Query 013526
Match_columns 441
No_of_seqs 176 out of 1379
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 12:14:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013526.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013526hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 3.9E-97 1E-101 757.9 51.3 435 4-438 40-486 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 2.3E-93 7.8E-98 735.7 51.3 436 4-441 66-518 (520)
3 3ifg_A Succinate-semialdehyde 100.0 2E-93 6.7E-98 731.5 47.3 429 4-434 46-483 (484)
4 3ros_A NAD-dependent aldehyde 100.0 2.8E-93 9.7E-98 729.7 48.1 429 4-435 22-458 (484)
5 3rh9_A Succinate-semialdehyde 100.0 5.5E-93 1.9E-97 730.6 49.8 430 4-435 45-484 (506)
6 3u4j_A NAD-dependent aldehyde 100.0 9.1E-93 3.1E-97 732.5 50.4 435 5-441 58-505 (528)
7 1bxs_A Aldehyde dehydrogenase; 100.0 1.7E-92 5.8E-97 726.9 51.1 433 4-436 54-497 (501)
8 3iwj_A Putative aminoaldehyde 100.0 1E-92 3.6E-97 730.0 49.4 436 4-441 41-497 (503)
9 4f3x_A Putative aldehyde dehyd 100.0 9E-93 3.1E-97 728.4 47.8 430 4-435 58-497 (498)
10 3ek1_A Aldehyde dehydrogenase; 100.0 7.9E-93 2.7E-97 729.2 46.2 429 4-436 66-503 (504)
11 1o04_A Aldehyde dehydrogenase, 100.0 1.6E-92 5.4E-97 726.9 47.6 432 5-436 54-496 (500)
12 2o2p_A Formyltetrahydrofolate 100.0 2.2E-92 7.4E-97 728.0 48.6 431 5-435 71-517 (517)
13 1a4s_A ALDH, betaine aldehyde 100.0 4.7E-92 1.6E-96 724.5 48.9 432 4-438 54-499 (503)
14 3k2w_A Betaine-aldehyde dehydr 100.0 5.7E-92 2E-96 723.5 47.6 431 4-436 46-489 (497)
15 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.7E-91 9.1E-96 720.9 51.2 430 4-436 60-506 (515)
16 3b4w_A Aldehyde dehydrogenase; 100.0 8.3E-92 2.8E-96 721.4 47.0 418 16-436 64-483 (495)
17 3jz4_A Succinate-semialdehyde 100.0 2.2E-91 7.6E-96 717.4 50.2 429 4-434 43-480 (481)
18 3r31_A BADH, betaine aldehyde 100.0 3.7E-92 1.3E-96 726.3 44.0 431 4-440 48-495 (517)
19 3prl_A NADP-dependent glyceral 100.0 1.4E-91 4.7E-96 720.8 47.9 425 4-436 45-484 (505)
20 2ve5_A BADH, betaine aldehyde 100.0 4.3E-91 1.5E-95 717.4 51.0 434 4-438 40-486 (490)
21 1wnd_A Putative betaine aldehy 100.0 2.9E-91 9.8E-96 716.7 49.0 428 4-434 56-494 (495)
22 3qan_A 1-pyrroline-5-carboxyla 100.0 2.7E-91 9.2E-96 723.1 48.8 430 4-436 70-517 (538)
23 2imp_A Lactaldehyde dehydrogen 100.0 4E-91 1.4E-95 715.2 49.1 429 4-434 40-478 (479)
24 3i44_A Aldehyde dehydrogenase; 100.0 8.7E-91 3E-95 713.5 51.5 425 4-432 59-495 (497)
25 4e4g_A Methylmalonate-semialde 100.0 7.9E-91 2.7E-95 717.0 47.9 430 4-436 60-506 (521)
26 3etf_A Putative succinate-semi 100.0 2.3E-90 7.8E-95 707.5 49.9 429 4-435 25-461 (462)
27 3pqa_A Lactaldehyde dehydrogen 100.0 1.4E-90 4.9E-95 710.0 47.7 423 4-436 30-465 (486)
28 2w8n_A Succinate-semialdehyde 100.0 7.8E-91 2.7E-95 713.4 44.0 428 4-434 44-485 (487)
29 1uxt_A Glyceraldehyde-3-phosph 100.0 1.9E-90 6.3E-95 712.3 45.9 428 5-440 51-498 (501)
30 3r64_A NAD dependent benzaldeh 100.0 4.3E-90 1.5E-94 711.3 47.8 427 4-436 46-486 (508)
31 4dng_A Uncharacterized aldehyd 100.0 6.4E-90 2.2E-94 707.8 46.2 431 4-439 40-482 (485)
32 2j6l_A Aldehyde dehydrogenase 100.0 1.9E-89 6.6E-94 705.2 49.2 429 4-435 55-499 (500)
33 1uzb_A 1-pyrroline-5-carboxyla 100.0 3.2E-89 1.1E-93 706.1 49.9 429 4-435 70-516 (516)
34 1euh_A NADP dependent non phos 100.0 1.6E-89 5.6E-94 702.6 47.3 424 4-435 36-474 (475)
35 1t90_A MMSDH, probable methylm 100.0 9.6E-89 3.3E-93 698.2 46.7 430 5-438 40-483 (486)
36 3ty7_A Putative aldehyde dehyd 100.0 4.3E-89 1.5E-93 700.4 43.9 424 4-433 41-475 (478)
37 4h7n_A Aldehyde dehydrogenase; 100.0 4.4E-88 1.5E-92 691.8 44.2 432 3-440 23-470 (474)
38 3sza_A Aldehyde dehydrogenase, 100.0 1.3E-87 4.6E-92 685.8 47.1 420 5-435 15-448 (469)
39 4e3x_A Delta-1-pyrroline-5-car 100.0 2.1E-87 7.2E-92 695.4 47.1 431 4-436 96-552 (563)
40 3lns_A Benzaldehyde dehydrogen 100.0 1.1E-85 3.6E-90 671.3 47.5 418 4-434 24-456 (457)
41 3ju8_A Succinylglutamic semial 100.0 9.5E-86 3.2E-90 676.7 47.1 422 4-435 38-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 1.4E-85 4.8E-90 716.7 49.7 430 4-435 564-1010(1026)
43 3haz_A Proline dehydrogenase; 100.0 5.2E-83 1.8E-87 695.0 47.1 425 4-435 546-987 (1001)
44 2y53_A Aldehyde dehydrogenase 100.0 2.9E-83 1E-87 664.7 43.0 414 15-434 59-518 (534)
45 3v4c_A Aldehyde dehydrogenase 100.0 3.5E-80 1.2E-84 640.9 41.5 414 4-431 59-514 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 7.8E-80 2.7E-84 635.7 42.2 413 4-432 26-480 (510)
47 3k9d_A LMO1179 protein, aldehy 100.0 4.7E-75 1.6E-79 593.9 31.3 407 6-436 10-450 (464)
48 1vlu_A Gamma-glutamyl phosphat 100.0 7.7E-76 2.6E-80 598.4 21.9 381 15-435 29-440 (468)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 1E-73 3.4E-78 582.1 29.0 372 15-436 44-436 (463)
50 1o20_A Gamma-glutamyl phosphat 100.0 9E-73 3.1E-77 570.8 28.5 372 15-436 29-423 (427)
51 4ghk_A Gamma-glutamyl phosphat 100.0 1E-72 3.6E-77 573.1 28.1 374 15-436 41-440 (444)
52 3my7_A Alcohol dehydrogenase/a 100.0 2E-71 6.7E-76 565.4 28.2 402 4-436 3-450 (452)
53 4gic_A HDH, histidinol dehydro 98.3 0.0017 5.8E-08 63.2 28.9 339 8-431 19-399 (423)
54 1kae_A HDH, histidinol dehydro 97.7 0.045 1.5E-06 53.4 29.9 261 88-431 113-392 (434)
55 3v42_A Folliculin; tumor suppr 66.8 7 0.00024 34.8 5.0 65 116-188 21-85 (226)
56 3v4g_A Arginine repressor; vib 60.1 27 0.00092 29.8 7.3 38 124-164 115-152 (180)
57 1b93_A Protein (methylglyoxal 56.4 24 0.00081 29.3 6.2 115 100-239 12-135 (152)
58 1s7i_A Hypothetical protein PA 50.8 55 0.0019 25.9 7.4 73 288-366 30-108 (124)
59 1vmd_A MGS, methylglyoxal synt 45.1 27 0.00092 29.7 4.8 115 100-239 28-151 (178)
60 3lap_A Arginine repressor; arg 45.0 82 0.0028 26.5 7.9 37 124-164 110-146 (170)
61 2fiu_A Conserved hypothetical 39.6 1.1E+02 0.0039 22.9 7.3 22 343-364 54-75 (99)
62 2yvq_A Carbamoyl-phosphate syn 29.8 60 0.002 26.3 4.5 63 145-209 60-132 (143)
63 2xw6_A MGS, methylglyoxal synt 25.0 34 0.0012 27.6 2.1 80 118-207 23-110 (134)
64 3iwt_A 178AA long hypothetical 24.2 1.2E+02 0.0039 25.4 5.5 51 139-189 40-93 (178)
65 3pzy_A MOG; ssgcid, seattle st 23.8 91 0.0031 25.8 4.7 49 140-189 28-78 (164)
66 2v9v_A Selenocysteine-specific 22.1 88 0.003 24.5 4.2 80 229-311 36-124 (135)
67 2bon_A Lipid kinase; DAG kinas 21.6 4.2E+02 0.014 24.3 9.5 103 129-235 34-146 (332)
68 2ioj_A Hypothetical protein AF 20.9 78 0.0027 25.2 3.6 43 156-198 53-95 (139)
69 2zfz_A Arginine repressor; DNA 20.0 2E+02 0.007 20.4 5.3 36 125-164 20-55 (79)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.9e-97 Score=757.87 Aligned_cols=435 Identities=42% Similarity=0.712 Sum_probs=413.8
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.+++.+|.++|+++++.|++|+++|++++++|+|||+.++...|+..+++.+++++++
T Consensus 40 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~ 119 (490)
T 2wme_A 40 RASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGL 119 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 467888888875 457899999999999999999999999999999999999986555799999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
++++.+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~ 199 (490)
T 2wme_A 120 VPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPD 199 (490)
T ss_dssp GGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCT
T ss_pred cccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCC
Confidence 98887777666667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++++.+.++.|+.||++|.|.||||+.+|+.+.+.++.+.+||+++|+|||||+||++|||++.|++.+++++|
T Consensus 200 gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~ 279 (490)
T 2wme_A 200 GVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF 279 (490)
T ss_dssp TSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH
T ss_pred CcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh
Confidence 99999999888899999999999999999999999999876665788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+||.|++++|+|||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++.+|+++++||....
