Your job contains 1 sequence.
>013524
MELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDL
DKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEA
QLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGE
LVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAP
KHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKG
KPKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEEVAAGQEKKE
KKKKKSKKADDERTNGSVEAENEESVKKEKKKRKKQVAEAGGENVEAGEKKKKKRKHSEV
NEEESEVPSKKEKKKKKKNDD
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013524
(441 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2096214 - symbol:AT3G05060 "AT3G05060" species... 1499 1.1e-153 1
TAIR|locus:2181211 - symbol:AT5G27120 "AT5G27120" species... 1486 2.5e-152 1
UNIPROTKB|F1N218 - symbol:NOP58 "Uncharacterized protein"... 1079 3.4e-109 1
UNIPROTKB|Q9Y2X3 - symbol:NOP58 "Nucleolar protein 58" sp... 1078 4.3e-109 1
UNIPROTKB|E1BUS2 - symbol:NOP58 "Uncharacterized protein"... 1076 7.0e-109 1
MGI|MGI:1933184 - symbol:Nop58 "NOP58 ribonucleoprotein" ... 1069 3.9e-108 1
RGD|620484 - symbol:Nop58 "NOP58 ribonucleoprotein" speci... 1064 1.3e-107 1
POMBASE|SPAC23G3.06 - symbol:SPAC23G3.06 "U3 snoRNP prote... 1054 1.5e-106 1
UNIPROTKB|I3LDD2 - symbol:NOP58 "Uncharacterized protein"... 1046 1.1e-105 1
SGD|S000005837 - symbol:NOP58 "Protein involved in pre-rR... 1012 4.2e-102 1
FB|FBgn0026196 - symbol:nop5 "nop5" species:7227 "Drosoph... 1011 5.4e-102 1
UNIPROTKB|G4MPA1 - symbol:MGG_07008 "Nucleolar protein no... 988 1.5e-99 1
ASPGD|ASPL0000037939 - symbol:nop58 species:162425 "Emeri... 965 4.1e-97 1
DICTYBASE|DDB_G0268098 - symbol:nop58 "nucleolar protein ... 926 5.5e-93 1
WB|WBGene00020915 - symbol:nol-5 species:6239 "Caenorhabd... 925 7.0e-93 1
GENEDB_PFALCIPARUM|PF10_0085 - symbol:PF10_0085 "nucleola... 878 6.7e-88 1
UNIPROTKB|Q8IJV7 - symbol:PF10_0085 "Nucleolar protein NO... 878 6.7e-88 1
TAIR|locus:2087755 - symbol:AT3G12860 species:3702 "Arabi... 763 5.9e-78 2
TAIR|locus:2205270 - symbol:NOP56 "homolog of nucleolar p... 776 4.3e-77 1
MGI|MGI:1914384 - symbol:Nop56 "NOP56 ribonucleoprotein" ... 745 1.4e-76 2
ZFIN|ZDB-GENE-040109-1 - symbol:nop56 "NOP56 ribonucleopr... 749 3.1e-74 1
RGD|1308892 - symbol:Nop56 "NOP56 ribonucleoprotein" spec... 748 4.0e-74 1
UNIPROTKB|Q4KLK7 - symbol:Nol5a "RCG26515, isoform CRA_c"... 748 4.0e-74 1
UNIPROTKB|F1MW06 - symbol:NOP56 "Nucleolar protein 56" sp... 746 6.5e-74 1
UNIPROTKB|Q3SZ63 - symbol:NOP56 "Nucleolar protein 56" sp... 746 6.5e-74 1
UNIPROTKB|E2QU53 - symbol:NOP56 "Uncharacterized protein"... 744 1.1e-73 1
UNIPROTKB|O00567 - symbol:NOP56 "Nucleolar protein 56" sp... 743 1.4e-73 1
SGD|S000004187 - symbol:NOP56 "Nucleolar protein componen... 740 2.8e-73 1
POMBASE|SPBC646.10c - symbol:SPBC646.10c "U3 snoRNP prote... 728 5.3e-72 1
FB|FBgn0038964 - symbol:Nop56 "Nop56" species:7227 "Droso... 726 8.6e-72 1
CGD|CAL0000142 - symbol:SIK1 species:5476 "Candida albica... 711 3.3e-70 1
UNIPROTKB|Q5ACS3 - symbol:SIK1 "Putative uncharacterized ... 711 3.3e-70 1
ASPGD|ASPL0000040023 - symbol:AN10352 species:162425 "Eme... 705 1.4e-69 1
WB|WBGene00010627 - symbol:K07C5.4 species:6239 "Caenorha... 691 4.4e-68 1
DICTYBASE|DDB_G0285679 - symbol:nol5a "NOP5 family protei... 650 9.7e-64 1
UNIPROTKB|G4N2E5 - symbol:MGG_07915 "Uncharacterized prot... 643 5.4e-63 1
UNIPROTKB|H9L0K4 - symbol:H9L0K4 "Uncharacterized protein... 565 9.9e-55 1
UNIPROTKB|Q58105 - symbol:MJ0694 "Uncharacterized NOP5 fa... 485 3.0e-46 1
UNIPROTKB|Q97ZH3 - symbol:SSO0939 "Pre mRNA splicing prot... 468 1.9e-44 1
ZFIN|ZDB-GENE-040426-1561 - symbol:prpf31 "PRP31 pre-mRNA... 325 5.4e-29 1
UNIPROTKB|F1RNI3 - symbol:PRPF31 "Uncharacterized protein... 323 8.0e-29 1
MGI|MGI:1916238 - symbol:Prpf31 "PRP31 pre-mRNA processin... 323 8.0e-29 1
UNIPROTKB|E7ESA8 - symbol:PRPF31 "U4/U6 small nuclear rib... 319 1.2e-28 1
UNIPROTKB|Q6NVP6 - symbol:prpf31 "U4/U6 small nuclear rib... 321 1.3e-28 1
POMBASE|SPBC119.13c - symbol:prp31 "U4/U6 x U5 tri-snRNP ... 304 2.2e-28 2
UNIPROTKB|E1BM48 - symbol:PRPF31 "Uncharacterized protein... 319 2.3e-28 1
UNIPROTKB|F1PKI0 - symbol:PRPF31 "Uncharacterized protein... 319 2.3e-28 1
UNIPROTKB|Q8WWY3 - symbol:PRPF31 "U4/U6 small nuclear rib... 319 2.3e-28 1
FB|FBgn0036487 - symbol:Prp31 species:7227 "Drosophila me... 319 2.4e-28 1
UNIPROTKB|Q5U5C5 - symbol:prpf31 "U4/U6 small nuclear rib... 316 5.0e-28 1
UNIPROTKB|E7EVX8 - symbol:PRPF31 "U4/U6 small nuclear rib... 306 6.5e-27 1
WB|WBGene00022458 - symbol:prp-31 species:6239 "Caenorhab... 281 4.5e-24 1
TAIR|locus:2195698 - symbol:emb1220 "AT1G60170" species:3... 277 1.1e-23 1
UNIPROTKB|E7EN72 - symbol:PRPF31 "U4/U6 small nuclear rib... 269 2.3e-23 1
UNIPROTKB|E7ESX0 - symbol:PRPF31 "U4/U6 small nuclear rib... 259 2.6e-22 1
DICTYBASE|DDB_G0289595 - symbol:prpf31 "pre-mRNA processi... 255 5.0e-20 1
UNIPROTKB|E7EU94 - symbol:PRPF31 "U4/U6 small nuclear rib... 236 1.0e-19 1
GENEDB_PFALCIPARUM|PFD0450c - symbol:PFD0450c "pre-mrna s... 253 1.6e-19 1
UNIPROTKB|C0H4A0 - symbol:PFD0450c "Pre-mRNA splicing fac... 253 1.6e-19 1
RGD|1305832 - symbol:Prpf31 "PRP31 pre-mRNA processing fa... 189 2.3e-14 1
ASPGD|ASPL0000059636 - symbol:AN1260 species:162425 "Emer... 202 2.0e-13 1
SGD|S000003323 - symbol:PRP31 "Splicing factor" species:4... 198 5.1e-13 1
>TAIR|locus:2096214 [details] [associations]
symbol:AT3G05060 "AT3G05060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] Pfam:PF01798 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0042254
EMBL:AC009177 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310 OMA:DAHEQLA
ProtClustDB:CLSN2684456 EMBL:AF302491 EMBL:AF412080 IPI:IPI00543036
RefSeq:NP_187157.1 UniGene:At.16937 ProteinModelPortal:Q9MAB3
SMR:Q9MAB3 STRING:Q9MAB3 PaxDb:Q9MAB3 PRIDE:Q9MAB3
EnsemblPlants:AT3G05060.1 GeneID:819668 KEGG:ath:AT3G05060
TAIR:At3g05060 InParanoid:Q9MAB3 PhylomeDB:Q9MAB3
Genevestigator:Q9MAB3 Uniprot:Q9MAB3
Length = 533
Score = 1499 (532.7 bits), Expect = 1.1e-153, P = 1.1e-153
Identities = 295/351 (84%), Positives = 325/351 (92%)
Query: 1 MELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDL 60
MEL+RGVRSQ TELISGL QDL PMSLGLSHSL+RYKLKFS+DKVDTMIIQAIGLLDDL
Sbjct: 112 MELLRGVRSQFTELISGLGDQDLAPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDL 171
Query: 61 DKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEA 120
DKELNTYAMRVREWYGWHFPELAKII DNILYAK+VKLMG+R NAAKLDFSEIL +E+EA
Sbjct: 172 DKELNTYAMRVREWYGWHFPELAKIISDNILYAKSVKLMGNRVNAAKLDFSEILADEIEA 231
Query: 121 QLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGE 180
LK+AA+ISMGTEVSDLDLL+I+ELCDQVLSL+EYRAQLYDYLKSRMNT+APNLTALVGE
Sbjct: 232 DLKDAAVISMGTEVSDLDLLHIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGE 291
Query: 181 LVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAP 240
LVGARLI+HGGSLLNL+KQPGSTVQILGAEKALFRALKTKHATPKYGLI+HASLVGQAAP
Sbjct: 292 LVGARLISHGGSLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASLVGQAAP 351
Query: 241 KHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKG 300
KHKGKISRSLA+KT LAIR DALGD QDN+MGLENRAKLEARLRNLEGK+LGR +GS+KG
Sbjct: 352 KHKGKISRSLAAKTVLAIRVDALGDSQDNTMGLENRAKLEARLRNLEGKDLGRLSGSSKG 411
Query: 301 KPKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEE 351
KPKIEVY+KD+K G G +IT AKTYN AADS+LG E +A ++ K ++
Sbjct: 412 KPKIEVYNKDKKMGSGGLITPAKTYNTAADSLLG--ETSAKSEEPSKKKDK 460
>TAIR|locus:2181211 [details] [associations]
symbol:AT5G27120 "AT5G27120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
Pfam:PF01798 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005730 GO:GO:0042254 EMBL:AF007271 eggNOG:COG1498
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K14565
HOGENOM:HOG000196310 OMA:DLRTTPK EMBL:AF302490 EMBL:AY074281
EMBL:AY096684 EMBL:BT002060 IPI:IPI00520435 PIR:T01807
RefSeq:NP_198064.1 UniGene:At.10285 UniGene:At.55031
ProteinModelPortal:O04658 SMR:O04658 STRING:O04658 PaxDb:O04658
PRIDE:O04658 EnsemblPlants:AT5G27120.1 GeneID:832770
KEGG:ath:AT5G27120 TAIR:At5g27120 InParanoid:O04658
PhylomeDB:O04658 ProtClustDB:CLSN2684456 Genevestigator:O04658
Uniprot:O04658
Length = 533
Score = 1486 (528.2 bits), Expect = 2.5e-152, P = 2.5e-152
Identities = 291/333 (87%), Positives = 318/333 (95%)
Query: 1 MELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDL 60
MEL+RG+RSQLTELISGL QDL PMSLGLSHSL+RYKLKFS+DKVDTMIIQAIGLLDDL
Sbjct: 111 MELLRGIRSQLTELISGLGDQDLGPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDL 170
Query: 61 DKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEA 120
DKELNTYAMRVREW+GWHFPELAKI+QDNILYAKAVKLMG+R NAAKLDFSEIL +E+EA
Sbjct: 171 DKELNTYAMRVREWFGWHFPELAKIVQDNILYAKAVKLMGNRINAAKLDFSEILADEIEA 230
Query: 121 QLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGE 180
+LKEAA+ISMGTEVSDLDLL+I+ELCDQVLSLAEYRAQLYDYLKSRMNT+APNLTALVGE
Sbjct: 231 ELKEAAVISMGTEVSDLDLLHIRELCDQVLSLAEYRAQLYDYLKSRMNTIAPNLTALVGE 290
Query: 181 LVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAP 240
LVGARLI+HGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLI+HAS+VGQAAP
Sbjct: 291 LVGARLISHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVVGQAAP 350
Query: 241 KHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKG 300
K+KGKISRSLA+K+ LAIR DALGD QDN+MG+ENR KLEARLR LEGK+LGR +GSAKG
Sbjct: 351 KNKGKISRSLAAKSVLAIRCDALGDSQDNTMGVENRLKLEARLRTLEGKDLGRLSGSAKG 410
Query: 301 KPKIEVYDKDRKKGPGAMITAAKTYNPAADSIL 333
KPKIEVYDKD+KKG G +IT AKTYN AADS+L
Sbjct: 411 KPKIEVYDKDKKKGSGGLITPAKTYNTAADSLL 443
>UNIPROTKB|F1N218 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 CTD:51602 OMA:DAHEQLA GeneTree:ENSGT00550000074998
EMBL:DAAA02005606 EMBL:DAAA02005607 IPI:IPI00711083
RefSeq:NP_001179886.1 UniGene:Bt.45900 PRIDE:F1N218
Ensembl:ENSBTAT00000007254 GeneID:507155 KEGG:bta:507155
NextBio:20867927 Uniprot:F1N218
Length = 529
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 213/332 (64%), Positives = 257/332 (77%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
ELMRG+RSQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLD
Sbjct: 114 ELMRGIRSQMDGLIPGVEPREMTAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLD 173
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELN Y MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE+LPEEVEA+
Sbjct: 174 KELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAQLSELLPEEVEAE 233
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K AA ISMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGEL
Sbjct: 234 VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGEL 293
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ +PK
Sbjct: 294 VGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPK 353
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
HKGKISR LA+KT LAIRYDA G+ ++MG+ENRAKLEARLR LE + + + +G+ K
Sbjct: 354 HKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKAL 413
Query: 302 PKIEVYDKDRKKGPGAMITAAKTYNPAADSIL 333
K E Y+ + KTY+P+ DS L
Sbjct: 414 AKAEKYEHKSE---------VKTYDPSGDSTL 436
>UNIPROTKB|Q9Y2X3 [details] [associations]
symbol:NOP58 "Nucleolar protein 58" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IDA;TAS] [GO:0016049
"cell growth" evidence=TAS] [GO:0006364 "rRNA processing"
evidence=TAS] [GO:0006608 "snRNP protein import into nucleus"
evidence=ISS] [GO:0030515 "snoRNA binding" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IDA] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070761 "pre-snoRNP
complex" evidence=IDA] [GO:0015030 "Cajal body" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Pfam:PF01798 GO:GO:0005737 GO:GO:0016049
GO:GO:0030515 GO:GO:0015030 GO:GO:0070761 GO:GO:0006364
EMBL:AC064836 GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310
EMBL:AF123534 EMBL:AF263608 EMBL:BC032592 EMBL:BC009306
EMBL:AL117554 EMBL:AF161469 IPI:IPI00006379 PIR:T17299
RefSeq:NP_057018.1 UniGene:Hs.471104 ProteinModelPortal:Q9Y2X3
SMR:Q9Y2X3 IntAct:Q9Y2X3 STRING:Q9Y2X3 PhosphoSite:Q9Y2X3
DMDM:17380155 SWISS-2DPAGE:Q9Y2X3 PaxDb:Q9Y2X3 PeptideAtlas:Q9Y2X3
PRIDE:Q9Y2X3 DNASU:51602 Ensembl:ENST00000264279 GeneID:51602
KEGG:hsa:51602 UCSC:uc002uzb.3 CTD:51602 GeneCards:GC02P203130
HGNC:HGNC:29926 HPA:HPA018472 HPA:HPA021062 neXtProt:NX_Q9Y2X3
PharmGKB:PA164724092 InParanoid:Q9Y2X3 OMA:DAHEQLA
OrthoDB:EOG451DQQ PhylomeDB:Q9Y2X3 ChiTaRS:NOP58 GenomeRNAi:51602
NextBio:55479 ArrayExpress:Q9Y2X3 Bgee:Q9Y2X3 Genevestigator:Q9Y2X3
GermOnline:ENSG00000055044 GO:GO:0006608 Uniprot:Q9Y2X3
Length = 529
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 213/332 (64%), Positives = 257/332 (77%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
ELMRG+RSQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLD
Sbjct: 114 ELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLD 173
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELN Y MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE+LPEEVEA+
Sbjct: 174 KELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAE 233
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K AA ISMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGEL
Sbjct: 234 VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGEL 293
