  29.1  258   17-277    92-365 (365)
101 3mtl_A Cell division protein k 100.0 7.4E-51 2.5E-55  399.2  22.7  256   19-279     2-289 (324)
102 4aaa_A Cyclin-dependent kinase 100.0 1.6E-50 5.6E-55  397.6  24.5  261   15-278    21-313 (331)
103 1phk_A Phosphorylase kinase; g 100.0 9.3E-50 3.2E-54  385.5  29.3  265   12-279    10-291 (298)
104 3lm5_A Serine/threonine-protei 100.0 4.9E-50 1.7E-54  393.8  26.9  263   14-281    23-297 (327)
105 3p1a_A MYT1 kinase, membrane-a 100.0 3.9E-50 1.3E-54  391.8  25.4  254   14-277    52-310 (311)
106 1u5q_A Serine/threonine protei 100.0 9.2E-50 3.2E-54  395.7  28.4  257   18-281    53-315 (348)
107 3a7i_A MST3 kinase, serine/thr 100.0 1.4E-49 4.7E-54  385.6  28.9  275    1-280     1-279 (303)
108 3dbq_A Dual specificity protei 100.0 5.9E-50   2E-54  395.8  26.5  260   16-279     6-281 (343)
109 3qd2_B Eukaryotic translation  100.0 1.9E-50 6.6E-55  395.4  22.4  257   16-277     3-331 (332)
110 1ua2_A CAK, cell division prot 100.0 2.6E-50 8.8E-55  398.9  23.5  260   17-279     8-299 (346)
111 2zmd_A Dual specificity protei 100.0 5.9E-50   2E-54  403.1  26.5  259   17-279    54-328 (390)
112 2fst_X Mitogen-activated prote 100.0 2.5E-50 8.6E-55  402.6  23.1  257   16-279    26-319 (367)
113 2r3i_A Cell division protein k 100.0 1.5E-49 5.1E-54  384.2  27.4  259   18-280     2-292 (299)
114 3i6u_A CDS1, serine/threonine- 100.0 4.5E-50 1.5E-54  407.7  24.9  261   14-278   130-406 (419)
115 1t4h_A Serine/threonine-protei 100.0 2.7E-49 9.3E-54  381.2  28.9  254   17-277    24-288 (290)
116 3kvw_A DYRK2, dual specificity 100.0 1.5E-49   5E-54  405.1  28.4  256   14-280    92-417 (429)
117 2xrw_A Mitogen-activated prote 100.0 7.7E-50 2.6E-54  399.4  24.8  257   16-279    22-326 (371)
118 3eqc_A Dual specificity mitoge 100.0   9E-50 3.1E-54  396.7  24.9  259   14-279    28-332 (360)
119 3eb0_A Putative uncharacterize 100.0 1.3E-49 4.6E-54  399.3  26.3  252   16-278     4-328 (383)
120 2i6l_A Mitogen-activated prote 100.0 1.8E-49 6.1E-54  386.6  25.9  263   13-279     5-313 (320)
121 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-49   4E-54  395.8  24.9  260   18-278    53-328 (355)
122 2b9h_A MAP kinase FUS3, mitoge 100.0 3.2E-49 1.1E-53  391.1  27.9  263   14-279     6-313 (353)
123 2w5a_A Serine/threonine-protei 100.0 1.3E-49 4.5E-54  380.8  23.6  259   17-279     4-275 (279)
124 2pml_X PFPK7, Ser/Thr protein  100.0   5E-50 1.7E-54  396.1  21.2  259   14-278    26-329 (348)
125 2j7t_A Serine/threonine-protei 100.0 2.6E-49 8.9E-54  383.0  25.5  260   15-279    15-283 (302)
126 3p86_A Serine/threonine-protei 100.0   3E-49   1E-53  385.5  26.1  258   14-277    32-299 (309)
127 3nsz_A CK II alpha, casein kin 100.0 5.9E-49   2E-53  385.6  28.1  252   17-279    34-327 (330)
128 2wei_A Calmodulin-domain prote 100.0 2.5E-49 8.6E-54  381.1  24.9  259   14-278    17-283 (287)
129 2ycf_A Serine/threonine-protei 100.0 1.7E-49 5.9E-54  388.6  24.0  261   14-278     5-281 (322)
130 3fme_A Dual specificity mitoge 100.0 2.2E-49 7.4E-54  381.1  24.1  258   15-277     3-272 (290)
131 3qup_A Tyrosine-protein kinase 100.0 1.7E-49 5.7E-54  388.5  23.5  268   12-281    16-308 (323)
132 2vwi_A Serine/threonine-protei 100.0 5.3E-50 1.8E-54  387.6  19.6  267   11-279     7-295 (303)
133 2x7f_A TRAF2 and NCK-interacti 100.0 8.8E-49   3E-53  383.7  27.4  259   15-279    20-294 (326)
134 4e7w_A Glycogen synthase kinas 100.0 2.5E-49 8.7E-54  399.0  24.1  255   14-279    35-329 (394)
135 3byv_A Rhoptry kinase; malaria 100.0 7.3E-51 2.5E-55  407.6  12.7  248   18-277    72-365 (377)
136 3com_A Serine/threonine-protei 100.0 1.6E-48 5.4E-53  379.9  28.7  258   15-280    25-287 (314)
137 2psq_A Fibroblast growth facto 100.0 7.4E-49 2.5E-53  392.3  27.0  255   15-272    77-358 (370)
138 3e3p_A Protein kinase, putativ 100.0   2E-49 6.7E-54  393.6  22.3  260   12-279    16-322 (360)
139 4exu_A Mitogen-activated prote 100.0 5.8E-49   2E-53  393.1  25.8  256   16-279    39-331 (371)
140 1j1b_A Glycogen synthase kinas 100.0 8.4E-49 2.9E-53  398.4  27.3  251   17-278    52-343 (420)
141 4euu_A Serine/threonine-protei 100.0 2.3E-49   8E-54  387.2  22.1  256   14-274     4-305 (319)
142 3l9p_A Anaplastic lymphoma kin 100.0 2.5E-49 8.7E-54  395.2  22.3  259   15-276    67-343 (367)
143 1z57_A Dual specificity protei 100.0 8.2E-49 2.8E-53  384.6  24.9  256   12-278     7-335 (339)
144 3rgf_A Cyclin-dependent kinase 100.0 2.6E-49 8.9E-54  400.1  20.9  259   16-280    17-342 (405)
145 4hcu_A Tyrosine-protein kinase 100.0 1.7E-48 5.7E-53  371.6  25.2  252   14-272     5-260 (269)
146 3kul_A Ephrin type-A receptor  100.0 1.9E-48 6.5E-53  382.4  26.1  255   14-271    44-306 (325)
147 3coi_A Mitogen-activated prote 100.0 2.1E-48 7.1E-53  386.0  26.4  255   16-278    21-312 (353)
148 3fhr_A MAP kinase-activated pr 100.0   7E-49 2.4E-53  387.3  22.5  263    4-278    13-294 (336)
149 3a99_A Proto-oncogene serine/t 100.0 4.4E-49 1.5E-53  385.9  20.9  256   14-279    38-301 (320)
150 3pg1_A Mitogen-activated prote 100.0   1E-48 3.6E-53  389.1  23.9  261   15-280    18-325 (362)
151 1zy4_A Serine/threonine-protei 100.0 1.6E-48 5.4E-53  376.6  24.1  255   17-278     4-290 (303)
152 2clq_A Mitogen-activated prote 100.0 3.7E-48 1.3E-52  373.5  26.3  254   21-279    24-286 (295)
153 1wak_A Serine/threonine-protei 100.0 7.8E-49 2.7E-53  393.7  22.3  252   14-276    32-396 (397)
154 3tt0_A Basic fibroblast growth 100.0 5.2E-48 1.8E-52  387.7  28.2  258   12-272    62-346 (382)
155 3gen_A Tyrosine-protein kinase 100.0 3.7E-48 1.3E-52  371.7  25.7  256   10-272    15-274 (283)
156 1luf_A Muscle-specific tyrosin 100.0 2.4E-48 8.3E-53  383.0  24.9  255   15-272    43-329 (343)
157 2iwi_A Serine/threonine-protei 100.0   6E-49   2E-53  382.7  20.3  257   14-280    26-292 (312)
158 3q60_A ROP5B; pseudokinase, tr 100.0 4.4E-49 1.5E-53  393.7  17.5  253   19-278    62-359 (371)
159 3an0_A Dual specificity mitoge 100.0 4.1E-48 1.4E-52  381.6  24.2  259   15-279    47-318 (340)
160 1blx_A Cyclin-dependent kinase 100.0 1.3E-47 4.4E-52  375.2  27.5  259   15-279     7-304 (326)
161 2vx3_A Dual specificity tyrosi 100.0 5.5E-48 1.9E-52  387.4  25.5  254   14-278    49-379 (382)
162 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-48 8.3E-53  389.4  22.8  256   13-271   108-367 (377)
163 3vhe_A Vascular endothelial gr 100.0 1.5E-48   5E-53  387.2  20.7  255   15-272    18-349 (359)
164 2ivs_A Proto-oncogene tyrosine 100.0 4.1E-48 1.4E-52  376.5  23.1  257   13-272    17-305 (314)
165 2eu9_A Dual specificity protei 100.0 8.4E-48 2.9E-52  380.2  25.4  255   13-278    13-340 (355)
166 3lb7_A RAF proto-oncogene seri 100.0 9.4E-48 3.2E-52  374.5  25.0  259   11-275    28-297 (307)
167 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.2E-47 4.3E-52  365.1  25.1  251   15-272     4-258 (268)
168 3dtc_A Mitogen-activated prote 100.0 1.6E-47 5.5E-52  364.7  25.5  250   16-272     4-267 (271)
169 1p4o_A Insulin-like growth fac 100.0 1.7E-47 5.8E-52  373.9  25.8  257   13-272    19-293 (322)
170 3s95_A LIMK-1, LIM domain kina 100.0 7.2E-48 2.5E-52  375.0  23.1  250   16-271     7-275 (310)
171 2h34_A Serine/threonine-protei 100.0   3E-47   1E-51  370.9  27.0  257   13-271    28-289 (309)
172 2yfx_A Tyrosine-protein kinase 100.0 4.3E-48 1.5E-52  379.6  20.9  262   12-276    23-302 (327)
173 1csn_A Casein kinase-1; phosph 100.0   3E-47   1E-51  367.6  26.2  253   13-272     4-277 (298)
174 2izr_A Casein kinase I isoform 100.0 6.9E-48 2.4E-52  378.7  21.8  249   15-271     5-274 (330)
175 1mp8_A Focal adhesion kinase 1 100.0 1.2E-47 4.2E-52  368.1  23.0  255   13-272     9-270 (281)
176 3poz_A Epidermal growth factor 100.0 9.9E-48 3.4E-52  377.4  22.9  254   15-272    11-272 (327)
177 3kex_A Receptor tyrosine-prote 100.0 6.2E-48 2.1E-52  378.4  21.3  254   15-272     9-270 (325)
178 4fvq_A Tyrosine-protein kinase 100.0   9E-48 3.1E-52  369.9  22.0  248   15-272     4-269 (289)
179 3ugc_A Tyrosine-protein kinase 100.0 1.2E-47 4.2E-52  370.5  22.8  256   12-271     3-284 (295)
180 2pvf_A Fibroblast growth facto 100.0 2.8E-47 9.7E-52  375.0  25.8  258   12-272    28-312 (334)
181 3cek_A Dual specificity protei 100.0 2.9E-47 9.9E-52  371.2  24.9  261   15-279    24-300 (313)
182 1rjb_A FL cytokine receptor; k 100.0 1.2E-47 4.2E-52  378.5  22.6  258   14-274    40-330 (344)
183 4f0f_A Serine/threonine-protei 100.0 4.3E-47 1.5E-51  365.0  25.6  256    9-271     9-282 (287)
184 3soc_A Activin receptor type-2 100.0 1.3E-47 4.5E-52  375.7  22.3  251   15-271    20-311 (322)
185 1q8y_A SR protein kinase; tran 100.0 8.7E-48   3E-52  383.4  21.3  254   15-279    15-341 (373)
186 1t46_A HOMO sapiens V-KIT hard 100.0 1.2E-47 4.2E-52  372.9  21.8  257   13-272    17-301 (313)
187 3kfa_A Tyrosine-protein kinase 100.0 3.3E-47 1.1E-51  365.8  24.0  254   12-271     6-264 (288)
188 3lzb_A Epidermal growth factor 100.0 1.9E-47 6.4E-52  375.6  22.6  254   15-272    11-272 (327)
189 3kmu_A ILK, integrin-linked ki 100.0 4.6E-47 1.6E-51  360.8  23.5  248   14-271     5-263 (271)
190 1fvr_A Tyrosine-protein kinase 100.0 5.1E-47 1.8E-51  371.9  24.5  254   13-272    19-294 (327)
191 2dyl_A Dual specificity mitoge 100.0 8.2E-47 2.8E-51  367.9  25.5  257   16-277    22-289 (318)
192 3og7_A AKAP9-BRAF fusion prote 100.0 3.5E-47 1.2E-51  366.6  22.6  256   10-271    15-281 (289)
193 3t9t_A Tyrosine-protein kinase 100.0 7.2E-47 2.5E-51  359.2  24.3  250   16-272     5-258 (267)
194 1u59_A Tyrosine-protein kinase 100.0 1.3E-46 4.4E-51  362.1  25.2  255   16-274     6-268 (287)
195 4e5w_A Tyrosine-protein kinase 100.0 9.2E-47 3.1E-51  365.1  24.2  257   12-271    14-295 (302)
196 3aln_A Dual specificity mitoge 100.0 1.6E-47 5.5E-52  375.3  18.8  258   14-278    17-292 (327)
197 2i1m_A Macrophage colony-stimu 100.0 6.5E-47 2.2E-51  371.7  22.7  256   14-272    41-320 (333)
198 1mqb_A Ephrin type-A receptor  100.0 2.6E-46 8.9E-51  368.3  27.0  256   14-272    39-303 (333)
199 3lxp_A Non-receptor tyrosine-p 100.0 6.7E-47 2.3E-51  369.9  22.6  257   12-271    23-303 (318)
200 2wqm_A Serine/threonine-protei 100.0 5.4E-46 1.8E-50  361.5  28.4  254   16-272    29-291 (310)
201 2a19_B Interferon-induced, dou 100.0 8.1E-47 2.8E-51  361.8  22.0  252   11-277     3-273 (284)
202 3brb_A Proto-oncogene tyrosine 100.0 1.3E-46 4.4E-51  366.4  23.6  255   16-272    31-302 (313)
203 1byg_A CSK, protein (C-termina 100.0 8.9E-47   3E-51  361.4  21.9  258    1-271     1-266 (278)
204 2xir_A Vascular endothelial gr 100.0 4.6E-47 1.6E-51  369.4  20.0  255   15-272    23-304 (316)
205 2qol_A Ephrin receptor; recept 100.0 1.2E-46   4E-51  376.8  23.2  254   15-271    41-302 (373)
206 1xbb_A Tyrosine-protein kinase 100.0 2.4E-46 8.4E-51  360.9  24.4  253   16-271    13-272 (291)
207 1qcf_A Haematopoetic cell kina 100.0 4.7E-46 1.6E-50  381.9  27.1  250   14-271   183-437 (454)
208 3p23_A Serine/threonine-protei 100.0 1.1E-46 3.7E-51  384.2  21.9  270    1-278     1-290 (432)
209 3cc6_A Protein tyrosine kinase 100.0 3.5E-46 1.2E-50  357.8  24.1  255   13-272     6-267 (281)
210 3uzp_A CKI-delta, CKID, casein 100.0 4.3E-46 1.5E-50  359.2  24.9  250   15-271     5-273 (296)
211 1k9a_A Carboxyl-terminal SRC k 100.0 5.8E-46   2E-50  380.8  27.2  244   15-271   189-438 (450)
212 1qpc_A LCK kinase; alpha beta  100.0 7.6E-46 2.6E-50  354.9  25.9  251   13-271     7-262 (279)
213 2qkw_B Protein kinase; three-h 100.0 3.1E-47 1.1E-51  372.4  16.4  253   16-273    36-310 (321)
214 1opk_A P150, C-ABL, proto-onco 100.0 2.3E-46   8E-51  388.2  23.2  252   14-271   215-471 (495)
215 4hgt_A Casein kinase I isoform 100.0 3.5E-46 1.2E-50  359.5  22.7  250   15-271     5-273 (296)
216 1u46_A ACK-1, activated CDC42  100.0 1.5E-46 5.1E-51  361.5  20.0  255   15-271    14-277 (291)
217 4eut_A Serine/threonine-protei 100.0 8.2E-47 2.8E-51  380.8  18.9  254   14-272     4-303 (396)
218 3pls_A Macrophage-stimulating  100.0 1.3E-45 4.4E-50  356.2  25.6  250   19-271    21-280 (298)
219 3f66_A Hepatocyte growth facto 100.0 7.6E-46 2.6E-50  358.3  23.9  251   18-271    24-284 (298)
220 3q4u_A Activin receptor type-1 100.0 1.6E-45 5.4E-50  356.1  25.8  250   14-271     3-295 (301)
221 2v62_A Serine/threonine-protei 100.0 4.1E-46 1.4E-50  368.6  22.0  253   17-271    35-321 (345)
222 3lxl_A Tyrosine-protein kinase 100.0 4.9E-46 1.7E-50  364.9  22.2  259   10-272    13-297 (327)
223 2buj_A Serine/threonine-protei 100.0   2E-46 6.9E-51  365.5  18.7  253   17-272    27-300 (317)
224 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-45 4.4E-50  378.5  25.5  251   13-271   178-433 (452)
225 3ll6_A Cyclin G-associated kin 100.0 4.3E-46 1.5E-50  365.3  20.3  250   18-274    27-304 (337)
226 2rio_A Serine/threonine-protei 100.0 1.3E-45 4.6E-50  376.4  24.6  255   14-278    10-302 (434)
227 3op5_A Serine/threonine-protei 100.0 5.4E-46 1.8E-50  370.4  21.0  252   18-271    34-322 (364)
228 3m2w_A MAP kinase-activated pr 100.0 3.1E-45 1.1E-49  354.9  24.7  234   13-279    11-264 (299)
229 3mdy_A Bone morphogenetic prot 100.0 9.7E-46 3.3E-50  363.3  20.6  251   14-272    32-325 (337)
230 2jii_A Serine/threonine-protei 100.0 2.8E-45 9.4E-50  363.5  21.9  244   18-271    41-329 (352)
231 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.5E-45 5.2E-50  367.2  19.8  246   16-272    62-332 (365)
232 3c1x_A Hepatocyte growth facto 100.0 1.9E-45 6.3E-50  368.1  20.0  250   20-272    90-349 (373)
233 2nru_A Interleukin-1 receptor- 100.0 1.2E-45 4.3E-50  358.3  18.1  248   21-272    33-300 (307)
234 2ozo_A Tyrosine-protein kinase 100.0 1.6E-44 5.6E-49  383.4  28.2  251   17-271   333-591 (613)
235 2eva_A TAK1 kinase - TAB1 chim 100.0 7.8E-45 2.7E-49  353.6  23.5  241   17-272     6-257 (307)
236 2h8h_A Proto-oncogene tyrosine 100.0 7.1E-45 2.4E-49  380.5  24.2  253   12-272   260-517 (535)
237 3uim_A Brassinosteroid insensi 100.0 1.3E-45 4.6E-50  361.3  17.5  254   16-274    27-307 (326)
238 4fl3_A Tyrosine-protein kinase 100.0 2.2E-44 7.4E-49  383.6  27.6  248   21-271   370-624 (635)
239 2w1i_A JAK2; chromosomal rearr 100.0 7.6E-45 2.6E-49  356.4  21.5  255   13-271    35-315 (326)
240 3g2f_A Bone morphogenetic prot 100.0 6.4E-45 2.2E-49  357.7  20.6  258   14-279     8-325 (336)
241 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.5E-45 8.6E-50  357.8  17.4  254   13-271    27-295 (319)
242 1b6c_B TGF-B superfamily recep 100.0 1.1E-44 3.8E-49  356.7  22.0  250   15-272    38-330 (342)
243 2vuw_A Serine/threonine-protei 100.0 9.5E-47 3.3E-51  371.5   4.8  245   16-276    17-336 (336)
244 3sv0_A Casein kinase I-like; t 100.0   6E-44   2E-48  368.2  25.9  250   15-271     3-271 (483)
245 3dzo_A Rhoptry kinase domain;  100.0 3.6E-45 1.2E-49  370.9  14.5  247   20-278    79-370 (413)
246 2j0j_A Focal adhesion kinase 1 100.0 9.9E-44 3.4E-48  379.9  25.7  252   15-271   386-644 (656)
247 3qa8_A MGC80376 protein; kinas 100.0 1.2E-45 3.9E-50  390.7   9.6  258   14-277     9-303 (676)
248 3gxj_A TGF-beta receptor type- 100.0 6.4E-46 2.2E-50  358.9   6.4  247   17-271     1-290 (303)
249 3uqc_A Probable conserved tran 100.0 7.6E-44 2.6E-48  343.6  20.3  228   13-272    24-259 (286)
250 2pzi_A Probable serine/threoni 100.0 1.1E-43 3.7E-48  382.0  14.9  243   14-276    75-325 (681)
251 4azs_A Methyltransferase WBDD; 100.0 1.2E-36 4.3E-41  319.7   7.0  230   26-275   241-479 (569)
252 2ehb_D CBL-interacting serine/ 100.0 1.8E-34   6E-39  244.9   9.6  131  299-430     3-133 (143)
253 2zfd_B Putative uncharacterize 100.0 2.3E-32   8E-37  226.3   7.8  122  299-424     2-123 (123)
254 3en9_A Glycoprotease, O-sialog 100.0 4.3E-30 1.5E-34  268.4  10.0  189   22-222   339-539 (540)
255 1zar_A RIO2 kinase; serine kin  99.9   7E-27 2.4E-31  224.5  12.1  148   20-194    91-253 (282)
256 1zth_A RIO1 serine protein kin  99.9 8.5E-23 2.9E-27  193.4  11.2  139   21-167    49-218 (258)
257 4gyi_A RIO2 kinase; protein ki  99.8 1.1E-20 3.7E-25  187.4   4.5  138   21-166    97-263 (397)
258 3tm0_A Aminoglycoside 3'-phosp  99.5 1.7E-13 5.7E-18  129.1  12.4  140   18-166    13-212 (263)
259 1nd4_A Aminoglycoside 3'-phosp  99.4 1.9E-12 6.4E-17  121.2   9.8  135   18-166    19-213 (264)
260 3dxp_A Putative acyl-COA dehyd  99.3 1.1E-11 3.7E-16  122.3  10.6  140   23-167    42-248 (359)
261 3sg8_A APH(2'')-ID; antibiotic  99.2 8.6E-12   3E-16  120.2   4.8  181   24-221    25-287 (304)
262 3ose_A Serine/threonine-protei  99.0 2.2E-09 7.5E-14   88.2  10.5   86  333-419    32-119 (120)
263 3r70_A Aminoglycoside phosphot  98.9   7E-09 2.4E-13  100.6  12.3  134   20-168    38-238 (320)
264 3tdw_A Gentamicin resistance p  98.7 1.3E-07 4.5E-12   91.0  14.9  133   24-167    24-224 (306)
265 4gkh_A Aminoglycoside 3'-phosp  98.7 2.6E-07 8.9E-12   86.8  14.4  131   28-167    33-223 (272)
266 3ovc_A Hygromycin-B 4-O-kinase  98.5 3.5E-07 1.2E-11   90.2  11.8   77   21-107    43-122 (362)
267 2olc_A MTR kinase, methylthior  98.4 5.5E-07 1.9E-11   89.7   9.5   80   24-105    35-121 (397)
268 1v5s_A MAP/microtubule affinit  98.4 4.6E-07 1.6E-11   74.3   7.3   85  334-419    33-119 (126)
269 3d1u_A Putative fructosamine-3  98.4 1.8E-06   6E-11   82.4  12.3   78   21-106    17-97  (288)
270 3ats_A Putative uncharacterize  98.4 5.3E-07 1.8E-11   88.3   8.3   86   22-107    23-121 (357)
271 4eai_A 5'-AMP-activated protei  98.4   2E-06 6.9E-11   68.1   9.6   88  330-418     8-104 (106)
272 2q83_A YTAA protein; 2635576,   98.3 4.8E-06 1.7E-10   80.5  12.7  134   24-166    37-251 (346)
273 2v8q_A 5'-AMP-activated protei  98.2 1.3E-05 4.4E-10   67.2  10.2   75  331-405     6-81  (157)
274 2y8l_A 5'-AMP-activated protei  98.1 2.1E-05   7E-10   66.9  10.3   77  329-405    18-95  (173)
275 4eag_A EG:132E8.2 protein; AMP  98.0 4.7E-05 1.6E-09   61.9  10.1   78  330-407     8-86  (130)
276 3jr1_A Putative fructosamine-3  97.9 9.2E-05 3.1E-09   71.2  13.1   75   24-106    41-118 (312)
277 2qrd_A SNF1-like protein kinas  97.9 1.5E-05 5.2E-10   66.2   6.4   90  329-419    12-135 (137)
278 2pyw_A Uncharacterized protein  97.9 4.8E-05 1.6E-09   76.3  10.5   32  135-167   230-261 (420)
279 2yle_A Protein spire homolog 1  97.8 0.00025 8.7E-09   63.8  12.1  120  105-258    34-156 (229)
280 3csv_A Aminoglycoside phosphot  97.7  0.0001 3.5E-09   71.2   9.3  134   25-167    24-217 (333)
281 3dxq_A Choline/ethanolamine ki  97.7 0.00011 3.6E-09   70.1   8.5  131   24-167    23-202 (301)
282 2ppq_A HSK, HK, homoserine kin  97.6 0.00024 8.3E-09   68.0  10.7  136   24-166    27-216 (322)
283 1nw1_A Choline kinase (49.2 KD  97.6 0.00028 9.5E-09   71.0  10.4   74   24-106    78-159 (429)
284 3feg_A Choline/ethanolamine ki  97.5 0.00032 1.1E-08   69.3   9.4  134   25-166    56-253 (379)
285 3t4n_A Carbon catabolite-derep  97.4 0.00057 1.9E-08   58.7   8.9   89  329-419    50-173 (179)
286 3c5i_A Choline kinase; choline  97.4 0.00043 1.5E-08   67.9   9.2   75   24-106    38-121 (369)
287 1zyl_A Hypothetical protein YI  97.4 0.00079 2.7E-08   64.6  10.5  134   25-166    32-222 (328)
288 3f7w_A Putative fructosamine-3  97.3  0.0014 4.8E-08   61.8  11.8   79   19-105    15-96  (288)
289 2qg7_A Ethanolamine kinase PV0  97.3  0.0021 7.3E-08   65.0  13.2   75   24-106   113-188 (458)
290 3i1a_A Spectinomycin phosphotr  97.2  0.0022 7.4E-08   62.2  11.1   31  137-167   206-236 (339)
291 3f2s_A CK, chetk-alpha, cholin  96.7  0.0077 2.6E-07   59.7  10.5  142   20-166    54-279 (401)
292 3mes_A Choline kinase; malaria  96.4  0.0094 3.2E-07   59.6   9.0   75   24-106    75-157 (424)
293 3g15_A CK, chetk-alpha, cholin  94.5    0.24 8.1E-06   48.8  11.3   30  138-167   245-280 (401)
294 4ano_A ESSB; membrane protein,  86.8     2.4 8.3E-05   37.9   8.5   82   77-164    48-130 (219)
295 4ann_A ESSB; membrane protein,  86.4     1.7 5.9E-05   38.7   7.2   85   76-165    42-126 (215)
296 3cxl_A N-chimerin; SH2, RHO-GA  83.7   0.078 2.7E-06   53.5  -3.2   64   22-89    145-214 (463)
297 3ls8_A Phosphatidylinositol 3-  68.8      85  0.0029   32.4  14.3   81   82-165   402-500 (614)
298 2x6h_A GH13170P, VPS34, phosph  67.9      60   0.002   34.1  13.2   24  142-165   551-574 (696)
299 1cja_A Protein (actin-fragmin   40.6      78  0.0027   30.0   7.7  136   21-167    71-237 (342)
300 2y3a_A Phosphatidylinositol-4,  33.6      60   0.002   36.0   6.5   24  142-165   940-963 (1092)
301 1e7u_A Phosphatidylinositol 3-  30.0      58   0.002   35.6   5.6   28  137-166   801-828 (961)
302 2wxf_A Phosphatidylinositol-4,  29.1      55  0.0019   35.7   5.3   24  142-165   788-811 (940)
303 3hhm_A Phosphatidylinositol-4,  25.1      87   0.003   34.6   5.9   27  137-165   934-960 (1091)
304 3oja_A Leucine-rich immune mol  20.5     3.7 0.00013   41.2  -5.6   28   63-90    323-350 (487)

No 1  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=2.3e-69  Score=524.35  Aligned_cols=262  Identities=33%  Similarity=0.621  Sum_probs=243.8

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      ..++|++++.||+|+||+||+|++..+|+.||||++.+.........+.+.+|+.+|+.|+|||||++++++.+.+.+|+
T Consensus        30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            44679999999999999999999999999999999987765555567889999999999999999999999999999999


Q ss_pred             EEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522           97 AMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      |||||+||+|++++.+ +.+++..++.|+.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.........
T Consensus       110 vmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~  189 (311)
T 4aw0_A          110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA  189 (311)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence            9999999999999976 889999999999999999999999999999999999999999999999999998765444455


Q ss_pred             cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 013522          176 LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKL  255 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~  255 (441)
                      ...+.||||.|||||++.+.+|+ .++|||||||+||+|++|++||.+.+...++.+|.++.+.+|..+++++++||.+|
T Consensus       190 ~~~~~~GTp~YmAPEvl~~~~y~-~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~l  268 (311)
T 4aw0_A          190 RANSFVGTAQYVSPELLTEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKL  268 (311)
T ss_dssp             CBCCCCSCGGGCCHHHHHHSCBC-HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHH
T ss_pred             cccCcccCcccCCHHHHcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHHH
Confidence            66788999999999999988884 89999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCHHH------HhcCcccCccC
Q 013522          256 LDPNPNSRIAISK------IMESSWFKKSA  279 (441)
Q Consensus       256 L~~dP~~R~t~~e------il~hpwf~~~~  279 (441)
                      |++||++|||++|      |++||||+...
T Consensus       269 L~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          269 LVLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             SCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             ccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence            9999999999988      58999998654


No 2  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.9e-68  Score=510.67  Aligned_cols=258  Identities=45%  Similarity=0.829  Sum_probs=223.5

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      .++|++++.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+|+.++|||||++++++.+++.+|+|
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            48999999999999999999999999999999999887665555677899999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCc
Q 013522           98 MDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGL  176 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~  176 (441)
                      |||| +|+|.+++.. +++++.+++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+....   ...
T Consensus        92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~---~~~  167 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNF  167 (275)
T ss_dssp             EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----------
T ss_pred             EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC---CCc
Confidence            9999 6799999865 7899999999999999999999999999999999999999999999999999976432   334


Q ss_pred             ccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 013522          177 LHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLL  256 (441)
Q Consensus       177 ~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L  256 (441)
                      ..+.+|||.|+|||++.+.+|++.++|||||||++|+|++|++||.+.+...++..+..+.+++|.++|+++++||.+||
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  247 (275)
T 3hyh_A          168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML  247 (275)
T ss_dssp             -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHS
T ss_pred             cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHc
Confidence            56789999999999999988888899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCHHHHhcCcccCccC
Q 013522          257 DPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       257 ~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ++||++|||++|+++||||+...
T Consensus       248 ~~dP~~R~s~~eil~hpw~k~~~  270 (275)
T 3hyh_A          248 IVNPLNRISIHEIMQDDWFKVDL  270 (275)
T ss_dssp             CSSGGGSCCHHHHHHCHHHHTTC
T ss_pred             cCChhHCcCHHHHHcCcccccCC
Confidence            99999999999999999998654


No 3  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.5e-66  Score=511.70  Aligned_cols=258  Identities=25%  Similarity=0.455  Sum_probs=233.6

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      ..+|++++.||+|+||+||+|++..+|+.||||++.+.....   .+.+.+|+.+|+.++|||||++++++.+++.+|||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv  149 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV  149 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS---GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH---HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            356999999999999999999999999999999998654332   35678999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCcc
Q 013522           98 MDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLL  177 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~  177 (441)
                      ||||+||+|.+++..+++++..++.|+.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....  .....
T Consensus       150 mEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~--~~~~~  227 (346)
T 4fih_A          150 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRR  227 (346)
T ss_dssp             ECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS--SSCCB
T ss_pred             EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCC--CCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999986432  23445


Q ss_pred             cccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC---CCCCCCCHHHHHHHHH
Q 013522          178 HTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF---KCPPWFSSEARRLITK  254 (441)
Q Consensus       178 ~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~  254 (441)
                      .+.||||.|||||++.+.+| +.++|||||||++|+|++|++||.+.+....+..+..+..   +.+..+|+++++||.+
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y-~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~  306 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR  306 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred             cccccCcCcCCHHHHCCCCC-CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence            67899999999999988888 4899999999999999999999999999988888877643   2334589999999999


Q ss_pred             hcCCCCCCCCCHHHHhcCcccCccCCc
Q 013522          255 LLDPNPNSRIAISKIMESSWFKKSAPK  281 (441)
Q Consensus       255 ~L~~dP~~R~t~~eil~hpwf~~~~~~  281 (441)
                      ||+.||++|||++|+|+||||++..++
T Consensus       307 ~L~~dP~~R~ta~e~l~Hp~~~~~~~p  333 (346)
T 4fih_A          307 LLVRDPAQRATAAELLKHPFLAKAGPP  333 (346)
T ss_dssp             HSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence            999999999999999999999876543


No 4  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.4e-66  Score=512.77  Aligned_cols=259  Identities=29%  Similarity=0.560  Sum_probs=229.6

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      .++|++++.||+|+||+||+|++..+|+.||||++.+.... ....+.+.+|+.+|+.|+|||||++++++.+.+.+|||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV  101 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV  101 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC-HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence            47999999999999999999999999999999999876643 34567899999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccC
Q 013522           98 MDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQD  174 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~  174 (441)
                      ||||+||+|++++..   ..+++..++.|+.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.....  .
T Consensus       102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--~  179 (350)
T 4b9d_A          102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--V  179 (350)
T ss_dssp             EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH--H
T ss_pred             EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC--c
Confidence            999999999999964   35799999999999999999999999999999999999999999999999999865431  1


Q ss_pred             CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC-CCCCCCCHHHHHHHH
Q 013522          175 GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF-KCPPWFSSEARRLIT  253 (441)
Q Consensus       175 ~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~  253 (441)
                      ....+.||||.|||||++.+.+|+ .++|||||||+||+|++|++||.+.+..+++.++..+.+ +.+..+|+++++||.
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~-~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~  258 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVS  258 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred             ccccccCCCccccCHHHHCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence            234567899999999999988885 899999999999999999999999999999999988876 456789999999999


Q ss_pred             HhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          254 KLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       254 ~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      +||++||++|||++|+|+||||++...
T Consensus       259 ~~L~~dP~~R~s~~e~l~hp~~~~~~~  285 (350)
T 4b9d_A          259 QLFKRNPRDRPSVNSILEKGFIAKRIE  285 (350)
T ss_dssp             HHTCSSGGGSCCHHHHHTSHHHHTTGG
T ss_pred             HHccCChhHCcCHHHHhcCHHhhcCCC
Confidence            999999999999999999999976443


No 5  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=5.5e-65  Score=512.57  Aligned_cols=258  Identities=24%  Similarity=0.441  Sum_probs=234.2

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      .++|++++.||+|+||+||+|++..+|+.||||++......   ..+.+.+|+.+|+.|+|||||+++++|.+.+.+|||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV  226 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV  226 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence            35799999999999999999999999999999999865433   235688999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCcc
Q 013522           98 MDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLL  177 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~  177 (441)
                      ||||.||+|.+++..+++++..++.|+.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....  .....
T Consensus       227 mEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~--~~~~~  304 (423)
T 4fie_A          227 MEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRR  304 (423)
T ss_dssp             EECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS--SCCCB
T ss_pred             EeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCC--CCccc
Confidence            9999999999999989999999999999999999999999999999999999999999999999999986432  23445


Q ss_pred             cccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC---CCCCCCCHHHHHHHHH
Q 013522          178 HTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF---KCPPWFSSEARRLITK  254 (441)
Q Consensus       178 ~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~  254 (441)
                      .+.||||.|||||++.+..|+ .++|||||||++|+|++|++||.+.+....+..+..+..   ..+..+|+++++||.+
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~-~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~  383 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYG-PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR  383 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred             cccccCcCcCCHHHHCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHH
Confidence            678999999999999988884 899999999999999999999999999988888877643   3445689999999999


Q ss_pred             hcCCCCCCCCCHHHHhcCcccCccCCc
Q 013522          255 LLDPNPNSRIAISKIMESSWFKKSAPK  281 (441)
Q Consensus       255 ~L~~dP~~R~t~~eil~hpwf~~~~~~  281 (441)
                      ||+.||++|||+.|+|+||||++..++
T Consensus       384 ~L~~dP~~R~ta~ell~Hp~~~~~~~p  410 (423)
T 4fie_A          384 LLVRDPAQRATAAELLKHPFLAKAGPP  410 (423)
T ss_dssp             HSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HcCCChhHCcCHHHHhcCHHhcCCCCC
Confidence            999999999999999999999876543


No 6  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=4.6e-66  Score=500.74  Aligned_cols=256  Identities=36%  Similarity=0.658  Sum_probs=227.2

Q ss_pred             CCeEEeeeecccCceEEEEEEEc---CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           19 GKYELGRMLGHGTFAKVYLARNL---QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        19 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ++|++++.||+|+||+||+|++.   .+++.||+|++.+..... .....+.+|+.+|+.++|||||++++++.+++.+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~  102 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY  102 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-EECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            67999999999999999999984   468899999998765432 22346789999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccC
Q 013522           96 FAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQD  174 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~  174 (441)
                      +|||||+||+|++++.+ +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....  ..
T Consensus       103 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~--~~  180 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID--HE  180 (304)
T ss_dssp             EEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-------
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccC--CC
Confidence            99999999999999976 8899999999999999999999999999999999999999999999999999975432  23


Q ss_pred             CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 013522          175 GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITK  254 (441)
Q Consensus       175 ~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  254 (441)
                      ....+.||||.|||||++.+.+|+ .++|||||||+||+|++|++||.+.+..+++.++.++.+.+|+.+|+++++||.+
T Consensus       181 ~~~~~~~GT~~YmAPE~~~~~~y~-~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  259 (304)
T 3ubd_A          181 KKAYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRM  259 (304)
T ss_dssp             CCCCSCCCCGGGCCHHHHHTSCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred             ccccccccCcccCCHHHhccCCCC-CCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHHHH
Confidence            445678999999999999988886 8999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCCC-----HHHHhcCcccCcc
Q 013522          255 LLDPNPNSRIA-----ISKIMESSWFKKS  278 (441)
Q Consensus       255 ~L~~dP~~R~t-----~~eil~hpwf~~~  278 (441)
                      ||++||++|||     ++|+++||||+..
T Consensus       260 ~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          260 LFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             HTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            99999999998     5899999999864


No 7  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=8.1e-64  Score=482.43  Aligned_cols=255  Identities=23%  Similarity=0.469  Sum_probs=222.7

Q ss_pred             cccCCe-EEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe----
Q 013522           16 LLHGKY-ELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS----   90 (441)
Q Consensus        16 ~~~~~y-~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~----   90 (441)
                      ...+|| ++.+.||+|+||+||+|++..++..||+|++....... ...+.+.+|+.+|+.|+|||||++++++.+    
T Consensus        22 ~~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~  100 (290)
T 3fpq_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG  100 (290)
T ss_dssp             CTTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETT
T ss_pred             CCCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH-HHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCC
Confidence            345677 78899999999999999999999999999998765433 456789999999999999999999999865    


Q ss_pred             CCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcC--cEeccCCCCcEEeCC-CCCeEEeecCccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRG--VYHRDLKPENLLLDE-DGNLKVTDFGLSA  166 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~g--i~HrDLkp~NILl~~-~~~vkl~DFGla~  166 (441)
                      ...+|+|||||+||+|.+++.+ +.+++..++.++.||+.||+|||++|  |+||||||+|||++. +|.+||+|||+|+
T Consensus       101 ~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~  180 (290)
T 3fpq_A          101 KKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             CcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence            3568999999999999999976 78999999999999999999999998  999999999999984 7899999999997


Q ss_pred             cccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC-cHHHHHHHHHcCCCC--CCCC
Q 013522          167 FSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD-NIVSMYRKIYRGDFK--CPPW  243 (441)
Q Consensus       167 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~-~~~~~~~~i~~~~~~--~~~~  243 (441)
                      ...    .....+.+|||.|||||++.+ +| +.++|||||||+||+|+||++||.+. +...++..+..+..+  ++..
T Consensus       181 ~~~----~~~~~~~~GTp~YmAPE~~~~-~y-~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~  254 (290)
T 3fpq_A          181 LKR----ASFAKAVIGTPEFMAPEMYEE-KY-DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKV  254 (290)
T ss_dssp             GCC----TTSBEESCSSCCCCCGGGGGT-CC-CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGC
T ss_pred             eCC----CCccCCcccCccccCHHHcCC-CC-CcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCcc
Confidence            532    345567899999999999865 56 48999999999999999999999764 455666666665432  3556


Q ss_pred             CCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          244 FSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       244 ~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      +++++++||.+||+.||++|||++++|+||||++
T Consensus       255 ~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          255 AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            8899999999999999999999999999999985


No 8  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=1.8e-63  Score=488.31  Aligned_cols=253  Identities=26%  Similarity=0.355  Sum_probs=223.5

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      .+.|++.++||+|+||+||+|++..+|+.||||+++++...        .+|+.+|+.|+|||||++++++.+++.+|||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--------~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------THHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--------HHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            35699999999999999999999999999999999876432        3799999999999999999999999999999


Q ss_pred             EeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC-CeEEeecCccccccccccCC
Q 013522           98 MDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG-NLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~-~vkl~DFGla~~~~~~~~~~  175 (441)
                      ||||+||+|.+++.. +++++..++.|+.||+.||+|||++||+||||||+|||++.+| .+||+|||+|+.........
T Consensus       129 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~  208 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK  208 (336)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred             EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence            999999999999976 8899999999999999999999999999999999999999988 59999999998654322111


Q ss_pred             ---cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC---CCCCCCCHHHH
Q 013522          176 ---LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF---KCPPWFSSEAR  249 (441)
Q Consensus       176 ---~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~  249 (441)
                         ...+.||||.|||||++.+.+|+ .++|||||||+||+|++|++||.+.+...++.++..+..   ..|+.+++++.
T Consensus       209 ~~~~~~~~~GT~~YmAPE~~~~~~y~-~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~  287 (336)
T 4g3f_A          209 SLLTGDYIPGTETHMAPEVVMGKPCD-AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTA  287 (336)
T ss_dssp             -----CCCCCCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHH
T ss_pred             ceecCCccccCccccCHHHHCCCCCC-cHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHH
Confidence               22346899999999999988885 899999999999999999999999888778888887765   35778999999


Q ss_pred             HHHHHhcCCCCCCCCCHHHH-------------hcCcccCccC
Q 013522          250 RLITKLLDPNPNSRIAISKI-------------MESSWFKKSA  279 (441)
Q Consensus       250 ~li~~~L~~dP~~R~t~~ei-------------l~hpwf~~~~  279 (441)
                      +||.+||++||++|||+.|+             ++|||+.+..
T Consensus       288 ~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          288 QAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence            99999999999999999997             5799987543


No 9  
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=4.6e-61  Score=495.17  Aligned_cols=393  Identities=33%  Similarity=0.613  Sum_probs=311.2

Q ss_pred             CCCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           11 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        11 ~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      ...+.+..++|.+++.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+|+.++||||+++++++.+
T Consensus         8 ~~~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~   87 (476)
T 2y94_A            8 KHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST   87 (476)
T ss_dssp             -CCSCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccCCCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            34566788999999999999999999999999999999999987654333456789999999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      .+.+|+||||+.||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        88 ~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~  167 (476)
T 2y94_A           88 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  167 (476)
T ss_dssp             SSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence            9999999999999999999976 679999999999999999999999999999999999999999999999999997543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHH
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEAR  249 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  249 (441)
                         ......+.+||+.|+|||++.+..+.+.++|||||||++|+|++|..||.+.+...++.++..+.+..|..+++++.
T Consensus       168 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~  244 (476)
T 2y94_A          168 ---DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVI  244 (476)
T ss_dssp             ---TTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHH
T ss_pred             ---ccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHH
Confidence               23445678999999999999988887789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCHHHHhcCcccCccCCccccchh--------hhh----------hhhc--------cCCCCcc--
Q 013522          250 RLITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQ--------EME----------FEAD--------KSSKQPE--  301 (441)
Q Consensus       250 ~li~~~L~~dP~~R~t~~eil~hpwf~~~~~~~~~~~~--------~~~----------~~~~--------~~~~~~~--  301 (441)
                      +||.+||..||.+|||+.++++||||+...+.......        +..          ....        .....+.  
T Consensus       245 ~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  324 (476)
T 2y94_A          245 SLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAV  324 (476)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTCHHHHTTCCTTTTTSSSCSSCSHHHHHHHHSCCCC-----------------------
T ss_pred             HHHHHHcCCCchhCcCHHHHHhCHHhhhcCccccCCCCcccccccCCHHHHHHHHHHcCCCHHHHHHHHhCCCCCCHHHH
Confidence            99999999999999999999999999765332111000        000          0000        0000000  


Q ss_pred             -------------ccchhh---------------------hhccCC--CC----CCChhh-----HHhhHHHhhhhcccc
Q 013522          302 -------------TLNAFH---------------------IISLSE--GF----DLSPLF-----EEKKRAEREELRFAT  336 (441)
Q Consensus       302 -------------~~~~~~---------------------~~~~~~--~~----~l~~~~-----~~~~~~~~~~~~~~~  336 (441)
                                   ....+-                     ....+.  ..    .+....     ....+..+..+++.+
T Consensus       325 ~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~lgi~s  404 (476)
T 2y94_A          325 AYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHLGIRS  404 (476)
T ss_dssp             --------CCTTCCSSHHHHHHHHHHSCGGGTSCCCCSSCTTTTCSCCCCCCSTTCTTTSSSTTTCSCCCCCCEEESEEE
T ss_pred             HHHHHHhchhhhhhhhccccccCCccccccccccccCCcccCCcccccCCcccccccccccccccccccccceeeecCcc
Confidence                         000000                     000000  00    000000     001123356678888


Q ss_pred             cCCchhhHHHHHHHHHHcCcEEEeec-CeEEEEeeecCCccceEEEEEEEEecCceEEEEEEccCCChhhh
Q 013522          337 TRPASSVISRFEEVAKAVKFNVKTSE-SRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEY  406 (441)
Q Consensus       337 ~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~v~~~~~~Gd~le~  406 (441)
                      +.++.+++..+..+++.+|+.|+..+ +.|++....+.....+.|.+++|++.+..+||||++..|+.++|
T Consensus       405 ~~~p~~im~ev~~al~~lg~~Wk~~~~~~i~~r~~~~~~~~~~k~~lqly~~~~~~~llDf~~~~~~~~~~  475 (476)
T 2y94_A          405 QSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRTYLLDFRSIDDEILEV  475 (476)
T ss_dssp             CSCHHHHHHHHHHHHHTTTCBCCEEETTEEEEEEECTTTCCEEEEEEEEEECSSSCEEEEEEEECCC----
T ss_pred             CCCHHHHHHHHHHHHHHcCCeeccCCCEEEEEEECCCCCCceEEEEEEEEEecCCcEEEEeeecCCCcccc
Confidence            99999999999999999999999755 77999764333344567999999999999999999999999987


No 10 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-61  Score=487.52  Aligned_cols=261  Identities=26%  Similarity=0.400  Sum_probs=225.7

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe------
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS------   90 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~------   90 (441)
                      +.++|++++.||+|+||+||+|++..+|+.||||++.+... .....+.+.+|+.+|+.|+|||||++++++..      
T Consensus        52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~  130 (398)
T 4b99_A           52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE  130 (398)
T ss_dssp             CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTT
T ss_pred             CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccccc
Confidence            34689999999999999999999999999999999976543 23456778899999999999999999999864      


Q ss_pred             CCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      .+.+|+|||||. |+|++++.. +++++..++.|+.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus       131 ~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          131 FKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             CCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             CCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            367999999996 579999976 789999999999999999999999999999999999999999999999999997643


Q ss_pred             cc--ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCC-------
Q 013522          170 HL--KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKC-------  240 (441)
Q Consensus       170 ~~--~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~-------  240 (441)
                      ..  .......+.+||+.|+|||++.+..+++.++||||+||++|+|++|++||.+.+..+.+..|.......       
T Consensus       210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~  289 (398)
T 4b99_A          210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA  289 (398)
T ss_dssp             ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred             cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence            22  223455678999999999999887777899999999999999999999999999888877775421111       


Q ss_pred             ------------------------CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          241 ------------------------PPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       241 ------------------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                              .+.+++++.+||.+||.+||++|||+.|+|+||||++..
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence                                    124689999999999999999999999999999998643


No 11 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=3.6e-60  Score=498.52  Aligned_cols=260  Identities=31%  Similarity=0.493  Sum_probs=229.5

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHH---HHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIK---REISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~---~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      +..++|++++.||+|+||+||+|++..+|+.||||++.+...........+.   +++.+++.++|||||+++++|.+.+
T Consensus       186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~  265 (689)
T 3v5w_A          186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD  265 (689)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred             CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence            3457899999999999999999999999999999999876543333333333   4466777889999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .+|+|||||+||+|++++.+ +++++..++.|+.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.... 
T Consensus       266 ~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~-  344 (689)
T 3v5w_A          266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-  344 (689)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS-
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCC-
Confidence            99999999999999999976 8899999999999999999999999999999999999999999999999999975432 


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC---cHHHHHHHHHcCCCCCCCCCCHHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD---NIVSMYRKIYRGDFKCPPWFSSEA  248 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~  248 (441)
                         ....+.||||.|||||++.+...++.++|||||||+||+|++|.+||.+.   +...+...+....+.+|..+|+++
T Consensus       345 ---~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a  421 (689)
T 3v5w_A          345 ---KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL  421 (689)
T ss_dssp             ---CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             ---CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHH
Confidence               34567899999999999975433458999999999999999999999764   445677888888999999999999


Q ss_pred             HHHHHHhcCCCCCCCCC-----HHHHhcCcccCccC
Q 013522          249 RRLITKLLDPNPNSRIA-----ISKIMESSWFKKSA  279 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t-----~~eil~hpwf~~~~  279 (441)
                      ++||.+||+.||.+|++     +++|++||||+...
T Consensus       422 ~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             HHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             HHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence            99999999999999998     79999999998643


No 12 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=7.3e-60  Score=469.69  Aligned_cols=255  Identities=27%  Similarity=0.445  Sum_probs=211.3

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEc---CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNL---QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASK   91 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~   91 (441)
                      .+.++|++++.||+|+||+||+|++.   .+++.||+|.+.+..     ...++.+|+.+|+.+ +||||+++++++.+.
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN   92 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence            36789999999999999999999875   467899999986543     235688999999998 699999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC-CCeEEeecCccccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED-GNLKVTDFGLSAFSEH  170 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~-~~vkl~DFGla~~~~~  170 (441)
                      +++|+|||||+||+|.+++.  .+++.+++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+....
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~--~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN--SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             CEEEEEEeCCCcccHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            99999999999999999984  59999999999999999999999999999999999999877 7999999999975432


Q ss_pred             cc--------------------------cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCC-
Q 013522          171 LK--------------------------QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQD-  223 (441)
Q Consensus       171 ~~--------------------------~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~-  223 (441)
                      ..                          ......+.+|||.|+|||++.+.++++.++||||+||++|+|++|++||.. 
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            11                          112345678999999999998877667999999999999999999999954 


Q ss_pred             CcHHHHHHHHHc--------------------------------------CCC----------------CCCCCCCHHHH
Q 013522          224 DNIVSMYRKIYR--------------------------------------GDF----------------KCPPWFSSEAR  249 (441)
Q Consensus       224 ~~~~~~~~~i~~--------------------------------------~~~----------------~~~~~~~~~~~  249 (441)
                      .+.......|..                                      ...                ...+.+|++++
T Consensus       251 ~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~  330 (361)
T 4f9c_A          251 SDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAY  330 (361)
T ss_dssp             SSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHH
T ss_pred             CCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHH
Confidence            333333332211                                      000                11134789999


Q ss_pred             HHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          250 RLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       250 ~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      +||++||++||++|||++|+|+||||++
T Consensus       331 DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          331 DLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            9999999999999999999999999985


No 13 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=9.6e-60  Score=457.05  Aligned_cols=255  Identities=28%  Similarity=0.419  Sum_probs=203.2

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS-----   92 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----   92 (441)
                      .++|++++.||+|+||+||+|++..+|+.||||++....  .....+.+.+|+.+|+.|+|||||++++++.+.+     
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~   81 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL   81 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred             chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence            356999999999999999999999999999999997653  2344578999999999999999999999987544     


Q ss_pred             -------EEEEEEeccCCCchHHHHhc-CC---CCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEee
Q 013522           93 -------KIYFAMDLVKGGELFNKIAK-GR---LREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTD  161 (441)
Q Consensus        93 -------~~~lv~E~~~gg~L~~~i~~-~~---l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~D  161 (441)
                             .+|+|||||.||+|.+++.. +.   .++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|
T Consensus        82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEcc
Confidence                   47999999999999999976 33   45567899999999999999999999999999999999999999999


Q ss_pred             cCccccccccccC----------CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcH-HHHH
Q 013522          162 FGLSAFSEHLKQD----------GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNI-VSMY  230 (441)
Q Consensus       162 FGla~~~~~~~~~----------~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~-~~~~  230 (441)
                      ||+|+........          ....+.||||.|||||++.+.+|+ .++|||||||++|+|++   ||..... ....
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~-~~~DiwSlGvilyell~---Pf~~~~~~~~~~  237 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS-HKVDIFSLGLILFELLY---PFSTQMERVRTL  237 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCC-THHHHHHHHHHHHHHHS---CCSSHHHHHHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCC-CHHHHHHHHHHHHHHcc---CCCCccHHHHHH
Confidence            9999865432211          123456899999999999988885 89999999999999996   8865432 2334


Q ss_pred             HHHHcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          231 RKIYRGDFK-CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       231 ~~i~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      ..+....++ .++..++.+.+||.+||++||++|||+.++++||||++.
T Consensus       238 ~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~  286 (299)
T 4g31_A          238 TDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL  286 (299)
T ss_dssp             HHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred             HHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence            444443322 112356778999999999999999999999999999864


No 14 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.5e-59  Score=455.27  Aligned_cols=256  Identities=23%  Similarity=0.345  Sum_probs=223.7

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNL-----QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      .+-.++|.+.+.||+|+||+||+|++.     .++..||||++...   .....+.+.+|+.+|++|+|||||++++++.
T Consensus         9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~   85 (299)
T 4asz_A            9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCV   85 (299)
T ss_dssp             BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence            445578999999999999999999875     36789999999654   2345678999999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK--------------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG  155 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~--------------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~  155 (441)
                      +++.+|+|||||+||+|.+++..              ..+++..+..++.||+.||+|||+++|+||||||+|||++.++
T Consensus        86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~  165 (299)
T 4asz_A           86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL  165 (299)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence            99999999999999999999964              3589999999999999999999999999999999999999999


Q ss_pred             CeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHH
Q 013522          156 NLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIY  234 (441)
Q Consensus       156 ~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~  234 (441)
                      .+||+|||+|+..............+||+.|||||++.+..|+ .++|||||||+||||+| |+.||.+.+..++...+.
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~-~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~  244 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT  244 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            9999999999865443322233456799999999999988875 99999999999999998 999999999999999988


Q ss_pred             cCC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccC
Q 013522          235 RGD-FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFK  276 (441)
Q Consensus       235 ~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~  276 (441)
                      .+. ++.|+.+|+++.+||.+||+.||++|||+.+|  ++|++
T Consensus       245 ~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~  285 (299)
T 4asz_A          245 QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQ  285 (299)
T ss_dssp             HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHH
T ss_pred             cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHH
Confidence            875 46788899999999999999999999999999  45664


No 15 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=9.8e-59  Score=487.88  Aligned_cols=257  Identities=31%  Similarity=0.573  Sum_probs=234.6

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      +.++|++++.||+|+||+||+|+++.+|+.||+|++.+...   ...+.+.+|+.+|+.|+|||||+++++|.+.+.+|+
T Consensus       155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~---~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  231 (573)
T 3uto_A          155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM  231 (573)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred             CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch---hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            45789999999999999999999999999999999976532   345678999999999999999999999999999999


Q ss_pred             EEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC--CCeEEeecCccccccccc
Q 013522           97 AMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED--GNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~--~~vkl~DFGla~~~~~~~  172 (441)
                      |||||.||+|++++..  +.+++.+++.|+.||+.||.|||++||+||||||+|||++.+  +.+||+|||+|+...   
T Consensus       232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~---  308 (573)
T 3uto_A          232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD---  308 (573)
T ss_dssp             EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC---
T ss_pred             EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEcc---
Confidence            9999999999999964  679999999999999999999999999999999999999854  899999999998643   


Q ss_pred             cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCCCHHH
Q 013522          173 QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWFSSEA  248 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~  248 (441)
                      ......+.|||+.|+|||++.+.+| +.++|||||||+||+|++|.+||.+.+..+.+..+..+.+.++    +.+|+++
T Consensus       309 ~~~~~~~~~GT~~y~APEv~~~~~y-~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  387 (573)
T 3uto_A          309 PKQSVKVTTGTAEFAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG  387 (573)
T ss_dssp             TTSEEEEECSSGGGCCHHHHTTCCB-CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHH
T ss_pred             CCCceeeeEECccccCHHHhCCCCC-CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence            3445667899999999999998888 4899999999999999999999999999999999998877665    4589999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          249 RRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      ++||.+||+.||.+|||+.|+|+||||+....
T Consensus       388 ~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          388 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence            99999999999999999999999999987544


No 16 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=1.4e-58  Score=454.43  Aligned_cols=252  Identities=22%  Similarity=0.336  Sum_probs=214.8

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNL-----QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      -..+|.+.+.||+|+||+||+|++.     .+++.||||++...   .....+.+.+|+.+|++|+|||||++++++.+.
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~  115 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEG  115 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3457899999999999999999875     36889999999654   234567899999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC
Q 013522           92 SKIYFAMDLVKGGELFNKIAK----------------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG  155 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~----------------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~  155 (441)
                      +.+|+|||||+||+|.+++..                +++++.++..++.|++.||+|||+++|+||||||+|||++.++
T Consensus       116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~  195 (329)
T 4aoj_A          116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL  195 (329)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCC
Confidence            999999999999999999864                3589999999999999999999999999999999999999999


Q ss_pred             CeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHH
Q 013522          156 NLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIY  234 (441)
Q Consensus       156 ~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~  234 (441)
                      .+||+|||+|+..............+||+.|||||++.+..|+ .++|||||||+||||+| |+.||.+.+..++...+.
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~-~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~  274 (329)
T 4aoj_A          196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT-TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT  274 (329)
T ss_dssp             EEEECCCC----------------CCCCGGGCCHHHHTTCCCC-HHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH
T ss_pred             cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCC-ccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            9999999999865443333344567899999999999988875 99999999999999999 999999999888888888


Q ss_pred             cC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          235 RG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       235 ~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      .+ .++.|+.+++++.+||.+||+.||++|||+.+|+++
T Consensus       275 ~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          275 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             cCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            76 467788899999999999999999999999999764


No 17 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.5e-58  Score=448.87  Aligned_cols=254  Identities=21%  Similarity=0.357  Sum_probs=207.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      +++-.+++++++.||+|+||+||+|++.   ..||||+++.... .....+.+.+|+.+|++++|||||++++++.+ +.
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~  105 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DN  105 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-Ce
Confidence            4555678999999999999999999863   3599999865433 33456789999999999999999999998754 56


Q ss_pred             EEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      +|||||||+||+|.+++..  +++++..+..++.||+.||+|||++||+||||||+|||+++++.+||+|||+|+.....
T Consensus       106 ~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  185 (307)
T 3omv_A          106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW  185 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred             EEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence            8999999999999999964  67999999999999999999999999999999999999999999999999999876544


Q ss_pred             ccCCcccccccCCCccchhhhhccC--CCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHH-HHHHcCCC-----CCCCC
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKG--YDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMY-RKIYRGDF-----KCPPW  243 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~--~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~-~~i~~~~~-----~~~~~  243 (441)
                      .......+.+||+.|||||++.+..  .++.++|||||||+||||+||+.||.+.+..... ..+..+..     ..++.
T Consensus       186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~  265 (307)
T 3omv_A          186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN  265 (307)
T ss_dssp             --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTT
T ss_pred             CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccccc
Confidence            4444566789999999999997432  2358999999999999999999999886654444 34444321     23456


Q ss_pred             CCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          244 FSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       244 ~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +++++.+||.+||+.||++|||+.+++++
T Consensus       266 ~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          266 CPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             SCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            89999999999999999999999987543


No 18 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=2.3e-58  Score=448.76  Aligned_cols=256  Identities=20%  Similarity=0.317  Sum_probs=225.6

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNL-----QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVM   88 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~   88 (441)
                      ..+-...+++.+.||+|+||+||+|++.     .+++.||||++....  .....+.+.+|+.+|++++|||||++++++
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~   98 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVV   98 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEE
Confidence            3455678999999999999999999864     467899999996543  223457899999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe
Q 013522           89 ASKSKIYFAMDLVKGGELFNKIAK-----------------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL  151 (441)
Q Consensus        89 ~~~~~~~lv~E~~~gg~L~~~i~~-----------------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl  151 (441)
                      .+.+.+|+|||||++|+|.+++..                 +.+++..+..++.||+.||+|||+++|+||||||+|||+
T Consensus        99 ~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl  178 (308)
T 4gt4_A           99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV  178 (308)
T ss_dssp             CSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE
Confidence            999999999999999999999953                 358999999999999999999999999999999999999


Q ss_pred             CCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHH
Q 013522          152 DEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMY  230 (441)
Q Consensus       152 ~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~  230 (441)
                      ++++.+||+|||+|+............+.+||+.|||||++.+..|+ .++|||||||+||||+| |..||.+.+..++.
T Consensus       179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s-~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~  257 (308)
T 4gt4_A          179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFS-IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV  257 (308)
T ss_dssp             CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred             CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCC-ccchhhhHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            99999999999999866544444455677899999999999988875 99999999999999998 89999999999999


Q ss_pred             HHHHcCC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          231 RKIYRGD-FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       231 ~~i~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ..+..+. .+.|+.+++++.+|+.+||+.||++|||+.+|+++
T Consensus       258 ~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          258 EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            8888775 46788899999999999999999999999999865


No 19 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.1e-56  Score=441.82  Aligned_cols=260  Identities=39%  Similarity=0.777  Sum_probs=241.2

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++++.||+|+||+||+|++..+|+.||+|++.+... .....+.+.+|+.+|+.++||||+++++++.+.+.+|
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   90 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY   90 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence            456899999999999999999999999999999999987654 3345678899999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccC
Q 013522           96 FAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQD  174 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~  174 (441)
                      +||||++||+|.+++.. +++++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....   ..
T Consensus        91 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~---~~  167 (328)
T 3fe3_A           91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT---VG  167 (328)
T ss_dssp             EEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS---SS
T ss_pred             EEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecC---CC
Confidence            99999999999999965 789999999999999999999999999999999999999999999999999987543   23


Q ss_pred             CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 013522          175 GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITK  254 (441)
Q Consensus       175 ~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  254 (441)
                      ......+||+.|+|||++.+..+++.++|||||||++|+|++|.+||.+.+...+...+..+.+..|..+++++.+||++
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  247 (328)
T 3fe3_A          168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKR  247 (328)
T ss_dssp             CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred             CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            45567889999999999999888888999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCCCHHHHhcCcccCccC
Q 013522          255 LLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       255 ~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ||..||.+|||+.++++||||+...
T Consensus       248 ~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          248 FLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             HCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             HCCCChhHCcCHHHHhcCHhhcCCC
Confidence            9999999999999999999998654


No 20 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.6e-56  Score=443.85  Aligned_cols=264  Identities=42%  Similarity=0.778  Sum_probs=231.3

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      ....+.++|++++.||+|+||+||+|++..+|+.||+|++.+.....  ....+.+|+.+|+.++||||+++++++.+.+
T Consensus         4 ~~~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~   81 (347)
T 3zgw_A            4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETAN   81 (347)
T ss_dssp             CSTTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             cHHHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch--HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence            34557899999999999999999999999999999999998765432  2457889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .+|+||||++||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        82 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~  161 (347)
T 3zgw_A           82 KIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN  161 (347)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred             EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence            99999999999999999965 78999999999999999999999999999999999999999999999999998754321


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRL  251 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l  251 (441)
                       ......+.+||+.|+|||++.+..+.+.++|||||||++|+|++|..||.+.+....+.++..+.+..|.++++++.+|
T Consensus       162 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  240 (347)
T 3zgw_A          162 -KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILL  240 (347)
T ss_dssp             -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHH
T ss_pred             -CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence             2233566789999999999998888789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          252 ITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       252 i~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      |.+||+.||.+|||+.++++||||....
T Consensus       241 i~~~L~~dP~~Rps~~eil~hp~~~~~~  268 (347)
T 3zgw_A          241 LQQMLQVDPKKRISMKNLLNHPWIMQDY  268 (347)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTCHHHHTTT
T ss_pred             HHHHcccCHhHCcCHHHHhcCcchhcCC
Confidence            9999999999999999999999998654


No 21 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=2e-56  Score=442.66  Aligned_cols=254  Identities=23%  Similarity=0.387  Sum_probs=217.5

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCC-----CcEEEEEEeecccccchhhHHHHHHHHHHHHhCCC-CCcceEEEEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQT-----GKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKH-KHIVELHEVMA   89 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~-----~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h-pnIv~l~~~~~   89 (441)
                      +-.++|++++.||+|+||+||+|++..+     ++.||||.+.....  ....+.+.+|+.+|++++| ||||++++++.
T Consensus        61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~--~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~  138 (353)
T 4ase_A           61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACT  138 (353)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence            4457899999999999999999998654     36899999975432  2345779999999999965 99999999986


Q ss_pred             e-CCEEEEEEeccCCCchHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe
Q 013522           90 S-KSKIYFAMDLVKGGELFNKIAK-----------------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL  151 (441)
Q Consensus        90 ~-~~~~~lv~E~~~gg~L~~~i~~-----------------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl  151 (441)
                      + .+.+|+|||||+||+|.+++..                 ..+++..+..++.||+.||+|||+++|+||||||+|||+
T Consensus       139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl  218 (353)
T 4ase_A          139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  218 (353)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee
Confidence            5 4578999999999999999963                 237899999999999999999999999999999999999


Q ss_pred             CCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcH-HHH
Q 013522          152 DEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNI-VSM  229 (441)
Q Consensus       152 ~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~-~~~  229 (441)
                      ++++.+||+|||+|+............+.+||+.|||||++.+..|+ .++|||||||+||||+| |..||.+.+. ..+
T Consensus       219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~-~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~  297 (353)
T 4ase_A          219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  297 (353)
T ss_dssp             CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred             CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCC-CcccEeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            99999999999999865432222234466899999999999988875 99999999999999998 9999988654 445


Q ss_pred             HHHHHcC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          230 YRKIYRG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       230 ~~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ...+..+ .++.|+.+++++.+||.+||+.||++|||+.+|++|
T Consensus       298 ~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          298 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            5555555 467788899999999999999999999999999987


No 22 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1e-55  Score=439.25  Aligned_cols=263  Identities=33%  Similarity=0.621  Sum_probs=232.8

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASKS   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~   92 (441)
                      ..+..++|++++.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+.+
T Consensus        18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~   97 (353)
T 3txo_A           18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD   97 (353)
T ss_dssp             -----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence            345678999999999999999999999999999999999876554445567888999999988 7999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .+|+||||+.||+|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|..... 
T Consensus        98 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~-  176 (353)
T 3txo_A           98 RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC-  176 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeeccc-
Confidence            99999999999999999976 7899999999999999999999999999999999999999999999999999874222 


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRL  251 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l  251 (441)
                       ......+.+||+.|+|||++.+..|. .++|||||||++|+|++|.+||.+.+...++..+..+...+|.++++++.+|
T Consensus       177 -~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l  254 (353)
T 3txo_A          177 -NGVTTATFCGTPDYIAPEILQEMLYG-PAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGI  254 (353)
T ss_dssp             ----------CCGGGCCHHHHHHHHCT-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred             -CCccccccCCCcCeEChhhcCCCCcC-CccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence             22345677899999999999888774 8999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCH------HHHhcCcccCccC
Q 013522          252 ITKLLDPNPNSRIAI------SKIMESSWFKKSA  279 (441)
Q Consensus       252 i~~~L~~dP~~R~t~------~eil~hpwf~~~~  279 (441)
                      |++||+.||.+||++      .++++||||+...
T Consensus       255 i~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          255 LKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             HHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred             HHHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence            999999999999998      8999999998643


No 23 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=5.9e-55  Score=431.09  Aligned_cols=260  Identities=33%  Similarity=0.641  Sum_probs=237.6

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      ..++|++++.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+|+.++||||+++++++.+.+.+|+
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   82 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence            45789999999999999999999999999999999987654333456788999999999999999999999999999999