T Consensus 280 ~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~ 359 (490)
T 2wme_A 280 FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVT 359 (490)
T ss_dssp GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCC
T ss_pred ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred ----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 316 ----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 316 ----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|
T Consensus 360 ~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v 439 (490)
T 2wme_A 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439 (490)
T ss_dssp TTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEE
T ss_pred cccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEE
Confidence 3689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCC
Q 013526 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS 438 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~ 438 (441)
+||++....+.+||||+|.||+|+++|.+|+++||+.|+|++++.+.
T Consensus 440 ~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~g~~ 486 (490)
T 2wme_A 440 WINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDY 486 (490)
T ss_dssp EESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSCC
T ss_pred EEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEECCCC
Confidence 99998888889999999999999999999999999999999998643
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2.3e-93 Score=735.75 Aligned_cols=436 Identities=38% Similarity=0.684 Sum_probs=410.2
Q ss_pred CCCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 4 ~~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++
T Consensus 66 ~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a 144 (520)
T 3ed6_A 66 EGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNVFMYFA 144 (520)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHH
Confidence 345666665553 567899999999999999999999999999999999999975 569999999999999
Q ss_pred HhhhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 74 GAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
.+++++.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|
T Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaG 224 (520)
T 3ed6_A 145 GLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVG 224 (520)
T ss_dssp HHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhC
Confidence 99887766555443 45677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+||++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++
T Consensus 225 lP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~ 303 (520)
T 3ed6_A 225 FPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALN 303 (520)
T ss_dssp CCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHH
T ss_pred CCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHH
Confidence 9999999999977889999999999999999999999999999988 789999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|++++|||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 304 ~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~ 383 (520)
T 3ed6_A 304 GGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGK 383 (520)
T ss_dssp HHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCS
T ss_pred HHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 313 PIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 313 ~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 384 ~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~a 463 (520)
T 3ed6_A 384 RPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKL 463 (520)
T ss_dssp CCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCC
T ss_pred cCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCc
Confidence 642 4799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCC--CCC
Q 013526 389 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS--PWL 441 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~--~~~ 441 (441)
|+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|++++.+. +|+
T Consensus 464 G~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 464 GTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp SEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEESSCCCCCCS
T ss_pred ceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcCCCCccCcc
Confidence 99999999888889999999999999999999999999999999988643 564
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=2e-93 Score=731.51 Aligned_cols=429 Identities=35% Similarity=0.591 Sum_probs=406.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++.+
T Consensus 46 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~l~~~a~~ 124 (484)
T 3ifg_A 46 KMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEE 124 (484)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 356677777664 56789999999999999999999999999999999999997 567999999999999998
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 125 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP 204 (484)
T 3ifg_A 125 GKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVP 204 (484)
T ss_dssp HTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCC
T ss_pred HHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCC
Confidence 877666555432 4567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 205 ~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 283 (484)
T 3ifg_A 205 KGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASK 283 (484)
T ss_dssp TTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred cccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999877889999999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|++++|+|||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||...
T Consensus 284 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 363 (484)
T 3ifg_A 284 YRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH 363 (484)
T ss_dssp HGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred HhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 364 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN 443 (484)
T 3ifg_A 364 ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGIN 443 (484)
T ss_dssp TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEc
Confidence 55799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+.....+.+||||+|+||+|+++|.+++++||+.|+|++.
T Consensus 444 ~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 444 TGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp CSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred CCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9877788999999999999999999999999999999875
No 4
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.8e-93 Score=729.69 Aligned_cols=429 Identities=26% Similarity=0.428 Sum_probs=407.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 22 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 100 (484)
T 3ros_A 22 NPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSES-KEEVELCVSICNYYADH 100 (484)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777764 567899999999999999999999999999999999999975 47999999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
++++.+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~ 180 (484)
T 3ros_A 101 GPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPE 180 (484)
T ss_dssp HHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCT
T ss_pred HHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCc
Confidence 88876665444456678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++++.+.+. |+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 181 gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~ 258 (484)
T 3ros_A 181 GSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDART 258 (484)
T ss_dssp TSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTT
T ss_pred CeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHh-ccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHh
Confidence 999999997777777 999999999999999999999999988 789999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||...+
T Consensus 259 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~ 338 (484)
T 3ros_A 259 YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEID 338 (484)
T ss_dssp GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998755
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+
T Consensus 339 ~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~ 418 (484)
T 3ros_A 339 SKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVING 418 (484)
T ss_dssp CSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETS
T ss_pred CCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 396 YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+....+.+||||+|+||+|+++|.+++++||+.|+|+++.
T Consensus 419 ~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 419 RWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp CCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred CCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 8778899999999999999999999999999999998875
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=5.5e-93 Score=730.61 Aligned_cols=430 Identities=32% Similarity=0.574 Sum_probs=408.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 45 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~ 123 (506)
T 3rh9_A 45 SMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEA-QGEVDYAAGFFDYCAKH 123 (506)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 467788888875 446899999999999999999999999999999999999975 48999999999999999
Q ss_pred hhhhcCceeccccccccceee-cccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+...+...+...+.++ +|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP 203 (506)
T 3rh9_A 124 ISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLP 203 (506)
T ss_dssp GGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCC
T ss_pred HHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcC
Confidence 988776655544566778889 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++.+.+.+..|+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 204 ~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 282 (506)
T 3rh9_A 204 DGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANK 282 (506)
T ss_dssp TTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred hhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999999988889999999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||...
T Consensus 283 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~ 362 (506)
T 3rh9_A 283 FRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPA 362 (506)
T ss_dssp HGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGG
T ss_pred HHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CC-CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 315 GK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 315 ~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 363 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~v 442 (506)
T 3rh9_A 363 ELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGW 442 (506)
T ss_dssp GCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEE
T ss_pred CCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEE
Confidence 43 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|++....+.+||||+|+||+|+++|++++++||+.|+|+++.
