BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013526
(441 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/412 (51%), Positives = 283/412 (68%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K AD GKL S A + D+ G TLRY AG ADKI G
Sbjct: 85 RGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT 144
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+
Sbjct: 145 IPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALH 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK
Sbjct: 205 MGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLK 264
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ V
Sbjct: 265 RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSV 324
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L +P
Sbjct: 325 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 384
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS
Sbjct: 385 TVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVS 444
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 445 SALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/412 (50%), Positives = 274/412 (66%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L K AD GK A D+ G TLRYYAG ADKIHG
Sbjct: 83 RGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMT 142
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + +T EPIGV G IIPWNFP MF K++PAL G T+++KPAEQTPL ALY
Sbjct: 143 IPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALY 202
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
L K AG P GV+N++PG+GPTAGAAIASH+ IDK++FTGST+VG+ + +AA SNLK
Sbjct: 203 MGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLK 262
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LELGGKSP +IF D D++ A + A G+ FN+G+ C A SR++V+E IY+EF K+ V
Sbjct: 263 RVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSV 322
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
E+AK +VG PFDP QGPQ+DKKQ+++IL I+ G EGA L EP
Sbjct: 323 ERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEP 382
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F+NVT+DM IAK EIFGPV +++FKT++E I+ ANN+ +GL A + T D+N A VS
Sbjct: 383 TVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVS 442
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+++AG +WINCY A ++ P+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 443 SAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKI 494
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/426 (49%), Positives = 275/426 (64%), Gaps = 8/426 (1%)
Query: 11 RRLITVHGHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 69
RR+ H RG +L + AD GK + + + D+ L
Sbjct: 77 RRMDASH-------RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCL 129
Query: 70 RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 129
RYYAG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +
Sbjct: 130 RYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 130 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTF 309
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309
VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369
Query: 310 XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 429
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
+ TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK
Sbjct: 430 AVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 430 SVVTPI 435
+V +
Sbjct: 490 TVTVKV 495
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/426 (49%), Positives = 275/426 (64%), Gaps = 8/426 (1%)
Query: 11 RRLITVHGHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 69
RR+ H RG +L + AD GK + + + D+ L
Sbjct: 71 RRMDASH-------RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCL 123
Query: 70 RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 129
RYYAG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +
Sbjct: 124 RYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 183
Query: 130 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++
Sbjct: 184 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 243
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +
Sbjct: 244 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTF 303
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309
VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 304 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 363
Query: 310 XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA
Sbjct: 364 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 423
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
+ TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK
Sbjct: 424 AVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 483
Query: 430 SVVTPI 435
+V +
Sbjct: 484 TVTVKV 489
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/409 (49%), Positives = 272/409 (66%)
Query: 27 IMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
++ K AD GK+ + A + D+ LRY AG ADKI G + +
Sbjct: 88 LIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPV 147
Query: 87 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146
YT EPIGV G I PWN P + K+ PAL G T+IVKPAEQTPL AL+ A
Sbjct: 148 DGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVAS 207
Query: 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 206
L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AAA SNLK V+
Sbjct: 208 LIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVT 267
Query: 207 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 266
LELG K+P ++F D D+++A + A G+ N+G+ C+A+S+++V+E IYDEF ++ VE+A
Sbjct: 268 LELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERA 327
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 326
K +V G+P P V GPQ++K Q ++I+ IE GK+EGA L +PT+F
Sbjct: 328 KKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVF 387
Query: 327 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386
+NVT+DM IAK EIFGPV +MKFK+++E IK ANNT YGL AG+ TKDL+ A TVS ++
Sbjct: 388 SNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSAL 447
Query: 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
+AG +W+NCY A + P GG+KMSG GR+ G +H Y +VK+V I
Sbjct: 448 QAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTVTMKI 496
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 413 bits (1062), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/426 (49%), Positives = 274/426 (64%), Gaps = 8/426 (1%)
Query: 11 RRLITVHGHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 69
RR+ H RG +L + AD GK + + + D+ L
Sbjct: 77 RRMDASH-------RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCL 129
Query: 70 RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 129
RYYAG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +
Sbjct: 130 RYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 130 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+F GST++
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEI 249
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTF 309
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309
VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369
Query: 310 XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 429
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
+ TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK
Sbjct: 430 AVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 430 SVVTPI 435
+V +
Sbjct: 490 TVTVKV 495
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 413 bits (1062), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/426 (49%), Positives = 275/426 (64%), Gaps = 8/426 (1%)
Query: 11 RRLITVHGHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 69
RR+ H RG +L + AD GK + + + D+ L
Sbjct: 77 RRMDASH-------RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCL 129
Query: 70 RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 129
RYYAG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +
Sbjct: 130 RYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 130 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTF 309
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309
VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369
Query: 310 XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 429
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
+ TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG G++ G L Y +VK
Sbjct: 430 AVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGQELGEYGLQAYTEVK 489
Query: 430 SVVTPI 435
+V +
Sbjct: 490 TVTVKV 495
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/426 (49%), Positives = 275/426 (64%), Gaps = 8/426 (1%)
Query: 11 RRLITVHGHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 69
RR+ H RG +L + AD GK + + + D+ L
Sbjct: 77 RRMDASH-------RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCL 129
Query: 70 RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 129
RYYAG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +
Sbjct: 130 RYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 130 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
GR + AA +SNLK V+L+LGGKSP +I D D++ A + A + FN+G+ C A SR +
Sbjct: 250 GRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTF 309
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309
VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369
Query: 310 XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 429
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
+ TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK
Sbjct: 430 AVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 430 SVVTPI 435
+V +
Sbjct: 490 TVTVKV 495
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/426 (49%), Positives = 274/426 (64%), Gaps = 8/426 (1%)
Query: 11 RRLITVHGHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 69
RR+ H RG +L + AD GK + + + D+ L
Sbjct: 77 RRMDASH-------RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCL 129
Query: 70 RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 129
RYYAG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +
Sbjct: 130 RYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 130 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTF 309
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309
VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369
Query: 310 XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 429
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
+ TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK
Sbjct: 430 AVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 430 SVVTPI 435
+V +
Sbjct: 490 TVTVKV 495
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 410 bits (1055), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/426 (49%), Positives = 274/426 (64%), Gaps = 8/426 (1%)
Query: 11 RRLITVHGHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 69
RR+ H RG +L + AD GK + + + D+ L
Sbjct: 77 RRMDASH-------RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCL 129
Query: 70 RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 129
RYYAG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +
Sbjct: 130 RYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 130 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTF 309
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309
VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369
Query: 310 XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 429
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 429
+ TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK
Sbjct: 430 AVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 430 SVVTPI 435
+V +
Sbjct: 490 TVTVKV 495
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/416 (49%), Positives = 269/416 (64%), Gaps = 8/416 (1%)
Query: 11 RRLITVHGHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 69
RR+ H RG +L + AD GK + + + D+ L
Sbjct: 77 RRMDASH-------RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCL 129
Query: 70 RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 129
RYYAG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +
Sbjct: 130 RYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 130 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTF 309
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309
VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369
Query: 310 XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 429
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 425
+ TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y
Sbjct: 430 AVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/416 (49%), Positives = 268/416 (64%), Gaps = 8/416 (1%)
Query: 11 RRLITVHGHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 69
RR+ H RG +L + AD GK + + + D+ L
Sbjct: 77 RRMDASH-------RGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCL 129
Query: 70 RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 129
RYYAG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +
Sbjct: 130 RYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 130 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 189
++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 190 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 249
GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTF 309
Query: 250 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309
VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369
Query: 310 XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 369
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAA 429
Query: 370 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 425
+ TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y
Sbjct: 430 AVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/412 (48%), Positives = 268/412 (65%), Gaps = 1/412 (0%)
Query: 25 RGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 83
RG +L + AD GK + + + D+ LRYYAG ADK HG+
Sbjct: 83 RGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKT 142
Query: 84 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
+ + YT EP+GV G IIPWNFP M K+ PALA G +++K AEQTPL ALY
Sbjct: 143 IPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALY 202
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A+L K AG P GV+NV+PGFGPTAGAAIASH D+DKV+FTGST+VG + AA SNLK
Sbjct: 203 VANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLK 262
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
V+LE+GGKSP +I D D++ A + A + FN+G+ C A SR +VQE IY EF ++ V
Sbjct: 263 RVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSV 322
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEP 323
+AK+ VVG+PFD QGPQVD+ QF ++L YI+ GK EG LL +P
Sbjct: 323 ARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGYFIQP 382
Query: 324 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 383
T+F ++ + M IAK EIFGPVM ++KFK++EE + ANN++YGLAA + TKDL+ AN +S
Sbjct: 383 TVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLS 442
Query: 384 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435
++++AG +W+NCY F + P+GGYK+SG GR+ G L Y +VK+V +
Sbjct: 443 QALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVTVRV 494
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 334 bits (857), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 255/421 (60%), Gaps = 7/421 (1%)
Query: 18 GHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 76
G + RG +L + AD G +++ A + + T RY+AG
Sbjct: 93 GKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC 152
Query: 77 DKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 132
DKI G + +++A L +EP+GV G +IPWN+P M K + LAAG T+++K