Q ss_pred             EEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522           97 AMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      ||||++||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....  ...
T Consensus        83 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~--~~~  160 (337)
T 1o6l_A           83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGA  160 (337)
T ss_dssp             EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--TTC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhccc--CCC
Confidence            9999999999999976 7799999999999999999999999999999999999999999999999999874221  233


Q ss_pred             cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 013522          176 LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKL  255 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~  255 (441)
                      ...+.+||+.|+|||++.+..| +.++|||||||++|+|++|..||.+.+...++..+..+...+|..+++++++||.+|
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~l  239 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL  239 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCB-CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccccChhhCChhhhcCCCC-CchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence            4567889999999999988777 589999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCC-----CHHHHhcCcccCccC
Q 013522          256 LDPNPNSRI-----AISKIMESSWFKKSA  279 (441)
Q Consensus       256 L~~dP~~R~-----t~~eil~hpwf~~~~  279 (441)
                      |+.||++||     ++.++++||||+...
T Consensus       240 L~~dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          240 LKKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             TCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             hhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence            999999999     999999999998643


No 24 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-54  Score=425.08  Aligned_cols=258  Identities=34%  Similarity=0.726  Sum_probs=237.1

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++++.||+|+||+||+|++..+|+.||+|++.+.........+.+.+|+.+++.++||||+++++++.+...+|
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~   82 (318)
T 1fot_A            3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF   82 (318)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred             CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence            34678999999999999999999999999999999998765433345678889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccC
Q 013522           96 FAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQD  174 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~  174 (441)
                      +||||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....     
T Consensus        83 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~-----  157 (318)
T 1fot_A           83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP-----  157 (318)
T ss_dssp             EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECS-----
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecC-----
Confidence            99999999999999976 679999999999999999999999999999999999999999999999999997533     


Q ss_pred             CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 013522          175 GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITK  254 (441)
Q Consensus       175 ~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  254 (441)
                      ....+.+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+....+.++..+...+|+.+++++.+||.+
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  236 (318)
T 1fot_A          158 DVTYTLCGTPDYIAPEVVSTKPYN-KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSR  236 (318)
T ss_dssp             SCBCCCCSCTTTCCHHHHTTCCBC-TTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred             CccccccCCccccCHhHhcCCCCC-cccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            234567899999999999887774 8999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCC-----CHHHHhcCcccCccC
Q 013522          255 LLDPNPNSRI-----AISKIMESSWFKKSA  279 (441)
Q Consensus       255 ~L~~dP~~R~-----t~~eil~hpwf~~~~  279 (441)
                      ||..||.+||     +++++++||||+...
T Consensus       237 lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          237 LITRDLSQRLGNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             HTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             HhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence            9999999999     999999999998643


No 25 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=3.5e-54  Score=429.40  Aligned_cols=263  Identities=32%  Similarity=0.566  Sum_probs=236.5

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccch---hhHHHHHHHHHHHHhCCCCCcceEEEEE
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKV---GMMEQIKREISVMKMVKHKHIVELHEVM   88 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~hpnIv~l~~~~   88 (441)
                      .....+.++|++++.||+|+||+||+|++..+|+.||+|++.+......   ...+.+.+|+.+|+.++||||+++++++
T Consensus         5 ~~~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~   84 (361)
T 2yab_A            5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY   84 (361)
T ss_dssp             CBCSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccCCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE
Confidence            3445688999999999999999999999999999999999987654221   1356889999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC----CeEEeecC
Q 013522           89 ASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG----NLKVTDFG  163 (441)
Q Consensus        89 ~~~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~----~vkl~DFG  163 (441)
                      .+.+.+|+||||+.||+|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++    .+||+|||
T Consensus        85 ~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG  164 (361)
T 2yab_A           85 ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (361)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred             EeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence            999999999999999999999976 6799999999999999999999999999999999999998877    79999999


Q ss_pred             ccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC--
Q 013522          164 LSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP--  241 (441)
Q Consensus       164 la~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~--  241 (441)
                      ++.....   .......+||+.|+|||++.+..| +.++|||||||++|+|++|.+||.+.+....+..+..+.+.++  
T Consensus       165 ~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  240 (361)
T 2yab_A          165 LAHEIED---GVEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE  240 (361)
T ss_dssp             SCEECCT---TCCCCCCCSCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHH
T ss_pred             CceEcCC---CCccccCCCCccEECchHHcCCCC-CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCch
Confidence            9975432   334556789999999999988777 4899999999999999999999999999999999998887765  


Q ss_pred             --CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          242 --PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       242 --~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                        +.+++.+++||.+||.+||.+|||+.++++||||+..
T Consensus       241 ~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          241 FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence              4689999999999999999999999999999999854


No 26 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=5.8e-56  Score=438.07  Aligned_cols=261  Identities=40%  Similarity=0.793  Sum_probs=234.5

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV   85 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            46689999999999999999999999999999999997654433334567899999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccC
Q 013522           96 FAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQD  174 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~  174 (441)
                      +||||+ +|+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....   .
T Consensus        86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~---~  161 (336)
T 3h4j_B           86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD---G  161 (336)
T ss_dssp             EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT---S
T ss_pred             EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccC---C
Confidence            999999 6789998865 7899999999999999999999999999999999999999999999999999975432   3


Q ss_pred             CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 013522          175 GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITK  254 (441)
Q Consensus       175 ~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  254 (441)
                      ....+.+||+.|+|||++.+..+.+.++|||||||++|+|++|..||.+.+...+...+..+.+..|..+++++.+||++
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  241 (336)
T 3h4j_B          162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRR  241 (336)
T ss_dssp             BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHT
T ss_pred             cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence            34567789999999999988877778999999999999999999999988776666666667778889999999999999


Q ss_pred             hcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          255 LLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       255 ~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      ||.+||.+|||+.++++||||+...+
T Consensus       242 ~L~~dP~~Rpt~~eil~hp~~~~~~~  267 (336)
T 3h4j_B          242 MIVADPMQRITIQEIRRDPWFNVNLP  267 (336)
T ss_dssp             TSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred             HcCCChhHCcCHHHHHhChhhccCCc
Confidence            99999999999999999999986543


No 27 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=1.1e-54  Score=430.44  Aligned_cols=263  Identities=32%  Similarity=0.590  Sum_probs=236.8

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASKS   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~   92 (441)
                      .....++|++.+.||+|+||+||+|++..+|+.||+|++.+...........+.+|..+++.+ +||||+++++++.+.+
T Consensus        12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence            345678999999999999999999999999999999999876543334567788999999876 9999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .+|+||||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..... 
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~-  170 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML-  170 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc-
Confidence            99999999999999999986 7899999999999999999999999999999999999999999999999999874321 


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRL  251 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l  251 (441)
                       ......+.+||+.|+|||++.+..| +.++|||||||++|+|++|..||.+.+...++..+..+...+|.++++++++|
T Consensus       171 -~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  248 (345)
T 1xjd_A          171 -GDAKTNTFCGTPDYIAPEILLGQKY-NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDL  248 (345)
T ss_dssp             -TTCCBCCCCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred             -CCCcccCCCCCcccCChhhhcCCCC-CChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHH
Confidence             2234567789999999999988777 48999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCHH-HHhcCcccCccC
Q 013522          252 ITKLLDPNPNSRIAIS-KIMESSWFKKSA  279 (441)
Q Consensus       252 i~~~L~~dP~~R~t~~-eil~hpwf~~~~  279 (441)
                      |.+||..||++||++. ++++||||+...
T Consensus       249 i~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          249 LVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             HHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             HHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence            9999999999999998 999999998643


No 28 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=2.3e-54  Score=435.34  Aligned_cols=263  Identities=30%  Similarity=0.591  Sum_probs=232.1

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASKS   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~   92 (441)
                      ..+-.++|++++.||+|+||+||+|++..+++.||+|++.+.........+.+.+|..+++.+ +||||+++++++.+.+
T Consensus        47 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~  126 (396)
T 4dc2_A           47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES  126 (396)
T ss_dssp             --CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             cCCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC
Confidence            345567899999999999999999999999999999999877655444556788999999877 8999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .+|+||||+.||+|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...  
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~--  204 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--  204 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC--
T ss_pred             EEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecc--
Confidence            99999999999999999976 789999999999999999999999999999999999999999999999999987422  


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC---------cHHHHHHHHHcCCCCCCC
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD---------NIVSMYRKIYRGDFKCPP  242 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~---------~~~~~~~~i~~~~~~~~~  242 (441)
                      .......+.+||+.|+|||++.+..| +.++|||||||++|+|++|.+||...         ....++..+......+|.
T Consensus       205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~-~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~  283 (396)
T 4dc2_A          205 RPGDTTSTFCGTPNYIAPEILRGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR  283 (396)
T ss_dssp             CTTCCBCCCCBCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT
T ss_pred             cCCCccccccCCcccCCchhhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC
Confidence            23344567899999999999998877 48999999999999999999999632         344577888889999999


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCCH------HHHhcCcccCccC
Q 013522          243 WFSSEARRLITKLLDPNPNSRIAI------SKIMESSWFKKSA  279 (441)
Q Consensus       243 ~~~~~~~~li~~~L~~dP~~R~t~------~eil~hpwf~~~~  279 (441)
                      .+++++++||++||+.||.+||++      ++|++||||+...
T Consensus       284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~  326 (396)
T 4dc2_A          284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  326 (396)
T ss_dssp             TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred             cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence            999999999999999999999995      7999999998643


No 29 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=6e-54  Score=426.08  Aligned_cols=258  Identities=34%  Similarity=0.674  Sum_probs=238.2

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++++.||+|+||+||+|++..+|+.||+|++.+.........+.+.+|+.+|+.++||||+++++++.+.+.+|
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  117 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            45689999999999999999999999999999999998765444445678899999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccC
Q 013522           96 FAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQD  174 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~  174 (441)
                      +||||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....    
T Consensus       118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~----  193 (350)
T 1rdq_E          118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----  193 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS----
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC----
Confidence            99999999999999986 7899999999999999999999999999999999999999999999999999975432    


Q ss_pred             CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 013522          175 GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITK  254 (441)
Q Consensus       175 ~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  254 (441)
                       ...+.+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+...++.++..+...+|..+++++.+||.+
T Consensus       194 -~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  271 (350)
T 1rdq_E          194 -RTWTLCGTPEALAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN  271 (350)
T ss_dssp             -CBCCCEECGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHH
T ss_pred             -CcccccCCccccCHHHhcCCCCC-CcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence             23467899999999999887774 8999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCCC-----HHHHhcCcccCccC
Q 013522          255 LLDPNPNSRIA-----ISKIMESSWFKKSA  279 (441)
Q Consensus       255 ~L~~dP~~R~t-----~~eil~hpwf~~~~  279 (441)
                      ||+.||.+||+     +++|++||||+...
T Consensus       272 lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~  301 (350)
T 1rdq_E          272 LLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             HSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             HhhcCHHhccCCccCCHHHHHhCcCcCCCC
Confidence            99999999998     99999999998643


No 30 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=4.2e-54  Score=427.62  Aligned_cols=262  Identities=31%  Similarity=0.573  Sum_probs=236.5

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASKS   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~   92 (441)
                      ..+..++|++++.||+|+||+||+|++..+|+.||+|++.+.........+.+.+|..++..+ +||||+++++++.+.+
T Consensus        15 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~   94 (353)
T 2i0e_A           15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD   94 (353)
T ss_dssp             ----CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS
T ss_pred             CCCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC
Confidence            345678999999999999999999999999999999999876544444567788999999988 8999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .+|+||||++||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..... 
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~-  173 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW-  173 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc-
Confidence            99999999999999999986 7899999999999999999999999999999999999999999999999999874221 


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRL  251 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l  251 (441)
                       ......+.+||+.|+|||++.+.++ +.++|||||||++|+|++|..||.+.+...++.++..+...+|..+++++.+|
T Consensus       174 -~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  251 (353)
T 2i0e_A          174 -DGVTTKTFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI  251 (353)
T ss_dssp             -TTCCBCCCCSCGGGCCHHHHTTCCB-STHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred             -CCcccccccCCccccChhhhcCCCc-CCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence             2234567789999999999988777 58999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCC-----HHHHhcCcccCcc
Q 013522          252 ITKLLDPNPNSRIA-----ISKIMESSWFKKS  278 (441)
Q Consensus       252 i~~~L~~dP~~R~t-----~~eil~hpwf~~~  278 (441)
                      |.+||..||.+||+     +.++++||||+..
T Consensus       252 i~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          252 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             HHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence            99999999999995     6999999999854


No 31 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=1.4e-53  Score=422.71  Aligned_cols=261  Identities=31%  Similarity=0.598  Sum_probs=234.7

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASKSKI   94 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~   94 (441)
                      +..++|++++.||+|+||+||+|++..+++.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   85 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL   85 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence            4567899999999999999999999999999999999887665556677899999999988 899999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ  173 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~  173 (441)
                      |+||||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....  .
T Consensus        86 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~--~  163 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--P  163 (345)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC--T
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC--C
Confidence            999999999999999976 7899999999999999999999999999999999999999999999999999874221  2


Q ss_pred             CCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCC---------CcHHHHHHHHHcCCCCCCCCC
Q 013522          174 DGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQD---------DNIVSMYRKIYRGDFKCPPWF  244 (441)
Q Consensus       174 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~---------~~~~~~~~~i~~~~~~~~~~~  244 (441)
                      .....+.+||+.|+|||++.+..| +.++|||||||++|+|++|..||..         .+...++..+......+|..+
T Consensus       164 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~  242 (345)
T 3a8x_A          164 GDTTSTFCGTPNYIAPEILRGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL  242 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTS
T ss_pred             CCcccccCCCccccCccccCCCCC-ChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCC
Confidence            334567789999999999988777 5899999999999999999999975         344567778888888999999


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCH------HHHhcCcccCccC
Q 013522          245 SSEARRLITKLLDPNPNSRIAI------SKIMESSWFKKSA  279 (441)
Q Consensus       245 ~~~~~~li~~~L~~dP~~R~t~------~eil~hpwf~~~~  279 (441)
                      ++++++||.+||+.||.+||++      .++++||||+...
T Consensus       243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence            9999999999999999999995      8999999997643


No 32 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1.5e-53  Score=413.34  Aligned_cols=258  Identities=28%  Similarity=0.489  Sum_probs=229.2

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      ..++|++.+.||+|+||+||+|.+..+|+.||+|++......   ..+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   94 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWV   94 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence            567899999999999999999999999999999999765432   34678899999999999999999999999999999


Q ss_pred             EEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCc
Q 013522           97 AMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGL  176 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~  176 (441)
                      ||||+.||+|.+++....+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....  ....
T Consensus        95 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~  172 (297)
T 3fxz_A           95 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSK  172 (297)
T ss_dssp             EEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS--TTCC
T ss_pred             EEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCC--cccc
Confidence            99999999999999988899999999999999999999999999999999999999999999999999875432  2233


Q ss_pred             ccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC---CCCCCCCCCHHHHHHHH
Q 013522          177 LHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG---DFKCPPWFSSEARRLIT  253 (441)
Q Consensus       177 ~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~  253 (441)
                      ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+...   ....|..+++.+.+||.
T Consensus       173 ~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  251 (297)
T 3fxz_A          173 RSTMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  251 (297)
T ss_dssp             BCCCCSCGGGCCHHHHHCSCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHH
T ss_pred             cCCccCCcCccChhhhcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHH
Confidence            456689999999999988877 48999999999999999999999988776655555433   33456678999999999


Q ss_pred             HhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          254 KLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       254 ~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      +||+.||++|||+.++++||||+...+
T Consensus       252 ~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          252 RCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHccCChhHCcCHHHHhhChhhcccCc
Confidence            999999999999999999999986543


No 33 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=9.3e-54  Score=429.44  Aligned_cols=264  Identities=28%  Similarity=0.536  Sum_probs=235.9

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      ...+..++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+|+.++||||+++++++.+.+
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~   88 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE   88 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            34566789999999999999999999999999999999998765544455678899999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .+|+||||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|....  
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~--  166 (384)
T 4fr4_A           89 DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--  166 (384)
T ss_dssp             EEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeecc--
Confidence            99999999999999999986 679999999999999999999999999999999999999999999999999997543  


Q ss_pred             ccCCcccccccCCCccchhhhhcc--CCCCCcccHHHHHHHHHHHhhCCCCCCC---CcHHHHHHHHHcCCCCCCCCCCH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKK--GYDGAKADIWSCGVILYVLLAGFLPFQD---DNIVSMYRKIYRGDFKCPPWFSS  246 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~--~~~~~~~DiwSlGvil~~ll~G~~Pf~~---~~~~~~~~~i~~~~~~~~~~~~~  246 (441)
                       ......+.+||+.|+|||++...  ...+.++|||||||++|+|++|..||..   .....+...+......+|..+++
T Consensus       167 -~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~  245 (384)
T 4fr4_A          167 -RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQ  245 (384)
T ss_dssp             -TTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCH
T ss_pred             -CCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCH
Confidence             23445678899999999999642  2235889999999999999999999974   44566777778888889999999


Q ss_pred             HHHHHHHHhcCCCCCCCCC-HHHHhcCcccCccC
Q 013522          247 EARRLITKLLDPNPNSRIA-ISKIMESSWFKKSA  279 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t-~~eil~hpwf~~~~  279 (441)
                      ++.+||.+||+.||.+||+ ++++++||||+...
T Consensus       246 ~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          246 EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             HHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence            9999999999999999998 89999999998654


No 34 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=5.9e-54  Score=410.63  Aligned_cols=262  Identities=45%  Similarity=0.812  Sum_probs=214.3

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      .....++|++.+.||+|+||+||+|++..+|+.||+|++.............+.+|+.+++.++||||+++++++.+.+.
T Consensus         8 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   87 (275)
T 2eue_A            8 DGAHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE   87 (275)
T ss_dssp             CCCBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             CCCcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCe
Confidence            33456889999999999999999999999999999999987655544556789999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      .++||||+ +++|.+.+.. +.+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....  
T Consensus        88 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~--  164 (275)
T 2eue_A           88 IIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--  164 (275)
T ss_dssp             EEEEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred             EEEEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccC--
Confidence            99999999 6688887765 6799999999999999999999999999999999999999999999999999875432  


Q ss_pred             cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 013522          173 QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLI  252 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li  252 (441)
                       .......+||+.|+|||++.+..+.+.++|||||||++|+|++|..||.+.+.......+..+....|..+++.+.+||
T Consensus       165 -~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  243 (275)
T 2eue_A          165 -GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLI  243 (275)
T ss_dssp             -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHH
T ss_pred             -cccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence             2334566799999999999887776789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          253 TKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       253 ~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      .+||++||.+|||+.++++||||+...
T Consensus       244 ~~~l~~dP~~Rps~~e~l~h~~f~~~~  270 (275)
T 2eue_A          244 KRMLIVNPLNRISIHEIMQDDWFKVDL  270 (275)
T ss_dssp             HHHSCSSGGGSCCHHHHTTCHHHHTTC
T ss_pred             HHHhhcCHhHCCCHHHHhhCCeecccc
Confidence            999999999999999999999998654


No 35 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=2.2e-53  Score=423.69  Aligned_cols=273  Identities=38%  Similarity=0.664  Sum_probs=219.9

Q ss_pred             CCCCCCCCCCCCC-CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCC
Q 013522            1 MATSNSNGGGDDR-PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHK   79 (441)
Q Consensus         1 m~~~~~~~~~~~~-~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp   79 (441)
                      |+......++... .....++|++++.||+|+||+||+|++..+++.||+|++......    .+.+.+|+.+++.++||
T Consensus         1 m~~~~~~~~p~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp   76 (361)
T 3uc3_A            1 MDRAPVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHP   76 (361)
T ss_dssp             ----------CCCCCCCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCT
T ss_pred             CCCCCCCCCCCCccCCCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCC
Confidence            4444444444333 344568999999999999999999999999999999999765433    25688999999999999


Q ss_pred             CcceEEEEEEeCCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC--
Q 013522           80 HIVELHEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN--  156 (441)
Q Consensus        80 nIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~--  156 (441)
                      ||+++++++.+.+.+|+||||+.||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||++.++.  
T Consensus        77 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~  156 (361)
T 3uc3_A           77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPR  156 (361)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCC
T ss_pred             CCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCce
Confidence            999999999999999999999999999999975 78999999999999999999999999999999999999987765  


Q ss_pred             eEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCc----HHHHHHH
Q 013522          157 LKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDN----IVSMYRK  232 (441)
Q Consensus       157 vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~----~~~~~~~  232 (441)
                      +||+|||+|....   ........+||+.|+|||++.+..+++.++|||||||++|+|++|..||.+.+    .......
T Consensus       157 ~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~  233 (361)
T 3uc3_A          157 LKICDFGYSKSSV---LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR  233 (361)
T ss_dssp             EEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHH
T ss_pred             EEEeecCcccccc---ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHH
Confidence            9999999987422   22234556799999999999988887666999999999999999999998743    3455666


Q ss_pred             HHcCCCCCCC--CCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          233 IYRGDFKCPP--WFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       233 i~~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      +.......|.  .+++++.+||.+||..||.+|||+.++++||||.+..+
T Consensus       234 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~  283 (361)
T 3uc3_A          234 ILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLP  283 (361)
T ss_dssp             HHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTCC
T ss_pred             HhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCCc
Confidence            7766666665  47999999999999999999999999999999976543


No 36 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=1.8e-53  Score=426.07  Aligned_cols=263  Identities=35%  Similarity=0.604  Sum_probs=229.3

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHH-HHhCCCCCcceEEEEEEeCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISV-MKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~hpnIv~l~~~~~~~~   92 (441)
                      +....++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|..+ ++.++||||+++++++.+.+
T Consensus        33 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~  112 (373)
T 2r5t_A           33 PHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD  112 (373)
T ss_dssp             TTCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS
T ss_pred             CCCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC
Confidence            44567899999999999999999999999999999999988766554455667778877 57789999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .+|+||||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..... 
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~-  191 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE-  191 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC-
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc-
Confidence            99999999999999999976 7799999999999999999999999999999999999999999999999999874322 


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRL  251 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l  251 (441)
                       ......+.+||+.|+|||++.+..|. .++|||||||++|+|++|..||.+.+...++.++......+|+.+++++++|
T Consensus       192 -~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l  269 (373)
T 2r5t_A          192 -HNSTTSTFCGTPEYLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHL  269 (373)
T ss_dssp             -CCCCCCSBSCCCCCCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHH
T ss_pred             -CCCccccccCCccccCHHHhCCCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHH
Confidence             23345678999999999999887774 8999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCH----HHHhcCcccCccC
Q 013522          252 ITKLLDPNPNSRIAI----SKIMESSWFKKSA  279 (441)
Q Consensus       252 i~~~L~~dP~~R~t~----~eil~hpwf~~~~  279 (441)
                      |.+||+.||.+||++    .++++||||+...
T Consensus       270 i~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          270 LEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             HHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred             HHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence            999999999999997    6999999998643


No 37 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=2e-53  Score=417.51  Aligned_cols=261  Identities=34%  Similarity=0.616  Sum_probs=226.2

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      +.++|++++.||+|+||+||+|++..+++.||+|++......  ...+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l   82 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   82 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            678999999999999999999999999999999999755432  234678899999999999999999999999999999


Q ss_pred             EEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522           97 AMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      ||||+.|++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  162 (323)
T 3tki_A           83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (323)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence            9999999999999986 579999999999999999999999999999999999999999999999999998665444444


Q ss_pred             cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHHcCCCCCC--CCCCHHHHHHH
Q 013522          176 LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV-SMYRKIYRGDFKCP--PWFSSEARRLI  252 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~--~~~~~~~~~li  252 (441)
                      .....+||+.|+|||++.+..+.+.++|||||||++|+|++|..||...+.. ..+..+.......+  ..+++.+.+||
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (323)
T 3tki_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL  242 (323)
T ss_dssp             CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHH
T ss_pred             ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHH
Confidence            5567789999999999988877778899999999999999999999876543 33344444443333  34899999999


Q ss_pred             HHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          253 TKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       253 ~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      .+||..||++|||+.++++||||+...
T Consensus       243 ~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          243 HKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             HHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HHHccCChhhCcCHHHHhhChhhcccc
Confidence            999999999999999999999998654


No 38 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=2.5e-53  Score=434.37  Aligned_cols=261  Identities=36%  Similarity=0.668  Sum_probs=231.7

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      ....+.++|++++.||+|+||+||+|.+..+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+
T Consensus         5 ~~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~   83 (444)
T 3soa_A            5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEG   83 (444)
T ss_dssp             --CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS
T ss_pred             ccccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC
Confidence            3456788999999999999999999999999999999999876543 244677899999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC---CCCCeEEeecCccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD---EDGNLKVTDFGLSAFS  168 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~---~~~~vkl~DFGla~~~  168 (441)
                      ..|+||||+.||+|++.+.. +.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||+|...
T Consensus        84 ~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~  163 (444)
T 3soa_A           84 HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV  163 (444)
T ss_dssp             EEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred             EEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence            99999999999999999875 7799999999999999999999999999999999999998   4578999999999754


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCC----CC
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPP----WF  244 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~----~~  244 (441)
                      ..  ........+||+.|+|||++.+..| +.++|||||||++|+|++|.+||.+.+...++..+..+.+.+|.    .+
T Consensus       164 ~~--~~~~~~~~~gt~~Y~APE~l~~~~~-~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  240 (444)
T 3soa_A          164 EG--EQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV  240 (444)
T ss_dssp             CT--TCCBCCCSCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred             cC--CCceeecccCCcccCCHHHhcCCCC-CCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccC
Confidence            43  2233456789999999999988777 48999999999999999999999999999999999988776653    57


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          245 SSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       245 ~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      ++++.+||.+||++||++|||+.++|+||||+.
T Consensus       241 s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          241 TPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            999999999999999999999999999999974


No 39 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-53  Score=416.10  Aligned_cols=255  Identities=27%  Similarity=0.479  Sum_probs=230.9

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      .+.++|++++.||+|+||+||+|.+..+++.||+|++....    .....+.+|+.+++.++||||+++++++.+.+.+|
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~   77 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELV   77 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEE
Confidence            36789999999999999999999999999999999986442    33467889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC--CCCeEEeecCcccccccc
Q 013522           96 FAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE--DGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~--~~~vkl~DFGla~~~~~~  171 (441)
                      +||||+.|++|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++..... 
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~-  156 (321)
T 1tki_A           78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-  156 (321)
T ss_dssp             EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT-
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC-
Confidence            99999999999999976  46999999999999999999999999999999999999987  78999999999976432 


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCCCHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWFSSE  247 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~  247 (441)
                        .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+..+...++    +.++++
T Consensus       157 --~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  233 (321)
T 1tki_A          157 --GDNFRLLFTAPEYYAPEVHQHDVV-STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIE  233 (321)
T ss_dssp             --TCEEEEEESCGGGSCHHHHTTCEE-CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred             --CCccccccCChhhcCcHHhcCCCC-CchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHH
Confidence              334456789999999999987655 5899999999999999999999999999999999988887765    368999


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          248 ARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       248 ~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      +.+||.+||..||.+|||+.++++||||++.
T Consensus       234 ~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          234 AMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            9999999999999999999999999999754


No 40 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=4.3e-53  Score=415.87  Aligned_cols=264  Identities=35%  Similarity=0.640  Sum_probs=225.1

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEc---CCCcEEEEEEeecccccc-hhhHHHHHHHHHHHHhCCCCCcceEEEE
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNL---QTGKSMAMKVVGKDKVIK-VGMMEQIKREISVMKMVKHKHIVELHEV   87 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~   87 (441)
                      .+..+..++|++.+.||+|+||+||+|++.   .+|+.||+|++.+..... ......+.+|+.+|+.++||||++++++
T Consensus        10 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   89 (327)
T 3a62_A           10 GPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYA   89 (327)
T ss_dssp             ---CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEE
T ss_pred             CCCCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEE
Confidence            345567789999999999999999999985   689999999998654322 2234567899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccc
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSA  166 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~  166 (441)
                      +.+.+.+|+||||+.|++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           90 FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             EECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             EEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            9999999999999999999999975 779999999999999999999999999999999999999999999999999987


Q ss_pred             cccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCH
Q 013522          167 FSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSS  246 (441)
Q Consensus       167 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  246 (441)
                      ....  ........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+......+|+.+++
T Consensus       170 ~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~  246 (327)
T 3a62_A          170 ESIH--DGTVTHTFCGTIEYMAPEILMRSGH-NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQ  246 (327)
T ss_dssp             -----------CTTSSCCTTSCHHHHTTSCC-CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCH
T ss_pred             cccc--CCccccccCCCcCccCHhhCcCCCC-CCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCH
Confidence            4322  2223456789999999999988776 589999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCC-----CHHHHhcCcccCcc
Q 013522          247 EARRLITKLLDPNPNSRI-----AISKIMESSWFKKS  278 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~-----t~~eil~hpwf~~~  278 (441)
                      ++++||.+||..||.+||     ++.++++||||+..
T Consensus       247 ~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            999999999999999999     88999999999854


No 41 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.1e-53  Score=411.68  Aligned_cols=261  Identities=37%  Similarity=0.670  Sum_probs=224.0

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccc-----------------------hhhHHHHHHHH
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIK-----------------------VGMMEQIKREI   70 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-----------------------~~~~~~~~~Ei   70 (441)
                      ..+..++|++.+.||+|+||+||+|++..+++.||+|++.......                       ....+.+.+|+
T Consensus         8 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   87 (298)
T 2zv2_A            8 DCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEI   87 (298)
T ss_dssp             --CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHH
T ss_pred             CceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHH
Confidence            3456789999999999999999999999999999999997654321                       11235688999


Q ss_pred             HHHHhCCCCCcceEEEEEEe--CCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCc
Q 013522           71 SVMKMVKHKHIVELHEVMAS--KSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPEN  148 (441)
Q Consensus        71 ~il~~l~hpnIv~l~~~~~~--~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~N  148 (441)
                      .+|+.++||||+++++++.+  ...+|+||||+.+++|.+.+..+.+++..++.++.||+.||.|||++||+||||||+|
T Consensus        88 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  167 (298)
T 2zv2_A           88 AILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN  167 (298)
T ss_dssp             HHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             HHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            99999999999999999986  6789999999999999998877889999999999999999999999999999999999


Q ss_pred             EEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCC--CCCcccHHHHHHHHHHHhhCCCCCCCCcH
Q 013522          149 LLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGY--DGAKADIWSCGVILYVLLAGFLPFQDDNI  226 (441)
Q Consensus       149 ILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~--~~~~~DiwSlGvil~~ll~G~~Pf~~~~~  226 (441)
                      ||++.++.+||+|||++.....  ........+||+.|+|||++.+...  .+.++|||||||++|+|++|..||.+.+.
T Consensus       168 il~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  245 (298)
T 2zv2_A          168 LLVGEDGHIKIADFGVSNEFKG--SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI  245 (298)
T ss_dssp             EEECTTSCEEECCCTTCEECSS--SSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEECCCCCEEEecCCCcccccc--ccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence            9999999999999999875432  2223455689999999999876542  35789999999999999999999999988


Q ss_pred             HHHHHHHHcCCCCCC--CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccC
Q 013522          227 VSMYRKIYRGDFKCP--PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFK  276 (441)
Q Consensus       227 ~~~~~~i~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~  276 (441)
                      ......+.......|  +.+++++.+||.+||+.||++|||+.++++||||+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          246 MCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            888888877766554  46899999999999999999999999999999995


No 42 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=6e-54  Score=417.56  Aligned_cols=248  Identities=19%  Similarity=0.289  Sum_probs=196.6

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----E
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS----K   93 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----~   93 (441)
                      ..+|.+.+.||+|+||+||+|++  +|+.||||+++....    .....+.|+..+..++|||||++++++.+++    .
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~----~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~   75 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch----hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceE
Confidence            46799999999999999999998  789999999965421    1223345677777899999999999997653    6


Q ss_pred             EEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc--------CcEeccCCCCcEEeCCCCCeEEeecCcc
Q 013522           94 IYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSR--------GVYHRDLKPENLLLDEDGNLKVTDFGLS  165 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~--------gi~HrDLkp~NILl~~~~~vkl~DFGla  165 (441)
                      +|||||||+||+|.+++...+++++.+..++.|++.||+|||++        ||+||||||+|||++.++++||+|||+|
T Consensus        76 ~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           76 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence            89999999999999999998899999999999999999999987        9999999999999999999999999999


Q ss_pred             cccccccc--CCcccccccCCCccchhhhhccCC-----CCCcccHHHHHHHHHHHhhCCCCCCCC--------------
Q 013522          166 AFSEHLKQ--DGLLHTTCGTPAYVAPEVISKKGY-----DGAKADIWSCGVILYVLLAGFLPFQDD--------------  224 (441)
Q Consensus       166 ~~~~~~~~--~~~~~~~~gt~~y~APE~l~~~~~-----~~~~~DiwSlGvil~~ll~G~~Pf~~~--------------  224 (441)
                      +.......  .....+.+||+.|+|||++.+...     .+.++|||||||+||||+||.+||...              
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~  235 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence            86543221  122345689999999999975421     246899999999999999997765321              


Q ss_pred             -cHHHHHHHHHcCC--CCCCCC-----CCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          225 -NIVSMYRKIYRGD--FKCPPW-----FSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       225 -~~~~~~~~i~~~~--~~~~~~-----~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                       ....+...+....  +.+|..     .++.+.+|+.+||+.||++|||+.+|++
T Consensus       236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence             2234444444332  233332     2246789999999999999999999975


No 43 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.2e-53  Score=432.24  Aligned_cols=263  Identities=33%  Similarity=0.538  Sum_probs=231.4

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+...+|
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~  145 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  145 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            34578999999999999999999999999999999997654333233456789999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522           96 FAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      +||||++||+|.+++..+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|....... ..
T Consensus       146 lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~-~~  224 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MV  224 (410)
T ss_dssp             EEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-EE
T ss_pred             EEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC-cc
Confidence            99999999999999998889999999999999999999999999999999999999999999999999997543211 11


Q ss_pred             cccccccCCCccchhhhhccCC---CCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCC--CCCC--CCCCHHH
Q 013522          176 LLHTTCGTPAYVAPEVISKKGY---DGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGD--FKCP--PWFSSEA  248 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~---~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~--~~~~--~~~~~~~  248 (441)
                      ...+.+||+.|+|||++.+.+.   .+.++|||||||++|+|++|.+||.+.+....+.++..+.  ..+|  ..+++++
T Consensus       225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~  304 (410)
T 3v8s_A          225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA  304 (410)
T ss_dssp             ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHH
T ss_pred             cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHH
Confidence            2346789999999999986552   3589999999999999999999999999999999887642  3444  4689999


Q ss_pred             HHHHHHhcCCCCCC--CCCHHHHhcCcccCccC
Q 013522          249 RRLITKLLDPNPNS--RIAISKIMESSWFKKSA  279 (441)
Q Consensus       249 ~~li~~~L~~dP~~--R~t~~eil~hpwf~~~~  279 (441)
                      ++||.+||..+|.+  |+++++|++||||+...
T Consensus       305 ~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~  337 (410)
T 3v8s_A          305 KNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  337 (410)
T ss_dssp             HHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSS
T ss_pred             HHHHHHHccChhhhCCCCCHHHHhcCccccCCC
Confidence            99999999999999  99999999999998754


No 44 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=4.7e-53  Score=421.54  Aligned_cols=259  Identities=36%  Similarity=0.678  Sum_probs=232.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      ...+.++|++.+.||+|+||+||+|.+..+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        24 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  102 (362)
T 2bdw_A           24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESF  102 (362)
T ss_dssp             CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             CCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence            345677899999999999999999999999999999999876543 3456789999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC---CeEEeecCcccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG---NLKVTDFGLSAFSE  169 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~---~vkl~DFGla~~~~  169 (441)
                      .|+||||+.||+|.+.+.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++   .+||+|||++....
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~  182 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  182 (362)
T ss_dssp             EEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred             EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence            9999999999999999975 6799999999999999999999999999999999999998654   59999999997543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCC----CCC
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPP----WFS  245 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~  245 (441)
                      .   .......+||+.|+|||++.+..|. .++|||||||++|+|++|.+||.+.+...++..+..+.+.+|.    .++
T Consensus       183 ~---~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  258 (362)
T 2bdw_A          183 D---SEAWHGFAGTPGYLSPEVLKKDPYS-KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVT  258 (362)
T ss_dssp             T---CCSCCCSCSCTTTCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSC
T ss_pred             C---CcccccCCCCccccCHHHHccCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCC
Confidence            2   2334567899999999999887774 8999999999999999999999999999999999888776653    479


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      +++.+||.+||..||++|||+.++|+||||..
T Consensus       259 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          259 PEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            99999999999999999999999999999974


No 45 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.1e-52  Score=412.67  Aligned_cols=262  Identities=33%  Similarity=0.588  Sum_probs=233.6

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccch---hhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKV---GMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      ....+.++|++++.||+|+||+||+|++..+|+.||+|++.+......   ...+.+.+|+.+|+.++||||+++++++.
T Consensus         5 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   84 (326)
T 2y0a_A            5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE   84 (326)
T ss_dssp             BCSCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             ccCCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            345677899999999999999999999999999999999986543221   13578999999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC----CeEEeecCc
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG----NLKVTDFGL  164 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~----~vkl~DFGl  164 (441)
                      +....|+||||+.|++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||+
T Consensus        85 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A           85 NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence            99999999999999999999976 6799999999999999999999999999999999999999887    799999999


Q ss_pred             cccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC---
Q 013522          165 SAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP---  241 (441)
Q Consensus       165 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~---  241 (441)
                      +.....   .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+......++   
T Consensus       165 a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  240 (326)
T 2y0a_A          165 AHKIDF---GNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY  240 (326)
T ss_dssp             CEECCT---TSCCCCCCSCTTTCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHH
T ss_pred             CeECCC---CCccccccCCcCcCCceeecCCCC-CcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccc
Confidence            975432   233456789999999999987776 4899999999999999999999999988888888887776654   


Q ss_pred             -CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          242 -PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       242 -~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                       +.+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       241 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence             4689999999999999999999999999999999854


No 46 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=3.9e-53  Score=433.50  Aligned_cols=261  Identities=33%  Similarity=0.638  Sum_probs=227.0

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      .+..++|++++.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+
T Consensus       144 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~  223 (446)
T 4ejn_A          144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL  223 (446)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred             CCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence            45568899999999999999999999999999999999876544444556788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh-cCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHS-RGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~-~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      |+||||+.||+|.+++.. +.+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|.....  
T Consensus       224 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--  301 (446)
T 4ejn_A          224 CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--  301 (446)
T ss_dssp             EEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             EEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC--
Confidence            999999999999999976 779999999999999999999998 9999999999999999999999999999874322  


Q ss_pred             cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 013522          173 QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLI  252 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li  252 (441)
                      ......+.+||+.|+|||++.+..| +.++|||||||++|+|++|..||.+.+...+...+......+|..+++++.+||
T Consensus       302 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li  380 (446)
T 4ejn_A          302 DGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLL  380 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTSCC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred             CCcccccccCCccccCHhhcCCCCC-CCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence            2234556789999999999988777 589999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCC-----CHHHHhcCcccCcc
Q 013522          253 TKLLDPNPNSRI-----AISKIMESSWFKKS  278 (441)
Q Consensus       253 ~~~L~~dP~~R~-----t~~eil~hpwf~~~  278 (441)
                      .+||++||.+||     |+.++++||||+..
T Consensus       381 ~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          381 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             HHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            999999999999     99999999999864


No 47 
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1e-52  Score=401.79  Aligned_cols=266  Identities=44%  Similarity=0.811  Sum_probs=230.5

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      ..+.+..++|++++.||+|+||+||+|.+..+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   83 (276)
T 2h6d_A            4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP   83 (276)
T ss_dssp             ---CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             ccCcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            34566789999999999999999999999999999999999765433334467889999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      +..|+||||+.|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A           84 TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            999999999999999999975 7799999999999999999999999999999999999999999999999999875432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARR  250 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  250 (441)
                         .......+||+.|+|||++.+..+.+.++||||||+++|+|++|..||...+.......+..+....|..+++.+.+
T Consensus       164 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  240 (276)
T 2h6d_A          164 ---GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVAT  240 (276)
T ss_dssp             ----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred             ---CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHH
Confidence               22344567999999999998877766899999999999999999999999998888999988888889999999999


Q ss_pred             HHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          251 LITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       251 li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      ||.+||+.||.+|||+.++++||||++..+
T Consensus       241 li~~~l~~~p~~Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          241 LLMHMLQVDPLKRATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             HHHHHccCChhhCCCHHHHHhChhhccCch
Confidence            999999999999999999999999986553


No 48 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=3.6e-52  Score=401.92  Aligned_cols=257  Identities=31%  Similarity=0.529  Sum_probs=218.6

Q ss_pred             CCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEEE
Q 013522           19 GKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAM   98 (441)
Q Consensus        19 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv~   98 (441)
                      ++|++++.||+|+||+||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   80 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence            689999999999999999999999999999999986653 2345577889999999999999999999999999999999


Q ss_pred             eccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCc
Q 013522           99 DLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGL  176 (441)
Q Consensus        99 E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~  176 (441)
                      ||+.| ++.+.+..  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....  ....
T Consensus        81 e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~  157 (292)
T 3o0g_A           81 EFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI--PVRC  157 (292)
T ss_dssp             ECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS--CCSC
T ss_pred             ecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCC--cccc
Confidence            99987 55555543  7799999999999999999999999999999999999999999999999999975432  2233


Q ss_pred             ccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCC-CCCCcHHHHHHHHHcC--C----------------
Q 013522          177 LHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLP-FQDDNIVSMYRKIYRG--D----------------  237 (441)
Q Consensus       177 ~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~P-f~~~~~~~~~~~i~~~--~----------------  237 (441)
                      ....+||+.|+|||++.+....+.++|||||||++|+|++|..| |.+.+.......+...  .                
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T 3o0g_A          158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence            45667999999999998777567999999999999999987776 5666666666555331  0                


Q ss_pred             -----------CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          238 -----------FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       238 -----------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                 ...++.+++++++||.+||+.||++|||++++++||||++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence                       011234788999999999999999999999999999998643


No 49 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.4e-52  Score=409.18  Aligned_cols=263  Identities=29%  Similarity=0.444  Sum_probs=218.1

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      .....+.++|++++.||+|+||+||+|++. +|+.||+|++..... .......+.+|+.+++.++||||+++++++.+.
T Consensus        14 ~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   91 (311)
T 3niz_A           14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSE   91 (311)
T ss_dssp             -CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS
T ss_pred             eeecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC
Confidence            345568899999999999999999999984 689999999975532 223457788999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      ..+|+||||+.| +|.+.+..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        92 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A           92 RCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             SCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             CEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            999999999986 78887765  459999999999999999999999999999999999999999999999999997543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--CCC--------
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--DFK--------  239 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~~~--------  239 (441)
                      .  ........+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+...  ...        
T Consensus       171 ~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  248 (311)
T 3niz_A          171 I--PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ  248 (311)
T ss_dssp             S--CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGT
T ss_pred             C--CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhh
Confidence            2  2233455679999999999987555569999999999999999999999876655544444321  000        


Q ss_pred             --------------------CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          240 --------------------CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       240 --------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                          ..+.+++++.+||.+||++||++|||+.++++||||++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence                                1234678999999999999999999999999999998654


No 50 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=8.8e-53  Score=417.71  Aligned_cols=260  Identities=34%  Similarity=0.644  Sum_probs=226.2

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccc--hhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIK--VGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      ...+.++|++.+.||+|+||+||+|++..+|+.||+|++.......  ....+.+.+|+.+++.++||||+++++++.+.
T Consensus        19 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~   98 (351)
T 3c0i_A           19 DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD   98 (351)
T ss_dssp             -CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             CCccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            3467789999999999999999999999999999999997543221  11357789999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC---eEEeecC
Q 013522           92 SKIYFAMDLVKGGELFNKIAK-----GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN---LKVTDFG  163 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~-----~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~---vkl~DFG  163 (441)
                      +.+|+|||||.|++|.+.+..     ..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||
T Consensus        99 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg  178 (351)
T 3c0i_A           99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG  178 (351)
T ss_dssp             TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred             CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence            999999999999999888753     24899999999999999999999999999999999999987665   9999999


Q ss_pred             ccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC--
Q 013522          164 LSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP--  241 (441)
Q Consensus       164 la~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~--  241 (441)
                      ++.....  ........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+ ...+..+..+....+  
T Consensus       179 ~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~  254 (351)
T 3c0i_A          179 VAIQLGE--SGLVAGGRVGTPHFMAPEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPR  254 (351)
T ss_dssp             TCEECCT--TSCBCCCCCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHH
T ss_pred             ceeEecC--CCeeecCCcCCcCccCHHHHcCCCC-CchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCcc
Confidence            9975443  1223456789999999999988777 589999999999999999999998864 456677777776654  


Q ss_pred             --CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          242 --PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       242 --~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                        +.+++++++||.+||..||++|||+.++++||||+.
T Consensus       255 ~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          255 QWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence              468999999999999999999999999999999974


No 51 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=1.5e-52  Score=401.65  Aligned_cols=260  Identities=33%  Similarity=0.660  Sum_probs=233.1

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      ....++|++++.||+|+||+||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+..
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   84 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV   84 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence            34568999999999999999999999999999999999765544434467789999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ  173 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~  173 (441)
                      |+||||+.+++|.+.+.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....   
T Consensus        85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~---  161 (279)
T 3fdn_A           85 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---  161 (279)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc---
Confidence            999999999999999976 7899999999999999999999999999999999999999999999999998864332   


Q ss_pred             CCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 013522          174 DGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLIT  253 (441)
Q Consensus       174 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~  253 (441)
                       ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+.......|..+++++.+||.
T Consensus       162 -~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  239 (279)
T 3fdn_A          162 -SRRTDLCGTLDYLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS  239 (279)
T ss_dssp             -------CCCCTTCCHHHHTTCCC-CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred             -ccccccCCCCCccCHhHhccCCC-CccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHH
Confidence             22345679999999999987665 5899999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          254 KLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       254 ~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      +||+.||.+|||+.++++||||+...
T Consensus       240 ~~l~~~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          240 RLLKHNPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             HHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred             HHhccChhhCCCHHHHhhCccccCCc
Confidence            99999999999999999999997644


No 52 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=9.6e-53  Score=428.84  Aligned_cols=264  Identities=29%  Similarity=0.520  Sum_probs=229.2

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      ..++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l  151 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYL  151 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEE
Confidence            45789999999999999999999999999999999976543333334458899999999999999999999999999999


Q ss_pred             EEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccC
Q 013522           97 AMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQD  174 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~  174 (441)
                      ||||+.||+|.+++..  +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|...... ..
T Consensus       152 V~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~-~~  230 (437)
T 4aw2_A          152 VMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED-GT  230 (437)
T ss_dssp             EECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-SC
T ss_pred             EEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccC-CC
Confidence            9999999999999976  68999999999999999999999999999999999999999999999999999654321 11


Q ss_pred             CcccccccCCCccchhhhhc----cCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--CCCCCC---CCC
Q 013522          175 GLLHTTCGTPAYVAPEVISK----KGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--DFKCPP---WFS  245 (441)
Q Consensus       175 ~~~~~~~gt~~y~APE~l~~----~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~~~~~~---~~~  245 (441)
                      ......+||+.|+|||++..    ....+.++|||||||++|+|++|++||.+.+..+.+.++...  .+.+|.   .++
T Consensus       231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s  310 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS  310 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSC
T ss_pred             cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCC
Confidence            12344689999999999972    233368999999999999999999999999999888888653  345554   489


Q ss_pred             HHHHHHHHHhcCCCCCC--CCCHHHHhcCcccCccCCc
Q 013522          246 SEARRLITKLLDPNPNS--RIAISKIMESSWFKKSAPK  281 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~--R~t~~eil~hpwf~~~~~~  281 (441)
                      +++++||++||..+|++  |++++++++||||+.....
T Consensus       311 ~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~  348 (437)
T 4aw2_A          311 ENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWD  348 (437)
T ss_dssp             HHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTT
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHH
Confidence            99999999999999988  9999999999999865443


No 53 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.4e-52  Score=419.83  Aligned_cols=263  Identities=28%  Similarity=0.419  Sum_probs=213.6

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC-
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-HKHIVELHEVMASKS-   92 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~-   92 (441)
                      ..+.++|++++.||+|+||+||+|.+..+|+.||+|++.+.. ........+.+|+.+++.+. ||||+++++++...+ 
T Consensus         5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~   83 (388)
T 3oz6_A            5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND   83 (388)
T ss_dssp             HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred             CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence            456789999999999999999999999999999999986543 23345677889999999997 999999999997544 


Q ss_pred             -EEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 -KIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 -~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                       .+|+||||+. ++|...+..+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus        84 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  162 (388)
T 3oz6_A           84 RDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI  162 (388)
T ss_dssp             SCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred             CEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence             7999999997 58999998888999999999999999999999999999999999999999999999999999754321


Q ss_pred             -------------------ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Q 013522          172 -------------------KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRK  232 (441)
Q Consensus       172 -------------------~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~  232 (441)
                                         .........+||++|+|||++.+....+.++|||||||++|+|++|++||.+.+....+..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  242 (388)
T 3oz6_A          163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER  242 (388)
T ss_dssp             CCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                               1122345678999999999998755556999999999999999999999999887776666


Q ss_pred             HHcCC-C----------------------------------------------CCCCCCCHHHHHHHHHhcCCCCCCCCC
Q 013522          233 IYRGD-F----------------------------------------------KCPPWFSSEARRLITKLLDPNPNSRIA  265 (441)
Q Consensus       233 i~~~~-~----------------------------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t  265 (441)
                      +...- .                                              ..+..+++++.+||.+||+.||++|||
T Consensus       243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t  322 (388)
T 3oz6_A          243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS  322 (388)
T ss_dssp             HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence            54210 0                                              011256889999999999999999999


Q ss_pred             HHHHhcCcccCccC
Q 013522          266 ISKIMESSWFKKSA  279 (441)
Q Consensus       266 ~~eil~hpwf~~~~  279 (441)
                      +.++|+||||+...
T Consensus       323 ~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          323 ANDALKHPFVSIFH  336 (388)
T ss_dssp             HHHHTTSTTTTTTC
T ss_pred             HHHHhCCHHHHHhc
Confidence            99999999997543


No 54 
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=5.5e-52  Score=398.83  Aligned_cols=261  Identities=36%  Similarity=0.687  Sum_probs=236.0

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      .....++|++++.||+|+||+||+|++..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+.
T Consensus         9 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   88 (284)
T 2vgo_A            9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR   88 (284)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             cchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCE
Confidence            44566899999999999999999999999999999999976544333445788999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      .|+||||+.+++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....  
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~--  166 (284)
T 2vgo_A           89 IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--  166 (284)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS--
T ss_pred             EEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc--
Confidence            9999999999999999976 7799999999999999999999999999999999999999999999999999864332  


Q ss_pred             cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 013522          173 QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLI  252 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li  252 (441)
                        ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+......+|+.+++++++||
T Consensus       167 --~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  243 (284)
T 2vgo_A          167 --LRRRTMCGTLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLI  243 (284)
T ss_dssp             --SCBCCCCSCGGGCCHHHHTTCCB-CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHH
T ss_pred             --cccccccCCCCcCCHHHhccCCC-CcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHH
Confidence              22345679999999999987766 489999999999999999999999999888888999888899999999999999


Q ss_pred             HHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          253 TKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       253 ~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      .+||..||.+|||+.++++||||+...
T Consensus       244 ~~~l~~~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          244 SKLLRYHPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             HHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred             HHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence            999999999999999999999997543


No 55 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2.1e-51  Score=394.27  Aligned_cols=260  Identities=35%  Similarity=0.675  Sum_probs=232.5

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      +.+.++|++.+.||+|+||+||+|.+..+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   80 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH   80 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEE
Confidence            45789999999999999999999999999999999999766543 34567889999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC---eEEeecCccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN---LKVTDFGLSAFSEH  170 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~---vkl~DFGla~~~~~  170 (441)
                      |+||||+.|++|.+.+.. +.+++..+..++.|++.||.|||++||+||||||+||+++.++.   +||+|||++.....
T Consensus        81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            999999999999988875 77999999999999999999999999999999999999987665   99999999875432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCCCH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWFSS  246 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~  246 (441)
                         ........||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+..+....|    ..+++
T Consensus       161 ---~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T 3kk8_A          161 ---SEAWHGFAGTPGYLSPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP  236 (284)
T ss_dssp             ---SCBCCCSCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCH
T ss_pred             ---CccccCCCCCcCCcCchhhcCCCC-CcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCH
Confidence               233445679999999999988776 5899999999999999999999999999888888888776554    35799


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          247 EARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ++.+||.+||++||++|||+.++++||||++..
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          237 EAKSLIDSMLTVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcCccccCCh
Confidence            999999999999999999999999999997643


No 56 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=8.8e-52  Score=398.59  Aligned_cols=254  Identities=30%  Similarity=0.497  Sum_probs=214.7

Q ss_pred             CCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEEE
Q 013522           19 GKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAM   98 (441)
Q Consensus        19 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv~   98 (441)
                      ++|++++.||+|+||+||+|++ .+|+.||+|++...... ......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence            6899999999999999999998 68999999999765432 233467889999999999999999999999999999999


Q ss_pred             eccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCc
Q 013522           99 DLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGL  176 (441)
Q Consensus        99 E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~  176 (441)
                      ||+.+ +|.+.+..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....  ....
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~  156 (288)
T 1ob3_A           80 EHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI--PVRK  156 (288)
T ss_dssp             ECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             EecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCc--cccc
Confidence            99986 89988875  6799999999999999999999999999999999999999999999999999875432  1223


Q ss_pred             ccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--CC----------------
Q 013522          177 LHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--DF----------------  238 (441)
Q Consensus       177 ~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~~----------------  238 (441)
                      ....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+.+.  ..                
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP  236 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccc
Confidence            345679999999999977655569999999999999999999999988776666555331  00                


Q ss_pred             -----------CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          239 -----------KCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       239 -----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                                 ..++.+++++.+||.+||+.||++|||+.++++||||++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence                       012347899999999999999999999999999999975


No 57 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.5e-52  Score=421.79  Aligned_cols=263  Identities=29%  Similarity=0.518  Sum_probs=227.3

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      +..++|++++.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.++..++||||+++++++.+.+.+|
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  137 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLY  137 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence            34578999999999999999999999999999999998654433334456889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc
Q 013522           96 FAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ  173 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~  173 (441)
                      +||||++||+|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....... 
T Consensus       138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~-  216 (412)
T 2vd5_A          138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG-  216 (412)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCC-
Confidence            99999999999999976  479999999999999999999999999999999999999999999999999997543211 


Q ss_pred             CCcccccccCCCccchhhhhc------cCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCC--CCCC---C
Q 013522          174 DGLLHTTCGTPAYVAPEVISK------KGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGD--FKCP---P  242 (441)
Q Consensus       174 ~~~~~~~~gt~~y~APE~l~~------~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~--~~~~---~  242 (441)
                      .......+||+.|+|||++..      ....+.++|||||||++|+|++|..||.+.+....+.++....  ..+|   .
T Consensus       217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  296 (412)
T 2vd5_A          217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDE  296 (412)
T ss_dssp             CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----
T ss_pred             ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcccc
Confidence            112235689999999999974      1223589999999999999999999999999988888887532  3333   5


Q ss_pred             CCCHHHHHHHHHhcCCCCCCC---CCHHHHhcCcccCccCC
Q 013522          243 WFSSEARRLITKLLDPNPNSR---IAISKIMESSWFKKSAP  280 (441)
Q Consensus       243 ~~~~~~~~li~~~L~~dP~~R---~t~~eil~hpwf~~~~~  280 (441)
                      .+++++++||++||. +|.+|   ++++++++||||+....
T Consensus       297 ~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w  336 (412)
T 2vd5_A          297 GVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDW  336 (412)
T ss_dssp             CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCS
T ss_pred             CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCH
Confidence            799999999999999 99998   59999999999986543


No 58 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.3e-51  Score=414.47  Aligned_cols=262  Identities=23%  Similarity=0.400  Sum_probs=219.4

Q ss_pred             cccCCeEEeeeeccc--CceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           16 LLHGKYELGRMLGHG--TFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G--~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      ...++|++++.||+|  +||+||+|++..+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  100 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE  100 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence            456799999999999  9999999999999999999999876543 3556788999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      +|+||||+.||+|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||.+.....
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred             EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence            9999999999999999975   5699999999999999999999999999999999999999999999999998754322


Q ss_pred             cc-----cCCcccccccCCCccchhhhhc--cCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC-----
Q 013522          171 LK-----QDGLLHTTCGTPAYVAPEVISK--KGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF-----  238 (441)
Q Consensus       171 ~~-----~~~~~~~~~gt~~y~APE~l~~--~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~-----  238 (441)
                      ..     ........+||+.|+|||++.+  ..+ +.++|||||||++|+|++|..||.+.+.......+..+..     
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  259 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGY-DAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD  259 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCB-CTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCC-CcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence            11     1122334579999999999987  344 5899999999999999999999987654443333222111     


Q ss_pred             -----------------------------------------CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          239 -----------------------------------------KCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       239 -----------------------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                                                               +.+..+++++.+||.+||++||++|||+.++|+||||+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~  339 (389)
T 3gni_B          260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  339 (389)
T ss_dssp             ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred             ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence                                                     134457899999999999999999999999999999986


Q ss_pred             cC
Q 013522          278 SA  279 (441)
Q Consensus       278 ~~  279 (441)
                      ..
T Consensus       340 ~~  341 (389)
T 3gni_B          340 IK  341 (389)
T ss_dssp             C-
T ss_pred             Hh
Confidence            54


No 59 
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=4.3e-52  Score=429.99  Aligned_cols=261  Identities=35%  Similarity=0.633  Sum_probs=234.7

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      ....+.++|++.+.||+|+||+||+|++..+|+.||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+
T Consensus        20 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   99 (484)
T 3nyv_A           20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG   99 (484)
T ss_dssp             CCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             CCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            34568889999999999999999999999999999999998766544455678999999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe---CCCCCeEEeecCccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL---DEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl---~~~~~vkl~DFGla~~~  168 (441)
                      ..|+||||+.||+|.+.+.. +.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|...
T Consensus       100 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  179 (484)
T 3nyv_A          100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF  179 (484)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred             EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence            99999999999999999875 789999999999999999999999999999999999999   46789999999998754


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCC
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWF  244 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~  244 (441)
                      ..   .......+||+.|+|||++.+ .| +.++|||||||++|+|++|.+||.+.+.......+..+.+.++    ..+
T Consensus       180 ~~---~~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  254 (484)
T 3nyv_A          180 EA---SKKMKDKIGTAYYIAPEVLHG-TY-DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV  254 (484)
T ss_dssp             CC---CCSHHHHTTGGGTCCHHHHHT-CC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGS
T ss_pred             cc---ccccccCCCCccccCceeecC-CC-CCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccC
Confidence            32   334566789999999999976 45 5899999999999999999999999999999999988876543    348


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          245 SSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       245 ~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      ++++++||.+||++||.+|||+.++|+||||+..
T Consensus       255 s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          255 SESAKDLIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence            9999999999999999999999999999999754


No 60 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=3.5e-51  Score=400.72  Aligned_cols=262  Identities=32%  Similarity=0.577  Sum_probs=233.6

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccch---hhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKV---GMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      ....+.++|++++.||+|+||+||+|++..+|+.||+|++........   ...+.+.+|+.+++.++||||+++++++.
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   85 (321)
T 2a2a_A            6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE   85 (321)
T ss_dssp             BCSCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cchhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            345678899999999999999999999999999999999976543221   13577999999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC----CeEEeecCc
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG----NLKVTDFGL  164 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~----~vkl~DFGl  164 (441)
                      +.+..|+||||+.|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++    .+||+|||+
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A           86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             cCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence            99999999999999999999976 6789999999999999999999999999999999999999888    799999999


Q ss_pred             cccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC---
Q 013522          165 SAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP---  241 (441)
Q Consensus       165 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~---  241 (441)
                      +.....   .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+.......+   
T Consensus       166 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  241 (321)
T 2a2a_A          166 AHEIED---GVEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF  241 (321)
T ss_dssp             CEECCT---TCCCCCCCSCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHH
T ss_pred             ceecCc---cccccccCCCCCccCcccccCCCC-CCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhh
Confidence            875432   233455679999999999987766 5899999999999999999999999998888888888776665   


Q ss_pred             -CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          242 -PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       242 -~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                       +.+++.+.+||.+||.+||++|||+.++++||||+..
T Consensus       242 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             hcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence             4689999999999999999999999999999999754


No 61 
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=4.4e-51  Score=394.50  Aligned_cols=263  Identities=32%  Similarity=0.571  Sum_probs=238.7

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++++.||+|+||+||+|.+..+++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence            45678999999999999999999999999999999998776555556778999999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccC
Q 013522           96 FAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQD  174 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~  174 (441)
                      +||||+.|++|.+++.. +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++......  .
T Consensus        92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~--~  169 (294)
T 2rku_A           92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--G  169 (294)
T ss_dssp             EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST--T
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC--c
Confidence            99999999999999876 77999999999999999999999999999999999999999999999999998754321  2


Q ss_pred             CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 013522          175 GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITK  254 (441)
Q Consensus       175 ~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  254 (441)
                      ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+....+..+.......|..+++.+.+||.+
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  248 (294)
T 2rku_A          170 ERKKVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK  248 (294)
T ss_dssp             CCBCCCCSCCSSCCHHHHTTSCB-CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHH
T ss_pred             cccccccCCCCcCCcchhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHHH
Confidence            23345679999999999987666 58999999999999999999999999988888889888888999999999999999


Q ss_pred             hcCCCCCCCCCHHHHhcCcccCccCCc
Q 013522          255 LLDPNPNSRIAISKIMESSWFKKSAPK  281 (441)
Q Consensus       255 ~L~~dP~~R~t~~eil~hpwf~~~~~~  281 (441)
                      ||+.||++|||+.++++||||.....+
T Consensus       249 ~l~~~p~~Rps~~~ll~~~~~~~~~~~  275 (294)
T 2rku_A          249 MLQTDPTARPTINELLNDEFFTSGYIP  275 (294)
T ss_dssp             HTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred             HcccChhhCcCHHHHhhChheecCCcC
Confidence            999999999999999999999876543


No 62 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=3.4e-51  Score=411.58  Aligned_cols=258  Identities=28%  Similarity=0.535  Sum_probs=229.6

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      ..+.++|++++.||+|+||+||+|.+..+|+.||+|++.....   .....+.+|+.+|+.++||||+++++++.+...+
T Consensus        47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~  123 (387)
T 1kob_A           47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEM  123 (387)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEE
T ss_pred             CccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch---hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEE
Confidence            3456899999999999999999999999999999999976532   2345788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC--CCCeEEeecCccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE--DGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~--~~~vkl~DFGla~~~~~  170 (441)
                      |+||||+.||+|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++.....
T Consensus       124 ~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~  203 (387)
T 1kob_A          124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  203 (387)
T ss_dssp             EEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             EEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence            999999999999999975  46999999999999999999999999999999999999974  46799999999975432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCCCH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWFSS  246 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~  246 (441)
                         .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+....+.++    ..+++
T Consensus       204 ---~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  279 (387)
T 1kob_A          204 ---DEIVKVTTATAEFAAPEIVDREPV-GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP  279 (387)
T ss_dssp             ---TSCEEEECSSGGGCCHHHHTTCCB-CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCH
T ss_pred             ---CcceeeeccCCCccCchhccCCCC-CCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCH
Confidence               334456689999999999987766 4899999999999999999999999988888888887766544    35799


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          247 EARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ++.+||.+||+.||.+|||+.++++||||+...
T Consensus       280 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          280 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            999999999999999999999999999998654


No 63 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=1e-51  Score=442.96  Aligned_cols=261  Identities=31%  Similarity=0.578  Sum_probs=237.9

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASKSKI   94 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~   94 (441)
                      +..++|++++.||+|+||+||+|++..+++.||||++.+.........+.+..|..++..+ +||||+++++++.+.+.+
T Consensus       338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~  417 (674)
T 3pfq_A          338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL  417 (674)
T ss_dssp             --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred             ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence            4567899999999999999999999999999999999876544444567788999999988 799999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ  173 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~  173 (441)
                      |+||||+.||+|.+++.. +++++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|.....  .
T Consensus       418 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~--~  495 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW--D  495 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC--T
T ss_pred             EEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecccc--C
Confidence            999999999999999986 8899999999999999999999999999999999999999999999999999974322  2


Q ss_pred             CCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 013522          174 DGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLIT  253 (441)
Q Consensus       174 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~  253 (441)
                      .....+.+||+.|+|||++.+..| +.++|||||||+||+|++|.+||.+.+..+++..|......+|..+++++.+||+
T Consensus       496 ~~~~~~~~GT~~Y~APE~l~~~~~-~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~  574 (674)
T 3pfq_A          496 GVTTKTFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK  574 (674)
T ss_dssp             TCCBCCCCSCSSSCCHHHHTCCCB-STHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHHHH
T ss_pred             CcccccccCCCcccCHhhhcCCCC-CccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence            334567899999999999988877 5899999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCCCCH-----HHHhcCcccCccC
Q 013522          254 KLLDPNPNSRIAI-----SKIMESSWFKKSA  279 (441)
Q Consensus       254 ~~L~~dP~~R~t~-----~eil~hpwf~~~~  279 (441)
                      +||+.||.+||++     ++|++||||+...
T Consensus       575 ~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~  605 (674)
T 3pfq_A          575 GLMTKHPGKRLGCGPEGERDIKEHAFFRYID  605 (674)
T ss_dssp             HHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred             HHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence            9999999999998     9999999998643


No 64 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=2.6e-51  Score=392.51  Aligned_cols=255  Identities=37%  Similarity=0.637  Sum_probs=230.8

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      .+.++|++.+.||+|+||+||+|.+..++..+|+|++......   ..+.+.+|+.+++.++||||+++++++.+....|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIY   82 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEE
Confidence            4678999999999999999999999999999999999765432   3568899999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe---CCCCCeEEeecCcccccccc
Q 013522           96 FAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL---DEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl---~~~~~vkl~DFGla~~~~~~  171 (441)
                      +||||+.|++|.+++.. +.+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++....  
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~--  160 (277)
T 3f3z_A           83 LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--  160 (277)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred             EEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc--
Confidence            99999999999998875 779999999999999999999999999999999999999   788899999999987543  


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCC----CCCHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPP----WFSSE  247 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~~~  247 (441)
                       ........+||+.|+|||++.+.  .+.++|||||||++|+|++|..||...+.......+..+....|.    .+++.
T Consensus       161 -~~~~~~~~~~t~~y~aPE~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (277)
T 3f3z_A          161 -PGKMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQ  237 (277)
T ss_dssp             -TTSCBCCCCSCTTTCCHHHHTTC--BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHH
T ss_pred             -CccchhccCCCCCccChHHhccc--CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHH
Confidence             23344567899999999998654  468999999999999999999999999998999999888877765    58999


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          248 ARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       248 ~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      +.+||.+||++||.+|||+.++++||||++.
T Consensus       238 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          238 AESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            9999999999999999999999999999754


No 65 
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=2.9e-51  Score=426.05  Aligned_cols=261  Identities=36%  Similarity=0.625  Sum_probs=229.8

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccch----------hhHHHHHHHHHHHHhCCCCCcceE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKV----------GMMEQIKREISVMKMVKHKHIVEL   84 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~----------~~~~~~~~Ei~il~~l~hpnIv~l   84 (441)
                      ..+.++|++++.||+|+||+||+|++..+++.||+|++.+......          ...+.+.+|+.+|+.++||||+++
T Consensus        32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  111 (504)
T 3q5i_A           32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL  111 (504)
T ss_dssp             SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            3577899999999999999999999999999999999986543221          335678999999999999999999


Q ss_pred             EEEEEeCCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC---CeEEe
Q 013522           85 HEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG---NLKVT  160 (441)
Q Consensus        85 ~~~~~~~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~---~vkl~  160 (441)
                      ++++.+...+|+|||||.||+|.+.+.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+
T Consensus       112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~  191 (504)
T 3q5i_A          112 FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV  191 (504)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred             EEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence            9999999999999999999999999875 7899999999999999999999999999999999999999876   69999


Q ss_pred             ecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCC
Q 013522          161 DFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKC  240 (441)
Q Consensus       161 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~  240 (441)
                      |||+|.....   .......+||+.|+|||++.+ .| +.++|||||||++|+|++|.+||.+.+...+...+..+.+.+
T Consensus       192 Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  266 (504)
T 3q5i_A          192 DFGLSSFFSK---DYKLRDRLGTAYYIAPEVLKK-KY-NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF  266 (504)
T ss_dssp             CCTTCEECCT---TSCBCCCCSCTTTCCHHHHTT-CB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             ECCCCEEcCC---CCccccccCCcCCCCHHHhcc-CC-CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9999976442   334566789999999999874 45 589999999999999999999999999999999999988766


Q ss_pred             C----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          241 P----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       241 ~----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      +    +.+++++++||++||++||.+|||+.++|+||||+....
T Consensus       267 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence            5    468999999999999999999999999999999986543


No 66 
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=4.7e-51  Score=402.45  Aligned_cols=262  Identities=32%  Similarity=0.576  Sum_probs=238.8

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      ..++|++++.||+|+||+||+|++..+++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            45689999999999999999999999999999999987765555667889999999999999999999999999999999


Q ss_pred             EEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522           97 AMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      ||||+.|++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  ..
T Consensus       119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--~~  196 (335)
T 2owb_A          119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GE  196 (335)
T ss_dssp             EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST--TC
T ss_pred             EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC--cc
Confidence            9999999999999876 77999999999999999999999999999999999999999999999999998754321  22