T Consensus 443 N~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 443 NTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp SCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred cCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999888889999999999999999999999999999998864
No 6
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.1e-93 Score=732.53 Aligned_cols=435 Identities=40% Similarity=0.680 Sum_probs=410.8
Q ss_pred CCHHHHHHHHH----------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLIT----------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~~----------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++
T Consensus 58 ~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~ 136 (528)
T 3u4j_A 58 ASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAG 136 (528)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHH
Confidence 45666665553 567899999999999999999999999999999999999985 7899999999999999
Q ss_pred hhhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 75 AADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 75 ~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
.+++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGl 216 (528)
T 3u4j_A 137 QARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216 (528)
T ss_dssp HHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTC
T ss_pred HHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCC
Confidence 9888766655544 456789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|+||++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.++++
T Consensus 217 P~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~ 295 (528)
T 3u4j_A 217 PDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYG 295 (528)
T ss_dssp CTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHH
T ss_pred CCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHH
Confidence 999999999987889999999999999999999999999999988 8899999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|.|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||..
T Consensus 296 ~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~ 375 (528)
T 3u4j_A 296 VYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGER 375 (528)
T ss_dssp HHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSE
T ss_pred HhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC-CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 314 IGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 314 ~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 376 ~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~ 455 (528)
T 3u4j_A 376 IGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455 (528)
T ss_dssp ECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred CCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEE
Confidence 543 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC-CCCCC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF-NSPWL 441 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~-~~~~~ 441 (441)
||++....+.+||||+|+||+|+++|.+++++||+.|+|+++.. -.+|+
T Consensus 456 vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~ 505 (528)
T 3u4j_A 456 INSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLGRPAPWF 505 (528)
T ss_dssp ESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESSCCCCSC
T ss_pred ECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCCCCCCcc
Confidence 99998888999999999999999999999999999999998875 44564
No 7
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.7e-92 Score=726.87 Aligned_cols=433 Identities=52% Similarity=0.906 Sum_probs=407.0
Q ss_pred CCCHHHHHHHH-----------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLI-----------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 72 (441)
Q Consensus 4 ~~~~~~~~~a~-----------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~ 72 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++
T Consensus 54 ~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~ 133 (501)
T 1bxs_A 54 EGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYC 133 (501)
T ss_dssp CCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 34566666655 3667899999999999999999999999999999999999976678999999999999
Q ss_pred HHhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 73 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
++.++++.+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|
T Consensus 134 a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aG 213 (501)
T 1bxs_A 134 AGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAG 213 (501)
T ss_dssp HHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhC
Confidence 99988776654443345567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|++|++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.+++++++|+++|+|||||+||++|||++.|++.+++
T Consensus 214 lP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~ 293 (501)
T 1bxs_A 214 FPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQ 293 (501)
T ss_dssp CCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHH
T ss_pred CCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHH
Confidence 99999999999777889999999999999999999999999998775688999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|.|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 294 ~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~ 373 (501)
T 1bxs_A 294 GVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 373 (501)
T ss_dssp HHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCS
T ss_pred HHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
.....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 374 ~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 453 (501)
T 1bxs_A 374 PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW 453 (501)
T ss_dssp EECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred cCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEE
Confidence 64346999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
||++....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 454 iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 454 VNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp ESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred ECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccC
Confidence 99987777899999999999999999999999999999988764
No 8
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1e-92 Score=729.97 Aligned_cols=436 Identities=43% Similarity=0.728 Sum_probs=407.5
Q ss_pred CCCHHHHHHHH-------------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHH
Q 013526 4 LPSRQHVRRLI-------------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 70 (441)
Q Consensus 4 ~~~~~~~~~a~-------------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~ 70 (441)
..+.+++++|+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.++
T Consensus 41 ~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e-a~~ev~~~~~~~~ 119 (503)
T 3iwj_A 41 AATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE-AAWDIDDVAGCFE 119 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHH
Confidence 34666666655 366789999999999999999999999999999999999997 4679999999999
Q ss_pred HHHHhhhhhcCce-ecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHH
Q 013526 71 YYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 146 (441)
Q Consensus 71 ~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~ 146 (441)
+++.+++++.+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++
T Consensus 120 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 199 (503)
T 3iwj_A 120 YYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGE 199 (503)
T ss_dssp HHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHH
T ss_pred HHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHH
Confidence 9999887765432 111 134567899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHH
Q 013526 147 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 226 (441)
Q Consensus 147 ~l~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~a 226 (441)
++.++|+|+|+||++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|
T Consensus 200 l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~A 278 (503)
T 3iwj_A 200 ICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKA 278 (503)
T ss_dssp HHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHH
T ss_pred HHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHH
Confidence 9999999999999999987788999999999999999999999999999987 789999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCe
Q 013526 227 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 306 (441)
Q Consensus 227 a~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~ 306 (441)
++.+++++|.|+||.|+++++||||+++|++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|++
T Consensus 279 a~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 358 (503)
T 3iwj_A 279 AEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGAT 358 (503)
T ss_dssp HHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCcCC--CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHH
Q 013526 307 LLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 384 (441)
Q Consensus 307 v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~ 384 (441)
+++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 359 v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 438 (503)
T 3iwj_A 359 ILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTK 438 (503)
T ss_dssp EEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHH
T ss_pred EEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHH
Confidence 999998654 579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCC--CCCC
Q 013526 385 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN--SPWL 441 (441)
Q Consensus 385 ~l~~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~--~~~~ 441 (441)
++++|+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|+++... .+|+
T Consensus 439 ~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 439 AFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp HCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEECCSSCCCCS
T ss_pred hCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeCCCCccccc
Confidence 99999999999877788999999999999999999999999999999987653 3454
No 9
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=9e-93 Score=728.39 Aligned_cols=430 Identities=33% Similarity=0.593 Sum_probs=408.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++++
T Consensus 58 ~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~ 137 (498)
T 4f3x_A 58 EASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGA 137 (498)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 456777777764 668899999999999999999999999999999999999985478999999999999999
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
++++.+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++ +|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP 216 (498)
T 4f3x_A 138 VRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LP 216 (498)
T ss_dssp TTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SC
T ss_pred HHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CC
Confidence 88776654433 24667889999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||++|||++.|++.+++++
T Consensus 217 ~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~ 295 (498)
T 4f3x_A 217 EGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFG 295 (498)
T ss_dssp TTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHT
T ss_pred cCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHH
Confidence 99999999988889999999999999999999999999999988 88999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCC-eEecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga-~v~~gg~~ 313 (441)
|.|+||.|++++|||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+ ++++||..
T Consensus 296 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~ 375 (498)
T 4f3x_A 296 YYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRT 375 (498)
T ss_dssp TGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSB
T ss_pred HhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999987
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
.+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 376 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~v 455 (498)
T 4f3x_A 376 GSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWI 455 (498)
T ss_dssp CCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEE
T ss_pred CCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 55689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|++....+.+||||+|+||+|+++|.+++++||+.|+|++++
T Consensus 456 N~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 456 NTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp SCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 999887899999999999999999999999999999998865
No 10
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=7.9e-93 Score=729.16 Aligned_cols=429 Identities=39% Similarity=0.650 Sum_probs=406.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++.+
T Consensus 66 ~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e-a~~ev~~~~~~~~~~a~~ 144 (504)
T 3ek1_A 66 SLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEE 144 (504)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 456777777774 55789999999999999999999999999999999999997 456999999999999999
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 145 ~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP 224 (504)
T 3ek1_A 145 AKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIP 224 (504)
T ss_dssp HTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCC
T ss_pred HHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCC
Confidence 877666554432 3567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 225 ~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~ 303 (504)
T 3ek1_A 225 AGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSK 303 (504)
T ss_dssp TTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHH
T ss_pred cccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh-hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHH
Confidence 99999999878889999999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||..
T Consensus 304 f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~- 382 (504)
T 3ek1_A 304 YRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE- 382 (504)
T ss_dssp HGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-
T ss_pred HhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 383 -~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN 461 (504)
T 3ek1_A 383 -LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHN 461 (504)
T ss_dssp -EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEES
T ss_pred -CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEEC
Confidence 3789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+.....+.+||||+|+||+|+++|.+++++||+.|+|++++.