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ +PK
Sbjct: 294 VGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPK 353
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
HKGKISR LA+KT LAIRYDA G+ ++MG+ENRAKLEARLR LE + + + +G+ K
Sbjct: 354 HKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKAL 413
Query: 302 PKIEVYDKDRKKGPGAMITAAKTYNPAADSIL 333
K E Y+ + KTY+P+ DS L
Sbjct: 414 AKTEKYEHKSE---------VKTYDPSGDSTL 436
>UNIPROTKB|E1BUS2 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0070761 "pre-snoRNP complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 CTD:51602 OMA:DAHEQLA GeneTree:ENSGT00550000074998
EMBL:AADN02019867 EMBL:AADN02019868 IPI:IPI00582637
RefSeq:XP_421942.1 UniGene:Gga.12235 PRIDE:E1BUS2
Ensembl:ENSGALT00000013776 GeneID:424087 KEGG:gga:424087
NextBio:20826466 Uniprot:E1BUS2
Length = 527
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 223/354 (62%), Positives = 263/354 (74%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
ELMRG+RSQ+ LI+GL +++ M LGL+HSLSRYKLKFS DKVDTMI+QAI LLDDLD
Sbjct: 115 ELMRGIRSQIEGLITGLPSREMAAMCLGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLD 174
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELN Y MR REWYGWHFPEL KII DN+ Y K V+ +GDR N A D S+ILPEE+E
Sbjct: 175 KELNNYIMRCREWYGWHFPELGKIITDNLTYCKCVRKVGDRRNFASSDVSDILPEEIEED 234
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K AA ISMGTEVS+ D+ NI LCDQV+ ++EYR QLYDYLK+RM +APNLT +VGEL
Sbjct: 235 VKAAAEISMGTEVSEEDINNIIHLCDQVIEISEYRTQLYDYLKNRMMAIAPNLTVMVGEL 294
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSLLNLAK P STVQILGAEKALFRALKTK TPK+GLIYHASLVGQ K
Sbjct: 295 VGARLIAHAGSLLNLAKHPASTVQILGAEKALFRALKTKRDTPKFGLIYHASLVGQTTAK 354
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
+KGKISR LA+KTAL IRYDALG+ MG ENR K+E RLR+LE + + R +G+ K
Sbjct: 355 NKGKISRMLAAKTALTIRYDALGEDTSAEMGAENRLKVETRLRHLEERGIRRISGTGKAL 414
Query: 302 PKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEEVAAG 355
+ DK + K + K Y+P+ DS L A SK + + +EE AG
Sbjct: 415 ARA---DKYQNK------SEIKVYDPSGDSTLP----AVSKKRKIQEVEEQEAG 455
>MGI|MGI:1933184 [details] [associations]
symbol:Nop58 "NOP58 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO;IC] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0006608 "snRNP protein
import into nucleus" evidence=ISO] [GO:0015030 "Cajal body"
evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0030519 "snoRNP binding" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0070761 "pre-snoRNP complex"
evidence=ISO] MGI:MGI:1933184 Pfam:PF01798 GO:GO:0005737
GO:GO:0005730 GO:GO:0030515 GO:GO:0042254 GO:GO:0015030
GO:GO:0030519 GO:GO:0070761 GO:GO:0005732 eggNOG:COG1498
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K14565
HOGENOM:HOG000196310 CTD:51602 OMA:DAHEQLA OrthoDB:EOG451DQQ
ChiTaRS:NOP58 GO:GO:0006608 EMBL:AF053232 EMBL:AK044216
EMBL:AK133959 EMBL:AK134286 EMBL:BC076604 EMBL:BC085135
IPI:IPI00463468 RefSeq:NP_061356.2 UniGene:Mm.220367
ProteinModelPortal:Q6DFW4 SMR:Q6DFW4 IntAct:Q6DFW4 STRING:Q6DFW4
PhosphoSite:Q6DFW4 PaxDb:Q6DFW4 PRIDE:Q6DFW4
Ensembl:ENSMUST00000027174 GeneID:55989 KEGG:mmu:55989
UCSC:uc007bdy.1 GeneTree:ENSGT00550000074998 InParanoid:Q6DFW4
NextBio:311710 Bgee:Q6DFW4 CleanEx:MM_NOL5 Genevestigator:Q6DFW4
Uniprot:Q6DFW4
Length = 536
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 214/349 (61%), Positives = 261/349 (74%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
ELMRG+RSQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLD
Sbjct: 114 ELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLD 173
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELN Y MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE L EEVEA+
Sbjct: 174 KELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASASLSEFLSEEVEAE 233
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K AA ISMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGEL
Sbjct: 234 VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGEL 293
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ++PK
Sbjct: 294 VGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQSSPK 353
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
HKGKISR LA+KT LAIRYDA G+ ++MG+ENRAKLEARLR LE + + + +G+ K
Sbjct: 354 HKGKISRMLAAKTVLAIRYDAFGEDSSSAMGIENRAKLEARLRILEDRGIRKISGTGKAL 413
Query: 302 PKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPME 350
K E Y+ + KTY+P+ DS L ++ +K E
Sbjct: 414 AKAEKYEHKSE---------VKTYDPSGDSTLPTCSKKRKIEEVDKEDE 453
>RGD|620484 [details] [associations]
symbol:Nop58 "NOP58 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0000154 "rRNA modification" evidence=NAS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006608 "snRNP protein import into nucleus"
evidence=IDA] [GO:0008649 "rRNA methyltransferase activity"
evidence=NAS] [GO:0015030 "Cajal body" evidence=IEA;ISO]
[GO:0030515 "snoRNA binding" evidence=IEA;ISO] [GO:0030519 "snoRNP
binding" evidence=TAS] [GO:0031167 "rRNA methylation" evidence=NAS]
[GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0070761
"pre-snoRNP complex" evidence=IEA;ISO] EMBL:AF194371 Pfam:PF01798
RGD:620484 GO:GO:0005737 GO:GO:0005730 GO:GO:0051082 GO:GO:0030515
GO:GO:0015030 GO:GO:0030519 GO:GO:0070761 GO:GO:0005732
GO:GO:0008649 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310 CTD:51602
GO:GO:0006608 GeneTree:ENSGT00550000074998 EMBL:AF069782
IPI:IPI00214536 RefSeq:NP_068522.1 UniGene:Rn.43930
ProteinModelPortal:Q9QZ86 STRING:Q9QZ86 PhosphoSite:Q9QZ86
PRIDE:Q9QZ86 Ensembl:ENSRNOT00000022676 GeneID:60373 KEGG:rno:60373
UCSC:RGD:620484 InParanoid:Q9QZ86 NextBio:612047
ArrayExpress:Q9QZ86 Genevestigator:Q9QZ86
GermOnline:ENSRNOG00000016486 Uniprot:Q9QZ86
Length = 534
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 214/349 (61%), Positives = 259/349 (74%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
ELMRG+RSQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLD
Sbjct: 114 ELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLD 173
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELN Y MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE L EEVEA+
Sbjct: 174 KELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASATLSEFLSEEVEAE 233
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K AA ISMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGEL
Sbjct: 234 VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGEL 293
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ +PK
Sbjct: 294 VGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPK 353
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
HKGKISR LA+KT LAIRYDA G+ ++MG ENRAKLEARLR LE + + + +G+ K
Sbjct: 354 HKGKISRMLAAKTVLAIRYDAFGEDSSSAMGAENRAKLEARLRILEDRGIRKISGTGKAL 413
Query: 302 PKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPME 350
K E Y+ + KTY+P+ DS L ++ +K E
Sbjct: 414 AKAEKYEHKSE---------VKTYDPSGDSTLPTCSKKRKIEEVDKEDE 453
>POMBASE|SPAC23G3.06 [details] [associations]
symbol:SPAC23G3.06 "U3 snoRNP protein Nop58 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0030515 "snoRNA binding"
evidence=ISM] [GO:0032040 "small-subunit processome" evidence=ISO]
PomBase:SPAC23G3.06 Pfam:PF01798 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0030515 GO:GO:0006364 GO:GO:0032040
eggNOG:COG1498 HOGENOM:HOG000196309 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 OrthoDB:EOG4BZRB2
PIR:T50180 RefSeq:NP_593106.1 ProteinModelPortal:Q9P7S7
IntAct:Q9P7S7 STRING:Q9P7S7 EnsemblFungi:SPAC23G3.06.1
GeneID:2541814 KEGG:spo:SPAC23G3.06 OMA:SHILARY NextBio:20802902
Uniprot:Q9P7S7
Length = 508
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 209/292 (71%), Positives = 245/292 (83%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
+L RG+R L+ LISGLA DL MSLGLSHSLSR+KLKFS DKVDTMI+QAI LLDDLD
Sbjct: 115 DLYRGIREHLSSLISGLAPSDLNAMSLGLSHSLSRHKLKFSPDKVDTMIVQAIALLDDLD 174
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELNTYAMRVREWYGWHFPE+ KIIQDN+ YA+ +K MG R+ ++ DFS+ILPEE+EA
Sbjct: 175 KELNTYAMRVREWYGWHFPEMGKIIQDNLAYARVIKAMGMRTKCSETDFSDILPEEIEAT 234
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
LK AA ISMGTE+++ DL NI L DQVL LA YRAQL +YL++RM +APNLTALVGEL
Sbjct: 235 LKSAAEISMGTEITEEDLDNIVMLADQVLELASYRAQLSEYLRNRMQAIAPNLTALVGEL 294
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSL+NLAKQP ST+QILGAEKALFRALKTKH+TPKYGLIYHASLVGQA K
Sbjct: 295 VGARLIAHAGSLMNLAKQPASTIQILGAEKALFRALKTKHSTPKYGLIYHASLVGQANSK 354
Query: 242 HKGKISRSLASKTALAIRYDALGDGQ--DNSMGLENRAKLEARLRNLEGKEL 291
+KGKI+R LA+K AL++R DAL D + ++GLENR ++E RLR+LEG +L
Sbjct: 355 NKGKIARVLATKAALSLRVDALSDKDTTNGNIGLENRIRVENRLRSLEGGKL 406
>UNIPROTKB|I3LDD2 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
OMA:DAHEQLA GeneTree:ENSGT00550000074998 EMBL:CU466450
Ensembl:ENSSSCT00000029321 Uniprot:I3LDD2
Length = 416
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 204/302 (67%), Positives = 242/302 (80%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
ELMRG+RSQ+ LI G+ +++ M LGL+HSLSRY+LKFSADKVDTMI+QAI LLDDLD
Sbjct: 114 ELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLD 173
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELN Y MR REWYGWHFPEL KII DN+ Y K ++ +GDR N A SE+LPEEVEA+
Sbjct: 174 KELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAE 233
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K AA ISMGTEVS+ D+ NI LC QV+ ++EYR QLY+YL++RM +APN+T +VGEL
Sbjct: 234 VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGEL 293
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSLLNLAK STVQILGAEKALFRALK++ TPKYGLIYHASLVGQ +PK
Sbjct: 294 VGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPK 353
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
HKGKISR LA+KT LAIRYDA G+ ++MG+ENRAKLEARLR LE + + + KG
Sbjct: 354 HKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIKENKWNRKGI 413
Query: 302 PK 303
K
Sbjct: 414 SK 415
>SGD|S000005837 [details] [associations]
symbol:NOP58 "Protein involved in pre-rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0031428 "box C/D snoRNP
complex" evidence=IDA;IPI] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
SGD:S000005837 Pfam:PF01798 EMBL:BK006948 GO:GO:0030686
GO:GO:0017069 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 EMBL:X90565
GO:GO:0000480 GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310
OrthoDB:EOG4BZRB2 GO:GO:0006608 GeneTree:ENSGT00550000074998
EMBL:AF056070 EMBL:Z75217 PIR:S58322 RefSeq:NP_014955.1
ProteinModelPortal:Q12499 SMR:Q12499 DIP:DIP-5843N IntAct:Q12499
MINT:MINT-658431 STRING:Q12499 PaxDb:Q12499 PeptideAtlas:Q12499
PRIDE:Q12499 EnsemblFungi:YOR310C GeneID:854487 KEGG:sce:YOR310C
CYGD:YOR310c OMA:DLRTTPK NextBio:976810 Genevestigator:Q12499
GermOnline:YOR310C Uniprot:Q12499
Length = 511
Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
Identities = 203/353 (57%), Positives = 264/353 (74%)
Query: 1 MELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDL 60
+++ R ++ L EL+ G++ DL MSLGL+HS+ R+KLKFSADKVD MIIQAI LLDDL
Sbjct: 114 LDIYRAIKEYLPELLPGMSDNDLSKMSLGLAHSIGRHKLKFSADKVDVMIIQAIALLDDL 173
Query: 61 DKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEA 120
DKELNTYAMR +EWYGWHFPELAKI+ D++ YA+ + MG RS A++ D SEILPEE+E
Sbjct: 174 DKELNTYAMRCKEWYGWHFPELAKIVTDSVAYARIILTMGIRSKASETDLSEILPEEIEE 233
Query: 121 QLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGE 180
++K AA +SMGTE++ DL NI L +Q++ A YR QL +YL +RM +APNLT LVGE
Sbjct: 234 RVKTAAEVSMGTEITQTDLDNINALAEQIVEFAAYREQLSNYLSARMKAIAPNLTQLVGE 293
Query: 181 LVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAP 240
LVGARLIAH GSL++LAK P ST+QILGAEKALFRALKTKH TPKYGL+YHASLVGQA
Sbjct: 294 LVGARLIAHSGSLISLAKSPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQATG 353
Query: 241 KHKGKISRSLASKTALAIRYDALGDGQDNS--MGLENRAKLEARLRNLEGKELGRAAGSA 298
K+KGKI+R LA+K A+++RYDAL + +D+S +GLE+RAK+E RL LEG++L
Sbjct: 354 KNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLESRAKVENRLSQLEGRDL------- 406
Query: 299 KGKPKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEE 351
+ PK+ ++ KK +T A+ YN AD+ ++ + DDEE+ +E
Sbjct: 407 RTTPKVV---REAKK---VEMTEARAYNADADTAKAASDSESDSDDEEEEKKE 453
>FB|FBgn0026196 [details] [associations]
symbol:nop5 "nop5" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01798 GO:GO:0005730 EMBL:AE014134 GO:GO:0006364
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 KO:K14565 OMA:DAHEQLA
GeneTree:ENSGT00550000074998 FlyBase:FBgn0026196 EMBL:AY061401
EMBL:FM245448 EMBL:FM245453 RefSeq:NP_477412.1 UniGene:Dm.3320
SMR:Q9VM69 IntAct:Q9VM69 MINT:MINT-335173 STRING:Q9VM69
EnsemblMetazoa:FBtr0079369 GeneID:33966 KEGG:dme:Dmel_CG10206
UCSC:CG10206-RA CTD:33966 InParanoid:Q9VM69 GenomeRNAi:33966
NextBio:786179 Uniprot:Q9VM69
Length = 511
Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
Identities = 204/351 (58%), Positives = 257/351 (73%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
ELMR +R Q L+ GL +++ M+LGL+HSLSRYKLKFS DK+DTMI+QA LLDDLD
Sbjct: 115 ELMRCIRQQADSLLGGLPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLD 174
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELN Y MR REWYGWHFPEL KII DNI + K +KL+G R N A D S+ILPE+VE +