Q ss_pred             cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 013522          176 LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKL  255 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~  255 (441)
                      .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+....+..+.......|..+++.+.+||.+|
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  275 (335)
T 2owb_A          197 RKKVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKM  275 (335)
T ss_dssp             CBCCCCSCCSSCCHHHHHTSCB-CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccCCCccccCHHHhccCCC-CchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHH
Confidence            3445679999999999987766 589999999999999999999999998888888888888899999999999999999


Q ss_pred             cCCCCCCCCCHHHHhcCcccCccCCc
Q 013522          256 LDPNPNSRIAISKIMESSWFKKSAPK  281 (441)
Q Consensus       256 L~~dP~~R~t~~eil~hpwf~~~~~~  281 (441)
                      |+.||++|||+.++++||||.....+
T Consensus       276 l~~dp~~Rps~~ell~~~~~~~~~~~  301 (335)
T 2owb_A          276 LQTDPTARPTINELLNDEFFTSGYIP  301 (335)
T ss_dssp             TCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred             ccCChhHCcCHHHHhcCccccCCCcc
Confidence            99999999999999999999876543


No 67 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=1.2e-51  Score=431.87  Aligned_cols=260  Identities=28%  Similarity=0.476  Sum_probs=233.2

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      +..++|++.+.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+|+.++||||+++++++.+.+.+|
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  260 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC  260 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence            55678999999999999999999999999999999998765444445677889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-C--CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           96 FAMDLVKGGELFNKIAK-G--RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-~--~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      +||||+.||+|.+++.. +  .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|....   
T Consensus       261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~---  337 (576)
T 2acx_A          261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---  337 (576)
T ss_dssp             EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecc---
Confidence            99999999999999975 2  39999999999999999999999999999999999999999999999999997543   


Q ss_pred             cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC----cHHHHHHHHHcCCCCCCCCCCHHH
Q 013522          173 QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD----NIVSMYRKIYRGDFKCPPWFSSEA  248 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~----~~~~~~~~i~~~~~~~~~~~~~~~  248 (441)
                      ........+||+.|+|||++.+..|. .++|||||||++|+|++|..||...    ....+...+......+|..+++++
T Consensus       338 ~~~~~~~~~GT~~Y~APEvl~~~~~~-~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~  416 (576)
T 2acx_A          338 EGQTIKGRVGTVGYMAPEVVKNERYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA  416 (576)
T ss_dssp             TTCCEECCCSCGGGCCHHHHTTCEES-SHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             cCccccccCCCccccCHHHHcCCCCC-ccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHH
Confidence            22334567899999999999887764 8999999999999999999999875    346677778888888899999999


Q ss_pred             HHHHHHhcCCCCCCCC-----CHHHHhcCcccCccC
Q 013522          249 RRLITKLLDPNPNSRI-----AISKIMESSWFKKSA  279 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~-----t~~eil~hpwf~~~~  279 (441)
                      ++||.+||+.||.+||     ++.++++||||+...
T Consensus       417 ~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~  452 (576)
T 2acx_A          417 RSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN  452 (576)
T ss_dssp             HHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred             HHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence            9999999999999999     799999999998643


No 68 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=9.8e-52  Score=408.90  Aligned_cols=253  Identities=32%  Similarity=0.628  Sum_probs=223.1

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASKSK   93 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~   93 (441)
                      ..+.++|++++.||+|+||+||+|.+..+|+.||+|++.+...       ...+|+.++.++ +||||+++++++.+...
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~   90 (342)
T 2qr7_A           18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKY   90 (342)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred             cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE
Confidence            4577899999999999999999999999999999999976543       234688888887 79999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC-C---CeEEeecCccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED-G---NLKVTDFGLSAFS  168 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~-~---~vkl~DFGla~~~  168 (441)
                      +|+||||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||+..+ +   .+||+|||++...
T Consensus        91 ~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             EEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            9999999999999999976 679999999999999999999999999999999999998543 3   4999999999754


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCC---CcHHHHHHHHHcCCCCCC----
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQD---DNIVSMYRKIYRGDFKCP----  241 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~---~~~~~~~~~i~~~~~~~~----  241 (441)
                      ..  ......+.+||+.|+|||++.+.+|+ .++|||||||++|+|++|..||..   .+...+...+..+.+..+    
T Consensus       171 ~~--~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~  247 (342)
T 2qr7_A          171 RA--ENGLLMTPCYTANFVAPEVLERQGYD-AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW  247 (342)
T ss_dssp             BC--TTCCBCCSSCCSSCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTT
T ss_pred             cC--CCCceeccCCCccccCHHHhcCCCCC-CccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccc
Confidence            32  23345678899999999999877664 899999999999999999999975   466778888888877654    


Q ss_pred             CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          242 PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       242 ~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      +.+++++++||++||..||++|||+.++++||||..
T Consensus       248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            458999999999999999999999999999999964


No 69 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.7e-51  Score=397.95  Aligned_cols=260  Identities=25%  Similarity=0.420  Sum_probs=216.5

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      +.++|++++.||+|+||+||+|++..+|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus         1 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (311)
T 4agu_A            1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL   79 (311)
T ss_dssp             --CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CcccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEE
Confidence            35799999999999999999999999999999999866542 23445678899999999999999999999999999999


Q ss_pred             EEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522           97 AMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      ||||+.+++|.+++.. +.+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++.....  ...
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~  157 (311)
T 4agu_A           80 VFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG--PSD  157 (311)
T ss_dssp             EEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             EEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC--ccc
Confidence            9999999999998875 6799999999999999999999999999999999999999999999999999975442  222


Q ss_pred             cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC-------------------
Q 013522          176 LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG-------------------  236 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~-------------------  236 (441)
                      .....+||+.|+|||++.+....+.++|||||||++|+|++|.+||.+.+.......+...                   
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (311)
T 4agu_A          158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS  237 (311)
T ss_dssp             --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred             ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence            3456689999999999987555569999999999999999999999988766555443221                   


Q ss_pred             --CCCCC----------CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          237 --DFKCP----------PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       237 --~~~~~----------~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                        ..+.+          +.+++++.+||.+||++||.+|||+.++++||||++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhcc
Confidence              01111          34788999999999999999999999999999998643


No 70 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=1.2e-51  Score=403.65  Aligned_cols=258  Identities=29%  Similarity=0.473  Sum_probs=207.5

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      .++|++++.||+|+||+||+|.+..+|+.||+|++.....  ......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   81 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV   81 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCST--TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence            4689999999999999999999999999999999976542  22346788999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           98 MDLVKGGELFNKIAK-------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~-------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      |||+.| +|.+++..       ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        82 ~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  160 (317)
T 2pmi_A           82 FEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI  160 (317)
T ss_dssp             EECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred             EEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence            999985 89988864       3489999999999999999999999999999999999999999999999999975432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--CC----------
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--DF----------  238 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~~----------  238 (441)
                        ........+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+...  ..          
T Consensus       161 --~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  238 (317)
T 2pmi_A          161 --PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK  238 (317)
T ss_dssp             --CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred             --CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence              1223456689999999999987555568999999999999999999999998877766665431  00          


Q ss_pred             ----------------------CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          239 ----------------------KCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       239 ----------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                                            ..+..+++++.+||.+||++||++|||+.++++||||++...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence                                  011246889999999999999999999999999999987543


No 71 
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=4.5e-51  Score=398.23  Aligned_cols=262  Identities=32%  Similarity=0.600  Sum_probs=219.2

Q ss_pred             CccccCCeEEe-eeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 013522           14 PTLLHGKYELG-RMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASK   91 (441)
Q Consensus        14 ~~~~~~~y~i~-~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~   91 (441)
                      ...+.++|++. +.||+|+||+||+|++..+++.||+|++.....   .....+.+|+.+++++ +||||+++++++.+.
T Consensus         7 ~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~   83 (316)
T 2ac3_A            7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEE   83 (316)
T ss_dssp             CCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             CcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence            34577899995 789999999999999999999999999976532   3356788999999985 799999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC---eEEeecCcccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN---LKVTDFGLSAF  167 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~---vkl~DFGla~~  167 (441)
                      +.+|+||||+.|++|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.   +||+|||++..
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             CEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence            999999999999999999976 77999999999999999999999999999999999999998776   99999999875


Q ss_pred             cccccc-----CCcccccccCCCccchhhhhc-----cCCCCCcccHHHHHHHHHHHhhCCCCCCCCc------------
Q 013522          168 SEHLKQ-----DGLLHTTCGTPAYVAPEVISK-----KGYDGAKADIWSCGVILYVLLAGFLPFQDDN------------  225 (441)
Q Consensus       168 ~~~~~~-----~~~~~~~~gt~~y~APE~l~~-----~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~------------  225 (441)
                      ......     .......+||+.|+|||++.+     ..+ +.++|||||||++|+|++|..||.+.+            
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  242 (316)
T 2ac3_A          164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY-DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC  242 (316)
T ss_dssp             ------------------CCSGGGCCHHHHHHTSHHHHHH-TTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred             cccCCccccccccccccccCCcCccChHHhhcccccccCC-CcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence            432111     122345679999999999975     334 488999999999999999999997753            


Q ss_pred             ---HHHHHHHHHcCCCCCC----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          226 ---IVSMYRKIYRGDFKCP----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       226 ---~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                         ...+...+..+...+|    ..+++.+++||.+||+.||.+|||+.++++||||+...
T Consensus       243 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             HHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             hhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence               2456677777777766    35899999999999999999999999999999998643


No 72 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.2e-51  Score=405.77  Aligned_cols=262  Identities=28%  Similarity=0.437  Sum_probs=212.7

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      .....++|++++.||+|+||+||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR  107 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTE
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE
Confidence            45677899999999999999999999999999999999976543 22345667899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC-----CCCCeEEeecCcccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD-----EDGNLKVTDFGLSAF  167 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~-----~~~~vkl~DFGla~~  167 (441)
                      +|+||||+.| +|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++     .++.+||+|||++..
T Consensus       108 ~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          108 LHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             EEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence            9999999985 99999876 6799999999999999999999999999999999999994     445599999999976


Q ss_pred             ccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--CCCC-----
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--DFKC-----  240 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~~~~-----  240 (441)
                      ...  ........+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+...  .+..     
T Consensus       187 ~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (329)
T 3gbz_A          187 FGI--PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG  264 (329)
T ss_dssp             HC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             cCC--cccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhh
Confidence            442  1233455678999999999987665579999999999999999999999998877766665432  1100     


Q ss_pred             ----C-------------------CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          241 ----P-------------------PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       241 ----~-------------------~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                          +                   ..+++++.+||.+||++||++|||+.++++||||+...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence                0                   11678999999999999999999999999999998653


No 73 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=2.7e-51  Score=427.68  Aligned_cols=261  Identities=27%  Similarity=0.456  Sum_probs=233.2

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      +..++|++.+.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+|+.++||||+++++++.+.+.+|
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  261 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC  261 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence            45578999999999999999999999999999999998765544445678889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           96 FAMDLVKGGELFNKIAK-----GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-----~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      +||||+.||+|.+++..     ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus       262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            99999999999999864     3599999999999999999999999999999999999999999999999999975432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC----cHHHHHHHHHcCCCCCCCCCCH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD----NIVSMYRKIYRGDFKCPPWFSS  246 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~----~~~~~~~~i~~~~~~~~~~~~~  246 (441)
                      .  .....+.+||+.|+|||++.+..|+ .++|||||||++|+|++|.+||.+.    +...+...+......+|+.+++
T Consensus       342 ~--~~~~~~~~GT~~Y~APE~l~~~~~~-~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~  418 (543)
T 3c4z_A          342 G--QTKTKGYAGTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSP  418 (543)
T ss_dssp             T--CCCBCCCCSCTTTSCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCH
T ss_pred             C--CcccccccCCccccChhhhcCCCCC-hHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCH
Confidence            1  2223456899999999999887774 8999999999999999999999875    4567788888888889999999


Q ss_pred             HHHHHHHHhcCCCCCCCCC-----HHHHhcCcccCccC
Q 013522          247 EARRLITKLLDPNPNSRIA-----ISKIMESSWFKKSA  279 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t-----~~eil~hpwf~~~~  279 (441)
                      ++.+||.+||+.||.+||+     +++|++||||+...
T Consensus       419 ~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~  456 (543)
T 3c4z_A          419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS  456 (543)
T ss_dssp             HHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred             HHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCC
Confidence            9999999999999999996     58999999998643


No 74 
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=9.8e-52  Score=395.61  Aligned_cols=259  Identities=32%  Similarity=0.654  Sum_probs=206.2

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      .++|++.+.||+|+||+||+|++..+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            46799999999999999999999999999999999765443334467899999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522           98 MDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      |||+.+++|.+++..  +.+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++......  ..
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~--~~  167 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP--HE  167 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC--CC
Confidence            999999999999976  56999999999999999999999999999999999999999999999999998754322  12


Q ss_pred             cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 013522          176 LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKL  255 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~  255 (441)
                      .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+.......|..+++++.+||.+|
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  246 (278)
T 3cok_A          168 KHYTLCGTPNYISPEIATRSAH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQL  246 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHHH
T ss_pred             cceeccCCCCcCCcchhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHHH
Confidence            2345679999999999987665 589999999999999999999999877666666666667778888999999999999


Q ss_pred             cCCCCCCCCCHHHHhcCcccCccC
Q 013522          256 LDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       256 L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      |..||++|||+.++++||||....
T Consensus       247 l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          247 LRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             SCSSGGGSCCHHHHTTSTTTC---
T ss_pred             cccCHhhCCCHHHHhcCccccCCC
Confidence            999999999999999999997543


No 75 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.8e-51  Score=425.67  Aligned_cols=261  Identities=34%  Similarity=0.627  Sum_probs=229.6

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      ...+.++|++++.||+|+||+||+|++..+++.||+|++.+..... .....+.+|+.+|+.++||||+++++++.+...
T Consensus        17 ~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   95 (486)
T 3mwu_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSS   95 (486)
T ss_dssp             CCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCE
Confidence            4468899999999999999999999999999999999997654322 335788999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC---CCCCeEEeecCcccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD---EDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~---~~~~vkl~DFGla~~~~  169 (441)
                      +|+|||||.||+|.+.+.. +.+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+|....
T Consensus        96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A           96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            9999999999999998865 7899999999999999999999999999999999999995   45579999999997543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCCC
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWFS  245 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~  245 (441)
                      .   .......+||+.|+|||++.+ .| +.++|||||||++|+|++|.+||.+.+...+...+..+.+.++    ..++
T Consensus       176 ~---~~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  250 (486)
T 3mwu_A          176 Q---NTKMKDRIGTAYYIAPEVLRG-TY-DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTIS  250 (486)
T ss_dssp             C---C----CCTTGGGGCCGGGGGS-CC-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSC
T ss_pred             C---CCccCCCcCCCCCCCHHHhCC-CC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCC
Confidence            2   234456789999999999875 35 5899999999999999999999999999999999988876543    2479


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      +++++||.+||.+||.+|||+.++|+||||+....
T Consensus       251 ~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence            99999999999999999999999999999986543


No 76 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.3e-50  Score=397.23  Aligned_cols=254  Identities=25%  Similarity=0.463  Sum_probs=225.7

Q ss_pred             CeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEEEe
Q 013522           20 KYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMD   99 (441)
Q Consensus        20 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv~E   99 (441)
                      .|+..+.||+|+||+||+|++..+|+.||||++.....   ...+.+.+|+.+++.++||||+++++++...+..|+|||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  122 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME  122 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence            48899999999999999999999999999999976543   235678899999999999999999999999999999999


Q ss_pred             ccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCcccc
Q 013522          100 LVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHT  179 (441)
Q Consensus       100 ~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~  179 (441)
                      |+.|++|.+++...++++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++......  ......
T Consensus       123 ~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~~  200 (321)
T 2c30_A          123 FLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKS  200 (321)
T ss_dssp             CCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS--SCCBCC
T ss_pred             cCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccC--cccccc
Confidence            999999999998888999999999999999999999999999999999999999999999999998754331  223345


Q ss_pred             cccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCC---CCCCCCHHHHHHHHHhc
Q 013522          180 TCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFK---CPPWFSSEARRLITKLL  256 (441)
Q Consensus       180 ~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~li~~~L  256 (441)
                      .+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+.....+   .+..+++.+.+||.+||
T Consensus       201 ~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  279 (321)
T 2c30_A          201 LVGTPYWMAPEVISRSLY-ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERML  279 (321)
T ss_dssp             CCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHS
T ss_pred             ccCCccccCHhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHc
Confidence            689999999999987766 48999999999999999999999998887777777665432   23457899999999999


Q ss_pred             CCCCCCCCCHHHHhcCcccCccC
Q 013522          257 DPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       257 ~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      +.||++|||+.++++||||....
T Consensus       280 ~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          280 VRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             CSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             cCChhhCcCHHHHhcChhhccCC
Confidence            99999999999999999997644


No 77 
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=4.9e-51  Score=389.83  Aligned_cols=261  Identities=34%  Similarity=0.616  Sum_probs=227.3

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      +.++|++++.||+|+||+||+|.+..+++.||+|++......  ...+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   82 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence            567899999999999999999999999999999999765432  345788999999999999999999999999999999


Q ss_pred             EEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522           97 AMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      ||||+.|++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..........
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence            9999999999999976 579999999999999999999999999999999999999999999999999997654433334


Q ss_pred             cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHHcCCCCCC--CCCCHHHHHHH
Q 013522          176 LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV-SMYRKIYRGDFKCP--PWFSSEARRLI  252 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~--~~~~~~~~~li  252 (441)
                      .....+||+.|+|||++.+..+.+.++|||||||++|+|++|..||...+.. ..+..+.......+  ..+++.+.+||
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (276)
T 2yex_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL  242 (276)
T ss_dssp             CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHH
T ss_pred             cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHH
Confidence            4556789999999999988777668899999999999999999999876543 33344444333333  35899999999


Q ss_pred             HHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          253 TKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       253 ~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      .+||..||++|||+.++++||||+...
T Consensus       243 ~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (276)
T 2yex_A          243 HKILVENPSARITIPDIKKDRWYNKPL  269 (276)
T ss_dssp             HHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HHHCCCCchhCCCHHHHhcCccccChh
Confidence            999999999999999999999998654


No 78 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=4.5e-51  Score=397.21  Aligned_cols=261  Identities=26%  Similarity=0.436  Sum_probs=214.3

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeeccccc--chhhHHHHHHHHHHHHhCC---CCCcceEEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVI--KVGMMEQIKREISVMKMVK---HKHIVELHEVM   88 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~   88 (441)
                      +.++.++|++++.||+|+||+||+|++..+++.||+|++......  .......+.+|+.+++.++   ||||+++++++
T Consensus         4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~   83 (308)
T 3g33_A            4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC   83 (308)
T ss_dssp             ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred             CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence            456788999999999999999999999999999999999754321  1112345678888877764   99999999999


Q ss_pred             EeCC-----EEEEEEeccCCCchHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEe
Q 013522           89 ASKS-----KIYFAMDLVKGGELFNKIAKG---RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVT  160 (441)
Q Consensus        89 ~~~~-----~~~lv~E~~~gg~L~~~i~~~---~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~  160 (441)
                      ....     .+++||||+.| +|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           84 ATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             EECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred             eccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEe
Confidence            8765     68999999975 999999763   38999999999999999999999999999999999999999999999


Q ss_pred             ecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCC--C
Q 013522          161 DFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGD--F  238 (441)
Q Consensus       161 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~--~  238 (441)
                      |||++.....   .......+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+......++....  .
T Consensus       163 Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  238 (308)
T 3g33_A          163 DFGLARIYSY---QMALTPVVVTLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP  238 (308)
T ss_dssp             SCSCTTTSTT---CCCSGGGGCCCSSCCHHHHHTSCC-CSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             eCccccccCC---CcccCCccccccccCchHHcCCCC-CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            9999975432   334456789999999999988777 489999999999999999999999988877776664321  0


Q ss_pred             C-------------------------CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          239 K-------------------------CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       239 ~-------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      +                         ..+.+++.+.+||.+||++||++|||+.++|+||||++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            0                         1134788999999999999999999999999999998643


No 79 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.8e-51  Score=423.23  Aligned_cols=257  Identities=27%  Similarity=0.469  Sum_probs=213.7

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC----
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK----   91 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----   91 (441)
                      .+.++|++++.||+|+||+||+|++..+|+.||||++.+.. ........+.+|+.+|+.++||||+++++++...    
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~  137 (464)
T 3ttj_A           59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE  137 (464)
T ss_dssp             EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred             eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc
Confidence            35689999999999999999999999999999999997653 2334567889999999999999999999999654    


Q ss_pred             --CEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           92 --SKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        92 --~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                        ..+|+||||+.+ +|.+.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus       138 ~~~~~~lv~E~~~~-~l~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  215 (464)
T 3ttj_A          138 EFQDVYLVMELMDA-NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  215 (464)
T ss_dssp             TCCEEEEEEECCSE-EHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred             cCCeEEEEEeCCCC-CHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence              468999999976 57776654 49999999999999999999999999999999999999999999999999997543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC-------------
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG-------------  236 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~-------------  236 (441)
                      .   .......+||+.|+|||++.+..|+ .++|||||||++|+|++|++||.+.+....+.++.+.             
T Consensus       216 ~---~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~  291 (464)
T 3ttj_A          216 T---SFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ  291 (464)
T ss_dssp             ----CCCC----CCCTTCCHHHHTTCCCC-TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred             C---CcccCCCcccccccCHHHHcCCCCC-HHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence            2   3345667899999999999988775 8999999999999999999999998877766665431             


Q ss_pred             ---------C-----CCCCCCC---------------CHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          237 ---------D-----FKCPPWF---------------SSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       237 ---------~-----~~~~~~~---------------~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                               .     ..++..+               ++++++||.+||.+||++|||++|+|+||||+...
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~  363 (464)
T 3ttj_A          292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  363 (464)
T ss_dssp             HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhcc
Confidence                     0     0001001               46799999999999999999999999999998543


No 80 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=3.4e-51  Score=424.48  Aligned_cols=256  Identities=36%  Similarity=0.631  Sum_probs=223.6

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      .+.++|++++.||+|+||+||+|++..++..||+|++.+..... .....+.+|+.+++.++||||+++++++.+...+|
T Consensus        34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  112 (494)
T 3lij_A           34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY  112 (494)
T ss_dssp             CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            45668999999999999999999999999999999998765332 23567889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC---CCeEEeecCcccccccc
Q 013522           96 FAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED---GNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~---~~vkl~DFGla~~~~~~  171 (441)
                      +|||||.||+|.+.+.. +.+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+||+|||+|..... 
T Consensus       113 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~-  191 (494)
T 3lij_A          113 LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN-  191 (494)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT-
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC-
Confidence            99999999999998865 789999999999999999999999999999999999999764   4599999999976543 


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCCCHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWFSSE  247 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~  247 (441)
                        .......+||+.|+|||++.+ .| +.++|||||||++|+|++|.+||.+.+...+...+..+.+.++    +.+++.
T Consensus       192 --~~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  267 (494)
T 3lij_A          192 --QKKMKERLGTAYYIAPEVLRK-KY-DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEG  267 (494)
T ss_dssp             --TBCBCCCCSCTTTCCHHHHTT-CB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHH
T ss_pred             --CccccccCCCcCeeCHHHHcc-cC-CCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHH
Confidence              233456789999999999864 45 5899999999999999999999999999999999988876654    248999


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          248 ARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       248 ~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      +++||.+||++||.+|||+.++|+||||+.
T Consensus       268 ~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          268 AKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             HHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence            999999999999999999999999999975


No 81 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-51  Score=409.47  Aligned_cols=257  Identities=25%  Similarity=0.396  Sum_probs=216.7

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC----
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK----   91 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----   91 (441)
                      .+.++|++.+.||+|+||+||+|.+..+|+.||||++.... ......+.+.+|+.+|+.++||||+++++++...    
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~  100 (367)
T 1cm8_A           22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD  100 (367)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT
T ss_pred             eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccc
Confidence            35689999999999999999999999999999999996543 2334567889999999999999999999999765    


Q ss_pred             --CEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           92 --SKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        92 --~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                        ..+|+||||+ |++|.+++..+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       101 ~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          101 DFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             TCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             cCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence              3569999999 8899999998889999999999999999999999999999999999999999999999999997543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC-----------
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF-----------  238 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~-----------  238 (441)
                      .     .....+||++|+|||++.+....+.++||||+||++|+|++|+.||.+.+....+..+.....           
T Consensus       180 ~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~  254 (367)
T 1cm8_A          180 S-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ  254 (367)
T ss_dssp             S-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred             c-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence            2     244568999999999998744456899999999999999999999999887766655533100           


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          239 --------------------KCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       239 --------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                          ...+..++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence                                12245689999999999999999999999999999998643


No 82 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=7.1e-51  Score=403.76  Aligned_cols=256  Identities=37%  Similarity=0.656  Sum_probs=210.1

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      ..+.++|++.+.||+|+||+||+|++..+++.||+|++....     ..+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  123 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEI  123 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeE
Confidence            456788999999999999999999999999999999997543     235688999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC---CCCeEEeecCccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE---DGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~---~~~vkl~DFGla~~~~~  170 (441)
                      |+||||+.|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.   ++.+||+|||++.....
T Consensus       124 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          124 SLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             EEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence            999999999999999976 67999999999999999999999999999999999999975   88999999999875432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHHcCCCCCC----CCCC
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV-SMYRKIYRGDFKCP----PWFS  245 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~----~~~~  245 (441)
                         .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... ..+..+.......+    +.++
T Consensus       204 ---~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  279 (349)
T 2w4o_A          204 ---QVLMKTVCGTPGYCAPEILRGCAY-GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS  279 (349)
T ss_dssp             ------------CGGGSCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSC
T ss_pred             ---ccccccccCCCCccCHHHhcCCCC-CcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCC
Confidence               233456789999999999987766 58999999999999999999999776544 46677777655443    3578


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      +++.+||.+||..||++|||+.++++||||....
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          280 LNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999999999999999998643


No 83 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=2e-51  Score=403.68  Aligned_cols=254  Identities=37%  Similarity=0.701  Sum_probs=204.7

Q ss_pred             ccCCeEEe---eeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC
Q 013522           17 LHGKYELG---RMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-HKHIVELHEVMASKS   92 (441)
Q Consensus        17 ~~~~y~i~---~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~   92 (441)
                      +.++|++.   +.||+|+||+||+|.+..+++.||+|++.+.      ....+.+|+.+++.+. ||||+++++++.+..
T Consensus         6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~   79 (325)
T 3kn6_A            6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL   79 (325)
T ss_dssp             HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence            45678886   7899999999999999999999999999654      2457789999999997 999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC---CeEEeecCccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG---NLKVTDFGLSAFS  168 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~---~vkl~DFGla~~~  168 (441)
                      ..|+||||+.||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||++...
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~  159 (325)
T 3kn6_A           80 HTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK  159 (325)
T ss_dssp             EEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred             EEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence            99999999999999999976 6799999999999999999999999999999999999998766   7999999999754


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCc-------HHHHHHHHHcCCCCCC
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDN-------IVSMYRKIYRGDFKCP  241 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~-------~~~~~~~i~~~~~~~~  241 (441)
                      ..  ......+.+||+.|+|||++.+..++ .++|||||||++|+|++|..||...+       .......+..+.+.++
T Consensus       160 ~~--~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~  236 (325)
T 3kn6_A          160 PP--DNQPLKTPCFTLHYAAPELLNQNGYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE  236 (325)
T ss_dssp             CC------------------------CCCC-HHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC
T ss_pred             CC--CCCcccccCCCcCccCHHHhcCCCCC-CccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC
Confidence            32  22345567899999999999887774 89999999999999999999997643       3567788888877665


Q ss_pred             C----CCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          242 P----WFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       242 ~----~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      .    .+++++++||.+||.+||.+|||+.++++||||+...
T Consensus       237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred             cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence            3    4899999999999999999999999999999998643


No 84 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.1e-50  Score=390.56  Aligned_cols=257  Identities=32%  Similarity=0.587  Sum_probs=221.6

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      +..+.++|++.+.||+|+||+||+|.+..++..+|+|++......  ...+.+.+|+.+++.++||||+++++++.+...
T Consensus        17 ~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   94 (285)
T 3is5_A           17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHN   94 (285)
T ss_dssp             SSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             CCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc--hhHHHHHHHHHHHHhCCCchHHhHHHheecCCe
Confidence            345788999999999999999999999999999999999765432  235788999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe---CCCCCeEEeecCcc
Q 013522           94 IYFAMDLVKGGELFNKIAK-----GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL---DEDGNLKVTDFGLS  165 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-----~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl---~~~~~vkl~DFGla  165 (441)
                      .|+||||+.|++|.+.+..     ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A           95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred             EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence            9999999999999998853     579999999999999999999999999999999999999   45678999999999


Q ss_pred             ccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC---C
Q 013522          166 AFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP---P  242 (441)
Q Consensus       166 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~---~  242 (441)
                      .....   .......+||+.|+|||++.+ .+ +.++|||||||++|+|++|..||.+.+.......+.......+   .
T Consensus       175 ~~~~~---~~~~~~~~~t~~y~aPE~~~~-~~-~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  249 (285)
T 3is5_A          175 ELFKS---DEHSTNAAGTALYMAPEVFKR-DV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECR  249 (285)
T ss_dssp             CC-------------CTTGGGCCHHHHTT-CC-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--C
T ss_pred             eecCC---cccCcCcccccCcCChHHhcc-CC-CcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccC
Confidence            75443   233456679999999999864 44 5899999999999999999999999988887777766554443   2


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          243 WFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       243 ~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      .+++++.+||.+||++||++|||+.++++||||++
T Consensus       250 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          250 PLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             CCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            37899999999999999999999999999999975


No 85 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.9e-51  Score=404.46  Aligned_cols=264  Identities=33%  Similarity=0.538  Sum_probs=224.3

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeeccccc--chhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVI--KVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      .+.++|++++.||+|+||+||+|++..+++.||+|++.+....  .....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence            4678999999999999999999999999999999999765432  23456789999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-----------------------------------------CCCCHHHHHHHHHHHHHHHH
Q 013522           94 IYFAMDLVKGGELFNKIAK-----------------------------------------GRLREDVARVYFQQLISAVD  132 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-----------------------------------------~~l~~~~~~~~~~qll~aL~  132 (441)
                      .|+||||++||+|.+++..                                         ..+++..++.++.||+.||+
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  182 (345)
T 3hko_A          103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH  182 (345)
T ss_dssp             EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence            9999999999999998851                                         12367888999999999999


Q ss_pred             HHhhcCcEeccCCCCcEEeCCCC--CeEEeecCccccccccccCC--cccccccCCCccchhhhhcc-CCCCCcccHHHH
Q 013522          133 FCHSRGVYHRDLKPENLLLDEDG--NLKVTDFGLSAFSEHLKQDG--LLHTTCGTPAYVAPEVISKK-GYDGAKADIWSC  207 (441)
Q Consensus       133 ylH~~gi~HrDLkp~NILl~~~~--~vkl~DFGla~~~~~~~~~~--~~~~~~gt~~y~APE~l~~~-~~~~~~~DiwSl  207 (441)
                      |||++||+||||||+|||++.++  .+||+|||++..........  .....+||+.|+|||++.+. ...+.++|||||
T Consensus       183 ~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl  262 (345)
T 3hko_A          183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA  262 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred             HHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence            99999999999999999998777  89999999998654322221  24566799999999999752 334589999999


Q ss_pred             HHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          208 GVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPP----WFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       208 Gvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ||++|+|++|..||.+.+.......+.......+.    .+++++.+||.+||++||.+|||+.++++||||+...
T Consensus       263 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          263 GVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             HHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            99999999999999999888888888777654432    3789999999999999999999999999999998654


No 86 
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=1e-50  Score=402.10  Aligned_cols=263  Identities=27%  Similarity=0.375  Sum_probs=221.4

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe-----
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS-----   90 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----   90 (441)
                      ...++|++++.||+|+||+||+|++..+|+.||+|++...... ......+.+|+.+++.++||||+++++++..     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKASPY   92 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred             ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence            3568999999999999999999999999999999999765432 2334567799999999999999999999977     


Q ss_pred             ---CCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcc
Q 013522           91 ---KSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLS  165 (441)
Q Consensus        91 ---~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla  165 (441)
                         .+.+|+||||+.| +|.+.+..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        93 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           93 NRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             ----CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence               4578999999976 77777765  67999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc--cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCC
Q 013522          166 AFSEHLK--QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPW  243 (441)
Q Consensus       166 ~~~~~~~--~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~  243 (441)
                      .......  ........+||+.|+|||++.+....+.++|||||||++|+|++|.+||.+.+.......+.......++.
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  251 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  251 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence            7654222  22334566799999999999876555799999999999999999999999988877766664422111111


Q ss_pred             --------------------------------CCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          244 --------------------------------FSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       244 --------------------------------~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                                                      .++.+.+||.+||+.||++|||+.++++||||+....
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM  320 (351)
T ss_dssp             TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSC
T ss_pred             hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCC
Confidence                                            2677999999999999999999999999999986543


No 87 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=2.5e-50  Score=411.09  Aligned_cols=264  Identities=28%  Similarity=0.438  Sum_probs=212.6

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC---
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK---   91 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~---   91 (441)
                      -.+.++|++++.||+|+||+||+|++..+++.||||++.... ......+.+.+|+.+|+.++||||+++++++...   
T Consensus        22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  100 (432)
T 3n9x_A           22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLL  100 (432)
T ss_dssp             CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT
T ss_pred             ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCC
Confidence            457889999999999999999999999999999999997543 2334567899999999999999999999999766   


Q ss_pred             --CEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           92 --SKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        92 --~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                        ..+|+||||+. ++|.+.+.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus       101 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~  179 (432)
T 3n9x_A          101 KFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI  179 (432)
T ss_dssp             TCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence              57999999996 599999987 56999999999999999999999999999999999999999999999999999865


Q ss_pred             cccccC--------------------CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhC-----------
Q 013522          169 EHLKQD--------------------GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAG-----------  217 (441)
Q Consensus       169 ~~~~~~--------------------~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G-----------  217 (441)
                      ......                    ......+||++|+|||++......+.++|||||||++|+|++|           
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~  259 (432)
T 3n9x_A          180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR  259 (432)
T ss_dssp             -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGC
T ss_pred             cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccc
Confidence            432211                    2346778999999999976555556999999999999999984           


Q ss_pred             CCCCCCCcH-----------------HHHHH------------------------HHHcCCCCCC-------CCCCHHHH
Q 013522          218 FLPFQDDNI-----------------VSMYR------------------------KIYRGDFKCP-------PWFSSEAR  249 (441)
Q Consensus       218 ~~Pf~~~~~-----------------~~~~~------------------------~i~~~~~~~~-------~~~~~~~~  249 (441)
                      .++|.+.+.                 .....                        .+.......+       +.+++++.
T Consensus       260 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  339 (432)
T 3n9x_A          260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGI  339 (432)
T ss_dssp             CCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHH
T ss_pred             cccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHH
Confidence            444444320                 11111                        1111111111       45799999


Q ss_pred             HHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          250 RLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       250 ~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      +||++||+.||++|||++++|+||||+....
T Consensus       340 dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          340 NLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             HHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence            9999999999999999999999999986543


No 88 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1e-50  Score=403.36  Aligned_cols=253  Identities=25%  Similarity=0.442  Sum_probs=219.3

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-----CCCcceEEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-----HKHIVELHEV   87 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-----hpnIv~l~~~   87 (441)
                      .+.++.++|++++.||+|+||+||+|++..+++.||+|++....    .......+|+.+++.+.     ||||++++++
T Consensus        29 ~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~  104 (360)
T 3llt_A           29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK----KYTRSAKIEADILKKIQNDDINNNNIVKYHGK  104 (360)
T ss_dssp             TTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH----HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred             cceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch----hhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence            45678899999999999999999999999999999999996432    33567788999999996     9999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC-----------
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIAKG---RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE-----------  153 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~~~---~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~-----------  153 (441)
                      +...+..|+||||+ |++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.           
T Consensus       105 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~  183 (360)
T 3llt_A          105 FMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVR  183 (360)
T ss_dssp             EEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred             eeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchh
Confidence            99999999999999 88999999763   4999999999999999999999999999999999999975           


Q ss_pred             --------------CCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCC
Q 013522          154 --------------DGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFL  219 (441)
Q Consensus       154 --------------~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~  219 (441)
                                    ++.+||+|||+|.....     .....+||+.|+|||++.+..+. .++|||||||++|+|++|..
T Consensus       184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~  257 (360)
T 3llt_A          184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVILNLGWD-VSSDMWSFGCVLAELYTGSL  257 (360)
T ss_dssp             CTTTCCEEEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHHTTCCCC-TTHHHHHHHHHHHHHHHSSC
T ss_pred             cccccccccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCcHHHcCCCCC-CccchHHHHHHHHHHHHCCC
Confidence                          78899999999975332     23456799999999999888774 89999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHcCCCCCCC----------------------------------------------CCCHHHHHHHH
Q 013522          220 PFQDDNIVSMYRKIYRGDFKCPP----------------------------------------------WFSSEARRLIT  253 (441)
Q Consensus       220 Pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~li~  253 (441)
                      ||...+.......+.....+.|.                                              ..++.+.+||.
T Consensus       258 pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  337 (360)
T 3llt_A          258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY  337 (360)
T ss_dssp             SCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHH
Confidence            99988777666655443222221                                              12367889999


Q ss_pred             HhcCCCCCCCCCHHHHhcCcccC
Q 013522          254 KLLDPNPNSRIAISKIMESSWFK  276 (441)
Q Consensus       254 ~~L~~dP~~R~t~~eil~hpwf~  276 (441)
                      +||++||.+|||+.++|+||||+
T Consensus       338 ~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          338 SILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHhcCChhhCCCHHHHhcCcccC
Confidence            99999999999999999999995


No 89 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=6.6e-51  Score=418.26  Aligned_cols=262  Identities=26%  Similarity=0.430  Sum_probs=200.5

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe-----
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS-----   90 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----   90 (441)
                      .+.++|++++.||+|+||+||+|++..+++.||||++.+.. ......+++.+|+.+|+.++||||+++++++..     
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  128 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK  128 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc
Confidence            45689999999999999999999999999999999996543 233456788999999999999999999999843     


Q ss_pred             CCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      ...+|+||||+ +++|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus       129 ~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          129 FDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             CCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             CceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence            35799999998 5689999886 679999999999999999999999999999999999999999999999999998654


Q ss_pred             ccccC-------------------------CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh--------
Q 013522          170 HLKQD-------------------------GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA--------  216 (441)
Q Consensus       170 ~~~~~-------------------------~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~--------  216 (441)
                      .....                         ......+||++|+|||++......+.++|||||||+||+|++        
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~  287 (458)
T 3rp9_A          208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY  287 (458)
T ss_dssp             SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred             CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence            22111                         134566899999999987655545699999999999999998        


Q ss_pred             ---CCCCCCCCcH--------------------HHHHHHHHc--CC--------------------C---------CCCC
Q 013522          217 ---GFLPFQDDNI--------------------VSMYRKIYR--GD--------------------F---------KCPP  242 (441)
Q Consensus       217 ---G~~Pf~~~~~--------------------~~~~~~i~~--~~--------------------~---------~~~~  242 (441)
                         |.+||.+.+.                    ......+..  +.                    .         ...+
T Consensus       288 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (458)
T 3rp9_A          288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFP  367 (458)
T ss_dssp             GGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGST
T ss_pred             cccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCC
Confidence               7777766431                    111111110  00                    0         0123


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          243 WFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       243 ~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ..++++.+||++||..||++|||++++|+||||+...
T Consensus       368 ~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          368 ASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence            4689999999999999999999999999999998654


No 90 
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.6e-51  Score=406.06  Aligned_cols=255  Identities=31%  Similarity=0.543  Sum_probs=224.5

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccch-----hhHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKV-----GMMEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~-----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      .+.++|++.+.||+|+||+||+|++..+++.||+|++........     .....+.+|+.+++.++||||+++++++.+
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            466899999999999999999999999999999999987653221     123456789999999999999999999999


Q ss_pred             CCEEEEEEeccCCC-chHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           91 KSKIYFAMDLVKGG-ELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        91 ~~~~~lv~E~~~gg-~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                      .+..++||||+.+| +|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus       101 ~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~  180 (335)
T 3dls_A          101 QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL  180 (335)
T ss_dssp             SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence            99999999999776 99999986 57999999999999999999999999999999999999999999999999999754


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHH
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEA  248 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  248 (441)
                      ..   .....+.+||+.|+|||++.+..+.+.++|||||||++|+|++|..||.....      ........|..+++++
T Consensus       181 ~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~l  251 (335)
T 3dls_A          181 ER---GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEAAIHPPYLVSKEL  251 (335)
T ss_dssp             CT---TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTTCCCCSSCCCHHH
T ss_pred             CC---CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhhccCCCcccCHHH
Confidence            32   33445678999999999999888877899999999999999999999976432      2334455677789999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          249 RRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      .+||.+||++||++|||+.++++||||+...
T Consensus       252 ~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          252 MSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence            9999999999999999999999999998644


No 91 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=1.6e-50  Score=403.16  Aligned_cols=260  Identities=25%  Similarity=0.427  Sum_probs=222.2

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK-----   91 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----   91 (441)
                      +.++|++++.||+|+||+||+|++..+++.||+|++....  .......+.+|+.+++.++||||+++++++...     
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  102 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM  102 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence            3479999999999999999999999999999999997432  234457888999999999999999999999765     


Q ss_pred             CEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      ...|+||||+.| +|.+++..+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus       103 ~~~~iv~e~~~~-~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  181 (364)
T 3qyz_A          103 KDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  181 (364)
T ss_dssp             CCEEEEEECCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             ceEEEEEcccCc-CHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence            478999999975 9999999888999999999999999999999999999999999999999999999999999865433


Q ss_pred             cc-CCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--CC----------
Q 013522          172 KQ-DGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--DF----------  238 (441)
Q Consensus       172 ~~-~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~~----------  238 (441)
                      .. .......+||+.|+|||++.+....+.++|||||||++|+|++|.+||.+.+.......+...  .+          
T Consensus       182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  261 (364)
T 3qyz_A          182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN  261 (364)
T ss_dssp             GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence            22 223456689999999999876665569999999999999999999999887766555544321  00          


Q ss_pred             --------------C-----CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          239 --------------K-----CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       239 --------------~-----~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                    .     .++.+++++.+||.+||++||++|||+.++|+||||+...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence                          0     1245789999999999999999999999999999998754


No 92 
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=4.6e-51  Score=395.95  Aligned_cols=264  Identities=33%  Similarity=0.621  Sum_probs=228.6

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccc-hhhHHHHHHHHHHHHhCCCCCcceEEEEE--EeCC
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIK-VGMMEQIKREISVMKMVKHKHIVELHEVM--ASKS   92 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~--~~~~   92 (441)
                      .+.++|++++.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.++||||+++++++  .+..
T Consensus         2 ~l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (305)
T 2wtk_C            2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ   81 (305)
T ss_dssp             ---CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred             ccccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence            36789999999999999999999999999999999997654321 23457899999999999999999999998  4456


Q ss_pred             EEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      ..|+||||+.++ |.+.+..   +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C           82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            899999999886 6666653   679999999999999999999999999999999999999999999999999997654


Q ss_pred             ccccCCcccccccCCCccchhhhhccC-CCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHH
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKG-YDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEA  248 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~-~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  248 (441)
                      ............||+.|+|||++.+.. +.+.++|||||||++|+|++|..||.+.+.......+..+....|..+++.+
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l  240 (305)
T 2wtk_C          161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPL  240 (305)
T ss_dssp             TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCHHH
T ss_pred             ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCHHH
Confidence            433344445667999999999997643 3357899999999999999999999999999999999999989999999999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          249 RRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      .+||.+||..||.+|||+.++++||||+....
T Consensus       241 ~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          241 SDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             HHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            99999999999999999999999999986543


No 93 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.7e-50  Score=389.83  Aligned_cols=263  Identities=24%  Similarity=0.380  Sum_probs=224.1

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      -.+.++.++|++++.||+|+||+||+|++..+++.||+|++...........+.+.+|+.+++.++||||+++++++.+.
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~   83 (294)
T 4eqm_A            4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED   83 (294)
T ss_dssp             CCSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS
T ss_pred             chhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC
Confidence            34677899999999999999999999999999999999999776555556678899999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      +..|+||||++|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        84 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           84 DCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred             CeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence            999999999999999999976 7799999999999999999999999999999999999999999999999999976443


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCC-----CCCCCC
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFK-----CPPWFS  245 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~-----~~~~~~  245 (441)
                      .. .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+......+......+     .++.++
T Consensus       164 ~~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (294)
T 4eqm_A          164 TS-LTQTNHVLGTVQYFSPEQAKGEAT-DECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP  241 (294)
T ss_dssp             ------------CCSSCCHHHHHTCCC-CTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSC
T ss_pred             cc-ccccCccccCccccCHhHhcCCCC-CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCC
Confidence            21 122345679999999999988776 48899999999999999999999998877766666555432     245689


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcCcccC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMESSWFK  276 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~  276 (441)
                      +.+.++|.+||+.||.+||+..+.+.+.|..
T Consensus       242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          242 QSLSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            9999999999999999999666666666643


No 94 
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=2.1e-51  Score=400.47  Aligned_cols=265  Identities=28%  Similarity=0.453  Sum_probs=224.2

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      ..+..+.++|++++.||+|+||+||+|++..+++.||+|++.............+.+|+.+++.++||||+++++++...
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   84 (311)
T 3ork_A            5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE   84 (311)
T ss_dssp             CCCSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEE
T ss_pred             CCcceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeecc
Confidence            45677899999999999999999999999999999999999876555555667899999999999999999999998654


Q ss_pred             C----EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccc
Q 013522           92 S----KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSA  166 (441)
Q Consensus        92 ~----~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~  166 (441)
                      .    ..|+||||+.|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        85 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           85 TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             ETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             CCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            3    45999999999999999975 789999999999999999999999999999999999999999999999999997


Q ss_pred             cccccccC-CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----
Q 013522          167 FSEHLKQD-GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----  241 (441)
Q Consensus       167 ~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----  241 (441)
                      ........ ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+.......+    
T Consensus       165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  243 (311)
T 3ork_A          165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSV-DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH  243 (311)
T ss_dssp             -----------------CCTTCCHHHHHTCCC-CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHS
T ss_pred             cccccccccccccccCcCcccCCHHHhcCCCC-CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccccc
Confidence            54432211 22334679999999999988776 4899999999999999999999999888777766666554332    


Q ss_pred             CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          242 PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       242 ~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      +.+++++.+||.+||+.||.+||++.+++.|+|++.
T Consensus       244 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            458999999999999999999999999999999864


No 95 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.4e-50  Score=405.35  Aligned_cols=255  Identities=32%  Similarity=0.539  Sum_probs=221.0

Q ss_pred             ccCCeEE--eeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           17 LHGKYEL--GRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        17 ~~~~y~i--~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      +...|++  .+.||+|+||+||+|++..+|+.||+|++.....   ...+.+.+|+.+|+.++||||+++++++.+.+.+
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  161 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDI  161 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence            4456766  6789999999999999999999999999976532   3456889999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe--CCCCCeEEeecCccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL--DEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl--~~~~~vkl~DFGla~~~~~  170 (441)
                      |+||||++|++|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||+  +.++.+||+|||++.....
T Consensus       162 ~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~  241 (373)
T 2x4f_A          162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP  241 (373)
T ss_dssp             EEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence            999999999999998864  469999999999999999999999999999999999999  5677899999999976432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCCCH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWFSS  246 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~  246 (441)
                         .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+....+..+    +.+++
T Consensus       242 ---~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  317 (373)
T 2x4f_A          242 ---REKLKVNFGTPEFLAPEVVNYDFV-SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISE  317 (373)
T ss_dssp             ---TCBCCCCCSSCTTCCHHHHTTCBC-CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCH
T ss_pred             ---ccccccccCCCcEeChhhccCCCC-CcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCH
Confidence               233455679999999999977655 5899999999999999999999999998888888888776554    45899


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          247 EARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      ++++||.+||++||.+|||+.++++||||+..
T Consensus       318 ~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          318 EAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence            99999999999999999999999999999754


No 96 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=1.4e-50  Score=409.02  Aligned_cols=252  Identities=33%  Similarity=0.610  Sum_probs=209.9

Q ss_pred             cccCCeEEe-eeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHH-HhCCCCCcceEEEEEEe---
Q 013522           16 LLHGKYELG-RMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVM-KMVKHKHIVELHEVMAS---   90 (441)
Q Consensus        16 ~~~~~y~i~-~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il-~~l~hpnIv~l~~~~~~---   90 (441)
                      .+.++|.+. +.||+|+||+||+|.+..+|+.||||++...        ..+.+|+.++ +..+||||+++++++..   
T Consensus        58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~  129 (400)
T 1nxk_A           58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYA  129 (400)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeeccc
Confidence            456778887 7999999999999999999999999998643        3567888887 45689999999999876   


Q ss_pred             -CCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC---CCCeEEeecC
Q 013522           91 -KSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE---DGNLKVTDFG  163 (441)
Q Consensus        91 -~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~---~~~vkl~DFG  163 (441)
                       ...+|+||||+.||+|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||
T Consensus       130 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG  209 (400)
T 1nxk_A          130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG  209 (400)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred             CCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc
Confidence             6689999999999999999976   25999999999999999999999999999999999999998   7889999999


Q ss_pred             ccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH----HHHHHHHcCCCC
Q 013522          164 LSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV----SMYRKIYRGDFK  239 (441)
Q Consensus       164 la~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~----~~~~~i~~~~~~  239 (441)
                      ++....   ......+.+||+.|+|||++.+..|+ .++|||||||++|+|++|..||.+.+..    .....+..+.+.
T Consensus       210 ~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~  285 (400)
T 1nxk_A          210 FAKETT---SHNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE  285 (400)
T ss_dssp             TCEECC--------------CTTCCGGGSCCCCSS-SHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC
T ss_pred             cccccC---CCCccccCCCCCCccCHhhcCCCCCC-CcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc
Confidence            997543   22345678899999999999877774 8999999999999999999999775432    245566666665


Q ss_pred             CC----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          240 CP----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       240 ~~----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      +|    ..+++++.+||.+||..||++|||+.++++||||....
T Consensus       286 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          286 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            54    35899999999999999999999999999999997643


No 97 
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=2.9e-50  Score=386.11  Aligned_cols=259  Identities=34%  Similarity=0.629  Sum_probs=227.1

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccch---hhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKV---GMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      ++.++|++++.||+|+||+||+|++..+|+.||+|++........   ...+.+.+|+.+++.++||||+++++++.+.+
T Consensus         2 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   81 (283)
T 3bhy_A            2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT   81 (283)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             chhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC
Confidence            466889999999999999999999999999999999976543221   13578999999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC----CeEEeecCcccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG----NLKVTDFGLSAF  167 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~----~vkl~DFGla~~  167 (441)
                      ..|+||||+.+++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++.++    .+||+|||++..
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           82 DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence            99999999999999999975 7799999999999999999999999999999999999998877    799999999875


Q ss_pred             ccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CC
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PW  243 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~  243 (441)
                      ...   ........||+.|+|||++.+..+ +.++||||||+++|+|++|..||.+.+.......+.......+    +.
T Consensus       162 ~~~---~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T 3bhy_A          162 IEA---GNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN  237 (283)
T ss_dssp             CC-----------CCCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred             ccC---CCcccccCCCcCccCcceecCCCC-CcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhccc
Confidence            432   223345679999999999987766 5899999999999999999999999988888888877766554    46


Q ss_pred             CCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          244 FSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       244 ~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      +++.+.+||.+||..||++|||+.++++||||+..
T Consensus       238 ~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          238 TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence            78999999999999999999999999999999753


No 98 
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=4.1e-50  Score=384.77  Aligned_cols=257  Identities=19%  Similarity=0.287  Sum_probs=218.7

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASK   91 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~   91 (441)
                      ....+.++|++.+.||+|+||+||+|++..+++.||+|++....... .....+.+|+.++..+ +||||+++++++.+.
T Consensus         5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~   83 (289)
T 1x8b_A            5 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAED   83 (289)
T ss_dssp             CCCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET
T ss_pred             ccccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC
Confidence            45567789999999999999999999999999999999997654332 3456788999999999 999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC------------
Q 013522           92 SKIYFAMDLVKGGELFNKIAK-----GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED------------  154 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~-----~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~------------  154 (441)
                      +..|+||||++|++|.+++..     +.+++..++.++.||+.||.|||++||+||||||+|||++.+            
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            999999999999999999974     569999999999999999999999999999999999999844            


Q ss_pred             -------CCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH
Q 013522          155 -------GNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV  227 (441)
Q Consensus       155 -------~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~  227 (441)
                             ..+||+|||++.....      .....||+.|+|||++.+....+.++|||||||++|+|++|.+|+..... 
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-  236 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISS------PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ-  236 (289)
T ss_dssp             ------CCCEEECCCTTCEETTC------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-
T ss_pred             ccccCCceEEEEcccccccccCC------ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-
Confidence                   4799999999875432      22346999999999998765556799999999999999999988765543 


Q ss_pred             HHHHHHHcCC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          228 SMYRKIYRGD-FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       228 ~~~~~i~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                        ...+..+. ...|+.+++++.+||.+||+.||++|||+.++++||||....
T Consensus       237 --~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          237 --WHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             --HHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             --HHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence              33444444 356778999999999999999999999999999999998643


No 99 
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=1.7e-50  Score=392.35  Aligned_cols=256  Identities=39%  Similarity=0.733  Sum_probs=226.5

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      ..+.++|++.+.||+|+||+||+|++..+|+.||+|++......   ..+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (304)
T 2jam_A            5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKIKHENIVTLEDIYESTTHY   81 (304)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHhCCCCCeeehhhhcccCCEE
Confidence            45778999999999999999999999999999999999765322   235688999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe---CCCCCeEEeecCccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL---DEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl---~~~~~vkl~DFGla~~~~~  170 (441)
                      |+||||+.|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.... 
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~-  160 (304)
T 2jam_A           82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ-  160 (304)
T ss_dssp             EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC-
T ss_pred             EEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC-
Confidence            999999999999999875 789999999999999999999999999999999999999   778899999999987432 


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCCCH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWFSS  246 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~  246 (441)
                         .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+..+...++    +.+++
T Consensus       161 ---~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  236 (304)
T 2jam_A          161 ---NGIMSTACGTPGYVAPEVLAQKPY-SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISE  236 (304)
T ss_dssp             ---CBTTHHHHSCCCBCCTTTBSSCSC-CHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCH
T ss_pred             ---CCccccccCCCCccChHHhccCCC-CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCH
Confidence               223455679999999999987766 4899999999999999999999999988888888888765443    45789


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          247 EARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      ++.+||.+||..||++|||+.++++||||+..
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          237 SAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            99999999999999999999999999999754


No 100
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=4.8e-50  Score=400.15  Aligned_cols=258  Identities=33%  Similarity=0.606  Sum_probs=227.4

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeeccccc-----chhhHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVI-----KVGMMEQIKREISVMKMV-KHKHIVELHEVMAS   90 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~   90 (441)
                      +.++|++.+.||+|+||.||+|++..+|+.||||++......     .....+.+.+|+.+++.+ +||||+++++++..
T Consensus        92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  171 (365)
T 2y7j_A           92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES  171 (365)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred             hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence            457899999999999999999999999999999999765321     112356788999999999 89999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      .+..|+||||+.|++|.+++.. +.+++..+..++.||+.||.|||+.||+||||||+|||++.+|.+||+|||++....
T Consensus       172 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~  251 (365)
T 2y7j_A          172 SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE  251 (365)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence            9999999999999999999976 679999999999999999999999999999999999999999999999999987543


Q ss_pred             ccccCCcccccccCCCccchhhhhcc-----CCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC---
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKK-----GYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP---  241 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~-----~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~---  241 (441)
                      .   .......+||+.|+|||++.+.     ...+.++|||||||++|+|++|..||...+.......+..+....+   
T Consensus       252 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  328 (365)
T 2y7j_A          252 P---GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPE  328 (365)
T ss_dssp             T---TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHH
T ss_pred             C---CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcc
Confidence            2   2344567899999999998643     2235789999999999999999999999888888888888776554   


Q ss_pred             -CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          242 -PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       242 -~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                       ..+++.+.+||.+||+.||++|||+.++++||||++
T Consensus       329 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          329 WDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence             357899999999999999999999999999999973


No 101
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=7.4e-51  Score=399.19  Aligned_cols=256  Identities=27%  Similarity=0.459  Sum_probs=211.2

Q ss_pred             CCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEEE
Q 013522           19 GKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAM   98 (441)
Q Consensus        19 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv~   98 (441)
                      ++|++++.||+|+||+||+|++..+++.||+|++......  .....+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   79 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence            6899999999999999999999999999999999654321  11123457999999999999999999999999999999


Q ss_pred             eccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCc
Q 013522           99 DLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGL  176 (441)
Q Consensus        99 E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~  176 (441)
                      ||+.| +|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....  ....
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~--~~~~  156 (324)
T 3mtl_A           80 EYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI--PTKT  156 (324)
T ss_dssp             ECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred             ccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccC--Cccc
Confidence            99975 89888875  4599999999999999999999999999999999999999999999999999875432  2233


Q ss_pred             ccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--CCC---------------
Q 013522          177 LHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--DFK---------------  239 (441)
Q Consensus       177 ~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~~~---------------  239 (441)
                      ....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+.+.  .+.               
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT  236 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcc
Confidence            445678999999999987555569999999999999999999999998877766665431  100               


Q ss_pred             -------------CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          240 -------------CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       240 -------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                   .++.+++++.+||.+||++||.+|||+.++++||||....
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence                         1124688999999999999999999999999999998654


No 102
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.6e-50  Score=397.62  Aligned_cols=261  Identities=26%  Similarity=0.416  Sum_probs=218.9

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      -...++|++++.||+|+||+||+|++..+|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   99 (331)
T 4aaa_A           21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD-DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRW   99 (331)
T ss_dssp             CBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             hhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC-chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEE
Confidence            3456899999999999999999999999999999999976543 234456788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ  173 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~  173 (441)
                      |+||||+.+++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  
T Consensus       100 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  177 (331)
T 4aaa_A          100 YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--  177 (331)
T ss_dssp             EEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             EEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC--
Confidence            999999999999888764 67999999999999999999999999999999999999999999999999999754332  


Q ss_pred             CCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC-----------------
Q 013522          174 DGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG-----------------  236 (441)
Q Consensus       174 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~-----------------  236 (441)
                      .......+||+.|+|||++.+....+.++|||||||++|+|++|..||...+.......+...                 
T Consensus       178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (331)
T 4aaa_A          178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV  257 (331)
T ss_dssp             ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred             ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence            233455679999999999987655568999999999999999999999988766555444321                 


Q ss_pred             --CCCC------------CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          237 --DFKC------------PPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       237 --~~~~------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                        ....            .+.+++.+.+||.+||+.||.+|||+.++|+||||+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence              0111            12468999999999999999999999999999999754


No 103
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=9.3e-50  Score=385.45  Aligned_cols=265  Identities=31%  Similarity=0.529  Sum_probs=228.9

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeeccccc------chhhHHHHHHHHHHHHhCC-CCCcceE
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVI------KVGMMEQIKREISVMKMVK-HKHIVEL   84 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~------~~~~~~~~~~Ei~il~~l~-hpnIv~l   84 (441)
                      .....+.++|++.+.||+|+||+||+|++..+|+.||+|++......      .....+.+.+|+.+++++. ||||+++
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~   89 (298)
T 1phk_A           10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL   89 (298)
T ss_dssp             -----CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             cCCcchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            33456789999999999999999999999999999999999765321      1123567889999999995 9999999


Q ss_pred             EEEEEeCCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecC
Q 013522           85 HEVMASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG  163 (441)
Q Consensus        85 ~~~~~~~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFG  163 (441)
                      ++++.+....|+||||+.|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg  169 (298)
T 1phk_A           90 KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG  169 (298)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             eeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEeccc
Confidence            9999999999999999999999999976 679999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccCCcccccccCCCccchhhhhc-----cCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC
Q 013522          164 LSAFSEHLKQDGLLHTTCGTPAYVAPEVISK-----KGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF  238 (441)
Q Consensus       164 la~~~~~~~~~~~~~~~~gt~~y~APE~l~~-----~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~  238 (441)
                      ++.....   .......+||+.|+|||++.+     ....+.++|||||||++|+|++|..||...+.......+..+..
T Consensus       170 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  246 (298)
T 1phk_A          170 FSCQLDP---GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY  246 (298)
T ss_dssp             TCEECCT---TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             chhhcCC---CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc
Confidence            9875432   233456679999999999862     22335899999999999999999999999988888888887766


Q ss_pred             CCC----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          239 KCP----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       239 ~~~----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ..+    +.+++.+.+||.+||..||.+|||+.++++||||++..
T Consensus       247 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          247 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            544    24789999999999999999999999999999998643


No 104
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=4.9e-50  Score=393.84  Aligned_cols=263  Identities=29%  Similarity=0.466  Sum_probs=227.6

Q ss_pred             CccccCCeEEe-eeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 013522           14 PTLLHGKYELG-RMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASK   91 (441)
Q Consensus        14 ~~~~~~~y~i~-~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~   91 (441)
                      ...+.++|.+. +.||+|+||+||+|++..+++.||+|++...... ......+.+|+.+++.+ +||||+++++++.+.
T Consensus        23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~  101 (327)
T 3lm5_A           23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVINLHEVYENT  101 (327)
T ss_dssp             HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence            45688899998 8999999999999999999999999999765432 23456788999999999 569999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC---CCCeEEeecCcc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE---DGNLKVTDFGLS  165 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~---~~~vkl~DFGla  165 (441)
                      ...|+||||+.||+|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|||++
T Consensus       102 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a  181 (327)
T 3lm5_A          102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS  181 (327)
T ss_dssp             SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred             CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence            999999999999999999864   67999999999999999999999999999999999999988   789999999999


Q ss_pred             ccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----
Q 013522          166 AFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----  241 (441)
Q Consensus       166 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----  241 (441)
                      .....   .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+....+..+.......+    
T Consensus       182 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  257 (327)
T 3lm5_A          182 RKIGH---ACELREIMGTPEYLAPEILNYDPI-TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF  257 (327)
T ss_dssp             EEC------------CCCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTT
T ss_pred             cccCC---ccccccccCCcCccCCeeecCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhh
Confidence            75432   223445689999999999987776 4899999999999999999999999988888887776654443    


Q ss_pred             CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCCc
Q 013522          242 PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAPK  281 (441)
Q Consensus       242 ~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~~  281 (441)
                      ..+++.+.+||.+||++||.+|||+.++++||||+.....
T Consensus       258 ~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~  297 (327)
T 3lm5_A          258 SSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFE  297 (327)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTT
T ss_pred             cccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccccc
Confidence            3578999999999999999999999999999999875433


No 105
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=3.9e-50  Score=391.79  Aligned_cols=254  Identities=23%  Similarity=0.389  Sum_probs=208.7

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHH-hCCCCCcceEEEEEEeCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMK-MVKHKHIVELHEVMASKS   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~-~l~hpnIv~l~~~~~~~~   92 (441)
                      ...+.++|++.+.||+|+||+||+|++..+|+.||||++....... ........|+..+. ..+||||+++++++.+.+
T Consensus        52 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGP-KDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             SCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             cchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccCh-HHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence            4566789999999999999999999999999999999986544332 22334445555554 459999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      ..|+||||+ +++|.+.+..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          131 ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             EEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             EEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            999999999 6689888865  5699999999999999999999999999999999999999999999999999875432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC--CCCCCCCHHH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF--KCPPWFSSEA  248 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~  248 (441)
                         .......+||+.|+|||++.+ .+ +.++|||||||++|+|++|..|+.+...   ...+..+..  ..+..+++++
T Consensus       210 ---~~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l  281 (311)
T 3p1a_A          210 ---AGAGEVQEGDPRYMAPELLQG-SY-GTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYLPPEFTAGLSSEL  281 (311)
T ss_dssp             --------CCCCCGGGCCGGGGGT-CC-STHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCCCHHHHTTSCHHH
T ss_pred             ---CCCCcccCCCccccCHhHhcC-CC-CchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCCCcccccCCCHHH
Confidence               233455679999999999875 45 5899999999999999999766655332   233333332  2345689999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          249 RRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      .+||.+||++||++|||+.++++||||++
T Consensus       282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          282 RSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            99999999999999999999999999975


No 106
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=9.2e-50  Score=395.65  Aligned_cols=257  Identities=23%  Similarity=0.388  Sum_probs=223.7

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      .++|++.+.||+|+||+||+|++..+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            35699999999999999999999999999999999866544445567889999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522           98 MDLVKGGELFNKIA--KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus        98 ~E~~~gg~L~~~i~--~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      |||+. |+|.+.+.  .+.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....     
T Consensus       133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-----  206 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----  206 (348)
T ss_dssp             EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred             EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----
Confidence            99997 57888775  36799999999999999999999999999999999999999999999999999875432     


Q ss_pred             cccccccCCCccchhhhhc--cCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCC--CCCCCCHHHHHH
Q 013522          176 LLHTTCGTPAYVAPEVISK--KGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFK--CPPWFSSEARRL  251 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~--~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~l  251 (441)
                       ....+||+.|+|||++..  ....+.++|||||||++|+|++|..||.+.+.......+..+..+  .+..+++.+.+|
T Consensus       207 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  285 (348)
T 1u5q_A          207 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF  285 (348)
T ss_dssp             -BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHH
T ss_pred             -CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence             235679999999999853  233358999999999999999999999988877766666655433  245689999999


Q ss_pred             HHHhcCCCCCCCCCHHHHhcCcccCccCCc
Q 013522          252 ITKLLDPNPNSRIAISKIMESSWFKKSAPK  281 (441)
Q Consensus       252 i~~~L~~dP~~R~t~~eil~hpwf~~~~~~  281 (441)
                      |.+||+.||++|||+.++++||||....++
T Consensus       286 i~~~l~~dP~~Rps~~~ll~h~~~~~~~~~  315 (348)
T 1u5q_A          286 VDSCLQKIPQDRPTSEVLLKHRFVLRERPP  315 (348)
T ss_dssp             HHHHTCSSGGGSCCHHHHTTCHHHHSCCCT
T ss_pred             HHHHcccChhhCcCHHHHhhChhhhccCCc
Confidence            999999999999999999999999765543


No 107
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.4e-49  Score=385.64  Aligned_cols=275  Identities=24%  Similarity=0.415  Sum_probs=231.8

Q ss_pred             CCCCCCCCCCCCC---CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC
Q 013522            1 MATSNSNGGGDDR---PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK   77 (441)
Q Consensus         1 m~~~~~~~~~~~~---~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~   77 (441)
                      |+.+....+....   ......+|++++.||+|+||+||+|++..+++.||+|++......  ...+.+.+|+.+++.++
T Consensus         1 ~~~~~~~~~~p~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~   78 (303)
T 3a7i_A            1 MAHSPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCD   78 (303)
T ss_dssp             ------------CTTCEECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--TTHHHHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCCchhcCCCChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--HHHHHHHHHHHHHHhCC
Confidence            5555544432222   234567899999999999999999999999999999999765432  34678999999999999


Q ss_pred             CCCcceEEEEEEeCCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCe
Q 013522           78 HKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNL  157 (441)
Q Consensus        78 hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~v  157 (441)
                      ||||+++++++.+....|+||||+.|++|.+++..+.+++..+..++.||+.||.|||++||+||||||+||+++.++.+
T Consensus        79 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~  158 (303)
T 3a7i_A           79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEV  158 (303)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred             CCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCE
Confidence            99999999999999999999999999999999998899999999999999999999999999999999999999999999


Q ss_pred             EEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCC
Q 013522          158 KVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGD  237 (441)
Q Consensus       158 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~  237 (441)
                      ||+|||++......  ........||+.|+|||++.+..+. .++|||||||++|+|++|..||...+.......+..+.
T Consensus       159 kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  235 (303)
T 3a7i_A          159 KLADFGVAGQLTDT--QIKRNTFVGTPFWMAPEVIKQSAYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN  235 (303)
T ss_dssp             EECCCTTCEECBTT--BCCBCCCCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred             EEeecccceecCcc--ccccCccCCCcCccCHHHHhcCCCC-chhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCC
Confidence            99999998754332  1223456799999999999877664 89999999999999999999999888777766665554


Q ss_pred             -CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          238 -FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       238 -~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                       ...+..+++.+.+||.+||..||.+|||+.++++||||.....
T Consensus       236 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  279 (303)
T 3a7i_A          236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK  279 (303)
T ss_dssp             CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred             CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence             3456678999999999999999999999999999999976543


No 108
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=5.9e-50  Score=395.84  Aligned_cols=260  Identities=25%  Similarity=0.428  Sum_probs=214.4

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKH--KHIVELHEVMASKSK   93 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h--pnIv~l~~~~~~~~~   93 (441)
                      +..++|++++.||+|+||+||+|.+ .+++.||+|++..... .....+.+.+|+.+|+.++|  |||+++++++.+...
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~   83 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY   83 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE
Confidence            4567899999999999999999998 5789999999976543 23456788999999999976  999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      +|+|||+ .+++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.......
T Consensus        84 ~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~  161 (343)
T 3dbq_A           84 IYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  161 (343)
T ss_dssp             EEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred             EEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence            9999994 57899999976 6799999999999999999999999999999999999996 6789999999998655433