Sbjct: 153 DKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 133 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
PA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 193 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
+M++ A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE C+A+ R++V+E
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 312
I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 313 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAG 370
+PT+FT+V + M IAK E FGP+M + +F V+ + AN T +GLA+G
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 371 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 430
+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+ YL++K+
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 431 V 431
V
Sbjct: 513 V 513
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 333 bits (854), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 255/421 (60%), Gaps = 7/421 (1%)
Query: 18 GHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 76
G + RG +L + AD G +++ A + + T RY+AG
Sbjct: 93 GKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC 152
Query: 77 DKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 132
DKI G + +++A L +EP+GV G +IPWN+P M K + LAAG T+++K
Sbjct: 153 DKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 133 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
PA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 193 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
+M++ A SN+K VSL+LGGKSPL+IF D D+N A M + + FNKGE C+A+ R++V+E
Sbjct: 273 IMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 312
I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 313 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAG 370
+PT+FT+V + M IAK E FGP+M + +F V+ + AN T +GLA+G
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 371 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 430
+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+ YL++K+
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 431 V 431
V
Sbjct: 513 V 513
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 332 bits (850), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 254/421 (60%), Gaps = 7/421 (1%)
Query: 18 GHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 76
G + RG +L + AD G +++ A + + T RY+AG
Sbjct: 93 GKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC 152
Query: 77 DKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 132
DKI G + +++A L +EP+GV G +IPWN+P M K + LAAG T+++K
Sbjct: 153 DKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 133 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
PA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 193 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
+M++ A SN+K VSL LGGKSPL+IF D D+N A M + + FNKGE C+A+ R++V+E
Sbjct: 273 IMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 312
I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 313 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAG 370
+PT+FT+V + M IAK E FGP+M + +F V+ + AN T +GLA+G
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 371 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 430
+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+ YL++K+
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 431 V 431
V
Sbjct: 513 V 513
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 330 bits (847), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 254/421 (60%), Gaps = 7/421 (1%)
Query: 18 GHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 76
G + RG +L + AD G +++ A + + T RY+AG
Sbjct: 93 GKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC 152
Query: 77 DKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 132
DKI G + +++A L +EP+GV G +IPWN+P M K + LAAG T+++K
Sbjct: 153 DKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 133 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
PA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 193 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
+M++ A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE +A+ R++V+E
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEE 332
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 312
I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 313 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAG 370
+PT+FT+V + M IAK E FGP+M + +F V+ + AN T +GLA+G
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 371 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 430
+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+ YL++K+
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 431 V 431
V
Sbjct: 513 V 513
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 330 bits (847), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 254/421 (60%), Gaps = 7/421 (1%)
Query: 18 GHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 76
G + RG +L + AD G +++ A + + T RY+AG
Sbjct: 93 GKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC 152
Query: 77 DKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 132
DKI G + +++A L +EP+GV G +IPWN+P M K + LAAG T+++K
Sbjct: 153 DKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 133 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
PA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 193 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
+M++ A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE +A+ R++V+E
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEE 332
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 312
I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 313 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAG 370
+PT+FT+V + M IAK E FGP+M + +F V+ + AN T +GLA+G
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 371 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 430
+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+ YL++K+
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 431 V 431
V
Sbjct: 513 V 513
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 327 bits (839), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 165/421 (39%), Positives = 253/421 (60%), Gaps = 7/421 (1%)
Query: 18 GHVFLEPRGIML-KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 76
G + RG +L + AD G +++ A + + T RY+AG
Sbjct: 93 GKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC 152
Query: 77 DKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 132
DKI G + +++A L +EP+GV G +IPWN+P M K + LAAG T+++K
Sbjct: 153 DKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 133 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
PA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272
Query: 193 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
+M++ A SN+K VSL LGGKSPL+IF D D+N A M + + FNKGE +A+ R++V+E
Sbjct: 273 IMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEE 332
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 312
I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 313 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAG 370
+PT+FT+V + M IAK E FGP+M + +F V+ + AN T +GLA+G
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 371 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 430
+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+ YL++K+
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512
Query: 431 V 431
V
Sbjct: 513 V 513
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 325 bits (834), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 234/387 (60%), Gaps = 9/387 (2%)
Query: 61 DIPGAANTLRYYAGAADKIHGE-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF 115
DI A+ Y+AG A+ + G+ L M R + + LR+P+GVVG I PWN+P M
Sbjct: 107 DIDDVASCFEYFAGQAEALDGKQKAPVTLPMER-FKSHVLRQPLGVVGLISPWNYPLLMA 165
Query: 116 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH 175
K++PALAAGCT ++KP+E + L F + G+P GVLN++ G GP AGA + SH
Sbjct: 166 TWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSH 225
Query: 176 MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235
D+DK++FTGS+ G +VM A+A +KPV+LELGGKSP+++F+DVD++ + + G
Sbjct: 226 PDVDKIAFTGSSATGSKVM-ASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCF 284
Query: 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 295
+ G+IC A+SR+ V E I EF KLV+ K + DPF+ R GP + K Q+D+I+
Sbjct: 285 WTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMK 344
Query: 296 YIEHGKREGATLLT--XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 353
+I K EGAT+L EPTI T+++ M I K E+FGPV+ + F +
Sbjct: 345 FISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSE 404
Query: 354 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGF 413
+EAI AN+T YGLAA + + DL +++++ G +W+NC P+GG K SGF
Sbjct: 405 DEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGF 464
Query: 414 GRDCGLESLHNYLQVKSVVTPIFNSPW 440
GR+ G + NYL +K V I + PW
Sbjct: 465 GRELGEWGIQNYLNIKQVTQDISDEPW 491
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 232/385 (60%), Gaps = 4/385 (1%)
Query: 59 MGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 117
M D+ G A A DK + + + + REPIGVVG I PWN+P M
Sbjct: 128 MDDVAGCFEYFADQAEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATW 187
Query: 118 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 177
K++PALAAGCT ++KP+E + L A + K G+P GVLN+V G GP AGA +++H D
Sbjct: 188 KIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPD 247
Query: 178 IDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 237
+DKV+FTGS + G+++M A+A +KPV+LELGGKSP+++FDDVD++ A + L G +
Sbjct: 248 VDKVAFTGSFETGKKIM-ASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWT 306
Query: 238 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 297
G+IC A+SR+ + I +F +++V AK V DP + R GP V + Q+++I +I
Sbjct: 307 NGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFI 366
Query: 298 EHGKREGATLLTXXXXXXXXXXX--XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE 355
+ K +GAT+LT EPTI T++T M I + E+FGPV+ + +F T +E
Sbjct: 367 SNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDE 426
Query: 356 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGR 415
AI+ AN+T+YGLA +++ D +S I AG IW+NC P+GG K SGFGR
Sbjct: 427 AIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGR 486
Query: 416 DCGLESLHNYLQVKSVVTPIFNSPW 440
+ G + NYL VK V I + PW
Sbjct: 487 ELGEGGIDNYLSVKQVTEYISDEPW 511
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/387 (44%), Positives = 237/387 (61%), Gaps = 9/387 (2%)
Query: 61 DIPGAANTLRYYAGAADKIHGE-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF 115
DI A YYA A+K+ L M + + LREPIGVVG I PWN+P M
Sbjct: 110 DIDDVAGCFEYYADLAEKLDARQKAPVSLPMD-TFKSHVLREPIGVVGLITPWNYPMLMA 168
Query: 116 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH 175
KV+PALAAGC I+KP+E L L + K G+P GVLN++ G GP AGA +A+H
Sbjct: 169 TWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATH 228
Query: 176 MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235
D+DKV+FTGS+ G ++M AAA +KPVSLELGGKSPL++F+DVD++ AA+ A+ G
Sbjct: 229 PDVDKVAFTGSSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF 287
Query: 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 295
+ G+IC A+SR+ + E I EF ++V+ K + DP + R GP V + Q+++IL
Sbjct: 288 WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILK 347
Query: 296 YIEHGKREGATLLTXXXXXXXXXXX--XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 353
++ + K EGAT+LT EPTI T+VT +M I + E+FGPV+ + F T
Sbjct: 348 FVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTE 407
Query: 354 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGF 413
EEAI AN+T YGL A +++ DL V+++ +AGI+W+NC + P+GG K SGF
Sbjct: 408 EEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGF 467
Query: 414 GRDCGLESLHNYLQVKSVVTPIFNSPW 440
GR+ G L NYL VK V I PW
Sbjct: 468 GRELGEWGLDNYLSVKQVTQYISEEPW 494
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 314 bits (805), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 231/385 (60%), Gaps = 4/385 (1%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF 110
GK + + DI A+ L YYAG I GE + + YT REP+GVV I WN+
Sbjct: 95 GKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNY 154
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170
P + K +PALAAG MI KP+E TPL AL A + AGVPDGV NV+ G G G
Sbjct: 155 PVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQ 214
Query: 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230
+ H I+K+SFTG T G++VM +A++S+LK V++ELGGKSPL+IF D D++ AAD+A
Sbjct: 215 WLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIA 274
Query: 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 290
++ F+ G++C +RV++ FE K++E+ + +GDP D GP V
Sbjct: 275 VMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHM 334
Query: 291 DRILSYIEHGKREGATLLTXXXXXXXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMA 346
+ +L YIE GK + A LL PT+FT+ +DM I + EIFGPVM+
Sbjct: 335 ESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMS 394
Query: 347 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG 406
++ + +EAI+ AN+T YGLAAG++T+DL A+ + AGI WIN + ++ P G
Sbjct: 395 ILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVG 454
Query: 407 GYKMSGFGRDCGLESLHNYLQVKSV 431
GYK SG GR+ GL +L +Y ++KSV
Sbjct: 455 GYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 314 bits (805), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 231/385 (60%), Gaps = 4/385 (1%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF 110
GK + + DI A+ L YYAG I GE + + YT REP+GVV I WN+
Sbjct: 94 GKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNY 153
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170
P + K +PALAAG MI KP+E TPL AL A + AGVPDGV NV+ G G G
Sbjct: 154 PVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQ 213
Query: 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230
+ H I+K+SFTG T G++VM +A++S+LK V++ELGGKSPL+IF D D++ AAD+A
Sbjct: 214 WLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIA 273
Query: 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 290
++ F+ G++C +RV++ FE K++E+ + +GDP D GP V
Sbjct: 274 VMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHM 333
Query: 291 DRILSYIEHGKREGATLLTXXXXXXXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMA 346
+ +L YIE GK + A LL PT+FT+ +DM I + EIFGPVM+
Sbjct: 334 ESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMS 393
Query: 347 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG 406
++ + +EAI+ AN+T YGLAAG++T+DL A+ + AGI WIN + ++ P G
Sbjct: 394 ILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVG 453
Query: 407 GYKMSGFGRDCGLESLHNYLQVKSV 431
GYK SG GR+ GL +L +Y ++KSV
Sbjct: 454 GYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 311 bits (798), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 230/385 (59%), Gaps = 4/385 (1%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF 110
GK + + DI A+ L YYAG I GE + + YT REP+GVV I WN+
Sbjct: 94 GKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNY 153
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170
P + K +PALAAG MI KP+E TPL AL A + AGVPDGV NV+ G G G
Sbjct: 154 PVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQ 213
Query: 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230
+ H I+K+SFTG T G++VM +A++S+LK V++ LGGKSPL+IF D D++ AAD+A
Sbjct: 214 WLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLIIFPDADLDRAADIA 273
Query: 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 290
++ F+ G++C +RV++ FE K++E+ + +GDP D GP V
Sbjct: 274 VMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHM 333
Query: 291 DRILSYIEHGKREGATLLTXXXXXXXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMA 346
+ +L YIE GK + A LL PT+FT+ +DM I + EIFGPVM+