T Consensus 462 ~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 462 TGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp CSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred CCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 987778899999999999999999999999999999988754
No 11
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.6e-92 Score=726.88 Aligned_cols=432 Identities=50% Similarity=0.841 Sum_probs=405.9
Q ss_pred CCHHHHHHHH-----------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLI-----------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 73 (441)
Q Consensus 5 ~~~~~~~~a~-----------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 73 (441)
.+.+++++|+ .|+.++..+|.++|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++
T Consensus 54 ~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a 133 (500)
T 1o04_A 54 GDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYA 133 (500)
T ss_dssp BCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4556666655 36668999999999999999999999999999999999999766689999999999999
Q ss_pred HhhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 74 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+.++++.+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+
T Consensus 134 ~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGl 213 (500)
T 1o04_A 134 GWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGF 213 (500)
T ss_dssp HHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTC
T ss_pred HHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCC
Confidence 98877766544433445678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 233 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~ 233 (441)
|+|++|++++.+.+.+..|+.||++|.|.||||+.+|+.|++.+++++++|+++|+|||||+||++|||++.|++.++++
T Consensus 214 P~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 293 (500)
T 1o04_A 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 293 (500)
T ss_dssp CTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHH
T ss_pred CcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHH
Confidence 99999999997778899999999999999999999999999988757889999999999999999999999999999999
Q ss_pred HhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 234 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 234 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
+|.|+||.|+++++||||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++||..
T Consensus 294 ~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~ 373 (500)
T 1o04_A 294 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373 (500)
T ss_dssp HHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSB
T ss_pred HhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 374 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~i 453 (500)
T 1o04_A 374 AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWV 453 (500)
T ss_dssp CCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEE
T ss_pred CCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEE
Confidence 53469999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|++....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 454 N~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 454 NCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp SCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred CCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 9988777899999999999999999999999999999988754
No 12
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=2.2e-92 Score=728.00 Aligned_cols=431 Identities=41% Similarity=0.754 Sum_probs=403.5
Q ss_pred CCHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 5 PSRQHVRRLI----------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 5 ~~~~~~~~a~----------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.+.+++++|+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++
T Consensus 71 a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~ 150 (517)
T 2o2p_A 71 AQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAG 150 (517)
T ss_dssp CCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666554 377889999999999999999999999999999999999997544799999999999999
Q ss_pred hhhhhcCceeccc----cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH
Q 013526 75 AADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150 (441)
Q Consensus 75 ~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ 150 (441)
+++++.+..++.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.+
T Consensus 151 ~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~e 230 (517)
T 2o2p_A 151 WCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLK 230 (517)
T ss_dssp HGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHH
Confidence 9887766554432 223568999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|++|++++.+.+.+..|+.||++|.|.||||+.+|+.|.+.++.++++|+++|+|||||+||++|||++.|++.+
T Consensus 231 aGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i 310 (517)
T 2o2p_A 231 AGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMG 310 (517)
T ss_dssp TTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred hCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHH
Confidence 99999999999997778899999999999999999999999999987635789999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|++++|||||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 311 ~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~g 390 (517)
T 2o2p_A 311 MSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCG 390 (517)
T ss_dssp HHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
|......|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++|+++|||++||||+|.++++++++++++
T Consensus 391 G~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~a 470 (517)
T 2o2p_A 391 GNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470 (517)
T ss_dssp CSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCS
T ss_pred cccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCE
Confidence 986544699999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|++++
T Consensus 471 G~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~~ 517 (517)
T 2o2p_A 471 GTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFEY 517 (517)
T ss_dssp SEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEeeC
Confidence 99999998777789999999999999999999999999999998753
No 13
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=4.7e-92 Score=724.49 Aligned_cols=432 Identities=38% Similarity=0.687 Sum_probs=406.8
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++++
T Consensus 54 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 132 (503)
T 1a4s_A 54 PCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGL 132 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 45667777766 3668899999999999999999999999999999999999975 67999999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 133 ~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~ 212 (503)
T 1a4s_A 133 APTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPV 212 (503)
T ss_dssp GGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCT
T ss_pred HHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCc
Confidence 88776654443334567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++.+ +.+..|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 213 gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~ 290 (503)
T 1a4s_A 213 GLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF 290 (503)
T ss_dssp TSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC
T ss_pred CeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH
Confidence 9999999977 88999999999999999999999999999988 789999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC-
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI- 314 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~- 314 (441)
.|+||.|++++++|||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++||...
T Consensus 291 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~ 370 (503)
T 1a4s_A 291 LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLT 370 (503)
T ss_dssp GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCC
T ss_pred hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred -C----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 315 -G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 315 -~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 371 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 450 (503)
T 1a4s_A 371 PSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAG 450 (503)
T ss_dssp CSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSS
T ss_pred cccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCcee
Confidence 2 36899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCC
Q 013526 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS 438 (441)
Q Consensus 390 ~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~ 438 (441)
+|+||++....+.+||||+|+||+|+++|.+++++||+.|+|++++.+.
T Consensus 451 ~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~~~ 499 (503)
T 1a4s_A 451 TCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDV 499 (503)
T ss_dssp EEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCSCC
T ss_pred EEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEccCCC
Confidence 9999998877788999999999999999999999999999999876553
No 14
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=5.7e-92 Score=723.47 Aligned_cols=431 Identities=33% Similarity=0.556 Sum_probs=405.9
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 46 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~ 124 (497)
T 3k2w_A 46 AGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVA-EMEVDVTATFIDYGCDN 124 (497)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777764 567899999999999999999999999999999999999975 57999999999999999
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
++++.+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP 204 (497)
T 3k2w_A 125 ALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLP 204 (497)
T ss_dssp TTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCC
T ss_pred HHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcC
Confidence 88776655443 24567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 205 ~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 283 (497)
T 3k2w_A 205 DGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGR 283 (497)
T ss_dssp TTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHH
T ss_pred cCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHH
Confidence 99999999977789999999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc-
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP- 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~- 313 (441)
|.|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||..
T Consensus 284 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 363 (497)
T 3k2w_A 284 FANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTA 363 (497)
T ss_dssp HGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC--
T ss_pred HhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999973
Q ss_pred -CCC--CCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 314 -IGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 314 -~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 364 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 443 (497)
T 3k2w_A 364 TVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGE 443 (497)
T ss_dssp -------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSE
T ss_pred CccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeE
Confidence 222 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 391 IWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 391 v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+||++....+.+||||+|+||+|+++|.+++++||+.|+|++++.
T Consensus 444 v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~ 489 (497)
T 3k2w_A 444 VYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEA 489 (497)
T ss_dssp EEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEECC
T ss_pred EEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEcc
Confidence 9999998888999999999999999999999999999999998764
No 15
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.7e-91 Score=720.88 Aligned_cols=430 Identities=40% Similarity=0.659 Sum_probs=405.1
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++++
T Consensus 60 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~ 138 (515)
T 2d4e_A 60 RGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEY 138 (515)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 356677777663 5678999999999999999999999999999999999999754 8999999999999998
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+..++. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP 218 (515)
T 2d4e_A 139 AEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLP 218 (515)
T ss_dssp GGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCC
T ss_pred HHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCC
Confidence 88876665544 23456788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 219 ~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~ 297 (515)
T 2d4e_A 219 PGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQI 297 (515)
T ss_dssp TTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred cCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh-hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHH
Confidence 99999999977788999999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||...
T Consensus 298 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~ 377 (515)
T 2d4e_A 298 FSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERA 377 (515)
T ss_dssp HGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred HhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred C--------CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc
Q 013526 315 G--------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386 (441)
Q Consensus 315 ~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l 386 (441)
. ..|+|++|||+.+ +++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++
T Consensus 378 ~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 456 (515)
T 2d4e_A 378 KTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALEL 456 (515)
T ss_dssp CBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHS
T ss_pred cccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhC
Confidence 3 2699999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 387 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 387 ~~g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
++|+|+||++....+.+||||+|+||+|+++|.+++++||+.|+|++++.