Sbjct: 175 KELNNYMMRAREWYGWHFPELGKIITDNIAFVKTIKLVGTRDNMATSDLSDILPEDVEEK 234
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+KEAA ISMGTE+S+ D+LNI+ LCD+++S+ +YR LYDYLK+RM +APNLT LVG+
Sbjct: 235 VKEAAEISMGTEISEEDVLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDT 294
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSL+NLAK P STVQILGAEKALFRALKTK TPKYGLIYHA LVGQA+ K
Sbjct: 295 VGARLIAHAGSLINLAKHPSSTVQILGAEKALFRALKTKKDTPKYGLIYHAQLVGQASQK 354
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
+KGK+SRSLA+K +LA R DA G+ +G ++ KLE+RLR LE L + +G+ K K
Sbjct: 355 NKGKMSRSLAAKASLATRVDAFGEEATFELGAAHKVKLESRLRLLEEGNLRKLSGTGKAK 414
Query: 302 PKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAA-SKDDEEKPMEE 351
K E Y + TY P AD+ L + + S+ +++ P+++
Sbjct: 415 AKFEKYQAKSE---------VFTYQPEADNTLNVKKKRKHSESEQQTPVKK 456
>UNIPROTKB|G4MPA1 [details] [associations]
symbol:MGG_07008 "Nucleolar protein nop-58" species:242507
"Magnaporthe oryzae 70-15" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030515 "snoRNA binding"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
Pfam:PF01798 GO:GO:0005730 GO:GO:0030515 EMBL:CM001231
GO:GO:0030686 GO:GO:0006364 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 GO:GO:0005732 GO:GO:0031428
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 KO:K14565
RefSeq:XP_003709766.1 ProteinModelPortal:G4MPA1
EnsemblFungi:MGG_07008T0 GeneID:2685181 KEGG:mgr:MGG_07008
Uniprot:G4MPA1
Length = 599
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 212/367 (57%), Positives = 263/367 (71%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
+L RG+R+ L++LI G+ ++ + MSLGLSHSLSR+KL+FSADKVD MIIQAI LLDDLD
Sbjct: 119 DLYRGIRTHLSDLIPGILPENFKTMSLGLSHSLSRHKLRFSADKVDVMIIQAINLLDDLD 178
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELNTYAMRV+EWYGWHFPEL KI+ DN+ YA+ + +G RSNA K+D SEILPEE+E
Sbjct: 179 KELNTYAMRVKEWYGWHFPELGKILNDNLAYARVILTLGMRSNATKVDLSEILPEEIETA 238
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K AA +SMGTE+S+ DL NI L +QV+S +EYRAQL YL +RM +AP+LT LVG L
Sbjct: 239 VKAAADLSMGTEISEEDLENITLLAEQVVSYSEYRAQLSSYLDARMRAIAPSLTELVGFL 298
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSL+NLAK PGST+QILGAEKALFRALKTKHATPKYGLIYHASLVGQA K
Sbjct: 299 VGARLIAHAGSLMNLAKNPGSTIQILGAEKALFRALKTKHATPKYGLIYHASLVGQATGK 358
Query: 242 HKGKISRSLASKTALAIRYDALG---DGQDNS------MGLENRAKLEARLRNLEGKEL- 291
+KGKI+R LA+K AL +R DAL DG++ G RAK+E+ LR LEGK +
Sbjct: 359 NKGKIARQLAAKAALGVRSDALTEFKDGEEADEEARAVFGATQRAKVESNLRRLEGKPIL 418
Query: 292 --GRAAG-SAKGKPKIEVYD-KDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEK 347
G G + K P +D K+ +K A +A++ + + + K E
Sbjct: 419 AKGVTVGPNGKAAPAPSKWDVKEARKYNVDADGLAGNEPASAETPVKEFKKKSKKAKEPS 478
Query: 348 PMEEVAA 354
P EE A+
Sbjct: 479 PDEEDAS 485
>ASPGD|ASPL0000037939 [details] [associations]
symbol:nop58 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
Pfam:PF01798 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 RefSeq:XP_660771.1
ProteinModelPortal:Q5B8G3 STRING:Q5B8G3
EnsemblFungi:CADANIAT00009903 GeneID:2873782 KEGG:ani:AN3167.2
HOGENOM:HOG000196310 OMA:LNDNIAY OrthoDB:EOG4BZRB2 Uniprot:Q5B8G3
Length = 586
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 201/340 (59%), Positives = 247/340 (72%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
++ R +R L LI GL QD+ MSLGLSHSL+R+KLKFS DK+DTMI+QAIGLLDDLD
Sbjct: 117 DIYRAIREHLPTLIPGLLPQDMSTMSLGLSHSLARHKLKFSPDKIDTMIVQAIGLLDDLD 176
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELN YAMRV+EWYGWHFPELAKI+ DNI Y++ V MG RSN D +EILPEE+EA
Sbjct: 177 KELNNYAMRVKEWYGWHFPELAKILNDNIAYSRLVLKMGMRSNFENADLAEILPEEIEAA 236
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K AA SMGTE+S+ DL NI+ L +QV+ +EYR+QL Y+ +RMN +APNLTALVG+L
Sbjct: 237 VKAAADRSMGTEISEDDLENIQALAEQVVGFSEYRSQLAGYITARMNAIAPNLTALVGDL 296
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLIAH GSL NL+K P ST+QILGAEKALFRALKTKH TPKYGLIYHASL+GQA K
Sbjct: 297 VGARLIAHAGSLTNLSKSPASTLQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGK 356
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDN-------SMGLENRAKLEARLRNLEGKELGRA 294
+KGK++R LA+K +L +R DAL + D+ ++G E R LE +L LEGK L
Sbjct: 357 NKGKMARVLAAKASLGLRVDALAEWDDDVTEEDKAALGTEARFNLERKLAALEGKPL--- 413
Query: 295 AGSAKGKPK-IEVYDKDRKKGPGAM-ITAAKTYNPAADSI 332
KP+ + + PG I A+ YNP AD++
Sbjct: 414 ------KPRGVAIGPDGASAQPGKFNINEARKYNPDADAV 447
>DICTYBASE|DDB_G0268098 [details] [associations]
symbol:nop58 "nucleolar protein 58" species:44689
"Dictyostelium discoideum" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0268098 Pfam:PF01798
GenomeReviews:CM000150_GR GO:GO:0005730 EMBL:AAFI02000003
GO:GO:0042254 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 RefSeq:XP_647549.1 ProteinModelPortal:Q55FI4
STRING:Q55FI4 PRIDE:Q55FI4 EnsemblProtists:DDB0305289
GeneID:8616357 KEGG:ddi:DDB_G0268098 KO:K14565 OMA:HTELTEY
Uniprot:Q55FI4
Length = 638
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 192/353 (54%), Positives = 248/353 (70%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
EL+RG+R QL L++ QDL MS+GLSHS SRYKLKFS DKVDTMI+QAI LLDDL
Sbjct: 117 ELIRGIRLQLKSLVNANE-QDLNAMSIGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLT 175
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
E+N YAMR REWYGWHFPEL K+I ++ YA A+K MG+R +A DF++ILPEEV +
Sbjct: 176 TEINIYAMRAREWYGWHFPELGKLITNHTQYANAIKAMGNRKSAVDTDFTDILPEEVAEE 235
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+KEAA ISMGTE+S DL +I LCDQ LS+ Y +L +YLKSRM +APNLT LVGE+
Sbjct: 236 VKEAAQISMGTEISPEDLDHIFALCDQFLSIQAYHTELTEYLKSRMEAIAPNLTILVGEI 295
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLI GSL+NLAK P ST+QILGAEKALFRALKTKH TPKYGLIY+A +VG+A+ K
Sbjct: 296 VGARLICRAGSLMNLAKYPASTIQILGAEKALFRALKTKHNTPKYGLIYNAKIVGEASLK 355
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
+KGK+SR LA+K AL+ R+DAL + D S G+ + ++ R +EG+E+ ++ + K +
Sbjct: 356 NKGKMSRVLAAKAALSARFDALCEVSDTSYGIAYKGAVDRRAAAIEGREVRKSLNAVKPE 415
Query: 302 PKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEEVAA 354
V D K T T + A S E++ ++ ++ MEE ++
Sbjct: 416 KSGNVAKYDHTKSA----TTNTTRDVATKSS---KESSIKQEKQDVKMEEASS 461
>WB|WBGene00020915 [details] [associations]
symbol:nol-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040019 "positive
regulation of embryonic development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] Pfam:PF01798
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040035 GO:GO:0040019 GO:GO:0040027
eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 HOGENOM:HOG000196310 OMA:DAHEQLA
GeneTree:ENSGT00550000074998 EMBL:FO081759 PIR:T32941
RefSeq:NP_491134.1 HSSP:O28191 ProteinModelPortal:O45012 SMR:O45012
STRING:O45012 PaxDb:O45012 EnsemblMetazoa:W01B11.3.1
EnsemblMetazoa:W01B11.3.2 EnsemblMetazoa:W01B11.3.3 GeneID:171901
KEGG:cel:CELE_W01B11.3 UCSC:W01B11.3 CTD:171901 WormBase:W01B11.3
InParanoid:O45012 NextBio:873175 Uniprot:O45012
Length = 487
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 187/315 (59%), Positives = 238/315 (75%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
ELMRGVR+ + +L++ +++ M+L ++HSL+RYK+KF+ +K+DTMI+QA+ LLDDLD
Sbjct: 113 ELMRGVRAHIEDLLAEHK-EEMNAMNLAVAHSLARYKVKFNPEKIDTMIVQAVSLLDDLD 171
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KELN Y MRVREWYGWHFPEL K IQD+ YAK +K +G R N D S ILPEE+E +
Sbjct: 172 KELNNYVMRVREWYGWHFPELGKTIQDHQAYAKIIKAIGMRQNCINTDLSSILPEELEEK 231
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+KE A ISMGT++SD+DL++IK LCDQV+ L+ YRAQL+DYLK+RM +APNLT L+GEL
Sbjct: 232 VKEDAEISMGTDISDIDLIHIKGLCDQVIELSAYRAQLFDYLKNRMTALAPNLTVLLGEL 291
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGARLI+H GSL++LAK P ST+QILGAEKALFRALKTK TPKYGLIYHA L+ QA PK
Sbjct: 292 VGARLISHAGSLVSLAKAPASTIQILGAEKALFRALKTKKDTPKYGLIYHAQLITQAPPK 351
Query: 242 HKGKISRSLASKTALAIRYDALGD-GQDNSMGLENRAKLEARLR--NLEGKELGRAAGSA 298
KGK++R LA+K +LA R DAL D N +G+E RA LE LR + G ++ GS
Sbjct: 352 VKGKMARKLAAKCSLATRIDALSDESATNEIGIECRAALENVLRTESERGPSKNKSFGSH 411
Query: 299 ---KGKPKIEVYDKD 310
K + K E Y+ D
Sbjct: 412 RHDKYEFKSETYEYD 426
>GENEDB_PFALCIPARUM|PF10_0085 [details] [associations]
symbol:PF10_0085 "nucleolar protein NOP5,
putative" species:5833 "Plasmodium falciparum" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] Pfam:PF01798
GO:GO:0003723 EMBL:AE014185 GO:GO:0006364 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 KO:K14565 HOGENOM:HOG000196310 OMA:DLRTTPK
HSSP:O28191 RefSeq:XP_001347370.1 ProteinModelPortal:Q8IJV7
PRIDE:Q8IJV7 EnsemblProtists:PF10_0085:mRNA GeneID:810243
KEGG:pfa:PF10_0085 EuPathDB:PlasmoDB:PF3D7_1008800
ProtClustDB:CLSZ2432650 Uniprot:Q8IJV7
Length = 469
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 175/325 (53%), Positives = 233/325 (71%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RG+R+ L EL+ G+ +D + + L LSHSL+R+KLKFSADKVD MI+QA+GLL+DLD
Sbjct: 117 EIIRGIRTHLYELLVGVNEEDSKLLKLSLSHSLNRFKLKFSADKVDVMIVQAVGLLEDLD 176
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KE+N ++MR++EWYGWHFPEL K+I DN +YAK VKL+G R+NA ++ E EE++ +
Sbjct: 177 KEINVFSMRLKEWYGWHFPELGKVITDNKIYAKCVKLIGFRNNAKNVNLLEETTEEIQKE 236
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K+ A ISMGTE+ D DL I EL D++L L +YR L YLK RMN++APNLT LVG+L
Sbjct: 237 IKQLAEISMGTEIEDDDLNCINELADRLLELTDYRESLATYLKYRMNSIAPNLTYLVGDL 296
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGA+LIA GSL++LAK P ST+QILG+EKALFRALKTK TPKYGLIYHA+LVGQ APK
Sbjct: 297 VGAKLIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTPKYGLIYHATLVGQTAPK 356
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
KG+ISRSLA+K +L R DALG+ + S+ + ++ LE RL + L + +
Sbjct: 357 LKGRISRSLAAKLSLCTRVDALGNFVEPSIAITCKSHLEKRLEYITSN-LQKKLSNPNNN 415
Query: 302 PKIEVYDKDRKKGPGAMITAAKTYN 326
K + + K P +N
Sbjct: 416 VKAQQQGQQNKYNPNQKNDGQNNFN 440
>UNIPROTKB|Q8IJV7 [details] [associations]
symbol:PF10_0085 "Nucleolar protein NOP5, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006364 "rRNA processing" evidence=ISS] Pfam:PF01798
GO:GO:0003723 EMBL:AE014185 GO:GO:0006364 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 KO:K14565 HOGENOM:HOG000196310 OMA:DLRTTPK
HSSP:O28191 RefSeq:XP_001347370.1 ProteinModelPortal:Q8IJV7
PRIDE:Q8IJV7 EnsemblProtists:PF10_0085:mRNA GeneID:810243
KEGG:pfa:PF10_0085 EuPathDB:PlasmoDB:PF3D7_1008800
ProtClustDB:CLSZ2432650 Uniprot:Q8IJV7
Length = 469
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 175/325 (53%), Positives = 233/325 (71%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RG+R+ L EL+ G+ +D + + L LSHSL+R+KLKFSADKVD MI+QA+GLL+DLD
Sbjct: 117 EIIRGIRTHLYELLVGVNEEDSKLLKLSLSHSLNRFKLKFSADKVDVMIVQAVGLLEDLD 176
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
KE+N ++MR++EWYGWHFPEL K+I DN +YAK VKL+G R+NA ++ E EE++ +
Sbjct: 177 KEINVFSMRLKEWYGWHFPELGKVITDNKIYAKCVKLIGFRNNAKNVNLLEETTEEIQKE 236
Query: 122 LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGEL 181
+K+ A ISMGTE+ D DL I EL D++L L +YR L YLK RMN++APNLT LVG+L
Sbjct: 237 IKQLAEISMGTEIEDDDLNCINELADRLLELTDYRESLATYLKYRMNSIAPNLTYLVGDL 296
Query: 182 VGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAPK 241
VGA+LIA GSL++LAK P ST+QILG+EKALFRALKTK TPKYGLIYHA+LVGQ APK
Sbjct: 297 VGAKLIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTPKYGLIYHATLVGQTAPK 356
Query: 242 HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAAGSAKGK 301
KG+ISRSLA+K +L R DALG+ + S+ + ++ LE RL + L + +
Sbjct: 357 LKGRISRSLAAKLSLCTRVDALGNFVEPSIAITCKSHLEKRLEYITSN-LQKKLSNPNNN 415
Query: 302 PKIEVYDKDRKKGPGAMITAAKTYN 326
K + + K P +N
Sbjct: 416 VKAQQQGQQNKYNPNQKNDGQNNFN 440
>TAIR|locus:2087755 [details] [associations]
symbol:AT3G12860 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0006606 "protein import into
nucleus" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0042991 "transcription factor
import into nucleus" evidence=RCA] Pfam:PF01798 EMBL:CP002686
GO:GO:0003676 GO:GO:0030529 EMBL:AB024033 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 OMA:QEAPQEN HSSP:O28191
IPI:IPI00527919 RefSeq:NP_187892.2 UniGene:At.53283
ProteinModelPortal:Q9LTV0 SMR:Q9LTV0 STRING:Q9LTV0 PRIDE:Q9LTV0
EnsemblPlants:AT3G12860.1 GeneID:820468 KEGG:ath:AT3G12860
TAIR:At3g12860 InParanoid:Q9LTV0 PhylomeDB:Q9LTV0
ProtClustDB:CLSN2682875 ArrayExpress:Q9LTV0 Genevestigator:Q9LTV0
Uniprot:Q9LTV0
Length = 499
Score = 763 (273.6 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 150/286 (52%), Positives = 208/286 (72%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
EL+RGVR I L DL+ LGL+HS SR K+KF+ ++VD M+IQAI +LD LD
Sbjct: 123 ELLRGVRQHFDRFIKDLKPGDLEKAQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLD 182
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDF---SEILPEEV 118
K++N++AMRVREWY WHFPEL KI+ DN LYAK K++ D+S ++ +E L +E
Sbjct: 183 KDINSFAMRVREWYSWHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEHIPMLTEALGDED 242
Query: 119 EA-QLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+A ++ EA SMG ++S +DL+N++ +V+ LA+YR +LYDYL ++M+ +APNL AL
Sbjct: 243 KAREVIEAGKASMGQDLSPVDLINVQTFAQRVMDLADYRKKLYDYLVTKMSDIAPNLAAL 302
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+GE+VGARLI+H GSL NLAK P ST+QILGAEKALFRALKT+ TPKYGLI+H+S +G+