Sbjct: 334 ESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMS 393
Query: 347 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG 406
++ + +EAI+ AN+T YGLAAG++T+DL A+ + AGI WIN + ++ P G
Sbjct: 394 ILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVG 453
Query: 407 GYKMSGFGRDCGLESLHNYLQVKSV 431
GYK SG GR+ GL +L +Y ++KSV
Sbjct: 454 GYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 310 bits (795), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 230/385 (59%), Gaps = 4/385 (1%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF 110
GK + + DI A+ L YYAG I GE + + YT REP+GVV I WN+
Sbjct: 95 GKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNY 154
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170
P + K +PALAAG MI KP+E TPL AL A + AGVPDGV NV+ G G G
Sbjct: 155 PVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQ 214
Query: 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230
+ H I+K+SFTG T G++VM +A++S+LK V++ELGGKSPL+IF D D++ AAD+A
Sbjct: 215 WLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIA 274
Query: 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 290
++ F+ G++ +RV++ FE K++E+ + +GDP D GP V
Sbjct: 275 VMANFFSSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHM 334
Query: 291 DRILSYIEHGKREGATLLTXXXXXXXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMA 346
+ +L YIE GK + A LL PT+FT+ +DM I + EIFGPVM+
Sbjct: 335 ESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMS 394
Query: 347 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG 406
++ + +EAI+ AN+T YGLAAG++T+DL A+ + AGI WIN + ++ P G
Sbjct: 395 ILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVG 454
Query: 407 GYKMSGFGRDCGLESLHNYLQVKSV 431
GYK SG GR+ GL +L +Y ++KSV
Sbjct: 455 GYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 310 bits (793), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 230/385 (59%), Gaps = 4/385 (1%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF 110
GK + + DI A+ L YYAG I GE + + YT REP+GVV I WN+
Sbjct: 95 GKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNY 154
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA 170
P + K +PALAAG MI KP+E TPL AL A + AGVPDGV NV+ G G G
Sbjct: 155 PVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQ 214
Query: 171 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230
+ H I+K+SFTG T G++VM +A++S+LK V++ELGGKSPL+IF D D++ AAD+A
Sbjct: 215 WLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIA 274
Query: 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 290
++ F+ G++ +RV++ FE K++E+ + +GDP D GP V
Sbjct: 275 VMANFFSSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHM 334
Query: 291 DRILSYIEHGKREGATLLTXXXXXXXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMA 346
+ +L YIE GK + A LL PT+FT+ +DM I + EIFGPVM+
Sbjct: 335 ESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMS 394
Query: 347 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG 406
++ + +EAI+ AN+T YGLAAG++T+DL A+ + AGI WIN + ++ P G
Sbjct: 395 ILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVG 454
Query: 407 GYKMSGFGRDCGLESLHNYLQVKSV 431
GYK SG GR+ GL +L +Y ++KSV
Sbjct: 455 GYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 308 bits (788), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 234/389 (60%), Gaps = 9/389 (2%)
Query: 59 MGDIPGAANTLRYYAGAADKIHGE-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTT 113
+ D+ YYAG A+++ + L M + Y L+EPIGVV I PWN+P
Sbjct: 108 LADLDDVVACFEYYAGLAEELDSKQKAPISLPMD-TFKSYILKEPIGVVALITPWNYPFL 166
Query: 114 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA 173
M K++PALAAGC I+KP+E + L + K G+P GVLN+V G G AGA++A
Sbjct: 167 MATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLA 226
Query: 174 SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233
SH D+DK+SFTGS+ G ++M AA +KPVSLELGGKSP+++F+DVD++ A+ + G
Sbjct: 227 SHPDVDKISFTGSSATGSKIMTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFG 285
Query: 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 293
F G+IC A+SR+ V E I EF KLV+ A+ + DP + R GP V + Q+ ++
Sbjct: 286 CFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKV 345
Query: 294 LSYIEHGKREGATLLT--XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 351
L+ I K EGAT+LT EPTI T+VT M I + E+FGPV+A+ F
Sbjct: 346 LNCISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFS 405
Query: 352 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMS 411
T EEAI AN+T YGL + +M+ DL +S++++AGI+WINC P+GG K S
Sbjct: 406 TEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRS 465
Query: 412 GFGRDCGLESLHNYLQVKSVVTPIFNSPW 440
GFGR+ G L NYL VK V + PW
Sbjct: 466 GFGRELGEWGLENYLSVKQVTRYTSDEPW 494
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 233/386 (60%), Gaps = 11/386 (2%)
Query: 54 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLK----MSRALQGYTLREPIGVVGHIIPWN 109
S A M D+ G YYAG A+ + + S + + Y LREP+GVVG I PWN
Sbjct: 119 ESAADMDDVAGC---FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWN 175
Query: 110 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
+P M KV+PALAAGC I+KP+E + L + + G+P G LN++ G GP AG
Sbjct: 176 YPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAG 235
Query: 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVD-VNTAAD 228
+ASH +DK+SFTGS G ++M AAA +KPVSLELGGKSP+++FDD+D ++ AA+
Sbjct: 236 GPLASHPHVDKISFTGSGPTGSKIMTAAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAE 294
Query: 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKK 288
L GI N G++C A+SR+ VQE I F +L++ K + DP + + GP V
Sbjct: 295 WTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAG 354
Query: 289 QFDRILSYIEHGKREGATLLT--XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMA 346
Q++++L +I + K EGAT+L +PTI T+V M I K E+FGPV+
Sbjct: 355 QYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLC 414
Query: 347 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG 406
+ FKT E+AI+ AN+T+YGL A +M+KD+ +++ + GIIWINC ++ P+G
Sbjct: 415 VKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWG 474
Query: 407 GYKMSGFGRDCGLESLHNYLQVKSVV 432
G K SGFGRD G L N+L +K V
Sbjct: 475 GKKRSGFGRDLGKWGLENFLNIKQVT 500
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 297 bits (760), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 164/386 (42%), Positives = 232/386 (60%), Gaps = 11/386 (2%)
Query: 54 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLK----MSRALQGYTLREPIGVVGHIIPWN 109
S A M D+ G YYAG A+ + + S + + Y LREP+GVVG I PWN
Sbjct: 119 ESAADMDDVAGC---FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWN 175
Query: 110 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
+P M KV+PALAAGC I+KP+E + L + + G+P G LN++ G GP AG
Sbjct: 176 YPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAG 235
Query: 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVD-VNTAAD 228
+ASH +DK+SFTGS G ++M AAA +KPVSL LGGKSP+++FDD+D ++ AA+
Sbjct: 236 GPLASHPHVDKISFTGSGPTGSKIMTAAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAE 294
Query: 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKK 288
L GI N G++C A+SR+ VQE I F +L++ K + DP + + GP V
Sbjct: 295 WTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAG 354
Query: 289 QFDRILSYIEHGKREGATLLT--XXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMA 346
Q++++L +I + K EGAT+L +PTI T+V M I K E+FGPV+
Sbjct: 355 QYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLC 414
Query: 347 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG 406
+ FKT E+AI+ AN+T+YGL A +M+KD+ +++ + GIIWINC ++ P+G
Sbjct: 415 VKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWG 474
Query: 407 GYKMSGFGRDCGLESLHNYLQVKSVV 432
G K SGFGRD G L N+L +K V
Sbjct: 475 GKKRSGFGRDLGKWGLENFLNIKQVT 500
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 288 bits (737), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 225/385 (58%), Gaps = 9/385 (2%)
Query: 54 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPT 112
S+A M DI N Y+AG ADK GE++ + ++EP+GVV I PWN+P
Sbjct: 128 ESYADMDDI---HNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPL 184
Query: 113 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 172
K++PALA GC++++KP+E TPL + L + G P G +N++ G G G +
Sbjct: 185 LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVM 244
Query: 173 ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232
+ H ++D VSFTG + G+ +M+ AA +N+ ++LELGGK+P +IFDD D A D AL
Sbjct: 245 SGHKEVDLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALN 303
Query: 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 292
G F+ G++C A SR+ VQ I D+FE+ L+++ K +G+ FD GP + + ++
Sbjct: 304 GGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNK 363
Query: 293 ILSYIEHGKREGATLLTXXXXXXXXXXXX----EPTIFTNVTEDMLIAKNEIFGPVMALM 348
I SY++ K EGAT+ EPT+ TN M I + E+FGPV+ +
Sbjct: 364 IESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE 423
Query: 349 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 408
F+T +EAI+ AN++ YGLA + +KD+ A V+ ++ G +WIN + + + P+GGY
Sbjct: 424 GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGY 483
Query: 409 KMSGFGRDCGLESLHNYLQVKSVVT 433
K SG GR+ G E L YL K ++T
Sbjct: 484 KQSGIGRELGKEGLEEYLVSKHILT 508
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 288 bits (736), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/378 (39%), Positives = 226/378 (59%), Gaps = 8/378 (2%)
Query: 61 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 120
DI A + YYAG A + G+ +++ YT REP+GV I+ WN+P + K +
Sbjct: 118 DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177
Query: 121 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 180
PALA G ++ KP+ TP+ + A + AGVP G++NVV G G G+ + H ++ K
Sbjct: 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAK 236
Query: 181 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 240
VSFTGS G++VM+ +A + +K V+LELGGKSPLLIF D ++ A AL+ +G+
Sbjct: 237 VSFTGSVPTGKKVMEMSAKT-VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQ 295
Query: 241 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 300
+C +RV+VQ I +F +++V++ KA VVGDP R G + K Q D++L ++
Sbjct: 296 VCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQA 355
Query: 301 KREGATLL------TXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 354
K+EGA +L T P + N +DM K EIFGPVM+++ F T E
Sbjct: 356 KKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEE 415
Query: 355 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG 414
E ++ ANNT +GLA+G+ T+D++ A+ V+ ++ AG +IN Y + P+GGYKMSGFG
Sbjct: 416 EVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFG 475
Query: 415 RDCGLESLHNYLQVKSVV 432
R+ G ++ Y Q+K+V+
Sbjct: 476 RENGQATVDYYSQLKTVI 493
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 281 bits (720), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/377 (40%), Positives = 223/377 (59%), Gaps = 7/377 (1%)
Query: 59 MGDIPGAANTLRYYAG-AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 117
+ D A+ ++ G A ++G+ + + YT R P+GV I WN+P +
Sbjct: 111 VADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACW 169
Query: 118 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 177
K +PAL AG M+ KP+E TPL AL A + AG+P G+ NV+ G T G + +H D
Sbjct: 170 KAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPD 228
Query: 178 IDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 237
+ KVS TGS GR+V AAA +LK V++ELGGKSP+++FDD D+ +A A+LG ++
Sbjct: 229 VAKVSLTGSVPTGRKVA-AAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYS 287
Query: 238 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 297
G++C +RV+VQ+ F + L + +A ++GDP D A GP V K Q +++LSYI
Sbjct: 288 SGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYI 347
Query: 298 EHGKREGATLLTXX---XXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 354
E GK EGATL+T +PT+F +VT+DM IA+ EIFGPVM ++ F +
Sbjct: 348 EKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDED 407
Query: 355 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG 414
E + AN T +GLA G+ T DL A+ V + AG +WIN Y + P+GG K SGFG
Sbjct: 408 EVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFG 467
Query: 415 RDCGLESLHNYLQVKSV 431
R+ +L +Y ++K+V
Sbjct: 468 RENSAAALEHYSELKTV 484
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 219/374 (58%), Gaps = 5/374 (1%)
Query: 64 GAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 123
G+ + Y+AGAADK+ + Q REP+GVVG I+ WN P + K++PAL
Sbjct: 112 GSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPAL 171
Query: 124 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 183
AGCT+++KPA +TPL A A + G+P+GVL+VVPG G G A+ S+ DID +F
Sbjct: 172 LAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTF 230
Query: 184 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 243
TGS+ VGR+V + AA LKP +LELGGKS +I +DVD+ A M + + N G+ CV
Sbjct: 231 TGSSAVGREVGRRAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCV 289
Query: 244 ASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE 303
+R+ YDE + A VG P DPA + GP + +KQ R+ YI G E
Sbjct: 290 NQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEE 349
Query: 304 GATLLTXXXXXXXXXXX--XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSAN 361
GA L+ +PT+F +V M IA+ EIFGPV+A++ + T E+AI AN
Sbjct: 350 GARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIAN 409
Query: 362 NTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 421
++ YGLA + T D+ +S+ IR G IN ++AFD P+GGYK SG GR+ G E
Sbjct: 410 DSVYGLAGSVWTTDVPKGIKISQQIRTGTYGIN-WYAFDPGSPFGGYKNSGIGRENGPEG 468
Query: 422 LHNYLQVKSVVTPI 435
+ ++ Q KSV+ P+
Sbjct: 469 VEHFTQQKSVLLPM 482
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 219/380 (57%), Gaps = 3/380 (0%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGY-TLREPIGVVGHIIPWN 109
GK + AK G+I AA+ + ++A +I+G+ + +A + +++PIGV I PWN
Sbjct: 98 GKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWN 156
Query: 110 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
FP M K PALAAGCTM++KPA QTP AL A LA AGVP GV NVV G G
Sbjct: 157 FPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVG 216
Query: 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229
+ S+ + K+SFTGST++GRQ+M+ A ++K VSLELGG +P ++FDD D++ A +
Sbjct: 217 NELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEG 275
Query: 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQ 289
AL N G+ CV ++R+YVQ+G+YD F +KL + +GD D V GP +D+K
Sbjct: 276 ALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKA 335
Query: 290 FDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 349
++ +I +GA ++ +PTI +V + ++K E FGP+ L +
Sbjct: 336 VAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFR 395
Query: 350 FKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYK 409
FK + I AN+T +GLAA +DL+ V ++ GI+ IN + P+GG K
Sbjct: 396 FKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIK 455
Query: 410 MSGFGRDCGLESLHNYLQVK 429
SG GR+ + +YL++K
Sbjct: 456 ASGLGREGSKYGIEDYLEIK 475
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 219/380 (57%), Gaps = 3/380 (0%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGY-TLREPIGVVGHIIPWN 109
GK + AK G+I AA+ + ++A +I+G+ + +A + +++PIGV I PWN
Sbjct: 98 GKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWN 156
Query: 110 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
FP M K PALAAGCTM++KPA QTP AL A LA AGVP GV NVV G G
Sbjct: 157 FPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVG 216
Query: 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229
+ S+ + K+SFTGST++GRQ+M+ A ++K VSLELGG +P ++FDD D++ A +
Sbjct: 217 NELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEG 275
Query: 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQ 289