Q ss_pred             cCCcccccccCCCccchhhhhc----------cCCCCCcccHHHHHHHHHHHhhCCCCCCCCc-HHHHHHHHHcC--CCC
Q 013522          173 QDGLLHTTCGTPAYVAPEVISK----------KGYDGAKADIWSCGVILYVLLAGFLPFQDDN-IVSMYRKIYRG--DFK  239 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~----------~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~-~~~~~~~i~~~--~~~  239 (441)
                      ........+||+.|+|||++.+          ....+.++|||||||++|+|++|..||.... .......+...  ...
T Consensus       162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  241 (343)
T 3dbq_A          162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE  241 (343)
T ss_dssp             --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC
T ss_pred             ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccC
Confidence            3334456789999999999965          1334589999999999999999999998743 33344444433  345


Q ss_pred             CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          240 CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       240 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      +|...++++.+||.+||+.||.+|||+.++++||||+...
T Consensus       242 ~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          242 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence            6777889999999999999999999999999999998543


No 109
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=1.9e-50  Score=395.41  Aligned_cols=257  Identities=26%  Similarity=0.419  Sum_probs=211.2

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC---
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS---   92 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~---   92 (441)
                      .+.++|++++.||+|+||+||+|++..+|+.||||++....  .....+.+.+|+.+|+.++||||+++++++.+..   
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   80 (332)
T 3qd2_B            3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK   80 (332)
T ss_dssp             HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred             hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence            45678999999999999999999999999999999997654  2345678999999999999999999999985543   


Q ss_pred             ------------------------------------------------------EEEEEEeccCCCchHHHHhcC----C
Q 013522           93 ------------------------------------------------------KIYFAMDLVKGGELFNKIAKG----R  114 (441)
Q Consensus        93 ------------------------------------------------------~~~lv~E~~~gg~L~~~i~~~----~  114 (441)
                                                                            ..|+|||||.|++|.+++...    .
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  160 (332)
T 3qd2_B           81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED  160 (332)
T ss_dssp             HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred             hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence                                                                  389999999999999999863    3


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc----------CCcccccccCC
Q 013522          115 LREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ----------DGLLHTTCGTP  184 (441)
Q Consensus       115 l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~----------~~~~~~~~gt~  184 (441)
                      .++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........          .......+||+
T Consensus       161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  240 (332)
T 3qd2_B          161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK  240 (332)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence            56667899999999999999999999999999999999999999999999976543221          12234567999


Q ss_pred             CccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCC-CCCCCHHHHHHHHHhcCCCCCCC
Q 013522          185 AYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKC-PPWFSSEARRLITKLLDPNPNSR  263 (441)
Q Consensus       185 ~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R  263 (441)
                      .|+|||++.+..+ +.++|||||||++|+|++|..|+..  .......+.....+. +...++++.+||.+||++||++|
T Consensus       241 ~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  317 (332)
T 3qd2_B          241 LYMSPEQIHGNNY-SHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTER  317 (332)
T ss_dssp             GGSCHHHHHCCCC-CTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred             CccChHHhcCCCC-cchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcC
Confidence            9999999988777 5899999999999999998776532  223333344433221 22357888999999999999999


Q ss_pred             CCHHHHhcCcccCc
Q 013522          264 IAISKIMESSWFKK  277 (441)
Q Consensus       264 ~t~~eil~hpwf~~  277 (441)
                      ||+.++++||||++
T Consensus       318 ps~~~~l~~~~f~~  331 (332)
T 3qd2_B          318 PEATDIIENAIFEN  331 (332)
T ss_dssp             CCHHHHHHSTTCCC
T ss_pred             CCHHHHhhchhhhc
Confidence            99999999999975


No 110
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.6e-50  Score=398.90  Aligned_cols=260  Identities=28%  Similarity=0.411  Sum_probs=215.5

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccc--hhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIK--VGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      ..++|++++.||+|+||+||+|++..+|+.||+|++.......  ......+.+|+.+++.++||||+++++++.+.+..
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            4688999999999999999999999999999999997543221  11234678999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      |+||||+.+ +|.+.+..  ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....  
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~--  164 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS--  164 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS--
T ss_pred             EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccC--
Confidence            999999986 88888875  4689999999999999999999999999999999999999999999999999976432  


Q ss_pred             cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--CCC---C-------
Q 013522          173 QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--DFK---C-------  240 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~~~---~-------  240 (441)
                      ........+||+.|+|||++.+....+.++|||||||++|+|++|.+||.+.+....+..+...  ...   +       
T Consensus       165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  244 (346)
T 1ua2_A          165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP  244 (346)
T ss_dssp             CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence            2234456789999999999976655568999999999999999999999998887777666542  110   0       


Q ss_pred             ----------------CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          241 ----------------PPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       241 ----------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                      .+.+++++.+||.+||..||++|||+.++++||||++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence                            134578999999999999999999999999999998654


No 111
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=5.9e-50  Score=403.07  Aligned_cols=259  Identities=24%  Similarity=0.415  Sum_probs=216.3

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC--CCCcceEEEEEEeCCEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK--HKHIVELHEVMASKSKI   94 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--hpnIv~l~~~~~~~~~~   94 (441)
                      ...+|++++.||+|+||+||+|.+.. ++.||||++..... .....+.+.+|+.+|+.++  ||||+++++++...+.+
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~  131 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  131 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEE
Confidence            34569999999999999999999854 89999999976543 3345678999999999996  59999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ  173 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~  173 (441)
                      |+||| +.+++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++........
T Consensus       132 ~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~  209 (390)
T 2zmd_A          132 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT  209 (390)
T ss_dssp             EEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred             EEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence            99999 568899999976 6789999999999999999999999999999999999995 58999999999986544333


Q ss_pred             CCcccccccCCCccchhhhhcc----------CCCCCcccHHHHHHHHHHHhhCCCCCCCCc-HHHHHHHHHcC--CCCC
Q 013522          174 DGLLHTTCGTPAYVAPEVISKK----------GYDGAKADIWSCGVILYVLLAGFLPFQDDN-IVSMYRKIYRG--DFKC  240 (441)
Q Consensus       174 ~~~~~~~~gt~~y~APE~l~~~----------~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~-~~~~~~~i~~~--~~~~  240 (441)
                      .......+||+.|+|||++.+.          ...+.++|||||||++|+|++|..||.... .......+...  ...+
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~  289 (390)
T 2zmd_A          210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF  289 (390)
T ss_dssp             ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCC
T ss_pred             cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCC
Confidence            3334567899999999999752          234589999999999999999999998753 33445555554  3456


Q ss_pred             CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          241 PPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       241 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      |.+.++++.+||.+||+.||.+|||+.++++||||+...
T Consensus       290 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             CccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            788899999999999999999999999999999997543


No 112
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2.5e-50  Score=402.56  Aligned_cols=257  Identities=26%  Similarity=0.415  Sum_probs=203.7

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC----
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK----   91 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----   91 (441)
                      .+.++|++++.||+|+||+||+|.+..+|+.||+|++.... ........+.+|+.+|+.++||||+++++++...    
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  104 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE  104 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence            35689999999999999999999999999999999996543 2334567888999999999999999999999654    


Q ss_pred             --CEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           92 --SKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        92 --~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                        ...|+|+||+ +++|.+++..+++++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       105 ~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          105 EFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             GCCCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             cCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence              5689999999 7899999988889999999999999999999999999999999999999999999999999997543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--C----------
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--D----------  237 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~----------  237 (441)
                      .     .....+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+.+.  .          
T Consensus       184 ~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~  258 (367)
T 2fst_X          184 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  258 (367)
T ss_dssp             ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred             c-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence            2     2345689999999999987555568999999999999999999999998876666555331  0          


Q ss_pred             -----------CCC--------CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          238 -----------FKC--------PPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       238 -----------~~~--------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                 ...        .+..++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence                       001        124688999999999999999999999999999998643


No 113
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=1.5e-49  Score=384.21  Aligned_cols=259  Identities=29%  Similarity=0.512  Sum_probs=218.3

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      .++|++.+.||+|+||+||+|++..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   80 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence            36899999999999999999999999999999999754322 22346788999999999999999999999999999999


Q ss_pred             EeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccC
Q 013522           98 MDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQD  174 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~  174 (441)
                      |||+. ++|.+++..   +.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......  .
T Consensus        81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~  157 (299)
T 2r3i_A           81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--V  157 (299)
T ss_dssp             EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC--S
T ss_pred             EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC--c
Confidence            99997 599998875   46899999999999999999999999999999999999999999999999998754321  2


Q ss_pred             CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--C---------------
Q 013522          175 GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--D---------------  237 (441)
Q Consensus       175 ~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~---------------  237 (441)
                      .......||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+.+.  .               
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (299)
T 2r3i_A          158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY  237 (299)
T ss_dssp             BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCccc
Confidence            22345678999999999987765678999999999999999999999998877666555432  0               


Q ss_pred             -CCCC-----------CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          238 -FKCP-----------PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       238 -~~~~-----------~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                       ..++           +.+++++++||.+||+.||++|||+.++++||||+....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~  292 (299)
T 2r3i_A          238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  292 (299)
T ss_dssp             CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCCC
Confidence             0111           236889999999999999999999999999999986543


No 114
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=4.5e-50  Score=407.68  Aligned_cols=261  Identities=34%  Similarity=0.645  Sum_probs=212.6

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccc-----hhhHHHHHHHHHHHHhCCCCCcceEEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIK-----VGMMEQIKREISVMKMVKHKHIVELHEVM   88 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~   88 (441)
                      +..+.++|++.+.||+|+||+||+|.+..+++.||+|++.+.....     ......+.+|+.+|+.++||||+++++++
T Consensus       130 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~  209 (419)
T 3i6u_A          130 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF  209 (419)
T ss_dssp             CHHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             chhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3456789999999999999999999999999999999998754321     11223578999999999999999999998


Q ss_pred             EeCCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC---CeEEeecCc
Q 013522           89 ASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG---NLKVTDFGL  164 (441)
Q Consensus        89 ~~~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~---~vkl~DFGl  164 (441)
                      . .+..|+||||+.||+|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||+
T Consensus       210 ~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~  288 (419)
T 3i6u_A          210 D-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  288 (419)
T ss_dssp             E-SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred             e-cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence            5 4568999999999999999875 7799999999999999999999999999999999999997654   499999999


Q ss_pred             cccccccccCCcccccccCCCccchhhhhc--cCCCCCcccHHHHHHHHHHHhhCCCCCCCCcH-HHHHHHHHcCCCCCC
Q 013522          165 SAFSEHLKQDGLLHTTCGTPAYVAPEVISK--KGYDGAKADIWSCGVILYVLLAGFLPFQDDNI-VSMYRKIYRGDFKCP  241 (441)
Q Consensus       165 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~--~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~-~~~~~~i~~~~~~~~  241 (441)
                      |.....   .....+.+||+.|+|||++.+  ....+.++|||||||++|+|++|.+||..... ..+...+..+....+
T Consensus       289 a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~  365 (419)
T 3i6u_A          289 SKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI  365 (419)
T ss_dssp             TTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCC
T ss_pred             ceecCC---CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCC
Confidence            986442   334556789999999999853  22335789999999999999999999976533 344556666665543


Q ss_pred             ----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          242 ----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       242 ----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                          +.+++.+.+||.+||++||++|||+.++++||||+..
T Consensus       366 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          366 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             chhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence                3579999999999999999999999999999999753


No 115
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=2.7e-49  Score=381.16  Aligned_cols=254  Identities=22%  Similarity=0.440  Sum_probs=218.7

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe----CC
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS----KS   92 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~----~~   92 (441)
                      -...|++.+.||+|+||+||+|.+..++..||+|++...... ....+.+.+|+.+++.++||||+++++++..    ..
T Consensus        24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (290)
T 1t4h_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCc
Confidence            345689999999999999999999999999999999765543 3456788999999999999999999999865    46


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcC--cEeccCCCCcEEeC-CCCCeEEeecCccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRG--VYHRDLKPENLLLD-EDGNLKVTDFGLSAFS  168 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~g--i~HrDLkp~NILl~-~~~~vkl~DFGla~~~  168 (441)
                      .+|+||||+.+++|.+++.. +.+++..++.++.||+.||.|||++|  |+||||||+|||++ .++.+||+|||++...
T Consensus       103 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~  182 (290)
T 1t4h_A          103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             eEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence            68999999999999999987 78999999999999999999999999  99999999999998 7899999999998643


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC-cHHHHHHHHHcCCC--CCCCCCC
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD-NIVSMYRKIYRGDF--KCPPWFS  245 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~-~~~~~~~~i~~~~~--~~~~~~~  245 (441)
                      .    .......+||+.|+|||++.+ .+ +.++|||||||++|+|++|..||... +....+..+..+..  ..+...+
T Consensus       183 ~----~~~~~~~~~t~~y~aPE~~~~-~~-~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (290)
T 1t4h_A          183 R----ASFAKAVIGTPEFMAPEMYEE-KY-DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI  256 (290)
T ss_dssp             C----TTSBEESCSSCCCCCGGGGGT-CC-CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCC
T ss_pred             c----ccccccccCCcCcCCHHHHhc-cC-CCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCC
Confidence            3    233455679999999998864 34 58999999999999999999999874 44455555554432  2345578


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      +++.+||.+||+.||.+|||+.++++||||++
T Consensus       257 ~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            99999999999999999999999999999985


No 116
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.5e-49  Score=405.10  Aligned_cols=256  Identities=24%  Similarity=0.420  Sum_probs=216.6

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC------CCCCcceEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV------KHKHIVELHEV   87 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l------~hpnIv~l~~~   87 (441)
                      ...+..+|++++.||+|+||+||+|.+..+++.||+|++....    .....+.+|+.+++.+      +||||++++++
T Consensus        92 ~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~  167 (429)
T 3kvw_A           92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLEN  167 (429)
T ss_dssp             TCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred             CCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEee
Confidence            3567789999999999999999999999999999999997543    3346777899888877      57899999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC--eEEeec
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN--LKVTDF  162 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~--vkl~DF  162 (441)
                      +.....+|+||||+. ++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+||
T Consensus       168 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DF  246 (429)
T 3kvw_A          168 FTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF  246 (429)
T ss_dssp             EEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred             cccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeec
Confidence            999999999999996 589999875   34899999999999999999999999999999999999999987  999999


Q ss_pred             CccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC----
Q 013522          163 GLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF----  238 (441)
Q Consensus       163 Gla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~----  238 (441)
                      |+|....     ....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+..+....+.....    
T Consensus       247 G~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~  320 (429)
T 3kvw_A          247 GSSCYEH-----QRVYTYIQSRFYRAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ  320 (429)
T ss_dssp             TTCEETT-----CCCCSSCSCGGGCCHHHHHTBCC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             ccceecC-----CcccccCCCCCccChHHHhCCCC-CchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            9986432     23456789999999999998877 5899999999999999999999999887666554432100    


Q ss_pred             ----------------C---------------------------------------CCCCCCHHHHHHHHHhcCCCCCCC
Q 013522          239 ----------------K---------------------------------------CPPWFSSEARRLITKLLDPNPNSR  263 (441)
Q Consensus       239 ----------------~---------------------------------------~~~~~~~~~~~li~~~L~~dP~~R  263 (441)
                                      .                                       ++...++.+.+||.+||++||++|
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~R  400 (429)
T 3kvw_A          321 KLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVR  400 (429)
T ss_dssp             HHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhC
Confidence                            0                                       011237889999999999999999


Q ss_pred             CCHHHHhcCcccCccCC
Q 013522          264 IAISKIMESSWFKKSAP  280 (441)
Q Consensus       264 ~t~~eil~hpwf~~~~~  280 (441)
                      ||+.|+|+||||+...+
T Consensus       401 pta~e~L~Hpw~~~~~~  417 (429)
T 3kvw_A          401 MTPGQALRHPWLRRRLP  417 (429)
T ss_dssp             CCHHHHHTSTTTC----
T ss_pred             CCHHHHhCChhhccCCC
Confidence            99999999999987543


No 117
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=7.7e-50  Score=399.43  Aligned_cols=257  Identities=26%  Similarity=0.433  Sum_probs=210.4

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC---
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS---   92 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~---   92 (441)
                      .+.++|++++.||+|+||+||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++....   
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT
T ss_pred             chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc
Confidence            356899999999999999999999999999999999976432 3345677889999999999999999999997654   


Q ss_pred             ---EEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           93 ---KIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        93 ---~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                         ..|+||||+.| +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       101 ~~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          101 EFQDVYIVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             TCCEEEEEEECCSE-EHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             cccceEEEEEcCCC-CHHHHHh-hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence               89999999975 7888876 459999999999999999999999999999999999999999999999999997543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCC---------
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKC---------  240 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~---------  240 (441)
                      .   .......+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+....+..+.......         
T Consensus       179 ~---~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  254 (371)
T 2xrw_A          179 T---SFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ  254 (371)
T ss_dssp             --------------CTTCCHHHHTTCCCC-TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred             c---ccccCCceecCCccCHHHhcCCCCC-chHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence            2   2234567899999999999887774 89999999999999999999999988877776665431110         


Q ss_pred             ---------------------------CC------CCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          241 ---------------------------PP------WFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       241 ---------------------------~~------~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                                 |.      ..++++++||.+||+.||++|||+.++++||||+...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY  326 (371)
T ss_dssp             HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhc
Confidence                                       00      0146789999999999999999999999999997543


No 118
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=9e-50  Score=396.66  Aligned_cols=259  Identities=27%  Similarity=0.426  Sum_probs=221.5

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      +.+..++|++.+.||+|+||+||+|++..+++.||+|++....  .....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  105 (360)
T 3eqc_A           28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE  105 (360)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTE
T ss_pred             cccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCE
Confidence            4566789999999999999999999999999999999997653  33456789999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhc-CcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSR-GVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~-gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .|+||||+.|++|.+++.. +.+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++......
T Consensus       106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  185 (360)
T 3eqc_A          106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  185 (360)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             EEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence            9999999999999999976 7899999999999999999999996 9999999999999999999999999998754321


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHH--------------------
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYR--------------------  231 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~--------------------  231 (441)
                          .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+......                    
T Consensus       186 ----~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (360)
T 3eqc_A          186 ----MANSFVGTRSYMSPERLQGTHY-SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP  260 (360)
T ss_dssp             ----C----CCCCTTCCHHHHTTCCC-SHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------
T ss_pred             ----cccCCCCCCCeECHHHHcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence                2345679999999999988766 489999999999999999999998766543322                    


Q ss_pred             ----------------------HHHcCCC-CCC-CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          232 ----------------------KIYRGDF-KCP-PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       232 ----------------------~i~~~~~-~~~-~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                            .+..... ..+ ..+++++.+||.+||++||++|||+.++++||||+...
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence                                  2222221 122 23788999999999999999999999999999998643


No 119
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.3e-49  Score=399.26  Aligned_cols=252  Identities=28%  Similarity=0.436  Sum_probs=212.1

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe-----
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS-----   90 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----   90 (441)
                      ...++|++++.||+|+||+||+|++..+|+.||+|++..+...       ..+|+.+|+.++||||+++++++..     
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   76 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTTGDEE   76 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence            4567999999999999999999999999999999998755322       2379999999999999999999843     


Q ss_pred             ---------------------------------CCEEEEEEeccCCCchHHHHhc-----CCCCHHHHHHHHHHHHHHHH
Q 013522           91 ---------------------------------KSKIYFAMDLVKGGELFNKIAK-----GRLREDVARVYFQQLISAVD  132 (441)
Q Consensus        91 ---------------------------------~~~~~lv~E~~~gg~L~~~i~~-----~~l~~~~~~~~~~qll~aL~  132 (441)
                                                       ...+++||||+.| +|.+.+..     +.+++..++.++.||+.||.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             ---------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                                             3458999999985 77666642     67999999999999999999


Q ss_pred             HHhhcCcEeccCCCCcEEeC-CCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHH
Q 013522          133 FCHSRGVYHRDLKPENLLLD-EDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVIL  211 (441)
Q Consensus       133 ylH~~gi~HrDLkp~NILl~-~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil  211 (441)
                      |||++||+||||||+|||++ .++.+||+|||+|.....   .......+||+.|+|||++.+....+.++||||+||++
T Consensus       156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  232 (383)
T 3eb0_A          156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP---SEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF  232 (383)
T ss_dssp             HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCT---TSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCC---CCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence            99999999999999999998 678999999999975432   23345667999999999998766556999999999999


Q ss_pred             HHHhhCCCCCCCCcHHHHHHHHHcC-----------------CCC------------CCCCCCHHHHHHHHHhcCCCCCC
Q 013522          212 YVLLAGFLPFQDDNIVSMYRKIYRG-----------------DFK------------CPPWFSSEARRLITKLLDPNPNS  262 (441)
Q Consensus       212 ~~ll~G~~Pf~~~~~~~~~~~i~~~-----------------~~~------------~~~~~~~~~~~li~~~L~~dP~~  262 (441)
                      |+|++|.+||.+.+..+....+.+.                 ...            +|..+++++.+||.+||++||.+
T Consensus       233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  312 (383)
T 3eb0_A          233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL  312 (383)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence            9999999999998877666655431                 011            34557899999999999999999


Q ss_pred             CCCHHHHhcCcccCcc
Q 013522          263 RIAISKIMESSWFKKS  278 (441)
Q Consensus       263 R~t~~eil~hpwf~~~  278 (441)
                      |||+.++++||||+..
T Consensus       313 R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          313 RINPYEAMAHPFFDHL  328 (383)
T ss_dssp             SCCHHHHHTSGGGHHH
T ss_pred             CCCHHHHhcCHHHHHH
Confidence            9999999999999753


No 120
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.8e-49  Score=386.57  Aligned_cols=263  Identities=25%  Similarity=0.396  Sum_probs=216.8

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE---
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA---   89 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~---   89 (441)
                      .+..+.++|++++.||+|+||+||+|.+..+++.||+|++....   ....+.+.+|+.+++.++||||+++++++.   
T Consensus         5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   81 (320)
T 2i6l_A            5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVFEILGPSG   81 (320)
T ss_dssp             -CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTS
T ss_pred             ccCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC---hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccc
Confidence            34568899999999999999999999999999999999987542   345678899999999999999999999873   


Q ss_pred             -----------eCCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC-CCCCe
Q 013522           90 -----------SKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD-EDGNL  157 (441)
Q Consensus        90 -----------~~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~-~~~~v  157 (441)
                                 +....|+||||+. |+|.+++..+++++..++.++.||+.||+|||++||+||||||+|||++ .++.+
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  160 (320)
T 2i6l_A           82 SQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVL  160 (320)
T ss_dssp             CBCCC----CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEE
T ss_pred             cccccccccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeE
Confidence                       4478999999997 5999999988999999999999999999999999999999999999997 56789


Q ss_pred             EEeecCccccccccc-cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC
Q 013522          158 KVTDFGLSAFSEHLK-QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG  236 (441)
Q Consensus       158 kl~DFGla~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~  236 (441)
                      ||+|||++....... .........||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+...
T Consensus       161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  240 (320)
T 2i6l_A          161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES  240 (320)
T ss_dssp             EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            999999998654221 1223445678999999999876555568999999999999999999999988876666555432


Q ss_pred             CCC------------------------------CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          237 DFK------------------------------CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       237 ~~~------------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ...                              .++.+++++.+||.+||+.||++|||+.++++||||+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            110                              1245799999999999999999999999999999998643


No 121
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-49  Score=395.84  Aligned_cols=260  Identities=33%  Similarity=0.585  Sum_probs=224.0

Q ss_pred             cCCeEEeeeecccCceEEEEEEEc---CCCcEEEEEEeeccccc-chhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNL---QTGKSMAMKVVGKDKVI-KVGMMEQIKREISVMKMV-KHKHIVELHEVMASKS   92 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~   92 (441)
                      .++|++++.||+|+||+||+|++.   .+++.||+|++.+.... .....+.+.+|+.+|+.+ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            378999999999999999999985   58999999999764321 112235567899999999 6999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .+|+||||+.|++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~  212 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD  212 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred             eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence            99999999999999999976 78999999999999999999999999999999999999999999999999999754322


Q ss_pred             ccCCcccccccCCCccchhhhhcc-CCCCCcccHHHHHHHHHHHhhCCCCCCCC----cHHHHHHHHHcCCCCCCCCCCH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKK-GYDGAKADIWSCGVILYVLLAGFLPFQDD----NIVSMYRKIYRGDFKCPPWFSS  246 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~-~~~~~~~DiwSlGvil~~ll~G~~Pf~~~----~~~~~~~~i~~~~~~~~~~~~~  246 (441)
                       ........+||+.|+|||++.+. ...+.++|||||||++|+|++|..||...    ....+...+.......|+.+++
T Consensus       213 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (355)
T 1vzo_A          213 -ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA  291 (355)
T ss_dssp             -GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCH
T ss_pred             -CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccCH
Confidence             12233456899999999999753 23458899999999999999999999743    4456667777778888899999


Q ss_pred             HHHHHHHHhcCCCCCCCC-----CHHHHhcCcccCcc
Q 013522          247 EARRLITKLLDPNPNSRI-----AISKIMESSWFKKS  278 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~-----t~~eil~hpwf~~~  278 (441)
                      .+.+||.+||..||.+||     |+.++++||||+..
T Consensus       292 ~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          292 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            999999999999999999     99999999999853


No 122
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=3.2e-49  Score=391.06  Aligned_cols=263  Identities=27%  Similarity=0.429  Sum_probs=220.1

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC--
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK--   91 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--   91 (441)
                      ...+.++|++.+.||+|+||+||+|++..+|+.||+|++....  .......+.+|+.+++.++||||+++++++...  
T Consensus         6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   83 (353)
T 2b9h_A            6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSF   83 (353)
T ss_dssp             CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCS
T ss_pred             ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeeccccc
Confidence            3457789999999999999999999999999999999996432  234456788999999999999999999998654  


Q ss_pred             ---CEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           92 ---SKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        92 ---~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                         ...|+||||+. ++|.+.+..+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        84 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           84 ENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII  162 (353)
T ss_dssp             TTCCCEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CccceEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence               67999999997 58999998888999999999999999999999999999999999999999999999999999765


Q ss_pred             cccccC--------CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHc--CC-
Q 013522          169 EHLKQD--------GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYR--GD-  237 (441)
Q Consensus       169 ~~~~~~--------~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~--~~-  237 (441)
                      ......        ......+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+..  +. 
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (353)
T 2b9h_A          163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP  242 (353)
T ss_dssp             C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence            432111        1123457999999999987655556899999999999999999999998876554443321  00 


Q ss_pred             ---------------------CC--------CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          238 ---------------------FK--------CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       238 ---------------------~~--------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                           ..        .++.+++++.+||.+||..||++|||+.++++||||+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence                                 00        1245789999999999999999999999999999998654


No 123
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.3e-49  Score=380.79  Aligned_cols=259  Identities=30%  Similarity=0.521  Sum_probs=226.3

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS--KSKI   94 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~   94 (441)
                      ..++|++++.||+|+||+||+|++..+++.||+|++...... ....+.+.+|+.+++.++||||+++++++.+  ....
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   82 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence            357899999999999999999999999999999999865432 3456789999999999999999999998854  6789


Q ss_pred             EEEEeccCCCchHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcC-----cEeccCCCCcEEeCCCCCeEEeecCc
Q 013522           95 YFAMDLVKGGELFNKIAK-----GRLREDVARVYFQQLISAVDFCHSRG-----VYHRDLKPENLLLDEDGNLKVTDFGL  164 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-----~~l~~~~~~~~~~qll~aL~ylH~~g-----i~HrDLkp~NILl~~~~~vkl~DFGl  164 (441)
                      |+||||++|++|.+++..     ..+++..++.++.||+.||.|||++|     |+||||||+|||++.++.+||+|||+
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~  162 (279)
T 2w5a_A           83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  162 (279)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred             EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence            999999999999999964     24999999999999999999999999     99999999999999999999999999


Q ss_pred             cccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC-CCCCC
Q 013522          165 SAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF-KCPPW  243 (441)
Q Consensus       165 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~-~~~~~  243 (441)
                      +......  .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+...+...+..+.. ..|..
T Consensus       163 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~  239 (279)
T 2w5a_A          163 ARILNHD--TSFAKTFVGTPYYMSPEQMNRMSY-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR  239 (279)
T ss_dssp             HHHC-----CHHHHHHHSCCTTCCHHHHHCC-C-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTT
T ss_pred             heeeccc--cccccccCCCccccChHHhccCCC-CchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcc
Confidence            8754321  112335679999999999987766 4899999999999999999999999988888888887765 56778


Q ss_pred             CCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          244 FSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       244 ~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      +++++.++|.+||+.||.+|||+.++++|+|+....
T Consensus       240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          240 YSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence            999999999999999999999999999999997643


No 124
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=5e-50  Score=396.11  Aligned_cols=259  Identities=24%  Similarity=0.514  Sum_probs=227.9

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchh--------------hHHHHHHHHHHHHhCCCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVG--------------MMEQIKREISVMKMVKHK   79 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~--------------~~~~~~~Ei~il~~l~hp   79 (441)
                      .....++|++++.||+|+||+||+|++  +|+.||+|++.........              ..+.+.+|+.+++.++||
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~  103 (348)
T 2pml_X           26 KDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNE  103 (348)
T ss_dssp             SCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCT
T ss_pred             cccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCC
Confidence            445678999999999999999999999  9999999999765432211              127899999999999999


Q ss_pred             CcceEEEEEEeCCEEEEEEeccCCCchHHH------Hhc---CCCCHHHHHHHHHHHHHHHHHHhh-cCcEeccCCCCcE
Q 013522           80 HIVELHEVMASKSKIYFAMDLVKGGELFNK------IAK---GRLREDVARVYFQQLISAVDFCHS-RGVYHRDLKPENL  149 (441)
Q Consensus        80 nIv~l~~~~~~~~~~~lv~E~~~gg~L~~~------i~~---~~l~~~~~~~~~~qll~aL~ylH~-~gi~HrDLkp~NI  149 (441)
                      ||+++++++.+.+..|+||||+.|++|.++      +..   +.+++..++.++.||+.||.|||+ +||+||||||+||
T Consensus       104 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Ni  183 (348)
T 2pml_X          104 YCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNI  183 (348)
T ss_dssp             TBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGE
T ss_pred             CcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhE
Confidence            999999999999999999999999999998      653   579999999999999999999999 9999999999999


Q ss_pred             EeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhcc-CCCCCcccHHHHHHHHHHHhhCCCCCCCCcH-H
Q 013522          150 LLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKK-GYDGAKADIWSCGVILYVLLAGFLPFQDDNI-V  227 (441)
Q Consensus       150 Ll~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~-~  227 (441)
                      |++.++.+||+|||++.....    .......||+.|+|||++.+. .+.+.++|||||||++|+|++|..||...+. .
T Consensus       184 l~~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  259 (348)
T 2pml_X          184 LMDKNGRVKLSDFGESEYMVD----KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV  259 (348)
T ss_dssp             EECTTSCEEECCCTTCEECBT----TEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred             EEcCCCcEEEecccccccccc----ccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence            999999999999999875432    234556799999999999876 4543489999999999999999999998776 7


Q ss_pred             HHHHHHHcCCCCCC-------------------CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          228 SMYRKIYRGDFKCP-------------------PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       228 ~~~~~i~~~~~~~~-------------------~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      .....+..+....|                   +.+++++.+||.+||+.||.+|||+.++++||||+..
T Consensus       260 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          260 ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence            78888888877776                   6689999999999999999999999999999999864


No 125
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=2.6e-49  Score=383.05  Aligned_cols=260  Identities=30%  Similarity=0.445  Sum_probs=221.1

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      ....++|++++.||+|+||+||+|++..+++.||+|++.....   ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   91 (302)
T 2j7t_A           15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE---EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKL   91 (302)
T ss_dssp             SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CE
T ss_pred             cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH---HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeE
Confidence            4567899999999999999999999999999999999865432   3357888999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      |+||||++|++|.+++..  +.+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus        92 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence            999999999999998864  679999999999999999999999999999999999999999999999999876432211


Q ss_pred             cCCcccccccCCCccchhhhh----ccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCC---CCCCCC
Q 013522          173 QDGLLHTTCGTPAYVAPEVIS----KKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFK---CPPWFS  245 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~----~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~  245 (441)
                        .......||+.|+|||++.    .....+.++|||||||++|+|++|..||...+.......+.....+   .+..++
T Consensus       172 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (302)
T 2j7t_A          172 --QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS  249 (302)
T ss_dssp             --HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSC
T ss_pred             --cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccC
Confidence              1223457999999999984    2233358999999999999999999999998887777777665433   355689


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ..+.+||.+||..||.+|||+.++++||||+...
T Consensus       250 ~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          250 VEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            9999999999999999999999999999998654


No 126
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=3e-49  Score=385.46  Aligned_cols=258  Identities=24%  Similarity=0.388  Sum_probs=216.3

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      ..+..++|++.+.||+|+||+||+|++  +|+.||+|++..... .....+.+.+|+.++++++||||+++++++.+...
T Consensus        32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           32 MDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred             ccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence            356678999999999999999999987  788999999976543 23456788999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhcCC----CCHHHHHHHHHHHHHHHHHHhhcC--cEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           94 IYFAMDLVKGGELFNKIAKGR----LREDVARVYFQQLISAVDFCHSRG--VYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~~~----l~~~~~~~~~~qll~aL~ylH~~g--i~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      .|+||||+.||+|.+++....    +++..+..++.||+.||+|||++|  |+||||||+|||++.++.+||+|||++..
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL  188 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred             eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence            999999999999999998633    999999999999999999999999  99999999999999999999999999875


Q ss_pred             ccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHH--cCCCCCCCCCC
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIY--RGDFKCPPWFS  245 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~  245 (441)
                      ....  .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+.  ......|..++
T Consensus       189 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (309)
T 3p86_A          189 KAST--FLSSKSAAGTPEWMAPEVLRDEPS-NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN  265 (309)
T ss_dssp             ---------------CCTTSCHHHHTTCCC-CTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSC
T ss_pred             cccc--ccccccCCCCccccChhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCC
Confidence            3321  222345679999999999988776 589999999999999999999999988877776663  34556788899


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhc--CcccCc
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIME--SSWFKK  277 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~--hpwf~~  277 (441)
                      +.+.+||.+||..||.+|||+.++++  .+|++.
T Consensus       266 ~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          266 PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999999987  455543


No 127
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=5.9e-49  Score=385.60  Aligned_cols=252  Identities=25%  Similarity=0.463  Sum_probs=212.6

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCcceEEEEEEe--CCE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-HKHIVELHEVMAS--KSK   93 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~--~~~   93 (441)
                      ..++|++++.||+|+||+||+|++..+++.||+|++....      .+.+.+|+.+++.++ ||||+++++++.+  ...
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~  107 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRT  107 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence            3578999999999999999999999999999999986432      367889999999997 9999999999987  678


Q ss_pred             EEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC-CeEEeecCccccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG-NLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~-~vkl~DFGla~~~~~~~  172 (441)
                      .++||||+.+++|.+++..  +++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++.....  
T Consensus       108 ~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~--  183 (330)
T 3nsz_A          108 PALVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--  183 (330)
T ss_dssp             EEEEEECCCCCCHHHHGGG--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT--
T ss_pred             eEEEEeccCchhHHHHHHh--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC--
Confidence            9999999999999998854  89999999999999999999999999999999999999777 899999999975432  


Q ss_pred             cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC-cHHHH-------------HHHHHcCCC
Q 013522          173 QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD-NIVSM-------------YRKIYRGDF  238 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~-~~~~~-------------~~~i~~~~~  238 (441)
                       .......+||+.|+|||++.+....+.++|||||||++|+|++|..||... +....             ...+.....
T Consensus       184 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  262 (330)
T 3nsz_A          184 -GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI  262 (330)
T ss_dssp             -TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred             -CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence             233456789999999999987555569999999999999999999999543 22111             111222222


Q ss_pred             CC------------------------CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          239 KC------------------------PPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       239 ~~------------------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ..                        +..+++++.+||.+||++||.+|||+.++|+||||+...
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence            11                        122789999999999999999999999999999998643


No 128
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=2.5e-49  Score=381.05  Aligned_cols=259  Identities=34%  Similarity=0.622  Sum_probs=228.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      ...+.++|++++.||+|+||+||+|++..+++.||+|++...... ......+.+|+.+++.++||||+++++++.+.+.
T Consensus        17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   95 (287)
T 2wei_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSS   95 (287)
T ss_dssp             THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence            456788999999999999999999999999999999999765432 2345788999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC---CeEEeecCcccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG---NLKVTDFGLSAFSE  169 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~---~vkl~DFGla~~~~  169 (441)
                      .|+||||+.+++|.+.+.. +.+++..+..++.||+.||.|||++||+||||||+||+++.++   .+||+|||++....
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A           96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            9999999999999998865 7899999999999999999999999999999999999997644   69999999987543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCC----CCCC
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCP----PWFS  245 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~  245 (441)
                      .   ........||+.|+|||++.+. + +.++|||||||++|+|++|..||.+.+.......+..+....+    ..++
T Consensus       176 ~---~~~~~~~~~~~~y~aPE~~~~~-~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T 2wei_A          176 Q---NTKMKDRIGTAYYIAPEVLRGT-Y-DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTIS  250 (287)
T ss_dssp             C---CSSCSCHHHHHTTCCHHHHTTC-C-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSC
T ss_pred             C---CCccccccCcccccChHHhcCC-C-CCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcC
Confidence            2   2233455689999999998754 4 5899999999999999999999999998888888888765543    4589


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      +++.+||.+||.+||.+|||+.++++||||++.
T Consensus       251 ~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            999999999999999999999999999999753


No 129
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.7e-49  Score=388.63  Aligned_cols=261  Identities=34%  Similarity=0.651  Sum_probs=216.5

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeeccccc-----chhhHHHHHHHHHHHHhCCCCCcceEEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVI-----KVGMMEQIKREISVMKMVKHKHIVELHEVM   88 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~   88 (441)
                      +..+.++|++.+.||+|+||+||+|++..+++.||+|++......     .......+.+|+.+++.++||||+++++++
T Consensus         5 ~~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   84 (322)
T 2ycf_A            5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF   84 (322)
T ss_dssp             CHHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEE
Confidence            455778999999999999999999999999999999999765431     112234578999999999999999999999


Q ss_pred             EeCCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC---eEEeecCc
Q 013522           89 ASKSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN---LKVTDFGL  164 (441)
Q Consensus        89 ~~~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~---vkl~DFGl  164 (441)
                      .... .|+||||+.|++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||+
T Consensus        85 ~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A           85 DAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             ESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred             cCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence            7665 8999999999999999875 67999999999999999999999999999999999999987765   99999999


Q ss_pred             cccccccccCCcccccccCCCccchhhhhc--cCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHHcCCCCCC
Q 013522          165 SAFSEHLKQDGLLHTTCGTPAYVAPEVISK--KGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV-SMYRKIYRGDFKCP  241 (441)
Q Consensus       165 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~--~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~  241 (441)
                      +.....   .......+||+.|+|||++..  ....+.++|||||||++|+|++|..||...... .+...+..+....+
T Consensus       164 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  240 (322)
T 2ycf_A          164 SKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI  240 (322)
T ss_dssp             CEECCC---CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCC
T ss_pred             ceeccc---ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccC
Confidence            875432   222345679999999999852  233358999999999999999999999765432 34445555555443


Q ss_pred             ----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          242 ----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       242 ----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                          ..+++.+.+||.+||..||++|||+.++++||||+..
T Consensus       241 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence                4579999999999999999999999999999999864


No 130
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=2.2e-49  Score=381.13  Aligned_cols=258  Identities=23%  Similarity=0.353  Sum_probs=203.7

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      .+..++|++++.||+|+||+||+|++..+|+.||+|++...... ......+.++...++.++||||+++++++.+.+..
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~   81 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV   81 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc-HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence            35678999999999999999999999999999999999755322 22334455566668889999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhc-CcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           95 YFAMDLVKGGELFNKIAK-----GRLREDVARVYFQQLISAVDFCHSR-GVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~-----~~l~~~~~~~~~~qll~aL~ylH~~-gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                      |+||||+.| +|.+++..     +.+++..++.++.||+.||.|||++ ||+||||||+||+++.++.+||+|||++...
T Consensus        82 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           82 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             EEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            999999975 77776642     5799999999999999999999998 9999999999999999999999999998754


Q ss_pred             cccccCCcccccccCCCccchhhhh---ccCCCCCcccHHHHHHHHHHHhhCCCCCCC-Cc-HHHHHHHHHcCCCCCC-C
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVIS---KKGYDGAKADIWSCGVILYVLLAGFLPFQD-DN-IVSMYRKIYRGDFKCP-P  242 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~---~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~-~~-~~~~~~~i~~~~~~~~-~  242 (441)
                      ..   .......+||+.|+|||++.   .....+.++|||||||++|+|++|..||.. .. .......+.......+ .
T Consensus       161 ~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  237 (290)
T 3fme_A          161 VD---DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD  237 (290)
T ss_dssp             ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTT
T ss_pred             cc---cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccc
Confidence            33   22334457999999999972   333345899999999999999999999985 23 3333334444444433 4


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          243 WFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       243 ~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      .+++++.+||.+||+.||++|||+.++++||||+.
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          238 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             cCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence            68999999999999999999999999999999975


No 131
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.7e-49  Score=388.53  Aligned_cols=268  Identities=23%  Similarity=0.364  Sum_probs=205.2

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCc---EEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEE
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGK---SMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVM   88 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~---~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~   88 (441)
                      ....+..++|++++.||+|+||+||+|++..++.   .||+|++....... ...+.+.+|+.+++.++||||+++++++
T Consensus        16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            3445677899999999999999999999877765   89999997654332 4467899999999999999999999999


Q ss_pred             EeCCEE------EEEEeccCCCchHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC
Q 013522           89 ASKSKI------YFAMDLVKGGELFNKIAKG-------RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG  155 (441)
Q Consensus        89 ~~~~~~------~lv~E~~~gg~L~~~i~~~-------~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~  155 (441)
                      ......      ++||||+.+|+|.+++...       .+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC
Confidence            877655      9999999999999998641       589999999999999999999999999999999999999999


Q ss_pred             CeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHH
Q 013522          156 NLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIY  234 (441)
Q Consensus       156 ~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~  234 (441)
                      .+||+|||++................+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+.
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~  253 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLY-TVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI  253 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhhcCCCC-CCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh
Confidence            999999999976544332233344557889999999988776 489999999999999999 999999988888777777


Q ss_pred             cCC-CCCCCCCCHHHHHHHHHhcCCCCCCCCC-------HHHHhcCcccCccCCc
Q 013522          235 RGD-FKCPPWFSSEARRLITKLLDPNPNSRIA-------ISKIMESSWFKKSAPK  281 (441)
Q Consensus       235 ~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t-------~~eil~hpwf~~~~~~  281 (441)
                      .+. ...++.+++++.+||.+||+.||.+|||       +++++.|||+......
T Consensus       254 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~  308 (323)
T 3qup_A          254 GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQD  308 (323)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---------
T ss_pred             cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCC
Confidence            654 5667789999999999999999999999       7888999999865443


No 132
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=5.3e-50  Score=387.55  Aligned_cols=267  Identities=27%  Similarity=0.464  Sum_probs=199.1

Q ss_pred             CCCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           11 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        11 ~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      ..+..+..++|++.+.||+|+||+||+|.+..+++.||+|++......  ...+.+.+|+.+++.++||||+++++++..
T Consensus         7 ~~p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   84 (303)
T 2vwi_A            7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHHPNIVSYYTSFVV   84 (303)
T ss_dssp             ------CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEES
T ss_pred             ccccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhcCCCCEeeEEEEEee
Confidence            345667789999999999999999999999899999999998654321  235678899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEee
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK---------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTD  161 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~---------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~D  161 (441)
                      .+..|+||||+.|++|.+++..         +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~d  164 (303)
T 2vwi_A           85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIAD  164 (303)
T ss_dssp             SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECC
T ss_pred             cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEe
Confidence            9999999999999999999862         4589999999999999999999999999999999999999999999999


Q ss_pred             cCccccccccc---cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC
Q 013522          162 FGLSAFSEHLK---QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF  238 (441)
Q Consensus       162 FGla~~~~~~~---~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~  238 (441)
                      ||++.......   ........+||+.|+|||++.+....+.++|||||||++|+|++|..||...+.............
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  244 (303)
T 2vwi_A          165 FGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP  244 (303)
T ss_dssp             CHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSC
T ss_pred             ccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCC
Confidence            99987543221   112234567999999999997633345899999999999999999999988766555444443322


Q ss_pred             C----------CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          239 K----------CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       239 ~----------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      .          .+..+++++.+||.+||+.||.+|||+.++++||||+...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             CCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             CccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence            1          2245788999999999999999999999999999998643


No 133
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=8.8e-49  Score=383.67  Aligned_cols=259  Identities=27%  Similarity=0.435  Sum_probs=216.9

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEe---
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMAS---   90 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~---   90 (441)
                      ....++|++++.||+|+||+||+|++..+|+.||+|++.....    ..+.+.+|+.+++.+ +||||+++++++..   
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   95 (326)
T 2x7f_A           20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP   95 (326)
T ss_dssp             CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred             cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence            3467899999999999999999999999999999999975432    236788999999998 89999999999977   


Q ss_pred             ---CCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCc
Q 013522           91 ---KSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGL  164 (441)
Q Consensus        91 ---~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGl  164 (441)
                         .+..|+||||+.+++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~  175 (326)
T 2x7f_A           96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV  175 (326)
T ss_dssp             -CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred             ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcC
Confidence               5689999999999999999975   5699999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccCCcccccccCCCccchhhhhc----cCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCC-
Q 013522          165 SAFSEHLKQDGLLHTTCGTPAYVAPEVISK----KGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFK-  239 (441)
Q Consensus       165 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~----~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~-  239 (441)
                      +......  .......+||+.|+|||++..    ....+.++|||||||++|+|++|..||.+.+.......+.....+ 
T Consensus       176 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  253 (326)
T 2x7f_A          176 SAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR  253 (326)
T ss_dssp             TC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC
T ss_pred             ceecCcC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccc
Confidence            8754321  122345679999999999862    223358899999999999999999999988877666666554332 


Q ss_pred             -CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          240 -CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       240 -~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                       .+..+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus       254 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  294 (326)
T 2x7f_A          254 LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP  294 (326)
T ss_dssp             CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred             CCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence             2456899999999999999999999999999999998644


No 134
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=2.5e-49  Score=398.97  Aligned_cols=255  Identities=27%  Similarity=0.431  Sum_probs=210.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS-   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-   92 (441)
                      +.....+|++++.||+|+||+||+|++..+++ +|+|.+......       ..+|+.+|+.++||||+++++++.... 
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~  106 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGD  106 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESS
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCC
Confidence            34566789999999999999999999977766 888887654322       237999999999999999999995543 


Q ss_pred             -----EEEEEEeccCCCchHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC-CCCCeEEeec
Q 013522           93 -----KIYFAMDLVKGGELFNKIA----KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD-EDGNLKVTDF  162 (441)
Q Consensus        93 -----~~~lv~E~~~gg~L~~~i~----~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~-~~~~vkl~DF  162 (441)
                           .+|+||||+.++.+.....    .+.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+||
T Consensus       107 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DF  186 (394)
T 4e7w_A          107 KKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF  186 (394)
T ss_dssp             SSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             CCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeC
Confidence                 3889999998754333221    36799999999999999999999999999999999999999 7899999999


Q ss_pred             CccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC------
Q 013522          163 GLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG------  236 (441)
Q Consensus       163 Gla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~------  236 (441)
                      |+|+....   .......+||+.|+|||++.+....+.++|||||||++|+|++|.+||.+.+.......+.+.      
T Consensus       187 G~a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~  263 (394)
T 4e7w_A          187 GSAKILIA---GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSR  263 (394)
T ss_dssp             TTCEECCT---TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             CCcccccC---CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence            99975432   233446679999999999987665569999999999999999999999998876666555431      


Q ss_pred             -----------CCC------------CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          237 -----------DFK------------CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       237 -----------~~~------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                 ...            +++.+++++.+||.+||++||.+|||+.++++||||+...
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             HHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             HHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence                       001            2344789999999999999999999999999999998643


No 135
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=7.3e-51  Score=407.60  Aligned_cols=248  Identities=18%  Similarity=0.260  Sum_probs=205.8

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHH---HHHhCCCCCcceEE-------EE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREIS---VMKMVKHKHIVELH-------EV   87 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~---il~~l~hpnIv~l~-------~~   87 (441)
                      .++|++.+.||+|+||+||+|++..+|+.||||++...........+.+.+|+.   +++.++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            478999999999999999999999999999999998665545556788999995   45555899999998       77


Q ss_pred             EEeCCE-----------------EEEEEeccCCCchHHHHhc-CCCCH-------HHHHHHHHHHHHHHHHHhhcCcEec
Q 013522           88 MASKSK-----------------IYFAMDLVKGGELFNKIAK-GRLRE-------DVARVYFQQLISAVDFCHSRGVYHR  142 (441)
Q Consensus        88 ~~~~~~-----------------~~lv~E~~~gg~L~~~i~~-~~l~~-------~~~~~~~~qll~aL~ylH~~gi~Hr  142 (441)
                      +.+.+.                 .|+||||+ +|+|.+++.. +.+++       ..+..++.||+.||+|||++||+||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr  230 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  230 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            776542                 89999999 6799999975 44555       7888899999999999999999999


Q ss_pred             cCCCCcEEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhcc-----------CCCCCcccHHHHHHHH
Q 013522          143 DLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKK-----------GYDGAKADIWSCGVIL  211 (441)
Q Consensus       143 DLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~-----------~~~~~~~DiwSlGvil  211 (441)
                      ||||+|||++.++.+||+|||+|....     ......+| +.|+|||++.+.           .+ +.++|||||||++
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~-~~~~DvwSlG~il  303 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLM-TFSFDAWALGLVI  303 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEEC-CHHHHHHHHHHHH
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhcccccccccccccccC-ChhhhHHHHHHHH
Confidence            999999999999999999999987422     23456678 999999999877           56 5899999999999


Q ss_pred             HHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          212 YVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       212 ~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      |+|++|..||.+.+.......+.    ..++.+++++.+||.+||+.||++|||+.++++||||+.
T Consensus       304 ~elltg~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          304 YWIWCADLPITKDAALGGSEWIF----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             HHHHHSSCCC------CCSGGGG----SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             HHHHHCCCCCcccccccchhhhh----hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            99999999998766544333332    234568999999999999999999999999999999974


No 136
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.6e-48  Score=379.88  Aligned_cols=258  Identities=25%  Similarity=0.450  Sum_probs=218.9

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      ....++|++.+.||+|+||+||+|.+..+|+.||+|++.....     .+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   99 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDL   99 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEE
Confidence            4567889999999999999999999999999999999976532     35788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           95 YFAMDLVKGGELFNKIA--KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~--~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      |+||||+.|++|.+++.  .+.+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++...... 
T Consensus       100 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-  178 (314)
T 3com_A          100 WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT-  178 (314)
T ss_dssp             EEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT-
T ss_pred             EEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh-
Confidence            99999999999999986  367999999999999999999999999999999999999999999999999998754321 


Q ss_pred             cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCC---CCCCCCCCHHHH
Q 013522          173 QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGD---FKCPPWFSSEAR  249 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~  249 (441)
                       ........||+.|+|||++.+..+. .++|||||||++|+|++|..||...+.......+....   ...+..+++.+.
T Consensus       179 -~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (314)
T 3com_A          179 -MAKRNTVIGTPFWMAPEVIQEIGYN-CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFT  256 (314)
T ss_dssp             -BSCBCCCCSCGGGCCHHHHSSSCBC-TTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHH
T ss_pred             -ccccCccCCCCCccChhhcCCCCCC-ccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHH
Confidence             1223456799999999999877664 88999999999999999999999887766555554443   233556899999


Q ss_pred             HHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          250 RLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       250 ~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      +||.+||..||.+|||+.++++||||+....
T Consensus       257 ~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~  287 (314)
T 3com_A          257 DFVKQCLVKSPEQRATATQLLQHPFVRSAKG  287 (314)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred             HHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence            9999999999999999999999999986543


No 137
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=7.4e-49  Score=392.32  Aligned_cols=255  Identities=22%  Similarity=0.412  Sum_probs=221.7

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEc-------CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNL-------QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHE   86 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~-------~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~   86 (441)
                      ....++|++++.||+|+||+||+|++.       .++..||+|++....  .....+.+.+|+.+|+.+ +||||+++++
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  154 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG  154 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            345678999999999999999999975       345679999997553  234567899999999999 8999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHhcC-----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcE
Q 013522           87 VMASKSKIYFAMDLVKGGELFNKIAKG-----------------RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENL  149 (441)
Q Consensus        87 ~~~~~~~~~lv~E~~~gg~L~~~i~~~-----------------~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NI  149 (441)
                      ++.+.+.+|+||||+.||+|.+++...                 .+++..+..++.||+.||.|||++||+||||||+||
T Consensus       155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  234 (370)
T 2psq_A          155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  234 (370)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence            999999999999999999999999752                 378999999999999999999999999999999999


Q ss_pred             EeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHH
Q 013522          150 LLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVS  228 (441)
Q Consensus       150 Ll~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~  228 (441)
                      |++.++.+||+|||++................||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+...
T Consensus       235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~ellt~g~~p~~~~~~~~  313 (370)
T 2psq_A          235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  313 (370)
T ss_dssp             EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCC-CcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            999999999999999985543332233344567899999999988776 489999999999999999 999999988888


Q ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          229 MYRKIYRGD-FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       229 ~~~~i~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +...+..+. ...|..+++++.+||.+||+.||.+|||+.+++++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          314 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            877777664 45677899999999999999999999999999864


No 138
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=2e-49  Score=393.65  Aligned_cols=260  Identities=27%  Similarity=0.373  Sum_probs=205.1

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      .......++|++.+.||+|+||+||+|++..+|+.||+|++.......    ....+++..++.++||||+++++++...
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~l~~l~h~niv~~~~~~~~~   91 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR----NRELQIMQDLAVLHHPNIVQLQSYFYTL   91 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC----CHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc----HHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence            334566789999999999999999999999999999999986654322    3556788888999999999999999654


Q ss_pred             CE-------EEEEEeccCCCchHHHH----hc-CCCCHHHHHHHHHHHHHHHHHHh--hcCcEeccCCCCcEEeCC-CCC
Q 013522           92 SK-------IYFAMDLVKGGELFNKI----AK-GRLREDVARVYFQQLISAVDFCH--SRGVYHRDLKPENLLLDE-DGN  156 (441)
Q Consensus        92 ~~-------~~lv~E~~~gg~L~~~i----~~-~~l~~~~~~~~~~qll~aL~ylH--~~gi~HrDLkp~NILl~~-~~~  156 (441)
                      ..       +++||||+.++ |...+    .. ..+++..++.++.|++.||.|||  ++||+||||||+|||++. ++.
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A           92 GERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             CSSCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTE
T ss_pred             ccccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCc
Confidence            33       89999999875 44333    22 56899999999999999999999  999999999999999997 899


Q ss_pred             eEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC
Q 013522          157 LKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG  236 (441)
Q Consensus       157 vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~  236 (441)
                      +||+|||++.....   .......+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+....+..+.+.
T Consensus       171 ~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~  247 (360)
T 3e3p_A          171 LKLCDFGSAKKLSP---SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV  247 (360)
T ss_dssp             EEECCCTTCBCCCT---TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             EEEeeCCCceecCC---CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence            99999999975443   233445679999999999977665579999999999999999999999998877766665431


Q ss_pred             C--------------------------------CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          237 D--------------------------------FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       237 ~--------------------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      .                                ...+...++++.+||.+||++||.+|||+.++++||||+...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence            0                                011122567899999999999999999999999999998654


No 139
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=5.8e-49  Score=393.08  Aligned_cols=256  Identities=26%  Similarity=0.429  Sum_probs=215.9

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE-
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI-   94 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~-   94 (441)
                      .+.++|++.+.||+|+||+||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++...+.. 
T Consensus        39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  117 (371)
T 4exu_A           39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR  117 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST
T ss_pred             cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc-chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc
Confidence            367899999999999999999999999999999999976432 334567888999999999999999999999877654 


Q ss_pred             -----EEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           95 -----YFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        95 -----~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                           |+||||+. ++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       118 ~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          118 NFYDFYLVMPFMQ-TDLQKIMGM-EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             TCCCCEEEEECCC-EEHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             cceeEEEEEcccc-ccHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence                 99999997 588877754 49999999999999999999999999999999999999999999999999997543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCC------------
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGD------------  237 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~------------  237 (441)
                      .     .....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+..+....+....            
T Consensus       196 ~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  270 (371)
T 4exu_A          196 A-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN  270 (371)
T ss_dssp             ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred             c-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence            2     23456799999999999874445689999999999999999999999988766665553310            


Q ss_pred             -------------C------CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          238 -------------F------KCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       238 -------------~------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                   .      ..++.+++.+.+||.+||++||++|||+.++++||||+...
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence                         0      01235689999999999999999999999999999998543


No 140
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=8.4e-49  Score=398.45  Aligned_cols=251  Identities=30%  Similarity=0.441  Sum_probs=208.9

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK-----   91 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----   91 (441)
                      ...+|++++.||+|+||+||+|++..+|+.||||++.....       ...+|+.+|+.++||||+++++++...     
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTT
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCc
Confidence            34579999999999999999999999999999999875432       233799999999999999999998532     


Q ss_pred             -CEEEEEEeccCCCchHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC-CCeEEeecCc
Q 013522           92 -SKIYFAMDLVKGGELFNKIA-----KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED-GNLKVTDFGL  164 (441)
Q Consensus        92 -~~~~lv~E~~~gg~L~~~i~-----~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~-~~vkl~DFGl  164 (441)
                       ..+++||||+.+ +|.+.+.     ...+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+
T Consensus       125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~  203 (420)
T 1j1b_A          125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS  203 (420)
T ss_dssp             EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchh
Confidence             247799999986 5655553     2679999999999999999999999999999999999999965 5689999999


Q ss_pred             cccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--------
Q 013522          165 SAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--------  236 (441)
Q Consensus       165 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--------  236 (441)
                      ++....   .......+||+.|+|||++.+....+.++|||||||++|+|++|++||.+.+..+.+..+.+.        
T Consensus       204 a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~  280 (420)
T 1j1b_A          204 AKQLVR---GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ  280 (420)
T ss_dssp             CEECCT---TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             hhhccc---CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            975432   223445689999999999977644568999999999999999999999998766655554321        


Q ss_pred             ---------CCC------------CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          237 ---------DFK------------CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       237 ---------~~~------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                               .+.            +++.+++++.+||.+||.+||.+|||+.++++||||+..
T Consensus       281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence                     111            234568999999999999999999999999999999754


No 141
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.3e-49  Score=387.23  Aligned_cols=256  Identities=24%  Similarity=0.419  Sum_probs=213.6

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS-   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-   92 (441)
                      ...+.++|++.+.||+|+||+||+|++..+++.||+|++......  ...+.+.+|+.+++.++||||+++++++.... 
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   81 (319)
T 4euu_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT   81 (319)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT
T ss_pred             ccCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEeecCCC
Confidence            346778999999999999999999999999999999999765432  23567789999999999999999999998765 


Q ss_pred             -EEEEEEeccCCCchHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe----CCCCCeEEeecC
Q 013522           93 -KIYFAMDLVKGGELFNKIAKG----RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL----DEDGNLKVTDFG  163 (441)
Q Consensus        93 -~~~lv~E~~~gg~L~~~i~~~----~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl----~~~~~vkl~DFG  163 (441)
                       ..|+||||+.|++|.+++...    .+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg  161 (319)
T 4euu_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (319)
T ss_dssp             CCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred             ceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence             889999999999999999752    39999999999999999999999999999999999999    778889999999


Q ss_pred             ccccccccccCCcccccccCCCccchhhhhc-------cCCCCCcccHHHHHHHHHHHhhCCCCCCCC----cHHHHHHH
Q 013522          164 LSAFSEHLKQDGLLHTTCGTPAYVAPEVISK-------KGYDGAKADIWSCGVILYVLLAGFLPFQDD----NIVSMYRK  232 (441)
Q Consensus       164 la~~~~~~~~~~~~~~~~gt~~y~APE~l~~-------~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~----~~~~~~~~  232 (441)
                      ++.....   .......+||+.|+|||++..       ....+.++|||||||++|+|++|..||...    .......+
T Consensus       162 ~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  238 (319)
T 4euu_A          162 AARELED---DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK  238 (319)
T ss_dssp             TCEECCT---TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHH
T ss_pred             CceecCC---CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHH
Confidence            9975433   233456679999999999863       233458999999999999999999999642    23445555


Q ss_pred             HHcCCCC-------------------CC------CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcc
Q 013522          233 IYRGDFK-------------------CP------PWFSSEARRLITKLLDPNPNSRIAISKIMESSW  274 (441)
Q Consensus       233 i~~~~~~-------------------~~------~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpw  274 (441)
                      +..+.+.                   .|      ..+++.+.+||++||+.||++|||++|+|+||=
T Consensus       239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             HHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             HhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            5443321                   11      123467889999999999999999999999873


No 142
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.5e-49  Score=395.22  Aligned_cols=259  Identities=20%  Similarity=0.291  Sum_probs=224.8

Q ss_pred             ccccCCeEEeeeecccCceEEEEEE-----EcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLAR-----NLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~-----~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      .+..++|++++.||+|+||+||+|+     +..+++.||+|++....  .......+.+|+.+++.++||||+++++++.
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~  144 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSL  144 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            4556889999999999999999999     45578899999996432  2344567889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC---CeE
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK--------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG---NLK  158 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~--------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~---~vk  158 (441)
                      +....|+||||+.||+|.+++..        ..+++..+..++.||+.||.|||++||+||||||+|||++.+|   .+|
T Consensus       145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k  224 (367)
T 3l9p_A          145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK  224 (367)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence            99999999999999999999975        2489999999999999999999999999999999999999655   499


Q ss_pred             EeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC
Q 013522          159 VTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD  237 (441)
Q Consensus       159 l~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~  237 (441)
                      |+|||+|+...............||+.|+|||++.+..+. .++|||||||++|+|++ |..||...+.......+..+.
T Consensus       225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~  303 (367)
T 3l9p_A          225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFT-SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG  303 (367)
T ss_dssp             ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC
T ss_pred             ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            9999999765443333444566789999999999887764 89999999999999998 999999999988888887765


Q ss_pred             -CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccC
Q 013522          238 -FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFK  276 (441)
Q Consensus       238 -~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~  276 (441)
                       ...|..+++.+.+||.+||+.||.+|||+.+++++.|+.
T Consensus       304 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          304 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence             455677999999999999999999999999999998864


No 143
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=8.2e-49  Score=384.65  Aligned_cols=256  Identities=28%  Similarity=0.433  Sum_probs=216.3

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEE-cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCC------CcceE
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARN-LQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHK------HIVEL   84 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~-~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp------nIv~l   84 (441)
                      ..+.++.++|++.+.||+|+||+||+|.+ ..+++.||+|++....    ...+.+.+|+.+++.++|+      +|+++
T Consensus         7 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~   82 (339)
T 1z57_A            7 QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLNTTDPNSTFRCVQM   82 (339)
T ss_dssp             STTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHHCTTCTTCBCCE
T ss_pred             ecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC----chhHHHHHHHHHHHHhhhcCCCCceeeEee
Confidence            45677889999999999999999999998 5688999999996432    3456788999999988765      49999


Q ss_pred             EEEEEeCCEEEEEEeccCCCchHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC--------
Q 013522           85 HEVMASKSKIYFAMDLVKGGELFNKIAKG---RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE--------  153 (441)
Q Consensus        85 ~~~~~~~~~~~lv~E~~~gg~L~~~i~~~---~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~--------  153 (441)
                      ++++.+.+..|+||||+ +++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.        
T Consensus        83 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~  161 (339)
T 1z57_A           83 LEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN  161 (339)
T ss_dssp             EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred             ecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccC
Confidence            99999999999999999 88999999753   5899999999999999999999999999999999999987        


Q ss_pred             -----------CCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCC
Q 013522          154 -----------DGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQ  222 (441)
Q Consensus       154 -----------~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~  222 (441)
                                 ++.+||+|||++.....     .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.
T Consensus       162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~pf~  235 (339)
T 1z57_A          162 PKIKRDERTLINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFP  235 (339)
T ss_dssp             ----CEEEEESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHHTTSCC-CTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CccccccccccCCCceEeeCcccccCcc-----ccccccCCccccChHHhhCCCC-CcchhhHHHHHHHHHHHhCCCCCC
Confidence                       66899999999875332     2345679999999999988777 489999999999999999999999


Q ss_pred             CCcHHHHHHHHHcCCCCC--------------------------------------------CCCCCHHHHHHHHHhcCC
Q 013522          223 DDNIVSMYRKIYRGDFKC--------------------------------------------PPWFSSEARRLITKLLDP  258 (441)
Q Consensus       223 ~~~~~~~~~~i~~~~~~~--------------------------------------------~~~~~~~~~~li~~~L~~  258 (441)
                      ..+.......+.....+.                                            +...++++.+||.+||++
T Consensus       236 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  315 (339)
T 1z57_A          236 THDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY  315 (339)
T ss_dssp             CSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred             CCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCc
Confidence            877665444332211111                                            111246788999999999


Q ss_pred             CCCCCCCHHHHhcCcccCcc
Q 013522          259 NPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       259 dP~~R~t~~eil~hpwf~~~  278 (441)
                      ||.+|||+.++++||||+..
T Consensus       316 dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          316 DPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             STTTSCCHHHHTTSGGGGGG
T ss_pred             CcccccCHHHHhcCHHHHHH
Confidence            99999999999999999753


No 144
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.6e-49  Score=400.05  Aligned_cols=259  Identities=26%  Similarity=0.400  Sum_probs=197.6

Q ss_pred             cccCCeEE-eeeecccCceEEEEEEEc--CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe--
Q 013522           16 LLHGKYEL-GRMLGHGTFAKVYLARNL--QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS--   90 (441)
Q Consensus        16 ~~~~~y~i-~~~LG~G~fg~Vy~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--   90 (441)
                      .+.+.|++ +++||+|+||+||+|++.  .+++.||+|++.....     ...+.+|+.+|+.++||||+++++++..  
T Consensus        17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (405)
T 3rgf_A           17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHA   91 (405)
T ss_dssp             CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred             hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence            45677888 568999999999999976  5788999999975533     2467899999999999999999999954  


Q ss_pred             CCEEEEEEeccCCCchHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe----CCCCC
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK----------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL----DEDGN  156 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~----------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl----~~~~~  156 (441)
                      ...+|+||||+.| +|.+.+..          ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.
T Consensus        92 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  170 (405)
T 3rgf_A           92 DRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  170 (405)
T ss_dssp             TTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred             CCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence            7789999999975 78887752          249999999999999999999999999999999999999    67789


Q ss_pred             eEEeecCccccccccc-cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH--------
Q 013522          157 LKVTDFGLSAFSEHLK-QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV--------  227 (441)
Q Consensus       157 vkl~DFGla~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~--------  227 (441)
                      +||+|||+|....... ........+||+.|+|||++.+....+.++|||||||++|+|++|.+||.+.+..        
T Consensus       171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~  250 (405)
T 3rgf_A          171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH  250 (405)
T ss_dssp             EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred             EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence            9999999998654321 1233456789999999999987665679999999999999999999999765431        


Q ss_pred             -HHHHHHHc--CCCCCC------------------------------------CCCCHHHHHHHHHhcCCCCCCCCCHHH
Q 013522          228 -SMYRKIYR--GDFKCP------------------------------------PWFSSEARRLITKLLDPNPNSRIAISK  268 (441)
Q Consensus       228 -~~~~~i~~--~~~~~~------------------------------------~~~~~~~~~li~~~L~~dP~~R~t~~e  268 (441)
                       .....+..  +.+...                                    ...++.+.+||.+||.+||.+|||+.+
T Consensus       251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e  330 (405)
T 3rgf_A          251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ  330 (405)
T ss_dssp             HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence             22222221  111100                                    012678999999999999999999999


Q ss_pred             HhcCcccCccCC
Q 013522          269 IMESSWFKKSAP  280 (441)
Q Consensus       269 il~hpwf~~~~~  280 (441)
                      +|+||||.....
T Consensus       331 ~L~hp~f~~~~~  342 (405)
T 3rgf_A          331 AMQDPYFLEDPL  342 (405)
T ss_dssp             HHTSGGGTSSSC
T ss_pred             HhcChhhccCCC
Confidence            999999987543


No 145
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.7e-48  Score=371.59  Aligned_cols=252  Identities=22%  Similarity=0.370  Sum_probs=221.8

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      ..+-.++|++.+.||+|+||+||+|++. +++.||+|++......    .+.+.+|+.++++++||||+++++++.+.+.
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   79 (269)
T 4hcu_A            5 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP   79 (269)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             EEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCc
Confidence            4556689999999999999999999986 5778999999765432    3578899999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .|+||||++|++|.+++..  +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  159 (269)
T 4hcu_A           80 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  159 (269)
T ss_dssp             EEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred             eEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence            9999999999999999975  56999999999999999999999999999999999999999999999999999754332


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCHHHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSSEAR  249 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~  249 (441)
                      .. .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+..+ ....|..+++.+.
T Consensus       160 ~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
T 4hcu_A          160 QY-TSSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY  237 (269)
T ss_dssp             HH-HSTTSTTCCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHH
T ss_pred             cc-ccccCcccccccCCHHHhcCCCC-CchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHH
Confidence            21 12334557888999999987776 489999999999999999 99999999988888888776 3455667899999


Q ss_pred             HHHHHhcCCCCCCCCCHHHHhcC
Q 013522          250 RLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       250 ~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ++|.+||+.||++|||+.++++|
T Consensus       238 ~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          238 QIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCCcccCcCHHHHHHH
Confidence            99999999999999999999875


No 146
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=1.9e-48  Score=382.41  Aligned_cols=255  Identities=20%  Similarity=0.314  Sum_probs=220.3