Sbjct: 303 IGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGR 362
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL 283
A+ K+KG+I+R LA+K ++A R D D + G + R ++E RL
Sbjct: 363 ASAKNKGRIARFLANKCSIASRIDCFSDNSTTAFGEKLREQVEERL 408
Score = 40 (19.1 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 283 LRNLEGKELG-RAAGSAKGKPKIEVYDKDRKK 313
L NLE K+ G + +++ K K + +K+ +K
Sbjct: 428 LENLEKKDEGEKTVDASEKKKKRKTEEKEEEK 459
>TAIR|locus:2205270 [details] [associations]
symbol:NOP56 "homolog of nucleolar protein NOP56"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] Pfam:PF01798 EMBL:CP002684
GO:GO:0009506 GO:GO:0005618 GO:GO:0005730 UniGene:At.48973
EMBL:AC009894 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 HSSP:O28191 ProtClustDB:CLSN2682875 EMBL:AF302492
EMBL:AY039541 EMBL:AY102151 EMBL:AY087080 IPI:IPI00548989
PIR:D96602 RefSeq:NP_176007.1 UniGene:At.22033
ProteinModelPortal:Q9SGT7 SMR:Q9SGT7 IntAct:Q9SGT7 STRING:Q9SGT7
PRIDE:Q9SGT7 EnsemblPlants:AT1G56110.1 GeneID:842063
KEGG:ath:AT1G56110 TAIR:At1g56110 InParanoid:Q9SGT7 OMA:GSHITEA
PhylomeDB:Q9SGT7 Genevestigator:Q9SGT7 Uniprot:Q9SGT7
Length = 522
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 151/287 (52%), Positives = 211/287 (73%)
Query: 1 MELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDL 60
+EL+RGVR I L DL+ LGL+HS SR K+KF+ ++VD M+IQAI +LD L
Sbjct: 122 LELLRGVRQHFDRFIKDLKPGDLEKSQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTL 181
Query: 61 DKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDF---SEILPEE 117
DK++N++AMRVREWY WHFPEL KI+ DN LYA+ K++ D+S + +E+L +E
Sbjct: 182 DKDINSFAMRVREWYSWHFPELVKIVNDNYLYARVSKMIDDKSKLTEDHIPMLTEVLGDE 241
Query: 118 VEA-QLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTA 176
+A ++ EA SMG+++S LDL+N++ +V+ LA+YR +LYDYL ++M+ +APNL A
Sbjct: 242 DKAKEVIEAGKASMGSDLSPLDLINVQTFAQKVMDLADYRKKLYDYLVTKMSDIAPNLAA 301
Query: 177 LVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVG 236
L+GE+VGARLI+H GSL NLAK P ST+QILGAEKALFRALKT+ TPKYGLI+H+S +G
Sbjct: 302 LIGEMVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIG 361
Query: 237 QAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL 283
+A+ K+KG+I+R LA+K ++A R D DG + G + R ++E RL
Sbjct: 362 RASAKNKGRIARYLANKCSIASRIDCFADGATTAFGEKLREQVEERL 408
>MGI|MGI:1914384 [details] [associations]
symbol:Nop56 "NOP56 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030515 "snoRNA binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070761 "pre-snoRNP
complex" evidence=ISO] Reactome:REACT_93132 MGI:MGI:1914384
Pfam:PF01798 GO:GO:0005737 GO:GO:0005730 GO:GO:0030515
GO:GO:0042254 GO:GO:0070761 GO:GO:0005732 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 OMA:QEAPQEN ChiTaRS:NOP56
EMBL:AK009799 EMBL:AK011481 EMBL:AK077795 EMBL:AK150258
EMBL:BC002231 EMBL:BC021355 IPI:IPI00318048 RefSeq:NP_077155.2
UniGene:Mm.29363 ProteinModelPortal:Q9D6Z1 SMR:Q9D6Z1 IntAct:Q9D6Z1
STRING:Q9D6Z1 PhosphoSite:Q9D6Z1 PaxDb:Q9D6Z1 PRIDE:Q9D6Z1
Ensembl:ENSMUST00000103198 GeneID:67134 KEGG:mmu:67134
GeneTree:ENSGT00550000075068 InParanoid:Q9D6Z1 NextBio:323680
Bgee:Q9D6Z1 CleanEx:MM_NOL5A Genevestigator:Q9D6Z1
GermOnline:ENSMUSG00000027405 Uniprot:Q9D6Z1
Length = 580
Score = 745 (267.3 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 152/296 (51%), Positives = 209/296 (70%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RGVR L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LD
Sbjct: 120 EILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLD 179
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEV 118
K++NT++MRVREWYG+HFPEL KI+ DN Y + + +G+R N KL+ EI +
Sbjct: 180 KDINTFSMRVREWYGYHFPELVKIVNDNATYCRLAQFIGNRRELNEEKLEKLEEITMDGA 239
Query: 119 EAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+A+ + +A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL
Sbjct: 240 KAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSAL 299
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+GE VGARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+
Sbjct: 300 IGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 359
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 293
AA K+KG+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 360 AAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
Score = 45 (20.9 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 298 AKGKPKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEK--PMEEVAA 354
+K K K++ + + P ++ + K P + L E A S +K P EEVA+
Sbjct: 478 SKKKKKLKPQENGMEDPPVSLPKSKKKKAPKEELASDLEEMATSSAKRKKSSPKEEVAS 536
>ZFIN|ZDB-GENE-040109-1 [details] [associations]
symbol:nop56 "NOP56 ribonucleoprotein homolog"
species:7955 "Danio rerio" [GO:0007507 "heart development"
evidence=IMP] Pfam:PF01798 ZFIN:ZDB-GENE-040109-1 GO:GO:0007507
HOGENOM:HOG000196309 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 GeneTree:ENSGT00550000075068 HOVERGEN:HBG007270
EMBL:CT027620 EMBL:AY648814 IPI:IPI00932106 UniGene:Dr.76899
STRING:Q6DRE5 Ensembl:ENSDART00000114524 InParanoid:Q6DRE5
OMA:LINIECF Uniprot:Q6DRE5
Length = 548
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 170/368 (46%), Positives = 238/368 (64%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RGVR L+ GL Q LGL HS SR K+KF+ ++ D MIIQ+I LLD LD
Sbjct: 121 EIIRGVRLHFHSLVKGLTAQAASKAQLGLGHSYSRAKVKFNVNRADNMIIQSIALLDQLD 180
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAK--LD-FSEILPEEV 118
K++NT++MRVREWYG+HFPEL KI+ DN Y K KL+G+R ++ L+ EI +
Sbjct: 181 KDINTFSMRVREWYGYHFPELIKIVSDNSTYCKLAKLIGNRKELSEEMLEAMEEITMDSA 240
Query: 119 EAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+AQ + +A+ SMG ++S +DL+NI+ +V+SL +YR +L +YL+S+M VAPNL AL
Sbjct: 241 KAQAILDASRSSMGMDISPIDLINIECFSSRVVSLTDYRQELQEYLRSKMGQVAPNLAAL 300
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+GE+VGARLI+H GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+
Sbjct: 301 IGEVVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 360
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL----------RNLE 287
AA K+KG+ISR LA+K +A R D + + G + R ++E RL +NL+
Sbjct: 361 AAAKNKGRISRYLANKCTIASRIDCFSEVPTSVFGDKLRDQVEERLAFYETGEAPRKNLD 420
Query: 288 G-KELGRAAG--SAKGKPKIEVYDKDRKKGPGAMITAAKTYNPAADSILGLMEN-AASKD 343
KE A +A+ K K+E +K +KK + A T ++ + EN A+K
Sbjct: 421 VMKEAVAQASEVAAEIKRKLEKKEKKKKKRQ-KKLEALSTAEGDEETNGDVEENEVATKK 479
Query: 344 DEEKPMEE 351
++K E
Sbjct: 480 KKKKQAAE 487
>RGD|1308892 [details] [associations]
symbol:Nop56 "NOP56 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0070761 "pre-snoRNP complex" evidence=ISO] Pfam:PF01798
RGD:1308892 GO:GO:0030515 GO:GO:0070761 GO:GO:0005732
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
IPI:IPI00357923 UniGene:Rn.145204 HOVERGEN:HBG007270 EMBL:BC086568
ProteinModelPortal:Q5RJN5 STRING:Q5RJN5 UCSC:RGD:1308892
InParanoid:Q5RJN5 ArrayExpress:Q5RJN5 Genevestigator:Q5RJN5
Uniprot:Q5RJN5
Length = 499
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 153/296 (51%), Positives = 210/296 (70%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RGVR L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LD
Sbjct: 31 EILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLD 90
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEV 118
K++NT++MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ EI +
Sbjct: 91 KDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEEKLEKLEEITMDGA 150
Query: 119 EAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+A+ + +A+ SMG ++S +DL+NI+ +V+SL+EYR L++YL+S+M+ VAP+L+AL
Sbjct: 151 KAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHNYLRSKMSQVAPSLSAL 210
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+GE VGARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+
Sbjct: 211 IGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 270
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 293
AA K+KG+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 271 AAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 326
>UNIPROTKB|Q4KLK7 [details] [associations]
symbol:Nol5a "RCG26515, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0070761 "pre-snoRNP complex" evidence=IEA] Pfam:PF01798
RGD:1308892 GO:GO:0030515 GO:GO:0070761 EMBL:CH473949 GO:GO:0005732
CTD:10528 eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564
OrthoDB:EOG41G342 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075068 EMBL:BC099149 IPI:IPI00357923
RefSeq:NP_001020903.1 UniGene:Rn.145204 STRING:Q4KLK7
Ensembl:ENSRNOT00000009564 GeneID:362214 KEGG:rno:362214
HOVERGEN:HBG007270 InParanoid:Q4KLK7 NextBio:679052
Genevestigator:Q4KLK7 Uniprot:Q4KLK7
Length = 588
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 153/296 (51%), Positives = 210/296 (70%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RGVR L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LD
Sbjct: 120 EILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLD 179
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEV 118
K++NT++MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ EI +
Sbjct: 180 KDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEEKLEKLEEITMDGA 239
Query: 119 EAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+A+ + +A+ SMG ++S +DL+NI+ +V+SL+EYR L++YL+S+M+ VAP+L+AL
Sbjct: 240 KAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHNYLRSKMSQVAPSLSAL 299
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+GE VGARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+
Sbjct: 300 IGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 359
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 293
AA K+KG+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 360 AAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>UNIPROTKB|F1MW06 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9913 "Bos
taurus" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=IEA] Pfam:PF01798
IPI:IPI00712128 UniGene:Bt.49005 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN GeneTree:ENSGT00550000075068
EMBL:DAAA02036191 Ensembl:ENSBTAT00000025042 Uniprot:F1MW06
Length = 596
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 152/296 (51%), Positives = 209/296 (70%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RGVR L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LD
Sbjct: 120 EILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLD 179
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEV 118
K++NT++MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ E+ +
Sbjct: 180 KDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRKELNEEKLEKLEELTMDAA 239
Query: 119 EAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+A+ + +A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL
Sbjct: 240 KAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSAL 299
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+GE VGARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+
Sbjct: 300 IGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 359
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 293
AA K+KG+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 360 AAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>UNIPROTKB|Q3SZ63 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] Pfam:PF01798 GO:GO:0005737 GO:GO:0005730
GO:GO:0042254 EMBL:BC103114 IPI:IPI00712128 RefSeq:NP_001028794.1
UniGene:Bt.49005 ProteinModelPortal:Q3SZ63 STRING:Q3SZ63
PRIDE:Q3SZ63 GeneID:404165 KEGG:bta:404165 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 InParanoid:Q3SZ63 KO:K14564 OrthoDB:EOG41G342
NextBio:20817597 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 Uniprot:Q3SZ63
Length = 596
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 152/296 (51%), Positives = 209/296 (70%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RGVR L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LD
Sbjct: 120 EILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLD 179
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEV 118
K++NT++MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ E+ +
Sbjct: 180 KDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRKELNEEKLEKLEELTMDAA 239
Query: 119 EAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+A+ + +A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL
Sbjct: 240 KAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSAL 299
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+GE VGARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+
Sbjct: 300 IGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 359
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 293
AA K+KG+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 360 AAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>UNIPROTKB|E2QU53 [details] [associations]
symbol:NOP56 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070761 "pre-snoRNP complex" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=IEA] Pfam:PF01798
GO:GO:0030515 GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN GeneTree:ENSGT00550000075068
EMBL:AAEX03013839 Ensembl:ENSCAFT00000010731 Uniprot:E2QU53
Length = 597