AL N G+ CV ++R+YVQ+G+YD F +KL + +GD D V GP +D+K
Sbjct: 276 ALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKA 335
Query: 290 FDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 349
++ +I +GA ++ +PTI +V + ++K E FGP+ L +
Sbjct: 336 VAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFR 395
Query: 350 FKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYK 409
FK + I AN+T +GLAA +DL+ V ++ GI+ IN + P+GG K
Sbjct: 396 FKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIK 455
Query: 410 MSGFGRDCGLESLHNYLQVK 429
SG GR+ + +YL++K
Sbjct: 456 ASGLGREGSKYGIEDYLEIK 475
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 270 bits (691), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 237/412 (57%), Gaps = 5/412 (1%)
Query: 23 EPRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E GI+ K+ D GK + A+ G++ AA+ + ++A A +++G+
Sbjct: 93 ERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGD 151
Query: 83 VLKMSRALQGYT-LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 141
+ + Q T +R+P+GV I PWNFP M K +PALAAGCTMIV+PA+ TPL A
Sbjct: 152 TIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTA 211
Query: 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 201
L LA+ AG+P GVL +V G GA + S+ + K+SFTGST+VGR +M A +
Sbjct: 212 LALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT- 270
Query: 202 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 261
+K +SLELGG +P ++FDD D++ A D A++ N G+ CV ++R+YVQ G+YD+F +K
Sbjct: 271 IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEK 330
Query: 262 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXX 321
L K K VG+ +P V GP +++K ++ ++IE +GA L+T
Sbjct: 331 LAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLIT--GGKELGGLFF 388
Query: 322 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 381
EP I T VT DML+AK E FGP+ L F T EE I AN+T +GLAA T++ + A
Sbjct: 389 EPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIR 448
Query: 382 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433
VS ++ G++ N + P+GG K SG GR+ + YL+ K + +
Sbjct: 449 VSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICS 500
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 268 bits (686), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/380 (39%), Positives = 218/380 (57%), Gaps = 11/380 (2%)
Query: 65 AANTLRYYAGAADK-IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 123
AA +YA A+ + + R YT+R P G VG I PWN P + +++PAL
Sbjct: 128 AAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPAL 187
Query: 124 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 183
A G T+++KPAE +P A A + K A +P GV N+V GFG AGAA+ +H + ++
Sbjct: 188 AFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTL 247
Query: 184 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 243
TG T+ G+ VM+ AA +LK +S ELGGKSP L+F D D+ A D + I GE C
Sbjct: 248 TGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCT 306
Query: 244 ASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE 303
ASSR+ V+E I+++F K+VE+A+A VG P DP GP + + R+L Y+E GKRE
Sbjct: 307 ASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKRE 366
Query: 304 GATLLTXXXXXXXXXXXXE--------PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE 355
GA LL + PT+F M IA+ EIFGPV+ + FK EE
Sbjct: 367 GARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEE 425
Query: 356 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGR 415
A++ AN+T+YGLAA + T+DL A+ ++ + AG++++N + P+GG K SG R
Sbjct: 426 ALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRR 485
Query: 416 DCGLESLHNYLQVKSVVTPI 435
+ G +L Y +K++ P+
Sbjct: 486 EGGTYALDFYTDLKTIALPL 505
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 258 bits (658), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 217/385 (56%), Gaps = 4/385 (1%)
Query: 60 GDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 118
G+I A+ Y AG A + G+ + G LREP+GVVG I PWNFP + +
Sbjct: 122 GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASER 181
Query: 119 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 178
V A+ +GCT+++KP+E T ++ A LA+ AG+PDGV NVV G+G AG +A ++
Sbjct: 182 VPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNV 241
Query: 179 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 238
D V+FTGS VG ++ + AA + +K V LELGGK P ++F D D++ AAD G+ N
Sbjct: 242 DXVAFTGSVRVGTKLGEIAART-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNA 300
Query: 239 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 298
G+ C++ SR+ VQEGI D ++L++ ++ GDP + + G + + +++ SY+
Sbjct: 301 GQCCISGSRLLVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVT 360
Query: 299 HGKREGATLLTXXXXXXXXXXX-XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI 357
G GA LL PT+F VT D IA+ EIFGPV++ + FKT +EA+
Sbjct: 361 AGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAV 420
Query: 358 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDC 417
AN T +GL+A + + +L A R IRAG WIN + P GGYK SG GR+
Sbjct: 421 ALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGREL 480
Query: 418 GLESLHNYLQVKSV-VTPIFNSPWL 441
G Y Q K V VT +PW
Sbjct: 481 GRYGFDEYSQFKGVHVTLGRPAPWF 505
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 204/366 (55%), Gaps = 6/366 (1%)
Query: 69 LRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 128
L ++ A D + + R ++E IGV G I PWNFPT +K++ A AAG
Sbjct: 111 LNHFVAARDALDNYEFEERRG-DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSP 169
Query: 129 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 188
+++KP+E+TP A+ A + GVP GV N+V G G G ++ H + SFTGS
Sbjct: 170 VVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGP 229
Query: 189 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 248
G ++ + AA + K VSLELGGKSP ++ DDVD+ AA ++ N G++C A +RV
Sbjct: 230 TGSKIXEKAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRV 288
Query: 249 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308
V I D F +L E+ VG+P + + GP + KKQFD++ +YI G EGA L
Sbjct: 289 LVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELF 348
Query: 309 ---TXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY 365
PTIF NV IA+ EIFGPV +++ + ++EAI+ AN+T+Y
Sbjct: 349 YGGPGKPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKY 408
Query: 366 GLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 425
GLA ++ KD + V+RSI AG + IN D P+GGYK SG GR+ G + +
Sbjct: 409 GLAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPDLPFGGYKQSGLGREWGDYGIEEF 467
Query: 426 LQVKSV 431
L+VKS+
Sbjct: 468 LEVKSI 473
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 254 bits (650), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 211/371 (56%), Gaps = 2/371 (0%)
Query: 60 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMK 118
G+I AA+ + ++A ++ G+ L A + ++EPIGV I PWNFP M K
Sbjct: 109 GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168
Query: 119 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 178
V PALAAGC ++VKPAE TP AL A LA+ AGVP GVL+VV G G I S+ +
Sbjct: 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIV 228
Query: 179 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 238
K+SFTGST VGR +M +A + +K ++LELGG +P ++FDD D++ A + A+ N
Sbjct: 229 RKLSFTGSTAVGRLLMAQSAPT-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNN 287
Query: 239 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 298
G+ CV ++R +V E +YD F KL VG + GP +++ ++ S+I
Sbjct: 288 GQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIA 347
Query: 299 HGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 358
+GA+L+T EPT+ T V DM +AK E FGP+ L +F + EE ++
Sbjct: 348 DALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407
Query: 359 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCG 418
AN+T +GLAA + ++D+ V+ ++ G++ IN + P+GG K SG GR+
Sbjct: 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGS 467
Query: 419 LESLHNYLQVK 429
+ +Y+ +K
Sbjct: 468 HYGIDDYVVIK 478
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 218/410 (53%), Gaps = 10/410 (2%)
Query: 28 MLKFADXXXXXXXXXXXXXXXXXGK-LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 86
+LK AD GK LHS A +IP + R++AGAA ++G L
Sbjct: 88 LLKLADVIEENGQVFAELESRNCGKPLHS-AFNDEIPAIVDVFRFFAGAARCLNG--LAA 144
Query: 87 SRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 143
L+G+T R+P+GVV I PWN+P M K++PALAAG +++KP+E TPL AL
Sbjct: 145 GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204
Query: 144 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 203
A LAK P GV+N++ G G T G + H + VS TGS G ++ A+S +K
Sbjct: 205 LAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASS-IK 262
Query: 204 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 263
+ELGGK+P+++FDD D+ + +N G+ C A+ R+Y Q+GIYD +KL
Sbjct: 263 RTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLG 322
Query: 264 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXE 322
G P D + GP +R+ +E K G ++T
Sbjct: 323 AAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYA 382
Query: 323 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
PT+ +D I + E+FGPV+++ F E+ + AN+++YGLA+ + TKD+ A+ V
Sbjct: 383 PTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRV 442
Query: 383 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
S ++ G W+N +F S+ P+GG K+SG+G+D L L +Y V+ V+
Sbjct: 443 SARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 213/381 (55%), Gaps = 12/381 (3%)
Query: 60 GDIPGAANTLRYYAGAADKIHGEVL----KMSRALQGYTLREPIGVVGHIIPWNFPTTMF 115
G+I +A L +++ A +++G+++ K RAL L++PIGV I PWNFP+ M
Sbjct: 107 GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRAL---VLKQPIGVAAVITPWNFPSAMI 163
Query: 116 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAI 172
KV ALAAGCT++VKPAE TP AL A LA AG+P GV NV+P A G AI
Sbjct: 164 TRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAI 223
Query: 173 ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232
+ + K+SFTGST G+ ++ AA S +K VS+ELGG +P ++FD +V+ A A+
Sbjct: 224 CTDPLVSKISFTGSTTTGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMA 282
Query: 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV-VGDPFDPAVRQGPQVDKKQFD 291
N G+ CV S++ VQ GI+D F K E K + VG+ F+ QGP +++K +
Sbjct: 283 SKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVE 342
Query: 292 RILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 351
++ + +GAT++T EPT+ NVT+DML E FGP+ ++KF
Sbjct: 343 KVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402
Query: 352 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMS 411
T EEAI AN GLA ++D V+ + G++ +N +CP+GG K S
Sbjct: 403 TEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQS 462
Query: 412 GFGRDCGLESLHNYLQVKSVV 432
G GR+ + YL++K V
Sbjct: 463 GLGREGSKYGIDEYLELKYVC 483
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 237 bits (605), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 145/381 (38%), Positives = 212/381 (55%), Gaps = 12/381 (3%)
Query: 60 GDIPGAANTLRYYAGAADKIHGEVL----KMSRALQGYTLREPIGVVGHIIPWNFPTTMF 115
G+I +A L +++ A +++G+++ K RAL L++PIGV I PWNFP+ M
Sbjct: 107 GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRAL---VLKQPIGVAAVITPWNFPSAMI 163
Query: 116 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAI 172
KV ALAAGCT++VKPAE TP AL A LA AG+P GV NV+P A G AI
Sbjct: 164 TRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAI 223
Query: 173 ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232
+ + K+SFTGST G+ ++ AA S +K VS+ELGG +P ++FD +V+ A A+
Sbjct: 224 CTDPLVSKISFTGSTTTGKILLHHAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMA 282
Query: 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV-VGDPFDPAVRQGPQVDKKQFD 291
N G+ V S++ VQ GI+D F K E K + VG+ F+ QGP +++K +
Sbjct: 283 SKFRNTGQTAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVE 342
Query: 292 RILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 351
++ + +GAT++T EPT+ NVT+DML E FGP+ ++KF
Sbjct: 343 KVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402
Query: 352 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMS 411
T EEAI AN GLA ++D V+ + G++ +N +CP+GG K S
Sbjct: 403 TEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQS 462
Query: 412 GFGRDCGLESLHNYLQVKSVV 432
G GR+ + YL++K V
Sbjct: 463 GLGREGSKYGIDEYLELKYVC 483
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 218/414 (52%), Gaps = 10/414 (2%)
Query: 23 EPRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 82
E +LK AD GK + K ++P + R++AGA +H
Sbjct: 85 ERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP 144
Query: 83 VLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 139
L G+T R+PIG+VG I PWN+P K++PA+ G T++ KP+EQTPL
Sbjct: 145 A--AGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPL 202
Query: 140 IALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 198
AL A L +A + P+GV+NV+ G G T G A+ +H + VS TG G++V+ AAA
Sbjct: 203 TALKLARL--IADILPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAAA 260
Query: 199 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 258
+ +K LELGGK+P++++ D D+ + +N G+ C A+ R+Y + GIY++
Sbjct: 261 KT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKL 319
Query: 259 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG-KREGATLLTXXXXXXXX 317
L D GP + ++Q DR+ S++E ++ + T
Sbjct: 320 VADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDE 379
Query: 318 XXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 377
+PT+ T++ I + E+FGPV+++ +F ++A+ AN++ YGLA+ + TKD++
Sbjct: 380 GFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDIS 439
Query: 378 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
A + ++ G WIN +F ++ P+GG K SG+G+D + +L +Y V+ +
Sbjct: 440 KAXRAASRLQYGCTWINTHFXLTNEXPHGGIKQSGYGKDXSVYALEDYTAVRHI 493
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 205/386 (53%), Gaps = 7/386 (1%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQG-YTLREPIGVVGHIIPWN 109
GKL S A+M ++ A + Y A I G++L + Y + P GVV I WN
Sbjct: 101 GKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWN 159
Query: 110 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
FP + K+ PAL G TM++KP ++TPL +AK AG+PDGVLNV+ G G G
Sbjct: 160 FPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVG 219
Query: 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229
+ ++ TGST G+Q+ + +A + PV LELGGK+P+++ DD D++ AA+
Sbjct: 220 QTLCESPITKMITMTGSTVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAED 278
Query: 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQ 289
AL G N G++C R+YV +YDEF K + K VGDP D + GP+ ++++
Sbjct: 279 ALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQRE 338
Query: 290 FDRILSYIEHGKREGATLLTXXXXXXXXXXX----XEPTIFTNVTEDMLIAKNEIFGPVM 345
D I + ++GAT+ T EPT+ +V +D ++ E FGP++
Sbjct: 339 IDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPIL 398
Query: 346 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPY 405
++K ++E+AI+ N++ YGL+A + T+ N + G ++IN +
Sbjct: 399 PIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFH 458
Query: 406 GGYKMSGFGRDCGLESLHNYLQVKSV 431
G+K SGFG + G L YL+ K+V
Sbjct: 459 NGWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 193/338 (57%), Gaps = 6/338 (1%)
Query: 97 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156
+ IGVVG I PWN+P +KV PAL AGCTM++KP+E PL A+ FA + A +P G
Sbjct: 160 DAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSG 219
Query: 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 216
V N++ G G G+ +++H D++ +SFTGST G+ + + A+ + LK V LELGGK +
Sbjct: 220 VFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNT-LKRVCLELGGKGANI 278
Query: 217 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 276
IF D D++ A + +N G+ C A +R+ V++ IYD+ K + A+ VG
Sbjct: 279 IFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQ 337