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCc---EEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGK---SMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~---~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      ..+..++|++.+.||+|+||+||+|++..+++   .||+|++....  .....+.+.+|+.+++.++||||+++++++.+
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  121 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTR  121 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            45677899999999999999999999986655   49999997543  23445788999999999999999999999999


Q ss_pred             CCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                      .+..|+||||+.|++|.+++..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  201 (325)
T 3kul_A          122 GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL  201 (325)
T ss_dssp             GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence            9999999999999999999964  57999999999999999999999999999999999999999999999999999865


Q ss_pred             cccccCC-cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCC
Q 013522          169 EHLKQDG-LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFS  245 (441)
Q Consensus       169 ~~~~~~~-~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~  245 (441)
                      ....... ......+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..+ ..+.|..++
T Consensus       202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (325)
T 3kul_A          202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTF-SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCP  280 (325)
T ss_dssp             C----CCEECC---CCGGGSCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             ccCccceeeccCCCCcccccCHhHhcCCCC-CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcC
Confidence            4322211 1223346788999999987766 489999999999999999 99999999888888888776 455677899


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      +.+.+||.+||..||.+|||+.++++
T Consensus       281 ~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          281 HALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999999975


No 147
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=2.1e-48  Score=385.98  Aligned_cols=255  Identities=26%  Similarity=0.425  Sum_probs=215.1

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE--
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK--   93 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~--   93 (441)
                      .+.++|.+.+.||+|+||+||+|++..+|+.||+|++..... .....+.+.+|+.+++.++||||+++++++...+.  
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   99 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR   99 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccc
Confidence            356899999999999999999999999999999999976432 33456788999999999999999999999977654  


Q ss_pred             ----EEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           94 ----IYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        94 ----~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                          .|+||||+. ++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       100 ~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          100 NFYDFYLVMPFMQ-TDLQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             GCCCCEEEEECCS-EEGGGTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             cceeEEEEecccc-CCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence                599999997 588887754 49999999999999999999999999999999999999999999999999987543


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC-------------
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG-------------  236 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~-------------  236 (441)
                      .     .....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+.+.             
T Consensus       178 ~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  252 (353)
T 3coi_A          178 A-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN  252 (353)
T ss_dssp             -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred             C-----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence            2     2345679999999999987445568999999999999999999999988776655544321             


Q ss_pred             ------------------CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          237 ------------------DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       237 ------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                                        ....++.+++++.+||.+||..||++|||+.++++||||+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence                              011234578999999999999999999999999999999754


No 148
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=7e-49  Score=387.26  Aligned_cols=263  Identities=33%  Similarity=0.567  Sum_probs=188.7

Q ss_pred             CCCCCCCCCCCccccCCeEEee-eecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcc
Q 013522            4 SNSNGGGDDRPTLLHGKYELGR-MLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIV   82 (441)
Q Consensus         4 ~~~~~~~~~~~~~~~~~y~i~~-~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv   82 (441)
                      +....++......+.++|++.+ .||+|+||+||+|++..+|+.||+|++....       ....+....++.++||||+
T Consensus        13 ~~~~~~p~~~~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~   85 (336)
T 3fhr_A           13 EVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIV   85 (336)
T ss_dssp             -------CCBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBC
T ss_pred             cccccCCCCCCccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChH
Confidence            3444556666677899999965 6999999999999999999999999986532       1222333346778999999


Q ss_pred             eEEEEEEe----CCEEEEEEeccCCCchHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC-
Q 013522           83 ELHEVMAS----KSKIYFAMDLVKGGELFNKIAKG---RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED-  154 (441)
Q Consensus        83 ~l~~~~~~----~~~~~lv~E~~~gg~L~~~i~~~---~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~-  154 (441)
                      ++++++..    ...+|+||||+.||+|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.+ 
T Consensus        86 ~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~  165 (336)
T 3fhr_A           86 CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE  165 (336)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred             HHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecC
Confidence            99999976    55689999999999999999762   59999999999999999999999999999999999999864 


Q ss_pred             --CCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHH---
Q 013522          155 --GNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSM---  229 (441)
Q Consensus       155 --~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~---  229 (441)
                        +.+||+|||++....    .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+....   
T Consensus       166 ~~~~~kl~Dfg~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  240 (336)
T 3fhr_A          166 KDAVLKLTDFGFAKETT----QNALQTPCYTPYYVAPEVLGPEKY-DKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG  240 (336)
T ss_dssp             TTCCEEECCCTTCEEC--------------------------CHH-HHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             CCceEEEeccccceecc----ccccccCCCCcCccChhhhCCCCC-CchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh
Confidence              459999999987543    223456789999999999976666 4889999999999999999999977654433   


Q ss_pred             -HHHHHcCCCCCC----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          230 -YRKIYRGDFKCP----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       230 -~~~i~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                       ...+..+....|    ..+++++.+||.+||..||.+|||+.++++||||+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          241 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             ----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             HHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence             222333333332    3589999999999999999999999999999999764


No 149
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=4.4e-49  Score=385.85  Aligned_cols=256  Identities=31%  Similarity=0.567  Sum_probs=223.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccch---hhHHHHHHHHHHHHhCC--CCCcceEEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKV---GMMEQIKREISVMKMVK--HKHIVELHEVM   88 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~--hpnIv~l~~~~   88 (441)
                      ...+.++|++++.||+|+||+||+|++..+++.||+|++........   .....+.+|+.+++.++  ||||+++++++
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~  117 (320)
T 3a99_A           38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF  117 (320)
T ss_dssp             --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence            45688999999999999999999999999999999999976543221   11245668999999996  59999999999


Q ss_pred             EeCCEEEEEEeccCC-CchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC-CCCCeEEeecCcc
Q 013522           89 ASKSKIYFAMDLVKG-GELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD-EDGNLKVTDFGLS  165 (441)
Q Consensus        89 ~~~~~~~lv~E~~~g-g~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~-~~~~vkl~DFGla  165 (441)
                      .+.+..++||||+.+ ++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus       118 ~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~  197 (320)
T 3a99_A          118 ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG  197 (320)
T ss_dssp             ECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             ecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence            999999999999986 899999975 7899999999999999999999999999999999999999 7789999999998


Q ss_pred             ccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCC
Q 013522          166 AFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFS  245 (441)
Q Consensus       166 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  245 (441)
                      .....    .......||+.|+|||++.+..+.+.++|||||||++|+|++|..||...+      .+..+....+..++
T Consensus       198 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~  267 (320)
T 3a99_A          198 ALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVS  267 (320)
T ss_dssp             EECCS----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCSSCCC
T ss_pred             ccccc----ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccccccCC
Confidence            75432    234456799999999999888776788999999999999999999997643      34456667788899


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      +++.+||.+||+.||.+|||+.++++||||+...
T Consensus       268 ~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          268 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence            9999999999999999999999999999998654


No 150
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=1e-48  Score=389.10  Aligned_cols=261  Identities=21%  Similarity=0.360  Sum_probs=211.0

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeeccccc--------chhhHHHHHHHHHHHHhCCCCCcceEEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVI--------KVGMMEQIKREISVMKMVKHKHIVELHE   86 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--------~~~~~~~~~~Ei~il~~l~hpnIv~l~~   86 (441)
                      ..+.++|++++.||+|+||+||+|.+. +|+.||+|++......        .....+.+.+|+.+++.++||||+++++
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   96 (362)
T 3pg1_A           18 HAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD   96 (362)
T ss_dssp             HHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred             HHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence            356789999999999999999999985 4999999999654321        2223578999999999999999999999


Q ss_pred             EEEe-----CCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEE
Q 013522           87 VMAS-----KSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKV  159 (441)
Q Consensus        87 ~~~~-----~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl  159 (441)
                      ++..     ...+|+||||+. |+|.+.+..  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  175 (362)
T 3pg1_A           97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI  175 (362)
T ss_dssp             EEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             eEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEE
Confidence            9844     347899999997 588888875  46999999999999999999999999999999999999999999999


Q ss_pred             eecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC---
Q 013522          160 TDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG---  236 (441)
Q Consensus       160 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~---  236 (441)
                      +|||++.....   .......+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+...   
T Consensus       176 ~Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  252 (362)
T 3pg1_A          176 CDFNLAREDTA---DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT  252 (362)
T ss_dssp             CCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             EecCccccccc---ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence            99999874332   233445679999999999987555569999999999999999999999998876666555321   


Q ss_pred             ---------------------CCC--------CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          237 ---------------------DFK--------CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       237 ---------------------~~~--------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                                           ...        .++.+++.+.+||.+||++||.+|||+.++++||||+....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  325 (362)
T 3pg1_A          253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFD  325 (362)
T ss_dssp             CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccC
Confidence                                 000        12346889999999999999999999999999999987643


No 151
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.6e-48  Score=376.61  Aligned_cols=255  Identities=28%  Similarity=0.499  Sum_probs=210.4

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe------
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS------   90 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~------   90 (441)
                      +.++|++++.||+|+||+||+|++..+|+.||+|++...    ....+.+.+|+.+++.++||||+++++++.+      
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK   79 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence            567899999999999999999999999999999999643    2345788999999999999999999998865      


Q ss_pred             -------CCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEee
Q 013522           91 -------KSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTD  161 (441)
Q Consensus        91 -------~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~D  161 (441)
                             .+..|+||||+.|++|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~d  159 (303)
T 1zy4_A           80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD  159 (303)
T ss_dssp             ------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred             hhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEee
Confidence                   4678999999999999999975  3578899999999999999999999999999999999999999999999


Q ss_pred             cCccccccccc------------cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCC-CcHHH
Q 013522          162 FGLSAFSEHLK------------QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQD-DNIVS  228 (441)
Q Consensus       162 FGla~~~~~~~------------~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~-~~~~~  228 (441)
                      ||++.......            ........+||+.|+|||++.+.+..+.++|||||||++|+|++   ||.. .+...
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~  236 (303)
T 1zy4_A          160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN  236 (303)
T ss_dssp             CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred             CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence            99987543211            11233456799999999999876555689999999999999998   5543 34445


Q ss_pred             HHHHHHcCCCCCCC----CCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          229 MYRKIYRGDFKCPP----WFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       229 ~~~~i~~~~~~~~~----~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      ....+......+|+    ..++.+.+||.+||+.||.+|||+.++++||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          237 ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             HHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred             HHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence            66666666555544    456779999999999999999999999999999754


No 152
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=3.7e-48  Score=373.46  Aligned_cols=254  Identities=28%  Similarity=0.479  Sum_probs=211.4

Q ss_pred             eEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEEEec
Q 013522           21 YELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDL  100 (441)
Q Consensus        21 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv~E~  100 (441)
                      |.....||+|+||+||+|.+..+++.||+|++.....   ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch---HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence            3334499999999999999999999999999976532   3456789999999999999999999999999999999999


Q ss_pred             cCCCchHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC-CCCeEEeecCccccccccccCC
Q 013522          101 VKGGELFNKIAKG----RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE-DGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus       101 ~~gg~L~~~i~~~----~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~-~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      ++|++|.+++...    .+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||+|||++......  ..
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~--~~  178 (295)
T 2clq_A          101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI--NP  178 (295)
T ss_dssp             CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred             CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCC--CC
Confidence            9999999999752    4678999999999999999999999999999999999987 899999999998754322  22


Q ss_pred             cccccccCCCccchhhhhccC-CCCCcccHHHHHHHHHHHhhCCCCCCCCcHH--HHHH-HHHcCCCCCCCCCCHHHHHH
Q 013522          176 LLHTTCGTPAYVAPEVISKKG-YDGAKADIWSCGVILYVLLAGFLPFQDDNIV--SMYR-KIYRGDFKCPPWFSSEARRL  251 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~-~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~--~~~~-~i~~~~~~~~~~~~~~~~~l  251 (441)
                      ......||+.|+|||++.+.. ..+.++|||||||++|+|++|..||......  .... .........|..+++++.+|
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  258 (295)
T 2clq_A          179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF  258 (295)
T ss_dssp             --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHH
T ss_pred             cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHH
Confidence            234567999999999997643 2358999999999999999999999754322  2222 23344556778899999999


Q ss_pred             HHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          252 ITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       252 i~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      |.+||+.||++|||+.++++||||+...
T Consensus       259 i~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          259 ILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             HHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             HHHHccCChhhCCCHHHHhcChhhhhcc
Confidence            9999999999999999999999998654


No 153
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=7.8e-49  Score=393.71  Aligned_cols=252  Identities=26%  Similarity=0.466  Sum_probs=208.7

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC--------CCCcceEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK--------HKHIVELH   85 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--------hpnIv~l~   85 (441)
                      +..+.++|++.+.||+|+||+||+|++..+++.||+|++....    ...+.+.+|+.+++.++        ||||++++
T Consensus        32 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~  107 (397)
T 1wak_A           32 GDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE----HYTETALDEIRLLKSVRNSDPNDPNREMVVQLL  107 (397)
T ss_dssp             TCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEE
T ss_pred             hhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC----cchHHHHHHHHHHHHHhhcCCCCCCcceeeeee
Confidence            4577899999999999999999999999999999999996542    34567889999999985        78899999


Q ss_pred             EEEE----eCCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhc-CcEeccCCCCcEEeCCCC--
Q 013522           86 EVMA----SKSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSR-GVYHRDLKPENLLLDEDG--  155 (441)
Q Consensus        86 ~~~~----~~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~-gi~HrDLkp~NILl~~~~--  155 (441)
                      +++.    +...+|+||||+ +++|.+.+..   +.+++..++.++.||+.||.|||++ ||+||||||+|||++.++  
T Consensus       108 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~  186 (397)
T 1wak_A          108 DDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQY  186 (397)
T ss_dssp             EEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHH
T ss_pred             cceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchh
Confidence            9987    566899999999 5567666653   4699999999999999999999998 999999999999999775  


Q ss_pred             -----------------------------------------------CeEEeecCccccccccccCCcccccccCCCccc
Q 013522          156 -----------------------------------------------NLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVA  188 (441)
Q Consensus       156 -----------------------------------------------~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~A  188 (441)
                                                                     .+||+|||+|.....     .....+||+.|+|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-----~~~~~~gt~~y~a  261 (397)
T 1wak_A          187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-----HFTEDIQTRQYRS  261 (397)
T ss_dssp             HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-----CSCSCCSCGGGCC
T ss_pred             hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-----cCccCCCCCcccC
Confidence                                                           799999999975432     2345679999999


Q ss_pred             hhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCc------HHHHHHHHHc--CC-----------------------
Q 013522          189 PEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDN------IVSMYRKIYR--GD-----------------------  237 (441)
Q Consensus       189 PE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~------~~~~~~~i~~--~~-----------------------  237 (441)
                      ||++.+..+. .++|||||||++|+|++|..||...+      .......+..  +.                       
T Consensus       262 PE~~~~~~~~-~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  340 (397)
T 1wak_A          262 LEVLIGSGYN-TPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLK  340 (397)
T ss_dssp             HHHHHTSCCC-THHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBS
T ss_pred             ChhhcCCCCC-cHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccc
Confidence            9999888774 89999999999999999999997643      1122222111  00                       


Q ss_pred             -----------------CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccC
Q 013522          238 -----------------FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFK  276 (441)
Q Consensus       238 -----------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~  276 (441)
                                       ...+...++.+.+||.+||++||++|||+.++|+||||+
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          341 HITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             SCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             cccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                             011222346788999999999999999999999999996


No 154
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.2e-48  Score=387.67  Aligned_cols=258  Identities=24%  Similarity=0.414  Sum_probs=226.2

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCC-------CcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcce
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQT-------GKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVE   83 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~-------~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~   83 (441)
                      ....+..++|++++.||+|+||+||+|++..+       +..||+|++....  .......+.+|+.+++.+ +||||++
T Consensus        62 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~  139 (382)
T 3tt0_A           62 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIIN  139 (382)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhh
Confidence            34567788999999999999999999997543       3579999997553  234567889999999999 9999999


Q ss_pred             EEEEEEeCCEEEEEEeccCCCchHHHHhcC-----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCC
Q 013522           84 LHEVMASKSKIYFAMDLVKGGELFNKIAKG-----------------RLREDVARVYFQQLISAVDFCHSRGVYHRDLKP  146 (441)
Q Consensus        84 l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~-----------------~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp  146 (441)
                      +++++.+.+..|+||||+.||+|.+++...                 .+++..+..++.||+.||.|||++||+||||||
T Consensus       140 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  219 (382)
T 3tt0_A          140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA  219 (382)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             heeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCc
Confidence            999999999999999999999999999753                 389999999999999999999999999999999


Q ss_pred             CcEEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCc
Q 013522          147 ENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDN  225 (441)
Q Consensus       147 ~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~  225 (441)
                      +|||++.++.+||+|||+|................||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+
T Consensus       220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~ellt~g~~p~~~~~  298 (382)
T 3tt0_A          220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVP  298 (382)
T ss_dssp             GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999999999999999986554333334455668899999999987766 489999999999999999 999999999


Q ss_pred             HHHHHHHHHcC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          226 IVSMYRKIYRG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       226 ~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ...+...+..+ ....|..+++++.+||.+||+.||++|||+.+++++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          299 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            88888888776 345677899999999999999999999999999875


No 155
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=3.7e-48  Score=371.67  Aligned_cols=256  Identities=20%  Similarity=0.339  Sum_probs=221.3

Q ss_pred             CCCCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           10 GDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        10 ~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      +...+.+..++|++++.||+|+||+||+|.+. ++..||+|++......    .+.+.+|+.+++.++||||+++++++.
T Consensus        15 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~   89 (283)
T 3gen_A           15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCT   89 (283)
T ss_dssp             -CCTTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             CCCCccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEe
Confidence            34556777889999999999999999999885 6778999999765432    357889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      +.+..|+||||+.|++|.+++..  +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~  169 (283)
T 3gen_A           90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY  169 (283)
T ss_dssp             SSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred             cCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccc
Confidence            99999999999999999999976  6799999999999999999999999999999999999999999999999999975


Q ss_pred             ccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCC
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFS  245 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~  245 (441)
                      ...... .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+..+. ...|..++
T Consensus       170 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (283)
T 3gen_A          170 VLDDEY-TSSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS  247 (283)
T ss_dssp             BCCHHH-HSTTSTTSCGGGCCHHHHHHCCC-SHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             cccccc-ccccCCccCcccCCHHHhccCCC-CchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCC
Confidence            433221 12234457888999999987776 589999999999999998 999999998888888887764 44566789


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +.+.+||.+||+.||.+|||+.++++|
T Consensus       248 ~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          248 EKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            999999999999999999999999876


No 156
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-48  Score=383.02  Aligned_cols=255  Identities=22%  Similarity=0.331  Sum_probs=223.0

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNL-----QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      ....++|++++.||+|+||+||+|++.     .+++.||+|++....  .....+.+.+|+.+++.++||||+++++++.
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            345678999999999999999999987     455899999997543  2345678999999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc-------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccC
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK-------------------------GRLREDVARVYFQQLISAVDFCHSRGVYHRDL  144 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~-------------------------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDL  144 (441)
                      +.+..|+||||+.||+|.+++..                         +.+++..++.++.||+.||.|||++||+||||
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl  200 (343)
T 1luf_A          121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL  200 (343)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99999999999999999999975                         56899999999999999999999999999999


Q ss_pred             CCCcEEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCC
Q 013522          145 KPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQD  223 (441)
Q Consensus       145 kp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~  223 (441)
                      ||+|||++.++.+||+|||++................||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+
T Consensus       201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY-TTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCc-CcccccHHHHHHHHHHHhcCCCcCCC
Confidence            99999999999999999999976543332233445678999999999988776 489999999999999999 9999999


Q ss_pred             CcHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          224 DNIVSMYRKIYRGDF-KCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       224 ~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      .+.......+..+.. ..|..+++++.+||.+||+.||.+|||+.+++++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          280 MAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             SCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            988888888877754 5677899999999999999999999999999864


No 157
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=6e-49  Score=382.74  Aligned_cols=257  Identities=30%  Similarity=0.596  Sum_probs=212.6

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccch---hhHHHHHHHHHHHHhC----CCCCcceEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKV---GMMEQIKREISVMKMV----KHKHIVELHE   86 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~~Ei~il~~l----~hpnIv~l~~   86 (441)
                      ...+.++|++++.||+|+||+||+|++..+++.||+|++........   .....+.+|+.+++.+    +||||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            46788999999999999999999999999999999999976543221   1223456799999988    8999999999


Q ss_pred             EEEeCCEEEEEEec-cCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC-CCCCeEEeecC
Q 013522           87 VMASKSKIYFAMDL-VKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD-EDGNLKVTDFG  163 (441)
Q Consensus        87 ~~~~~~~~~lv~E~-~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~-~~~~vkl~DFG  163 (441)
                      ++.+.+..++|||| +.+++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg  185 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG  185 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence            99999999999999 789999999976 6799999999999999999999999999999999999999 78999999999


Q ss_pred             ccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCC
Q 013522          164 LSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPW  243 (441)
Q Consensus       164 la~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~  243 (441)
                      ++.....    .......||+.|+|||++.+..+.+.++|||||||++|+|++|+.||....      .+......++..
T Consensus       186 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~  255 (312)
T 2iwi_A          186 SGALLHD----EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFPAH  255 (312)
T ss_dssp             SCEECCS----SCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCCCTT
T ss_pred             hhhhccc----CcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCCccc
Confidence            9875442    234556799999999999887776668999999999999999999997643      344566778888


Q ss_pred             CCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccCC
Q 013522          244 FSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAP  280 (441)
Q Consensus       244 ~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~~  280 (441)
                      +++.+.+||.+||+.||++|||+.++++||||+....
T Consensus       256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          256 VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence            9999999999999999999999999999999986543


No 158
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=4.4e-49  Score=393.74  Aligned_cols=253  Identities=17%  Similarity=0.189  Sum_probs=195.3

Q ss_pred             CCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC--CCCCcceEE-------EEEE
Q 013522           19 GKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV--KHKHIVELH-------EVMA   89 (441)
Q Consensus        19 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l--~hpnIv~l~-------~~~~   89 (441)
                      ..|++++.||+|+||+||+|++..+|+.||+|++...........+.+++|+.+++.|  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            3599999999999999999999999999999999887654445567788886555544  699988755       5554


Q ss_pred             eC-----------------CEEEEEEeccCCCchHHHHhc--CCCCHHHH------HHHHHHHHHHHHHHhhcCcEeccC
Q 013522           90 SK-----------------SKIYFAMDLVKGGELFNKIAK--GRLREDVA------RVYFQQLISAVDFCHSRGVYHRDL  144 (441)
Q Consensus        90 ~~-----------------~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~------~~~~~qll~aL~ylH~~gi~HrDL  144 (441)
                      ..                 ..+|+||||+. |+|.+++..  ..+++...      ..++.||+.||+|||++||+||||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi  220 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF  220 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence            43                 34899999998 799999975  33444444      566799999999999999999999


Q ss_pred             CCCcEEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhc--cCCCCCcccHHHHHHHHHHHhhCCCCCC
Q 013522          145 KPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISK--KGYDGAKADIWSCGVILYVLLAGFLPFQ  222 (441)
Q Consensus       145 kp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~--~~~~~~~~DiwSlGvil~~ll~G~~Pf~  222 (441)
                      ||+|||++.++.+||+|||+|.....     ......||+.|+|||++.+  ..+ +.++|||||||++|+|++|..||.
T Consensus       221 kp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~-~~~~DiwSlG~il~elltg~~Pf~  294 (371)
T 3q60_A          221 TPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATF-THALNAWQLGLSIYRVWCLFLPFG  294 (371)
T ss_dssp             SGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEEC-CHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred             CHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCc-CccccHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999975432     2224567799999999976  455 589999999999999999999998


Q ss_pred             CCcHHH--HHHH-----HHcCCCCC--CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          223 DDNIVS--MYRK-----IYRGDFKC--PPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       223 ~~~~~~--~~~~-----i~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      +.....  .+..     .....+.+  ++.+++.+.+||.+||++||++|||+.++++||||++.
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence            764321  0000     01112222  34689999999999999999999999999999999753


No 159
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=4.1e-48  Score=381.58  Aligned_cols=259  Identities=22%  Similarity=0.359  Sum_probs=214.0

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISV-MKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~hpnIv~l~~~~~~~~~   93 (441)
                      .+..++|++++.||+|+||+||+|++..+|+.||||++......  .....+..|+.+ ++.++||||+++++++.+.+.
T Consensus        47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~  124 (340)
T 3an0_A           47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD  124 (340)
T ss_dssp             CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC--HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSC
T ss_pred             EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc--HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCc
Confidence            56678999999999999999999999999999999999765322  233455556665 788899999999999999999


Q ss_pred             EEEEEeccCCCchHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhc-CcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           94 IYFAMDLVKGGELFNKIA-----KGRLREDVARVYFQQLISAVDFCHSR-GVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~-----~~~l~~~~~~~~~~qll~aL~ylH~~-gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      .|+||||+.| +|.+++.     .+.+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++..
T Consensus       125 ~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  203 (340)
T 3an0_A          125 VWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGY  203 (340)
T ss_dssp             EEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred             EEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence            9999999976 8888775     26799999999999999999999997 999999999999999999999999999875


Q ss_pred             ccccccCCcccccccCCCccchhhhhcc---CCCCCcccHHHHHHHHHHHhhCCCCCCCC-cHHHHHHHHHc-CCCCCC-
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVISKK---GYDGAKADIWSCGVILYVLLAGFLPFQDD-NIVSMYRKIYR-GDFKCP-  241 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~~~---~~~~~~~DiwSlGvil~~ll~G~~Pf~~~-~~~~~~~~i~~-~~~~~~-  241 (441)
                      ....   ......+||+.|+|||++.+.   ...+.++|||||||++|+|++|..||... ........+.. .....+ 
T Consensus       204 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  280 (340)
T 3an0_A          204 LVDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA  280 (340)
T ss_dssp             HSCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCG
T ss_pred             cccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCc
Confidence            4321   122345799999999997432   23358999999999999999999999863 33333333333 333333 


Q ss_pred             CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          242 PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       242 ~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ..+++++.+||.+||..||++|||+.++++||||....
T Consensus       281 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~  318 (340)
T 3an0_A          281 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE  318 (340)
T ss_dssp             GGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHT
T ss_pred             ccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccc
Confidence            34899999999999999999999999999999997543


No 160
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.3e-47  Score=375.19  Aligned_cols=259  Identities=28%  Similarity=0.435  Sum_probs=217.2

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEc-CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC---CCCCcceEEEEEE-
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNL-QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV---KHKHIVELHEVMA-   89 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~-   89 (441)
                      ....++|++++.||+|+||+||+|++. .+|+.||+|++....... .....+.+|+.+++.+   +||||+++++++. 
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~   85 (326)
T 1blx_A            7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV   85 (326)
T ss_dssp             CCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred             cCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence            345689999999999999999999995 678999999997543221 1223456788777766   8999999999987 


Q ss_pred             ----eCCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeec
Q 013522           90 ----SKSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDF  162 (441)
Q Consensus        90 ----~~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DF  162 (441)
                          .....++||||+. |+|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Df  164 (326)
T 1blx_A           86 SRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF  164 (326)
T ss_dssp             EECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecC
Confidence                5678999999998 599999875   34999999999999999999999999999999999999999999999999


Q ss_pred             CccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--C---
Q 013522          163 GLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--D---  237 (441)
Q Consensus       163 Gla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~---  237 (441)
                      |++......   ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+...  .   
T Consensus       165 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  240 (326)
T 1blx_A          165 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE  240 (326)
T ss_dssp             CSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred             cccccccCC---CCccccccccceeCHHHHhcCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence            998754422   23445679999999999987766 48999999999999999999999998877766665431  0   


Q ss_pred             ----------------------CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          238 ----------------------FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       238 ----------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                                            ..+++.+++.+++||.+||..||.+|||+.++++||||+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence                                  012345789999999999999999999999999999998654


No 161
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=5.5e-48  Score=387.36  Aligned_cols=254  Identities=26%  Similarity=0.420  Sum_probs=214.1

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CC-----CcceEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-HK-----HIVELHEV   87 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hp-----nIv~l~~~   87 (441)
                      +..+.++|++.+.||+|+||+||+|++..+++.||||++....    .....+.+|+.+++.++ |+     +|++++++
T Consensus        49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  124 (382)
T 2vx3_A           49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRH  124 (382)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEE
T ss_pred             CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH----HHHHHHHHHHHHHHHHHhcccccceeEEEeeee
Confidence            4567899999999999999999999999999999999997542    34567888999998885 55     49999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHh--hcCcEeccCCCCcEEeC--CCCCeEEe
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCH--SRGVYHRDLKPENLLLD--EDGNLKVT  160 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH--~~gi~HrDLkp~NILl~--~~~~vkl~  160 (441)
                      +...+..|+||||+.| +|.+++..   +.+++..++.++.||+.||.|||  +.||+||||||+|||++  .++.+||+
T Consensus       125 ~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~  203 (382)
T 2vx3_A          125 FMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIV  203 (382)
T ss_dssp             EEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred             eccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEE
Confidence            9999999999999965 99999875   45899999999999999999999  57999999999999995  47789999


Q ss_pred             ecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCC
Q 013522          161 DFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKC  240 (441)
Q Consensus       161 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~  240 (441)
                      |||+|.....     .....+||+.|+|||++.+..++ .++|||||||++|+|++|.+||.+.+.......+.......
T Consensus       204 DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~  277 (382)
T 2vx3_A          204 DFGSSCQLGQ-----RIYQYIQSRFYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP  277 (382)
T ss_dssp             CCTTCEETTC-----CCCSSCSCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSC
T ss_pred             eccCceeccc-----ccccccCCccccChHHHcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            9999975432     23467899999999999887774 89999999999999999999999988777666654311000


Q ss_pred             ------------------------------------CCC----------------------------CCHHHHHHHHHhc
Q 013522          241 ------------------------------------PPW----------------------------FSSEARRLITKLL  256 (441)
Q Consensus       241 ------------------------------------~~~----------------------------~~~~~~~li~~~L  256 (441)
                                                          ++.                            .++++++||.+||
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL  357 (382)
T 2vx3_A          278 PAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRML  357 (382)
T ss_dssp             CHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHT
T ss_pred             CHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhc
Confidence                                                000                            0137899999999


Q ss_pred             CCCCCCCCCHHHHhcCcccCcc
Q 013522          257 DPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       257 ~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      ++||++|||+.++|+||||+..
T Consensus       358 ~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          358 DYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             CSCTTTSCCHHHHTTSGGGCC-
T ss_pred             CCChhhCCCHHHHhcCcccccC
Confidence            9999999999999999999864


No 162
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.4e-48  Score=389.44  Aligned_cols=256  Identities=25%  Similarity=0.410  Sum_probs=220.6

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      .+.+-.++|++++.||+|+||+||+|++..+++.||+|++....  .......+.+|+.+|+.++||||+++++++.+.+
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  185 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ  185 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC
Confidence            34455678999999999999999999999999999999986542  2234557889999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      .+|+||||++||+|.+++..  ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|.....
T Consensus       186 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          186 PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD  265 (377)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred             CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence            99999999999999999975  4699999999999999999999999999999999999999999999999999875332


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCHHH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSSEA  248 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~  248 (441)
                      ...........+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..+ ..+.|..+++.+
T Consensus       266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  344 (377)
T 3cbl_A          266 GVYAASGGLRQVPVKWTAPEALNYGRY-SSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAV  344 (377)
T ss_dssp             SEEECCSSCCEEEGGGSCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             CceeecCCCCCCCcCcCCHhHhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence            111111122345778999999987766 489999999999999998 99999998887777777665 456778899999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhc
Q 013522          249 RRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+||.+||+.||++|||+.++++
T Consensus       345 ~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          345 FRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCCchhCcCHHHHHH
Confidence            99999999999999999999975


No 163
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.5e-48  Score=387.24  Aligned_cols=255  Identities=24%  Similarity=0.398  Sum_probs=216.0

Q ss_pred             ccccCCeEEeeeecccCceEEEEEE-----EcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLAR-----NLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVM   88 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~-----~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~   88 (441)
                      .+..++|++++.||+|+||.||+|+     +..+++.||+|++....  .....+.+.+|+.+++.+ +||||+++++++
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~   95 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGAC   95 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeee
Confidence            4567899999999999999999999     45677899999997543  223456789999999999 799999999999


Q ss_pred             EeCC-EEEEEEeccCCCchHHHHhcCC-----------------------------------------------------
Q 013522           89 ASKS-KIYFAMDLVKGGELFNKIAKGR-----------------------------------------------------  114 (441)
Q Consensus        89 ~~~~-~~~lv~E~~~gg~L~~~i~~~~-----------------------------------------------------  114 (441)
                      .+.+ .+++||||+.||+|.+++....                                                     
T Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (359)
T 3vhe_A           96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD  175 (359)
T ss_dssp             CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred             ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence            8754 4899999999999999997522                                                     


Q ss_pred             --------------CCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCccccc
Q 013522          115 --------------LREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTT  180 (441)
Q Consensus       115 --------------l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~  180 (441)
                                    +++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...............
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  255 (359)
T 3vhe_A          176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA  255 (359)
T ss_dssp             --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred             hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence                          889999999999999999999999999999999999999999999999999755433222234456


Q ss_pred             ccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHH-HHHHHHHcC-CCCCCCCCCHHHHHHHHHhcC
Q 013522          181 CGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIV-SMYRKIYRG-DFKCPPWFSSEARRLITKLLD  257 (441)
Q Consensus       181 ~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~-~~~~~i~~~-~~~~~~~~~~~~~~li~~~L~  257 (441)
                      .||+.|+|||++.+..+. .++|||||||++|+|++ |..||.+.+.. .....+..+ ....|..+++++.++|.+||+
T Consensus       256 ~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  334 (359)
T 3vhe_A          256 RLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH  334 (359)
T ss_dssp             EECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCceeEChhhhcCCCCC-chhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            789999999999887764 89999999999999998 99999886543 333344433 456678899999999999999


Q ss_pred             CCCCCCCCHHHHhcC
Q 013522          258 PNPNSRIAISKIMES  272 (441)
Q Consensus       258 ~dP~~R~t~~eil~h  272 (441)
                      .||.+|||+.++++|
T Consensus       335 ~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          335 GEPSQRPTFSELVEH  349 (359)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhhCCCHHHHHHH
Confidence            999999999999876


No 164
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=4.1e-48  Score=376.48  Aligned_cols=257  Identities=22%  Similarity=0.341  Sum_probs=222.4

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNL-----QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEV   87 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~   87 (441)
                      ......++|++++.||+|+||+||+|.+.     .+++.||+|++....  .....+.+.+|+.+++.++||||++++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   94 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGA   94 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEE
Confidence            34566789999999999999999999983     456899999997543  23456788999999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHhcC-------------------------CCCHHHHHHHHHHHHHHHHHHhhcCcEec
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIAKG-------------------------RLREDVARVYFQQLISAVDFCHSRGVYHR  142 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~~~-------------------------~l~~~~~~~~~~qll~aL~ylH~~gi~Hr  142 (441)
                      +.+.+..|+||||+.|++|.+++...                         .+++..+..++.||+.||.|||++||+||
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~  174 (314)
T 2ivs_A           95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR  174 (314)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             EecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence            99999999999999999999999752                         28899999999999999999999999999


Q ss_pred             cCCCCcEEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCC
Q 013522          143 DLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPF  221 (441)
Q Consensus       143 DLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf  221 (441)
                      ||||+|||++.++.+||+|||++................+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||
T Consensus       175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~  253 (314)
T 2ivs_A          175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY-TTQSDVWSFGVLLWEIVTLGGNPY  253 (314)
T ss_dssp             CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCc-CchhhHHHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999999875543222222334567889999999987766 489999999999999999 99999


Q ss_pred             CCCcHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          222 QDDNIVSMYRKIYRGD-FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       222 ~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      .+.+...+...+..+. ...|..+++++.+||.+||+.||.+|||+.+++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          254 PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             TTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9988877777776654 45677899999999999999999999999999865


No 165
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=8.4e-48  Score=380.16  Aligned_cols=255  Identities=27%  Similarity=0.417  Sum_probs=213.8

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCC-cEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCC------cceEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTG-KSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKH------IVELH   85 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~-~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn------Iv~l~   85 (441)
                      .+..+.++|++.+.||+|+||+||+|.+..++ +.||+|++....    ...+.+.+|+.+++.++|++      ++.++
T Consensus        13 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~   88 (355)
T 2eu9_A           13 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG----KYREAARLEINVLKKIKEKDKENKFLCVLMS   88 (355)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred             cCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc----cchhHHHHHHHHHHHHhhcCCCCceeEEEee
Confidence            45678899999999999999999999998777 689999996532    34567889999999997766      99999


Q ss_pred             EEEEeCCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe-----------
Q 013522           86 EVMASKSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL-----------  151 (441)
Q Consensus        86 ~~~~~~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl-----------  151 (441)
                      +++...+..|+||||+ +++|.+.+..   ..+++..++.++.||+.||.|||++||+||||||+|||+           
T Consensus        89 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~  167 (355)
T 2eu9_A           89 DWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE  167 (355)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECC
T ss_pred             eeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccc
Confidence            9999999999999999 5677777754   369999999999999999999999999999999999999           


Q ss_pred             --------CCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCC
Q 013522          152 --------DEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQD  223 (441)
Q Consensus       152 --------~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~  223 (441)
                              +.++.+||+|||++.....     .....+||+.|+|||++.+..+. .++|||||||++|+|++|..||..
T Consensus       168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~il~el~~g~~pf~~  241 (355)
T 2eu9_A          168 HKSCEEKSVKNTSIRVADFGSATFDHE-----HHTTIVATRHYRPPEVILELGWA-QPCDVWSIGCILFEYYRGFTLFQT  241 (355)
T ss_dssp             C-CCCEEEESCCCEEECCCTTCEETTS-----CCCSSCSCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccCCCcEEEeecCccccccc-----cccCCcCCCcccCCeeeecCCCC-CccchHHHHHHHHHHHhCCCCCCC
Confidence                    5678999999999975332     23456799999999999887774 899999999999999999999998


Q ss_pred             CcHHHHHHHHHcCCCCCC--------------------------------------------CCCCHHHHHHHHHhcCCC
Q 013522          224 DNIVSMYRKIYRGDFKCP--------------------------------------------PWFSSEARRLITKLLDPN  259 (441)
Q Consensus       224 ~~~~~~~~~i~~~~~~~~--------------------------------------------~~~~~~~~~li~~~L~~d  259 (441)
                      .+.......+.....+.|                                            ...++++.+||.+||+.|
T Consensus       242 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  321 (355)
T 2eu9_A          242 HENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD  321 (355)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred             CCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence            776654443322111111                                            112357889999999999


Q ss_pred             CCCCCCHHHHhcCcccCcc
Q 013522          260 PNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       260 P~~R~t~~eil~hpwf~~~  278 (441)
                      |++|||+.++++||||+..
T Consensus       322 P~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          322 PAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             TTTSCCHHHHTTSGGGGGC
T ss_pred             hhhCcCHHHHhcChhhcCC
Confidence            9999999999999999864


No 166
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=9.4e-48  Score=374.48  Aligned_cols=259  Identities=21%  Similarity=0.358  Sum_probs=209.5

Q ss_pred             CCCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           11 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        11 ~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      .....+..++|++.+.||+|+||+||+|++.   ..+|+|++..... .....+.+.+|+.+++.++||||+++++++. 
T Consensus        28 ~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-  102 (307)
T 3lb7_A           28 SYYWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-  102 (307)
T ss_dssp             -CCCBCCTTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-
T ss_pred             CceEEecccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-
Confidence            3445677889999999999999999999863   3589998865432 3345678999999999999999999999875 


Q ss_pred             CCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                      .+..++||||+.|++|.+++..  +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|...
T Consensus       103 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~  182 (307)
T 3lb7_A          103 KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK  182 (307)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred             cCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence            4568999999999999999963  67999999999999999999999999999999999999999999999999999865


Q ss_pred             cccccCCcccccccCCCccchhhhh---ccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHH-HHcCCC-----C
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVIS---KKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRK-IYRGDF-----K  239 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~---~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~-i~~~~~-----~  239 (441)
                      ............+||+.|+|||++.   +..+ +.++|||||||++|+|++|..||...+....... +..+..     .
T Consensus       183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  261 (307)
T 3lb7_A          183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF-SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSK  261 (307)
T ss_dssp             -----------CCCCTTSCCHHHHHCCSSCCC-CHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTT
T ss_pred             ccccccccccCCCCCcceECcceeeccCCCCC-CchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhh
Confidence            5433444455678999999999996   3334 5799999999999999999999987655443333 333221     1


Q ss_pred             CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCccc
Q 013522          240 CPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWF  275 (441)
Q Consensus       240 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf  275 (441)
                      .+..+++.+.+||.+||+.||++|||+.+++++.+.
T Consensus       262 ~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~  297 (307)
T 3lb7_A          262 LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL  297 (307)
T ss_dssp             SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred             hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence            234678999999999999999999999999988664


No 167
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.2e-47  Score=365.13  Aligned_cols=251  Identities=22%  Similarity=0.334  Sum_probs=219.0

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      .+..++|++.+.||+|+||+||+|.+. ++..||+|++......    .+.+.+|+.+++.++||||+++++++.+....
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   78 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI   78 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCce
Confidence            456689999999999999999999875 6778999999765432    35788999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      |+||||++|++|.+++..  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             EEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            999999999999999975  459999999999999999999999999999999999999999999999999987543321


Q ss_pred             cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCCC-CCCCCCCHHHHH
Q 013522          173 QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGDF-KCPPWFSSEARR  250 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~  250 (441)
                      . .......||+.|+|||++.+..+. .++|||||||++|+|++ |..||...+.......+..+.. ..|..+++.+.+
T Consensus       159 ~-~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (268)
T 3sxs_A          159 Y-VSSVGTKFPVKWSAPEVFHYFKYS-SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQ  236 (268)
T ss_dssp             E-EECCSCCCCGGGCCHHHHHHSEEE-TTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHH
T ss_pred             h-hcccCCCcCcccCCHHHHhccCCc-hhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHH
Confidence            1 112334567789999999877664 88999999999999999 9999999888888888777654 446678999999


Q ss_pred             HHHHhcCCCCCCCCCHHHHhcC
Q 013522          251 LITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       251 li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +|.+||+.||.+|||+.+++++
T Consensus       237 li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          237 IMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999876


No 168
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1.6e-47  Score=364.74  Aligned_cols=250  Identities=27%  Similarity=0.486  Sum_probs=207.6

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccc-hhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIK-VGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI   94 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~   94 (441)
                      +-.++|++.+.||+|+||+||+|.+  +++.||+|++....... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL   81 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred             cchhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence            3457899999999999999999998  58999999987653322 23357789999999999999999999999999999


Q ss_pred             EEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---cEeccCCCCcEEeCC--------CCCeEEeecC
Q 013522           95 YFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRG---VYHRDLKPENLLLDE--------DGNLKVTDFG  163 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~g---i~HrDLkp~NILl~~--------~~~vkl~DFG  163 (441)
                      |+||||+.|++|.+++..+++++..+..++.|++.||.|||++|   |+||||||+|||++.        ++.+||+|||
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           82 CLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             EEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             EEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            99999999999999998888999999999999999999999999   999999999999986        6789999999


Q ss_pred             ccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCC--CCCC
Q 013522          164 LSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGD--FKCP  241 (441)
Q Consensus       164 la~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~--~~~~  241 (441)
                      ++......    ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+....  .+.|
T Consensus       162 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  236 (271)
T 3dtc_A          162 LAREWHRT----TKMSAAGAYAWMAPEVIRASMF-SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP  236 (271)
T ss_dssp             C-----------------CCGGGSCHHHHHHCCC-SHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCC
T ss_pred             cccccccc----cccCCCCccceeCHHHhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCC
Confidence            98754332    2235579999999999987766 589999999999999999999999988777776666554  3556


Q ss_pred             CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          242 PWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       242 ~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ..+++.+.++|.+||+.||.+|||+.+++++
T Consensus       237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            7789999999999999999999999999874


No 169
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.7e-47  Score=373.90  Aligned_cols=257  Identities=21%  Similarity=0.290  Sum_probs=224.2

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNL-----QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEV   87 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~   87 (441)
                      ...+..++|++.+.||+|+||+||+|++.     .+++.||+|++....  .......+.+|+.+++.++||||++++++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   96 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGV   96 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence            34677889999999999999999999886     467889999997543  22345678899999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIAK-----------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN  156 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~~-----------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~  156 (441)
                      +.+.+..|+||||+.||+|.+++..           ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus        97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~  176 (322)
T 1p4o_A           97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT  176 (322)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred             EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCe
Confidence            9999999999999999999999864           35689999999999999999999999999999999999999999


Q ss_pred             eEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHc
Q 013522          157 LKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYR  235 (441)
Q Consensus       157 vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~  235 (441)
                      +||+|||++................||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  255 (322)
T 1p4o_A          177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF-TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME  255 (322)
T ss_dssp             EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT
T ss_pred             EEECcCccccccccccccccccCCCCCCCccChhhhccCCC-CchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc
Confidence            99999999976543322223344567899999999987766 489999999999999999 8999999988888888777


Q ss_pred             CCC-CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          236 GDF-KCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       236 ~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +.. ..+..+++.+.+||.+||+.||.+|||+.+++++
T Consensus       256 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          256 GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            654 4577899999999999999999999999999886


No 170
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=7.2e-48  Score=374.96  Aligned_cols=250  Identities=25%  Similarity=0.406  Sum_probs=211.6

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++++.||+|+||+||+|.+..+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus         7 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   83 (310)
T 3s95_A            7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN   83 (310)
T ss_dssp             ECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             eChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeE
Confidence            3468999999999999999999999999999999988543   2345678999999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc
Q 013522           96 FAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ  173 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~  173 (441)
                      +||||+.|++|.+++..  +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT  163 (310)
T ss_dssp             EEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred             EEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence            99999999999999976  6799999999999999999999999999999999999999999999999999976533221


Q ss_pred             CC------------cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHH-----HHHHHHcC
Q 013522          174 DG------------LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVS-----MYRKIYRG  236 (441)
Q Consensus       174 ~~------------~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~-----~~~~i~~~  236 (441)
                      ..            ...+.+||+.|+|||++.+..+. .++|||||||++|+|++|..||.......     ......  
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--  240 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYD-EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL--  240 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH--
T ss_pred             cccccccccccccccccccCCCcceeCHHHhcCCCCC-cHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc--
Confidence            11            11256799999999999887764 89999999999999999999986532110     001111  


Q ss_pred             CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          237 DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       237 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      ....|+.+++.+.+||.+||+.||++|||+.++++
T Consensus       241 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          241 DRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            12346778899999999999999999999999986


No 171
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3e-47  Score=370.86  Aligned_cols=257  Identities=27%  Similarity=0.418  Sum_probs=210.6

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      ......++|++.+.||+|+||+||+|++..+++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 2h34_A           28 REGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG  107 (309)
T ss_dssp             ------CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred             CCCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC
Confidence            34456789999999999999999999999999999999997665444455678999999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      ..|+||||+.|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             eEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            99999999999999999986 77999999999999999999999999999999999999999999999999998754432


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCC---CCCCCCCHHH
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDF---KCPPWFSSEA  248 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~  248 (441)
                      . ........||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+...+...+.....   ..++.+++.+
T Consensus       188 ~-~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  265 (309)
T 2h34_A          188 K-LTQLGNTVGTLYYMAPERFSESHA-TYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAF  265 (309)
T ss_dssp             ----------CCGGGCCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHH
T ss_pred             c-cccccccCCCcCccCHHHHcCCCC-CchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHH
Confidence            1 122345679999999999987666 4899999999999999999999999887755555544332   2356789999


Q ss_pred             HHHHHHhcCCCCCCCC-CHHHHhc
Q 013522          249 RRLITKLLDPNPNSRI-AISKIME  271 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~-t~~eil~  271 (441)
                      .++|.+||+.||++|| |++++++
T Consensus       266 ~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          266 DAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHHHhccCCHHHHHHhHHHHHH
Confidence            9999999999999999 7888764


No 172
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=4.3e-48  Score=379.55  Aligned_cols=262  Identities=20%  Similarity=0.281  Sum_probs=220.2

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEE-----EcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEE
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLAR-----NLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHE   86 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~-----~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~   86 (441)
                      ....+..++|++++.||+|+||+||+|+     +..+++.||+|++....  .......+.+|+.+++.++||||+++++
T Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~  100 (327)
T 2yfx_A           23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIG  100 (327)
T ss_dssp             GSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEE
Confidence            3445678899999999999999999999     55688899999996432  2344567889999999999999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC---C
Q 013522           87 VMASKSKIYFAMDLVKGGELFNKIAKG--------RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED---G  155 (441)
Q Consensus        87 ~~~~~~~~~lv~E~~~gg~L~~~i~~~--------~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~---~  155 (441)
                      ++.+....|+||||+.|++|.+++...        .+++..+..++.||+.||.|||++||+||||||+|||++.+   .
T Consensus       101 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~  180 (327)
T 2yfx_A          101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR  180 (327)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred             EEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcc
Confidence            999999999999999999999999753        38899999999999999999999999999999999999954   4


Q ss_pred             CeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHH
Q 013522          156 NLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIY  234 (441)
Q Consensus       156 ~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~  234 (441)
                      .+||+|||++................||+.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+.
T Consensus       181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  259 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  259 (327)
T ss_dssp             CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             eEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCC-CchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh
Confidence            599999999875543333333445668999999999987776 489999999999999998 999999988888888777


Q ss_pred             cCC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccC
Q 013522          235 RGD-FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFK  276 (441)
Q Consensus       235 ~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~  276 (441)
                      .+. ...+..+++.+.+||.+||..||.+|||+.+++++.|+.
T Consensus       260 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          260 SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            664 455677999999999999999999999999999998874


No 173
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=3e-47  Score=367.63  Aligned_cols=253  Identities=18%  Similarity=0.278  Sum_probs=214.3

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASK   91 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~   91 (441)
                      ...++.++|++++.||+|+||+||+|++..+|+.||+|++.....     ...+.+|+.+++.+ +||||+++++++.+.
T Consensus         4 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~   78 (298)
T 1csn_A            4 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEG   78 (298)
T ss_dssp             --CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEET
T ss_pred             cCcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCC
Confidence            456788999999999999999999999999999999999865432     23577899999999 899999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC-----eEEeecCc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN-----LKVTDFGL  164 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~-----vkl~DFGl  164 (441)
                      ...|+||||+ |++|.+++..  .++++..+..++.||+.||.|||++||+||||||+|||++.++.     +||+|||+
T Consensus        79 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~  157 (298)
T 1csn_A           79 LHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM  157 (298)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred             ceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence            9999999999 9999999985  46999999999999999999999999999999999999988776     99999999


Q ss_pred             cccccccccC-----CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC---cHHHHHHHHHcC
Q 013522          165 SAFSEHLKQD-----GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD---NIVSMYRKIYRG  236 (441)
Q Consensus       165 a~~~~~~~~~-----~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~---~~~~~~~~i~~~  236 (441)
                      +.........     ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.   +....+..+...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (298)
T 1csn_A          158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQ-SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK  236 (298)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred             ccccccccccccccccCccCCCCCcccCCchhhcCCCC-ChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence            9865432221     12356679999999999987776 58999999999999999999999873   334444444332


Q ss_pred             CC-----CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          237 DF-----KCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       237 ~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ..     ..++.+++++.+||.+||+.||++|||+.++++.
T Consensus       237 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          237 KQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             ccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            21     1234689999999999999999999999999753


No 174
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=6.9e-48  Score=378.71  Aligned_cols=249  Identities=21%  Similarity=0.306  Sum_probs=212.4

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASKSK   93 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~   93 (441)
                      .++.++|++++.||+|+||+||+|++..+|+.||+|++......     +.+.+|+.+++.+ +||||+++++++.+...
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   79 (330)
T 2izr_A            5 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKY   79 (330)
T ss_dssp             CEETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTE
T ss_pred             EEEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCc
Confidence            45678999999999999999999999999999999998755322     3578999999999 99999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC-----eEEeecCccc
Q 013522           94 IYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN-----LKVTDFGLSA  166 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~-----vkl~DFGla~  166 (441)
                      .|+||||+ |++|.+++..  +.+++..+..++.||+.||+|||++||+||||||+|||++.++.     +||+|||++.
T Consensus        80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A           80 NAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             cEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence            99999999 9999999984  67999999999999999999999999999999999999998887     9999999998


Q ss_pred             cccccccCC-----cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCC---CcHHHHHHHHHcCCC
Q 013522          167 FSEHLKQDG-----LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQD---DNIVSMYRKIYRGDF  238 (441)
Q Consensus       167 ~~~~~~~~~-----~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~---~~~~~~~~~i~~~~~  238 (441)
                      .........     .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+   .+....+..+.....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~  237 (330)
T 2izr_A          159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQ-SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR  237 (330)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH
T ss_pred             eeecCCCCccccccccCCcCCCccccChHHHcCCCC-CchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc
Confidence            644322111     2346789999999999988777 5899999999999999999999987   444455555544333


Q ss_pred             CCC-----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          239 KCP-----PWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       239 ~~~-----~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      ..|     ..++ ++.++|.+||..||.+||++.++++
T Consensus       238 ~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          238 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            222     2244 9999999999999999999998875


No 175
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.2e-47  Score=368.14  Aligned_cols=255  Identities=25%  Similarity=0.391  Sum_probs=209.4

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCC---CcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQT---GKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~---~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      ...+..++|++++.||+|+||+||+|.+..+   +..||+|++....  .....+.+.+|+.+++.++||||+++++++.
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   86 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT   86 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEEc
Confidence            3567789999999999999999999998654   4579999986542  2345678899999999999999999999984


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                       .+..|+||||+.+++|.+++..  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        87 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  165 (281)
T 1mp8_A           87 -ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  165 (281)
T ss_dssp             -SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred             -cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccc
Confidence             5678999999999999999975  3699999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCC
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFS  245 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~  245 (441)
                      ..... ........+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..+. .+.|+.++
T Consensus       166 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  243 (281)
T 1mp8_A          166 MEDST-YYKASKGKLPIKWMAPESINFRRF-TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP  243 (281)
T ss_dssp             --------------CCGGGCCHHHHHHCCC-SHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCC
T ss_pred             cCccc-ccccccCCCcccccChhhcccCCC-CCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCC
Confidence            54321 112234457889999999987776 489999999999999996 999999888777777776654 46678899


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +.+.++|.+||..||++|||+.+++++
T Consensus       244 ~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          244 PTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999999999864


No 176
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=9.9e-48  Score=377.40  Aligned_cols=254  Identities=20%  Similarity=0.351  Sum_probs=210.7

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEE----EEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSM----AMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~v----AiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      ....++|++.+.||+|+||+||+|++..+++.+    |+|.+....  .......+.+|+.+++.++||||+++++++.+
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   88 (327)
T 3poz_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred             hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            345678999999999999999999998888765    666664322  22345788999999999999999999999987


Q ss_pred             CCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                      .. .++|+||+.+|+|.+++..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            65 7899999999999999975  56999999999999999999999999999999999999999999999999999865


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCH
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSS  246 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~  246 (441)
                      .............||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+...+...+..+. .+.|+.++.
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI  246 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCH
T ss_pred             cCCcccccccCCCccccccChHHhccCCC-CchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCH
Confidence            54333333344557889999999988777 489999999999999999 999999988777777766653 566778999


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          247 EARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ++.+++.+||+.||.+|||+.+++++
T Consensus       247 ~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          247 DVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999999999876


No 177
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=6.2e-48  Score=378.42  Aligned_cols=254  Identities=19%  Similarity=0.330  Sum_probs=215.7

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcE----EEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKS----MAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~----vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      ....++|++.+.||+|+||+||+|++..+++.    ||+|.+.....  ......+.+|+.+++.++||||+++++++. 
T Consensus         9 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-   85 (325)
T 3kex_A            9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-   85 (325)
T ss_dssp             BCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             hcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-
Confidence            34567999999999999999999999888876    66666643321  122345678999999999999999999986 


Q ss_pred             CCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                      .+..++||||+.+|+|.+++..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence            4568999999999999999975  57999999999999999999999999999999999999999999999999999876


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCH
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSS  246 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~  246 (441)
                      .............||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..+ ....|..+++
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (325)
T 3kex_A          166 PPDDKQLLYSEAKTPIKWMALESIHFGKY-THQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI  244 (325)
T ss_dssp             CCCTTCCC-----CCTTTSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCT
T ss_pred             CcccccccccCCCCcccccChHHhccCCC-ChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcH
Confidence            54443344456678889999999987776 489999999999999999 99999998877777777766 3556777899


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          247 EARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ++.+||.+||..||.+|||+.+++++
T Consensus       245 ~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          245 DVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999999986


No 178
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=9e-48  Score=369.92  Aligned_cols=248  Identities=22%  Similarity=0.301  Sum_probs=213.3

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCC-------cEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTG-------KSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEV   87 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~-------~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~   87 (441)
                      .+..++|++.+.||+|+||+||+|++..++       ..||+|++....   ....+.+.+|+.+++.++||||++++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~   80 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLSHKHLVLNYGV   80 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            456789999999999999999999998877       479999996543   2345789999999999999999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC--------e
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIAKG--RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN--------L  157 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~~~--~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~--------v  157 (441)
                      +.+.+..|+||||+.|++|.+++...  .+++..+..++.||+.||.|||++||+||||||+|||++.++.        +
T Consensus        81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  160 (289)
T 4fvq_A           81 CVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI  160 (289)
T ss_dssp             ECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred             EEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccccee
Confidence            99999999999999999999999863  3999999999999999999999999999999999999998887        9


Q ss_pred             EEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhC-CCCCCCCcHHHHHHHHHcC
Q 013522          158 KVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAG-FLPFQDDNIVSMYRKIYRG  236 (441)
Q Consensus       158 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G-~~Pf~~~~~~~~~~~i~~~  236 (441)
                      ||+|||++.....      .....||+.|+|||++.+....+.++|||||||++|+|++| .+||...+... .......
T Consensus       161 kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~~~~~~  233 (289)
T 4fvq_A          161 KLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KLQFYED  233 (289)
T ss_dssp             EECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHHT
T ss_pred             eeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HHHHhhc
Confidence            9999999864322      23456899999999998744456899999999999999995 55565555444 3344455


Q ss_pred             CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          237 DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       237 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ....|...++++.+||.+||+.||.+|||+.++++|
T Consensus       234 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          234 RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            667777789999999999999999999999999876


No 179
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.2e-47  Score=370.54  Aligned_cols=256  Identities=22%  Similarity=0.372  Sum_probs=209.9

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEE----EcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEE
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLAR----NLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEV   87 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~----~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~   87 (441)
                      .+..+..++|++++.||+|+||+||+|+    +..+++.||+|++....   ....+.+.+|+.+++.++||||++++++
T Consensus         3 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~   79 (295)
T 3ugc_A            3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGV   79 (295)
T ss_dssp             ---CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CcCcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            3456778999999999999999999999    56789999999986542   3445788999999999999999999999


Q ss_pred             EEe--CCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecC
Q 013522           88 MAS--KSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG  163 (441)
Q Consensus        88 ~~~--~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFG  163 (441)
                      +..  ...+|+||||+.|++|.+++..  .++++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        80 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg  159 (295)
T 3ugc_A           80 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG  159 (295)
T ss_dssp             ECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred             EecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCc
Confidence            854  4568999999999999999976  459999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccC-CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH---------------
Q 013522          164 LSAFSEHLKQD-GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV---------------  227 (441)
Q Consensus       164 la~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~---------------  227 (441)
                      ++......... .......|++.|+|||++.+..+ +.++|||||||++|+|++|..||......               
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~  238 (295)
T 3ugc_A          160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF-SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV  238 (295)
T ss_dssp             SCC-------------CTTCGGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHH
T ss_pred             ccccccCCcceeeeccCCCCccceeCcHHhcCCCC-ChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhH
Confidence            99865432211 12234457888999999988777 48999999999999999999998754321               


Q ss_pred             -HHHHHHHc-CCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          228 -SMYRKIYR-GDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       228 -~~~~~i~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                       .....+.. ...+.|..+++++.+||.+||+.||++|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          239 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence             12222222 345667789999999999999999999999999975


No 180
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=2.8e-47  Score=374.98  Aligned_cols=258  Identities=22%  Similarity=0.404  Sum_probs=221.9

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEc-------CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcce
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNL-------QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVE   83 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-------~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~   83 (441)
                      ....+..++|++++.||+|+||+||+|++.       .++..||+|++....  .......+.+|+.+++.+ +||||++
T Consensus        28 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~  105 (334)
T 2pvf_A           28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIIN  105 (334)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEee
Confidence            345667789999999999999999999986       467789999997543  234567889999999999 8999999


Q ss_pred             EEEEEEeCCEEEEEEeccCCCchHHHHhcC-----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCC
Q 013522           84 LHEVMASKSKIYFAMDLVKGGELFNKIAKG-----------------RLREDVARVYFQQLISAVDFCHSRGVYHRDLKP  146 (441)
Q Consensus        84 l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~-----------------~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp  146 (441)
                      +++++.+.+..|+||||+.||+|.+++...                 .+++..+..++.||+.||.|||++||+||||||
T Consensus       106 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  185 (334)
T 2pvf_A          106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA  185 (334)
T ss_dssp             EEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCcc
Confidence            999999999999999999999999999753                 388999999999999999999999999999999


Q ss_pred             CcEEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCc
Q 013522          147 ENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDN  225 (441)
Q Consensus       147 ~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~  225 (441)
                      +|||++.++.+||+|||++................+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+
T Consensus       186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~  264 (334)
T 2pvf_A          186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIP  264 (334)
T ss_dssp             GGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCc-ChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence            999999999999999999975443222222334457889999999987666 489999999999999999 999999998


Q ss_pred             HHHHHHHHHcCC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          226 IVSMYRKIYRGD-FKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       226 ~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ...+...+..+. ...|..+++++.++|.+||..||.+|||+.+++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          265 VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            888887777664 45677899999999999999999999999999874


No 181
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.9e-47  Score=371.20  Aligned_cols=261  Identities=24%  Similarity=0.414  Sum_probs=212.6

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC--CCCcceEEEEEEeCC
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK--HKHIVELHEVMASKS   92 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--hpnIv~l~~~~~~~~   92 (441)
                      .+..++|++++.||+|+||+||+|.+. +++.||+|++..... .....+.+.+|+.+++.++  ||||+++++++.+.+
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~  101 (313)
T 3cek_A           24 SVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ  101 (313)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS
T ss_pred             eeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCC
Confidence            345667999999999999999999984 589999999976543 2345678999999999997  599999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      ..|+||| +.+++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||+++ +.+||+|||++......
T Consensus       102 ~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~  179 (313)
T 3cek_A          102 YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD  179 (313)
T ss_dssp             EEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred             EEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence            9999999 557899999976 67999999999999999999999999999999999999964 89999999999865443


Q ss_pred             ccCCcccccccCCCccchhhhhcc----------CCCCCcccHHHHHHHHHHHhhCCCCCCCCc-HHHHHHHHHcC--CC
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKK----------GYDGAKADIWSCGVILYVLLAGFLPFQDDN-IVSMYRKIYRG--DF  238 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~----------~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~-~~~~~~~i~~~--~~  238 (441)
                      .........+||+.|+|||++.+.          ...+.++|||||||++|+|++|..||.... .......+...  ..
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  259 (313)
T 3cek_A          180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  259 (313)
T ss_dssp             ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred             cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccccc
Confidence            333334466799999999998652          234589999999999999999999998753 33334444443  34


Q ss_pred             CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          239 KCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       239 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      .+|...++++.+||.+||..||.+|||+.++++||||+...
T Consensus       260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence            56777899999999999999999999999999999998643


No 182
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-47  Score=378.53  Aligned_cols=258  Identities=21%  Similarity=0.322  Sum_probs=216.5

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEc-----CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNL-----QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEV   87 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~   87 (441)
                      ..+-.++|++++.||+|+||+||+|++.     .++..||+|++.....  ....+.+.+|+.+++.+ +||||++++++
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  117 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGA  117 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            3455678999999999999999999973     4667899999975432  23356789999999999 89999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHHHhhcCcEecc
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIAKG------------------------RLREDVARVYFQQLISAVDFCHSRGVYHRD  143 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~~~------------------------~l~~~~~~~~~~qll~aL~ylH~~gi~HrD  143 (441)
                      +...+..|+||||++||+|.+++...                        .+++..+..++.||+.||.|||++||+|||
T Consensus       118 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  197 (344)
T 1rjb_A          118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  197 (344)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             EeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            99999999999999999999999752                        278999999999999999999999999999


Q ss_pred             CCCCcEEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCC
Q 013522          144 LKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQ  222 (441)
Q Consensus       144 Lkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~  222 (441)
                      |||+|||++.++.+||+|||++................||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.
T Consensus       198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~  276 (344)
T 1rjb_A          198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY-TIKSDVWSYGILLWEIFSLGVNPYP  276 (344)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCC-ChhHhHHHHHHHHHHHHcCCCCCcc
Confidence            999999999999999999999976544332223345568899999999988776 489999999999999998 999998


Q ss_pred             CCcHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcc
Q 013522          223 DDNIVSMYRKIYRG--DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSW  274 (441)
Q Consensus       223 ~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpw  274 (441)
                      +.+.......+...  ....|..+++++.+||.+||..||.+|||+.+++++..
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~  330 (344)
T 1rjb_A          277 GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  330 (344)
T ss_dssp             TCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence            87654444444333  34557789999999999999999999999999998643


No 183
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=4.3e-47  Score=365.04  Aligned_cols=256  Identities=24%  Similarity=0.363  Sum_probs=213.2

Q ss_pred             CCCCCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhh----HHHHHHHHHHHHhCCCCCcceE
Q 013522            9 GGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGM----MEQIKREISVMKMVKHKHIVEL   84 (441)
Q Consensus         9 ~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~----~~~~~~Ei~il~~l~hpnIv~l   84 (441)
                      .....+....++|++.+.||+|+||+||+|++..+++.||+|++..........    .+.+.+|+.+++.++||||+++
T Consensus         9 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   88 (287)
T 4f0f_A            9 PKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL   88 (287)
T ss_dssp             ---CCCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cchhhhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhh
Confidence            334456678899999999999999999999999999999999997654332211    2678999999999999999999


Q ss_pred             EEEEEeCCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcC--cEeccCCCCcEEeCCCCC----
Q 013522           85 HEVMASKSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRG--VYHRDLKPENLLLDEDGN----  156 (441)
Q Consensus        85 ~~~~~~~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~g--i~HrDLkp~NILl~~~~~----  156 (441)
                      ++++.+..  ++||||+.+++|.+.+..  ..+++..+..++.|++.||+|||++|  |+||||||+|||++.++.    
T Consensus        89 ~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~  166 (287)
T 4f0f_A           89 YGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV  166 (287)
T ss_dssp             EEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSC
T ss_pred             heeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCce
Confidence            99997666  699999999999998864  56999999999999999999999999  999999999999988876    


Q ss_pred             -eEEeecCccccccccccCCcccccccCCCccchhhhhcc-CCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHH--HHHH
Q 013522          157 -LKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKK-GYDGAKADIWSCGVILYVLLAGFLPFQDDNIVS--MYRK  232 (441)
Q Consensus       157 -vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~-~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~--~~~~  232 (441)
                       +||+|||++....     .......||+.|+|||++... ...+.++|||||||++|+|++|..||...+...  ....
T Consensus       167 ~~kl~Dfg~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~  241 (287)
T 4f0f_A          167 CAKVADFGLSQQSV-----HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM  241 (287)
T ss_dssp             CEEECCCTTCBCCS-----SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHH
T ss_pred             eEEeCCCCcccccc-----ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHH
Confidence             9999999987432     234456799999999998432 223578999999999999999999998754332  2333


Q ss_pred             HHcC--CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          233 IYRG--DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       233 i~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      +...  ....|..+++.+.+||.+||+.||.+|||+.++++
T Consensus       242 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            3333  34567789999999999999999999999999985


No 184
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.3e-47  Score=375.73  Aligned_cols=251  Identities=18%  Similarity=0.233  Sum_probs=205.6

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS--   92 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--   92 (441)
                      .+-.++|++++.||+|+||+||+|++  .++.||+|++....    .......+|+.+++.++||||+++++++.+..  
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   93 (322)
T 3soc_A           20 YFQSMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV   93 (322)
T ss_dssp             EETTEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS
T ss_pred             ccchhhchhhheecccCceEEEEEEE--CCCEEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC
Confidence            34567899999999999999999998  48999999996543    23345667999999999999999999998743  


Q ss_pred             --EEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc----------CcEeccCCCCcEEeCCCCCeEEe
Q 013522           93 --KIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSR----------GVYHRDLKPENLLLDEDGNLKVT  160 (441)
Q Consensus        93 --~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~----------gi~HrDLkp~NILl~~~~~vkl~  160 (441)
                        .+|+||||+++|+|.+++..+.+++..+..++.|++.||.|||+.          ||+||||||+|||++.++.+||+
T Consensus        94 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~  173 (322)
T 3soc_A           94 DVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA  173 (322)
T ss_dssp             SEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred             CceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence              479999999999999999988899999999999999999999999          99999999999999999999999


Q ss_pred             ecCccccccccccCCcccccccCCCccchhhhhccCC----CCCcccHHHHHHHHHHHhhCCCCCCCCc-----------
Q 013522          161 DFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGY----DGAKADIWSCGVILYVLLAGFLPFQDDN-----------  225 (441)
Q Consensus       161 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~----~~~~~DiwSlGvil~~ll~G~~Pf~~~~-----------  225 (441)
                      |||+|...............+||+.|+|||++.+...    .+.++|||||||++|+|++|..||.+..           
T Consensus       174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~  253 (322)
T 3soc_A          174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI  253 (322)
T ss_dssp             CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred             cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence            9999976554433334455789999999999976322    2357899999999999999999997532           