T Consensus 457 ~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 457 EAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPLR 506 (515)
T ss_dssp CSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEESS
T ss_pred CeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcCC
Confidence 99999999987777899999999999999999999999999999998764
No 16
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.3e-92 Score=721.35 Aligned_cols=418 Identities=39% Similarity=0.658 Sum_probs=398.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCceecccccccccee
Q 013526 16 VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL 95 (441)
Q Consensus 16 ~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (441)
|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.++++.+..++.+.+...+.+
T Consensus 64 w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~ 143 (495)
T 3b4w_A 64 WPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVS 143 (495)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEE
Confidence 67789999999999999999999999999999999999997544799999999999999988877765544334467899
Q ss_pred ecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhC
Q 013526 96 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH 175 (441)
Q Consensus 96 ~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~~ 175 (441)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|++++ +.+.+..|+.|
T Consensus 144 ~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~ 222 (495)
T 3b4w_A 144 REPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSN 222 (495)
T ss_dssp EEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTC
T ss_pred EccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 88899999999
Q ss_pred CCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCccH
Q 013526 176 MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 255 (441)
Q Consensus 176 ~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~~ 255 (441)
|++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++|
T Consensus 223 ~~v~~I~FTGS~~~G~~i~~~aa-~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 301 (495)
T 3b4w_A 223 PDIDMFTFTGSSAVGREVGRRAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301 (495)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGH
T ss_pred CCcCEEEEeCCHHHHHHHHHHhh-hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHH
Confidence 99999999999999999999988 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC--CCCceeecEEEeeCCCCc
Q 013526 256 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDM 333 (441)
Q Consensus 256 ~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~ 333 (441)
++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|
T Consensus 302 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~ 381 (495)
T 3b4w_A 302 DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKM 381 (495)
T ss_dssp HHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998643 368999999999999999
Q ss_pred cccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcCCCCCCCCccCCCCCCC
Q 013526 334 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGF 413 (441)
Q Consensus 334 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~p~GG~~~SG~ 413 (441)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++ ..+.+||||+|.||+
T Consensus 382 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~ 460 (495)
T 3b4w_A 382 TIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGI 460 (495)
T ss_dssp HHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEE
T ss_pred hhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999987 778999999999999
Q ss_pred CCcchHHHHHhhhhccEEEEeCC
Q 013526 414 GRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 414 g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+++|.+++++||+.|+|++++.
T Consensus 461 Gr~~G~~gl~~~~~~k~v~~~~~ 483 (495)
T 3b4w_A 461 GRENGPEGVEHFTQQKSVLLPMG 483 (495)
T ss_dssp SCBSHHHHHHTTEEEEEEECCTT
T ss_pred CccchHHHHHHhcceeEEEEccC
Confidence 99999999999999999988753
No 17
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=2.2e-91 Score=717.44 Aligned_cols=429 Identities=37% Similarity=0.627 Sum_probs=405.5
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.+++++..
T Consensus 43 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~a~~ 121 (481)
T 3jz4_A 43 KMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEE 121 (481)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 356677776664 56789999999999999999999999999999999999997 467999999999999988
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
..+..+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP 201 (481)
T 3jz4_A 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVP 201 (481)
T ss_dssp GGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCC
T ss_pred HHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcC
Confidence 776655544432 4567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 202 ~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 280 (481)
T 3jz4_A 202 AGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASK 280 (481)
T ss_dssp TTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 99999999987889999999999999999999999999999987 88999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|+|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||...
T Consensus 281 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~ 360 (481)
T 3jz4_A 281 FRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 360 (481)
T ss_dssp HGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred HHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEc
Q 013526 315 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 394 (441)
Q Consensus 315 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN 394 (441)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||
T Consensus 361 ~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN 440 (481)
T 3jz4_A 361 ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGIN 440 (481)
T ss_dssp TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEEC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 395 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 395 ~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
++....+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 441 ~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 441 TGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp CSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9888888999999999999999999999999999999875
No 18
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.7e-92 Score=726.28 Aligned_cols=431 Identities=39% Similarity=0.674 Sum_probs=404.3
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ |+..+++.+++++.+
T Consensus 48 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~ 124 (517)
T 3r31_A 48 AATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFF 124 (517)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHH
Confidence 456777777764 557899999999999999999999999999999999999975 999999999999998
Q ss_pred hhh----hcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc
Q 013526 76 ADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 151 (441)
Q Consensus 76 ~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a 151 (441)
+++ ..+...+...+. .+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 125 ~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~ea 203 (517)
T 3r31_A 125 GGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEA 203 (517)
T ss_dssp HHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHT
T ss_pred hhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHh
Confidence 877 666655544455 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+|++|++++ +.+.++.|+.||++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.++
T Consensus 204 GlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~ 281 (517)
T 3r31_A 204 GLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAM 281 (517)
T ss_dssp TCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred CcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHH
Confidence 999999999999 7789999999999999999999999999999988 78999999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|.|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||
T Consensus 282 ~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG 361 (517)
T 3r31_A 282 LGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG 361 (517)
T ss_dssp HHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC
T ss_pred HHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCC---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 312 KPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 312 ~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
.... +.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 362 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~a 441 (517)
T 3r31_A 362 GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEA 441 (517)
T ss_dssp SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCC
T ss_pred ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCc
Confidence 3121 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC--CCCC
Q 013526 389 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF--NSPW 440 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~--~~~~ 440 (441)
|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|+++.. ..||
T Consensus 442 G~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~ 495 (517)
T 3r31_A 442 GTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPY 495 (517)
T ss_dssp SEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC------
T ss_pred ceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCCCCCCCc
Confidence 999999988888999999999999999999999999999999998764 3444
No 19
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.4e-91 Score=720.77 Aligned_cols=425 Identities=32% Similarity=0.513 Sum_probs=400.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 45 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~ 123 (505)
T 3prl_A 45 ALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADE 123 (505)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777664 668899999999999999999999999999999999999975 56999999999999999
Q ss_pred hhhhcCceeccc--c----ccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMS--R----ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 76 ~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
++++.+...+.. . +...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.
T Consensus 124 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~ 203 (505)
T 3prl_A 124 ALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALA 203 (505)
T ss_dssp HHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHH
T ss_pred HHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 887766544432 1 3456889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+|++|++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.
T Consensus 204 eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~ 280 (505)
T 3prl_A 204 DAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQ 280 (505)
T ss_dssp HTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHH
T ss_pred HhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHH
Confidence 9999999999999977889999999999999999999999999999864 8999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|++++++|||++++++|+++|+++++++++|+|. +++++||++++.+++++++++++++++|+++++
T Consensus 281 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~ 359 (505)
T 3prl_A 281 IVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLS 359 (505)
T ss_dssp HHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 360 gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 436 (505)
T 3prl_A 360 GNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVG 436 (505)
T ss_dssp CCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSS
T ss_pred cCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCee
Confidence 9974 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 390 IIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 390 ~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+|+||++.. ..+.+||||+|+||+|+++|.+++++||+.|+|++++.
T Consensus 437 ~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~~ 484 (505)
T 3prl_A 437 TVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLA 484 (505)
T ss_dssp EEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred EEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeCC
Confidence 999999876 56889999999999999999999999999999998764
No 20
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.3e-91 Score=717.37 Aligned_cols=434 Identities=42% Similarity=0.713 Sum_probs=410.1
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++++
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 119 (490)
T 2ve5_A 40 RASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGL 119 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 456677776664 667899999999999999999999999999999999999985445999999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~ 199 (490)
T 2ve5_A 120 VPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPD 199 (490)
T ss_dssp GGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCT
T ss_pred HHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCc
Confidence 88776665554456778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHH-hhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~-a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
|+|+++++.+.+.++.|+.||++|.|.||||+.+++.|.+.+ + ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 200 gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 278 (490)
T 2ve5_A 200 GVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASS-SSLKEVTMELGGKSPLIIFPDADLDRAADIAVMAN 278 (490)
T ss_dssp TSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-HHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred CeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchh-ccccceEEEcCCCceeEECCCCCHHHHHHHHHHHH
Confidence 999999997788999999999999999999999999999998 6 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
|.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||...
T Consensus 279 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~ 358 (490)
T 2ve5_A 279 FFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358 (490)
T ss_dssp HGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC
T ss_pred HhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred C----CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 315 G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 315 ~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
. ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.
T Consensus 359 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 438 (490)
T 2ve5_A 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGI 438 (490)
T ss_dssp CTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSE
T ss_pred ccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcce
Confidence 2 368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCC
Q 013526 391 IWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS 438 (441)
Q Consensus 391 v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~ 438 (441)
|+||++....+.+||||+|.||+|+++|.+++++||+.|+|+++.++.