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 152/296 (51%), Positives = 209/296 (70%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RGVR L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LD
Sbjct: 120 EILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLD 179
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEV 118
K++NT++MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ E+ +
Sbjct: 180 KDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEEKLEKLEELTMDGA 239
Query: 119 EAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+A+ + +A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL
Sbjct: 240 KAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSAL 299
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+GE VGARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+
Sbjct: 300 IGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 359
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 293
AA K+KG+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 360 AAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>UNIPROTKB|O00567 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9606 "Homo
sapiens" [GO:0008219 "cell death" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005730 "nucleolus" evidence=TAS] [GO:0006364 "rRNA processing"
evidence=TAS] [GO:0030515 "snoRNA binding" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IDA] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070761 "pre-snoRNP
complex" evidence=IDA] Reactome:REACT_17015 Pfam:PF01798
GO:GO:0005737 GO:GO:0008219 GO:GO:0030515 GO:GO:0070761
GO:GO:0006364 GO:GO:0031428 EMBL:AL049712 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 EMBL:Y12065 EMBL:BC104791
EMBL:BC104793 IPI:IPI00411937 RefSeq:NP_006383.2 UniGene:Hs.376064
ProteinModelPortal:O00567 SMR:O00567 IntAct:O00567 STRING:O00567
PhosphoSite:O00567 SWISS-2DPAGE:O00567 PaxDb:O00567 PRIDE:O00567
Ensembl:ENST00000329276 GeneID:10528 KEGG:hsa:10528 UCSC:uc002wgh.3
GeneCards:GC20P002698 HGNC:HGNC:15911 HPA:HPA049918 MIM:614153
MIM:614154 neXtProt:NX_O00567 Orphanet:276198 PharmGKB:PA164724063
InParanoid:O00567 OMA:QEAPQEN PhylomeDB:O00567 ChiTaRS:NOP56
GenomeRNAi:10528 NextBio:39942 ArrayExpress:O00567 Bgee:O00567
Genevestigator:O00567 GermOnline:ENSG00000101361 Uniprot:O00567
Length = 594
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 152/296 (51%), Positives = 209/296 (70%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RGVR L+ GL LGL HS SR K+KF+ ++VD MIIQ+I LLD LD
Sbjct: 120 EILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLD 179
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKLD-FSEILPEEV 118
K++NT++MRVREWYG+HFPEL KII DN Y + + +G+R N KL+ E+ +
Sbjct: 180 KDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEDKLEKLEELTMDGA 239
Query: 119 EAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+A+ + +A+ SMG ++S +DL+NI+ +V+SL+EYR L+ YL+S+M+ VAP+L+AL
Sbjct: 240 KAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSAL 299
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+GE VGARLIAH GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLI+H++ +G+
Sbjct: 300 IGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 359
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 293
AA K+KG+ISR LA+K ++A R D + + G + R ++E RL E E+ R
Sbjct: 360 AAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPR 415
>SGD|S000004187 [details] [associations]
symbol:NOP56 "Nucleolar protein component of the box C/D
snoRNP complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0031428
"box C/D snoRNP complex" evidence=IDA;IPI] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0000154 "rRNA modification"
evidence=TAS] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] SGD:S000004187
Pfam:PF01798 EMBL:BK006945 GO:GO:0030686 GO:GO:0032040 EMBL:U14913
GO:GO:0000154 GO:GO:0031428 eggNOG:COG1498 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 OMA:QEAPQEN
GeneTree:ENSGT00550000075068 OrthoDB:EOG42FWS6 EMBL:U20237
PIR:S48550 RefSeq:NP_013298.1 ProteinModelPortal:Q12460 SMR:Q12460
DIP:DIP-4405N IntAct:Q12460 MINT:MINT-525679 STRING:Q12460
PaxDb:Q12460 PeptideAtlas:Q12460 EnsemblFungi:YLR197W GeneID:850894
KEGG:sce:YLR197W CYGD:YLR197w NextBio:967272 Genevestigator:Q12460
GermOnline:YLR197W Uniprot:Q12460
Length = 504
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 160/328 (48%), Positives = 218/328 (66%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
+L+RGVR +L GL DL+ LGL H+ SR K+KFS K D IIQAI LLD LD
Sbjct: 126 DLIRGVRLHGEKLFKGLQSGDLERAQLGLGHAYSRAKVKFSVQKNDNHIIQAIALLDQLD 185
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKL-DFSEILPEE- 117
K++NT+AMRV+EWYGWHFPELAK++ DN +AK V + D++ N L D + +L E+
Sbjct: 186 KDINTFAMRVKEWYGWHFPELAKLVPDNYTFAKLVLFIKDKASLNDDSLHDLAALLNEDS 245
Query: 118 -VEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTA 176
+ ++ + A ISMG ++S+ D+ N+ +V SLA+YR QLYDYL +M+TVAPNL+
Sbjct: 246 GIAQRVIDNARISMGQDISETDMENVCVFAQRVASLADYRRQLYDYLCEKMHTVAPNLSE 305
Query: 177 LVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVG 236
L+GE++GARLI+H GSL NL+KQ STVQILGAEKALFRALKTK TPKYGLIYH+ +
Sbjct: 306 LIGEVIGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFIS 365
Query: 237 QAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLE-GKELGRAA 295
+A+ K+KG+ISR LA+K ++A R D + N G + ++E RL GK +
Sbjct: 366 KASAKNKGRISRYLANKCSMASRIDNYSEEPSNVFGSVLKKQVEQRLEFYNTGKPTLK-- 423
Query: 296 GSAKGKPKIEVYDKDRKKGPGAMITAAK 323
+ +E+Y+KD+ P A + K
Sbjct: 424 NELAIQEAMELYNKDK---PAAEVEETK 448
>POMBASE|SPBC646.10c [details] [associations]
symbol:SPBC646.10c "U3 snoRNP protein Nop56 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISO]
Pfam:PF01798 PomBase:SPBC646.10c GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0030532 GO:GO:0005732
eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 PIR:T40586 RefSeq:NP_595368.1
ProteinModelPortal:O94514 IntAct:O94514 STRING:O94514
EnsemblFungi:SPBC646.10c.1 GeneID:2541087 KEGG:spo:SPBC646.10c
OMA:QQLHEYI OrthoDB:EOG42FWS6 NextBio:20802200 Uniprot:O94514
Length = 497
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 146/287 (50%), Positives = 204/287 (71%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
+L+RG+R +L+ L+ D + LGL HS SR K+KF+ ++ D MIIQAI +LD LD
Sbjct: 122 DLLRGIRFHGDKLLKQLSPGDFERAQLGLGHSYSRAKVKFNVNRNDNMIIQAIAILDQLD 181
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRS--NAAKL-DFSEILPEEV 118
K++NT+AMR++EWY WHFPEL+KI+ DN YA V L+GD++ N L D + ++ ++
Sbjct: 182 KDINTFAMRMKEWYSWHFPELSKIVGDNYKYAVIVTLVGDKTTINDEMLHDLAAVVDDDK 241
Query: 119 E-AQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTA 176
+ AQ + A +SMG ++S++DL NI ++V+ L+ YR QL++YL +MN VAPNL
Sbjct: 242 DIAQSIINAGKVSMGQDISEIDLENILSFAERVIKLSNYRKQLHNYLVQKMNVVAPNLAE 301
Query: 177 LVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVG 236
L+GE+VGARLI+H GSL NL+K P STVQILGAEKALFRALKT+ TPKYG+IYH+S +G
Sbjct: 302 LIGEMVGARLISHAGSLTNLSKCPASTVQILGAEKALFRALKTRGNTPKYGIIYHSSFIG 361
Query: 237 QAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL 283
+A K+KG+ISR LA+K ++A R D D + G R ++E RL
Sbjct: 362 KAGAKNKGRISRFLANKCSIASRIDNFSDAPTTAFGQVLRRQVEERL 408
>FB|FBgn0038964 [details] [associations]
symbol:Nop56 "Nop56" species:7227 "Drosophila melanogaster"
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS;NAS] [GO:0022008
"neurogenesis" evidence=IMP] Pfam:PF01798 GO:GO:0022008
eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
EMBL:BT001613 ProteinModelPortal:Q8IGT5 SMR:Q8IGT5 STRING:Q8IGT5
PaxDb:Q8IGT5 PRIDE:Q8IGT5 FlyBase:FBgn0038964 InParanoid:Q8IGT5
OrthoDB:EOG4V6WZ4 ArrayExpress:Q8IGT5 Bgee:Q8IGT5 Uniprot:Q8IGT5
Length = 496
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 148/296 (50%), Positives = 207/296 (69%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RGVR +L+ G + LGL HS SR K+KF+ + D MIIQ+I LLD LD
Sbjct: 121 EILRGVRFHFAKLVKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLD 180
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAK--L-DFSEILPEEV 118
K++NT++MR+REWY +HFPEL KI+ DN ++AKA K + DR N + L D +I+ +
Sbjct: 181 KDVNTFSMRIREWYSYHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSA 240
Query: 119 EAQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTAL 177
+AQ + AA +SMG ++S +DL+NI+ ++V+ L+EYR +L YL ++MN VAPNL +L
Sbjct: 241 KAQAIIGAAKMSMGMDISIVDLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSL 300
Query: 178 VGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQ 237
+G+ VGARLI+H GSL NLAK P STVQILGAEKALFRALKT+ TPKYGLIYH+S +G+
Sbjct: 301 IGDQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGR 360
Query: 238 AAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGR 293
A K+KG+ISR LA+K ++A R D + + G + ++E RL+ E ++ R
Sbjct: 361 AGLKNKGRISRFLANKCSIASRIDCFLEQPTSVFGETLKQQVEDRLKFYESGDVPR 416
>CGD|CAL0000142 [details] [associations]
symbol:SIK1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0031428 "box C/D snoRNP complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] CGD:CAL0000142
Pfam:PF01798 EMBL:AACQ01000032 GO:GO:0032040 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 RefSeq:XP_719331.1 ProteinModelPortal:Q5ACS3
STRING:Q5ACS3 GeneID:3638925 KEGG:cal:CaO19.7569 Uniprot:Q5ACS3
Length = 516
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 147/288 (51%), Positives = 201/288 (69%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
+ +RG+R +L L D++ LGL H+ SR K+KFS K D IIQAI LLD LD
Sbjct: 125 DFLRGIRVHGAKLFKDLQEGDIERAQLGLGHAFSRAKVKFSVQKNDNHIIQAIALLDQLD 184
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAA--KL-DFSEILPEE- 117
K++NT+AMRV+EWYGWHFPELAKI+ DN YAK + D+++ L D + IL ++
Sbjct: 185 KDINTFAMRVKEWYGWHFPELAKIVPDNYSYAKLALSIKDKASLTDDSLHDVAAILNDDS 244
Query: 118 -VEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTA 176
+ ++ + A ISMG ++S+ D+ N+ +V++L EYR QLY YL +M+TVAPNL+
Sbjct: 245 GLAQRVIDNAKISMGQDISEQDMDNVITFAQRVVNLYEYRQQLYKYLTDKMHTVAPNLST 304
Query: 177 LVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVG 236
L+GE+VGARLI+H GSL NL+KQ STVQILGAEKALFRALKTK TPKYGLIYH+S +G
Sbjct: 305 LIGEVVGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSSFIG 364
Query: 237 QAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLR 284
+A+ K+KG+ISR LA+K ++A R D + + G + ++E RL+
Sbjct: 365 KASAKNKGRISRYLANKCSIASRIDNYSEEPTTAFGEILKKQVEDRLK 412
>UNIPROTKB|Q5ACS3 [details] [associations]
symbol:SIK1 "Putative uncharacterized protein SIK1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] CGD:CAL0000142 Pfam:PF01798
EMBL:AACQ01000032 GO:GO:0032040 eggNOG:COG1498 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 RefSeq:XP_719331.1
ProteinModelPortal:Q5ACS3 STRING:Q5ACS3 GeneID:3638925
KEGG:cal:CaO19.7569 Uniprot:Q5ACS3
Length = 516
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 147/288 (51%), Positives = 201/288 (69%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
+ +RG+R +L L D++ LGL H+ SR K+KFS K D IIQAI LLD LD
Sbjct: 125 DFLRGIRVHGAKLFKDLQEGDIERAQLGLGHAFSRAKVKFSVQKNDNHIIQAIALLDQLD 184
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAA--KL-DFSEILPEE- 117
K++NT+AMRV+EWYGWHFPELAKI+ DN YAK + D+++ L D + IL ++
Sbjct: 185 KDINTFAMRVKEWYGWHFPELAKIVPDNYSYAKLALSIKDKASLTDDSLHDVAAILNDDS 244
Query: 118 -VEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTA 176
+ ++ + A ISMG ++S+ D+ N+ +V++L EYR QLY YL +M+TVAPNL+
Sbjct: 245 GLAQRVIDNAKISMGQDISEQDMDNVITFAQRVVNLYEYRQQLYKYLTDKMHTVAPNLST 304
Query: 177 LVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVG 236
L+GE+VGARLI+H GSL NL+KQ STVQILGAEKALFRALKTK TPKYGLIYH+S +G
Sbjct: 305 LIGEVVGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSSFIG 364
Query: 237 QAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLR 284
+A+ K+KG+ISR LA+K ++A R D + + G + ++E RL+
Sbjct: 365 KASAKNKGRISRYLANKCSIASRIDNYSEEPTTAFGEILKKQVEDRLK 412
>ASPGD|ASPL0000040023 [details] [associations]
symbol:AN10352 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=IEA]
Pfam:PF01798 EMBL:BN001306 GO:GO:0030686 GO:GO:0006364
GO:GO:0032040 GO:GO:0031428 HOGENOM:HOG000196309 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN EnsemblFungi:CADANIAT00010009
Uniprot:C8VIQ3
Length = 510
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 145/287 (50%), Positives = 196/287 (68%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
+++RGVR ++L+ L D+ LGL H+ SR K+KFS + D IIQAI +LD LD
Sbjct: 126 DMLRGVRLHASKLLKQLREGDMDTAQLGLGHAYSRAKVKFSVQRDDNHIIQAIAILDQLD 185
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEI--LPEEVE 119
K +NT++MRVREWY WHFPEL KI+ DN YA+ + D+ + +I L E+ E
Sbjct: 186 KAINTFSMRVREWYSWHFPELIKIVSDNQRYAQLALFIKDKKTLTDENLHDIAALVEDDE 245
Query: 120 --AQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTA 176
AQ + +AA SMG ++S+ D+ N+ +V+SL++YR L+ YL S+MN VAPNL A
Sbjct: 246 GVAQSIIDAAKRSMGQDISESDMENVISFAQRVVSLSKYRKSLHSYLVSKMNVVAPNLAA 305
Query: 177 LVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVG 236
L+G++VGARLI+H GSL NL+K P STVQILGAEKALFRALKTK TPKYGL+YH+S +G
Sbjct: 306 LIGDIVGARLISHAGSLTNLSKYPASTVQILGAEKALFRALKTKGNTPKYGLLYHSSFIG 365
Query: 237 QAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL 283
+A PK+KG+ISR LA+K ++A R D D G + ++E RL