Q ss_pred             -----HHHHHHHHHcCCC--CCCCC-----CCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          226 -----IVSMYRKIYRGDF--KCPPW-----FSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       226 -----~~~~~~~i~~~~~--~~~~~-----~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                           ...+...+.....  ..+..     .++++.+||.+||+.||++|||+.++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                 2233333322221  11111     2345999999999999999999999986


No 185
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=8.7e-48  Score=383.38  Aligned_cols=254  Identities=26%  Similarity=0.487  Sum_probs=209.0

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-----------CCCcce
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-----------HKHIVE   83 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-----------hpnIv~   83 (441)
                      ....++|++++.||+|+||+||+|++..+++.||+|++....    ...+.+.+|+.+++.++           ||||++
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~   90 (373)
T 1q8y_A           15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILK   90 (373)
T ss_dssp             EETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCC
T ss_pred             cccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHH
Confidence            445689999999999999999999999999999999997543    23467889999999886           899999


Q ss_pred             EEEEEEeCC----EEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhc-CcEeccCCCCcEEeC---
Q 013522           84 LHEVMASKS----KIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSR-GVYHRDLKPENLLLD---  152 (441)
Q Consensus        84 l~~~~~~~~----~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~-gi~HrDLkp~NILl~---  152 (441)
                      +++++...+    .+++||||+ |++|.+++..   +.+++..+..++.||+.||.|||++ ||+||||||+|||++   
T Consensus        91 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~  169 (373)
T 1q8y_A           91 LLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD  169 (373)
T ss_dssp             CCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEE
T ss_pred             HHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccC
Confidence            999997654    899999999 8899999975   4599999999999999999999998 999999999999995   


Q ss_pred             ---CCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcH---
Q 013522          153 ---EDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNI---  226 (441)
Q Consensus       153 ---~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~---  226 (441)
                         ..+.+||+|||++.....     .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.   
T Consensus       170 ~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~pf~~~~~~~~  243 (373)
T 1q8y_A          170 SPENLIQIKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLFEPDEGHSY  243 (373)
T ss_dssp             TTTTEEEEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCC-CTHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             CCcCcceEEEcccccccccCC-----CCCCCCCCccccCcHHHhCCCC-CchHhHHHHHHHHHHHHhCCCCCCCCccccc
Confidence               344799999999975432     2345579999999999988776 5899999999999999999999986542   


Q ss_pred             ---HHHHHHHH------------------------------------------cCCCCCCCCCCHHHHHHHHHhcCCCCC
Q 013522          227 ---VSMYRKIY------------------------------------------RGDFKCPPWFSSEARRLITKLLDPNPN  261 (441)
Q Consensus       227 ---~~~~~~i~------------------------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~  261 (441)
                         ......+.                                          .....+++.+++++.+||.+||+.||.
T Consensus       244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  323 (373)
T 1q8y_A          244 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPR  323 (373)
T ss_dssp             -CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTT
T ss_pred             CChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcc
Confidence               11111111                                          112233344567899999999999999


Q ss_pred             CCCCHHHHhcCcccCccC
Q 013522          262 SRIAISKIMESSWFKKSA  279 (441)
Q Consensus       262 ~R~t~~eil~hpwf~~~~  279 (441)
                      +|||+.++++||||+...
T Consensus       324 ~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          324 KRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             TCBCHHHHHTCGGGTTCT
T ss_pred             ccCCHHHHhhChhhhccc
Confidence            999999999999998654


No 186
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=1.2e-47  Score=372.92  Aligned_cols=257  Identities=23%  Similarity=0.344  Sum_probs=218.3

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEE-----cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARN-----LQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHE   86 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~   86 (441)
                      ......++|++++.||+|+||+||+|++     ..+++.||+|++.....  ....+.+.+|+.+++.+ +||||+++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~   94 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLG   94 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh--HHHHHHHHHHHHHHhhcccCCCeeeEEE
Confidence            3456678999999999999999999985     45778999999975532  23457899999999999 9999999999


Q ss_pred             EEEeCCEEEEEEeccCCCchHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCC
Q 013522           87 VMASKSKIYFAMDLVKGGELFNKIAKG-------------------RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPE  147 (441)
Q Consensus        87 ~~~~~~~~~lv~E~~~gg~L~~~i~~~-------------------~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~  147 (441)
                      ++.+.+..|+||||+.+|+|.+++...                   .+++..+..++.||+.||.|||++||+||||||+
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  174 (313)
T 1t46_A           95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR  174 (313)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccc
Confidence            999999999999999999999999753                   3899999999999999999999999999999999


Q ss_pred             cEEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcH
Q 013522          148 NLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNI  226 (441)
Q Consensus       148 NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~  226 (441)
                      |||++.++.+||+|||++................||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+...
T Consensus       175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~  253 (313)
T 1t46_A          175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY-TFESDVWSYGIFLWELFSLGSSPYPGMPV  253 (313)
T ss_dssp             GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred             eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence            99999999999999999976544332223345568889999999987766 489999999999999998 9999988664


Q ss_pred             HHHHHHH-HcC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          227 VSMYRKI-YRG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       227 ~~~~~~i-~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ....... ..+ ....+..+++.+.+||.+||+.||.+|||+.+++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          254 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             SHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            4333333 332 334466789999999999999999999999999864


No 187
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=3.3e-47  Score=365.78  Aligned_cols=254  Identities=23%  Similarity=0.381  Sum_probs=224.1

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      ..+.+..++|++.+.||+|+||+||+|.+..++..||+|++....    ...+.+.+|+.+++.++||||+++++++.+.
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   81 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE   81 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence            356677889999999999999999999999999999999997543    2457888999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                      +..|+||||+.|++|.+++..   ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus        82 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  161 (288)
T 3kfa_A           82 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM  161 (288)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred             CCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence            999999999999999999975   45899999999999999999999999999999999999999999999999999764


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCH
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSS  246 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~  246 (441)
                      .... ........+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+... ....|..+++
T Consensus       162 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T 3kfa_A          162 TGDT-YTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE  239 (288)
T ss_dssp             CSSS-SEEETTEEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCH
T ss_pred             cCCc-cccccCCccccCcCChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCH
Confidence            4221 122334557889999999988776 489999999999999999 99999998877777776665 4556778999


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          247 EARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+.+||.+||..||.+|||+.++++
T Consensus       240 ~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          240 KVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhCCChhhCcCHHHHHH
Confidence            9999999999999999999999976


No 188
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.9e-47  Score=375.63  Aligned_cols=254  Identities=20%  Similarity=0.352  Sum_probs=210.8

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEE----EEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSM----AMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~v----AiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      .+..++|++++.||+|+||+||+|++..+++.+    |+|.+....  .......+.+|+.+++.++||||+++++++.+
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   88 (327)
T 3lzb_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred             ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence            345689999999999999999999999888876    555553322  22346788999999999999999999999987


Q ss_pred             CCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           91 KSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        91 ~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                      .. .++|+||+.+|+|.+++..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        89 ~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A           89 ST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             SS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred             CC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence            65 7899999999999999975  57999999999999999999999999999999999999999999999999999865


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCH
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSS  246 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~  246 (441)
                      .............||+.|+|||++.+..+. .++|||||||++|+|++ |..||.+.+...+...+..+. .+.|+.+++
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (327)
T 3lzb_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI  246 (327)
T ss_dssp             ------------CCCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCH
T ss_pred             cCccccccccCCCccccccCHHHHcCCCCC-hHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCH
Confidence            543333334455678899999999887774 89999999999999999 999999988877777776654 566778999


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          247 EARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ++.+||.+||..||.+|||+.++++.
T Consensus       247 ~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          247 DVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99999999999999999999999863


No 189
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=4.6e-47  Score=360.80  Aligned_cols=248  Identities=19%  Similarity=0.288  Sum_probs=216.3

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC--
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK--   91 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--   91 (441)
                      ..+..++|++.+.||+|+||+||+|++  +++.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.  
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   81 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA   81 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCC-HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC
Confidence            455678999999999999999999998  5899999999765432 34457799999999999999999999999877  


Q ss_pred             CEEEEEEeccCCCchHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC--cEeccCCCCcEEeCCCCCeEEeecCccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAKG---RLREDVARVYFQQLISAVDFCHSRG--VYHRDLKPENLLLDEDGNLKVTDFGLSA  166 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~~---~l~~~~~~~~~~qll~aL~ylH~~g--i~HrDLkp~NILl~~~~~vkl~DFGla~  166 (441)
                      ...++||||++||+|.+++...   .+++..+..++.||+.||.|||++|  |+||||||+|||++.++.++|+|||++.
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~  161 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF  161 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEecccee
Confidence            7899999999999999999863   4899999999999999999999999  9999999999999999999999998865


Q ss_pred             cccccccCCcccccccCCCccchhhhhccCCCC--CcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcC--CCCCCC
Q 013522          167 FSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDG--AKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRG--DFKCPP  242 (441)
Q Consensus       167 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~--~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~--~~~~~~  242 (441)
                      ..       ......||+.|+|||++.+..+..  .++|||||||++|+|++|..||.+.+.......+...  ....|+
T Consensus       162 ~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  234 (271)
T 3kmu_A          162 SF-------QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP  234 (271)
T ss_dssp             TT-------SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCT
T ss_pred             ee-------cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCC
Confidence            32       123457899999999998765542  3799999999999999999999998887776666544  345677


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          243 WFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       243 ~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+++++.++|.+||+.||++|||+.++++
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          235 GISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            89999999999999999999999999985


No 190
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=5.1e-47  Score=371.88  Aligned_cols=254  Identities=23%  Similarity=0.375  Sum_probs=217.8

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEE--EEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSM--AMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMA   89 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~v--AiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~   89 (441)
                      -+.+-.++|++.+.||+|+||+||+|++..++..+  |+|.+....  .....+.+.+|+.+++.+ +||||+++++++.
T Consensus        19 ~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~   96 (327)
T 1fvr_A           19 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACE   96 (327)
T ss_dssp             SSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEE
T ss_pred             cccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeee
Confidence            34556689999999999999999999999898865  999886432  223456788999999999 9999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHhcC-----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAKG-----------------RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD  152 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~~-----------------~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~  152 (441)
                      +.+..|+||||++|++|.+++...                 .+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~  176 (327)
T 1fvr_A           97 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG  176 (327)
T ss_dssp             ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred             eCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc
Confidence            999999999999999999999753                 589999999999999999999999999999999999999


Q ss_pred             CCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHH
Q 013522          153 EDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYR  231 (441)
Q Consensus       153 ~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~  231 (441)
                      .++.+||+|||++.....   ........+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+......
T Consensus       177 ~~~~~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~  252 (327)
T 1fvr_A          177 ENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE  252 (327)
T ss_dssp             GGGCEEECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             CCCeEEEcccCcCccccc---cccccCCCCCccccChhhhccccC-CchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH
Confidence            999999999999874322   122234457889999999987766 489999999999999998 999999999888888


Q ss_pred             HHHcC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          232 KIYRG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       232 ~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      .+..+ ....|..+++.+.+||.+||..||.+|||+.+++++
T Consensus       253 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          253 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            87766 345667789999999999999999999999999875


No 191
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=8.2e-47  Score=367.92  Aligned_cols=257  Identities=26%  Similarity=0.398  Sum_probs=199.6

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++++.||+|+||+||+|++..+|+.||+|++...... ......+.++..+++.++||||+++++++.+.+.+|
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            4557899999999999999999999999999999999765432 223344555666788899999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhc-CcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           96 FAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSR-GVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~-gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      +||||+ ++.+......  +.+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.....  
T Consensus       101 lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~--  177 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD--  177 (318)
T ss_dssp             EEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             EEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC--
Confidence            999999 5555555543  6799999999999999999999995 999999999999999999999999999875432  


Q ss_pred             cCCcccccccCCCccchhhhhc----cCCCCCcccHHHHHHHHHHHhhCCCCCCC-CcHHHHHHHHHcCCCC-CC--CCC
Q 013522          173 QDGLLHTTCGTPAYVAPEVISK----KGYDGAKADIWSCGVILYVLLAGFLPFQD-DNIVSMYRKIYRGDFK-CP--PWF  244 (441)
Q Consensus       173 ~~~~~~~~~gt~~y~APE~l~~----~~~~~~~~DiwSlGvil~~ll~G~~Pf~~-~~~~~~~~~i~~~~~~-~~--~~~  244 (441)
                       .......+||+.|+|||++..    ....+.++|||||||++|+|++|..||.. .+.......+..+..+ .|  ..+
T Consensus       178 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (318)
T 2dyl_A          178 -DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF  256 (318)
T ss_dssp             ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCC
T ss_pred             -CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCC
Confidence             223345679999999999952    22335899999999999999999999987 4445555666555433 23  347


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          245 SSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       245 ~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      ++++.+||.+||+.||.+|||+.++++||||+.
T Consensus       257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            999999999999999999999999999999975


No 192
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=3.5e-47  Score=366.58  Aligned_cols=256  Identities=22%  Similarity=0.443  Sum_probs=201.3

Q ss_pred             CCCCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           10 GDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        10 ~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      ....+.+..++|++++.||+|+||+||+|++.   ..||+|++..... .....+.+.+|+.+++.++||||++++++. 
T Consensus        15 ~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-   89 (289)
T 3og7_A           15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-   89 (289)
T ss_dssp             ---CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-
T ss_pred             CCCCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-
Confidence            34556788999999999999999999999863   3599999975543 334567899999999999999999999965 


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      .....++||||+.|++|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~  169 (289)
T 3og7_A           90 TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE  169 (289)
T ss_dssp             CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred             cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccc
Confidence            55678999999999999999964  5699999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccCCcccccccCCCccchhhhh---ccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHHcCCCC----
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVIS---KKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV-SMYRKIYRGDFK----  239 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~---~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~-~~~~~i~~~~~~----  239 (441)
                      ..............||+.|+|||++.   +..+ +.++|||||||++|+|++|..||.+.+.. .....+..+...    
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  248 (289)
T 3og7_A          170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS  248 (289)
T ss_dssp             --------------CCCTTCCHHHHC----CCS-CHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTT
T ss_pred             cccccccccccccCCCccccCchhhcccCCCCC-CcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchh
Confidence            55433344455678999999999986   3333 57899999999999999999999875443 444444444332    


Q ss_pred             -CCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          240 -CPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       240 -~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                       .+..+++.+.+||.+||..||.+|||+.++++
T Consensus       249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence             23467899999999999999999999999985


No 193
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=7.2e-47  Score=359.16  Aligned_cols=250  Identities=22%  Similarity=0.369  Sum_probs=219.4

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      +-.++|++.+.||+|+||+||+|.+. +++.||+|++......    .+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   79 (267)
T 3t9t_A            5 IDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPIC   79 (267)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             EchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeE
Confidence            44578999999999999999999985 6788999999765432    367889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc
Q 013522           96 FAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ  173 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~  173 (441)
                      +||||++|++|.+++..  +.+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++....... 
T Consensus        80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-  158 (267)
T 3t9t_A           80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-  158 (267)
T ss_dssp             EEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-
T ss_pred             EEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc-
Confidence            99999999999999975  568999999999999999999999999999999999999999999999999987543221 


Q ss_pred             CCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCHHHHHH
Q 013522          174 DGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSSEARRL  251 (441)
Q Consensus       174 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~l  251 (441)
                      ........||+.|+|||++.+..+ +.++||||||+++|+|++ |..||...+.......+..+. ...|..+++.+.++
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l  237 (267)
T 3t9t_A          159 YTSSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQI  237 (267)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred             ccccccccccccccChhhhcCCCc-cchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHH
Confidence            112234457889999999987776 489999999999999999 999999998888888887764 44566789999999


Q ss_pred             HHHhcCCCCCCCCCHHHHhcC
Q 013522          252 ITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       252 i~~~L~~dP~~R~t~~eil~h  272 (441)
                      |.+||+.||++|||+.+++++
T Consensus       238 i~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          238 MNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999864


No 194
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-46  Score=362.09  Aligned_cols=255  Identities=22%  Similarity=0.321  Sum_probs=218.9

Q ss_pred             cccCCeEEee-eecccCceEEEEEEEc--CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           16 LLHGKYELGR-MLGHGTFAKVYLARNL--QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        16 ~~~~~y~i~~-~LG~G~fg~Vy~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      +..++|.+.. .||+|+||+||+|.+.  .++..||+|++....  .....+.+.+|+.+++.++||||+++++++ ..+
T Consensus         6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~   82 (287)
T 1u59_A            6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAE   82 (287)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESS
T ss_pred             ccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCC
Confidence            4567788887 9999999999999864  467889999997643  234567899999999999999999999999 556


Q ss_pred             EEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      ..|+||||+.|++|.+++..  +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            78999999999999999964  5699999999999999999999999999999999999999999999999999976532


Q ss_pred             ccc-CCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCHH
Q 013522          171 LKQ-DGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSSE  247 (441)
Q Consensus       171 ~~~-~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~  247 (441)
                      ... ........||+.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+..+. ...|+.++++
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~  241 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKF-SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE  241 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHH
T ss_pred             CcceeeccccccccccccCHHHhccCCC-CchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHH
Confidence            211 112234457899999999987666 489999999999999998 999999988888887777764 5667889999


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHhcCcc
Q 013522          248 ARRLITKLLDPNPNSRIAISKIMESSW  274 (441)
Q Consensus       248 ~~~li~~~L~~dP~~R~t~~eil~hpw  274 (441)
                      +.+||.+||..||++|||+.+++++.+
T Consensus       242 l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          242 LYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            999999999999999999999998754


No 195
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=9.2e-47  Score=365.15  Aligned_cols=257  Identities=25%  Similarity=0.408  Sum_probs=212.6

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEE----EcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEE
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLAR----NLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEV   87 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~----~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~   87 (441)
                      .+......+|++++.||+|+||+||+|+    +..+++.||+|++.....  ......+.+|+.+++.++||||++++++
T Consensus        14 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~   91 (302)
T 4e5w_A           14 DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGI   91 (302)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCeeeeeeE
Confidence            3445566789999999999999999999    567899999999975532  2345788999999999999999999999


Q ss_pred             EEeC--CEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecC
Q 013522           88 MASK--SKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFG  163 (441)
Q Consensus        88 ~~~~--~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFG  163 (441)
                      +.+.  ..+|+||||+.|++|.+++..  +.+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        92 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  171 (302)
T 4e5w_A           92 CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG  171 (302)
T ss_dssp             EEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             EecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccc
Confidence            9876  679999999999999999954  679999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccC-CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC---------------cHH
Q 013522          164 LSAFSEHLKQD-GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD---------------NIV  227 (441)
Q Consensus       164 la~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~---------------~~~  227 (441)
                      ++......... .......||+.|+|||++.+..+. .++|||||||++|+|++|..|+...               ...
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  250 (302)
T 4e5w_A          172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFY-IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVT  250 (302)
T ss_dssp             TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHH
T ss_pred             ccccccCCCcceeccCCCCCCccccCCeeecCCCCC-cchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHH
Confidence            99765432211 223455688899999999887664 8899999999999999999886432               122


Q ss_pred             HHHHHHHcC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          228 SMYRKIYRG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       228 ~~~~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .....+..+ ..+.|+.+++.+.+||.+||+.||.+|||+.++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          251 RLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            233333333 45567889999999999999999999999999975


No 196
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.6e-47  Score=375.31  Aligned_cols=258  Identities=22%  Similarity=0.363  Sum_probs=193.7

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHH-HHHhCCCCCcceEEEEEEeCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREIS-VMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~   92 (441)
                      .....++|++++.||+|+||+||+|.+..+|+.||+|++.....  ......+.+|+. +++.++||||+++++++.+.+
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~   94 (327)
T 3aln_A           17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG   94 (327)
T ss_dssp             ECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS
T ss_pred             cccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC
Confidence            45667899999999999999999999999999999999976532  223345556665 777889999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHh------cCCCCHHHHHHHHHHHHHHHHHHhhc-CcEeccCCCCcEEeCCCCCeEEeecCcc
Q 013522           93 KIYFAMDLVKGGELFNKIA------KGRLREDVARVYFQQLISAVDFCHSR-GVYHRDLKPENLLLDEDGNLKVTDFGLS  165 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~------~~~l~~~~~~~~~~qll~aL~ylH~~-gi~HrDLkp~NILl~~~~~vkl~DFGla  165 (441)
                      ..|+||||+.| +|.+++.      .+.+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||++
T Consensus        95 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~  173 (327)
T 3aln_A           95 DCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS  173 (327)
T ss_dssp             EEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred             ceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCc
Confidence            99999999986 7777765      46799999999999999999999999 9999999999999999999999999998


Q ss_pred             ccccccccCCcccccccCCCccchhhhh----ccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHHcCCCC-
Q 013522          166 AFSEHLKQDGLLHTTCGTPAYVAPEVIS----KKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV-SMYRKIYRGDFK-  239 (441)
Q Consensus       166 ~~~~~~~~~~~~~~~~gt~~y~APE~l~----~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~-~~~~~i~~~~~~-  239 (441)
                      .....   ........||+.|+|||++.    +..+ +.++|||||||++|+|++|..||...+.. .....+..+..+ 
T Consensus       174 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  249 (327)
T 3aln_A          174 GQLVD---SIAKTRDAGCRPYMAPERIDPSASRQGY-DVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQ  249 (327)
T ss_dssp             CC---------------------------------C-CSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCC
T ss_pred             eeccc---ccccccCCCCccccCceeeccccCcCCC-CchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCC
Confidence            75432   22233457999999999983    3444 58999999999999999999999875432 222222222221 


Q ss_pred             CC----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          240 CP----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       240 ~~----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      .+    ..+++.+.+||.+||..||.+|||+.++++||||...
T Consensus       250 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence            22    3578999999999999999999999999999999754


No 197
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=6.5e-47  Score=371.72  Aligned_cols=256  Identities=21%  Similarity=0.346  Sum_probs=217.2

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCc-----EEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGK-----SMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEV   87 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~   87 (441)
                      .....++|++++.||+|+||+||+|.+..+++     .||+|++....  .....+.+.+|+.+++.+ +||||++++++
T Consensus        41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            34566889999999999999999999977665     79999997543  223467889999999999 89999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIAK---------------GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD  152 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~~---------------~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~  152 (441)
                      +.+.+..|+||||+++|+|.+++..               ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            9999999999999999999999863               3579999999999999999999999999999999999999


Q ss_pred             CCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHH
Q 013522          153 EDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYR  231 (441)
Q Consensus       153 ~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~  231 (441)
                      .++.+||+|||++................||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+........
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~  277 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY-TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY  277 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCC-ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH
Confidence            999999999999976543322223344567889999999988776 489999999999999998 999998866544444


Q ss_pred             HHHcC--CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          232 KIYRG--DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       232 ~i~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      .+...  ....|..+++.+.+||.+||+.||.+|||+.+++++
T Consensus       278 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          278 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            43332  344567789999999999999999999999999863


No 198
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.6e-46  Score=368.33  Aligned_cols=256  Identities=19%  Similarity=0.295  Sum_probs=214.0

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCC----cEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTG----KSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~----~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      ..+...+|++.+.||+|+||+||+|.+..++    ..||+|++....  .......+.+|+.+++.++||||+++++++.
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  116 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS  116 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence            4566789999999999999999999986553    359999997543  2334567889999999999999999999999


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      +.+..|+||||+.|++|.+++..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus       117 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          117 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             cCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence            99999999999999999999975  5799999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccCC-cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCC
Q 013522          168 SEHLKQDG-LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWF  244 (441)
Q Consensus       168 ~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~  244 (441)
                      ........ ......+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..+ ..+.+..+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  275 (333)
T 1mqb_A          197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKF-TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC  275 (333)
T ss_dssp             --------------CCCGGGSCHHHHHSCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTC
T ss_pred             hccccccccccCCCCccccccCchhcccCCC-CchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccC
Confidence            54322111 1223346788999999987766 489999999999999998 99999998888888887766 45567778


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          245 SSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       245 ~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ++.+.+||.+||+.||.+|||+.+++++
T Consensus       276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          276 PSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             BHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999999864


No 199
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=6.7e-47  Score=369.92  Aligned_cols=257  Identities=25%  Similarity=0.372  Sum_probs=213.9

Q ss_pred             CCCccccCCe-EEeeeecccCceEEEEEEE----cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEE
Q 013522           12 DRPTLLHGKY-ELGRMLGHGTFAKVYLARN----LQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHE   86 (441)
Q Consensus        12 ~~~~~~~~~y-~i~~~LG~G~fg~Vy~a~~----~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~   86 (441)
                      ..+.++.++| ++++.||+|+||+||++.+    ..+++.||+|++....  .....+.+.+|+.+++.++||||+++++
T Consensus        23 g~~~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~  100 (318)
T 3lxp_A           23 GDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKG  100 (318)
T ss_dssp             -CCCBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CCCceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEE
Confidence            3456788888 9999999999999988764    4578999999997653  2345678999999999999999999999


Q ss_pred             EEEe--CCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCc
Q 013522           87 VMAS--KSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGL  164 (441)
Q Consensus        87 ~~~~--~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGl  164 (441)
                      ++.+  ...+|+||||+.+++|.+++....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus       101 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~  180 (318)
T 3lxp_A          101 CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGL  180 (318)
T ss_dssp             EEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred             EEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccc
Confidence            9987  47899999999999999999988899999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccC-CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH---------------H
Q 013522          165 SAFSEHLKQD-GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV---------------S  228 (441)
Q Consensus       165 a~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~---------------~  228 (441)
                      +......... .......||+.|+|||++.+..+. .++|||||||++|+|++|..||......               .
T Consensus       181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~  259 (318)
T 3lxp_A          181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY-YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR  259 (318)
T ss_dssp             CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHH
T ss_pred             cccccccccccccccCCCCCceeeChHHhcCCCCC-cHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHH
Confidence            9765432111 123345688899999999877664 8999999999999999999999764322               1


Q ss_pred             HHHHHHcC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          229 MYRKIYRG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       229 ~~~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      ....+..+ ..+.|..+++++.+||.+||+.||.+|||+.++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          260 LTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            22223332 34567789999999999999999999999999985


No 200
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=5.4e-46  Score=361.54  Aligned_cols=254  Identities=30%  Similarity=0.540  Sum_probs=207.6

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++.+.||+|+||+||+|.+..+|+.||+|++.............+.+|+.+++.++||||+++++++.+.+..|
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  108 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN  108 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence            45678999999999999999999999999999999998655445556778999999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           96 FAMDLVKGGELFNKIAK-----GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~-----~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      +||||+.+++|.+++..     ..+++..++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred             EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence            99999999999998863     5689999999999999999999999999999999999999999999999999875443


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCC--cHHHHHHHHHcCCCCC--CCCCCH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDD--NIVSMYRKIYRGDFKC--PPWFSS  246 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~--~~~~~~~~i~~~~~~~--~~~~~~  246 (441)
                      .  ........||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.  +.......+.....+.  +..+++
T Consensus       189 ~--~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (310)
T 2wqm_A          189 K--TTAAHSLVGTPYYMSPERIHENGY-NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE  265 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCH
T ss_pred             C--CccccccCCCeeEeChHHhCCCCC-CchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCH
Confidence            2  222345679999999999987766 48999999999999999999999764  3445556666554432  246899


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          247 EARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ++.+||.+||..||.+|||+.+++++
T Consensus       266 ~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          266 ELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999999999863


No 201
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=8.1e-47  Score=361.82  Aligned_cols=252  Identities=27%  Similarity=0.450  Sum_probs=216.6

Q ss_pred             CCCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           11 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        11 ~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      ...+..+.++|++.+.||+|+||.||+|++..+++.||+|++....       +.+.+|+.+++.++||||+++++++..
T Consensus         3 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~   75 (284)
T 2a19_B            3 HTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDG   75 (284)
T ss_dssp             CCCCHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             ccccchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEec
Confidence            3445678889999999999999999999999999999999997543       246689999999999999999998854


Q ss_pred             ----------------CCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe
Q 013522           91 ----------------KSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL  151 (441)
Q Consensus        91 ----------------~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl  151 (441)
                                      ...+|+||||+.+++|.+++..   ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~  155 (284)
T 2a19_B           76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL  155 (284)
T ss_dssp             EEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             cccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE
Confidence                            4568999999999999999964   579999999999999999999999999999999999999


Q ss_pred             CCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHH
Q 013522          152 DEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYR  231 (441)
Q Consensus       152 ~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~  231 (441)
                      +.++.+||+|||++.....   ........||+.|+|||++.+..+ +.++|||||||++|+|++|..||...  .....
T Consensus       156 ~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~  229 (284)
T 2a19_B          156 VDTKQVKIGDFGLVTSLKN---DGKRTRSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFET--SKFFT  229 (284)
T ss_dssp             EETTEEEECCCTTCEESSC---CSCCCCCCSCCTTSCHHHHHCSCC-CTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHH
T ss_pred             cCCCCEEECcchhheeccc---cccccccCCcccccChhhhccCCC-cchhhhHHHHHHHHHHHhcCCcchhH--HHHHH
Confidence            9999999999999875432   223445679999999999987766 58999999999999999999987532  23334


Q ss_pred             HHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          232 KIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       232 ~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      .+..+  ..++.+++.+.+||.+||..||.+|||+.++++++|.-.
T Consensus       230 ~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          230 DLRDG--IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             HHHTT--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             Hhhcc--cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            44433  346678999999999999999999999999999987643


No 202
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=1.3e-46  Score=366.41  Aligned_cols=255  Identities=22%  Similarity=0.324  Sum_probs=208.1

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcC---CCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQ---TGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      +..++|++++.||+|+||+||+|.+..   ++..||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  109 (313)
T 3brb_A           31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS  109 (313)
T ss_dssp             CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred             cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence            456789999999999999999998765   556899999976543 2344677899999999999999999999997655


Q ss_pred             -----EEEEEEeccCCCchHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEe
Q 013522           93 -----KIYFAMDLVKGGELFNKIA-------KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVT  160 (441)
Q Consensus        93 -----~~~lv~E~~~gg~L~~~i~-------~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~  160 (441)
                           ..|+||||+.+++|.+++.       .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus       110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~  189 (313)
T 3brb_A          110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVA  189 (313)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred             ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEe
Confidence                 3599999999999999983       2469999999999999999999999999999999999999999999999


Q ss_pred             ecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CC
Q 013522          161 DFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DF  238 (441)
Q Consensus       161 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~  238 (441)
                      |||++................+++.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+..+ ..
T Consensus       190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~  268 (313)
T 3brb_A          190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY-TSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL  268 (313)
T ss_dssp             SCSCC----------------CCGGGSCHHHHHSSCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC
T ss_pred             ecCcceecccccccCcccccCCCccccCchhhcCCCc-cchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC
Confidence            9999976543322223344567889999999987766 489999999999999999 99999998887777777766 34


Q ss_pred             CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          239 KCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       239 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ..|..+++.+.+||.+||..||.+|||+.+++++
T Consensus       269 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          269 KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5677899999999999999999999999999864


No 203
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=8.9e-47  Score=361.37  Aligned_cols=258  Identities=22%  Similarity=0.388  Sum_probs=208.1

Q ss_pred             CCCCCCCCCCCC--CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCC
Q 013522            1 MATSNSNGGGDD--RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKH   78 (441)
Q Consensus         1 m~~~~~~~~~~~--~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h   78 (441)
                      |+.|.+......  ...+..++|++.+.||+|+||+||+|.+  +|+.||+|++....     ..+.+.+|+.+++.++|
T Consensus         1 mg~s~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h   73 (278)
T 1byg_A            1 MGGSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRH   73 (278)
T ss_dssp             --------------CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTCCC
T ss_pred             CCCCccchhhhhhccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCC
Confidence            666655444332  2356678999999999999999999998  58899999986543     34678899999999999


Q ss_pred             CCcceEEEEEEeC-CEEEEEEeccCCCchHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC
Q 013522           79 KHIVELHEVMASK-SKIYFAMDLVKGGELFNKIAKG---RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED  154 (441)
Q Consensus        79 pnIv~l~~~~~~~-~~~~lv~E~~~gg~L~~~i~~~---~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~  154 (441)
                      |||+++++++.+. +..|+||||+.+++|.+++...   .+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus        74 ~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~  153 (278)
T 1byg_A           74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED  153 (278)
T ss_dssp             TTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             CCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCC
Confidence            9999999997544 5789999999999999999752   38999999999999999999999999999999999999999


Q ss_pred             CCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHH
Q 013522          155 GNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKI  233 (441)
Q Consensus       155 ~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i  233 (441)
                      +.+||+|||++......     .....+++.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+
T Consensus       154 ~~~~l~Dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~  227 (278)
T 1byg_A          154 NVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKF-STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV  227 (278)
T ss_dssp             SCEEECCCCC-----------------CCTTTSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH
T ss_pred             CcEEEeecccccccccc-----ccCCCccccccCHHHhCCCCC-CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            99999999998753321     234468899999999987766 489999999999999998 99999988877777777


Q ss_pred             HcC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          234 YRG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       234 ~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      ..+ ....+..+++.+.++|.+||..||.+|||+.++++
T Consensus       228 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          228 EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             TTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            665 34567789999999999999999999999999975


No 204
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=4.6e-47  Score=369.36  Aligned_cols=255  Identities=24%  Similarity=0.395  Sum_probs=215.9

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEE-----cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARN-----LQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVM   88 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~   88 (441)
                      ....++|++++.||+|+||+||+|++     ..+++.||+|++....  .......+.+|+.+++.+ +||||+++++++
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            45668999999999999999999985     3577899999997553  223456789999999999 799999999998


Q ss_pred             EeCC-EEEEEEeccCCCchHHHHhcCC-----------------CCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEE
Q 013522           89 ASKS-KIYFAMDLVKGGELFNKIAKGR-----------------LREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLL  150 (441)
Q Consensus        89 ~~~~-~~~lv~E~~~gg~L~~~i~~~~-----------------l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NIL  150 (441)
                      ...+ .+|+||||+.|++|.+++....                 +++..+..++.||+.||.|||++||+||||||+||+
T Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil  180 (316)
T 2xir_A          101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  180 (316)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence            7654 5999999999999999997632                 789999999999999999999999999999999999


Q ss_pred             eCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHH-H
Q 013522          151 LDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIV-S  228 (441)
Q Consensus       151 l~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~-~  228 (441)
                      ++.++.+||+|||++................||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.... .
T Consensus       181 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~  259 (316)
T 2xir_A          181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY-TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE  259 (316)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred             ECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccc-cchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence            99999999999999975543222223345668999999999988776 489999999999999998 99999876533 3


Q ss_pred             HHHHHHcC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          229 MYRKIYRG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       229 ~~~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ....+..+ ....|..+++.+.++|.+||+.||.+|||+.++++|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            34444443 356677899999999999999999999999999986


No 205
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=1.2e-46  Score=376.79  Aligned_cols=254  Identities=20%  Similarity=0.322  Sum_probs=208.0

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEc---CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNL---QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      .+..++|++.+.||+|+||+||+|++.   .++..||+|++....  .....+.+.+|+.++++++||||+++++++.+.
T Consensus        41 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  118 (373)
T 2qol_A           41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS  118 (373)
T ss_dssp             BCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             hcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC
Confidence            445678999999999999999999986   467789999996542  234567899999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      ...|+||||++||+|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  198 (373)
T 2qol_A          119 KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE  198 (373)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             CceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence            999999999999999999976  469999999999999999999999999999999999999999999999999998654


Q ss_pred             ccccCC-cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCH
Q 013522          170 HLKQDG-LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSS  246 (441)
Q Consensus       170 ~~~~~~-~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~  246 (441)
                      ...... ......+|+.|+|||++.+..+. .++|||||||++|+|++ |..||...+.......+..+ ..+.+..+++
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~  277 (373)
T 2qol_A          199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA  277 (373)
T ss_dssp             ---------------CTTSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBH
T ss_pred             cCCccceeccCCCcCCCccChhhhccCCcC-chhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccH
Confidence            322111 11223457889999999887764 89999999999999998 99999998888888777665 3445667899


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          247 EARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+.+||.+||+.||.+|||+.++++
T Consensus       278 ~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          278 ALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhCcChhhCcCHHHHHH
Confidence            9999999999999999999999976


No 206
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=2.4e-46  Score=360.89  Aligned_cols=253  Identities=20%  Similarity=0.306  Sum_probs=214.4

Q ss_pred             cccCCeEEee-eecccCceEEEEEEE--cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           16 LLHGKYELGR-MLGHGTFAKVYLARN--LQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        16 ~~~~~y~i~~-~LG~G~fg~Vy~a~~--~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      +-.++|++.+ .||+|+||+||+|.+  ..+++.||+|++..... .....+.+.+|+.+++.++||||+++++++ ..+
T Consensus        13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~   90 (291)
T 1xbb_A           13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE   90 (291)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred             ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence            4457899998 999999999999954  56788999999976532 224467899999999999999999999999 567


Q ss_pred             EEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      ..|+||||+.|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        91 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  170 (291)
T 1xbb_A           91 SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD  170 (291)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             CcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence            78999999999999999986 56999999999999999999999999999999999999999999999999998754322


Q ss_pred             ccC-CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCHHH
Q 013522          172 KQD-GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSSEA  248 (441)
Q Consensus       172 ~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~  248 (441)
                      ... .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..+. ...|..+++.+
T Consensus       171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  249 (291)
T 1xbb_A          171 ENYYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREM  249 (291)
T ss_dssp             CSEEEC----CCCGGGCCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             CCcccccccCCCCceeeChHHhccCCC-ChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence            111 11223446789999999987766 489999999999999999 999999988888887777664 45677899999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhc
Q 013522          249 RRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .++|.+||+.||.+|||+.++++
T Consensus       250 ~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          250 YDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999975


No 207
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=4.7e-46  Score=381.90  Aligned_cols=250  Identities=24%  Similarity=0.393  Sum_probs=217.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      ..+..++|++.+.||+|+||+||+|.+. ++..||||++.....    ..+.+.+|+.+|+.++||||+++++++. .+.
T Consensus       183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          183 WEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             SBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred             eeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc----cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc
Confidence            4566788999999999999999999985 577899999976432    3578899999999999999999999986 567


Q ss_pred             EEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      +|+||||+.+|+|.+++..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  336 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED  336 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence            8999999999999999975   3689999999999999999999999999999999999999999999999999986432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCHHH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSSEA  248 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~  248 (441)
                      ... .......+|+.|+|||++....+ +.++|||||||+||+|++ |..||.+.+..+....+..+ ..+.|..+++++
T Consensus       337 ~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l  414 (454)
T 1qcf_A          337 NEY-TAREGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL  414 (454)
T ss_dssp             HHH-HTTCSSSSCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHH
T ss_pred             Cce-eccCCCcccccccCHHHhccCCC-CcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence            211 11223446788999999987776 489999999999999999 99999998888888777765 456677899999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhc
Q 013522          249 RRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+||.+||..||++|||+.+|++
T Consensus       415 ~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          415 YNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHHH
Confidence            99999999999999999999975


No 208
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.1e-46  Score=384.18  Aligned_cols=270  Identities=22%  Similarity=0.330  Sum_probs=198.5

Q ss_pred             CCCCCCCCCCCCC---CccccC--CeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh
Q 013522            1 MATSNSNGGGDDR---PTLLHG--KYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKM   75 (441)
Q Consensus         1 m~~~~~~~~~~~~---~~~~~~--~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~   75 (441)
                      ||++.+.......   ..+..+  +|++.+.||+|+||+||. ....+|+.||||++......      .+.+|+.+|+.
T Consensus         1 M~ss~s~~~~~~~~~~~~~~i~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~------~~~~E~~~l~~   73 (432)
T 3p23_A            1 MGSSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFS------FADREVQLLRE   73 (432)
T ss_dssp             -----------------CEEETTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEE------ECHHHHHHHHH
T ss_pred             CCCCcccccCcCcccCCcEEEccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHH------HHHHHHHHHHh
Confidence            7766665543322   223333  599999999999999764 33468999999999654332      34589999999


Q ss_pred             C-CCCCcceEEEEEEeCCEEEEEEeccCCCchHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC
Q 013522           76 V-KHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKG--RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD  152 (441)
Q Consensus        76 l-~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~--~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~  152 (441)
                      + +||||+++++++.+....|+|||||. |+|.+++...  .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        74 l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~  152 (432)
T 3p23_A           74 SDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILIS  152 (432)
T ss_dssp             SCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEEC
T ss_pred             ccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEe
Confidence            9 89999999999999999999999996 5999999763  456667789999999999999999999999999999995


Q ss_pred             CC-----CCeEEeecCcccccccccc-CCcccccccCCCccchhhhhcc--CCCCCcccHHHHHHHHHHHhh-CCCCCCC
Q 013522          153 ED-----GNLKVTDFGLSAFSEHLKQ-DGLLHTTCGTPAYVAPEVISKK--GYDGAKADIWSCGVILYVLLA-GFLPFQD  223 (441)
Q Consensus       153 ~~-----~~vkl~DFGla~~~~~~~~-~~~~~~~~gt~~y~APE~l~~~--~~~~~~~DiwSlGvil~~ll~-G~~Pf~~  223 (441)
                      .+     ..+||+|||+|........ .......+||+.|+|||++.+.  ...+.++|||||||++|+|++ |..||..
T Consensus       153 ~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~  232 (432)
T 3p23_A          153 MPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK  232 (432)
T ss_dssp             CCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred             cCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence            32     3578999999976543211 1234456799999999999742  223578999999999999999 9999977


Q ss_pred             CcHHHHHHHHHcCCCCC---CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          224 DNIVSMYRKIYRGDFKC---PPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       224 ~~~~~~~~~i~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      .........+.......   +...+..+.+||.+||+.||.+|||+.++++||||+..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          233 SLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             TTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             hhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence            65544333322222221   12245668999999999999999999999999999754


No 209
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=3.5e-46  Score=357.77  Aligned_cols=255  Identities=24%  Similarity=0.355  Sum_probs=214.3

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcC---CCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQ---TGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      ...+..++|++.+.||+|+||+||+|++..   ++..||+|++....  .....+.+.+|+.+++.++||||+++++++.
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   83 (281)
T 3cc6_A            6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE   83 (281)
T ss_dssp             CCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC
T ss_pred             cceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEc
Confidence            445677899999999999999999999754   34469999997653  2344678999999999999999999999986


Q ss_pred             eCCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           90 SKSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        90 ~~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      +. ..|+||||+.|++|.+++..  ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus        84 ~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           84 EE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             SS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             CC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence            54 56899999999999999975  4599999999999999999999999999999999999999999999999999875


Q ss_pred             ccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCC
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFS  245 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~  245 (441)
                      ..... ........+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+..+ ..+.|..++
T Consensus       163 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (281)
T 3cc6_A          163 IEDED-YYKASVTRLPIKWMSPESINFRRF-TTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCP  240 (281)
T ss_dssp             C----------CCCCCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCC
T ss_pred             ccccc-ccccccCCCCcceeCchhhccCCC-CchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCC
Confidence            44321 112234557889999999987776 489999999999999998 99999877666666666554 455677799


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +.+.+||.+||..||++|||+.+++++
T Consensus       241 ~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          241 PVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            999999999999999999999999865


No 210
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=4.3e-46  Score=359.15  Aligned_cols=250  Identities=21%  Similarity=0.314  Sum_probs=208.2

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEE-EeCCE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVM-ASKSK   93 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-~~~~~   93 (441)
                      ..+.++|++++.||+|+||+||+|++..+|+.||+|++......     +.+.+|+.+++.++|++++..+..+ .....
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (296)
T 3uzp_A            5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDY   79 (296)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTE
T ss_pred             ceeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCc
Confidence            34678999999999999999999999999999999998765432     3688999999999988866655554 67788


Q ss_pred             EEEEEeccCCCchHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe---CCCCCeEEeecCccccc
Q 013522           94 IYFAMDLVKGGELFNKIA--KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL---DEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~--~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl---~~~~~vkl~DFGla~~~  168 (441)
                      .|+||||+ +++|.+++.  .+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus        80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  158 (296)
T 3uzp_A           80 NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             eEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence            99999999 899999997  3679999999999999999999999999999999999999   48889999999999765


Q ss_pred             cccccC-----CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCc---HHHHHHHHHcCCCCC
Q 013522          169 EHLKQD-----GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDN---IVSMYRKIYRGDFKC  240 (441)
Q Consensus       169 ~~~~~~-----~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~---~~~~~~~i~~~~~~~  240 (441)
                      ......     ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+   ....+..+.......
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  237 (296)
T 3uzp_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQ-SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST  237 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccccccCChhhhcCCCC-CcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC
Confidence            432221     12345679999999999988776 589999999999999999999998632   222333333322222


Q ss_pred             -----CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          241 -----PPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       241 -----~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                           ++.+++++.+||.+||+.||.+|||+.++++
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                 3668999999999999999999999999975


No 211
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=5.8e-46  Score=380.84  Aligned_cols=244  Identities=23%  Similarity=0.436  Sum_probs=213.0

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-E
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS-K   93 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-~   93 (441)
                      .+-.++|++.+.||+|+||+||+|.+  +|+.||||++....     ..+.+.+|+.+|++++||||+++++++.... .
T Consensus       189 ~i~~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  261 (450)
T 1k9a_A          189 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG  261 (450)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSC
T ss_pred             ccChHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCc
Confidence            45567899999999999999999998  57899999997543     2467889999999999999999999987655 7


Q ss_pred             EEEEEeccCCCchHHHHhc-C--CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK-G--RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~-~--~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      +|+||||+.+|+|.+++.. +  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       262 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  341 (450)
T 1k9a_A          262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  341 (450)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence            9999999999999999975 3  379999999999999999999999999999999999999999999999999874322


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCHHH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSSEA  248 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~  248 (441)
                           ......+++.|+|||++.+..++ .++|||||||++|+|++ |..||.+.+..+....+..+ ..+.|..+++.+
T Consensus       342 -----~~~~~~~~~~y~aPE~~~~~~~~-~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l  415 (450)
T 1k9a_A          342 -----TQDTGKLPVKWTAPEALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAV  415 (450)
T ss_dssp             ----------CCCTTTSCHHHHHSSCCC-HHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHH
T ss_pred             -----cccCCCCCcceeCHHHhcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHH
Confidence                 12234678999999999887764 89999999999999998 99999988777777777766 456788899999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhc
Q 013522          249 RRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+||.+||..||.+|||+.++++
T Consensus       416 ~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          416 YDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999999975


No 212
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=7.6e-46  Score=354.87  Aligned_cols=251  Identities=22%  Similarity=0.348  Sum_probs=216.7

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      .+.+..++|++++.||+|+||+||+|.+. ++..||+|++.....    ..+.+.+|+.+++.++||||+++++++.+ +
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~   80 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-E   80 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEcC-C
Confidence            35667789999999999999999999974 667899999975432    24678899999999999999999999864 5


Q ss_pred             EEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      ..|+||||+.|++|.+++..   ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        81 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  160 (279)
T 1qpc_A           81 PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE  160 (279)
T ss_dssp             SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence            68999999999999999975   269999999999999999999999999999999999999999999999999997644


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCHH
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSSE  247 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~  247 (441)
                      ... ........+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..+. ...|..+++.
T Consensus       161 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (279)
T 1qpc_A          161 DNE-YTAREGAKFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE  238 (279)
T ss_dssp             SSC-EECCTTCCCCTTTSCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred             Ccc-cccccCCCCccCccChhhhccCCC-CchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHH
Confidence            321 112234457889999999987666 489999999999999999 999999988888887777663 4556778999


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          248 ARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       248 ~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      +.+||.+||..||++|||+.++++
T Consensus       239 l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          239 LYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhccChhhCCCHHHHHH
Confidence            999999999999999999999975


No 213
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=3.1e-47  Score=372.45  Aligned_cols=253  Identities=23%  Similarity=0.350  Sum_probs=210.2

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++.+.||+|+||+||+|++ .+|+.||+|++....   ....+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  111 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI  111 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCC---SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred             HHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence            3568999999999999999999996 478999999986543   234678899999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           96 FAMDLVKGGELFNKIAKG-----RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~~-----~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      +||||+.||+|.+++...     .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  191 (321)
T 2qkw_B          112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTE  191 (321)
T ss_dssp             EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSS
T ss_pred             EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            999999999999999652     489999999999999999999999999999999999999999999999999976443


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHH-------HHHHHcCCC-----
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSM-------YRKIYRGDF-----  238 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~-------~~~i~~~~~-----  238 (441)
                      ..........+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........       ......+..     
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (321)
T 2qkw_B          192 LDQTHLSTVVKGTLGYIDPEYFIKGRL-TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD  270 (321)
T ss_dssp             SSCCCCBCCCEEETTTCCHHHHHHCBC-CTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSS
T ss_pred             ccccccccccCCCccccCHHHhcCCCC-CcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcC
Confidence            333333455679999999999987776 4899999999999999999999976432111       111111111     


Q ss_pred             -----CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCc
Q 013522          239 -----KCPPWFSSEARRLITKLLDPNPNSRIAISKIMESS  273 (441)
Q Consensus       239 -----~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hp  273 (441)
                           ..++..+..+.+++.+||+.||++|||+.+++++.
T Consensus       271 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             SSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence                 11222456789999999999999999999999764


No 214
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=2.3e-46  Score=388.22  Aligned_cols=252  Identities=22%  Similarity=0.378  Sum_probs=220.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      ..+-..+|++.+.||+|+||+||+|.+..++..||||++.....    ..+.+.+|+.+|+.++||||+++++++.+...
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~  290 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP  290 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence            45566789999999999999999999999999999999975532    25678999999999999999999999999999


Q ss_pred             EEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      +|+||||+.+|+|.+++..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred             EEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence            9999999999999999975   4589999999999999999999999999999999999999999999999999986432


Q ss_pred             cccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCHHH
Q 013522          171 LKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSSEA  248 (441)
Q Consensus       171 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~  248 (441)
                      .. ........+++.|+|||++.+..+ +.++|||||||+||+|++ |..||.+.+.......+..+ ....|..+++.+
T Consensus       371 ~~-~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  448 (495)
T 1opk_A          371 DT-YTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV  448 (495)
T ss_dssp             CC-EECCTTCCCCGGGCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHH
T ss_pred             Cc-eeecCCCcCCcceeCHhHHhcCCC-CcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence            11 111223446788999999987766 489999999999999999 99999998877777776655 345677899999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhc
Q 013522          249 RRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+||.+||+.||.+|||+.++++
T Consensus       449 ~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          449 YELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCcChhHCcCHHHHHH
Confidence            99999999999999999999975


No 215
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=3.5e-46  Score=359.53  Aligned_cols=250  Identities=22%  Similarity=0.330  Sum_probs=202.6

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEE-EeCCE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVM-ASKSK   93 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-~~~~~   93 (441)
                      ..+.++|++++.||+|+||+||+|++..+++.||+|++......     ..+.+|+.+++.++|++++..+..+ ...+.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (296)
T 4hgt_A            5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDY   79 (296)
T ss_dssp             ------CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTE
T ss_pred             cccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCc
Confidence            34678999999999999999999999999999999987655432     3577899999999988777666554 77889


Q ss_pred             EEEEEeccCCCchHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe---CCCCCeEEeecCccccc
Q 013522           94 IYFAMDLVKGGELFNKIA--KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL---DEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~--~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl---~~~~~vkl~DFGla~~~  168 (441)
                      .++||||+ +++|.+++.  .+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus        80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           80 NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             eEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            99999999 899999997  3679999999999999999999999999999999999999   78899999999999865


Q ss_pred             cccccC-----CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcH---HHHHHHHHcCCCCC
Q 013522          169 EHLKQD-----GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNI---VSMYRKIYRGDFKC  240 (441)
Q Consensus       169 ~~~~~~-----~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~---~~~~~~i~~~~~~~  240 (441)
                      ......     .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.   ...+..+.......
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  237 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQ-SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST  237 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCC-CchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence            433221     12345679999999999988776 5899999999999999999999976432   12222332222222


Q ss_pred             C-----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          241 P-----PWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       241 ~-----~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      |     ..+++++.+||.+||+.||++|||+.++++
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            2     567999999999999999999999999976


No 216
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.5e-46  Score=361.53  Aligned_cols=255  Identities=22%  Similarity=0.356  Sum_probs=207.8

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcC-CCc--EEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQ-TGK--SMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~-~~~--~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      .+..++|++++.||+|+||+||+|++.. +++  .||+|++...........+.+.+|+.+++.++||||+++++++.+.
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   93 (291)
T 1u46_A           14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP   93 (291)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence            4456789999999999999999998643 333  6999999766544445678899999999999999999999999876


Q ss_pred             CEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      . .++||||+.+++|.+++..  +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        94 ~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  172 (291)
T 1u46_A           94 P-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP  172 (291)
T ss_dssp             S-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             C-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence            5 8899999999999999975  569999999999999999999999999999999999999999999999999987654


Q ss_pred             ccccC-CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC--CCCCCCCC
Q 013522          170 HLKQD-GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD--FKCPPWFS  245 (441)
Q Consensus       170 ~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~  245 (441)
                      ..... .......+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+....  .+.+..++
T Consensus       173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (291)
T 1u46_A          173 QNDDHYVMQEHRKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP  251 (291)
T ss_dssp             C-CCEEEC-----CCGGGCCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCC
T ss_pred             ccccchhhhccCCCCceeeCchhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcC
Confidence            32211 12234567889999999987766 489999999999999999 999999998888888887654  34456789


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      +++.++|.+||..||.+|||+.++++
T Consensus       252 ~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          252 QDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHH
Confidence            99999999999999999999999986


No 217
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.2e-47  Score=380.80  Aligned_cols=254  Identities=24%  Similarity=0.428  Sum_probs=210.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS-   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-   92 (441)
                      +..+.++|++.+.||+|+||+||+|++..+|+.||+|++......  ...+.+.+|+.+++.++||||+++++++...+ 
T Consensus         4 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~   81 (396)
T 4eut_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT   81 (396)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT
T ss_pred             CCCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCC
Confidence            346778999999999999999999999999999999999765432  23567789999999999999999999998755 


Q ss_pred             -EEEEEEeccCCCchHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe----CCCCCeEEeecC
Q 013522           93 -KIYFAMDLVKGGELFNKIAKG----RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL----DEDGNLKVTDFG  163 (441)
Q Consensus        93 -~~~lv~E~~~gg~L~~~i~~~----~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl----~~~~~vkl~DFG  163 (441)
                       ..|+||||+.||+|.+++...    .+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG  161 (396)
T 4eut_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (396)
T ss_dssp             CCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred             CeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence             789999999999999999752    39999999999999999999999999999999999999    777789999999


Q ss_pred             ccccccccccCCcccccccCCCccchhhhhcc-------CCCCCcccHHHHHHHHHHHhhCCCCCCC----CcHHHHHHH
Q 013522          164 LSAFSEHLKQDGLLHTTCGTPAYVAPEVISKK-------GYDGAKADIWSCGVILYVLLAGFLPFQD----DNIVSMYRK  232 (441)
Q Consensus       164 la~~~~~~~~~~~~~~~~gt~~y~APE~l~~~-------~~~~~~~DiwSlGvil~~ll~G~~Pf~~----~~~~~~~~~  232 (441)
                      ++.....   .......+||+.|+|||++.+.       ...+.++|||||||++|+|++|..||..    ........+
T Consensus       162 ~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~  238 (396)
T 4eut_A          162 AARELED---DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK  238 (396)
T ss_dssp             GCEECCC---GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHH
T ss_pred             CceEccC---CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHH
Confidence            9976443   2234456799999999998652       1224789999999999999999999964    233455555


Q ss_pred             HHcCCCC-------------------CC------CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          233 IYRGDFK-------------------CP------PWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       233 i~~~~~~-------------------~~------~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +..+.+.                   .|      ..+++.+.+||.+||+.||++|||+.+++++
T Consensus       239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             HHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             HhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence            5554321                   11      1134578899999999999999999998654


No 218
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-45  Score=356.15  Aligned_cols=250  Identities=20%  Similarity=0.324  Sum_probs=212.8

Q ss_pred             CCeEEeeeecccCceEEEEEEEcCCCc---EEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEE-
Q 013522           19 GKYELGRMLGHGTFAKVYLARNLQTGK---SMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKI-   94 (441)
Q Consensus        19 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~---~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~-   94 (441)
                      -+|++.+.||+|+||+||+|.+..+++   .||+|++....  .....+.+.+|+.+++.++||||+++++++.+.+.. 
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   98 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP   98 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence            357888999999999999999766554   79999986532  334567889999999999999999999999776655 


Q ss_pred             EEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccc
Q 013522           95 YFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLK  172 (441)
Q Consensus        95 ~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~  172 (441)
                      ++||||+.+++|.+++..  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A           99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred             EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence            999999999999999986  568999999999999999999999999999999999999999999999999997543322


Q ss_pred             --cCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCHHH
Q 013522          173 --QDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSSEA  248 (441)
Q Consensus       173 --~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~  248 (441)
                        .........||+.|+|||.+.+..+ +.++|||||||++|+|++ |.+||...+.......+..+. ...|..+++.+
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  257 (298)
T 3pls_A          179 YYSVQQHRHARLPVKWTALESLQTYRF-TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSL  257 (298)
T ss_dssp             GGCSCCSSCTTCGGGGSCHHHHTTCCC-CHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHH
T ss_pred             ccccccCcCCCCCccccChhhhccCCC-ChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHH
Confidence              1223345568999999999987776 489999999999999999 566677777766666666654 45677789999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhc
Q 013522          249 RRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+||.+||+.||.+|||+.++++
T Consensus       258 ~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          258 YQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999976


No 219
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=7.6e-46  Score=358.26  Aligned_cols=251  Identities=23%  Similarity=0.320  Sum_probs=210.4

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCC---cEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEE-EeCCE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTG---KSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVM-ASKSK   93 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~---~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-~~~~~   93 (441)
                      ..+|++.+.||+|+||+||+|++..++   ..+|+|.+....  .....+.+.+|+.+++.++||||+++++++ ...+.
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS  101 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence            457999999999999999999975443   368999986532  334567899999999999999999999985 45678


Q ss_pred             EEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      .|+||||+.||+|.+++..  +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred             eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence            8999999999999999975  56899999999999999999999999999999999999999999999999999754332


Q ss_pred             cc--CCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCCC-CCCCCCCHH
Q 013522          172 KQ--DGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGDF-KCPPWFSSE  247 (441)
Q Consensus       172 ~~--~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~  247 (441)
                      ..  ........||+.|+|||++.+..+ +.++|||||||++|+|++ |.+||...+.......+..+.. ..|..+++.
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP  260 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHH
T ss_pred             chhccccccCCCCCccccChHHhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHH
Confidence            21  122334567889999999988776 489999999999999999 7788888777777777766654 346678999


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          248 ARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       248 ~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      +.++|.+||+.||.+|||+.++++
T Consensus       261 l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          261 LYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999999986


No 220
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.6e-45  Score=356.07  Aligned_cols=250  Identities=20%  Similarity=0.339  Sum_probs=201.2

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh--CCCCCcceEEEEEEe-
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKM--VKHKHIVELHEVMAS-   90 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~-   90 (441)
                      ...+.++|++.+.||+|+||+||+|++  +++.||+|++....      ...+.+|.+++..  ++||||+++++++.. 
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~   74 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIASDMTS   74 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEEeeccc
Confidence            356788999999999999999999998  79999999986432      3455667777766  799999999998654 


Q ss_pred             ---CCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHh--------hcCcEeccCCCCcEEeCCCCCeEE
Q 013522           91 ---KSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCH--------SRGVYHRDLKPENLLLDEDGNLKV  159 (441)
Q Consensus        91 ---~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH--------~~gi~HrDLkp~NILl~~~~~vkl  159 (441)
                         ...+|+||||+.+|+|.+++..+.+++..+..++.||+.||+|||        ++||+||||||+|||++.++.+||
T Consensus        75 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl  154 (301)
T 3q4u_A           75 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI  154 (301)
T ss_dssp             ETTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred             cCCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence               356899999999999999999888999999999999999999999        999999999999999999999999


Q ss_pred             eecCccccccccccC--CcccccccCCCccchhhhhccCCC-----CCcccHHHHHHHHHHHhhC----------CCCCC
Q 013522          160 TDFGLSAFSEHLKQD--GLLHTTCGTPAYVAPEVISKKGYD-----GAKADIWSCGVILYVLLAG----------FLPFQ  222 (441)
Q Consensus       160 ~DFGla~~~~~~~~~--~~~~~~~gt~~y~APE~l~~~~~~-----~~~~DiwSlGvil~~ll~G----------~~Pf~  222 (441)
                      +|||+|.........  ......+||+.|+|||++.+....     +.++|||||||++|+|++|          ..||.
T Consensus       155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~  234 (301)
T 3q4u_A          155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY  234 (301)
T ss_dssp             CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence            999999754332111  112345799999999999765332     2589999999999999999          88885


Q ss_pred             CCc----HHHHHHHHHcCC---CCCCCC-----CCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          223 DDN----IVSMYRKIYRGD---FKCPPW-----FSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       223 ~~~----~~~~~~~i~~~~---~~~~~~-----~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      ...    ............   ...|+.     +++.+.+||.+||+.||++|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            431    222233332221   222221     3467999999999999999999999985


No 221
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=4.1e-46  Score=368.61  Aligned_cols=253  Identities=16%  Similarity=0.175  Sum_probs=200.5

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcC---CCcEEEEEEeecccccch--------hhHHHHHHHHHHHHhCCCCCcceEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQ---TGKSMAMKVVGKDKVIKV--------GMMEQIKREISVMKMVKHKHIVELH   85 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~--------~~~~~~~~Ei~il~~l~hpnIv~l~   85 (441)
                      ..++|++++.||+|+||+||+|++..   ++..+|+|++........        .....+.+|+.+++.++||||++++
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~  114 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY  114 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence            34689999999999999999999987   788999999976532110        0123466789999999999999999


Q ss_pred             EEEEe----CCEEEEEEeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC--CeE
Q 013522           86 EVMAS----KSKIYFAMDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG--NLK  158 (441)
Q Consensus        86 ~~~~~----~~~~~lv~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~--~vk  158 (441)
                      +++..    ....|+||||+ |++|.+++.. +.+++..+..++.||+.||+|||++||+||||||+|||++.++  .+|
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~k  193 (345)
T 2v62_A          115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVY  193 (345)
T ss_dssp             EEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEE
T ss_pred             cccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEE
Confidence            99987    78899999999 9999999976 5799999999999999999999999999999999999999887  999


Q ss_pred             EeecCccccccccccC-----CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCC--CcHHHHHH
Q 013522          159 VTDFGLSAFSEHLKQD-----GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQD--DNIVSMYR  231 (441)
Q Consensus       159 l~DFGla~~~~~~~~~-----~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~--~~~~~~~~  231 (441)
                      |+|||++.........     ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+  .+......
T Consensus       194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~  272 (345)
T 2v62_A          194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVAL-SRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT  272 (345)
T ss_dssp             ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCC-CHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred             EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCC-CchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence            9999999765432211     12245679999999999987766 5899999999999999999999965  22222222


Q ss_pred             HHHcCCCCCC---------CCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          232 KIYRGDFKCP---------PWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       232 ~i~~~~~~~~---------~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .........|         ..+++++.+||.+||..||++|||+.++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            1111111122         268899999999999999999999999976


No 222
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=4.9e-46  Score=364.88  Aligned_cols=259  Identities=24%  Similarity=0.396  Sum_probs=214.1

Q ss_pred             CCCCCccc-cCCeEEeeeecccCceEEEEEE----EcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceE
Q 013522           10 GDDRPTLL-HGKYELGRMLGHGTFAKVYLAR----NLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVEL   84 (441)
Q Consensus        10 ~~~~~~~~-~~~y~i~~~LG~G~fg~Vy~a~----~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l   84 (441)
                      +....+++ .++|++++.||+|+||+||+|+    +..+++.||+|++....   ....+.+.+|+.+++.++||||+++
T Consensus        13 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~   89 (327)
T 3lxl_A           13 ACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKY   89 (327)
T ss_dssp             ----CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hcChhhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhcCCCceeEE
Confidence            33344444 4689999999999999999999    56789999999997543   3445678999999999999999999


Q ss_pred             EEEEE--eCCEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEe
Q 013522           85 HEVMA--SKSKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVT  160 (441)
Q Consensus        85 ~~~~~--~~~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~  160 (441)
                      ++++.  +....|+||||+.|++|.+++..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        90 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~  169 (327)
T 3lxl_A           90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA  169 (327)
T ss_dssp             EEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             EEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEc
Confidence            99886  56779999999999999999975  569999999999999999999999999999999999999999999999


Q ss_pred             ecCccccccccccC-CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcH-------------
Q 013522          161 DFGLSAFSEHLKQD-GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNI-------------  226 (441)
Q Consensus       161 DFGla~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~-------------  226 (441)
                      |||++......... .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.....             
T Consensus       170 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~  248 (327)
T 3lxl_A          170 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP  248 (327)
T ss_dssp             CGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CC
T ss_pred             ccccceecccCCccceeeccCCccccccCHHHhccCCC-ChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccc
Confidence            99999765432211 12334568889999999987766 5899999999999999999999865433             


Q ss_pred             --HHHHHHHHcC-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          227 --VSMYRKIYRG-DFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       227 --~~~~~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                        ......+..+ ..+.|+.+++.+.+||.+||++||.+|||+.+++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          249 ALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence              2223333333 345677899999999999999999999999999654


No 223
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2e-46  Score=365.47  Aligned_cols=253  Identities=25%  Similarity=0.366  Sum_probs=205.7

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE----eCC
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA----SKS   92 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~----~~~   92 (441)
                      ..++|++++.||+|+||+||+|++..+|+.||+|++....   ....+.+.+|+.+++.++||||+++++++.    ...
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH  103 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC---HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence            4568999999999999999999999999999999986542   345678899999999999999999999986    345


Q ss_pred             EEEEEEeccCCCchHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK-----GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~-----~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      ..|+||||+.+|+|.+++..     +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus       104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            78999999999999998864     5699999999999999999999999999999999999999999999999999865


Q ss_pred             ccccccCC-------cccccccCCCccchhhhhccCC--CCCcccHHHHHHHHHHHhhCCCCCCCCcH--HHHHHHHHc-
Q 013522          168 SEHLKQDG-------LLHTTCGTPAYVAPEVISKKGY--DGAKADIWSCGVILYVLLAGFLPFQDDNI--VSMYRKIYR-  235 (441)
Q Consensus       168 ~~~~~~~~-------~~~~~~gt~~y~APE~l~~~~~--~~~~~DiwSlGvil~~ll~G~~Pf~~~~~--~~~~~~i~~-  235 (441)
                      ........       ......||+.|+|||++.+...  .+.++|||||||++|+|++|..||.....  ......+.. 
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~  263 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ  263 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence            43211110       1124458999999999875432  25899999999999999999999954211  011112222 


Q ss_pred             CCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          236 GDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       236 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ...+.++.+++.+.+||.+||+.||.+|||+.+++++
T Consensus       264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            2234456789999999999999999999999999986


No 224
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=1.3e-45  Score=378.46  Aligned_cols=251  Identities=24%  Similarity=0.365  Sum_probs=213.4

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      .+.+..++|++.+.||+|+||+||+|.+.. +..||||++.....    ..+.+.+|+.+|+.++||||+++++++.+ +
T Consensus       178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~  251 (452)
T 1fmk_A          178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E  251 (452)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             ccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C
Confidence            345667889999999999999999999864 46799999976542    24678999999999999999999999876 6


Q ss_pred             EEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      ..|+||||+.+|+|.+++..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       252 ~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  331 (452)
T 1fmk_A          252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE  331 (452)
T ss_dssp             SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred             ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence            78999999999999999964   469999999999999999999999999999999999999999999999999997644


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCHH
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSSE  247 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~  247 (441)
                      ... ........+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+..+....+..+ ..+.|+.+++.
T Consensus       332 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~  409 (452)
T 1fmk_A          332 DNE-YTARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES  409 (452)
T ss_dssp             ------------CCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHH
T ss_pred             CCc-eecccCCcccccccCHhHHhcCCC-CccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHH
Confidence            211 112233457788999999987776 489999999999999999 99999998888888887766 45667889999


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          248 ARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       248 ~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      +.+||.+||+.||++|||+.++++
T Consensus       410 l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          410 LHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999999976


No 225
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=4.3e-46  Score=365.30  Aligned_cols=250  Identities=30%  Similarity=0.457  Sum_probs=187.9

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCcceEEEEEE-------
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-HKHIVELHEVMA-------   89 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~-------   89 (441)
                      ..+|++.+.||+|+||+||+|++..+++.||+|++....   ......+.+|+.+++.+. ||||+++++++.       
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~  103 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD  103 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence            458999999999999999999999999999999986543   244567889999999995 999999999984       


Q ss_pred             -eCCEEEEEEeccCCCchHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcC--cEeccCCCCcEEeCCCCCeEEeec
Q 013522           90 -SKSKIYFAMDLVKGGELFNKIAK----GRLREDVARVYFQQLISAVDFCHSRG--VYHRDLKPENLLLDEDGNLKVTDF  162 (441)
Q Consensus        90 -~~~~~~lv~E~~~gg~L~~~i~~----~~l~~~~~~~~~~qll~aL~ylH~~g--i~HrDLkp~NILl~~~~~vkl~DF  162 (441)
                       ....+++||||+. |+|.+++..    +.+++..+..++.||+.||.|||++|  |+||||||+|||++.++.+||+||
T Consensus       104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Df  182 (337)
T 3ll6_A          104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF  182 (337)
T ss_dssp             TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred             cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecC
Confidence             3456899999996 588888753    67999999999999999999999999  999999999999999999999999