T Consensus 439 v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~~~~ 486 (490)
T 2ve5_A 439 CWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDY 486 (490)
T ss_dssp EEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSCC
T ss_pred EEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEccCcC
Confidence 999998888899999999999999999999999999999999987643
No 21
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=2.9e-91 Score=716.72 Aligned_cols=428 Identities=36% Similarity=0.606 Sum_probs=401.8
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 56 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~ 135 (495)
T 1wnd_A 56 EASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGA 135 (495)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666676665 3667899999999999999999999999999999999999975434999999999999998
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++ +|
T Consensus 136 ~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP 214 (495)
T 1wnd_A 136 ARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FP 214 (495)
T ss_dssp TTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SC
T ss_pred HHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CC
Confidence 877765544432 3446688999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|++|++++.+.+.+..|+.||++|.|.||||+.+++.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 215 ~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~ 293 (495)
T 1wnd_A 215 AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFG 293 (495)
T ss_dssp TTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHT
T ss_pred cCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHH
Confidence 99999999977788999999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcC-CeEecCCC-
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK- 312 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~- 312 (441)
|.|+||.|++++++|||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++| +++++||.
T Consensus 294 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~ 373 (495)
T 1wnd_A 294 YYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK 373 (495)
T ss_dssp TGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB
T ss_pred HhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 99999997
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 374 ~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 452 (495)
T 1wnd_A 374 RKG-NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW 452 (495)
T ss_dssp CSS-SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred cCC-CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEE
Confidence 532 6899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
||++....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 453 iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 453 VNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp ESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred ECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 999877778999999999999999999999999999999875
No 22
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=2.7e-91 Score=723.11 Aligned_cols=430 Identities=33% Similarity=0.530 Sum_probs=403.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 70 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~ 148 (538)
T 3qan_A 70 KANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQ 148 (538)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356777777764 668899999999999999999999999999999999999975 56999999999999998
Q ss_pred -hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 -ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 -~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.+...+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP 228 (538)
T 3qan_A 149 MIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLP 228 (538)
T ss_dssp HHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCC
T ss_pred HHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCC
Confidence 4555565555444677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcC------CCceeeecCCCCceeecCCCCHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN------LKPVSLELGGKSPLLIFDDVDVNTAAD 228 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~------~~~~~~e~gg~~~~iV~~dad~~~aa~ 228 (441)
+|++|++++.+.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+ ++|+++|+|||||+||++|||++.|++
T Consensus 229 ~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~ 307 (538)
T 3qan_A 229 KGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAE 307 (538)
T ss_dssp TTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHH
T ss_pred CCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh-hccccccccccEEEecCCCCceEECCCCCHHHHHH
Confidence 99999999977788999999999999999999999999999987 66 899999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEe
Q 013526 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 308 (441)
.+++++|.|+||.|+++++||||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++.+| +++
T Consensus 308 ~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~ 386 (538)
T 3qan_A 308 SILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLM 386 (538)
T ss_dssp HHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEE
T ss_pred HHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
+||......|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++
T Consensus 387 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~a 466 (538)
T 3qan_A 387 TGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHV 466 (538)
T ss_dssp ECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCe
Confidence 99987544799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEc-CcCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeCC
Q 013526 389 GIIWIN-CYFAF-DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 389 g~v~vN-~~~~~-~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+|+|| ++... .+.+||||+|.||+| +++|.+++++||+.|+|+++..
T Consensus 467 G~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~~ 517 (538)
T 3qan_A 467 GNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMYA 517 (538)
T ss_dssp SEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC-
T ss_pred eEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEecC
Confidence 999999 44443 789999999999999 9999999999999999998764
No 23
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=4e-91 Score=715.22 Aligned_cols=429 Identities=33% Similarity=0.561 Sum_probs=403.7
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~ 118 (479)
T 2imp_A 40 DGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEW 118 (479)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677777663 567899999999999999999999999999999999999975 57999999999999998
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP 198 (479)
T 2imp_A 119 ARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLP 198 (479)
T ss_dssp TTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCC
T ss_pred HHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCC
Confidence 877666554432 3446789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+++++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 199 ~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~ 277 (479)
T 2imp_A 199 RGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSR 277 (479)
T ss_dssp TTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTS
T ss_pred cCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999977778999999999999999999999999999988 88999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCC-CCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
|.|+||.|+++++||||+++|++|+++|+++++++++|+|.| +++++||++++.+++++++++++++++|+++++||..
T Consensus 278 ~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~ 357 (479)
T 2imp_A 278 VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKA 357 (479)
T ss_dssp STTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred hhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999999999976
Q ss_pred CCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 314 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 314 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
.+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 358 ~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~i 437 (479)
T 2imp_A 358 VEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYI 437 (479)
T ss_dssp CCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEE
T ss_pred cCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEE
Confidence 43468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 394 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 394 N~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
|++....+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 438 N~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 438 NRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp SSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 99887778999999999999999999999999999999764
No 24
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=8.7e-91 Score=713.48 Aligned_cols=425 Identities=34% Similarity=0.569 Sum_probs=396.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 59 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~ 138 (497)
T 3i44_A 59 LGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKA 138 (497)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777764 667899999999999999999999999999999999999985448999999999999887
Q ss_pred hhhhcCceecccccccccee-ecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.......... ..+...++. ++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 139 ~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP 217 (497)
T 3i44_A 139 YKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALP 217 (497)
T ss_dssp HHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCC
T ss_pred hhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcC
Confidence 6554322111 124557788 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ +++||+++|+|||||+||++||| +.|++.+++++
T Consensus 218 ~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~ 295 (497)
T 3i44_A 218 SGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHC 295 (497)
T ss_dssp TTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHH
T ss_pred CCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHH
Confidence 99999999988889999999999999999999999999999988 88999999999999999999999 99999999999
Q ss_pred hhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC-c
Q 013526 235 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-P 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~ 313 (441)
|+|+||.|++++|||||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||. .
T Consensus 296 f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 375 (497)
T 3i44_A 296 FYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGL 375 (497)
T ss_dssp HGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred HhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999994 3
Q ss_pred CC--CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 314 IG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 314 ~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|
T Consensus 376 ~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V 455 (497)
T 3i44_A 376 PMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMV 455 (497)
T ss_dssp CTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEE
T ss_pred CCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeE
Confidence 22 2799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEE
Q 013526 392 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 432 (441)
Q Consensus 392 ~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~ 432 (441)
+||+ ....+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 456 ~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 456 EVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp EETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred EECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 9995 456688999999999999999999999999999875
No 25
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.9e-91 Score=717.02 Aligned_cols=430 Identities=30% Similarity=0.445 Sum_probs=402.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.+
T Consensus 60 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~ 138 (521)
T 4e4g_A 60 LASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGI 138 (521)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHH-HHHHHHHHHHHHHHHTH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777764 567899999999999999999999999999999999999974 67999999999999987
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
.+...+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP 218 (521)
T 4e4g_A 139 PHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLP 218 (521)
T ss_dssp HHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCC
T ss_pred HHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCC
Confidence 77665554332 24566889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
+|+||++++ +.+.+..|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 219 ~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~ 296 (521)
T 4e4g_A 219 AGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAG 296 (521)
T ss_dssp TTSEEECCC-CHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHH
T ss_pred cCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 999999999 4566799999999999999999999999999988 78999999999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCc
Q 013526 235 LFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 313 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 313 (441)
|.|+||.|++++++|||++ +|++|+++|+++++++++|+|.|+++++||++++.++++++++|++++.+|+++++||..
T Consensus 297 f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~ 376 (521)
T 4e4g_A 297 YGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRD 376 (521)
T ss_dssp HGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSS
T ss_pred HhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcc
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999975
Q ss_pred C----CCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 314 I----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 314 ~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
. ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|
T Consensus 377 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG 456 (521)
T 4e4g_A 377 FKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIG 456 (521)
T ss_dssp CCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCS
T ss_pred cCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCee
Confidence 3 247999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhccEEEEeCC
Q 013526 390 IIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 390 ~v~vN~~~~~-~~~~p~GG~~~SG~g--~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
.|+||++... .+.+||||+|.||+| +++|.+++++||+.|+|++++.