Sbjct: 366 RAGPKNKGRISRFLANKCSIASRIDNFSDTPTTKYGDALKKQVEERL 412
>WB|WBGene00010627 [details] [associations]
symbol:K07C5.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] Pfam:PF01798 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040018 GO:GO:0040035 EMBL:Z71181
eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 GeneTree:ENSGT00550000075068
OMA:QQLHEYI PIR:T23405 RefSeq:NP_505660.1 ProteinModelPortal:Q21276
SMR:Q21276 STRING:Q21276 PaxDb:Q21276 EnsemblMetazoa:K07C5.4.1
EnsemblMetazoa:K07C5.4.2 GeneID:179442 KEGG:cel:CELE_K07C5.4
UCSC:K07C5.4 CTD:179442 WormBase:K07C5.4 InParanoid:Q21276
NextBio:905416 Uniprot:Q21276
Length = 486
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 157/360 (43%), Positives = 218/360 (60%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RG R L L L L L HS SR K+KF +VD M+IQ+I LLD LD
Sbjct: 123 EILRGTRVHFERLAKNLPHHSLSKAQLSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLD 182
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLD-----FSEILPE 116
K++N + MR+REWY +H+PEL ++ D Y++ + DR+ A+ + EIL
Sbjct: 183 KDINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAENENLENEILEILDN 242
Query: 117 EVE--AQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNL 174
+ E AQ+ EAA SMG ++SDLDL NIK +V SL EYR QL++Y+K RM+ AP+L
Sbjct: 243 DSEKTAQIIEAARTSMGMDISDLDLENIKRFAARVSSLMEYRQQLHEYIKDRMDHCAPSL 302
Query: 175 TALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASL 234
+AL+GE VGARLI+H GSL NLAK P STVQILGAEKALFRALKT+ TPKYGL++H+S
Sbjct: 303 SALIGEQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLLFHSSF 362
Query: 235 VGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRA 294
+G+A K+KG++SR LA+K ++A R D + ++ G R ++E RL + +
Sbjct: 363 IGKAGTKNKGRVSRYLANKCSIAARVDCFSETPVSTYGEFLRQQVEDRLEYFTSGTVPKK 422
Query: 295 AGSAKGKPK---IEVYDKDRKKGPGAMITAAKTYNPAADSILGLMENAASKDDEEKPMEE 351
+ + +EV +K KK A A K A +S+ E A +D KP ++
Sbjct: 423 NIDVMKEAEEAAVEVKEKVIKKKKKA---AKKAKRLAEESVTATAE-AEVDEDAPKPKKK 478
>DICTYBASE|DDB_G0285679 [details] [associations]
symbol:nol5a "NOP5 family protein" species:44689
"Dictyostelium discoideum" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0285679 Pfam:PF01798 GO:GO:0005730
GenomeReviews:CM000153_GR EMBL:AAFI02000079 GO:GO:0006364
GO:GO:0005732 eggNOG:COG1498 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 RefSeq:XP_638211.1
ProteinModelPortal:Q54MT2 STRING:Q54MT2 PRIDE:Q54MT2
EnsemblProtists:DDB0237576 GeneID:8625259 KEGG:ddi:DDB_G0285679
OMA:DSMVNDT ProtClustDB:CLSZ2430191 Uniprot:Q54MT2
Length = 540
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 134/288 (46%), Positives = 191/288 (66%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++R +R+ ++E L DL LGL HS SR K+KF+ KVD MIIQ+I LL+ LD
Sbjct: 119 EIIRCIRNHISEFTK-LKSADLLKAQLGLGHSYSRSKVKFNVHKVDNMIIQSICLLEQLD 177
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEI--LPEEVE 119
K+LNT+ MR+REWY WHFPEL KII+ + +AK KL+ ++ N + EI + E+ E
Sbjct: 178 KDLNTFFMRLREWYSWHFPELLKIIESQVHFAKLAKLIQNKKNLTEESLDEIKEILEDNE 237
Query: 120 AQLKE---AAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTA 176
+ K+ AA SMG ++S +DL+ + D+V+SL EYR L YL +M +APNL+A
Sbjct: 238 SLAKDVLSAAKASMGGDISQIDLVTVMHFADRVISLDEYRTNLTQYLAKKMQDIAPNLSA 297
Query: 177 LVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVG 236
LVG+ +GA+LI+ GSL +LAK P STVQILGAEKALFRA+K + TPKYG+I++AS V
Sbjct: 298 LVGDRIGAKLISRAGSLTSLAKYPASTVQILGAEKALFRAMKVRGKTPKYGIIFNASAVS 357
Query: 237 QAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLR 284
K+KG+I+R L++K ++A R D D G+ + ++ R++
Sbjct: 358 SET-KNKGRIARCLSNKISIATRIDCFSDNPTAKFGVALKQQVADRIK 404
>UNIPROTKB|G4N2E5 [details] [associations]
symbol:MGG_07915 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0000154 "rRNA modification"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISS] [GO:0031428 "box
C/D snoRNP complex" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] Pfam:PF01798 EMBL:CM001233 GO:GO:0030686
GO:GO:0032040 GO:GO:0030490 GO:GO:0000154 GO:GO:0031428 KO:K14564
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 RefSeq:XP_003713157.1
ProteinModelPortal:G4N2E5 EnsemblFungi:MGG_07915T0 GeneID:2683842
KEGG:mgr:MGG_07915 Uniprot:G4N2E5
Length = 514
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 138/287 (48%), Positives = 189/287 (65%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
+L+RG+R+ +L+ L D+ SLGL H+ SR K+KF+ + D IIQ I LD LD
Sbjct: 129 DLLRGIRTHAEKLLKSLHEGDILRGSLGLGHAYSRNKVKFNVHRNDNHIIQQIATLDALD 188
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNA--AKL-DFSEILPEEV 118
K +N MRVREWYGWHFPEL KI+ DN+ YA+ V L+G++ +KL D + +L E+
Sbjct: 189 KGINAGCMRVREWYGWHFPELIKIVSDNVTYARLVLLIGNKKELDDSKLHDIAAVLDEDG 248
Query: 119 E-AQ-LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTA 176
+ AQ + +AA +SMG ++S+ D+ +K V +A YR L + L S+M VAPNL
Sbjct: 249 DKAQAIIDAAKVSMGQDISEPDVEMVKSFATSVSKMAAYRKVLAESLDSKMGIVAPNLQC 308
Query: 177 LVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVG 236
++G V ARLI+H GSL NL+K P ST+QILGAEKALFRALKTK TPKYGLIY +S +
Sbjct: 309 ILGTPVAARLISHAGSLTNLSKYPASTLQILGAEKALFRALKTKGNTPKYGLIYQSSFIS 368
Query: 237 QAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARL 283
+A+ + KG+ISR LA+K ++A R D + + G R +LE RL
Sbjct: 369 RASARQKGRISRFLANKCSIASRIDNFSEQPSSRFGEALRQQLEDRL 415
>UNIPROTKB|H9L0K4 [details] [associations]
symbol:H9L0K4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0070761 "pre-snoRNP complex" evidence=IEA] Pfam:PF01798
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075068 EMBL:AADN02044049 EMBL:AADN02044050
EMBL:AADN02044051 Ensembl:ENSGALT00000023411 Uniprot:H9L0K4
Length = 486
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 150/365 (41%), Positives = 202/365 (55%)
Query: 2 ELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLD 61
E++RG+R L+ GL Q LGL HS SR K+KF+ ++VD MIIQ+I LLD LD
Sbjct: 93 EILRGIRLHFHALVKGLTAQSASKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLD 152
Query: 62 KELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPEEVEAQ 121
K++NT++MRVREWYG+HFPEL KI+ +N Y + L G EI+ + +AQ
Sbjct: 153 KDINTFSMRVREWYGYHFPELIKIVSEN--YTEE-SLEG---------LEEIVMDGAKAQ 200
Query: 122 -LKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTVAPNLTALVGE 180
+ EA+ SMG ++S +DL+NI+ +V+SL+EYR L +YL+S+M+ VAP+L+AL+GE
Sbjct: 201 AILEASRSSMGMDISPIDLINIESFSSRVISLSEYRKGLQEYLRSKMSQVAPSLSALIGE 260
Query: 181 LVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLVGQAAP 240
+VGARLI+H GSL NLAK P STVQILGAEKALFR A P L H +A
Sbjct: 261 VVGARLISHAGSLTNLAKYPASTVQILGAEKALFRYRCGVVALPAPALSDHCGSAARAGC 320
Query: 241 KHKGKISRSL-----ASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKELGRAA 295
+ G L A L L D S+G + +AR KE A
Sbjct: 321 QRDGSGRHLLGCAGVAEGQQLPCGAQRLRASPDGSLGFSQGFE-DAREHPQVMKEAMVEA 379
Query: 296 GS--AKGKPKIEVYDKDRKKGPGAMITA-AKTYNPAADSILGLMEN---AASKDDEEKPM 349
A+ K K E +K RKK + A A +S+ EN K ++K
Sbjct: 380 NEVVAEVKRKQEKKEKKRKKREKRRLEALAAAAEEMENSVQEAEENNIEPKKKKKKKKEQ 439
Query: 350 EEVAA 354
E+ AA
Sbjct: 440 EQEAA 444
>UNIPROTKB|Q58105 [details] [associations]
symbol:MJ0694 "Uncharacterized NOP5 family protein MJ0694"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0005515
"protein binding" evidence=IPI] Pfam:PF01798 EMBL:L77117
GenomeReviews:L77117_GR eggNOG:COG1498 KO:K14564 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358
PIR:F64386 RefSeq:NP_247678.1 PDB:3T7Z PDBsum:3T7Z
ProteinModelPortal:Q58105 IntAct:Q58105 GeneID:1451561
KEGG:mja:MJ_0694 OMA:KYPNPPK ProtClustDB:PRK14552 Uniprot:Q58105
Length = 414
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 115/284 (40%), Positives = 164/284 (57%)
Query: 31 SHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNI 90
S L++ +K A + D +IIQ + DLDK LN + R+REWY +FPEL ++ +
Sbjct: 107 STELTKKVIKSYAQQKDKIIIQVAEAISDLDKTLNLLSERLREWYSLYFPELDHLVNKHE 166
Query: 91 LYAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVL 150
+YA + +G R N K +ILP ++ ++ EAA SMG E+ D DL I + +++
Sbjct: 167 VYANLITKLGKRKNFTKSQLKKILPSKLAGKIAEAAKNSMGGELEDYDLDVIVKFAEEIN 226
Query: 151 SLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAE 210
L E R +LY+YL+ MN APN+T L G +GARLI G L LAK P ST+Q+LGAE
Sbjct: 227 HLYEKRKELYNYLEKLMNEEAPNITKLAGVSLGARLIGLAGGLEKLAKMPASTIQVLGAE 286
Query: 211 KALFRALKTKHATPKYGLIYHASLVGQAAPK-HKGKISRSLASKTALAIRYDALGDGQDN 269
KALF L+ PK+G+IY+ L+ Q +P +GKI+R+LA K A+A R D +GD +
Sbjct: 287 KALFAHLRMGVEPPKHGIIYNHPLI-QGSPHWQRGKIARALACKLAIAARADYVGDYIAD 345
Query: 270 SMGLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYDKDRKK 313
+ LE KL R+ + K K KPK + +K KK
Sbjct: 346 EL-LE---KLNKRVEEIRRKYPKPPKKKKKEKPKAKKKEKKGKK 385
>UNIPROTKB|Q97ZH3 [details] [associations]
symbol:SSO0939 "Pre mRNA splicing protein" species:273057
"Sulfolobus solfataricus P2" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF01798 EMBL:AE006641 GenomeReviews:AE006641_GR
PDB:3ID5 PDB:3ID6 PDB:3PLA PDBsum:3ID5 PDBsum:3ID6 PDBsum:3PLA
eggNOG:COG1498 KO:K14564 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 ProtClustDB:PRK14552 PIR:H90244
RefSeq:NP_342425.1 PDB:3ICX PDBsum:3ICX ProteinModelPortal:Q97ZH3
DIP:DIP-48938N IntAct:Q97ZH3 GeneID:1455182 KEGG:sso:SSO0939
HOGENOM:HOG000227188 OMA:FLPASTI EvolutionaryTrace:Q97ZH3
Uniprot:Q97ZH3
Length = 412
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 106/261 (40%), Positives = 162/261 (62%)
Query: 30 LSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDN 89
LS +R KL+ +A K D + IQA+ +DD+DK +N ++ R+REWY HFPEL K+I+D+
Sbjct: 120 LSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDH 179
Query: 90 ILYAKAVKLMGDRSNAAKLDFSEI-LPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQ 148
YA V GDR E+ E+ ++ +AA S+G ++S+ DL ++ + +
Sbjct: 180 EEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANT 239
Query: 149 VLSLAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILG 208
+L L R L +YL+ M VAPN+TALVG +GARL++ GSL LAK P ST+Q+LG
Sbjct: 240 ILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTIQVLG 299
Query: 209 AEKALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQD 268
AEKALFRAL++ PK+G+I+ + + +GKI+R+LA+K A+A R DA G+
Sbjct: 300 AEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVDAFS-GR- 357
Query: 269 NSMGLENRAKLEARLRNLEGK 289
+G + +L+ R+ ++ K
Sbjct: 358 -FIGDQLNEQLKKRIDEIKEK 377
>ZFIN|ZDB-GENE-040426-1561 [details] [associations]
symbol:prpf31 "PRP31 pre-mRNA processing factor 31
homolog (yeast)" species:7955 "Danio rerio" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;IMP] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] [GO:0071339 "MLL1
complex" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
ZFIN:ZDB-GENE-040426-1561 GO:GO:0005681 GO:GO:0003723 GO:GO:0060041
GO:GO:0000398 GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358
EMBL:BC055531 IPI:IPI00508030 RefSeq:NP_956798.1 UniGene:Dr.76439
ProteinModelPortal:Q7SXM7 SMR:Q7SXM7 STRING:Q7SXM7 PRIDE:Q7SXM7
Ensembl:ENSDART00000137029 GeneID:393476 KEGG:dre:393476 CTD:26121
GeneTree:ENSGT00550000075069 HOGENOM:HOG000202033
HOVERGEN:HBG082193 InParanoid:Q7SXM7 KO:K12844 OMA:VESDPEY
OrthoDB:EOG4W6NW1 NextBio:20814506 ArrayExpress:Q7SXM7 Bgee:Q7SXM7
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 Uniprot:Q7SXM7
Length = 508
Score = 325 (119.5 bits), Expect = 5.4e-29, P = 5.4e-29
Identities = 71/242 (29%), Positives = 125/242 (51%)
Query: 43 ADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDR 102
AD +I+ A L ++D ELN VR+ Y FPEL ++ + + Y + VK +G+
Sbjct: 97 ADPEYRLIVAANNLTVEIDNELNIIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNN 156
Query: 103 SNAAKLD--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLY 160
K + +IL + A + GT + D +L ++E CD L L + + ++Y
Sbjct: 157 LEKCKNNETLQQILTNATIMVVSVTASTTQGTMLGDDELQRLEEACDMALELNQSKHRIY 216
Query: 161 DYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTK 220
+Y++SRM+ +APNL+ +VG A+++ G L NL+K P + +LGA++ +
Sbjct: 217 EYVESRMSFIAPNLSIIVGASTAAKIMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSST 276
Query: 221 HATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLE 280
P G IYH +V P + K +R +++K LA R D+ + D +G + + ++E
Sbjct: 277 SLLPHTGYIYHCDVVQTLPPDLRRKAARLVSAKCTLASRVDSFHESADGKVGYDLKEEIE 336
Query: 281 AR 282
+
Sbjct: 337 RK 338
>UNIPROTKB|F1RNI3 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:FP476135 RefSeq:XP_003127461.2 Ensembl:ENSSSCT00000003624
GeneID:100520791 KEGG:ssc:100520791 Uniprot:F1RNI3
Length = 499
Score = 323 (118.8 bits), Expect = 8.0e-29, P = 8.0e-29
Identities = 67/236 (28%), Positives = 125/236 (52%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++SD +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 282
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>MGI|MGI:1916238 [details] [associations]
symbol:Prpf31 "PRP31 pre-mRNA processing factor 31 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=ISO;ISA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal body"
evidence=ISA] [GO:0016607 "nuclear speck" evidence=ISA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=ISA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=ISA] [GO:0070990 "snRNP