Query: 277 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX---XXXXXXXXXEPTIFTNVTEDM 333
GP V K+Q+D+I I+ G EGATL+T PT+F +V M
Sbjct: 338 TGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHM 397
Query: 334 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393
I + EIFGPV++L+ F T +EA+ AN+T YGL I ++D + ++ +R+G++ +
Sbjct: 398 RIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEV 457
Query: 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
N + +GG K SG R+ GL + +L K++
Sbjct: 458 NGH-ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 206/383 (53%), Gaps = 4/383 (1%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWN 109
GK+ A++ ++ A+ + Y A A + GE+++ R + L + +GV I+PWN
Sbjct: 95 GKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWN 153
Query: 110 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
FP + K++PAL G T+++KP+E TP A+ FA + G+P GV N+V G G T G
Sbjct: 154 FPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVG 213
Query: 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229
+A + + VS TGS G ++M A A N+ V LELGGK+P ++ DD D+ A
Sbjct: 214 QELAGNPKVAMVSMTGSVSAGEKIM-ATAAKNITKVCLELGGKAPAIVMDDADLELAVKA 272
Query: 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA-VRQGPQVDKK 288
+ + N G++C + RVYVQ+GIYD+F +L E +A G+P + + GP ++
Sbjct: 273 IVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAA 332
Query: 289 QFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALM 348
+R+ + EGA + PT+ +V ++M I E FGPV+ ++
Sbjct: 333 ALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVV 392
Query: 349 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 408
F T+EEAI AN++ YGL + I T++LNVA + ++ G +IN + G+
Sbjct: 393 AFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGW 452
Query: 409 KMSGFGRDCGLESLHNYLQVKSV 431
+ SG G G LH YLQ + V
Sbjct: 453 RKSGIGGADGKHGLHEYLQTQVV 475
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 224 bits (570), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 206/383 (53%), Gaps = 4/383 (1%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWN 109
GK+ A++ ++ A+ + Y A A + GE+++ R + L + +GV I+PWN
Sbjct: 95 GKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWN 153
Query: 110 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
FP + K++PAL G T+++KP+E TP A+ FA + G+P GV N+V G G T G
Sbjct: 154 FPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVG 213
Query: 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229
+A + + VS TGS G ++M A A N+ V LELGGK+P ++ DD D+ A
Sbjct: 214 QELAGNPKVAMVSMTGSVSAGEKIM-ATAAKNITKVXLELGGKAPAIVMDDADLELAVKA 272
Query: 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA-VRQGPQVDKK 288
+ + N G++C + RVYVQ+GIYD+F +L E +A G+P + + GP ++
Sbjct: 273 IVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAA 332
Query: 289 QFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALM 348
+R+ + EGA + PT+ +V ++M I E FGPV+ ++
Sbjct: 333 ALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVV 392
Query: 349 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 408
F T+E+AI AN++ YGL + I T++LNVA + ++ G +IN + G+
Sbjct: 393 AFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGW 452
Query: 409 KMSGFGRDCGLESLHNYLQVKSV 431
+ SG G G LH YLQ + V
Sbjct: 453 RKSGIGGADGKHGLHEYLQTQVV 475
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 206/383 (53%), Gaps = 4/383 (1%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWN 109
GK+ A++ ++ A+ + Y A A + GE+++ R + L + +GV I+PWN
Sbjct: 95 GKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWN 153
Query: 110 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
FP + K++PAL G T+++KP+E TP A+ FA + G+P GV N+V G G T G
Sbjct: 154 FPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVG 213
Query: 170 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229
+A + + VS TGS G ++M A A N+ V LELGGK+P ++ DD D+ A
Sbjct: 214 QELAGNPKVAMVSMTGSVSAGEKIM-ATAAKNITKVCLELGGKAPAIVMDDADLELAVKA 272
Query: 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA-VRQGPQVDKK 288
+ + N G++C + RVYVQ+GIYD+F +L E +A G+P + + GP ++
Sbjct: 273 IVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAA 332
Query: 289 QFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALM 348
+R+ + EGA + PT+ +V ++M I E FGPV+ ++
Sbjct: 333 ALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVV 392
Query: 349 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 408
F T+E+AI AN++ YGL + I T++LNVA + ++ G +IN + G+
Sbjct: 393 AFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGW 452
Query: 409 KMSGFGRDCGLESLHNYLQVKSV 431
+ SG G G LH YLQ + V
Sbjct: 453 RKSGIGGADGKHGLHEYLQTQVV 475
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 199/380 (52%), Gaps = 10/380 (2%)
Query: 61 DIPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 119
D A + L YYA +++ +SR Q P+GV I PWNF +
Sbjct: 134 DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTA 193
Query: 120 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 179
+ G T+++KPA TP++A F + + AG+P GV+N VPG G G + H
Sbjct: 194 VAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTS 253
Query: 180 KVSFTGSTDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234
++FTGS DVG ++ + AA ++LK V +E+GGK +++ D D++ AA+ L+
Sbjct: 254 LITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSA 313
Query: 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 294
G+ C A SR + + +YDE +K V AK VGDP + GP +D+K F++I+
Sbjct: 314 FGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIM 373
Query: 295 SYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 354
SYIE GK+EG L+T +PTI ++ + +I + EIFGPV+A K +
Sbjct: 374 SYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFD 432
Query: 355 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI--NCYFAFDSDCPYGGYKMSG 412
A++ ANNT YGL ++T++ R G ++ NC A P+GG+KMSG
Sbjct: 433 HALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSG 492
Query: 413 F-GRDCGLESLHNYLQVKSV 431
+ G + L ++Q K+V
Sbjct: 493 TDSKAGGPDYLALHMQAKTV 512
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 195/380 (51%), Gaps = 10/380 (2%)
Query: 61 DIPGAANTLRYYAGAADKI-HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 119
D A + + YYA ++ G+ + + + P GV I PWNF +
Sbjct: 134 DTAEAIDFMEYYARQMIELAKGKPVNSREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTT 193
Query: 120 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 179
+ G T+++KPA P+IA F + + +G+P GV+N VPG G G + H
Sbjct: 194 VAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTS 253
Query: 180 KVSFTGSTDVGRQVMQAAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234
++FTGS +VG ++ + AA ++LK V E+GGK +++ +D D+ AA
Sbjct: 254 IITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSA 313
Query: 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 294
G+ C A SR V E +YDE K+++E ++ VG+P V GP +D+ F++I+
Sbjct: 314 FGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIM 373
Query: 295 SYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 354
YIE GK EG L++ EPTIF ++ + + EIFGPV+A K + +
Sbjct: 374 DYIEIGKEEG-RLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFD 432
Query: 355 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI--NCYFAFDSDCPYGGYKMSG 412
EA++ ANNT YGL ++TK+ + N + G ++ NC A P+GG+KMSG
Sbjct: 433 EALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSG 492
Query: 413 F-GRDCGLESLHNYLQVKSV 431
+ G + L ++Q K++
Sbjct: 493 TDSKAGGPDYLALHMQAKTI 512
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 186/335 (55%), Gaps = 2/335 (0%)
Query: 98 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 157
P+GV G I+PWNFP K+S ALAAGC ++KPA +TPL + F + +PDG
Sbjct: 147 PVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXIAFFSVXDKLDLPDGX 206
Query: 158 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 217
+N+V G G + H D+ +SFTGST+VGR+++ A +K ++LELGG +P ++
Sbjct: 207 VNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTA-EQVKKLALELGGNAPFIV 265
Query: 218 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 277
FDD D+ AAD + G+ CV ++R++V E + D F +KL E+ VGD +
Sbjct: 266 FDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKXTVGDGXND 325
Query: 278 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX-XEPTIFTNVTEDMLIA 336
+ GP ++K+ FD++ +++ +GA+L+ PT+ V +
Sbjct: 326 GIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREXCCY 385
Query: 337 KNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 396
+ E FGP++ F+T EE I + N+T +GLA+ + T D A V+ +R G + N
Sbjct: 386 QEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTG 445
Query: 397 FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
+ P+GG K SG GR+ GLE L +++ ++V
Sbjct: 446 TGPTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV 480
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 185/377 (49%), Gaps = 14/377 (3%)
Query: 66 ANTLRYYAGAADKIHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 119
A + Y A ++ GEVL+ S+ REP+G+V I P+N+P + K+
Sbjct: 105 AEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKI 164
Query: 120 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 179
+PAL AG + KP Q + L A AG+P GV N + G G G I H ++
Sbjct: 165 APALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVN 224
Query: 180 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 239
++FTGST +G ++ + A ++P+ LELGGK ++ +D D+ A + G G
Sbjct: 225 FINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSG 281
Query: 240 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 299
+ C A RV V E + DE +K+ EK A +G+P D A P +D K D + I
Sbjct: 282 QRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLIND 340
Query: 300 GKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 359
+GAT LT P +F VT DM +A E FGPV+ +++ +VEEAI+
Sbjct: 341 ANDKGATALTEIKREGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEI 397
Query: 360 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCG 418
+N + YGL A I T D A ++ + G + IN +D P+ G K SG G
Sbjct: 398 SNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGV 457
Query: 419 LESLHNYLQVKSVVTPI 435
S+ VKSVV I
Sbjct: 458 KYSIEAMTTVKSVVFDI 474
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 200/379 (52%), Gaps = 8/379 (2%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWN 109
G S A + +I A N + A ++HG + + + R GVVG I PWN
Sbjct: 101 GSTRSKANL-EITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWN 159
Query: 110 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTA 168
FP + V+PALA G +++KPA TP+ + A + + AGVP GV++ V G G
Sbjct: 160 FPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEI 219
Query: 169 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN-LKPVSLELGGKSPLLIFDDVDVNTAA 227
G +H +SFTGST VGR+V + A +K V+LELGG +P ++ D D++ AA
Sbjct: 220 GDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAA 279
Query: 228 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDK 287
A +G ++G+IC++ +RV V ++DEF +K VE K GDP GP ++
Sbjct: 280 QAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVIND 339
Query: 288 KQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMAL 347
Q + IE K+EGAT+ P +F++VT DM IA+ EIFGP++++
Sbjct: 340 SQLSGLKEKIELAKKEGATV---QVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISV 396
Query: 348 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDS-DCPYG 406
+K A + AN + +GL+A + +KD++ A + I +G++ IN D +G
Sbjct: 397 LKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFG 456
Query: 407 GYKMSGFGRDCGLESLHNY 425
G K SG GR G ++ +
Sbjct: 457 GSKNSGLGRFNGDWAIEEF 475
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 185/377 (49%), Gaps = 14/377 (3%)
Query: 66 ANTLRYYAGAADKIHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 119
A + Y A ++ GEVL+ S+ REP+G+V I P+N+P + K+
Sbjct: 105 AEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKI 164
Query: 120 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 179
+PAL AG + KP Q + L A AG+P GV N + G G G I H ++
Sbjct: 165 APALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVN 224
Query: 180 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 239
++F+GST +G ++ + A ++P+ LELGGK ++ +D D+ A + G G
Sbjct: 225 FINFSGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSG 281
Query: 240 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 299
+ C A RV V E + DE +K+ EK A +G+P D A P +D K D + I
Sbjct: 282 QRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLIND 340
Query: 300 GKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 359
+GAT LT P +F VT DM +A E FGPV+ +++ +VEEAI+
Sbjct: 341 ANDKGATALTEIKREGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEI 397
Query: 360 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCG 418
+N + YGL A I T D A ++ + G + IN +D P+ G K SG G
Sbjct: 398 SNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGV 457
Query: 419 LESLHNYLQVKSVVTPI 435
S+ VKSVV I
Sbjct: 458 KYSIEAMTTVKSVVFDI 474
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 184/377 (48%), Gaps = 14/377 (3%)
Query: 66 ANTLRYYAGAADKIHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 119
A + Y A ++ GEVL+ S+ REP+G+V I P+N+P + K+
Sbjct: 105 AEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKI 164
Query: 120 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 179
+PAL AG + KP Q + L A AG+P GV N + G G G I H ++
Sbjct: 165 APALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVN 224
Query: 180 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 239
++FTGST +G ++ + A ++P+ L LGGK ++ +D D+ A + G G
Sbjct: 225 FINFTGSTGIGERIGKMAG---MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSG 281
Query: 240 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 299
+ C A RV V E + DE +K+ EK A +G+P D A P +D K D + I
Sbjct: 282 QRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLIND 340
Query: 300 GKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 359
+GAT LT P +F VT DM +A E FGPV+ +++ +VEEAI+
Sbjct: 341 ANDKGATALTEIKREGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEI 397
Query: 360 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCG 418
+N + YGL A I T D A ++ + G + IN +D P+ G K SG G
Sbjct: 398 SNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGV 457
Query: 419 LESLHNYLQVKSVVTPI 435
S+ VKSVV I
Sbjct: 458 KYSIEAMTTVKSVVFDI 474
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 184/377 (48%), Gaps = 14/377 (3%)
Query: 66 ANTLRYYAGAADKIHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 119
A + Y A ++ GEVL+ S+ REP+G+V I P+N+P + K+
Sbjct: 105 AEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKI 164
Query: 120 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 179
+PAL AG + KP Q + L A AG+P GV N + G G G I H ++
Sbjct: 165 APALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVN 224
Query: 180 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 239
++FTGST +G ++ + A ++P+ LELGGK ++ +D D+ A + G G
Sbjct: 225 FINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSG 281
Query: 240 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 299
+ A RV V E + DE +K+ EK A +G+P D A P +D K D + I
Sbjct: 282 QRSTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLIND 340
Query: 300 GKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 359
+GAT LT P +F VT DM +A E FGPV+ +++ +VEEAI+
Sbjct: 341 ANDKGATALTEIKREGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEI 397
Query: 360 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCG 418
+N + YGL A I T D A ++ + G + IN +D P+ G K SG G
Sbjct: 398 SNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGV 457
Query: 419 LESLHNYLQVKSVVTPI 435
S+ VKSVV I
Sbjct: 458 KYSIEAMTTVKSVVFDI 474
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 180/344 (52%), Gaps = 17/344 (4%)
Query: 81 GEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 137