T Consensus 457 ~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 457 MVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp EEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECCC
T ss_pred eEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEecC
Confidence 9999998654 478999999999999 7899999999999999998764
No 26
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2.3e-90 Score=707.51 Aligned_cols=429 Identities=29% Similarity=0.449 Sum_probs=404.9
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|+++++.|+|||..++ ..|+..+++.++++++.
T Consensus 25 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~ 103 (462)
T 3etf_A 25 WANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEH 103 (462)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHh
Confidence 456777777764 567899999999999999999999999999999999999974 57999999999999998
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.+++.+.......+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++.+|.+++.++|+|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~ 183 (462)
T 3etf_A 104 GPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPA 183 (462)
T ss_dssp HHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCB
T ss_pred HHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCc
Confidence 87766554222245678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++ +.+.+..|+.||+++.|.||||+.+|+.|.+.++ .+.+|+++|+|||||+||++|||++.|++.+++++|
T Consensus 184 gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 261 (462)
T 3etf_A 184 GVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRY 261 (462)
T ss_dssp TTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHh-ccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHH
Confidence 99999998 5677889999999999999999999999999988 788999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...+
T Consensus 262 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~ 341 (462)
T 3etf_A 262 QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIA 341 (462)
T ss_dssp GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCS
T ss_pred hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998665
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+
T Consensus 342 ~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~ 421 (462)
T 3etf_A 342 GEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFING 421 (462)
T ss_dssp SSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESS
T ss_pred CCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 396 YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+....+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 422 ~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 422 YSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp CCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 8888889999999999999999999999999999998764
No 27
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.4e-90 Score=710.03 Aligned_cols=423 Identities=31% Similarity=0.531 Sum_probs=399.3
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 30 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~ 108 (486)
T 3pqa_A 30 ALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFY 108 (486)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 467778877774 557899999999999999999999999999999999999975 57999999999999999
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc----
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA---- 151 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a---- 151 (441)
++++.+...+.. +...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++
T Consensus 109 ~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~ 187 (486)
T 3pqa_A 109 VKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKY 187 (486)
T ss_dssp HHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhc
Confidence 888766555433 567889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+|+++++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.++
T Consensus 188 GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~ 264 (486)
T 3pqa_A 188 NVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALI 264 (486)
T ss_dssp TCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred CCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHH
Confidence 99999999999977788999999999999999999999999998864 899999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|+|+||.|+++++||||+++|++|+++|+++++++++|+|.|+++++||++++.+++++++++++++.+|+++++||
T Consensus 265 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG 344 (486)
T 3pqa_A 265 KGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGG 344 (486)
T ss_dssp HHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 312 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 312 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
.. .|+|++|||+ +++++|++++||+||||++|++|+| +|||+++|+++|||++||||+|.++++++++++++|+|
T Consensus 345 ~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v 419 (486)
T 3pqa_A 345 KR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGV 419 (486)
T ss_dssp CE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEE
T ss_pred CC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceE
Confidence 75 6899999999 9999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred EEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 392 WINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 392 ~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+||+++.+ .+.+||||+|+||+|+++|.+++++||+.|+|+++..
T Consensus 420 ~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 420 VINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp EESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred EEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 99998763 3589999999999999999999999999999988753
No 28
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=7.8e-91 Score=713.36 Aligned_cols=428 Identities=36% Similarity=0.592 Sum_probs=403.1
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++++
T Consensus 44 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 122 (487)
T 2w8n_A 44 DCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEA-HGEILYSAFFLEWFSEE 122 (487)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 35666777665 3668899999999999999999999999999999999999975 56999999999999998
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
+++..+...+. ..+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+|
T Consensus 123 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP 202 (487)
T 2w8n_A 123 ARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIP 202 (487)
T ss_dssp GGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCC
T ss_pred HHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCC
Confidence 88766665443 23556788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEe---CCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 155 DGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 155 ~~~v~~~~---~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
+|++|+++ +.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.++
T Consensus 203 ~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~ 281 (487)
T 2w8n_A 203 SGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAM 281 (487)
T ss_dssp TTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHH
T ss_pred CCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHH
Confidence 99999999 766778999999999999999999999999999988 88999999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhc-cccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
+++|.|+||.|+++++||||+++|++|+++|++.+++ +++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 282 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~g 361 (487)
T 2w8n_A 282 ASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTG 361 (487)
T ss_dssp HHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCc-eeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 311 GKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 311 g~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
|.... .|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus 362 g~~~~-~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG 440 (487)
T 2w8n_A 362 GKRHQ-LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVG 440 (487)
T ss_dssp CSBCT-TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSS
T ss_pred CccCC-CCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCee
Confidence 98643 688 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 390 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 390 ~v~vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
+|+||++....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 441 ~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 441 MVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp EEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred eEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 999999888778899999999999999999999999999999875
No 29
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.9e-90 Score=712.33 Aligned_cols=428 Identities=30% Similarity=0.480 Sum_probs=401.0
Q ss_pred CCHHHHHHHH---------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 5 PSRQHVRRLI---------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 5 ~~~~~~~~a~---------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.+.+++++|+ .|+.++.++|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++++
T Consensus 51 ~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~ 129 (501)
T 1uxt_A 51 PSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELD 129 (501)
T ss_dssp CCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHTGGGG
T ss_pred CCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 4556666554 4778999999999999999999999999999999999999975 47999999999999998
Q ss_pred hhhhcCceeccc---c--ccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMS---R--ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 150 (441)
Q Consensus 76 ~~~~~~~~~~~~---~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ 150 (441)
+++..+..++.. . +...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.+
T Consensus 130 ~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~e 209 (501)
T 1uxt_A 130 LKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLD 209 (501)
T ss_dssp GGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHH
Confidence 887766654432 2 23678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|++|++++.+ +.++.|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.+
T Consensus 210 aGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i 285 (501)
T 1uxt_A 210 AGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKI 285 (501)
T ss_dssp TTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred hCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHH
Confidence 999999999999976 88999999999999999999999999999864 89999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|++++++|||++++++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 286 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~g 365 (501)
T 1uxt_A 286 ARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAG 365 (501)
T ss_dssp HHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCC-ceeecEEEeeCC---CCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhc
Q 013526 311 GKPIGKKG-YYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 386 (441)
Q Consensus 311 g~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l 386 (441)
|.. .| +|++|||+.+++ ++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++
T Consensus 366 G~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 442 (501)
T 1uxt_A 366 GRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLL 442 (501)
T ss_dssp CCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHC
T ss_pred Ccc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhC
Confidence 975 57 999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEcCc-CCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC-CCCC
Q 013526 387 RAGIIWINCY-FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF-NSPW 440 (441)
Q Consensus 387 ~~g~v~vN~~-~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~-~~~~ 440 (441)
++|+|+||++ ....+.+||||+|+||+|+++|.+++++||+.|+|++++. ..+|
T Consensus 443 ~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~~~~~~ 498 (501)
T 1uxt_A 443 EVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVW 498 (501)
T ss_dssp CSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECTTSSSS
T ss_pred CEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEecCCCccc
Confidence 9999999998 5567899999999999999999999999999999998763 5555
No 30
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.3e-90 Score=711.34 Aligned_cols=427 Identities=33% Similarity=0.519 Sum_probs=386.5
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..
T Consensus 46 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~ 124 (508)
T 3r64_A 46 QASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASF 124 (508)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHH-HHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 456777777764 557899999999999999999999999999999999999975 56999999999999988
Q ss_pred hhhhcCceeccc--cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHH-HHHHHHHHHcC
Q 013526 76 ADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAG 152 (441)
Q Consensus 76 ~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~-~~l~~~l~~ag 152 (441)
.++..+ ..+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++ .+|.+++.++|
T Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aG 203 (508)
T 3r64_A 125 PGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAG 203 (508)
T ss_dssp TTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTT
T ss_pred hhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhC
Confidence 876655 44432 356788999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhc--CCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+++++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ . +++|+++|+|||||+||++|||++.|++.+
T Consensus 204 lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i 282 (508)
T 3r64_A 204 VPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAA 282 (508)
T ss_dssp CCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred cCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHH
Confidence 9999999999977889999999999999999999999999999987 6 789999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 283 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~g 362 (508)
T 3r64_A 283 AVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVE 362 (508)
T ss_dssp HHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
|.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus 363 G~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 439 (508)
T 3r64_A 363 GPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGM 439 (508)
T ss_dssp CCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSE
T ss_pred CCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcce
Confidence 975 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 391 IWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 391 v~vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
|+||++... .+.+||||+|.||+|+++|.+++++||+.|+|+++..