Q ss_pred             CccccccccccC----------CcccccccCCCccchhhhh---ccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHH
Q 013522          163 GLSAFSEHLKQD----------GLLHTTCGTPAYVAPEVIS---KKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSM  229 (441)
Q Consensus       163 Gla~~~~~~~~~----------~~~~~~~gt~~y~APE~l~---~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~  229 (441)
                      |++.........          ......+||+.|+|||++.   +..+ +.++|||||||++|+|++|..||........
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~  261 (337)
T 3ll6_A          183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI-GEKQDIWALGCILYLLCFRQHPFEDGAKLRI  261 (337)
T ss_dssp             TTCBCCSSCC-------------------------------CCTTSCS-SHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCC-ChHHhHHHHHHHHHHHHhCCCCCcchhHHHh
Confidence            999765432211          1122556999999999983   3334 5899999999999999999999987655433


Q ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcc
Q 013522          230 YRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSW  274 (441)
Q Consensus       230 ~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpw  274 (441)
                      .....  ..+.+...++.+.+||.+||+.||.+|||+.+++++-+
T Consensus       262 ~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          262 VNGKY--SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             ----C--CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             hcCcc--cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            32211  23334567888999999999999999999999998743


No 226
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.3e-45  Score=376.42  Aligned_cols=255  Identities=25%  Similarity=0.372  Sum_probs=199.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKHIVELHEVMASKS   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~   92 (441)
                      ...+.+.|.+.+.||+|+||+||.+. ..+|+.||||++..+.      .+.+.+|+.+|+.+ +||||+++++++.+.+
T Consensus        10 ~~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~   82 (434)
T 2rio_A           10 EQSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDR   82 (434)
T ss_dssp             SCSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred             hhhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC
Confidence            34567788889999999999998754 4689999999986532      35678999999876 8999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhcCCC--------CHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCC----------
Q 013522           93 KIYFAMDLVKGGELFNKIAKGRL--------REDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDED----------  154 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~~~l--------~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~----------  154 (441)
                      .+|+|||||. |+|.+++.....        ++..+..++.||+.||+|||++||+||||||+|||++.+          
T Consensus        83 ~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~  161 (434)
T 2rio_A           83 FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTG  161 (434)
T ss_dssp             EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred             eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccC
Confidence            9999999996 599999986432        223456799999999999999999999999999999754          


Q ss_pred             ---CCeEEeecCccccccccccC--CcccccccCCCccchhhhhc------cCCCCCcccHHHHHHHHHHHhh-CCCCCC
Q 013522          155 ---GNLKVTDFGLSAFSEHLKQD--GLLHTTCGTPAYVAPEVISK------KGYDGAKADIWSCGVILYVLLA-GFLPFQ  222 (441)
Q Consensus       155 ---~~vkl~DFGla~~~~~~~~~--~~~~~~~gt~~y~APE~l~~------~~~~~~~~DiwSlGvil~~ll~-G~~Pf~  222 (441)
                         +.+||+|||++.........  ......+||+.|+|||++.+      ....+.++|||||||++|+|++ |..||.
T Consensus       162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~  241 (434)
T 2rio_A          162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG  241 (434)
T ss_dssp             CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence               47999999999865432211  12345689999999999965      1334689999999999999999 999998


Q ss_pred             CCcHHHHHHHHHcCCCCCCC-------CCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          223 DDNIVSMYRKIYRGDFKCPP-------WFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       223 ~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      +.....  ..+..+....+.       .+++++.+||.+||+.||.+|||+.++++||||+..
T Consensus       242 ~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          242 DKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             STTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             CchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence            765433  234444433322       235789999999999999999999999999999753


No 227
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=5.4e-46  Score=370.41  Aligned_cols=252  Identities=16%  Similarity=0.188  Sum_probs=199.6

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCC-----CcEEEEEEeecccccchh--------hHHHHHHHHHHHHhCCCCCcceE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQT-----GKSMAMKVVGKDKVIKVG--------MMEQIKREISVMKMVKHKHIVEL   84 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-----~~~vAiK~i~~~~~~~~~--------~~~~~~~Ei~il~~l~hpnIv~l   84 (441)
                      .++|++++.||+|+||+||+|.+..+     ++.||+|++.........        ......+|+..++.++||||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            34999999999999999999998764     588999998765321000        01234456667788899999999


Q ss_pred             EEEEEeC----CEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeC--CCCC
Q 013522           85 HEVMASK----SKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLD--EDGN  156 (441)
Q Consensus        85 ~~~~~~~----~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~--~~~~  156 (441)
                      ++++...    ...|+||||+ |++|.+++..  +.+++..+..++.||+.||.|||++||+||||||+|||++  .++.
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~  192 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ  192 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTC
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCe
Confidence            9998764    5689999999 9999999975  6799999999999999999999999999999999999999  8899


Q ss_pred             eEEeecCccccccccccCC-----cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH-HHH
Q 013522          157 LKVTDFGLSAFSEHLKQDG-----LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV-SMY  230 (441)
Q Consensus       157 vkl~DFGla~~~~~~~~~~-----~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~-~~~  230 (441)
                      +||+|||+|..........     .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... ...
T Consensus       193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~  271 (364)
T 3op5_A          193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAP-SRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV  271 (364)
T ss_dssp             EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCC-CchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence            9999999997654332211     1244569999999999988776 58999999999999999999999853211 111


Q ss_pred             HHHH---cCCC-------CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          231 RKIY---RGDF-------KCPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       231 ~~i~---~~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      ....   ....       -.+..+++++.++|..||..||.+|||+.++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          272 RDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            1110   0000       012467899999999999999999999999975


No 228
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=3.1e-45  Score=354.90  Aligned_cols=234  Identities=30%  Similarity=0.571  Sum_probs=194.4

Q ss_pred             CCccccCCeEEe-eeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHH-HhCCCCCcceEEEEEEe
Q 013522           13 RPTLLHGKYELG-RMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVM-KMVKHKHIVELHEVMAS   90 (441)
Q Consensus        13 ~~~~~~~~y~i~-~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il-~~l~hpnIv~l~~~~~~   90 (441)
                      ....+.++|.+. +.||+|+||+||+|.+..+++.||+|++...        ..+.+|+.++ +.++||||+++++++..
T Consensus        11 ~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~   82 (299)
T 3m2w_A           11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYEN   82 (299)
T ss_dssp             BCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             cccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhh
Confidence            345567888887 7899999999999999999999999998643        3567888888 66799999999999987


Q ss_pred             ----CCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC---CCCeEEe
Q 013522           91 ----KSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE---DGNLKVT  160 (441)
Q Consensus        91 ----~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~---~~~vkl~  160 (441)
                          ...+|+||||+.||+|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~  162 (299)
T 3m2w_A           83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT  162 (299)
T ss_dssp             EETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred             hcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEe
Confidence                7789999999999999999975   25999999999999999999999999999999999999998   7889999


Q ss_pred             ecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHH----HHcC
Q 013522          161 DFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRK----IYRG  236 (441)
Q Consensus       161 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~----i~~~  236 (441)
                      |||++.....                        ..+ +.++|||||||++|+|++|..||.+.+.......    +..+
T Consensus       163 Dfg~a~~~~~------------------------~~~-~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~  217 (299)
T 3m2w_A          163 DFGFAKETTG------------------------EKY-DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG  217 (299)
T ss_dssp             CCTTCEECTT------------------------CGG-GGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTT
T ss_pred             cccccccccc------------------------ccC-CchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhc
Confidence            9999863221                        123 4789999999999999999999987655433211    1222


Q ss_pred             CCCCC----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCccC
Q 013522          237 DFKCP----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSA  279 (441)
Q Consensus       237 ~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~~  279 (441)
                      ....|    ..+++++.+||.+||+.||.+|||+.++++||||+...
T Consensus       218 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          218 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            33333    45899999999999999999999999999999997643


No 229
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.7e-46  Score=363.27  Aligned_cols=251  Identities=22%  Similarity=0.359  Sum_probs=200.8

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC--CCCCcceEEEEEEeC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV--KHKHIVELHEVMASK   91 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l--~hpnIv~l~~~~~~~   91 (441)
                      ...+.++|++.+.||+|+||+||+|++  +++.||+|++....      .....+|..++..+  +||||+++++++...
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           32 QRTIAKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTE------EASWFRETEIYQTVLMRHENILGFIAADIKG  103 (337)
T ss_dssp             HTTHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred             ccccccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEeccc------cchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence            356778999999999999999999998  58999999986432      23445566666554  999999999999887


Q ss_pred             ----CEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc--------CcEeccCCCCcEEeCCCCCeEE
Q 013522           92 ----SKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSR--------GVYHRDLKPENLLLDEDGNLKV  159 (441)
Q Consensus        92 ----~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~--------gi~HrDLkp~NILl~~~~~vkl  159 (441)
                          ...|+||||+.||+|.+++....+++..+..++.|++.||.|||++        ||+||||||+|||++.++.+||
T Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl  183 (337)
T 3mdy_A          104 TGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI  183 (337)
T ss_dssp             CGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred             CCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence                7899999999999999999988899999999999999999999998        9999999999999999999999


Q ss_pred             eecCccccccccccCC--cccccccCCCccchhhhhccCCCCC-----cccHHHHHHHHHHHhhC----------CCCCC
Q 013522          160 TDFGLSAFSEHLKQDG--LLHTTCGTPAYVAPEVISKKGYDGA-----KADIWSCGVILYVLLAG----------FLPFQ  222 (441)
Q Consensus       160 ~DFGla~~~~~~~~~~--~~~~~~gt~~y~APE~l~~~~~~~~-----~~DiwSlGvil~~ll~G----------~~Pf~  222 (441)
                      +|||++..........  .....+||+.|+|||++.+..+...     ++|||||||++|+|++|          ..||.
T Consensus       184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~  263 (337)
T 3mdy_A          184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH  263 (337)
T ss_dssp             CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence            9999996543322111  1235679999999999987665432     38999999999999999          77775


Q ss_pred             CC-----cHHHHHHHHHcC--CCCCCC-----CCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          223 DD-----NIVSMYRKIYRG--DFKCPP-----WFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       223 ~~-----~~~~~~~~i~~~--~~~~~~-----~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ..     ........+...  ....|.     .+++++.+||.+||+.||.+|||+.++++|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            43     122222222222  222332     245679999999999999999999999875


No 230
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=2.8e-45  Score=363.52  Aligned_cols=244  Identities=14%  Similarity=0.193  Sum_probs=202.8

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcC--------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcce------
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQ--------TGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVE------   83 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~--------~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~------   83 (441)
                      .++|++.+.||+|+||+||+|++..        +++.||+|++...        +.+.+|+.+++.++||||++      
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~  112 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY  112 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence            4799999999999999999999987        4889999998754        25779999999999999988      


Q ss_pred             ---------EEEEEEe-CCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEE
Q 013522           84 ---------LHEVMAS-KSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLL  150 (441)
Q Consensus        84 ---------l~~~~~~-~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NIL  150 (441)
                               +++++.. ....|+||||+ |++|.+++..   +.+++..+..++.||+.||.|||++||+||||||+|||
T Consensus       113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl  191 (352)
T 2jii_A          113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF  191 (352)
T ss_dssp             TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred             cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence                     6777766 78999999999 9999999975   57999999999999999999999999999999999999


Q ss_pred             eCCCC--CeEEeecCccccccccccC-----CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCC
Q 013522          151 LDEDG--NLKVTDFGLSAFSEHLKQD-----GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQD  223 (441)
Q Consensus       151 l~~~~--~vkl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~  223 (441)
                      ++.++  .+||+|||++.........     .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGP-SRRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCC-CchhhHHHHHHHHHHHHhCCCCccc
Confidence            99998  8999999999765433211     12244579999999999987766 5899999999999999999999987


Q ss_pred             Cc--HHHHHHH---HHcCCCCCC------CCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          224 DN--IVSMYRK---IYRGDFKCP------PWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       224 ~~--~~~~~~~---i~~~~~~~~------~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      ..  ...+...   +......++      ..+++.+.+||.+||..||++|||+.++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          271 CLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             GTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             CCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            53  3222222   222222222      246899999999999999999999999976


No 231
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.5e-45  Score=367.19  Aligned_cols=246  Identities=16%  Similarity=0.241  Sum_probs=202.7

Q ss_pred             cccCCeEEeeeecccCceEEEEE-----EEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC---CCCcceEEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLA-----RNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK---HKHIVELHEV   87 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a-----~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~   87 (441)
                      +..++|++.+.||+|+||+||+|     .+..+++.||+|++....      ...+.+|+.+++.++   |+||++++++
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            44578999999999999999999     467889999999986542      356778888888887   9999999999


Q ss_pred             EEeCCEEEEEEeccCCCchHHHHh------cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCC--------
Q 013522           88 MASKSKIYFAMDLVKGGELFNKIA------KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDE--------  153 (441)
Q Consensus        88 ~~~~~~~~lv~E~~~gg~L~~~i~------~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~--------  153 (441)
                      +...+..|+||||+.||+|.+++.      .+.+++..+..++.||+.||+|||++||+||||||+|||++.        
T Consensus       136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~  215 (365)
T 3e7e_A          136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDE  215 (365)
T ss_dssp             EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC---
T ss_pred             eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccc
Confidence            999999999999999999999996      356999999999999999999999999999999999999998        


Q ss_pred             ---CCCeEEeecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHH
Q 013522          154 ---DGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMY  230 (441)
Q Consensus       154 ---~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~  230 (441)
                         ++.+||+|||+|...............+||+.|+|||++.+..| +.++|||||||++|+|++|+.||........ 
T Consensus       216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~pf~~~~~~~~-  293 (365)
T 3e7e_A          216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPW-NYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-  293 (365)
T ss_dssp             ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCB-STHHHHHHHHHHHHHHHHSSCCCEEEETTEE-
T ss_pred             ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCC-CccccHHHHHHHHHHHHhCCCccccCCCCce-
Confidence               89999999999976554444445567789999999999988876 4899999999999999999999965432100 


Q ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          231 RKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       231 ~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                         .....-...+.++.+.+++..||+.+|.+|++..+.+.+
T Consensus       294 ---~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          294 ---KPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             ---EECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred             ---eechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence               000111122457789999999999999999765555443


No 232
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-45  Score=368.12  Aligned_cols=250  Identities=24%  Similarity=0.345  Sum_probs=202.8

Q ss_pred             CeEEeeeecccCceEEEEEEEcCCC---cEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCEEE
Q 013522           20 KYELGRMLGHGTFAKVYLARNLQTG---KSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA-SKSKIY   95 (441)
Q Consensus        20 ~y~i~~~LG~G~fg~Vy~a~~~~~~---~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-~~~~~~   95 (441)
                      +|++.+.||+|+||+||+|++..++   ..||+|.+....  .....+.+.+|+.+++.++||||+++++++. ..+..|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~  167 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  167 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence            5899999999999999999976443   468999986432  3345678999999999999999999999864 456889


Q ss_pred             EEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc
Q 013522           96 FAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ  173 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~  173 (441)
                      +||||+.+|+|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus       168 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            99999999999999975  4588999999999999999999999999999999999999999999999999975432211


Q ss_pred             C--CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCHHHH
Q 013522          174 D--GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSSEAR  249 (441)
Q Consensus       174 ~--~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~  249 (441)
                      .  .......+|+.|+|||++.+..+ +.++|||||||++|+|++ |.+||.+.+.......+..+. ...|..+++.+.
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  326 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY  326 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             ccccccCCCCCcccccChHHhcCCCC-CcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence            1  11233457889999999988776 489999999999999999 788998877666666666654 345677999999


Q ss_pred             HHHHHhcCCCCCCCCCHHHHhcC
Q 013522          250 RLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       250 ~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ++|.+||..||++|||+.+++++
T Consensus       327 ~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          327 EVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999864


No 233
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.2e-45  Score=358.26  Aligned_cols=248  Identities=25%  Similarity=0.360  Sum_probs=204.5

Q ss_pred             eEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccc-cchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEEEe
Q 013522           21 YELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKV-IKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMD   99 (441)
Q Consensus        21 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv~E   99 (441)
                      |..++.||+|+||+||+|.+  +++.||+|++..... ......+.+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  110 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV  110 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE
Confidence            45568999999999999996  788999999975432 223456789999999999999999999999999999999999


Q ss_pred             ccCCCchHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC
Q 013522          100 LVKGGELFNKIAK----GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG  175 (441)
Q Consensus       100 ~~~gg~L~~~i~~----~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~  175 (441)
                      |+.|++|.+++..    ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++..........
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  190 (307)
T 2nru_A          111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV  190 (307)
T ss_dssp             CCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred             ecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence            9999999999863    458999999999999999999999999999999999999999999999999987654333222


Q ss_pred             cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH----HHHHHHHcCCC-----------CC
Q 013522          176 LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV----SMYRKIYRGDF-----------KC  240 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~----~~~~~i~~~~~-----------~~  240 (441)
                      .....+||+.|+|||++.+. + +.++|||||||++|+|++|..||......    .+...+.....           ..
T Consensus       191 ~~~~~~g~~~y~aPE~~~~~-~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (307)
T 2nru_A          191 MTSRIVGTTAYMAPEALRGE-I-TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA  268 (307)
T ss_dssp             ECSSCCSCGGGCCHHHHTTE-E-CTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCC
T ss_pred             cccccCCCcCcCChHHhcCC-C-CccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccccccc
Confidence            33456799999999998754 4 58999999999999999999999875432    22222222211           11


Q ss_pred             CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          241 PPWFSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       241 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +...++.+.++|.+||..||.+|||+.+++++
T Consensus       269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            22345678999999999999999999999864


No 234
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.6e-44  Score=383.39  Aligned_cols=251  Identities=21%  Similarity=0.324  Sum_probs=210.8

Q ss_pred             ccCCeEEee-eecccCceEEEEEEEc--CCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCE
Q 013522           17 LHGKYELGR-MLGHGTFAKVYLARNL--QTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSK   93 (441)
Q Consensus        17 ~~~~y~i~~-~LG~G~fg~Vy~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~   93 (441)
                      ..++|.+.+ .||+|+||+||+|.+.  .++..||||++....  .....+.+.+|+.+|+.++||||+++++++.+ +.
T Consensus       333 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~  409 (613)
T 2ozo_A          333 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA  409 (613)
T ss_dssp             CTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SS
T ss_pred             cccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CC
Confidence            345566666 8999999999999876  356679999997643  22346789999999999999999999999976 56


Q ss_pred             EEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           94 IYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      +|+||||+.||+|.+++..  +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       410 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             EEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             eEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            8999999999999999964  56999999999999999999999999999999999999999999999999999764322


Q ss_pred             ccC-CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCHHH
Q 013522          172 KQD-GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSSEA  248 (441)
Q Consensus       172 ~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~  248 (441)
                      ... .......+|+.|+|||++.+..+. .++|||||||+||+|++ |..||.+.+..+....+..+. ...|+.+++++
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~-~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l  568 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINFRKFS-SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPEL  568 (613)
T ss_dssp             ------------CCTTSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             CceeeeccCCCCccceeCHhhhcCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHH
Confidence            111 112233467899999999877774 89999999999999998 999999988888888887764 56778899999


Q ss_pred             HHHHHHhcCCCCCCCCCHHHHhc
Q 013522          249 RRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       249 ~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+||.+||..||++|||+.++++
T Consensus       569 ~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          569 YALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999999853


No 235
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=7.8e-45  Score=353.63  Aligned_cols=241  Identities=26%  Similarity=0.427  Sum_probs=199.5

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      -.++|++.+.||+|+||+||+|++  .++.||+|++...     ...+.+.+|+.+++.++||||+++++++.+  ..|+
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~l   76 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCL   76 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEE
T ss_pred             CHhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEE
Confidence            346899999999999999999998  5789999998643     235678899999999999999999998864  4789


Q ss_pred             EEeccCCCchHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhh---cCcEeccCCCCcEEeCCCCC-eEEeecCccccc
Q 013522           97 AMDLVKGGELFNKIAKG----RLREDVARVYFQQLISAVDFCHS---RGVYHRDLKPENLLLDEDGN-LKVTDFGLSAFS  168 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~~----~l~~~~~~~~~~qll~aL~ylH~---~gi~HrDLkp~NILl~~~~~-vkl~DFGla~~~  168 (441)
                      ||||++|++|.+++...    .++...+..++.|++.||.|||+   +||+||||||+|||++.++. +||+|||++...
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~  156 (307)
T 2eva_A           77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI  156 (307)
T ss_dssp             EEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred             EEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccc
Confidence            99999999999999863    37899999999999999999999   89999999999999998887 799999998743


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCc--HHHHHHHHHcC-CCCCCCCCC
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDN--IVSMYRKIYRG-DFKCPPWFS  245 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~--~~~~~~~i~~~-~~~~~~~~~  245 (441)
                      ..     ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||....  .......+..+ ....+..++
T Consensus       157 ~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (307)
T 2eva_A          157 QT-----HMTNNKGSAAWMAPEVFEGSNY-SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP  230 (307)
T ss_dssp             -------------CCTTSSCHHHHTCCCC-CTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCC
T ss_pred             cc-----ccccCCCCCceEChhhhCCCCC-CcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccC
Confidence            32     2234569999999999987766 489999999999999999999997542  23333334333 345567789


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      +.+.+||.+||+.||.+|||+.+++++
T Consensus       231 ~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          231 KPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            999999999999999999999999874


No 236
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=7.1e-45  Score=380.54  Aligned_cols=253  Identities=24%  Similarity=0.366  Sum_probs=218.4

Q ss_pred             CCCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           12 DRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        12 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      ..+.+..++|++.+.||+|+||+||+|.+.. +..||||++.....    ..+.+.+|+.+|+.++||||+++++++.+ 
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-  333 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-  333 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence            3455677899999999999999999999864 46799999976542    24678999999999999999999999876 


Q ss_pred             CEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                      ..+|+||||+.+|+|.+++..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       334 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI  413 (535)
T ss_dssp             SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred             ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence            678999999999999999974   46999999999999999999999999999999999999999999999999999764


Q ss_pred             cccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcC-CCCCCCCCCH
Q 013522          169 EHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRG-DFKCPPWFSS  246 (441)
Q Consensus       169 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~  246 (441)
                      ..... .......+++.|+|||++....+ +.++|||||||+||+|++ |..||.+.+..+....+..+ ..+.|..+++
T Consensus       414 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~  491 (535)
T 2h8h_A          414 EDNEY-TARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE  491 (535)
T ss_dssp             CCHHH-HTTCSTTSCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred             CCCce-ecccCCcCcccccCHHHhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence            32111 11223446788999999987776 489999999999999999 99999998888888887766 3566788999


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          247 EARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       247 ~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      .+.+||.+||+.||++|||+.+|++.
T Consensus       492 ~l~~li~~cl~~dP~~RPt~~~l~~~  517 (535)
T 2h8h_A          492 SLHDLMCQCWRKEPEERPTFEYLQAF  517 (535)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99999999999999999999999763


No 237
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.3e-45  Score=361.28  Aligned_cols=254  Identities=20%  Similarity=0.292  Sum_probs=206.0

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEE
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIY   95 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~   95 (441)
                      ...++|++.+.||+|+||+||+|++ .+|+.||+|++.......  ....+.+|+.+++.++||||+++++++.+.+..+
T Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  103 (326)
T 3uim_A           27 VASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL  103 (326)
T ss_dssp             TTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCE
T ss_pred             HHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCch--HHHHHHHHHHHHHhccCCCccceEEEEecCCceE
Confidence            4678999999999999999999985 578999999997654321  1236889999999999999999999999999999


Q ss_pred             EEEeccCCCchHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhc---CcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           96 FAMDLVKGGELFNKIAKG-----RLREDVARVYFQQLISAVDFCHSR---GVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~~-----~l~~~~~~~~~~qll~aL~ylH~~---gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      +||||+.||+|.+++...     .+++..+..++.|++.||.|||++   ||+||||||+|||++.++.+||+|||++..
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~  183 (326)
T 3uim_A          104 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL  183 (326)
T ss_dssp             EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccc
Confidence            999999999999999752     389999999999999999999999   999999999999999999999999999976


Q ss_pred             ccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCc----HHHHHHHHHcCCC-----
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDN----IVSMYRKIYRGDF-----  238 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~----~~~~~~~i~~~~~-----  238 (441)
                      .... ........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||....    ..........+..     
T Consensus       184 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (326)
T 3uim_A          184 MDYK-DTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL  261 (326)
T ss_dssp             CCSS-SSCEECCCCSCGGGCCHHHHHHSEE-CHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCS
T ss_pred             cCcc-cccccccccCCcCccCHHHhccCCC-CccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhh
Confidence            5422 2233445569999999999987766 589999999999999999999995211    0001111111110     


Q ss_pred             ----------CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcc
Q 013522          239 ----------KCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSW  274 (441)
Q Consensus       239 ----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpw  274 (441)
                                ..++..++.+.+++.+||+.||.+|||+.++++|-+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             TTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             hhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence                      111112467899999999999999999999998855


No 238
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=2.2e-44  Score=383.65  Aligned_cols=248  Identities=20%  Similarity=0.323  Sum_probs=209.6

Q ss_pred             eEE-eeeecccCceEEEEEEE--cCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEEE
Q 013522           21 YEL-GRMLGHGTFAKVYLARN--LQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        21 y~i-~~~LG~G~fg~Vy~a~~--~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      +.+ .+.||+|+||+||+|.+  ..+++.||||++..... .....+.+.+|+.+|+.++||||+++++++.+ +..++|
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv  447 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLV  447 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEE
Confidence            444 34899999999999955  45678999999976532 23456789999999999999999999999965 458899


Q ss_pred             EeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccccc-CC
Q 013522           98 MDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQ-DG  175 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~-~~  175 (441)
                      |||+.+|+|.+++.. +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|........ ..
T Consensus       448 ~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  527 (635)
T 4fl3_A          448 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  527 (635)
T ss_dssp             EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred             EEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence            999999999999976 6799999999999999999999999999999999999999999999999999986543221 11


Q ss_pred             cccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCHHHHHHHH
Q 013522          176 LLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSSEARRLIT  253 (441)
Q Consensus       176 ~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~  253 (441)
                      ......||+.|+|||++.+..+. .++|||||||++|+|++ |..||.+.+.......+..+. ...|..+++++.+||.
T Consensus       528 ~~~~~~~t~~y~APE~~~~~~~~-~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~  606 (635)
T 4fl3_A          528 AQTHGKWPVKWYAPECINYYKFS-SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN  606 (635)
T ss_dssp             -------CGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             cccCCCCceeeeChhhhcCCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence            22334578899999999887774 89999999999999998 999999999888888887764 5668889999999999


Q ss_pred             HhcCCCCCCCCCHHHHhc
Q 013522          254 KLLDPNPNSRIAISKIME  271 (441)
Q Consensus       254 ~~L~~dP~~R~t~~eil~  271 (441)
                      +||..||++|||+.++++
T Consensus       607 ~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          607 LCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHTCSSTTTSCCHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHH
Confidence            999999999999999975


No 239
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=7.6e-45  Score=356.44  Aligned_cols=255  Identities=22%  Similarity=0.367  Sum_probs=210.4

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEE----EcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEE
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLAR----NLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVM   88 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~----~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~   88 (441)
                      +.....++|++++.||+|+||+||+|+    +..+++.||+|++....   ....+.+.+|+.+++.++||||+++++++
T Consensus        35 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  111 (326)
T 2w1i_A           35 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGVC  111 (326)
T ss_dssp             --CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---SHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            445667789999999999999999999    45689999999997542   34567899999999999999999999998


Q ss_pred             EeCC--EEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCc
Q 013522           89 ASKS--KIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGL  164 (441)
Q Consensus        89 ~~~~--~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGl  164 (441)
                      ...+  .+++||||++|++|.+++..  +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus       112 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~  191 (326)
T 2w1i_A          112 YSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL  191 (326)
T ss_dssp             CC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred             EecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcc
Confidence            6543  78999999999999999976  4599999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccC-CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHH----------------
Q 013522          165 SAFSEHLKQD-GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIV----------------  227 (441)
Q Consensus       165 a~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~----------------  227 (441)
                      +......... .......+++.|+|||++.+..+ +.++|||||||++|+|++|..||......                
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (326)
T 2w1i_A          192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF-SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF  270 (326)
T ss_dssp             CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEE-EHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred             hhhccccccccccccCCCCceeEECchhhcCCCC-CchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence            9765432211 11233457888999999987766 48999999999999999999998653211                


Q ss_pred             HHHHHHHc-CCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          228 SMYRKIYR-GDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       228 ~~~~~i~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .+...+.. ...+.|+.+++++.+||.+||..||++|||+.++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          271 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            11222222 245567789999999999999999999999999975


No 240
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=6.4e-45  Score=357.74  Aligned_cols=258  Identities=19%  Similarity=0.304  Sum_probs=196.2

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHH--HHhCCCCCcceEEEEEEe-
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISV--MKMVKHKHIVELHEVMAS-   90 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~i--l~~l~hpnIv~l~~~~~~-   90 (441)
                      +.+-.++|++++.||+|+||+||+|++  +++.||+|++....      ...+..|..+  +..++||||+++++.+.. 
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~   79 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERV   79 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheeccccc
Confidence            455678999999999999999999987  78999999996543      2233344444  456899999999986542 


Q ss_pred             ----CCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc---------CcEeccCCCCcEEeCCCCCe
Q 013522           91 ----KSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSR---------GVYHRDLKPENLLLDEDGNL  157 (441)
Q Consensus        91 ----~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~---------gi~HrDLkp~NILl~~~~~v  157 (441)
                          ...+|+||||++||+|.+++.....++..+..++.||+.||.|||++         ||+||||||+|||++.++.+
T Consensus        80 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  159 (336)
T 3g2f_A           80 TADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC  159 (336)
T ss_dssp             CTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred             ccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence                33689999999999999999988889999999999999999999999         99999999999999999999


Q ss_pred             EEeecCccccccccc------cCCcccccccCCCccchhhhhccC------CCCCcccHHHHHHHHHHHhhCCCCCCCC-
Q 013522          158 KVTDFGLSAFSEHLK------QDGLLHTTCGTPAYVAPEVISKKG------YDGAKADIWSCGVILYVLLAGFLPFQDD-  224 (441)
Q Consensus       158 kl~DFGla~~~~~~~------~~~~~~~~~gt~~y~APE~l~~~~------~~~~~~DiwSlGvil~~ll~G~~Pf~~~-  224 (441)
                      ||+|||++.......      ........+||+.|+|||++.+..      ..+.++|||||||++|+|++|..||... 
T Consensus       160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~  239 (336)
T 3g2f_A          160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE  239 (336)
T ss_dssp             EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred             EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence            999999997643211      122234567999999999997621      2236799999999999999997665321 


Q ss_pred             c-----------------HHHHHHHHHc--CCCCCCCC------CCHHHHHHHHHhcCCCCCCCCCHHHHh------cCc
Q 013522          225 N-----------------IVSMYRKIYR--GDFKCPPW------FSSEARRLITKLLDPNPNSRIAISKIM------ESS  273 (441)
Q Consensus       225 ~-----------------~~~~~~~i~~--~~~~~~~~------~~~~~~~li~~~L~~dP~~R~t~~eil------~hp  273 (441)
                      .                 .......+..  ....+|..      +++++.+||.+||+.||++|||+.+++      -++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~  319 (336)
T 3g2f_A          240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI  319 (336)
T ss_dssp             CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence            1                 1111111111  12233333      334799999999999999999999994      467


Q ss_pred             ccCccC
Q 013522          274 WFKKSA  279 (441)
Q Consensus       274 wf~~~~  279 (441)
                      |-++..
T Consensus       320 ~~~~~~  325 (336)
T 3g2f_A          320 WERNKS  325 (336)
T ss_dssp             CCC---
T ss_pred             HHhccc
Confidence            766543


No 241
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=2.5e-45  Score=357.80  Aligned_cols=254  Identities=22%  Similarity=0.381  Sum_probs=211.4

Q ss_pred             CCccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           13 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        13 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      ...+..++|++++.||+|+||+||+|++..   .+|+|++...... ....+.+.+|+.+++.++||||+++++++.+..
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDN-EDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCC-CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCC-HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            345667899999999999999999999843   4999999754322 123345778999999999999999999999999


Q ss_pred             EEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccc
Q 013522           93 KIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEH  170 (441)
Q Consensus        93 ~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~  170 (441)
                      ..++||||+.|++|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~  181 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV  181 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred             ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence            99999999999999999986  3599999999999999999999999999999999999998 68999999999875432


Q ss_pred             cc---cCCcccccccCCCccchhhhhcc--------CCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCC
Q 013522          171 LK---QDGLLHTTCGTPAYVAPEVISKK--------GYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFK  239 (441)
Q Consensus       171 ~~---~~~~~~~~~gt~~y~APE~l~~~--------~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~  239 (441)
                      ..   .........||+.|+|||++.+.        ...+.++|||||||++|+|++|..||...+.......+..+..+
T Consensus       182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  261 (319)
T 2y4i_B          182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP  261 (319)
T ss_dssp             ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC
T ss_pred             ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC
Confidence            21   22334455699999999999752        22358899999999999999999999999888888877776543


Q ss_pred             C--CCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          240 C--PPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       240 ~--~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      .  +..+++++.++|.+||..||.+|||+.++++
T Consensus       262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            3  2357899999999999999999999999986


No 242
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=1.1e-44  Score=356.70  Aligned_cols=250  Identities=19%  Similarity=0.342  Sum_probs=206.5

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh--CCCCCcceEEEEEEeCC
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKM--VKHKHIVELHEVMASKS   92 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~~~   92 (441)
                      ..+.++|++.+.||+|+||+||+|++  +|+.||+|++...      ....+.+|+.+++.  ++||||+++++++....
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence            45678999999999999999999998  6899999998643      23567789999887  79999999999998776


Q ss_pred             ----EEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHh--------hcCcEeccCCCCcEEeCCCCCeEEe
Q 013522           93 ----KIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCH--------SRGVYHRDLKPENLLLDEDGNLKVT  160 (441)
Q Consensus        93 ----~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH--------~~gi~HrDLkp~NILl~~~~~vkl~  160 (441)
                          ..|+||||+.+|+|.+++....+++..+..++.|++.||.|||        ++||+||||||+|||++.++.+||+
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~  189 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA  189 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC
T ss_pred             CccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE
Confidence                8999999999999999999888999999999999999999999        8999999999999999999999999


Q ss_pred             ecCccccccccccC--CcccccccCCCccchhhhhccCCCC-----CcccHHHHHHHHHHHhhC----------CCCCCC
Q 013522          161 DFGLSAFSEHLKQD--GLLHTTCGTPAYVAPEVISKKGYDG-----AKADIWSCGVILYVLLAG----------FLPFQD  223 (441)
Q Consensus       161 DFGla~~~~~~~~~--~~~~~~~gt~~y~APE~l~~~~~~~-----~~~DiwSlGvil~~ll~G----------~~Pf~~  223 (441)
                      |||++.........  ......+||+.|+|||++.+.....     .++|||||||++|+|++|          ..||..
T Consensus       190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~  269 (342)
T 1b6c_B          190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD  269 (342)
T ss_dssp             CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence            99999754432111  0234557999999999997653221     579999999999999999          789866


Q ss_pred             C-----cHHHHHHHHHcCCC--CCCCC-----CCHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          224 D-----NIVSMYRKIYRGDF--KCPPW-----FSSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       224 ~-----~~~~~~~~i~~~~~--~~~~~-----~~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      .     ....+...+.....  ..|..     .++.+.+||.+||+.||++|||+.++++|
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          270 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             TSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            4     23444444433322  22321     23578999999999999999999999875


No 243
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=9.5e-47  Score=371.52  Aligned_cols=245  Identities=18%  Similarity=0.282  Sum_probs=200.6

Q ss_pred             cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeeccccc-----chhhHHHHHHHHHHHHhCC---------CCCc
Q 013522           16 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVI-----KVGMMEQIKREISVMKMVK---------HKHI   81 (441)
Q Consensus        16 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~---------hpnI   81 (441)
                      +..++|++++.||+|+||+||+|++  +|+.||||++......     .....+.+.+|+.+|+.++         ||||
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni   94 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF   94 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred             cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence            3457899999999999999999998  7899999999876431     2234578889999999885         8888


Q ss_pred             ceEEEEEE------------------------------eCCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHH
Q 013522           82 VELHEVMA------------------------------SKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAV  131 (441)
Q Consensus        82 v~l~~~~~------------------------------~~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL  131 (441)
                      +++++++.                              +.+.+|+||||+.+|++.+.+.++.+++..++.++.||+.||
T Consensus        95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHH
T ss_pred             hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence            88877653                              268899999999999888888778899999999999999999


Q ss_pred             HHHh-hcCcEeccCCCCcEEeCCCC--------------------CeEEeecCccccccccccCCcccccccCCCccchh
Q 013522          132 DFCH-SRGVYHRDLKPENLLLDEDG--------------------NLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPE  190 (441)
Q Consensus       132 ~ylH-~~gi~HrDLkp~NILl~~~~--------------------~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE  190 (441)
                      +||| ++||+||||||+|||++.++                    .+||+|||+|+....       ...+||+.|+|||
T Consensus       175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE  247 (336)
T 2vuw_A          175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDED  247 (336)
T ss_dssp             HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSG
T ss_pred             HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccChh
Confidence            9999 99999999999999999887                    899999999986542       2458999999999


Q ss_pred             hhhccCCCCCcccHHHHHHH-HHHHhhCCCCCCCCcH-HHHHHHHHcC-CCC--C----CCCCCHHHHHHHHHhcCCCCC
Q 013522          191 VISKKGYDGAKADIWSCGVI-LYVLLAGFLPFQDDNI-VSMYRKIYRG-DFK--C----PPWFSSEARRLITKLLDPNPN  261 (441)
Q Consensus       191 ~l~~~~~~~~~~DiwSlGvi-l~~ll~G~~Pf~~~~~-~~~~~~i~~~-~~~--~----~~~~~~~~~~li~~~L~~dP~  261 (441)
                      ++.+..  +.++||||+|++ .+++++|..||.+... ......+... ...  .    ++.+++++++||++||++|  
T Consensus       248 ~~~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d--  323 (336)
T 2vuw_A          248 LFTGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS--  323 (336)
T ss_dssp             GGCCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS--
T ss_pred             hhcCCC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC--
Confidence            998665  589999998777 7788999999955322 2233333321 111  1    1236789999999999987  


Q ss_pred             CCCCHHHHh-cCcccC
Q 013522          262 SRIAISKIM-ESSWFK  276 (441)
Q Consensus       262 ~R~t~~eil-~hpwf~  276 (441)
                         |+.++| +||||+
T Consensus       324 ---sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          324 ---SATDLLCQHSLFK  336 (336)
T ss_dssp             ---SHHHHHHHCGGGC
T ss_pred             ---CHHHHHhcCCCcC
Confidence               999999 999995


No 244
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=6e-44  Score=368.25  Aligned_cols=250  Identities=23%  Similarity=0.332  Sum_probs=208.6

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCC-CCcceEEEEEEeCCE
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKH-KHIVELHEVMASKSK   93 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h-pnIv~l~~~~~~~~~   93 (441)
                      ..+.++|++++.||+|+||+||+|++..+++.||||++......     ..+.+|+.+++.|+| ++|..+..++.....
T Consensus         3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~   77 (483)
T 3sv0_A            3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDY   77 (483)
T ss_dssp             CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTE
T ss_pred             CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCE
Confidence            35778999999999999999999999999999999998755432     357799999999977 566666677788899


Q ss_pred             EEEEEeccCCCchHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEe---CCCCCeEEeecCccccc
Q 013522           94 IYFAMDLVKGGELFNKIA--KGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLL---DEDGNLKVTDFGLSAFS  168 (441)
Q Consensus        94 ~~lv~E~~~gg~L~~~i~--~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl---~~~~~vkl~DFGla~~~  168 (441)
                      .|+||||+ |++|.+++.  .+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus        78 ~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A           78 NVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence            99999999 899999997  4679999999999999999999999999999999999999   68899999999999865


Q ss_pred             cccccC-----CcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCc---HHHHHHHHHcCCC--
Q 013522          169 EHLKQD-----GLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDN---IVSMYRKIYRGDF--  238 (441)
Q Consensus       169 ~~~~~~-----~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~---~~~~~~~i~~~~~--  238 (441)
                      ......     ......+||+.|+|||++.+..+ +.++|||||||+||+|++|..||.+..   ....+.++.....  
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (483)
T 3sv0_A          157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVAT  235 (483)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHS
T ss_pred             cCCccccccccccccccCCCccccCHHHhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccc
Confidence            432221     12236789999999999988776 489999999999999999999998743   3333443332221  


Q ss_pred             ---CCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          239 ---KCPPWFSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       239 ---~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                         .++..+++++.+||.+||..||++||++.+|++
T Consensus       236 ~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence               223567899999999999999999999998754


No 245
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=3.6e-45  Score=370.89  Aligned_cols=247  Identities=19%  Similarity=0.240  Sum_probs=195.5

Q ss_pred             CeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCC-CCcc----------------
Q 013522           20 KYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKH-KHIV----------------   82 (441)
Q Consensus        20 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h-pnIv----------------   82 (441)
                      .|++++.||+|+||+||+|++..+|+.||||++...........+.+++|+.+++.++| +|..                
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  158 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  158 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence            48899999999999999999999999999999875443333346789999999999987 2211                


Q ss_pred             -----eEEEEEEe-----CCEEEEEEeccCCCchHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccC
Q 013522           83 -----ELHEVMAS-----KSKIYFAMDLVKGGELFNKIA--------KGRLREDVARVYFQQLISAVDFCHSRGVYHRDL  144 (441)
Q Consensus        83 -----~l~~~~~~-----~~~~~lv~E~~~gg~L~~~i~--------~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDL  144 (441)
                           .+..++..     ...++++|+++ +++|.+++.        .+.+++..+..++.||+.||+|||++||+||||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence                 11121221     22467778876 579998885        234778888999999999999999999999999


Q ss_pred             CCCcEEeCCCCCeEEeecCccccccccccCCcccccccCCCccchhhhh----------ccCCCCCcccHHHHHHHHHHH
Q 013522          145 KPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVIS----------KKGYDGAKADIWSCGVILYVL  214 (441)
Q Consensus       145 kp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~----------~~~~~~~~~DiwSlGvil~~l  214 (441)
                      ||+|||++.++.+||+|||+++.....     ..+.+| +.|+|||++.          +..+ +.++|||||||++|+|
T Consensus       238 Kp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~-~~~~DvwSlGvil~el  310 (413)
T 3dzo_A          238 RPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLM-TFAFDTWTLGLAIYWI  310 (413)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEE-CHHHHHHHHHHHHHHH
T ss_pred             ccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCC-CchhhHHHHHHHHHHH
Confidence            999999999999999999998754332     456788 9999999994          2233 4799999999999999


Q ss_pred             hhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCcc
Q 013522          215 LAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKS  278 (441)
Q Consensus       215 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  278 (441)
                      ++|+.||...+.......+..    ....+++++.+||.+||+.||++|||+.++++||||+..
T Consensus       311 ltg~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          311 WCADLPNTDDAALGGSEWIFR----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             HHSSCCCCTTGGGSCSGGGGS----SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHCCCCCCCcchhhhHHHHHh----hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence            999999988766544443333    223578999999999999999999999999999999753


No 246
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=9.9e-44  Score=379.92  Aligned_cols=252  Identities=25%  Similarity=0.399  Sum_probs=214.3

Q ss_pred             ccccCCeEEeeeecccCceEEEEEEEcCC---CcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           15 TLLHGKYELGRMLGHGTFAKVYLARNLQT---GKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        15 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~---~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      .+..++|++++.||+|+||+||+|.+..+   +..||+|.+....  .....+.+.+|+.+++.++||||+++++++. .
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~  462 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E  462 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence            35567899999999999999999998654   4579999886432  3345578999999999999999999999985 4


Q ss_pred             CEEEEEEeccCCCchHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAK--GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSE  169 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~  169 (441)
                      +..|+||||+.||+|.+++..  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~  542 (656)
T 2j0j_A          463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  542 (656)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred             CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence            668999999999999999975  368999999999999999999999999999999999999999999999999997643


Q ss_pred             ccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCCCHH
Q 013522          170 HLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLA-GFLPFQDDNIVSMYRKIYRGD-FKCPPWFSSE  247 (441)
Q Consensus       170 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~-G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~  247 (441)
                      ... ........||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..+. .+.|+.+++.
T Consensus       543 ~~~-~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  620 (656)
T 2j0j_A          543 DST-YYKASKGKLPIKWMAPESINFRRF-TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT  620 (656)
T ss_dssp             C-----------CCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHH
T ss_pred             CCc-ceeccCCCCCcceeCHHHhcCCCC-CchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHH
Confidence            321 112234457889999999987776 489999999999999997 999999988888888877654 5678889999


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          248 ARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       248 ~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                      +.+||.+||..||.+|||+.++++
T Consensus       621 l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          621 LYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999999975


No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=1.2e-45  Score=390.72  Aligned_cols=258  Identities=26%  Similarity=0.417  Sum_probs=206.7

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEe---
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMAS---   90 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~---   90 (441)
                      +....++|++.+.||+|+||+||+|.+..+|+.||+|++....  .....+.+.+|+.+++.++||||+++++++..   
T Consensus         9 pg~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~   86 (676)
T 3qa8_A            9 PTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK   86 (676)
T ss_dssp             --------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCC
T ss_pred             CCCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccc
Confidence            3455699999999999999999999999999999999986542  33456788999999999999999999999755   


Q ss_pred             ---CCEEEEEEeccCCCchHHHHhc-C---CCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC---eEEe
Q 013522           91 ---KSKIYFAMDLVKGGELFNKIAK-G---RLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN---LKVT  160 (441)
Q Consensus        91 ---~~~~~lv~E~~~gg~L~~~i~~-~---~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~---vkl~  160 (441)
                         .+..|+||||+.||+|.+++.. +   .+++..++.++.|++.||+|||++||+||||||+|||++.++.   +||+
T Consensus        87 ~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~  166 (676)
T 3qa8_A           87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKII  166 (676)
T ss_dssp             CCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred             ccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEc
Confidence               6778999999999999999976 2   5899999999999999999999999999999999999997775   9999


Q ss_pred             ecCccccccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHH---------
Q 013522          161 DFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYR---------  231 (441)
Q Consensus       161 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~---------  231 (441)
                      |||++.....   .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||........+.         
T Consensus       167 DFG~a~~~~~---~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~  242 (676)
T 3qa8_A          167 DLGYAKELDQ---GELCTEFVGTLQYLAPELLEQKKY-TVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNE  242 (676)
T ss_dssp             SCCCCCBTTS---CCCCCCCCSCCTTCSSCSSCCSCC-STTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-----
T ss_pred             cccccccccc---ccccccccCCcccCChHHhccCCC-CchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccch
Confidence            9999976432   233456789999999999987776 489999999999999999999997653322110         


Q ss_pred             H-----HHcCCC------CCC----CCCCHHHHHHHHHhcCCCCCCCCCHHHHhcCcccCc
Q 013522          232 K-----IYRGDF------KCP----PWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKK  277 (441)
Q Consensus       232 ~-----i~~~~~------~~~----~~~~~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  277 (441)
                      .     ...+..      +.|    +.+++.+.+||.+||.+||++|||+.++++||||+.
T Consensus       243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            0     011111      111    225678999999999999999999999999999964


No 248
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=6.4e-46  Score=358.89  Aligned_cols=247  Identities=19%  Similarity=0.339  Sum_probs=186.9

Q ss_pred             ccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHh--CCCCCcceEEEEEEeCC--
Q 013522           17 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKM--VKHKHIVELHEVMASKS--   92 (441)
Q Consensus        17 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~~~--   92 (441)
                      +.++|++.+.||+|+||+||+|++  +|+.||+|++....      ...+.+|..++..  ++||||+++++++....  
T Consensus         1 i~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~   72 (303)
T 3gxj_A            1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGT   72 (303)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-TT------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSS
T ss_pred             CcceeeehhhccCCCCeEEEEEEE--cCcceEEEEecccc------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCc
Confidence            457899999999999999999987  58999999986432      3466778888887  79999999999998776  


Q ss_pred             --EEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHh--------hcCcEeccCCCCcEEeCCCCCeEEeec
Q 013522           93 --KIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCH--------SRGVYHRDLKPENLLLDEDGNLKVTDF  162 (441)
Q Consensus        93 --~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH--------~~gi~HrDLkp~NILl~~~~~vkl~DF  162 (441)
                        .+|+||||+.+|+|.+++....+++..+..++.|++.||.|||        ++||+||||||+|||++.++.+||+||
T Consensus        73 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DF  152 (303)
T 3gxj_A           73 WTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  152 (303)
T ss_dssp             SEEEEEEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred             cceeEEEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeec
Confidence              8999999999999999999888999999999999999999999        999999999999999999999999999


Q ss_pred             CccccccccccC--CcccccccCCCccchhhhhccCCCC-----CcccHHHHHHHHHHHhhC----------CCCCCCCc
Q 013522          163 GLSAFSEHLKQD--GLLHTTCGTPAYVAPEVISKKGYDG-----AKADIWSCGVILYVLLAG----------FLPFQDDN  225 (441)
Q Consensus       163 Gla~~~~~~~~~--~~~~~~~gt~~y~APE~l~~~~~~~-----~~~DiwSlGvil~~ll~G----------~~Pf~~~~  225 (441)
                      |++.........  ......+||+.|+|||++.+.....     .++|||||||++|+|++|          ..||....
T Consensus       153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~  232 (303)
T 3gxj_A          153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  232 (303)
T ss_dssp             CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred             CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence            999754332211  1223457999999999997653322     579999999999999999          77875432


Q ss_pred             -----HHHHHHHHHcCC--CCCCCC-----CCHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 013522          226 -----IVSMYRKIYRGD--FKCPPW-----FSSEARRLITKLLDPNPNSRIAISKIME  271 (441)
Q Consensus       226 -----~~~~~~~i~~~~--~~~~~~-----~~~~~~~li~~~L~~dP~~R~t~~eil~  271 (441)
                           .......+....  ...|..     .++.+.+||.+||+.||.+|||+.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          233 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             C-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             CCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence                 122333333222  222321     2347899999999999999999999986


No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=7.6e-44  Score=343.59  Aligned_cols=228  Identities=15%  Similarity=0.197  Sum_probs=193.9

Q ss_pred             CCc-cccCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 013522           13 RPT-LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASK   91 (441)
Q Consensus        13 ~~~-~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~   91 (441)
                      .+. ++.++|++.+.||+|+||+||+|++..+++.||+|++.............+.+|+.+++.++||||+++++++.+.
T Consensus        24 ~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~  103 (286)
T 3uqc_A           24 PGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR  103 (286)
T ss_dssp             TTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             CCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC
Confidence            344 7889999999999999999999999999999999999876555455667899999999999999999999999999


Q ss_pred             CEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccccccc
Q 013522           92 SKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHL  171 (441)
Q Consensus        92 ~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~  171 (441)
                      +..|+||||+.|++|.+++..+. ...++..++.||+.||.|||++||+||||||+|||++.+|.+||+++|.       
T Consensus       104 ~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~-------  175 (286)
T 3uqc_A          104 AGGLVVAEWIRGGSLQEVADTSP-SPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT-------  175 (286)
T ss_dssp             TEEEEEEECCCEEEHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC-------
T ss_pred             CcEEEEEEecCCCCHHHHHhcCC-ChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc-------
Confidence            99999999999999999997764 5667889999999999999999999999999999999999999985542       


Q ss_pred             ccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHH---HHHcCCCC----CCCCC
Q 013522          172 KQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYR---KIYRGDFK----CPPWF  244 (441)
Q Consensus       172 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~---~i~~~~~~----~~~~~  244 (441)
                                     ++|        .+.++|||||||++|+|++|+.||.+.+......   +...+...    .++.+
T Consensus       176 ---------------~~~--------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T 3uqc_A          176 ---------------MPD--------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDI  232 (286)
T ss_dssp             ---------------CTT--------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTS
T ss_pred             ---------------cCC--------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCC
Confidence                           332        3588999999999999999999998765432110   11112111    23568


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCHHHHhcC
Q 013522          245 SSEARRLITKLLDPNPNSRIAISKIMES  272 (441)
Q Consensus       245 ~~~~~~li~~~L~~dP~~R~t~~eil~h  272 (441)
                      ++++.+||.+||+.||.+| |+.++++.
T Consensus       233 ~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          233 PFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             CHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             CHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence            9999999999999999999 99999863


No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.1e-43  Score=381.96  Aligned_cols=243  Identities=23%  Similarity=0.376  Sum_probs=203.4

Q ss_pred             CccccCCeEEeeeecccCceEEEEEEEcC-CCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 013522           14 PTLLHGKYELGRMLGHGTFAKVYLARNLQ-TGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMASKS   92 (441)
Q Consensus        14 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~   92 (441)
                      +.++.++|++.+.||+|+||+||+|.+.. +|+.||||++....  .......+.+|+.+++.++||||+++++++...+
T Consensus        75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  152 (681)
T 2pzi_A           75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTD  152 (681)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEEC
T ss_pred             CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecC
Confidence            45678999999999999999999999976 78999999986532  2344567889999999999999999999998765


Q ss_pred             E-----EEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522           93 K-----IYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus        93 ~-----~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      .     .|+||||+.|++|.+.+.. .+++..+..++.||+.||.|||++||+||||||+|||++.+ .+||+|||++..
T Consensus       153 ~~~~~~~~lv~E~~~g~~L~~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          153 RHGDPVGYIVMEYVGGQSLKRSKGQ-KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             TTSCEEEEEEEECCCCEECC----C-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CCCCceeEEEEEeCCCCcHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchh
Confidence            5     7999999999999988766 79999999999999999999999999999999999999875 999999999875


Q ss_pred             ccccccCCcccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCC--CCCCC
Q 013522          168 SEHLKQDGLLHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKC--PPWFS  245 (441)
Q Consensus       168 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~  245 (441)
                      ...      ....+||+.|+|||++.+. + +.++|||||||++|+|++|..||.+.....        ....  ....+
T Consensus       231 ~~~------~~~~~gt~~y~aPE~~~~~-~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------~~~~~~~~~~~  294 (681)
T 2pzi_A          231 INS------FGYLYGTPGFQAPEIVRTG-P-TVATDIYTVGRTLAALTLDLPTRNGRYVDG--------LPEDDPVLKTY  294 (681)
T ss_dssp             TTC------CSCCCCCTTTSCTTHHHHC-S-CHHHHHHHHHHHHHHHHSCCCEETTEECSS--------CCTTCHHHHHC
T ss_pred             ccc------CCccCCCccccCHHHHcCC-C-CCceehhhhHHHHHHHHhCCCCCccccccc--------ccccccccccC
Confidence            432      1456799999999999765 3 689999999999999999999987632110        0000  01136


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcCcccC
Q 013522          246 SEARRLITKLLDPNPNSRIAISKIMESSWFK  276 (441)
Q Consensus       246 ~~~~~li~~~L~~dP~~R~t~~eil~hpwf~  276 (441)
                      +.+.+||.+||++||.+||+..+.+.|+|+.
T Consensus       295 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          295 DSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            7899999999999999999999999999874


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=100.00  E-value=1.2e-36  Score=319.65  Aligned_cols=230  Identities=12%  Similarity=0.111  Sum_probs=160.5

Q ss_pred             eecccCceEEEEEEEcCCCcEEEEEEeeccccc-------chhhHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCEEEEE
Q 013522           26 MLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVI-------KVGMMEQIKREISVMKMV-KHKHIVELHEVMASKSKIYFA   97 (441)
Q Consensus        26 ~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-------~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~lv   97 (441)
                      .++.|++|.+..++....|+.+|+|++.+....       .....+.+.+|+++|+++ .|+||+++++++++.+..|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            467788888888888889999999999875432       123456799999999999 799999999999999999999


Q ss_pred             EeccCCCchHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCc
Q 013522           98 MDLVKGGELFNKIAK-GRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGL  176 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~-~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~  176 (441)
                      ||||+|++|.++|.+ +++++.   .++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....  ....
T Consensus       321 MEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~--~~~~  395 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ--DCSW  395 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-----CC
T ss_pred             EecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCC--CCcc
Confidence            999999999999987 667654   5899999999999999999999999999999999999999999975443  2234


Q ss_pred             ccccccCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 013522          177 LHTTCGTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLL  256 (441)
Q Consensus       177 ~~~~~gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L  256 (441)
                      ..+.+||+.|+|||++.+..  ..++|+||+|++++.+.++..|+        ...+...    |.. ...+..+...++
T Consensus       396 ~~t~vGTp~YmAPE~l~g~~--~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~~~----~~~-~~~~~~l~~~l~  460 (569)
T 4azs_A          396 PTNLVQSFFVFVNELFAENK--SWNGFWRSAPVHPFNLPQPWSNW--------LYAVWQE----PVE-RWNFVLLLALFE  460 (569)
T ss_dssp             SHHHHHHHHHHHHHHC-------------------CCCCTTHHHH--------HHHHHTS----CGG-GCSHHHHHHHHH
T ss_pred             ccCceechhhccHHHhCCCC--CCcccccccccchhhhccccchh--------HHHhhcC----CCC-CCcHHHHHHHHh
Confidence            56789999999999997643  36799999999999887764443        1111111    110 112456677777


Q ss_pred             CCCCCCCCCHHHHhcCccc
Q 013522          257 DPNPNSRIAISKIMESSWF  275 (441)
Q Consensus       257 ~~dP~~R~t~~eil~hpwf  275 (441)
                      ..+|..|+.......++|.
T Consensus       461 ~~~~~~~~~~~~~~~~~~~  479 (569)
T 4azs_A          461 KKAKLPSAEQQRGATEQWI  479 (569)
T ss_dssp             TGGGSCCGGGSSCCHHHHH
T ss_pred             CCCCCCCCChhhhccchhH
Confidence            7888888777666666665


No 252
>2ehb_D CBL-interacting serine/threonine-protein kinase 2; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana}
Probab=100.00  E-value=1.8e-34  Score=244.87  Aligned_cols=131  Identities=37%  Similarity=0.700  Sum_probs=116.5

Q ss_pred             CccccchhhhhccCCCCCCChhhHHhhHHHhhhhcccccCCchhhHHHHHHHHHHcCcEEEeecCeEEEEeeecCCccce
Q 013522          299 QPETLNAFHIISLSEGFDLSPLFEEKKRAEREELRFATTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKL  378 (441)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  378 (441)
                      .|..+|||++|++|+|+|||+||+......++++||+|+.|++.++++|+++|+.++|+|+++++++++++..+|+||.|
T Consensus         3 ~p~~lNAFdiIs~S~g~dLSgLFe~~~~~~~r~tRF~s~~~a~~ii~klEe~a~~lg~~V~kk~~~vkl~~~~~grkG~l   82 (143)
T 2ehb_D            3 GPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRNFKTRLEGLSSIKAGQL   82 (143)
T ss_dssp             CCEECCHHHHHTTCTTTCGGGGGCSCCCSCCCCCEEEECSCHHHHHHHHHHHHHHTTEEEEESSSEEEEEECCSSGGGCC
T ss_pred             CccccCHHHHHHHCcCCCchhhhccccccccccceEEeCCCHHHHHHHHHHHHHhcCcEEEEcCcEEEEEEecCCCcceE
Confidence            46789999999999999999999765432356799999999999999999999999999999888999999999999999


Q ss_pred             EEEEEEEEecCceEEEEEEccCCChhhhHHHhhhhhhhhhccceeccccccc
Q 013522          379 AINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNP  430 (441)
Q Consensus       379 ~~~~~i~~~~~~~~~v~~~~~~Gd~le~~~~~~~~l~~~l~div~~~~~~~~  430 (441)
                      ++.+|||+|+|+++||||+|++||++||++||. +||++|+||||+|+++..
T Consensus        83 ~v~~EVfevapsl~vVEvrks~GD~lEy~k~~~-~Lr~~L~diV~~~~~~~~  133 (143)
T 2ehb_D           83 AVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYK-KLCSKLENIIWRATEGIP  133 (143)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEESCHHHHHHHHH-HHHHHSTTTBCC------
T ss_pred             EEEEEEEEecCCEEEEEEEecCCChHHHHHHHH-HHHHHhhcceecCCCCCc
Confidence            999999999999999999999999999999765 899999999999999764


No 253
>2zfd_B Putative uncharacterized protein T20L15_90; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana}
Probab=99.97  E-value=2.3e-32  Score=226.34  Aligned_cols=122  Identities=30%  Similarity=0.474  Sum_probs=107.9

Q ss_pred             CccccchhhhhccCCCCCCChhhHHhhHHHhhhhcccccCCchhhHHHHHHHHHHcCcEEEeecCeEEEEeeecCCccce
Q 013522          299 QPETLNAFHIISLSEGFDLSPLFEEKKRAEREELRFATTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKL  378 (441)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  378 (441)
                      .|..+|||++|++|+|+|||+||++..+ .++++||+|+.||+.++++|+++|+.++|+|++++++   ++..+|+||.|
T Consensus         2 ~~~~lNAFdiIs~S~g~dLSgLFe~~~~-~~r~tRF~S~~~a~~ii~klEe~a~~lg~~v~kk~~~---~~~~~g~kG~l   77 (123)
T 2zfd_B            2 GARRMNAFDIISGSPGFNLSGLFGDARK-YDRVERFVSAWTAERVVERLEEIVSAENLTVAKKETW---GMKIEGQKGNF   77 (123)
T ss_dssp             --CCCCHHHHHHTSTTSSSGGGGGGGCS-SCCCEEEEESSCHHHHHHHHHHHHHHTTCEEEEEETT---EEEEEEGGGTE
T ss_pred             CcccccHHHHHHHCcCCCchHhcCcccc-cccceEEEeCCCHHHHHHHHHHHHHHCCCEEEEcCCc---cccccCCCccE
Confidence            3567999999999999999999976432 3568999999999999999999999999999988875   77788999999


Q ss_pred             EEEEEEEEecCceEEEEEEccCCChhhhHHHhhhhhhhhhccceec
Q 013522          379 AINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWM  424 (441)
Q Consensus       379 ~~~~~i~~~~~~~~~v~~~~~~Gd~le~~~~~~~~l~~~l~div~~  424 (441)
                      ++.+|||||+|+++||||+|++||++||++||+++||++|+||||+
T Consensus        78 ~v~~EVfev~p~l~vVEvrks~GD~lEy~~~~~~~L~~~L~diV~~  123 (123)
T 2zfd_B           78 AMVVEINQLTDELVMIEVRKRQRAAASGRDLWTDTLRPFFVELVHE  123 (123)
T ss_dssp             EEEEEEEECSSSCEEEEEEEEESCC---CCHHHHTHHHHHHHTBC-
T ss_pred             EEEEEEEEecCCEEEEEEEecCCChHHHHHHHHHHHHHHHhhhhcC
Confidence            9999999999999999999999999999999988999999999985


No 254
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.96  E-value=4.3e-30  Score=268.43  Aligned_cols=189  Identities=18%  Similarity=0.170  Sum_probs=146.0

Q ss_pred             EEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchh-----hHHHHHHHHHHHHhCCCCCcceEEEEEEeCCEEEE
Q 013522           22 ELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVG-----MMEQIKREISVMKMVKHKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        22 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~-----~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~l   96 (441)
                      ...+.||+|+||+||+|..  .++.+++|...........     ..+++.+|+.+|++++||||+++..++...+..|+
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            3457899999999999954  6789999987654332211     24568999999999999999955555556777799


Q ss_pred             EEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCC-
Q 013522           97 AMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDG-  175 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~-  175 (441)
                      ||||++|++|.+++..       +..++.|++.||.|||++||+||||||+|||++.  .+||+|||+|+......... 
T Consensus       417 VmE~~~ggsL~~~l~~-------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~  487 (540)
T 3en9_A          417 MMSYINGKLAKDVIED-------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV  487 (540)
T ss_dssp             EEECCCSEEHHHHSTT-------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred             EEECCCCCCHHHHHHH-------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence            9999999999999876       6789999999999999999999999999999998  99999999998654322111 


Q ss_pred             ----cccccccCCCccchhhhhc--cCCCCCcccHHHHHHHHHHHhhCCCCCC
Q 013522          176 ----LLHTTCGTPAYVAPEVISK--KGYDGAKADIWSCGVILYVLLAGFLPFQ  222 (441)
Q Consensus       176 ----~~~~~~gt~~y~APE~l~~--~~~~~~~~DiwSlGvil~~ll~G~~Pf~  222 (441)
                          ...+.+||+.|+|||++..  .+|. ..+|+||..+-..+-+.++.+|.
T Consensus       488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~-~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          488 DLIVFKKAVLSTHHEKFDEIWERFLEGYK-SVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHHCGGGHHHHHHHHHHHHH-HHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             chhhhhhhhcCCCCcCCHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHhccccC
Confidence                2346789999999999976  5564 67899999988888777766653


No 255
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.94  E-value=7e-27  Score=224.48  Aligned_cols=148  Identities=16%  Similarity=0.241  Sum_probs=118.5

Q ss_pred             CeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccch---------------hhHHHHHHHHHHHHhCCCCCcceE
Q 013522           20 KYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKV---------------GMMEQIKREISVMKMVKHKHIVEL   84 (441)
Q Consensus        20 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~---------------~~~~~~~~Ei~il~~l~hpnIv~l   84 (441)
                      .|++++.||+|+||.||+|.+ .+|+.||+|++........               .....+.+|+.+|+.++|   +++
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v  166 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAV  166 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSS
T ss_pred             EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCc
Confidence            355669999999999999999 8899999999965332110               134678899999999994   445


Q ss_pred             EEEEEeCCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCCeEEeecCc
Q 013522           85 HEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGL  164 (441)
Q Consensus        85 ~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~vkl~DFGl  164 (441)
                      ++++.. +..|+||||++|++|.+ +..     .....++.|++.||.|||++||+||||||+|||++ ++.+||+|||+
T Consensus       167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~  238 (282)
T 1zar_A          167 PKVYAW-EGNAVLMELIDAKELYR-VRV-----ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQ  238 (282)
T ss_dssp             CCEEEE-ETTEEEEECCCCEEGGG-CCC-----SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTT
T ss_pred             CeEEec-cceEEEEEecCCCcHHH-cch-----hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCC
Confidence            554433 45699999999999988 422     23557999999999999999999999999999999 99999999999


Q ss_pred             cccccccccCCcccccccCCCccchhhhhc
Q 013522          165 SAFSEHLKQDGLLHTTCGTPAYVAPEVISK  194 (441)
Q Consensus       165 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~  194 (441)
                      |.               .+..|.|||.+.+
T Consensus       239 a~---------------~~~~~~a~e~l~r  253 (282)
T 1zar_A          239 SV---------------EVGEEGWREILER  253 (282)
T ss_dssp             CE---------------ETTSTTHHHHHHH
T ss_pred             Ce---------------ECCCCCHHHHHHH
Confidence            86               3556899998853


No 256
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.88  E-value=8.5e-23  Score=193.39  Aligned_cols=139  Identities=18%  Similarity=0.222  Sum_probs=109.5

Q ss_pred             eEEeeeecccCceEEEEEEEcCCCcE--EEEEEeecccccc---------------------hhhHHHHHHHHHHHHhCC
Q 013522           21 YELGRMLGHGTFAKVYLARNLQTGKS--MAMKVVGKDKVIK---------------------VGMMEQIKREISVMKMVK   77 (441)
Q Consensus        21 y~i~~~LG~G~fg~Vy~a~~~~~~~~--vAiK~i~~~~~~~---------------------~~~~~~~~~Ei~il~~l~   77 (441)
                      |++.+.||+|+||.||+|.+..+|+.  ||||++.......                     ......+.+|+.+|+.+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999998788999  9999975432110                     011236889999999998


Q ss_pred             CCCc--ceEEEEEEeCCEEEEEEeccCC-C----chHHHHhcCCCCHHHHHHHHHHHHHHHHHHh-hcCcEeccCCCCcE
Q 013522           78 HKHI--VELHEVMASKSKIYFAMDLVKG-G----ELFNKIAKGRLREDVARVYFQQLISAVDFCH-SRGVYHRDLKPENL  149 (441)
Q Consensus        78 hpnI--v~l~~~~~~~~~~~lv~E~~~g-g----~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH-~~gi~HrDLkp~NI  149 (441)
                      |++|  ..+++.    ...++||||+.+ |    +|.+....  .++..+..++.|++.||.||| ++||+||||||+||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NI  202 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNI  202 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSE
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHE
Confidence            8764  444443    246899999942 3    56655432  335578899999999999999 99999999999999


Q ss_pred             EeCCCCCeEEeecCcccc
Q 013522          150 LLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus       150 Ll~~~~~vkl~DFGla~~  167 (441)
                      |++.  .++|+|||+|..
T Consensus       203 Ll~~--~~~liDFG~a~~  218 (258)
T 1zth_A          203 MYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             EESS--SEEECCCTTCEE
T ss_pred             EEcC--cEEEEECccccc
Confidence            9988  999999999864


No 257
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.80  E-value=1.1e-20  Score=187.39  Aligned_cols=138  Identities=17%  Similarity=0.250  Sum_probs=102.2

Q ss_pred             eEEeeeecccCceEEEEEEEcCCCcEEEEEEeeccccc-----------chhhH--------HHHHHHHHHHHhCCCCCc
Q 013522           21 YELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVI-----------KVGMM--------EQIKREISVMKMVKHKHI   81 (441)
Q Consensus        21 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-----------~~~~~--------~~~~~Ei~il~~l~hpnI   81 (441)
                      |+++..||.|+||.||+|.+ .+|+.||||+++.....           .....        -...+|...|.++.++++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999997 57999999998643211           00000        112457777777765554