binding" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR027105 MGI:MGI:1916238 Pfam:PF01798 GO:GO:0016607
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0015030
GO:GO:0043021 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
EMBL:AC130680 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AY040823 EMBL:AK005294
EMBL:AK033190 EMBL:AK033283 EMBL:AK044398 EMBL:AK044457
EMBL:AK051260 EMBL:CT010189 EMBL:BC018376 EMBL:BC057877
EMBL:BC061461 IPI:IPI00331424 IPI:IPI00459791 IPI:IPI00625183
IPI:IPI00742282 IPI:IPI00742413 RefSeq:NP_001153186.1
RefSeq:NP_081604.3 UniGene:Mm.246863 ProteinModelPortal:Q8CCF0
SMR:Q8CCF0 STRING:Q8CCF0 PhosphoSite:Q8CCF0 PaxDb:Q8CCF0
PRIDE:Q8CCF0 DNASU:68988 Ensembl:ENSMUST00000008517
Ensembl:ENSMUST00000108636 Ensembl:ENSMUST00000179769 GeneID:68988
KEGG:mmu:68988 UCSC:uc009evi.2 UCSC:uc012ewf.1 InParanoid:Q8CCF0
NextBio:328355 Bgee:Q8CCF0 Genevestigator:Q8CCF0
GermOnline:ENSMUSG00000008373 Uniprot:Q8CCF0
Length = 499
Score = 323 (118.8 bits), Expect = 8.0e-29, P = 8.0e-29
Identities = 67/236 (28%), Positives = 125/236 (52%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++SD +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 282
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>UNIPROTKB|E7ESA8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 IPI:IPI00738596
HGNC:HGNC:15446 ProteinModelPortal:E7ESA8 SMR:E7ESA8 PRIDE:E7ESA8
Ensembl:ENST00000419967 UCSC:uc010yek.1 ArrayExpress:E7ESA8
Bgee:E7ESA8 Uniprot:E7ESA8
Length = 450
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 66/236 (27%), Positives = 125/236 (52%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 282
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>UNIPROTKB|Q6NVP6 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0071339 "MLL1
complex" evidence=ISS] InterPro:IPR027105 Pfam:PF01798
GO:GO:0005681 GO:GO:0003723 GO:GO:0060041 GO:GO:0000398
GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 EMBL:BC067959 RefSeq:NP_998859.1
UniGene:Str.66282 ProteinModelPortal:Q6NVP6 SMR:Q6NVP6
STRING:Q6NVP6 Ensembl:ENSXETT00000023852 GeneID:407890
KEGG:xtr:407890 Xenbase:XB-GENE-489336 InParanoid:Q6NVP6
OMA:ESTEGKX Bgee:Q6NVP6 Uniprot:Q6NVP6
Length = 498
Score = 321 (118.1 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 67/236 (28%), Positives = 125/236 (52%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 91 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKN 150
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G +++D +L I+E CD L L + + ++Y+Y++SR
Sbjct: 151 NENLQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESR 210
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ +VG A+++ G L NL+K P V +LGA++ + P
Sbjct: 211 MSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLSGFSSTSVLPHT 270
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 282
G IYH+ +V P K +R +++K LA R D+ + + +G + + ++E +
Sbjct: 271 GYIYHSDIVQSLPPDLHRKAARLVSAKCTLAARVDSFHESSEGKVGYDLKEEIERK 326
>POMBASE|SPBC119.13c [details] [associations]
symbol:prp31 "U4/U6 x U5 tri-snRNP complex subunit
Prp31" species:4896 "Schizosaccharomyces pombe" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0007126
"meiosis" evidence=NAS] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] InterPro:IPR027105 PomBase:SPBC119.13c
Pfam:PF01798 GO:GO:0007126 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0046540
GO:GO:0045292 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 PIR:T39311 RefSeq:NP_595294.1
ProteinModelPortal:O42904 IntAct:O42904 STRING:O42904
EnsemblFungi:SPBC119.13c.1 GeneID:2540045 KEGG:spo:SPBC119.13c
OMA:RDHYSIR OrthoDB:EOG4ZCXDV NextBio:20801182 Uniprot:O42904
Length = 518
Score = 304 (112.1 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 70/240 (29%), Positives = 121/240 (50%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVK-LMGDRSNA-A 106
+I+ + + ++D E+ V+EWY FPEL+ ++ + Y K V L+ D N+
Sbjct: 119 LIVDSNSIAMEIDDEILRLHRLVKEWYHDRFPELSSLVLNAFDYCKTVSSLLNDLDNSKT 178
Query: 107 KLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
KL F LP + A ++G + D + N+K C+ + L E + ++ +Y++SR
Sbjct: 179 KLSF---LPSATVMVIATTATTTVGKPLPDEMIKNVKNCCEAIQQLGEEKQKIIEYVQSR 235
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
++ VAPNL+A+VG A LI G L L K P + LG + + + Y
Sbjct: 236 ISVVAPNLSAVVGSTTAANLIGIAGGLTRLGKFPACNLPALGKRRLTTIGINNPAVSGDY 295
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNL 286
G +Y + +V + P + + R A+K ALA R D++ + D S G+ R ++E ++ L
Sbjct: 296 GFLYMSEIVQKTPPDVRKQAIRMTAAKVALAARIDSIHEYPDGSFGISARKEVERKIEKL 355
Score = 37 (18.1 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 298 AKGKPKIEVYDKDRKKGPGAM 318
A GK + EV++ D +G G +
Sbjct: 403 AFGKEEAEVFNFDETEGLGML 423
>UNIPROTKB|E1BM48 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
CTD:26121 GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:DAAA02047818 IPI:IPI00691365 RefSeq:NP_001193214.1
UniGene:Bt.5160 Ensembl:ENSBTAT00000010198 GeneID:513577
KEGG:bta:513577 NextBio:20870922 Uniprot:E1BM48
Length = 499
Score = 319 (117.4 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 66/236 (27%), Positives = 125/236 (52%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 282
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>UNIPROTKB|F1PKI0 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0070990 "snRNP binding" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA] [GO:0005687
"U4 snRNP" evidence=IEA] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
GO:GO:0016607 GO:GO:0000244 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005687 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 CTD:26121 GeneTree:ENSGT00550000075069
KO:K12844 OMA:VESDPEY InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AAEX03000741 RefSeq:XP_850917.1
Ensembl:ENSCAFT00000004264 GeneID:476389 KEGG:cfa:476389
Uniprot:F1PKI0
Length = 499
Score = 319 (117.4 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 66/236 (27%), Positives = 125/236 (52%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 282
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>UNIPROTKB|Q8WWY3 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IMP;IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0015030 "Cajal body"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IDA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070990 "snRNP binding" evidence=IPI] [GO:0005690
"U4atac snRNP" evidence=TAS] [GO:0005687 "U4 snRNP" evidence=IDA]
[GO:0005684 "U2-type spliceosomal complex" evidence=IC]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0003723 Orphanet:791 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005684 GO:GO:0005687 EMBL:AC012314 PDB:2OZB
PDB:3SIU PDB:3SIV PDBsum:2OZB PDBsum:3SIU PDBsum:3SIV
eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193
KO:K12844 OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY040822 EMBL:AF308303
EMBL:AL050369 EMBL:AK098547 EMBL:BC117389 IPI:IPI00167198
IPI:IPI00292000 IPI:IPI00738596 RefSeq:NP_056444.3
UniGene:Hs.515598 ProteinModelPortal:Q8WWY3 SMR:Q8WWY3
IntAct:Q8WWY3 STRING:Q8WWY3 PhosphoSite:Q8WWY3 DMDM:90101442
PaxDb:Q8WWY3 PRIDE:Q8WWY3 DNASU:26121 Ensembl:ENST00000321030
Ensembl:ENST00000571534 Ensembl:ENST00000571610
Ensembl:ENST00000572776 Ensembl:ENST00000574214
Ensembl:ENST00000576100 Ensembl:ENST00000576581
Ensembl:ENST00000576817 Ensembl:ENST00000576989 GeneID:26121
KEGG:hsa:26121 UCSC:uc002qdh.2 GeneCards:GC19P054618
H-InvDB:HIX0027609 H-InvDB:HIX0137464 HGNC:HGNC:15446 HPA:HPA041939
MIM:600138 MIM:606419 neXtProt:NX_Q8WWY3 PharmGKB:PA33814
HOGENOM:HOG000207983 InParanoid:Q8WWY3 PhylomeDB:Q8WWY3
EvolutionaryTrace:Q8WWY3 GenomeRNAi:26121 NextBio:48131
ArrayExpress:Q8WWY3 Bgee:Q8WWY3 CleanEx:HS_PRPF31
Genevestigator:Q8WWY3 GermOnline:ENSG00000105618 GO:GO:0005690
GO:GO:0070990 Uniprot:Q8WWY3
Length = 499
Score = 319 (117.4 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 66/236 (27%), Positives = 125/236 (52%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 282
G IYH+ +V P + K +R +A+K LA R D+ + + +G E + ++E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERK 327
>FB|FBgn0036487 [details] [associations]
symbol:Prp31 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0000244 "assembly
of spliceosomal tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR027105 Pfam:PF01798 EMBL:AE014296 GO:GO:0022008
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HSSP:O28191
EMBL:AY051928 RefSeq:NP_648756.1 UniGene:Dm.9673 SMR:Q9VUM1
STRING:Q9VUM1 EnsemblMetazoa:FBtr0075642 GeneID:39655
KEGG:dme:Dmel_CG6876 UCSC:CG6876-RA CTD:39655 FlyBase:FBgn0036487
InParanoid:Q9VUM1 OrthoDB:EOG4JWSVZ GenomeRNAi:39655 NextBio:814716
Uniprot:Q9VUM1
Length = 501
Score = 319 (117.4 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 72/241 (29%), Positives = 123/241 (51%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A + D+D E++ +E Y FPEL +I I Y AVK +G+ + K
Sbjct: 100 LIVDANAIAVDIDNEISIVHKFTKEKYQKRFPELDSLIVGEIEYLLAVKELGNDLDQVKN 159
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ IL + + A + GT ++ + I E C+ + L +++++Y+Y++SR
Sbjct: 160 NEKLQAILTQATIMIVSVTASTTQGTMLTPAEKAKIDEACEMAIELNNFKSKIYEYVESR 219
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M +APNL+ +VG A+L+ G L L+K P VQ+LGA+K P
Sbjct: 220 MTFIAPNLSMIVGASTAAKLLGIAGGLSKLSKMPACNVQVLGAQKKTLSGFSQTQMLPHT 279
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNL 286
G +Y++ +V AP + K +R +A+K+ LA R DA + +GL + +E +L L
Sbjct: 280 GYVYYSQIVQDTAPDLRRKAARLVAAKSVLAARVDACHESVHGEIGLRFKEDVEKKLDKL 339
Query: 287 E 287
+
Sbjct: 340 Q 340
>UNIPROTKB|Q5U5C5 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 GO:GO:0071339
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:BC084759
RefSeq:NP_001088437.1 UniGene:Xl.48511 ProteinModelPortal:Q5U5C5
SMR:Q5U5C5 GeneID:495301 KEGG:xla:495301 Xenbase:XB-GENE-865857
Uniprot:Q5U5C5
Length = 498
Score = 316 (116.3 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 69/238 (28%), Positives = 129/238 (54%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 91 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKN 150
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G +++D +L I+E CD L L + + ++Y+Y++SR
Sbjct: 151 NENLQQILTNATIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESR 210
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ +VG A+++ G L NL+K P V +LGA++ + P
Sbjct: 211 MSFIAPNLSIIVGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLTGFSSTSVLPHT 270
Query: 227 GLIYHASLVGQAAPK--HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEAR 282
G IYH+ +V Q+ P H+ K +R +++K LA R D+ + + +G + + ++E +
Sbjct: 271 GYIYHSEIV-QSLPSDLHR-KAARLVSAKCTLASRVDSFHENPEGKIGYDLKEEIERK 326
>UNIPROTKB|E7EVX8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HGNC:HGNC:15446
IPI:IPI00657721 ProteinModelPortal:E7EVX8 SMR:E7EVX8 PRIDE:E7EVX8
Ensembl:ENST00000391755 ArrayExpress:E7EVX8 Bgee:E7EVX8
Uniprot:E7EVX8
Length = 493
Score = 306 (112.8 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 64/230 (27%), Positives = 120/230 (52%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 227 GLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENR 276
G IYH+ +V P + K +R +A+K LA R D+ + + +E +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKDEIERK 321
>WB|WBGene00022458 [details] [associations]
symbol:prp-31 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR027105 Pfam:PF01798
GO:GO:0009792 GO:GO:0002009 GO:GO:0016477 GO:GO:0008406
GO:GO:0018996 GO:GO:0042127 EMBL:FO080728 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 GO:GO:0001703 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 RefSeq:NP_491527.1 ProteinModelPortal:Q9N592
SMR:Q9N592 STRING:Q9N592 PaxDb:Q9N592 EnsemblMetazoa:Y110A7A.8
GeneID:172146 KEGG:cel:CELE_Y110A7A.8 UCSC:Y110A7A.8.2 CTD:172146
WormBase:Y110A7A.8 InParanoid:Q9N592 NextBio:874215 Uniprot:Q9N592
Length = 504
Score = 281 (104.0 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 80/277 (28%), Positives = 124/277 (44%)
Query: 43 ADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDR 102
AD +I++ + D+D E+N VR+ Y FPEL ++ + + Y V+L+G+
Sbjct: 95 ADPQYKLIVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLLGNE 154
Query: 103 SNA--AKLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLY 160
N+ K IL + + G ++ +L + + C+ L R +++
Sbjct: 155 INSKVVKEQLGGILDASTCMVVSVTVSTTQGVKLEPNELETVMDACNLAAQLHVNRLEMH 214
Query: 161 DYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTK 220
++ RM +APNL AL+G A L++ G L LA P VQ+LG K T
Sbjct: 215 QLVEWRMALIAPNLVALLGSTTTAHLVSQAGGLSPLATMPSCNVQVLGKTKKNLIGFSTV 274
Query: 221 HATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLE 280
P +G IY LV + P K K ++ LA+K L R DA + + G E A +E
Sbjct: 275 STNPHHGFIYFHQLVQKMPPDLKNKAAKILAAKVTLVARIDAQHESSNGEKGAEFLALVE 334
Query: 281 ARLRN-LEGKELGRAAGSAKGKPKIEVYDKDRKKGPG 316
++ LE + A A KP DK KK G
Sbjct: 335 SKFEKMLEPPPV--KANKALPKP----LDKASKKRGG 365
>TAIR|locus:2195698 [details] [associations]
symbol:emb1220 "AT1G60170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=NAS] InterPro:IPR027105 Pfam:PF01798
EMBL:CP002684 GO:GO:0003676 GO:GO:0030529 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY080777