G V ++ ++G T R P+GV+ I P+NFP + ++PA+A G +++ KP QT
Sbjct: 123 GGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQT 182
Query: 138 PL-----IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 192
+ IA F H AG+P GVLNV+ G + ++ +SFTGST VGR
Sbjct: 183 AISGGTIIAKAFEH----AGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRH 238
Query: 193 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 252
+ + A + K ++LELGG +P + D DV+ A D A+ G ++G+IC+ +R+ V +
Sbjct: 239 IGEIAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQ 297
Query: 253 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 312
+YDEF +K + K GD DP GP ++++Q ++ L IE K +G L
Sbjct: 298 DVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357
Query: 313 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 372
P +F + IA+ E+F P+ ++K + +EAI AN+T YGL++ +
Sbjct: 358 RVGNVLT---PYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVF 414
Query: 373 TKDLNVANTVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGR 415
T DL + I +G+ +N DS + +GG K SG GR
Sbjct: 415 TSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGR 458
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 197/389 (50%), Gaps = 14/389 (3%)
Query: 59 MGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 117
+G++ + + AGA + G+ L ++ ++ R PIGVVG I P+NFP +
Sbjct: 101 LGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCW 160
Query: 118 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 177
A+A G T I+KP+E+TPL+ L + AG+P GV NVV G I H +
Sbjct: 161 MFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNG-ILEHPE 219
Query: 178 IDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 237
I +SF GS VG V + + NLK V G K+ ++ +D ++ + +
Sbjct: 220 IKAISFVGSKPVGEYVYKKG-SENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGS 278
Query: 238 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 297
GE C+A + V V+EGI DEF KL EK +G+ D V GP + + R LSYI
Sbjct: 279 AGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYI 338
Query: 298 EHGKREGATLLTX-XXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 356
E G EGA L+ PTIF NVT +M I K+EIF PV+++++ K ++EA
Sbjct: 339 EKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEA 398
Query: 357 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN----CYFAFDSDCPYGGYKMSG 412
I+ AN + + A + T + N +I AG++ IN AF P+ G+K S
Sbjct: 399 IEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAF---FPFSGWKSSF 455
Query: 413 FG--RDCGLESLHNYLQVKSVVTPIFNSP 439
FG G +S+ Y + K VVT + +P
Sbjct: 456 FGTLHANGKDSVDFYTR-KKVVTARYPAP 483
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 178/345 (51%), Gaps = 13/345 (3%)
Query: 93 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA- 151
+T REP+G+VG I P+NFP + K++PA+A G ++ P+ + PL+ + A + + A
Sbjct: 125 FTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENAL 184
Query: 152 ---GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 208
VP GV N++ G G G I + ++ +SFTGS+ VG + + A K ++LE
Sbjct: 185 KKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALE 241
Query: 209 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 268
LGG +P ++ D D+N A + + G G++C++ + V E I D+F + V KAK
Sbjct: 242 LGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKV 301
Query: 269 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTN 328
VG+P D GP + + + + +E EG LL PTI
Sbjct: 302 LNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFY---PTIL-E 357
Query: 329 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388
V D ++ K E F PV+ +++ EE I AN+T YGL + I T D+N + + ++
Sbjct: 358 VDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEF 416
Query: 389 GIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
G + IN F D P+GG K SG GR+ ++ +K+++
Sbjct: 417 GGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 186/374 (49%), Gaps = 19/374 (5%)
Query: 53 LHSWAK-----MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL------REPIGV 101
+H AK +G++ A+ +R+ A A +++GE LK + G + REP+GV
Sbjct: 96 MHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGV 155
Query: 102 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 161
V I P+N+P + K++PAL G T++ KPA Q L + AG P+G++ VV
Sbjct: 156 VLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVV 215
Query: 162 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 221
G G G + H ID ++FTG T G ++ + A + PV LELGGK P ++ DD
Sbjct: 216 TGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA---KMIPVVLELGGKDPAIVLDDA 272
Query: 222 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 281
D+ A + G G+ C A RV+VQ+ + D+ + E + VG P D A
Sbjct: 273 DLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDA-DI 331
Query: 282 GPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIF 341
P +D+K I I+ GATLL+ PT+ +VT M +A E F
Sbjct: 332 TPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLS---PTLLDDVTPAMRVAWEEPF 388
Query: 342 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDS 401
GPV+ +++ K EAI +N + YGL A I TKD + A + + + G + IN
Sbjct: 389 GPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGP 448
Query: 402 D-CPYGGYKMSGFG 414
D P+ G K SG G
Sbjct: 449 DHFPFLGVKKSGLG 462
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 186/368 (50%), Gaps = 13/368 (3%)
Query: 61 DIPGAANTLRYYAGAADKIHGEVLKMSRA---LQGYTLREPIGVVGHIIPWNFPTTMFFM 117
D+ A + L YYA ++ G+ ++ A L Y EP GV I PWNFP +
Sbjct: 628 DVTEAIDFLEYYAREMIRL-GQPQRVGHAPGELNHY-FYEPKGVAAVIAPWNFPLAISMG 685
Query: 118 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 177
S A+ G ++ KP+ T +I + L + AG+P+GV N PG G G + H D
Sbjct: 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPD 745
Query: 178 IDKVSFTGSTDVGRQVMQAAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232
I ++FTGS + G ++++ AA +N+K + E+GGK+ ++I DD D++ A L
Sbjct: 746 ISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLY 805
Query: 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 292
+G+ C A SRV V + +YD+F ++LV AKA VG DPA G D K
Sbjct: 806 SAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKS 865
Query: 293 ILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 352
I Y E GKREG L TI + + IA+ EIFGPV+A+M+ K
Sbjct: 866 IKEYAEIGKREGHVLYESPVPAGEGYFVPM-TIIGGIKPEHRIAQEEIFGPVLAVMRAKD 924
Query: 353 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI--NCYFAFDSDCPYGGYKM 410
++AI+ AN+T++ L GI ++ R R G ++I N A P+GG +M
Sbjct: 925 FDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARM 984
Query: 411 SGFGRDCG 418
SG G G
Sbjct: 985 SGVGTKAG 992
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 195/381 (51%), Gaps = 12/381 (3%)
Query: 61 DIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 118
D+ A + + YYA AA + +++ + P+G I PWNFP +F
Sbjct: 134 DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGM 193
Query: 119 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 178
+ +A G T+I KPAE ++ + AG P GV+N +PG G GA + H I
Sbjct: 194 IVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRI 253
Query: 179 DKVSFTGSTDVGRQVMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233
++FTGS +VG ++ +AA + K +E GGK+ +++ + D + AA+ ++
Sbjct: 254 RFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVS 313
Query: 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 293
+G+ C A+SR+ + +G Y+ ++++++A+ VG P + GP V +Q ++
Sbjct: 314 AYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKV 372
Query: 294 LSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 353
LSYIE GK EG +L PT+FT V IA+ EIFGPV+++++ K
Sbjct: 373 LSYIEIGKNEGQLVLGGKRLEGEGYFIA-PTVFTEVPPKARIAQEEIFGPVLSVIRVKDF 431
Query: 354 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF--AFDSDCPYGGYKMS 411
EA++ AN+T YGL G+ ++ R G ++ N A P+GG+K+S
Sbjct: 432 AEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
Query: 412 GFGRDCG-LESLHNYLQVKSV 431
G G L+ L +L++K+V
Sbjct: 492 GTNAKTGALDYLRLFLEMKAV 512
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 194/381 (50%), Gaps = 12/381 (3%)
Query: 61 DIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 118
D+ A + + YYA AA + +++ + P+G I PWNFP +F
Sbjct: 134 DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGM 193
Query: 119 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 178
+ +A G T+I KPAE ++ + AG P GV+N +PG G GA + H I
Sbjct: 194 IVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRI 253
Query: 179 DKVSFTGSTDVGRQVMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233
++FTGS +VG ++ +AA + K +E GGK +++ + D + AA+ ++
Sbjct: 254 RFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVS 313
Query: 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 293
+G+ C A+SR+ + +G Y+ ++++++A+ VG P + GP V +Q ++
Sbjct: 314 AYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKV 372
Query: 294 LSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 353
LSYIE GK EG +L PT+FT V IA+ EIFGPV+++++ K
Sbjct: 373 LSYIEIGKNEGQLVLGGKRLEGEGYFIA-PTVFTEVPPKARIAQEEIFGPVLSVIRVKDF 431
Query: 354 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF--AFDSDCPYGGYKMS 411
EA++ AN+T YGL G+ ++ R G ++ N A P+GG+K+S
Sbjct: 432 AEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
Query: 412 GFGRDCG-LESLHNYLQVKSV 431
G G L+ L +L++K+V
Sbjct: 492 GTNAKTGALDYLRLFLEMKAV 512
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 193/381 (50%), Gaps = 12/381 (3%)
Query: 61 DIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 118
D+ A + + YYA AA + +++ + P+G I PWNFP +F
Sbjct: 134 DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGM 193
Query: 119 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 178
+ +A G T+I KPAE ++ + AG P GV+N +PG G GA + H I
Sbjct: 194 IVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRI 253
Query: 179 DKVSFTGSTDVGRQVMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233
++FTGS +VG ++ +AA + K +E GGK +++ + D + AA+ ++
Sbjct: 254 RFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVS 313
Query: 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 293
+G+ A+SR+ + +G Y+ ++++++A+ VG P + GP V +Q ++
Sbjct: 314 AYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKV 372
Query: 294 LSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 353
LSYIE GK EG +L PT+FT V IA+ EIFGPV+++++ K
Sbjct: 373 LSYIEIGKNEGQLVLGGKRLEGEGYFIA-PTVFTEVPPKARIAQEEIFGPVLSVIRVKDF 431
Query: 354 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF--AFDSDCPYGGYKMS 411
EA++ AN+T YGL G+ ++ R G ++ N A P+GG+K+S
Sbjct: 432 AEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLS 491
Query: 412 GFGRDCG-LESLHNYLQVKSV 431
G G L+ L +L++K+V
Sbjct: 492 GTNAKTGALDYLRLFLEMKAV 512
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 185/379 (48%), Gaps = 14/379 (3%)
Query: 59 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMF 115
+G++ + Y G + I G VL R G+ L E P+G+VG I +NFP ++
Sbjct: 115 VGEVQEYVDVCDYAVGLSRMIGGPVLPSERP--GHALIEQWNPVGLVGIITAFNFPVAVY 172
Query: 116 FMKVSPALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGFGPTAGAA 171
+ AL G + K A TPL ++ A + + +P + ++ G G G A
Sbjct: 173 GWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCG-GADIGTA 231
Query: 172 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231
+A +D +SFTGST VG+ V + + LELGG + +++F+D D+N A+
Sbjct: 232 MAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKL-LELGGNNAIIVFEDADLNLVVPSAV 290
Query: 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFD 291
+ G+ C + R+ + E ++D +++ + K +GDP+DP+ GP K+ D
Sbjct: 291 FASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVD 350
Query: 292 RILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 351
+ L+ IE K++G TL+ EPTI T + D I E F P++ ++KFK
Sbjct: 351 QYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFK 410
Query: 352 TVEEAIKSANNTRYGLAAGIMTKDLNVANTV--SRSIRAGIIWINC-YFAFDSDCPYGGY 408
T EEA N + GL++ I TKDL + GI+ +N + +GG
Sbjct: 411 TEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGE 470
Query: 409 KMSGFGRDCGLESLHNYLQ 427
K +G GR+ G +S Y++
Sbjct: 471 KHTGGGRESGSDSWKQYMR 489
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 151/334 (45%), Gaps = 2/334 (0%)
Query: 98 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 157
P+GV+ I PWNFP P L AG + ++K A A A + AG P GV
Sbjct: 126 PLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGV 185
Query: 158 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 217
V I + I V+ TGS + A A + LK LELGG P ++
Sbjct: 186 YGWVNANNEGVSQXI-NDPRIAAVTVTGSVRA-GAAIGAQAGAALKKCVLELGGSDPFIV 243
Query: 218 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 277
+D D+ A A+ G N G++C A+ R V+EGI F + V A A GDP
Sbjct: 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVE 303
Query: 278 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAK 337
GP D + ++ EGA LL T+ +VT D +
Sbjct: 304 ENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFR 363
Query: 338 NEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 397
E+FGPV A+ K A+ AN++ +GL+A I T D +A + + G ++IN Y
Sbjct: 364 QELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYS 423
Query: 398 AFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
A D+ +GG K SGFGR+ LH + V++V
Sbjct: 424 ASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 167/351 (47%), Gaps = 14/351 (3%)
Query: 98 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD-- 155
P +VG I PWNFP T+ + PAL AGC ++VKP+E P L L VP+
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPL--LXALNTVPELR 183
Query: 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 215
VL V G G T GA + +++D V FTGS GR+V + AA P LELGGK P
Sbjct: 184 DVLIFVEGGGET-GANLINYVDF--VCFTGSVATGREVAETAA-RRFIPAYLELGGKDPA 239
Query: 216 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 275
++ + ++ A L G + N G+ C++ R+YV E ++EF +L+ KA + P
Sbjct: 240 IVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPL 299
Query: 276 DPAVRQGPQVDKKQFDRILSYIEHGKREGATL-LTXXXXXXXXXXXXEPTIFTNVTEDML 334
GP + +KQ I +I +GA + PT+ TNV
Sbjct: 300 VEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNHSXK 359
Query: 335 IAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394
+ E FGP+ + F VEEA+ AN+T YGL+A + + A V+R + AG I IN
Sbjct: 360 VXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISIN 419
Query: 395 --CYFAFDSDCPYGGYKMSGF-GRDCGLESLHNYLQVKS--VVTPIFNSPW 440
A + + SG G G L +L+ ++ + T + PW
Sbjct: 420 DAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPW 470
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 176/357 (49%), Gaps = 18/357 (5%)
Query: 89 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 148
+ Y++R+P+G+ I P+NFP + +PA+A G I+KP+E+ P + + A L
Sbjct: 153 GIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELX 212
Query: 149 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 208
AG+P G+LNVV G A AI +H DI VSF GST + R V AA N K
Sbjct: 213 IEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAX-NGKRAQCF 270
Query: 209 LGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVA-SSRVYVQEGIYDEFEKKLVEKA 266
G K+ +I D D++ AA+ AL+G + + GE C A S V V E + KLV
Sbjct: 271 GGAKNHXIIXPDADLDQAAN-ALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXV 329
Query: 267 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTI- 325
++ +G D GP V K+ RI S I+ G +GA L+ I
Sbjct: 330 ESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIG 389
Query: 326 ---FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 382
F +VT D I K EIFGPV+++++ + EEA+ YG I T+D + A
Sbjct: 390 GCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDF 449
Query: 383 SRSIRAGIIWIN----CYFAFDSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVT 433
+ I G + +N A+ S +GG+K S FG G +S+ + + K++ +
Sbjct: 450 ASRINIGXVGVNVPIPVPLAYHS---FGGWKSSSFGDLNQHGTDSIKFWTRTKTITS 503
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 32/388 (8%)