Q ss_pred             ceEEEEEEeCCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCCC-----
Q 013522           82 VELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGN-----  156 (441)
Q Consensus        82 v~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~~-----  156 (441)
                      .-..-+....  .++||||+.|++|.....     ...+..++.||+.+|.|||++||+||||||.|||++++|.     
T Consensus       176 ~vp~p~~~~~--~~LVME~i~G~~L~~l~~-----~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~  248 (397)
T 4gyi_A          176 PVPEPIAQSR--HTIVMSLVDALPMRQVSS-----VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPS  248 (397)
T ss_dssp             SCCCEEEEET--TEEEEECCSCEEGGGCCC-----CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTT
T ss_pred             CCCeeeeccC--ceEEEEecCCccHhhhcc-----cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCccccc
Confidence            3221111222  379999999988876532     2345678999999999999999999999999999988773     


Q ss_pred             -----eEEeecCccc
Q 013522          157 -----LKVTDFGLSA  166 (441)
Q Consensus       157 -----vkl~DFGla~  166 (441)
                           +.|+||+.+.
T Consensus       249 ~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          249 SITLTPIIIXFPQMV  263 (397)
T ss_dssp             SEEEEEEECCCTTCE
T ss_pred             ccccceEEEEeCCcc
Confidence                 8999999775


No 258
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.48  E-value=1.7e-13  Score=129.12  Aligned_cols=140  Identities=16%  Similarity=0.132  Sum_probs=113.9

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCEEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-HKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~l   96 (441)
                      .+.|++...+|.|+++.||++..  .++.+++|+.......   ....+.+|+.+++.+. +..+.+++++..+.+..|+
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             hccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            46799999999999999999985  4689999998643211   1235889999999984 6788899999999999999


Q ss_pred             EEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh----------------------------------------
Q 013522           97 AMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHS----------------------------------------  136 (441)
Q Consensus        97 v~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~----------------------------------------  136 (441)
                      ||||++|.+|.+...    +......++.++..+|+.||+                                        
T Consensus        88 v~e~i~G~~l~~~~~----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP  163 (263)
T ss_dssp             EEECCSSEEHHHHCC----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred             EEEecCCeehhhccC----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence            999999999877632    222345788899999999998                                        


Q ss_pred             -------------------cCcEeccCCCCcEEeCCCCCeEEeecCccc
Q 013522          137 -------------------RGVYHRDLKPENLLLDEDGNLKVTDFGLSA  166 (441)
Q Consensus       137 -------------------~gi~HrDLkp~NILl~~~~~vkl~DFGla~  166 (441)
                                         .+++|+|++|.||++++++.+.|+||+.+.
T Consensus       164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                               458999999999999876556799999875


No 259
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.35  E-value=1.9e-12  Score=121.16  Aligned_cols=135  Identities=14%  Similarity=0.145  Sum_probs=103.0

Q ss_pred             cCCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCC--cceEEEEEEeCCEEE
Q 013522           18 HGKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKH--IVELHEVMASKSKIY   95 (441)
Q Consensus        18 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~~~~~~~~~~~   95 (441)
                      ...|.+....+.|+.+.||++.. .+|..+++|+.....      ...+.+|+.+++.+.+.+  +.+++.+..+.+..|
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~   91 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW   91 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred             cCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCE
Confidence            45677766555777799999964 567889999975431      235778999999885444  566899888888899


Q ss_pred             EEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 013522           96 FAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRG-------------------------------------  138 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~g-------------------------------------  138 (441)
                      +||||++|.+|.  ..  ...   ...++.++...|..||+..                                     
T Consensus        92 ~v~e~i~G~~l~--~~--~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (264)
T 1nd4_A           92 LLLGEVPGQDLL--SS--HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG  164 (264)
T ss_dssp             EEEECCSSEETT--TS--CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred             EEEEecCCcccC--cC--cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence            999999998884  21  122   2356778888888888743                                     


Q ss_pred             ---------------------cEeccCCCCcEEeCCCCCeEEeecCccc
Q 013522          139 ---------------------VYHRDLKPENLLLDEDGNLKVTDFGLSA  166 (441)
Q Consensus       139 ---------------------i~HrDLkp~NILl~~~~~vkl~DFGla~  166 (441)
                                           ++|+|++|.||++++++.+.|+|||.+.
T Consensus       165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                 9999999999999877667799999875


No 260
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.27  E-value=1.1e-11  Score=122.35  Aligned_cols=140  Identities=17%  Similarity=0.333  Sum_probs=107.0

Q ss_pred             EeeeecccCceEEEEEEEcCCCcEEEEEEee--cccccchhhHHHHHHHHHHHHhCC--CCCcceEEEEEEeC---CEEE
Q 013522           23 LGRMLGHGTFAKVYLARNLQTGKSMAMKVVG--KDKVIKVGMMEQIKREISVMKMVK--HKHIVELHEVMASK---SKIY   95 (441)
Q Consensus        23 i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~--~~~~~~~~~~~~~~~Ei~il~~l~--hpnIv~l~~~~~~~---~~~~   95 (441)
                      -.+.|+.|.++.||++..  .+..+++|+..  .....  .....+.+|+.+++.|.  +..+.+++.++.+.   +..|
T Consensus        42 ~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~  117 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF  117 (359)
T ss_dssp             EEEECCC-CCSCEEEEEC--SSCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred             eEEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence            457799999999999986  34678888775  32211  12356889999999997  45688899988776   4589


Q ss_pred             EEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh---------------------------------------
Q 013522           96 FAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHS---------------------------------------  136 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~---------------------------------------  136 (441)
                      +||||++|..+.+... ..++......++.+++..|+.||+                                       
T Consensus       118 ~vme~v~G~~l~~~~~-~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (359)
T 3dxp_A          118 YIMEFVSGRVLWDQSL-PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA  196 (359)
T ss_dssp             EEEECCCCBCCCCTTC-TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred             EEEEecCCeecCCCcc-ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence            9999999987754322 237788889999999999999997                                       


Q ss_pred             -------------------cCcEeccCCCCcEEeCCCCC--eEEeecCcccc
Q 013522          137 -------------------RGVYHRDLKPENLLLDEDGN--LKVTDFGLSAF  167 (441)
Q Consensus       137 -------------------~gi~HrDLkp~NILl~~~~~--vkl~DFGla~~  167 (441)
                                         .+++|+|++|.|||++.++.  +.|+||+.+..
T Consensus       197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                               36999999999999998764  68999998864


No 261
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.19  E-value=8.6e-12  Score=120.20  Aligned_cols=181  Identities=17%  Similarity=0.217  Sum_probs=122.7

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCC--cceEEEEEEeCC---EEEEE
Q 013522           24 GRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMV-KHKH--IVELHEVMASKS---KIYFA   97 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~hpn--Iv~l~~~~~~~~---~~~lv   97 (441)
                      .+.++.|....||.+.     ..+++|+-...     .....+.+|..+|+.+ .+..  +.+++......+   ..|+|
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v   94 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG   94 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence            3558999999999864     46888885422     2356789999999887 3333  345555443333   35899


Q ss_pred             EeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-----------------------------------------
Q 013522           98 MDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHS-----------------------------------------  136 (441)
Q Consensus        98 ~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~-----------------------------------------  136 (441)
                      ||+++|.+|.+... ..++..+...++.|+...|+.||+                                         
T Consensus        95 m~~i~G~~l~~~~~-~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  173 (304)
T 3sg8_A           95 FTKIKGVPLTPLLL-NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV  173 (304)
T ss_dssp             EECCCCEECCHHHH-HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred             EcccCCeECCcccc-ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence            99999988875433 347788888899999999999886                                         


Q ss_pred             -----------------cCcEeccCCCCcEEeCC--CCCeEEeecCccccccccccCCcccccccCCCc---cchhhh--
Q 013522          137 -----------------RGVYHRDLKPENLLLDE--DGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAY---VAPEVI--  192 (441)
Q Consensus       137 -----------------~gi~HrDLkp~NILl~~--~~~vkl~DFGla~~~~~~~~~~~~~~~~gt~~y---~APE~l--  192 (441)
                                       ..++|+|++|.||++++  ++.+.|+||+.+...+....      ......+   ..|+..  
T Consensus       174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D------l~~~~~~~~~~~~~~~~~  247 (304)
T 3sg8_A          174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND------FISLMEDDEEYGMEFVSK  247 (304)
T ss_dssp             HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH------HHTTCCTTTSCCHHHHHH
T ss_pred             HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH------HHHHHhhccccCHHHHHH
Confidence                             13799999999999998  45678999998864322110      0001111   223221  


Q ss_pred             --hccCCCC---------CcccHHHHHHHHHHHhhCCCCC
Q 013522          193 --SKKGYDG---------AKADIWSCGVILYVLLAGFLPF  221 (441)
Q Consensus       193 --~~~~~~~---------~~~DiwSlGvil~~ll~G~~Pf  221 (441)
                        ...+...         ...+.|++|.++|.+.+|..+|
T Consensus       248 ~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          248 ILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence              1111110         1268999999999999998776


No 262
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=99.00  E-value=2.2e-09  Score=88.20  Aligned_cols=86  Identities=13%  Similarity=0.205  Sum_probs=74.5

Q ss_pred             cccccCCchhhHHHHHHHHHHcCcEEEeec-CeEEEEeeecCCccceEEEEEEEEec-CceEEEEEEccCCChhhhHHHh
Q 013522          333 RFATTRPASSVISRFEEVAKAVKFNVKTSE-SRVRLQGQESGRKGKLAINADIFAVT-PSLLVVEVKKDNGDTLEYNQFC  410 (441)
Q Consensus       333 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~-~~~~~v~~~~~~Gd~le~~~~~  410 (441)
                      .-+|..+|.+++..|+++++++|+.++.++ +.+++.......++.+.|.+||+++. +++++|+|+|.+||++.|+++|
T Consensus        32 ~tTS~~~P~eIm~eI~rvL~~~gi~~~~~g~y~l~C~~~~~~~~~~v~fElEVckl~~~~l~gV~~kRi~Gd~~~yk~lc  111 (120)
T 3ose_A           32 KTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIA  111 (120)
T ss_dssp             CCEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCTTTTCCEEEEEEEEEEGGGTEEEEEEEEEESCHHHHHHHH
T ss_pred             cCcccCCHHHHHHHHHHHHHHCCCEEEEcCCEEEEEEecCCCCCccEEEEEEEEEecCCCceeEEEEecCCCHHHHHHHH
Confidence            346788999999999999999999999876 67888874444567899999999995 8999999999999999999998


Q ss_pred             hhhhhhhhc
Q 013522          411 SNELRPALK  419 (441)
Q Consensus       411 ~~~l~~~l~  419 (441)
                      . +|.+.|+
T Consensus       112 ~-~il~~L~  119 (120)
T 3ose_A          112 S-KIANELK  119 (120)
T ss_dssp             H-HHHHHCC
T ss_pred             H-HHHHHhc
Confidence            7 6777664


No 263
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.91  E-value=7e-09  Score=100.56  Aligned_cols=134  Identities=20%  Similarity=0.267  Sum_probs=101.7

Q ss_pred             CeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCC----CCcceEEEEEEeCCEEE
Q 013522           20 KYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKH----KHIVELHEVMASKSKIY   95 (441)
Q Consensus        20 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h----pnIv~l~~~~~~~~~~~   95 (441)
                      .+.-.+.++.|..+.||++     |..+++|+....     .....+.+|..+|+.+.+    ..+.+++.+    +..|
T Consensus        38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~  103 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF  103 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred             ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence            3445678999999999998     667888976332     224568899999998866    234455554    4568


Q ss_pred             EEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 013522           96 FAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRG-------------------------------------  138 (441)
Q Consensus        96 lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~g-------------------------------------  138 (441)
                      +||||++|.++..... ..++..+...++.++...|+.||+..                                     
T Consensus       104 lvme~i~G~~l~~~~~-~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (320)
T 3r70_A          104 NIMKYIKGERITYEQY-HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT  182 (320)
T ss_dssp             EEEECCCCBCCCHHHH-TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEeecCCcccccccc-ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence            9999999988864432 34677778888888888888888432                                     


Q ss_pred             --------------------------cEeccCCCCcEEeCCCCCeEEeecCccccc
Q 013522          139 --------------------------VYHRDLKPENLLLDEDGNLKVTDFGLSAFS  168 (441)
Q Consensus       139 --------------------------i~HrDLkp~NILl~~~~~vkl~DFGla~~~  168 (441)
                                                ++|+|++|.||+++.++.+.|+||+.+...
T Consensus       183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence                                      399999999999998666799999998643


No 264
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.74  E-value=1.3e-07  Score=91.00  Aligned_cols=133  Identities=19%  Similarity=0.217  Sum_probs=96.2

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCC---CcceEEEEEE-eCCEEEEEEe
Q 013522           24 GRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHK---HIVELHEVMA-SKSKIYFAMD   99 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp---nIv~l~~~~~-~~~~~~lv~E   99 (441)
                      .+.++.|....||+.     |..+++|+-..     ......+.+|..+|+.|.+.   .+.+.+.+.. ..+..|+|||
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e   93 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR   93 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence            356788999999988     56788887421     23456889999999999652   3556666664 4456789999


Q ss_pred             ccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc------------------------------------------
Q 013522          100 LVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSR------------------------------------------  137 (441)
Q Consensus       100 ~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~------------------------------------------  137 (441)
                      |++|..+.+..- ..++......+..++...|+.||+.                                          
T Consensus        94 ~i~G~~l~~~~~-~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           94 KVQGQILGEDGM-AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             CCCSEECHHHHH-TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             ccCCeECchhhh-hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            999988866322 2345556666666666666666642                                          


Q ss_pred             ------------------CcEeccCCCCcEEeCC---CCCe-EEeecCcccc
Q 013522          138 ------------------GVYHRDLKPENLLLDE---DGNL-KVTDFGLSAF  167 (441)
Q Consensus       138 ------------------gi~HrDLkp~NILl~~---~~~v-kl~DFGla~~  167 (441)
                                        .++|+|++|.||+++.   ++.+ .|+||+.+..
T Consensus       173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                              3599999999999987   4554 8999998764


No 265
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.68  E-value=2.6e-07  Score=86.77  Aligned_cols=131  Identities=15%  Similarity=0.224  Sum_probs=96.5

Q ss_pred             cccCc-eEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCEEEEEEeccCCCc
Q 013522           28 GHGTF-AKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-HKHIVELHEVMASKSKIYFAMDLVKGGE  105 (441)
Q Consensus        28 G~G~f-g~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~lv~E~~~gg~  105 (441)
                      ..|.. +.||+......+..+.+|+-..      .....+.+|..+|+.|. +--+.+++.++.+.+..|+|||+++|.+
T Consensus        33 ~~G~S~~~v~rl~~~~~~~~~~lk~~~~------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           33 NVGQSGATIYRLYGKPNAPELFLKHGKG------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             ECSSSSCEEEEEECCTTCCCEEEEEEET------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             cCCCcCCeEEEEEecCCCeEEEEEECCC------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            33444 4799988777778899998643      23567889999999884 3346788899999999999999999988


Q ss_pred             hHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh-------------------------------------------------
Q 013522          106 LFNKIAKGRLREDVARVYFQQLISAVDFCHS-------------------------------------------------  136 (441)
Q Consensus       106 L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~-------------------------------------------------  136 (441)
                      +.+.....   ......+..++...|.-||+                                                 
T Consensus       107 ~~~~~~~~---~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  183 (272)
T 4gkh_A          107 AFQVLEEY---PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM  183 (272)
T ss_dssp             HHHHHHHC---GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred             ccccccCC---HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence            77655432   12233455566666666663                                                 


Q ss_pred             ---------cCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522          137 ---------RGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus       137 ---------~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                               ..++|+|+.|.||+++.++.+-|+||+.+..
T Consensus       184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                     1279999999999999877677999998764


No 266
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.55  E-value=3.5e-07  Score=90.17  Aligned_cols=77  Identities=14%  Similarity=0.123  Sum_probs=58.6

Q ss_pred             eEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCC--cceEEEEEEeC-CEEEEE
Q 013522           21 YELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKH--IVELHEVMASK-SKIYFA   97 (441)
Q Consensus        21 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn--Iv~l~~~~~~~-~~~~lv   97 (441)
                      ..-.+.++.|....+|....  ++..+++|+....        ..+.+|..+++.|....  +.+++.+..+. +..|+|
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv  112 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI  112 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred             CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence            44567799999999999885  6788999987432        25788999999886533  56677776654 678999


Q ss_pred             EeccCCCchH
Q 013522           98 MDLVKGGELF  107 (441)
Q Consensus        98 ~E~~~gg~L~  107 (441)
                      |||++|..+.
T Consensus       113 ~e~l~G~~l~  122 (362)
T 3ovc_A          113 SRRAQGVTLQ  122 (362)
T ss_dssp             EECCCSEETT
T ss_pred             EEecCCCCcc
Confidence            9999986553


No 267
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.42  E-value=5.5e-07  Score=89.71  Aligned_cols=80  Identities=10%  Similarity=0.104  Sum_probs=50.9

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEeecccc-cch---hhHHHHHHHHHHHHhCCC--CC-cceEEEEEEeCCEEEE
Q 013522           24 GRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKV-IKV---GMMEQIKREISVMKMVKH--KH-IVELHEVMASKSKIYF   96 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~---~~~~~~~~Ei~il~~l~h--pn-Iv~l~~~~~~~~~~~l   96 (441)
                      .+.||.|.++.||++....+++.+++|....... ...   ...+++..|..+|+.+..  |. +.+++.+  +....++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            4689999999999997655678999998653211 000   123456789999987742  33 4456644  3445689


Q ss_pred             EEeccCCCc
Q 013522           97 AMDLVKGGE  105 (441)
Q Consensus        97 v~E~~~gg~  105 (441)
                      ||||+.|..
T Consensus       113 vmE~l~g~~  121 (397)
T 2olc_A          113 VMEDLSHLK  121 (397)
T ss_dssp             EECCCTTSE
T ss_pred             EEEeCCCcc
Confidence            999998743


No 268
>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1
Probab=98.42  E-value=4.6e-07  Score=74.27  Aligned_cols=85  Identities=13%  Similarity=0.186  Sum_probs=70.8

Q ss_pred             ccccCCchhhHHHHHHHHHHcCcEEEeec-CeEEEEeeecCCccceEEEEEEEEec-CceEEEEEEccCCChhhhHHHhh
Q 013522          334 FATTRPASSVISRFEEVAKAVKFNVKTSE-SRVRLQGQESGRKGKLAINADIFAVT-PSLLVVEVKKDNGDTLEYNQFCS  411 (441)
Q Consensus       334 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~-~~~~~v~~~~~~Gd~le~~~~~~  411 (441)
                      .+|..++.+++..+..+++++++.|+.++ +.+++.......+..+.|.+||+.+. .+++.|+|+|.+||...|+++|.
T Consensus        33 tTSsk~P~eIm~EI~rvL~~~~i~~k~~~~y~L~C~~~~~~~~~~vkfEiEVcKvp~l~l~GI~fKRisGd~w~YK~lc~  112 (126)
T 1v5s_A           33 QGSSGSSGDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIAS  112 (126)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHTTEEEEEEETTEEEEEECSSSTTTCEEEEEECCCCTTTCSCCCEEEEEESCHHHHHHHHH
T ss_pred             eecCCCHHHHHHHHHHHHHHcCCcEEEECCEEEEEEECCCCCCceEEEEEEEEEecCCCceeEEEeeccCchhHHHHHHH
Confidence            35677899999999999999999999744 66888663333456789999999994 78999999999999999999997


Q ss_pred             hhhhhhhc
Q 013522          412 NELRPALK  419 (441)
Q Consensus       412 ~~l~~~l~  419 (441)
                       +|-..|+
T Consensus       113 -~IL~eLk  119 (126)
T 1v5s_A          113 -KIANELK  119 (126)
T ss_dssp             -HHHHHTT
T ss_pred             -HHHHHHh
Confidence             5666665


No 269
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.41  E-value=1.8e-06  Score=82.39  Aligned_cols=78  Identities=13%  Similarity=0.093  Sum_probs=59.6

Q ss_pred             eEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCC---CcceEEEEEEeCCEEEEE
Q 013522           21 YELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHK---HIVELHEVMASKSKIYFA   97 (441)
Q Consensus        21 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp---nIv~l~~~~~~~~~~~lv   97 (441)
                      ..-.+.||.|.++.||++.. .+|+.+++|+......   .....+.+|+..|+.|.+.   .+.+++.+.    ..|+|
T Consensus        17 ~~~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~~---~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lv   88 (288)
T 3d1u_A           17 VAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAP---ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA   88 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCC---CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred             ccceeeeCCcchhheEEEEe-CCCCeEEEEecCCCCc---chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEE
Confidence            44567899999999999986 5788999998643321   1234678999999999765   577888763    35899


Q ss_pred             EeccCCCch
Q 013522           98 MDLVKGGEL  106 (441)
Q Consensus        98 ~E~~~gg~L  106 (441)
                      |||++|+.+
T Consensus        89 me~l~g~~~   97 (288)
T 3d1u_A           89 MEWVDERPP   97 (288)
T ss_dssp             EECCCCCCC
T ss_pred             EEecccCCC
Confidence            999999764


No 270
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.39  E-value=5.3e-07  Score=88.34  Aligned_cols=86  Identities=13%  Similarity=0.164  Sum_probs=57.2

Q ss_pred             EEeeee-cccCceEEEEEEEc--C----CCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-C--CCcceEEEEEEeC
Q 013522           22 ELGRML-GHGTFAKVYLARNL--Q----TGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-H--KHIVELHEVMASK   91 (441)
Q Consensus        22 ~i~~~L-G~G~fg~Vy~a~~~--~----~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h--pnIv~l~~~~~~~   91 (441)
                      ...+.| +.|....+|+....  .    ++..+++|+..............+.+|+.+|+.|. +  ..+.+++.+..+.
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~  102 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG  102 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence            345678 89999999998753  1    26678899865432000000135678999988884 2  3567788877655


Q ss_pred             ---CEEEEEEeccCCCchH
Q 013522           92 ---SKIYFAMDLVKGGELF  107 (441)
Q Consensus        92 ---~~~~lv~E~~~gg~L~  107 (441)
                         +..|+||||++|..+.
T Consensus       103 ~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          103 DVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TTTSSCEEEEECCCCBCCC
T ss_pred             CccCCceEEEEecCCCChh
Confidence               3568999999986654


No 271
>4eai_A 5'-AMP-activated protein kinase catalytic subunit linker, 5'-AMP-activated protein...; AMPK, transferase; HET: AMP; 2.29A {Rattus norvegicus} PDB: 4eaj_A* 4eak_A* 4eal_A*
Probab=98.37  E-value=2e-06  Score=68.07  Aligned_cols=88  Identities=13%  Similarity=0.270  Sum_probs=71.9

Q ss_pred             hhhcccccCCchhhHHHHHHHHHHcCcEEEeec-CeEEEEeeecCCccceEEEEEEEEecCceEEEEEEccCC-------
Q 013522          330 EELRFATTRPASSVISRFEEVAKAVKFNVKTSE-SRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNG-------  401 (441)
Q Consensus       330 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~v~~~~~~G-------  401 (441)
                      ......|...+.+++..+-.+.+.+|+.|+..+ +.|++....+.....+.|.+++|++.+..+|+||++..|       
T Consensus         8 W~LGIrS~~~P~eiM~eIyraLk~lg~~Wk~~~~Y~lkcR~~~~~~~~~vK~~lQLYkv~~~~YLLDfq~i~g~~~~~~~   87 (106)
T 4eai_A            8 WHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRTYLLDFRSIDDGGGGGGG   87 (106)
T ss_dssp             EEESEEECSCHHHHHHHHHHHHHHHTCEEEEEETTEEEEEEECTTTCCEEEEEEEEEECSSSCEEEEEEECCSSCCCSSS
T ss_pred             ceEcceeCCCHHHHHHHHHHHHHHcCCEEeeCCceEEEEEEcCCCCCceeEEEEEEEEecCCcEEEEEEeccCCCCCCCC
Confidence            334456778899999999999999999999755 889988743333456789999999999999999999999       


Q ss_pred             -ChhhhHHHhhhhhhhhh
Q 013522          402 -DTLEYNQFCSNELRPAL  418 (441)
Q Consensus       402 -d~le~~~~~~~~l~~~l  418 (441)
                       .+++|-++|.+ +-..|
T Consensus        88 ~~~~~F~d~ca~-li~~l  104 (106)
T 4eai_A           88 SHTIEFFEMCAN-LIKIL  104 (106)
T ss_dssp             CHHHHHHHHHHH-HHHHC
T ss_pred             cCcEeHHHHHHH-HHHHH
Confidence             49999999974 55444


No 272
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.30  E-value=4.8e-06  Score=80.51  Aligned_cols=134  Identities=13%  Similarity=0.126  Sum_probs=79.0

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-----CCCcceEE-E--EEEeCCEEE
Q 013522           24 GRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-----HKHIVELH-E--VMASKSKIY   95 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-----hpnIv~l~-~--~~~~~~~~~   95 (441)
                      .+.|+.|..+.||++..  ++..+++|+....       ...+..|..+++.|.     .|.++... +  +....+..+
T Consensus        37 ~~~l~gG~~n~~~~v~~--~~~~~vlk~~~~~-------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~  107 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHT--DSGAVCLKRIHRP-------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLF  107 (346)
T ss_dssp             EEECC----CEEEEEEE--TTEEEEEEEECSC-------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEE
T ss_pred             eeeccccccCcEEEEEe--CCCCEEEEecCCC-------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEE
Confidence            35567778899999986  3345899998652       133445556555442     35444310 0  123467889


Q ss_pred             EEEeccCCCchH--------------HHHhc--CCC--C-----------HH--------H-------------------
Q 013522           96 FAMDLVKGGELF--------------NKIAK--GRL--R-----------ED--------V-------------------  119 (441)
Q Consensus        96 lv~E~~~gg~L~--------------~~i~~--~~l--~-----------~~--------~-------------------  119 (441)
                      ++|||++|.++.              ..+..  ..+  +           ..        .                   
T Consensus       108 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  187 (346)
T 2q83_A          108 VVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQL  187 (346)
T ss_dssp             EEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred             EEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHH
Confidence            999999986542              11111  101  1           00        0                   


Q ss_pred             ----HHHHHHHHHHHHHHHh-------------hcCcEeccCCCCcEEeCCCCCeEEeecCccc
Q 013522          120 ----ARVYFQQLISAVDFCH-------------SRGVYHRDLKPENLLLDEDGNLKVTDFGLSA  166 (441)
Q Consensus       120 ----~~~~~~qll~aL~ylH-------------~~gi~HrDLkp~NILl~~~~~vkl~DFGla~  166 (441)
                          ...+..++..++.+|+             ..+++|+|++|.|||++.++.+.|+||+.+.
T Consensus       188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          188 YLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence                1112223344566665             3579999999999999888899999999764


No 273
>2v8q_A 5'-AMP-activated protein kinase catalytic subunit; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.129.6.2 PDB: 2v92_A* 2v9j_A* 2y94_C*
Probab=98.15  E-value=1.3e-05  Score=67.24  Aligned_cols=75  Identities=8%  Similarity=0.199  Sum_probs=60.0

Q ss_pred             hhcccccCCchhhHHHHHHHHHHcCcEEEeec-CeEEEEeeecCCccceEEEEEEEEecCceEEEEEEccCCChhh
Q 013522          331 ELRFATTRPASSVISRFEEVAKAVKFNVKTSE-SRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLE  405 (441)
Q Consensus       331 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~v~~~~~~Gd~le  405 (441)
                      .....|+..+.+++..+..+.+.+|+.||+.+ +.|++....+.....+.|.+++|++.++.+||||++..||+-|
T Consensus         6 hLGIrSrs~P~eIM~EVyRALk~Lg~eWK~~~pY~IkcRw~~~~~~~~vKm~LQLYkv~~~~YLLDFk~l~g~~~e   81 (157)
T 2v8q_A            6 HLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRTYLLDFRSIDDEITE   81 (157)
T ss_dssp             EESEEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEECTTTCCEEEEEEEEEECSSSCEEEEEEEECCC---
T ss_pred             eeecccCCCHHHHHHHHHHHHHHcCCEEeeCCCeEEEEEEcCCCCCceEEEEEEEEEecCCCEEEEEEecCCCccc
Confidence            34456777899999999999999999999766 7899887443322357899999999999999999999998755


No 274
>2y8l_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, serine/threonine-protein KI; HET: ADP AMP; 2.50A {Rattus norvegicus} PDB: 2y8q_A* 2ya3_A*
Probab=98.09  E-value=2.1e-05  Score=66.89  Aligned_cols=77  Identities=8%  Similarity=0.173  Sum_probs=62.2

Q ss_pred             hhhhcccccCCchhhHHHHHHHHHHcCcEEEeec-CeEEEEeeecCCccceEEEEEEEEecCceEEEEEEccCCChhh
Q 013522          329 REELRFATTRPASSVISRFEEVAKAVKFNVKTSE-SRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLE  405 (441)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~v~~~~~~Gd~le  405 (441)
                      |......|+..+.+++..+-.+.+.+|+.||+.+ +.|++....+.....+.|.+++|++.++.+||||++..||+-|
T Consensus        18 kWhLGIrSrs~P~eIM~EVyRALk~Lg~eWK~i~pY~IkcRw~~~~~~~~vKmeLQLYKv~~~~YLLDFk~l~Gd~~e   95 (173)
T 2y8l_A           18 AWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRTYLLDFRSIDDEITE   95 (173)
T ss_dssp             EEEESEEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEECTTTCCEEEEEEEEEECSSSCEEEEEEEECCC---
T ss_pred             eeeeecccCCCHHHHHHHHHHHHHHcCCEEeeCCCeEEEEEEcCCCCCeeEEEEEEEEEEcCCCEEEEEEecCCCccc
Confidence            4556677888899999999999999999999866 7799987433222357899999999999999999999998755


No 275
>4eag_A EG:132E8.2 protein; AMPK, transferase; HET: ATP TAM; 2.70A {Drosophila melanogaster}
Probab=97.99  E-value=4.7e-05  Score=61.85  Aligned_cols=78  Identities=14%  Similarity=0.198  Sum_probs=58.6

Q ss_pred             hhhcccccCCchhhHHHHHHHHHHcCcEEEeec-CeEEEEeeecCCccceEEEEEEEEecCceEEEEEEccCCChhhhH
Q 013522          330 EELRFATTRPASSVISRFEEVAKAVKFNVKTSE-SRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYN  407 (441)
Q Consensus       330 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~v~~~~~~Gd~le~~  407 (441)
                      ...-..|+..+.+++..+-.+.+.+++.||..+ +.|++..........+.+.+++|++.+..+|+||+...||..|+.
T Consensus         8 W~LGIrS~~~P~eIM~EVyrALk~Lg~eWK~~~pY~vkcR~~n~~~~~~vKm~LQLYqv~~~~YLLDfk~~~~~~~~~~   86 (130)
T 4eag_A            8 WHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVEQG   86 (130)
T ss_dssp             EEESBCCCSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEECTTTCCEEEEEEEEEESSSSCEEEEEEECC-------
T ss_pred             eeeeeecCCCHHHHHHHHHHHHHHCCCEEeeCCCEEEEEEecCCCCCceeEEEEEEEEecCCcEEEEeccCCcchhhcc
Confidence            334456777789999999999999999999765 788888644444445689999999999999999999999965544


No 276
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.93  E-value=9.2e-05  Score=71.22  Aligned_cols=75  Identities=8%  Similarity=0.198  Sum_probs=60.5

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCEEEEEEec
Q 013522           24 GRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK---HKHIVELHEVMASKSKIYFAMDL  100 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~lv~E~  100 (441)
                      .+.|+.|....+|+...  ++..+++|+....      ....+..|...|+.|.   ...+.+.+.+....+..|+||||
T Consensus        41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~  112 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA  112 (312)
T ss_dssp             EEEECCSSSSEEEEEES--SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred             eEEeCCccceeeeEEEE--CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence            46789999999999985  5678889987543      2467889999998883   35688888888888899999999


Q ss_pred             cCCCch
Q 013522          101 VKGGEL  106 (441)
Q Consensus       101 ~~gg~L  106 (441)
                      ++|..+
T Consensus       113 l~G~~~  118 (312)
T 3jr1_A          113 LNKSKN  118 (312)
T ss_dssp             CCCCCC
T ss_pred             ccCCCC
Confidence            998754


No 277
>2qrd_A SNF1-like protein kinase SSP2; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} SCOP: d.129.6.2 PDB: 2ooy_A* 2qr1_A* 2qrc_A* 2oox_A* 2qre_A*
Probab=97.92  E-value=1.5e-05  Score=66.22  Aligned_cols=90  Identities=10%  Similarity=0.159  Sum_probs=71.6

Q ss_pred             hhhhcccccCCchhhHHHHHHHHHHcCcEEEee---------c-CeEEEEeeecCC-----ccceEEEEEEEEecCceEE
Q 013522          329 REELRFATTRPASSVISRFEEVAKAVKFNVKTS---------E-SRVRLQGQESGR-----KGKLAINADIFAVTPSLLV  393 (441)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~-----~~~l~~~~~i~~~~~~~~~  393 (441)
                      |......|+..+.+++..+-.+.+.+|+.|+..         + +.|++....+..     ...+.|.+++|++.++.+|
T Consensus        12 kWhlGIRSrs~P~eIM~EVyrALk~Lg~eWk~~~~~~~~~~~~~y~Ik~R~~~~~~~~~~~~~~vkm~iQLYqv~~~~YL   91 (137)
T 2qrd_A           12 KWHFGVRCRGDAPEILLAVYRALQRAGAQFTVPKPVNGKYRSDMYTIKSRWEIPHCKREGKNTYAYIELQLYEVMPGCFM   91 (137)
T ss_dssp             CCEESEEEESCHHHHHHHHHHHHHHHTCEECCCCCBTTBCCGGGGEEEEEEECHHHHHTTCCEEEEEEEEEEEEETTEEE
T ss_pred             ccccccccCCCHHHHHHHHHHHHHHCCCEEEeccccccccCCCceEEEEEEecCCCccccCCceEEEEEEEEEecCCcEE
Confidence            455667788899999999999999999999976         5 668887643321     2357899999999999999


Q ss_pred             EEEEccCCC---------------h----hhhHHHhhhhhhhhhc
Q 013522          394 VEVKKDNGD---------------T----LEYNQFCSNELRPALK  419 (441)
Q Consensus       394 v~~~~~~Gd---------------~----le~~~~~~~~l~~~l~  419 (441)
                      |||+..+|+               .    +.|-++|. .|-..|.
T Consensus        92 lDFk~~~~~~~~~~~~~~~~~~~~~~~s~~~Fldlca-~Li~eLa  135 (137)
T 2qrd_A           92 LDVKSNGYKDIYSHPERTADHGMDDLKSSFPFLDLCA-MLVCKLF  135 (137)
T ss_dssp             EEEEEEEEEESCC-------------CCCTTHHHHHH-HHHHHHH
T ss_pred             EEEEecCCccccccCccccccCCccccccccHHHHHH-HHHHHHh
Confidence            999999999               5    89999987 4655553


No 278
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.88  E-value=4.8e-05  Score=76.27  Aligned_cols=32  Identities=22%  Similarity=0.445  Sum_probs=28.2

Q ss_pred             hhcCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522          135 HSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus       135 H~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      +...++|+|++|.|||++.++ +.|+||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            456899999999999998876 99999998864


No 279
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.76  E-value=0.00025  Score=63.80  Aligned_cols=120  Identities=19%  Similarity=0.136  Sum_probs=79.1

Q ss_pred             chHHHHhc--CCCCHHHHHHHHHHHHHHHHHHh-hcCcEeccCCCCcEEeCCCCCeEEeecCccccccccccCCcccccc
Q 013522          105 ELFNKIAK--GRLREDVARVYFQQLISAVDFCH-SRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFSEHLKQDGLLHTTC  181 (441)
Q Consensus       105 ~L~~~i~~--~~l~~~~~~~~~~qll~aL~ylH-~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~~~~  181 (441)
                      +|.+.+..  ++++|+++|.++.|.+.+|.-+- .+.-..+=+.|..|++..+|+|-+.+ +.+.              .
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------~   98 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------------A   98 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--------------c
Confidence            68888864  78999999999999999987762 12222344567899999999988774 2211              1


Q ss_pred             cCCCccchhhhhccCCCCCcccHHHHHHHHHHHhhCCCCCCCCcHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCC
Q 013522          182 GTPAYVAPEVISKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDP  258 (441)
Q Consensus       182 gt~~y~APE~l~~~~~~~~~~DiwSlGvil~~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  258 (441)
                      ....+.|||...  ...+.+.=|+|||+++|..+--.+|                 ..-+..+|+.+.+||..|...
T Consensus        99 ~~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALDygL~-----------------e~eE~eLS~~LE~LL~~Mt~~  156 (229)
T 2yle_A           99 GEPPPVAGKLGY--SQCMETEVIESLGIIIYKALDYGLK-----------------ENEERELSPPLEQLIDHMANT  156 (229)
T ss_dssp             --------CCSS--SSSCHHHHHHHHHHHHHHHHTTTCC-----------------TTEEECCCHHHHHHHHHHTTC
T ss_pred             cccCCCChhhcc--ccchHHHHHHHHHHHHHHHhhcCCC-----------------cccchhhCHHHHHHHHHHHhc
Confidence            233466888753  2334778899999999987732111                 112345899999999999866


No 280
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.70  E-value=0.0001  Score=71.18  Aligned_cols=134  Identities=13%  Similarity=0.145  Sum_probs=71.2

Q ss_pred             eeecccCceE-EEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCEEEEEEecc
Q 013522           25 RMLGHGTFAK-VYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKH--KHIVELHEVMASKSKIYFAMDLV  101 (441)
Q Consensus        25 ~~LG~G~fg~-Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h--pnIv~l~~~~~~~~~~~lv~E~~  101 (441)
                      +.|+.|+... +|+... .+|..+++|.......      ..+..|+.+++.+..  -.+.+++.+..+.+  +++||++
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l   94 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL   94 (333)
T ss_dssp             CC--------CCEEEEC-TTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred             eECCCCCCCceEEEEEc-CCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence            4566665554 666653 2366777776543210      234567777776632  23556666543333  7899999


Q ss_pred             CCCchHHHHhcCC---------------------------CCHHHHH-------H-HH------------HHHHHHHHHH
Q 013522          102 KGGELFNKIAKGR---------------------------LREDVAR-------V-YF------------QQLISAVDFC  134 (441)
Q Consensus       102 ~gg~L~~~i~~~~---------------------------l~~~~~~-------~-~~------------~qll~aL~yl  134 (441)
                      .|..+.+.+....                           +......       . +.            ..+...+..+
T Consensus        95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l  174 (333)
T 3csv_A           95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI  174 (333)
T ss_dssp             CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred             CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence            7766544332110                           1111110       0 00            0111122222


Q ss_pred             ------hhcCcEeccCCCCcEEeCCC----CCeEEeecCcccc
Q 013522          135 ------HSRGVYHRDLKPENLLLDED----GNLKVTDFGLSAF  167 (441)
Q Consensus       135 ------H~~gi~HrDLkp~NILl~~~----~~vkl~DFGla~~  167 (441)
                            +...++|||+.+.||+++.+    +.+.|+||+.+..
T Consensus       175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence                  23579999999999999874    6799999998763


No 281
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.65  E-value=0.00011  Score=70.11  Aligned_cols=131  Identities=14%  Similarity=0.131  Sum_probs=74.9

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCEEEEEEecc-
Q 013522           24 GRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHI-VELHEVMASKSKIYFAMDLV-  101 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~lv~E~~-  101 (441)
                      .+.|+.|....+|++      ..+.+|+.......    .-...+|+.+++.+...++ .+++.+.  .+.-++++||+ 
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~----~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEE----YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccc----eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence            678999999999999      56888987543111    1123468888877642222 4555543  33347899999 


Q ss_pred             CCCchHHH------------------Hhc-C-CCC-----HHHHHHHHHH--------------HHHHHHHHh-------
Q 013522          102 KGGELFNK------------------IAK-G-RLR-----EDVARVYFQQ--------------LISAVDFCH-------  135 (441)
Q Consensus       102 ~gg~L~~~------------------i~~-~-~l~-----~~~~~~~~~q--------------ll~aL~ylH-------  135 (441)
                      .|.++...                  +.. . .++     ...+..+..+              +...+..+.       
T Consensus        91 ~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~  170 (301)
T 3dxq_A           91 GAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHP  170 (301)
T ss_dssp             TCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcC
Confidence            66544210                  011 0 010     1111122111              111111111       


Q ss_pred             -hcCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522          136 -SRGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus       136 -~~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                       ...++|+|+.|.||+ ..++.+.|+||..+..
T Consensus       171 ~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          171 LPLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence             124899999999999 5667899999998763


No 282
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.63  E-value=0.00024  Score=68.03  Aligned_cols=136  Identities=13%  Similarity=0.169  Sum_probs=77.3

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-----CCCcceEE-E--EEEeCCEEE
Q 013522           24 GRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-----HKHIVELH-E--VMASKSKIY   95 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-----hpnIv~l~-~--~~~~~~~~~   95 (441)
                      .+.|+.|....+|++... + ..+++|+.....     ..+.+..|+.+++.|.     -|.++... +  +....+..+
T Consensus        27 ~~~i~~G~~n~~~~v~~~-~-g~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~   99 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTT-K-DPLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPA   99 (322)
T ss_dssp             EEEECC---EEEEEEEES-S-CCEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEE
T ss_pred             eeccCCCcccceEEEEeC-C-ccEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEE
Confidence            466788988999999862 3 368899886521     1134567787777663     23333210 0  112346789


Q ss_pred             EEEeccCCCchHH--------------HHhc--CCC--------CHHHHHHHH---------------HHHHHHHHHHhh
Q 013522           96 FAMDLVKGGELFN--------------KIAK--GRL--------REDVARVYF---------------QQLISAVDFCHS  136 (441)
Q Consensus        96 lv~E~~~gg~L~~--------------~i~~--~~l--------~~~~~~~~~---------------~qll~aL~ylH~  136 (441)
                      ++++|++|..+..              .+..  ..+        ....-...+               ..+...+.++++
T Consensus       100 ~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~  179 (322)
T 2ppq_A          100 ALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAA  179 (322)
T ss_dssp             EEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Confidence            9999999864311              1111  001        100000000               113344555542


Q ss_pred             -------cCcEeccCCCCcEEeCCCCCeEEeecCccc
Q 013522          137 -------RGVYHRDLKPENLLLDEDGNLKVTDFGLSA  166 (441)
Q Consensus       137 -------~gi~HrDLkp~NILl~~~~~vkl~DFGla~  166 (441)
                             .+++|+|++|.|||++.++.+.|+||+.+.
T Consensus       180 ~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          180 HWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             HCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence                   479999999999999877656899999775


No 283
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.56  E-value=0.00028  Score=70.98  Aligned_cols=74  Identities=11%  Similarity=0.170  Sum_probs=50.7

Q ss_pred             eeeecccCceEEEEEEEcC-------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCEEE
Q 013522           24 GRMLGHGTFAKVYLARNLQ-------TGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHI-VELHEVMASKSKIY   95 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~-------~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~   95 (441)
                      .+.|+.|....||++....       ++..+.+|+.....     ..+.+.+|..+++.|...++ .++++.+.+    .
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-----~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g  148 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-----TESHLVAESVIFTLLSERHLGPKLYGIFSG----G  148 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-----CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-----cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence            4678889999999998643       35789999884321     11345579999988853333 567766542    3


Q ss_pred             EEEeccCCCch
Q 013522           96 FAMDLVKGGEL  106 (441)
Q Consensus        96 lv~E~~~gg~L  106 (441)
                      +|+||++|.+|
T Consensus       149 ~v~e~l~G~~l  159 (429)
T 1nw1_A          149 RLEEYIPSRPL  159 (429)
T ss_dssp             EEECCCCEEEC
T ss_pred             EEEEEeCCccc
Confidence            89999987443


No 284
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.48  E-value=0.00032  Score=69.25  Aligned_cols=134  Identities=14%  Similarity=0.161  Sum_probs=82.6

Q ss_pred             eeecccCceEEEEEEEcC-------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCEEEE
Q 013522           25 RMLGHGTFAKVYLARNLQ-------TGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-HKHIVELHEVMASKSKIYF   96 (441)
Q Consensus        25 ~~LG~G~fg~Vy~a~~~~-------~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~l   96 (441)
                      +.|..|-...+|++....       +++.+.+|+.... .   .....+.+|..+++.|. +.-..++++.+.+    .+
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~  127 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-L---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR  127 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-c---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence            567778888999998642       3578999986331 1   12456678999998884 3223566766543    28


Q ss_pred             EEeccCCCchHH--------------HH---hc-----CC-CC--HHHHHHHHHHHHH-------------------HHH
Q 013522           97 AMDLVKGGELFN--------------KI---AK-----GR-LR--EDVARVYFQQLIS-------------------AVD  132 (441)
Q Consensus        97 v~E~~~gg~L~~--------------~i---~~-----~~-l~--~~~~~~~~~qll~-------------------aL~  132 (441)
                      ||||++|.+|..              .+   ..     ++ ..  ...+.+++.++-.                   .+.
T Consensus       128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~  207 (379)
T 3feg_A          128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG  207 (379)
T ss_dssp             EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred             EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence            999999865421              11   11     11 11  3455666655432                   233


Q ss_pred             HHh----h----cCcEeccCCCCcEEeCCC----CCeEEeecCccc
Q 013522          133 FCH----S----RGVYHRDLKPENLLLDED----GNLKVTDFGLSA  166 (441)
Q Consensus       133 ylH----~----~gi~HrDLkp~NILl~~~----~~vkl~DFGla~  166 (441)
                      .|.    .    ..++|+|+.+.||+++.+    +.+.|+||..|.
T Consensus       208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            332    1    359999999999999876    789999999876


No 285
>3t4n_A Carbon catabolite-derepressing protein kinase; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} SCOP: d.129.6.2 PDB: 3tdh_A* 3te5_A* 2qlv_A
Probab=97.43  E-value=0.00057  Score=58.67  Aligned_cols=89  Identities=11%  Similarity=0.116  Sum_probs=68.4

Q ss_pred             hhhhcccccCCchhhHHHHHHHHHHcCcEEEee----cCeEEEEeeecC---------CccceEEEEEEEEecCceEEEE
Q 013522          329 REELRFATTRPASSVISRFEEVAKAVKFNVKTS----ESRVRLQGQESG---------RKGKLAINADIFAVTPSLLVVE  395 (441)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~---------~~~~l~~~~~i~~~~~~~~~v~  395 (441)
                      |......++..+.+++..+..+.+.+|+.||+.    -+.|++....+.         ....+.|.+++|++.++.+|||
T Consensus        50 kW~LGIrS~~~P~eIM~EVyrALk~Lg~~WKk~~~~~pY~IkcRw~~~~~~~~~~~~~~p~~vKmeLQLYkv~~~~YLLD  129 (179)
T 3t4n_A           50 RWHFGIRSRSYPLDVMGEIYIALKNLGAEWAKPSEEDLWTIKLRWKYDIGNKTNTNEKIPDLMKMVIQLFQIETNNYLVD  129 (179)
T ss_dssp             CCEESEEECSCHHHHHHHHHHHHHHHTCEEECCCGGGTTEEEEEECC-----------CCCEEEEEEEEEEEETTEEEEE
T ss_pred             eeeeccccCCCHHHHHHHHHHHHHHcCCEEeeCCCCCceEEEEEEeCCCCcccccccCCCceeEEEEEEEEecCCceEEE
Confidence            344556677888999999999999999999975    367888752211         1134789999999999999999


Q ss_pred             EEccCC----------------------ChhhhHHHhhhhhhhhhc
Q 013522          396 VKKDNG----------------------DTLEYNQFCSNELRPALK  419 (441)
Q Consensus       396 ~~~~~G----------------------d~le~~~~~~~~l~~~l~  419 (441)
                      |+ ..|                      ..+.|-++|. .|--.|.
T Consensus       130 fk-~~G~e~~~~~~~~~~~~~~~e~~~~s~~pFLdlca-~LI~eLa  173 (179)
T 3t4n_A          130 FK-FDGWESSYGDDTTVSNISEDEMSTFSAYPFLHLTT-KLIMELA  173 (179)
T ss_dssp             EE-EEEEECC----------------CCCCHHHHHHHH-HHHHHHH
T ss_pred             EE-eccccccccccccccccccccccccCCccHHHHHH-HHHHHHH
Confidence            99 777                      6788999887 4655553


No 286
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.40  E-value=0.00043  Score=67.90  Aligned_cols=75  Identities=12%  Similarity=0.115  Sum_probs=45.3

Q ss_pred             eeeecccCceEEEEEEEcC--------CCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCC-cceEEEEEEeCCEE
Q 013522           24 GRMLGHGTFAKVYLARNLQ--------TGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKH-IVELHEVMASKSKI   94 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~--------~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpn-Iv~l~~~~~~~~~~   94 (441)
                      .+.|+.|....+|++....        .+..+.+|+......    .......|..+++.+...+ +.+++...  .+  
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~----~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD----ELYNTISEFEVYKTMSKYKIAPQLLNTF--NG--  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG----GTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc----ceecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence            4678888889999998643        136888998754311    1112457888888774333 44666554  22  


Q ss_pred             EEEEeccCCCch
Q 013522           95 YFAMDLVKGGEL  106 (441)
Q Consensus        95 ~lv~E~~~gg~L  106 (441)
                      ++||||++|..+
T Consensus       110 ~~v~e~i~G~~l  121 (369)
T 3c5i_A          110 GRIEEWLYGDPL  121 (369)
T ss_dssp             EEEEECCCSEEC
T ss_pred             cEEEEEecCCcC
Confidence            689999998543


No 287
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.36  E-value=0.00079  Score=64.59  Aligned_cols=134  Identities=14%  Similarity=0.149  Sum_probs=78.4

Q ss_pred             eeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCC--CcceEEEE-----EEeCCEEEEE
Q 013522           25 RMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHK--HIVELHEV-----MASKSKIYFA   97 (441)
Q Consensus        25 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hp--nIv~l~~~-----~~~~~~~~lv   97 (441)
                      ..|+ |....||.+.. .+|+.+++|+......    ....+..|..+++.|...  .+.+++..     ....+..+++
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l  105 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV  105 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence            4566 88889998764 4566799999863321    134667788888776321  23333332     2235677899


Q ss_pred             EeccCCCchH-----------H---HHhc----C------CCCHHH----H------------------HHHHHHHHHHH
Q 013522           98 MDLVKGGELF-----------N---KIAK----G------RLREDV----A------------------RVYFQQLISAV  131 (441)
Q Consensus        98 ~E~~~gg~L~-----------~---~i~~----~------~l~~~~----~------------------~~~~~qll~aL  131 (441)
                      |+|++|..+.           .   .+..    .      ..+...    .                  ...+.+++..+
T Consensus       106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l  185 (328)
T 1zyl_A          106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV  185 (328)
T ss_dssp             EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence            9999885431           0   0110    0      011110    0                  11112222222


Q ss_pred             HHH----hhcCcEeccCCCCcEEeCCCCCeEEeecCccc
Q 013522          132 DFC----HSRGVYHRDLKPENLLLDEDGNLKVTDFGLSA  166 (441)
Q Consensus       132 ~yl----H~~gi~HrDLkp~NILl~~~~~vkl~DFGla~  166 (441)
                      .-+    ....++|+|++|.||+++ + .+.|+||+.+.
T Consensus       186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            222    234689999999999998 4 89999999765


No 288
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.35  E-value=0.0014  Score=61.80  Aligned_cols=79  Identities=13%  Similarity=0.097  Sum_probs=55.8

Q ss_pred             CCeEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCC---CCcceEEEEEEeCCEEE
Q 013522           19 GKYELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKH---KHIVELHEVMASKSKIY   95 (441)
Q Consensus        19 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h---pnIv~l~~~~~~~~~~~   95 (441)
                      .+..-++.+|.|..+.||+.+. .+|+.|.+|+-......   ....+..|...|+.|.-   --+.+.+.+.  .  -+
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--~~   86 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--RT   86 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T--TE
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcc---hhhHHHHHHHHHHHHHhhCCCCcceEEecc--C--ce
Confidence            4556678899999999999985 67899999986543221   12357789999998842   2344555542  2  37


Q ss_pred             EEEeccCCCc
Q 013522           96 FAMDLVKGGE  105 (441)
Q Consensus        96 lv~E~~~gg~  105 (441)
                      +||||+.++.
T Consensus        87 lv~e~l~~~~   96 (288)
T 3f7w_A           87 LAMEWVDERP   96 (288)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEEeecccC
Confidence            8999998754


No 289
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.30  E-value=0.0021  Score=65.00  Aligned_cols=75  Identities=11%  Similarity=0.186  Sum_probs=49.2

Q ss_pred             eeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCEEEEEEeccC
Q 013522           24 GRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHI-VELHEVMASKSKIYFAMDLVK  102 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~lv~E~~~  102 (441)
                      .+.|+.|-...+|++.....+..+.+|+......   ... ...+|..+++.|...++ .++++.+.  +  ..|+||++
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~---~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~  184 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD---EII-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD  184 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC---SCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh---hhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence            4678889999999998754457899998753211   111 12589999998865544 56777663  2  25999999


Q ss_pred             CCch
Q 013522          103 GGEL  106 (441)
Q Consensus       103 gg~L  106 (441)
                      |.+|
T Consensus       185 G~~l  188 (458)
T 2qg7_A          185 GYAL  188 (458)
T ss_dssp             SEEC
T ss_pred             CccC
Confidence            8544


No 290
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.15  E-value=0.0022  Score=62.19  Aligned_cols=31  Identities=16%  Similarity=0.381  Sum_probs=27.9

Q ss_pred             cCcEeccCCCCcEEeCCCCCeEEeecCcccc
Q 013522          137 RGVYHRDLKPENLLLDEDGNLKVTDFGLSAF  167 (441)
Q Consensus       137 ~gi~HrDLkp~NILl~~~~~vkl~DFGla~~  167 (441)
                      .+++|+|+.|.||+++.++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            4699999999999999888999999998764


No 291
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.68  E-value=0.0077  Score=59.71  Aligned_cols=142  Identities=14%  Similarity=0.182  Sum_probs=84.2

Q ss_pred             CeEEeeeecccCceEEEEEEEcC-------CCcEEEEEEeecccc-----------c-chh---hHHHHHHHHHHHHhCC
Q 013522           20 KYELGRMLGHGTFAKVYLARNLQ-------TGKSMAMKVVGKDKV-----------I-KVG---MMEQIKREISVMKMVK   77 (441)
Q Consensus        20 ~y~i~~~LG~G~fg~Vy~a~~~~-------~~~~vAiK~i~~~~~-----------~-~~~---~~~~~~~Ei~il~~l~   77 (441)
                      .+.+ +.|..|-...+|++....       .+..|.+++.-....           . +..   ..+.+..|..+++.+.
T Consensus        54 ~i~v-~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~  132 (401)
T 3f2s_A           54 EFHI-SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILA  132 (401)
T ss_dssp             GCEE-EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHH
T ss_pred             heEE-EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHH
Confidence            3444 556678889999988642       146788888754211           0 000   0123345888888874


Q ss_pred             -CCCcceEEEEEEeCCEEEEEEeccCCCchHH----------HH-------hcCC------CC--HHHHHHHHHHHHH--
Q 013522           78 -HKHIVELHEVMASKSKIYFAMDLVKGGELFN----------KI-------AKGR------LR--EDVARVYFQQLIS--  129 (441)
Q Consensus        78 -hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~----------~i-------~~~~------l~--~~~~~~~~~qll~--  129 (441)
                       +--..++++++.+.    +|+||++|.+|..          .+       ....      ..  ...+.+++.++..  
T Consensus       133 ~~Gi~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~  208 (401)
T 3f2s_A          133 ERSLGPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIK  208 (401)
T ss_dssp             HTTSSCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCC
T ss_pred             hcCCCCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcc
Confidence             33355677776432    8999999855411          11       1111      11  2344555544321  


Q ss_pred             --------------------HHHH----Hhh----cCcEeccCCCCcEEeCCC------CCeEEeecCccc
Q 013522          130 --------------------AVDF----CHS----RGVYHRDLKPENLLLDED------GNLKVTDFGLSA  166 (441)
Q Consensus       130 --------------------aL~y----lH~----~gi~HrDLkp~NILl~~~------~~vkl~DFGla~  166 (441)
                                          -+..    |.+    ..++|+|+.+.||+++.+      +.+.|+||..|.
T Consensus       209 ~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          209 FTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             CCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             CcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence                                1222    222    359999999999999876      789999999875


No 292
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.38  E-value=0.0094  Score=59.58  Aligned_cols=75  Identities=12%  Similarity=0.202  Sum_probs=48.7

Q ss_pred             eeeecccCceEEEEEEEcCC-------CcEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCEEE
Q 013522           24 GRMLGHGTFAKVYLARNLQT-------GKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVK-HKHIVELHEVMASKSKIY   95 (441)
Q Consensus        24 ~~~LG~G~fg~Vy~a~~~~~-------~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~   95 (441)
                      .+.|..|-...+|++.....       +..+.+++.....    ...-...+|..+++.+. +.-..++++.+.  +  +
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t----~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~  146 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV----GKFYDSKVELDVFRYLSNINIAPNIIADFP--E--G  146 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-----CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--E
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc----chhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--C
Confidence            45677888899999987421       5789999864321    11112357888888874 322455665432  2  7


Q ss_pred             EEEeccCCCch
Q 013522           96 FAMDLVKGGEL  106 (441)
Q Consensus        96 lv~E~~~gg~L  106 (441)
                      .|+||++|..|
T Consensus       147 ~I~efI~G~~l  157 (424)
T 3mes_A          147 RIEEFIDGEPL  157 (424)
T ss_dssp             EEEECCCSEEC
T ss_pred             EEEEEeCCccC
Confidence            89999998653


No 293
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.45  E-value=0.24  Score=48.83  Aligned_cols=30  Identities=33%  Similarity=0.535  Sum_probs=25.6

Q ss_pred             CcEeccCCCCcEEe------CCCCCeEEeecCcccc
Q 013522          138 GVYHRDLKPENLLL------DEDGNLKVTDFGLSAF  167 (441)
Q Consensus       138 gi~HrDLkp~NILl------~~~~~vkl~DFGla~~  167 (441)
                      .++|+|+.+.|||+      ++++.+.++||.+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            36899999999999      4567799999999864


No 294
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.84  E-value=2.4  Score=37.86  Aligned_cols=82  Identities=15%  Similarity=0.080  Sum_probs=63.2

Q ss_pred             CCCCcceEEEEEEeCCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHH-HHhhcCcEeccCCCCcEEeCCCC
Q 013522           77 KHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVD-FCHSRGVYHRDLKPENLLLDEDG  155 (441)
Q Consensus        77 ~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~-ylH~~gi~HrDLkp~NILl~~~~  155 (441)
                      .||++  -..+-.+.+.+.+.++.-+++.-+..++  .++..+.++++.+|+.... ++  ..-+|--|+|+||++|.++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~~  121 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRAL  121 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTTC
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCCC
Confidence            68888  4555577888888888776665555553  4788888888888887665 44  4456778999999999999


Q ss_pred             CeEEeecCc
Q 013522          156 NLKVTDFGL  164 (441)
Q Consensus       156 ~vkl~DFGl  164 (441)
                      .++|.-.|+
T Consensus       122 ~p~i~hRGi  130 (219)
T 4ano_A          122 EPFFLHVGV  130 (219)
T ss_dssp             CEEESCCEE
T ss_pred             cEEEEEcCC
Confidence            999998886


No 295
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.37  E-value=1.7  Score=38.67  Aligned_cols=85  Identities=16%  Similarity=0.267  Sum_probs=63.3

Q ss_pred             CCCCCcceEEEEEEeCCEEEEEEeccCCCchHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCcEeccCCCCcEEeCCCC
Q 013522           76 VKHKHIVELHEVMASKSKIYFAMDLVKGGELFNKIAKGRLREDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDG  155 (441)
Q Consensus        76 l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~l~~~~~~~~~~qll~aL~ylH~~gi~HrDLkp~NILl~~~~  155 (441)
                      ..||+++.. .+-.+.+.+.+.++.-..+.=+..++  .++....++++.+|+....++  ..=+|--|+|+||+++.++
T Consensus        42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--~~~~~eKlr~l~ni~~l~~~~--~~r~tf~L~P~NL~f~~~~  116 (215)
T 4ann_A           42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--SFTKNEKLRYLLNIKNLEEVN--RTRYTFVLAPDELFFTRDG  116 (215)
T ss_dssp             SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--GSCHHHHHHHHHHGGGGGGGG--GSSEECCCSGGGEEECTTS
T ss_pred             ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--hcCHHHHHHHHHHHHHHHHHh--cCceEEEEecceEEEcCCC
Confidence            368999876 67777777777777665443344443  377888888999888877443  4446778999999999999


Q ss_pred             CeEEeecCcc
Q 013522          156 NLKVTDFGLS  165 (441)
Q Consensus       156 ~vkl~DFGla  165 (441)
                      .+++.--|+-
T Consensus       117 ~p~i~~RGik  126 (215)
T 4ann_A          117 LPIAKTRGLQ  126 (215)
T ss_dssp             CEEESCCEET
T ss_pred             CEEEEEccCc
Confidence            9999988863


No 296
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=83.74  E-value=0.078  Score=53.54  Aligned_cols=64  Identities=9%  Similarity=0.151  Sum_probs=18.3

Q ss_pred             EEeeeecccCceEEEEEEEcCCCcEEEE------EEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 013522           22 ELGRMLGHGTFAKVYLARNLQTGKSMAM------KVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEVMA   89 (441)
Q Consensus        22 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAi------K~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~   89 (441)
                      .+.+.||   ||.||.|........||+      |........ ......+.+|..+++.++|||+++.+.+..
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~-~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS-EKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCcccccccccc-ccccccccccccccccccccccCCCcceEE
Confidence            3455676   999999998765568888      654332221 123345778889999999999999988754


No 297
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=68.77  E-value=85  Score=32.37  Aligned_cols=81  Identities=25%  Similarity=0.356  Sum_probs=48.3

Q ss_pred             ceEEEEEEeCCEEEEEEeccCCCchHHHHhc-CC-----------------CCHHHHHHHHHHHHHHHHHHhhcCcEecc
Q 013522           82 VELHEVMASKSKIYFAMDLVKGGELFNKIAK-GR-----------------LREDVARVYFQQLISAVDFCHSRGVYHRD  143 (441)
Q Consensus        82 v~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~-~~-----------------l~~~~~~~~~~qll~aL~ylH~~gi~HrD  143 (441)
                      ++.|.+.......-+ .|++++.++.+.+.. +.                 ........+.+.++.----.+=.||  +|
T Consensus       402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi--gD  478 (614)
T 3ls8_A          402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV--GD  478 (614)
T ss_dssp             CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC--CC
T ss_pred             eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec--cC
Confidence            456666666555544 467776555544432 11                 0122334444444432222233455  68


Q ss_pred             CCCCcEEeCCCCCeEEeecCcc
Q 013522          144 LKPENLLLDEDGNLKVTDFGLS  165 (441)
Q Consensus       144 Lkp~NILl~~~~~vkl~DFGla  165 (441)
                      =.++|||++.+|.+.=+|||..
T Consensus       479 RH~~NILld~tG~v~HIDFG~~  500 (614)
T 3ls8_A          479 RHLDNLLLTKTGKLFHIDFGYI  500 (614)
T ss_dssp             CCTTSEEECTTSCEEECCCSSC
T ss_pred             CCCcceeEcCCCCEeeeehHHh
Confidence            8999999999999999999976


No 298
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=67.93  E-value=60  Score=34.05  Aligned_cols=24  Identities=42%  Similarity=0.589  Sum_probs=22.6

Q ss_pred             ccCCCCcEEeCCCCCeEEeecCcc
Q 013522          142 RDLKPENLLLDEDGNLKVTDFGLS  165 (441)
Q Consensus       142 rDLkp~NILl~~~~~vkl~DFGla  165 (441)
                      +|-+++|||++.+|.+.=+|||..
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~  574 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYI  574 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSC
T ss_pred             CCCCCcceEEeCCCCEEEEeehhh
Confidence            689999999999999999999975


No 299
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=40.58  E-value=78  Score=30.00  Aligned_cols=136  Identities=13%  Similarity=0.127  Sum_probs=72.3

Q ss_pred             eEEeeeecccCceEEEEEEEcCCCcEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCcceEEEE-------------
Q 013522           21 YELGRMLGHGTFAKVYLARNLQTGKSMAMKVVGKDKVIKVGMMEQIKREISVMKMVKHKHIVELHEV-------------   87 (441)
Q Consensus        21 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~-------------   87 (441)
                      .+.++..-.|+.|.++...   ++..+.||-.  ..+    ..+.+-.++...=.+.-|+..-+.-.             
T Consensus        71 v~~I~~s~~Gstgvff~~t---d~~~~VVK~s--~~l----~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~  141 (342)
T 1cja_A           71 FKGIERSEKGTEGLFFVET---ESGVFIVKRS--TNI----ESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAA  141 (342)
T ss_dssp             EEEEEECCSTTSCEEEEEE---SSCEEEEECC--TTH----HHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHH
T ss_pred             eeEEEeccCCCCCeEEEEe---CCCEEEEeCc--HHH----HHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHH
Confidence            6667777777655554444   5778889943  111    22333334443334555653322110             


Q ss_pred             -E--------EeCCEEEEEEeccCCCchHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC----c-EeccCCCCcEE
Q 013522           88 -M--------ASKSKIYFAMDLVKGGELFNKIAK---GRLREDVARVYFQQLISAVDFCHSRG----V-YHRDLKPENLL  150 (441)
Q Consensus        88 -~--------~~~~~~~lv~E~~~gg~L~~~i~~---~~l~~~~~~~~~~qll~aL~ylH~~g----i-~HrDLkp~NIL  150 (441)
                       .        ...+..+++|||.+|..|...-..   ..+.+...+.+.  -+-+++.+..++    . -+.--.|+|||
T Consensus       142 ~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL  219 (342)
T 1cja_A          142 IDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIM  219 (342)
T ss_dssp             HCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred             hhhhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheE
Confidence             0        012246799999998766543111   113333322211  133455555442    1 11125788999


Q ss_pred             eCCCCC-eEEeecCcccc
Q 013522          151 LDEDGN-LKVTDFGLSAF  167 (441)
Q Consensus       151 l~~~~~-vkl~DFGla~~  167 (441)
                      ++.++. +.++|-+++..
T Consensus       220 ~~~~n~~~~~IDhn~af~  237 (342)
T 1cja_A          220 LSERGATVVPIDSKIIPL  237 (342)
T ss_dssp             EESBTTCEEECSCCCCCC
T ss_pred             EeCCCCeEEEEcCCcccc
Confidence            987554 88999998864


No 300
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=33.57  E-value=60  Score=35.97  Aligned_cols=24  Identities=29%  Similarity=0.530  Sum_probs=22.6

Q ss_pred             ccCCCCcEEeCCCCCeEEeecCcc
Q 013522          142 RDLKPENLLLDEDGNLKVTDFGLS  165 (441)
Q Consensus       142 rDLkp~NILl~~~~~vkl~DFGla  165 (441)
                      +|-.++|||++.+|.+.=+|||..
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~  963 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHI  963 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCC
T ss_pred             CCCCCccEEEecCCCEEEEeehhh
Confidence            799999999999999999999975


No 301
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=30.05  E-value=58  Score=35.57  Aligned_cols=28  Identities=36%  Similarity=0.591  Sum_probs=24.0

Q ss_pred             cCcEeccCCCCcEEeCCCCCeEEeecCccc
Q 013522          137 RGVYHRDLKPENLLLDEDGNLKVTDFGLSA  166 (441)
Q Consensus       137 ~gi~HrDLkp~NILl~~~~~vkl~DFGla~  166 (441)
                      .||  +|-+++|||++.+|.+.=+|||..-
T Consensus       801 LGi--gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          801 LGI--GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             TTC--CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             ccc--cCCCCcceEEecCCCEEEEeehhhh
Confidence            454  7889999999999999999999763


No 302
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=29.14  E-value=55  Score=35.66  Aligned_cols=24  Identities=33%  Similarity=0.559  Sum_probs=22.5

Q ss_pred             ccCCCCcEEeCCCCCeEEeecCcc
Q 013522          142 RDLKPENLLLDEDGNLKVTDFGLS  165 (441)
Q Consensus       142 rDLkp~NILl~~~~~vkl~DFGla  165 (441)
                      +|-.++|||++.+|.+.=+|||..
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~  811 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHF  811 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCC
T ss_pred             CCCCcccEEEecCCCEEEEeehhh
Confidence            788999999999999999999975


No 303
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=25.05  E-value=87  Score=34.62  Aligned_cols=27  Identities=33%  Similarity=0.581  Sum_probs=24.0

Q ss_pred             cCcEeccCCCCcEEeCCCCCeEEeecCcc
Q 013522          137 RGVYHRDLKPENLLLDEDGNLKVTDFGLS  165 (441)
Q Consensus       137 ~gi~HrDLkp~NILl~~~~~vkl~DFGla  165 (441)
                      .||  +|=.++|||++.+|.+.=+|||..
T Consensus       934 Lgi--gDRH~~NILid~tG~v~HIDFG~~  960 (1091)
T 3hhm_A          934 LGI--GDRHNSNIMVKDDGQLFHIDFGHF  960 (1091)
T ss_dssp             HTC--CCCCTTTEEEETTSCEEECCCCCC
T ss_pred             Eee--cCCCCcceEEeCCCCEEEEeehhh
Confidence            455  688999999999999999999986


No 304
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=20.54  E-value=3.7  Score=41.19  Aligned_cols=28  Identities=18%  Similarity=0.170  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 013522           63 MEQIKREISVMKMVKHKHIVELHEVMAS   90 (441)
Q Consensus        63 ~~~~~~Ei~il~~l~hpnIv~l~~~~~~   90 (441)
                      .+.+..|++.+.+++|+|+|++++||.+
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s  350 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRT  350 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcC
Confidence            4578999999999999999999997654


Done!