EMBL:AY117155 EMBL:AY084782 IPI:IPI00547292 RefSeq:NP_564754.1
UniGene:At.21797 ProteinModelPortal:Q8RXN6 SMR:Q8RXN6 STRING:Q8RXN6
PRIDE:Q8RXN6 EnsemblPlants:AT1G60170.1 GeneID:842312
KEGG:ath:AT1G60170 TAIR:At1g60170 InParanoid:Q8RXN6
PhylomeDB:Q8RXN6 ProtClustDB:CLSN2688931 ArrayExpress:Q8RXN6
Genevestigator:Q8RXN6 Uniprot:Q8RXN6
Length = 485
Score = 277 (102.6 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 69/266 (25%), Positives = 132/266 (49%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ L D++ E+ +++ Y F EL ++ I YA VK +G+ ++ A +
Sbjct: 95 LIVDCNQLSVDIENEIVIVHNFIKDKYKLKFQELESLVHHPIDYACVVKKIGNETDLALV 154
Query: 109 DFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMN 168
D +++LP + + A+ + G+ + + L + E CD+ L L R ++ ++++S+M
Sbjct: 155 DLADLLPSAIIMVVSVTALTTKGSALPEDVLQKVLEACDRALDLDSARKKVLEFVESKMG 214
Query: 169 TVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGL 228
++APNL+A+VG V A+L+ G L LAK P VQ+LG ++ + + + G
Sbjct: 215 SIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGY 274
Query: 229 IYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEG 288
+ + P + + R +A+K+ LA R DA + + +G+ +A E + +E
Sbjct: 275 LEQTEIYQSTPPGLQARAGRLVAAKSTLAARVDAT---RGDPLGISGKAFREEIRKKIEK 331
Query: 289 KELGRAAGSAKGKPKIEVYDKDRKKG 314
+ A K P + K R+ G
Sbjct: 332 WQEPPPARQPKPLPVPDSEPKKRRGG 357
>UNIPROTKB|E7EN72 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 IPI:IPI00167198 HGNC:HGNC:15446
ProteinModelPortal:E7EN72 SMR:E7EN72 PRIDE:E7EN72
Ensembl:ENST00000445811 ArrayExpress:E7EN72 Bgee:E7EN72
Uniprot:E7EN72
Length = 284
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 56/194 (28%), Positives = 104/194 (53%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 227 GLIYHASLVGQAAP 240
G IYH+ +V Q+ P
Sbjct: 272 GYIYHSDIV-QSLP 284
>UNIPROTKB|E7ESX0 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 HGNC:HGNC:15446 IPI:IPI00657783
ProteinModelPortal:E7ESX0 SMR:E7ESX0 PRIDE:E7ESX0
Ensembl:ENST00000445124 ArrayExpress:E7ESX0 Bgee:E7ESX0
Uniprot:E7ESX0
Length = 276
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 53/185 (28%), Positives = 98/185 (52%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKY 226
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++ + P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 227 GLIYH 231
G IYH
Sbjct: 272 GYIYH 276
>DICTYBASE|DDB_G0289595 [details] [associations]
symbol:prpf31 "pre-mRNA processing factor 31"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA;ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IEA;ISS] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] InterPro:IPR027105
dictyBase:DDB_G0289595 Pfam:PF01798 GenomeReviews:CM000154_GR
GO:GO:0000398 GO:GO:0046540 EMBL:AAFI02000146 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 OMA:RDHYSIR
RefSeq:XP_002649103.1 EnsemblProtists:DDB0304959 GeneID:8627218
KEGG:ddi:DDB_G0289595 ProtClustDB:CLSZ2735590 Uniprot:C7G068
Length = 460
Score = 255 (94.8 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 87/326 (26%), Positives = 147/326 (45%)
Query: 33 SLSRYKLKFSADKVD-TMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNIL 91
SL +K D + +I++ + ++ E+ VRE Y FPEL +Q+ +
Sbjct: 56 SLPEKGVKTGQDSEEHKLIVECNQMAQEIQHEIYLIHKFVRERYSKKFPELESSVQNPLD 115
Query: 92 YAKAVKLMGDRSNAAKLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLS 151
Y VK + + ++ + +++LP+ L + G ++ +L+ + + CD L
Sbjct: 116 YINCVKRIKNENDLINVQLNDLLPKSTIMVLLVTLSSTAGKNLTQEELMRVIDACDMGLE 175
Query: 152 LAEYRAQLYDYLKSRMNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEK 211
L ++ + YL+SRM +APNL+ L+G + ++LI GS+ LA P +Q LGA+K
Sbjct: 176 LDLHKKNILHYLESRMTYIAPNLSVLMGSSIASKLIGIAGSIQQLANIPAGHLQTLGADK 235
Query: 212 -ALFRALKTKHATPKYGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNS 270
AL + + GLI +V +A P + K R+L + ++A R DA QD+S
Sbjct: 236 KALAGFSGMSNRKFQMGLISQCDIVKKAPPFLQVKALRTLTGRVSIAARVDAQ---QDSS 292
Query: 271 M-GLENRAKLEARLRNLEGKELGRAAGSAKGKPKIEVYDKDRKKGPGAMITAAKTYNPAA 329
G R + L +E + K P E + ++ G A + K Y
Sbjct: 293 FYGETGRQYRDEILAKIEKWQEPPPQKQDKALPAPEEGKRTKRGGKKARLYKQK-YG-VT 350
Query: 330 DSILGLMENAASKDDEEKPMEEVAAG 355
D +N S EEK + E G
Sbjct: 351 D--FQKAKNRMSFGVEEKTIGESGIG 374
>UNIPROTKB|E7EU94 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 HGNC:HGNC:15446 IPI:IPI00657750
ProteinModelPortal:E7EU94 SMR:E7EU94 PRIDE:E7EU94
Ensembl:ENST00000447810 ArrayExpress:E7EU94 Bgee:E7EU94
Uniprot:E7EU94
Length = 261
Score = 236 (88.1 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 48/165 (29%), Positives = 92/165 (55%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 151
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++S+ +L ++E CD L L + ++Y+Y++SR
Sbjct: 152 NENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEK 211
M+ +APNL+ ++G A+++ G L NL+K P + +LGA++
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQR 256
>GENEDB_PFALCIPARUM|PFD0450c [details] [associations]
symbol:PFD0450c "pre-mrna splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0005681 EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 KO:K12844 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 HOGENOM:HOG000207983
RefSeq:XP_002808648.1 EnsemblProtists:PFD0450c:mRNA GeneID:812409
KEGG:pfa:PFD0450c EuPathDB:PlasmoDB:PF3D7_0409100
ProtClustDB:CLSZ2433500 Uniprot:C0H4A0
Length = 534
Score = 253 (94.1 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 73/242 (30%), Positives = 119/242 (49%)
Query: 47 DTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAA 106
D MI + + + +D E+ V++ Y FPEL I+ + Y V + + +
Sbjct: 152 DVMIEKCMETILKIDTEILNIHKYVKDIYSTKFPELDSIVYSPVEYISVVNKIRNEVDLK 211
Query: 107 KLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+DFS+ILP + A+ ++ G + D L N C++ + L EYR + YL+S+
Sbjct: 212 NIDFSDILPNTTVMAITVASSMTTGICLPDNLLKNCISFCNEGIQLNEYRNIILLYLESK 271
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAK-QPGSTVQILGAEKALFRALKTKHATPK 225
M +APN+T L+G + ARLI+ GSL NL+ + + I +K+LF L H T
Sbjct: 272 MFYLAPNVTMLLGSSLTARLISAVGSLKNLSIISSQNLIVIASTKKSLF-GLSNVHKTLG 330
Query: 226 YGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRN 285
G++ + +V +K K LASK +LA R D ++ GL R + + L
Sbjct: 331 IGILCCSEIVQSVPDAYKKKAISLLASKCSLAARIDYFKKYKEGQYGLLLRQYIISHLIK 390
Query: 286 LE 287
L+
Sbjct: 391 LQ 392
>UNIPROTKB|C0H4A0 [details] [associations]
symbol:PFD0450c "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380 GO:GO:0005681
EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 KO:K12844 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 HOGENOM:HOG000207983 RefSeq:XP_002808648.1
EnsemblProtists:PFD0450c:mRNA GeneID:812409 KEGG:pfa:PFD0450c
EuPathDB:PlasmoDB:PF3D7_0409100 ProtClustDB:CLSZ2433500
Uniprot:C0H4A0
Length = 534
Score = 253 (94.1 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 73/242 (30%), Positives = 119/242 (49%)
Query: 47 DTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAA 106
D MI + + + +D E+ V++ Y FPEL I+ + Y V + + +
Sbjct: 152 DVMIEKCMETILKIDTEILNIHKYVKDIYSTKFPELDSIVYSPVEYISVVNKIRNEVDLK 211
Query: 107 KLDFSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+DFS+ILP + A+ ++ G + D L N C++ + L EYR + YL+S+
Sbjct: 212 NIDFSDILPNTTVMAITVASSMTTGICLPDNLLKNCISFCNEGIQLNEYRNIILLYLESK 271
Query: 167 MNTVAPNLTALVGELVGARLIAHGGSLLNLAK-QPGSTVQILGAEKALFRALKTKHATPK 225
M +APN+T L+G + ARLI+ GSL NL+ + + I +K+LF L H T
Sbjct: 272 MFYLAPNVTMLLGSSLTARLISAVGSLKNLSIISSQNLIVIASTKKSLF-GLSNVHKTLG 330
Query: 226 YGLIYHASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRN 285
G++ + +V +K K LASK +LA R D ++ GL R + + L
Sbjct: 331 IGILCCSEIVQSVPDAYKKKAISLLASKCSLAARIDYFKKYKEGQYGLLLRQYIISHLIK 390
Query: 286 LE 287
L+
Sbjct: 391 LQ 392
>RGD|1305832 [details] [associations]
symbol:Prpf31 "PRP31 pre-mRNA processing factor 31 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=IEA;ISO] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005687 "U4 snRNP" evidence=ISO]
[GO:0015030 "Cajal body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=ISO] [GO:0043021 "ribonucleoprotein complex binding"
evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA;ISO] [GO:0070990 "snRNP binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR027105
Pfam:PF01798 RGD:1305832 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PANTHER:PTHR13904 EMBL:AC103574
IPI:IPI00948419 Ensembl:ENSRNOT00000064433 UCSC:RGD:1305832
ArrayExpress:F1M5K0 Uniprot:F1M5K0
Length = 195
Score = 189 (71.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 40/141 (28%), Positives = 78/141 (55%)
Query: 49 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKL 108
+I+ A L +++ ELN +R+ Y FPEL ++ + + Y + VK +G+ + K
Sbjct: 40 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKN 99
Query: 109 D--FSEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSR 166
+ +IL + A + G ++SD +L ++E CD L L + ++Y+Y++SR
Sbjct: 100 NENLQQILTNATIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESR 159
Query: 167 MNTVAPNLTALVGELVGARLI 187
M+ +APNL+ ++G A+++
Sbjct: 160 MSFIAPNLSIIIGASTAAKIM 180
>ASPGD|ASPL0000059636 [details] [associations]
symbol:AN1260 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:BN001308
EMBL:AACD01000017 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 OMA:RDHYSIR OrthoDB:EOG4ZCXDV
RefSeq:XP_658864.1 ProteinModelPortal:Q5BDX0 STRING:Q5BDX0
EnsemblFungi:CADANIAT00001363 GeneID:2877039 KEGG:ani:AN1260.2
Uniprot:Q5BDX0
Length = 521
Score = 202 (76.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 69/273 (25%), Positives = 118/273 (43%)
Query: 63 ELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGD------------RSNAAKLDF 110
EL +R+ Y FPEL ++ ++I YAK V ++ + N +
Sbjct: 56 ELTRLHKSLRDHYSIRFPELETLVTNSIDYAKTVAILKNGPLTDIKALSTSADNMVGVPL 115
Query: 111 SEILPEEVEAQLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLKSRMNTV 170
IL + + G E+++ +L + + C+++L L R L +++ MN +
Sbjct: 116 KSILDGPTLMVVAVEGTTTRGREMTEAELKVVMDTCERILKLDRERTALTQSIQANMNQI 175
Query: 171 APNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIY 230
APNL ALVG A+ + G L LAK P + G+++ T + G +Y
Sbjct: 176 APNLAALVGPETAAQFLNQTGGLRELAKIPACNLGAQGSKRKDGLGFATNTSIRSQGFLY 235
Query: 231 HASLVGQAAPKHKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRNLEGKE 290
++ L+ K + R +++K LA+R D D S+G + + + RL L E
Sbjct: 236 NSELIQDIPNDLKRQAIRIVSAKMVLAVRADVSKYSPDGSLGEDLKQQCFQRLEKLT--E 293
Query: 291 LGRAAGSAKGKPKIEVYDKDRKKGPGAMITAAK 323
+G+ K P + DK +K G AK
Sbjct: 294 PPPNSGT-KALPAPD--DKPSRKRGGRRARKAK 323
>SGD|S000003323 [details] [associations]
symbol:PRP31 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000387 "spliceosomal snRNP assembly" evidence=IMP;IDA]
[GO:0046540 "U4/U6 x U5 tri-snRNP complex" evidence=IEA;IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IPI]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR027105
SGD:S000003323 Pfam:PF01798 GO:GO:0005739 EMBL:BK006941
GO:GO:0005681 GO:GO:0003723 GO:GO:0000387 GO:GO:0046540
eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
PROSITE:PS51358 GeneTree:ENSGT00550000075069 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 OrthoDB:EOG4ZCXDV
EMBL:U31970 EMBL:Z72876 EMBL:AY723814 PIR:S64386 RefSeq:NP_011605.1
ProteinModelPortal:P49704 SMR:P49704 DIP:DIP-5355N IntAct:P49704
MINT:MINT-493013 STRING:P49704 PaxDb:P49704 EnsemblFungi:YGR091W
GeneID:852983 KEGG:sce:YGR091W CYGD:YGR091w HOGENOM:HOG000000957
OMA:HRISEAN NextBio:972794 Genevestigator:P49704 GermOnline:YGR091W
Uniprot:P49704
Length = 494
Score = 198 (74.8 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 83/331 (25%), Positives = 159/331 (48%)
Query: 1 MELMRGVRSQLTELISGLAGQDLQPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDL 60
+EL R + + +S + P + L L + ++ F K+ + I L+
Sbjct: 51 IELFRTLALISPDRLSLSETAQILPKIVDLKRILQQQEIDFI--KLLPFFNEIIPLIKSN 108
Query: 61 DKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGDRSNAAKLDFSEILPE-EVE 119
K ++ + + + Y FPEL+ +I + Y+K + ++ + N +K + E+ E +
Sbjct: 109 IKLMHNFLISL---YSRRFPELSSLIPSPLQYSKVISIL-ENENYSKNESDELFFHLENK 164
Query: 120 AQL-KEAAMI---SMGTEVSDLDLLNIKELCDQVL---SLAE--YRAQ--LYDYLKSRMN 168
A+L +E ++ SM T + + L+IK Q+L S+ E ++ Q + Y+ S+++
Sbjct: 165 AKLTREQILVLTMSMKTSFKNKEPLDIKTRT-QILEANSILENLWKLQEDIGQYIASKIS 223
Query: 169 TVAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKT-KHATPKYG 227
+APN+ LVG + A+LIAH G +L ++ P + +G K L L T + + G
Sbjct: 224 IIAPNVCFLVGPEIAAQLIAHAGGVLEFSRIPSCNIASIGKNKHLSHELHTLESGVRQEG 283
Query: 228 LIYHASLVGQAAPK--HKGKISRSLASKTALAIRYDALGDGQDNSMGLENRAKLEARLRN 285
++ + ++ Q P HK ++ R L +K +LA R DA D + L ++ K E +
Sbjct: 284 YLFASDMI-QKFPVSVHK-QMLRMLCAKVSLAARVDAGQKNGDRNTVLAHKWKAEL---S 338
Query: 286 LEGKELGRAAGSAKGKPKIEVYDKDRKKGPG 316
+ ++L A ++ K D+ +KK G
Sbjct: 339 KKARKLSEAPSISETKALPIPEDQPKKKRAG 369
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 441 367 0.00084 117 3 11 23 0.45 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 600 (64 KB)
Total size of DFA: 195 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.43u 0.16s 31.59t Elapsed: 00:00:01
Total cpu time: 31.44u 0.16s 31.60t Elapsed: 00:00:01
Start: Sat May 11 01:15:19 2013 End: Sat May 11 01:15:20 2013