Query: 59 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMF 115
+G++ + Y G + I G +L R+ G+ L E P+G+VG I +NFP ++
Sbjct: 117 VGEVQEYVDICDYAVGLSRMIGGPILPSERS--GHALIEQWNPVGLVGIITAFNFPVAVY 174
Query: 116 FMKVSPALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGFGPTAGAA 171
+ A+ G + K A T LI++ A + + +P + ++ G G G A
Sbjct: 175 GWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTA 233
Query: 172 IASHMDIDKVSFTGSTDVGRQV---MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAAD 228
+A ++ +SFTGST VG+QV +Q +L LELGG + ++ F+D D++
Sbjct: 234 MAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSL----LELGGNNAIIAFEDADLSLVVP 289
Query: 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKK 288
AL + G+ C + R+++ E I+DE +L + VG+P+DP V GP K+
Sbjct: 290 SALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQ 349
Query: 289 QFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALM 348
L +E K+EG T++ EPTI T + D IA E F P++ +
Sbjct: 350 AVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVF 409
Query: 349 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR--------AGIIWINC-YFAF 399
KF+ EE N + GL++ I TKDL R R GI+ +N
Sbjct: 410 KFQNEEEVFAWNNEVKQGLSSSIFTKDL------GRIFRWLGPKGSDCGIVNVNIPTSGA 463
Query: 400 DSDCPYGGYKMSGFGRDCGLESLHNYLQ 427
+ +GG K +G GR+ G ++ Y++
Sbjct: 464 EIGGAFGGEKHTGGGRESGSDAWKQYMR 491
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 170/372 (45%), Gaps = 15/372 (4%)
Query: 51 GKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRAL----QGYTLREPIGVVGHI 105
GKL S +K ++ + YYA HG E LK ++ Y L++ GV+
Sbjct: 77 GKLLSESKE-EVELCVSICNYYAD-----HGPEXLKPTKLNSDLGNAYYLKQSTGVIXAC 130
Query: 106 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL-NVVPGF 164
PWNFP +P G +++K A P A A + K AG P+G L N+ P +
Sbjct: 131 EPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSY 190
Query: 165 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 224
A I + I V+ TGS G V +AA NLK + ELGG ++ DD D
Sbjct: 191 DQLAD--IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTXELGGNDAFIVLDDADPQ 247
Query: 225 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 284
++ +N G++C +S R+ V++ YDE +L GDP + P
Sbjct: 248 VLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPX 307
Query: 285 VDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPV 344
+K +++ + ++ GA + PTI T++ +D + E+FGP+
Sbjct: 308 NSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPI 367
Query: 345 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCP 404
+ + AI+ AN++ YGL + ++ D++ A VS I G IN + + P
Sbjct: 368 AEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVINGRWITSGELP 427
Query: 405 YGGYKMSGFGRD 416
+GG K SG+GR+
Sbjct: 428 FGGIKKSGYGRE 439
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 197/439 (44%), Gaps = 37/439 (8%)
Query: 2 LILPSRQHVRRLITV---------HGHVFLEPRGIMLKFADXXXXXXXXXXXXXXXXXGK 52
+I PSR+ V R + V E ++ K AD GK
Sbjct: 48 VISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGK 107
Query: 53 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIP 107
S A +G++ A + LR KI G+ + + +G REP+GVV I P
Sbjct: 108 PKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITP 166
Query: 108 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT 167
+N+P K++ + G ++VKP+ PL A AG P + ++ G
Sbjct: 167 FNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE 226
Query: 168 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA 227
A +A + VSFTGST+VG +V++ +K +ELGG P ++ +D D++ AA
Sbjct: 227 AEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYVMELGGGDPAIVLEDADLDLAA 282
Query: 228 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDK 287
D GI G+ C A V + +Y + +++ ++ + VGDP DP V GP +
Sbjct: 283 DKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISP 342
Query: 288 KQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF---TNVTEDMLIAKNEIFGPV 344
D +++ IE +G +L +PT+ + +DM++ K E+F PV
Sbjct: 343 SAVDEMMAAIEDAVEKGGRVLA--GGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPV 400
Query: 345 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-------CYF 397
+ ++ K +++AI+ AN YGL A + +D+ R + G I+IN Y+
Sbjct: 401 ASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYY 460
Query: 398 AFDSDCPYGGYKMSGFGRD 416
P+GG K SG R+
Sbjct: 461 ------PFGGRKKSGVFRE 473
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 196/439 (44%), Gaps = 37/439 (8%)
Query: 2 LILPSRQHVRRLITV---------HGHVFLEPRGIMLKFADXXXXXXXXXXXXXXXXXGK 52
+I PSR+ V R + V E ++ K AD GK
Sbjct: 48 VISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGK 107
Query: 53 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIP 107
S A +G++ A + LR KI G+ + + +G REP+GVV I P
Sbjct: 108 PKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITP 166
Query: 108 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT 167
+N+P K++ + G ++VKP+ PL A AG P + ++ G
Sbjct: 167 FNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE 226
Query: 168 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA 227
A +A + VSFTGST+VG +V++ +K +ELGG P ++ +D D++ AA
Sbjct: 227 AEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYVMELGGGDPAIVLEDADLDLAA 282
Query: 228 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDK 287
D GI G+ C A V + +Y + +++ ++ + VGDP DP V GP +
Sbjct: 283 DKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISP 342
Query: 288 KQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF---TNVTEDMLIAKNEIFGPV 344
D +++ IE +G +L +PT+ + +DM++ K E+F PV
Sbjct: 343 SAVDEMMAAIEDAVEKGGRVLA--GGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPV 400
Query: 345 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-------CYF 397
++ K +++AI+ AN YGL A + +D+ R + G I+IN Y+
Sbjct: 401 ALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYY 460
Query: 398 AFDSDCPYGGYKMSGFGRD 416
P+GG K SG R+
Sbjct: 461 ------PFGGRKKSGVFRE 473
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 195/439 (44%), Gaps = 37/439 (8%)
Query: 2 LILPSRQHVRRLITV---------HGHVFLEPRGIMLKFADXXXXXXXXXXXXXXXXXGK 52
+I PSR+ V R + V E ++ K AD GK
Sbjct: 48 VISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGK 107
Query: 53 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIP 107
S A +G++ A + LR KI G+ + + +G REP+GVV I P
Sbjct: 108 PKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITP 166
Query: 108 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT 167
+N+P K++ + G ++VKP+ PL A AG P + ++ G
Sbjct: 167 FNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE 226
Query: 168 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA 227
A +A + VSFTGST+VG +V++ +K +ELGG P ++ +D D++ AA
Sbjct: 227 AEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYVMELGGGDPAIVLEDADLDLAA 282
Query: 228 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDK 287
D GI G+ C A V + +Y + +++ ++ + VGDP DP V GP +
Sbjct: 283 DKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISP 342
Query: 288 KQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF---TNVTEDMLIAKNEIFGPV 344
D +++ IE +G +L +PT + +DM++ K E+F PV
Sbjct: 343 SAVDEMMAAIEDAVEKGGRVLA--GGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPV 400
Query: 345 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-------CYF 397
++ K +++AI+ AN YGL A + +D+ R + G I+IN Y+
Sbjct: 401 ALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYY 460
Query: 398 AFDSDCPYGGYKMSGFGRD 416
P+GG K SG R+
Sbjct: 461 ------PFGGRKKSGVFRE 473
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 175/372 (47%), Gaps = 22/372 (5%)
Query: 59 MGDIPGAANTLRYYAGAADKIHGEVLKM------SRALQGYTLREPIGVVGHIIPWNFPT 112
+ ++ AA+ RYYA K+ G M S AL T+R GV I PWNFP
Sbjct: 608 LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNAL---TMRGR-GVFVAISPWNFPL 663
Query: 113 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 172
+F +V+ AL AG +++ KPAEQTP IA L AG+P L +V G G GAA+
Sbjct: 664 AIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAAL 722
Query: 173 ASHMDIDKVSFTGSTDVGRQVMQAAATSN--LKPVSLELGGKSPLLIFDDVDVNTAADMA 230
+H DI V FTGST+V R + +A A + + P+ E GG + ++ AD
Sbjct: 723 TAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782
Query: 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 290
+ + G+ C A ++VQE + D + + A+ +GDP D A GP +D +
Sbjct: 783 VTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAK 842
Query: 291 DRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 350
R+ ++I K E P IF L E+FGP++ ++++
Sbjct: 843 QRLDAHIARMKTEARLHFAGPAPEGCFVA---PHIFELTEAGQLT--EEVFGPILHVVRY 897
Query: 351 K--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF--AFDSDCPYG 406
+ +E +++ T YGL G+ ++ + + ++ G I++N A P+G
Sbjct: 898 RPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFG 957
Query: 407 GYKMSGFGRDCG 418
G +SG G G
Sbjct: 958 GNGLSGTGPKAG 969
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 167/345 (48%), Gaps = 18/345 (5%)
Query: 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150
+ Y ++EP GV I P+N+P + + A+ G T I+KP+E TP + +
Sbjct: 123 ECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE 182
Query: 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 210
A P+ V V+ G G + + S + D + FTGS +VG+ VMQAAA +L PV LELG
Sbjct: 183 AFAPEYV-AVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELG 238
Query: 211 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 270
GK PL++ D D++ + + G N G+ C+A +YV + D ++LVE+ K +
Sbjct: 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLERLVERVKTEL 298
Query: 271 VGDPFDPAVRQ-GPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 329
P + G V ++Q R++S +E +G L+ T+ V
Sbjct: 299 ------PEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQADVSKRALSA--TVVDGV 348
Query: 330 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR-YGLAAGIMTKDLNVANTVSRSIRA 388
+ + E+FGP++ +++F +V AI N LA + KD++VA + I++
Sbjct: 349 EWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQS 408
Query: 389 GIIWIN--CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
G +N AF P+GG SG G G S + KSV
Sbjct: 409 GDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 166/345 (48%), Gaps = 18/345 (5%)
Query: 91 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150
+ Y ++EP GV I P+N+P + + A+ G T I+KP+E TP + +
Sbjct: 123 ECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE 182
Query: 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 210
A P+ V V+ G G + + S + D + FTGS +VG+ VMQAAA +L PV LELG
Sbjct: 183 AFAPEYV-AVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELG 238
Query: 211 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 270
GK PL++ D D++ + + G N G+ +A +YV + D ++LVE+ K +
Sbjct: 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL 298
Query: 271 VGDPFDPAVRQ-GPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 329
P + G V ++Q R++S +E +G L+ T+ V
Sbjct: 299 ------PEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQADVSKRALSA--TVVDGV 348
Query: 330 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR-YGLAAGIMTKDLNVANTVSRSIRA 388
+ + E+FGP++ +++F +V AI N LA + KD++VA + I++
Sbjct: 349 EWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQS 408
Query: 389 GIIWIN--CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431
G +N AF P+GG SG G G S + KSV
Sbjct: 409 GDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 7/323 (2%)
Query: 97 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 156
+P GVV P+NFP + + PAL AG ++ KP+E TP +A AG+P G
Sbjct: 138 KPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAG 197
Query: 157 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 216
VLN+V G G G A+A+H +D + FTGS+ G + K ++LE GG +PL+
Sbjct: 198 VLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLV 256
Query: 217 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPF 275
+ + D++ A + + G+ C + R+ V +G + D +LV + VG F
Sbjct: 257 VEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGR-F 315
Query: 276 D--PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDM 333
D PA G + + +L EH +GA L P I +V+
Sbjct: 316 DEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAALLTPGIL-DVSAVA 374
Query: 334 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII-W 392
E FGP++ ++++ AI+ AN T+YGLAAG+++ RAGI+ W
Sbjct: 375 ERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNW 434
Query: 393 INCYFAFDSDCPYGGYKMSGFGR 415
S P+GG SG R
Sbjct: 435 NKQLTGAASSAPFGGIGASGNHR 457
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 162/355 (45%), Gaps = 20/355 (5%)
Query: 93 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152
Y EP+GVV I WN+P + + A+AAG +++KP+E + +A A +
Sbjct: 115 YIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174
Query: 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 212
D + V+ G P + D + +TGST VG+ +M AAA +L PV+LELGGK
Sbjct: 175 DKD-LYPVINGGVPETTELLKERFD--HILYTGSTGVGKIIMTAAA-KHLTPVTLELGGK 230
Query: 213 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 272
SP + + D++ A G N G+ CVA + I ++ +KL + K + G
Sbjct: 231 SPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YG 289
Query: 273 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTED 332
+ + G + + F R++ IE K + PTI T+V
Sbjct: 290 EDAKKSRDYGRIISARHFQRVMGLIEGQK------VAYGGTGDAATRYIAPTILTDVDPQ 343
Query: 333 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV-----ANTVSRSIR 387
+ + EIFGPV+ ++ +++EEAI+ N LA + + + V A T S +
Sbjct: 344 SPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVA 403
Query: 388 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS-VVTPIFNSPWL 441
A + ++ P+GG SG G G +S + +S +V P+ N L
Sbjct: 404 ANDVIVHITL---HSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGL 455
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 15/343 (4%)
Query: 93 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152
Y EP+GVV I WN+P + + A+AAG +I+KP+E + +A A L
Sbjct: 98 YIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIP-QY 156
Query: 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 212
+ + VV G P + D + +TGST VG+ VM AAA +L PV+LELGGK
Sbjct: 157 MDQNLYLVVKGGVPETTELLKERFD--HIMYTGSTAVGKIVM-AAAAKHLTPVTLELGGK 213
Query: 213 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 272
SP + D D++ A G N G+ CVA + I ++ +KL + K + G
Sbjct: 214 SPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YG 272
Query: 273 DPFDPAVRQGPQVDKKQFDRILSYIEHGK-REGATLLTXXXXXXXXXXXXEPTIFTNVTE 331
+ + G ++ + F R+ I++ K G T PTI +V
Sbjct: 273 EDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTW-------DQSSRYIAPTILVDVDP 325
Query: 332 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391
+ + EIFGPVM ++ +++EEAI+ N LA + + + V + +G +
Sbjct: 326 QSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGV 385
Query: 392 WINCYFAFDS--DCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432
N + P+GG SG G G +S + +S +
Sbjct: 386 TANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCL 428
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 149/332 (44%), Gaps = 25/332 (7%)
Query: 100 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 159
G V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 202 GFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQ 260
Query: 160 VVPGFGPTAGAAIASHMDIDKVSFTGST----DVGRQVMQAAATSNLKP-VSLELGGKSP 214
VP GPT G + S + ++FTGS + RQV Q P ++ E GGK+
Sbjct: 261 FVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNF 320
Query: 215 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 274
+ DV++ L G+ C A SR+YV + ++ + + +L+E+ VGDP
Sbjct: 321 HFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDP 380
Query: 275 ------FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFT 327
F AV +D K F RI ++EH + + ++L EP I
Sbjct: 381 AEDFGTFFSAV-----IDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIE 435
Query: 328 NVTEDMLIAKNEIFGPVMALMKF--KTVEEAIKSANN-TRYGLAAGIMTKDLNVANTVSR 384
+ I K EIFGPV+ + + E +K ++ T YGL + +D + +R
Sbjct: 436 SKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATR 495
Query: 385 SIR--AGIIWIN--CYFAFDSDCPYGGYKMSG 412
+R AG +IN + P+GG + SG
Sbjct: 496 MLRNAAGNFYINDKSTGSVVGQQPFGGARASG 527
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 19/329 (5%)
Query: 100 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 159
G V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 205 GFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQ 263
Query: 160 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSP 214
VP GP G + S + ++FTGS + + + A + ++ E GGK+
Sbjct: 264 FVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNF 323
Query: 215 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 274
+ DV + L G+ C A SR+YV ++ + + +L+E+ VGDP
Sbjct: 324 HFVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
Query: 275 F-DPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTNVTED 332
D +D K F RI ++EH + + T+L EP I +
Sbjct: 384 AEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQ 443
Query: 333 MLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 387
I K EIFGPV+++ K+K + + S T YGL + ++D +V ++ +R
Sbjct: 444 EPIMKEEIFGPVLSVYVYPDDKYKETLQLVDS--TTSYGLTGAVFSQDKDVVQEATKVLR 501
Query: 388 --AGIIWIN--CYFAFDSDCPYGGYKMSG 412
AG +IN + P+GG + SG
Sbjct: 502 NAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 146/329 (44%), Gaps = 19/329 (5%)
Query: 100 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 159
G V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 205 GFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQ 263
Query: 160 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSP 214
VP GP G + S + ++FTGS + + + A + ++ E GGK+
Sbjct: 264 FVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNF 323
Query: 215 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 274
+ DV + L G+ C A +R+YV ++ + + +L+E+ VGDP
Sbjct: 324 HFVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
Query: 275 F-DPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTNVTED 332
D +D K F RI ++EH + + T+L EP I +
Sbjct: 384 AEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQ 443
Query: 333 MLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 387
I K EIFGPV+++ K+K + + S T YGL + ++D +V ++ +R
Sbjct: 444 EPIMKEEIFGPVLSVYVYPDDKYKETLQLVDS--TTSYGLTGAVFSQDKDVVQEATKVLR 501
Query: 388 --AGIIWIN--CYFAFDSDCPYGGYKMSG 412
AG +IN + P+GG + SG
Sbjct: 502 NAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 19/329 (5%)
Query: 100 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 159
G V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 205 GFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQ 263
Query: 160 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSP 214
VP GP G + S + ++FTGS + + + A + ++ E GGK+
Sbjct: 264 FVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNF 323
Query: 215 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 274
+ DV + L G+ C A R+YV ++ + + +L+E+ VGDP
Sbjct: 324 HFVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
Query: 275 F-DPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTNVTED 332
D +D K F RI ++EH + + T+L EP I +
Sbjct: 384 AEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQ 443
Query: 333 MLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 387
I K EIFGPV+++ K+K + + S T YGL + ++D +V ++ +R
Sbjct: 444 EPIMKEEIFGPVLSVYVYPDDKYKETLQLVDS--TTSYGLTGAVFSQDKDVVQEATKVLR 501
Query: 388 --AGIIWIN--CYFAFDSDCPYGGYKMSG 412
AG +IN + P+GG + SG
Sbjct: 502 NAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 146/351 (41%), Gaps = 43/351 (12%)
Query: 61 DIPGAANTLRYYA--GAA-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNF 110
DI G TL YYA GA+ ++H E L R+ + P GV I +NF
Sbjct: 104 DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNF 163
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
P+ + K +PAL +G +IVKPA T L A + +P G L+++ G ++
Sbjct: 164 PSWGLWAKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSA 220
Query: 170 AAIASHMDIDKVSFTGSTDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDV 223
+ D VSFTGS D + +Q A N++ SL S +L D
Sbjct: 221 GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPD 276
Query: 224 NTAADMALLGIL----FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 279
A D+ + ++ G+ C A R +V E + + L K VG+P + AV
Sbjct: 277 TPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 336
Query: 280 RQGPQVDKKQFDRILSYIEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED-- 332
R G V ++Q++ +L+ I + E ++ + P +F D
Sbjct: 337 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNA 396
Query: 333 MLIAKNEIFGPVMALMKFKTVEE--------AIKSANNTRYGLAAGIMTKD 375
L+ E+FGPV ++ ++ + A+ A + L A I + D
Sbjct: 397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSND 447
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 146/351 (41%), Gaps = 43/351 (12%)
Query: 61 DIPGAANTLRYYA--GAA-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNF 110
DI G TL YYA GA+ ++H E L R+ + P GV I +NF
Sbjct: 104 DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNF 163
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
P+ + K +PAL +G +IVKPA T L A + +P G L+++ G ++
Sbjct: 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSA 220
Query: 170 AAIASHMDIDKVSFTGSTDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDV 223
+ D VSFTGS D + +Q A N++ SL S +L D
Sbjct: 221 GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSL----NSAILCADATPD 276
Query: 224 NTAADMALLGIL----FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 279
A D+ + ++ G+ C A R +V E + + L K VG+P + AV
Sbjct: 277 TPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 336
Query: 280 RQGPQVDKKQFDRILSYIEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED-- 332
R G V ++Q++ +L+ I + E ++ + P +F D
Sbjct: 337 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNA 396
Query: 333 MLIAKNEIFGPVMALMKFKTVEE--------AIKSANNTRYGLAAGIMTKD 375
L+ E+FGPV ++ ++ + A+ A + L A I + D
Sbjct: 397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSND 447
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 146/351 (41%), Gaps = 43/351 (12%)
Query: 61 DIPGAANTLRYYA--GAA-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNF 110
DI G TL YYA GA+ ++H E L R+ + P GV I +NF
Sbjct: 102 DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNF 161
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
P+ + K +PAL +G +IVKPA T L A + +P G L+++ G ++
Sbjct: 162 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSA 218
Query: 170 AAIASHMDIDKVSFTGSTDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDV 223
+ D VSFTGS D + +Q A N++ SL S +L D
Sbjct: 219 GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPD 274
Query: 224 NTAADMALLGIL----FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 279
A D+ + ++ G+ C A R +V E + + L K VG+P + AV
Sbjct: 275 TPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 334
Query: 280 RQGPQVDKKQFDRILSYIEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED-- 332
R G V ++Q++ +L+ I + E ++ + P +F D
Sbjct: 335 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNA 394
Query: 333 MLIAKNEIFGPVMALMKFKTVEE--------AIKSANNTRYGLAAGIMTKD 375
L+ E+FGPV ++ ++ + A+ A + L A I + D
Sbjct: 395 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSND 445
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 146/351 (41%), Gaps = 43/351 (12%)
Query: 61 DIPGAANTLRYYA--GAA-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNF 110
DI G TL YYA GA+ ++H E L R+ + P GV I +NF
Sbjct: 104 DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNF 163
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
P+ + K +PAL +G +IVKPA T L A + +P G L+++ G ++
Sbjct: 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSA 220
Query: 170 AAIASHMDIDKVSFTGSTDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDV 223
+ D VSFTGS D + +Q A N++ SL S +L D
Sbjct: 221 GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPD 276
Query: 224 NTAADMALLGIL----FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 279
A D+ + ++ G+ C A R +V E + + L K VG+P + AV
Sbjct: 277 TPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 336
Query: 280 RQGPQVDKKQFDRILSYIEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED-- 332
R G V ++Q++ +L+ I + E ++ + P +F D
Sbjct: 337 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNA 396
Query: 333 MLIAKNEIFGPVMALMKFKTVEE--------AIKSANNTRYGLAAGIMTKD 375
L+ E+FGPV ++ ++ + A+ A + L A I + D
Sbjct: 397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSND 447
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 145/351 (41%), Gaps = 43/351 (12%)
Query: 61 DIPGAANTLRYYA--GAA-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNF 110
DI G TL YYA GA+ ++H E L R+ + P GV I +NF
Sbjct: 104 DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNF 163
Query: 111 PTTMFFMKVSPALAAGCTMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAG 169
P+ + K +PAL +G +IVKPA T L A + +P G L+++ G ++
Sbjct: 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSA 220
Query: 170 AAIASHMDIDKVSFTGSTDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDV 223
+ D VSFTGS D + +Q A N++ SL S +L D
Sbjct: 221 GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPD 276
Query: 224 NTAADMALLGIL----FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 279
A D+ + ++ G+ A R +V E + + L K VG+P + AV
Sbjct: 277 TPAFDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 336
Query: 280 RQGPQVDKKQFDRILSYIEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED-- 332
R G V ++Q++ +L+ I + E ++ + P +F D
Sbjct: 337 RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNA 396
Query: 333 MLIAKNEIFGPVMALMKFKTVEE--------AIKSANNTRYGLAAGIMTKD 375
L+ E+FGPV ++ ++ + A+ A + L A I + D
Sbjct: 397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSND 447
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 9/184 (4%)
Query: 83 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTP 138
+L+ L T+ EP+G++ I+P PT+ K +L +I P T
Sbjct: 88 ILEEDDNLGTXTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTN 147
Query: 139 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 198
A A AG P ++ + A+ H DI + TG G ++AA
Sbjct: 148 DAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATG----GPGXVKAAY 203
Query: 199 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 258
+S KP G P++I + D+ A L F+ G +C + V V + +YDE
Sbjct: 204 SSG-KPAIGVGAGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEV 262
Query: 259 EKKL 262
+++
Sbjct: 263 KERF 266
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 84/212 (39%), Gaps = 26/212 (12%)
Query: 60 GDIPGAANTLRYYAGAADK--IHGEVLKM---SRA-LQGYTLRE------PIGVVGHIIP 107
G+I AN LR +A + H +L +RA L +R P+ V G
Sbjct: 89 GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGA--- 145
Query: 108 WNFPTTMFFM--KVSPALAAGCTMIVKPAEQTP----LIALYFAHLAKLAGVPDGVLNVV 161
NFP + ALAAGC +IVK P ++A K +P + ++
Sbjct: 146 SNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLL 205
Query: 162 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLIFD 219
G G A+ SH +I V FTGS GR + A +P+ ELG +P IF
Sbjct: 206 QGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN-LAHERPEPIPFYGELGAINPTFIFP 264
Query: 220 DVDVNTA--ADMALLGILFNKGEICVASSRVY 249
A AD + + G+ C V+
Sbjct: 265 SAMRAKADLADQFVASMTMGCGQFCTKPGVVF 296
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 68/181 (37%), Gaps = 11/181 (6%)
Query: 95 LREPIGVVGHIIPWNFPTTMFFM--KVSPALAAGCTMIVKPAEQTP----LIALYFAHLA 148
++ P+G V NFP + ALAAGC ++VK P ++A
Sbjct: 166 VQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAI 225
Query: 149 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ-AAATSNLKPVSL 207
+ GV GV +++ G G A+ H I V FTGS GR + AA P
Sbjct: 226 RKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFG 285
Query: 208 ELGGKSPLLIFDD---VDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLV 263
ELG +P + + T + G+ C V EG D F V
Sbjct: 286 ELGSVNPXFLLPEALKARAETLGQGWAGSLTXGAGQFCTNPGIAVVIEGADADRFTTAAV 345
Query: 264 E 264
E
Sbjct: 346 E 346
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 98 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY-----FAHLAKLAG 152
P+GVV +IP PT+ K ++ AG +++ P L A+ + A+ AG
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSP-HPNALKAILETVRIISEAAEKAG 166
Query: 153 VPDGVLN--VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 210
P G ++ VP T + H D + TG G +++AA +S + +
Sbjct: 167 CPKGAISCMTVPTIQGT--DQLMKHKDTAVILATG----GSAMVKAAYSSGTPAIGVG-P 219
Query: 211 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ----EGIYDEFEKK 261
G P I ++ A L F+ G IC + V V+ E + EF K+
Sbjct: 220 GNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQ 274
>pdb|3CMQ|A Chain A, Crystal Structure Of Human Mitochondrial Phenylalanine
Trna Synthetase
pdb|3HFV|A Chain A, Crystal Structure Of Human Mitochondrial Phenylalanyl-Trna
Synthetase Complexed With M-Tyrosine
pdb|3TEG|A Chain A, Bacterial And Eukaryotic Phenylalanyl-Trna Synthetases
Catalyze Misaminoacylation Of Trnaphe With
3,4-Dihydroxy-L-Phenylalanine (L- Dopa)
pdb|3TUP|A Chain A, Crystal Structure Of Human Mitochondrial Phers Complexed
With Trnaphe In The Active Open State
Length = 415
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 325 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384
IF + L +K+E+F + + E++ +SA+ + + ++ T++R
Sbjct: 154 IFHQLEAVRLFSKHELFAGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTR 213
Query: 385 SI------RAGIIWINCYFAF 399
+ I W++CYF F
Sbjct: 214 LMAHLFGDELEIRWVDCYFPF 234
>pdb|3CYV|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Shigella Flexineri: New Insights Into Its Catalytic
Mechanism
Length = 354
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 116 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV---LNVVPGFGPTAGAAI 172
FM + C + ++P + PL A + + VPD + L G GP + +
Sbjct: 46 FMSLCKNAELACEVTLQPLRRYPLDAAIL--FSDILTVPDAMGLGLYFEAGEGPRFTSPV 103
Query: 173 ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 218
D+DK+ D VM A T + EL G+ PL+ F
Sbjct: 104 TCKADVDKLPIPDPEDELGYVMNAVRT-----IRHELKGEVPLIGF 144
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 339 EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA 398
E ++A+ K V+EAI+ G + I+T++ + A I A +++N
Sbjct: 322 EYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTR 381
Query: 399 FDSDCPYGGYKMSGFGRDCGLES 421
F GG GFG + G+ +
Sbjct: 382 FTD----GG--QFGFGAEIGIST 398
>pdb|1JJU|A Chain A, Structure Of A Quinohemoprotein Amine Dehydrogenase With A
Unique Redox Cofactor And Highly Unusual Crosslinking
pdb|1PBY|A Chain A, Structure Of The Phenylhydrazine Adduct Of The
Quinohemoprotein Amine Dehydrogenase From Paracoccus
Denitrificans At 1.7 A Resolution
Length = 489
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 190 GRQVMQAAATSNLKPVSLELGG-KSPLLIFDDVD-VNTAADMALLGILFNKGEI 241
G V++ AT PVSLELGG K L+ +D D ++ D+ + I N G I
Sbjct: 321 GVTVLKLTATGTPGPVSLELGGQKVDLVAYDRPDRISIVPDLTIARIGGNGGPI 374
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,335,253
Number of Sequences: 62578
Number of extensions: 479726
Number of successful extensions: 1446
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1155
Number of HSP's gapped (non-prelim): 98
length of query: 441
length of database: 14,973,337
effective HSP length: 102
effective length of query: 339
effective length of database: 8,590,381
effective search space: 2912139159
effective search space used: 2912139159
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)