T Consensus 440 V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 440 VHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp EEECC--------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred EEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 999998764 6889999999999999999999999999999998763
No 31
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6.4e-90 Score=707.79 Aligned_cols=431 Identities=27% Similarity=0.445 Sum_probs=381.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~ 118 (485)
T 4dng_A 40 LATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKS-TIELEQTIAILDEAMTY 118 (485)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677776664 668899999999999999999999999999999999999975 45999999999999999
Q ss_pred hhhhcCceeccc--cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHH-HHHHHHHHHcC
Q 013526 76 ADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAG 152 (441)
Q Consensus 76 ~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~-~~l~~~l~~ag 152 (441)
.+...+...+.. .+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++ .+|.+++.++|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aG 198 (485)
T 4dng_A 119 TGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAG 198 (485)
T ss_dssp GGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTT
T ss_pred HHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhC
Confidence 887666554432 356789999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|++|++++++.+.++.|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++
T Consensus 199 lP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~ 277 (485)
T 4dng_A 199 LPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIF 277 (485)
T ss_dssp CCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHH
T ss_pred cCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHH
Confidence 9999999999977778999999999999999999999999999987 788999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 278 ~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~ 357 (485)
T 4dng_A 278 GKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357 (485)
T ss_dssp HHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred HHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
. .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+
T Consensus 358 ~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~ 434 (485)
T 4dng_A 358 R---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTH 434 (485)
T ss_dssp E---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEE
T ss_pred C---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEE
Confidence 6 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCCCCC
Q 013526 393 INCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSP 439 (441)
Q Consensus 393 vN~~~~~-~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~~~~ 439 (441)
||++... .+.+||||+|.||+|+++|.+++++||+.|+|++++...+
T Consensus 435 vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~ 482 (485)
T 4dng_A 435 VNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQYRK 482 (485)
T ss_dssp ESCC----------------------CHHHHHHHEEEEEEEEEC----
T ss_pred ECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEecCCcC
Confidence 9998764 6889999999999999999999999999999998876543
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.9e-89 Score=705.22 Aligned_cols=429 Identities=28% Similarity=0.453 Sum_probs=398.1
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|+ .|+.++.++|.++|+++++.|++++++|+++++.|+|||..++ ..|+..+++.++++++.
T Consensus 55 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 133 (500)
T 2j6l_A 55 QASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGL 133 (500)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 34666777665 3667899999999999999999999999999999999999975 67999999999999988
Q ss_pred hhhhcCceeccc-cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----H
Q 013526 76 ADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----L 150 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~ 150 (441)
.+++.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. +
T Consensus 134 ~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~ 213 (500)
T 2j6l_A 134 SRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLED 213 (500)
T ss_dssp TTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHh
Confidence 877666544332 23445778999999999999999999999999999999999999999999999999888766 5
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|+++++++ +.+.++.|+.||++|.|.||||+.+++.|++.++ .+.+|+++|+|||||+||++|||++.|++.+
T Consensus 214 aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i 291 (500)
T 2j6l_A 214 NKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSA 291 (500)
T ss_dssp TTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHH
T ss_pred hcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHH
Confidence 6999999999999 7788999999999999999999999999999988 7899999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|.|+||.|++++++|||+++|++|+++|++.++++++|+|.|+++++||++++.+++++++++++++++|+++++|
T Consensus 292 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~g 371 (500)
T 2j6l_A 292 LFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYG 371 (500)
T ss_dssp HHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH--Hhccc
Q 013526 311 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS--RSIRA 388 (441)
Q Consensus 311 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~--~~l~~ 388 (441)
|...+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++ .++++
T Consensus 372 g~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~ 451 (500)
T 2j6l_A 372 GKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDC 451 (500)
T ss_dssp CSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCS
T ss_pred CcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCe
Confidence 9864447899999999999999999999999999999999999999999999999999999999999999999 77999
Q ss_pred eEEEEcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 452 G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 452 GIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINY 499 (500)
T ss_dssp SEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEEC
T ss_pred eEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEeC
Confidence 9999998765 3468999999999999999999999999999998763
No 33
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=3.2e-89 Score=706.10 Aligned_cols=429 Identities=30% Similarity=0.510 Sum_probs=398.1
Q ss_pred CCCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 70 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 148 (516)
T 1uzb_A 70 KAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARA 148 (516)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 35667777666 3668899999999999999999999999999999999999975 57999999999999998
Q ss_pred hhhhcCceec--cccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 76 ADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 76 ~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
++++.+...+ ...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGl 228 (516)
T 1uzb_A 149 ALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGF 228 (516)
T ss_dssp HGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTC
T ss_pred HHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 8877654322 12345678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhh-----cCCCceeeecCCCCceeecCCCCHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAAD 228 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iV~~dad~~~aa~ 228 (441)
|+|++|++++.+.+.+..|+.||++|.|.||||+.+++.|.+.++. ++++|+++|+|||||+||++|||++.|++
T Consensus 229 P~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~ 308 (516)
T 1uzb_A 229 PPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAE 308 (516)
T ss_dssp CTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHH
T ss_pred CcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHH
Confidence 9999999999777889999999999999999999999999998762 56899999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEe
Q 013526 229 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 308 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~ 308 (441)
.+++++|.|+||.|+++++||||++++++|+++|++.++++++|+| ++++++||++++.+++++++++++++++| +++
T Consensus 309 ~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~ 386 (516)
T 1uzb_A 309 GVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLV 386 (516)
T ss_dssp HHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEE
T ss_pred HHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEE
Confidence 9999999999999999999999999999999999999999999999 99999999999999999999999999999 899
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
+||......|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++
T Consensus 387 ~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~a 466 (516)
T 1uzb_A 387 LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHV 466 (516)
T ss_dssp ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCC
T ss_pred ECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCE
Confidence 99976334699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCC--CCCCCCccCCCCCCCCC-cchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~--~~~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~v~~~~ 435 (441)
|.|+||++.. ..+.+||||+|.||+|+ ++|.+++++||+.|+|++++
T Consensus 467 G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~ 516 (516)
T 1uzb_A 467 GNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp SEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEEC
T ss_pred eEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEecC
Confidence 9999998755 35789999999999995 78999999999999998753
No 34
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.6e-89 Score=702.55 Aligned_cols=424 Identities=32% Similarity=0.483 Sum_probs=397.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 36 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~ 114 (475)
T 1euh_A 36 AMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEE 114 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677776663 567899999999999999999999999999999999999974 67999999999999998
Q ss_pred hhhhcCceeccc-cc----ccc-ceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH
Q 013526 76 ADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 149 (441)
Q Consensus 76 ~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~ 149 (441)
++++.+...+.. .+ ... +.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~ 194 (475)
T 1euh_A 115 GLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFA 194 (475)
T ss_dssp HTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHH
T ss_pred HHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHH
Confidence 877665544432 23 355 889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 150 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 150 ~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
++|+|+|++|++++.+.+.++.|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.
T Consensus 195 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~ 271 (475)
T 1euh_A 195 EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKN 271 (475)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHH
T ss_pred HhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHH
Confidence 9999999999999976778999999999999999999999999999864 8999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.| ++++||++++.+++++++++++++++|+++++
T Consensus 272 i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~ 350 (475)
T 1euh_A 272 IIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALT 350 (475)
T ss_dssp HHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECS
T ss_pred HHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|
T Consensus 351 gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G 427 (475)
T 1euh_A 351 EIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVG 427 (475)
T ss_dssp CCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSS
T ss_pred CCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEe
Confidence 9975 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcC-cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 390 IIWINC-YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 390 ~v~vN~-~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
.|+||+ +....+.+||||+|+||+|+++|.+++++||+.|+|++++
T Consensus 428 ~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 428 TVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp EEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred eEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEec
Confidence 999999 6666789999999999999999999999999999998763
No 35
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=9.6e-89 Score=698.25 Aligned_cols=430 Identities=32% Similarity=0.492 Sum_probs=399.3
Q ss_pred CCHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
++.+++++|+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.+.
T Consensus 40 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~ 118 (486)
T 1t90_A 40 STKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAP 118 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4666777665 3668899999999999999999999999999999999999974 679999999999988766
Q ss_pred hhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 77 DKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 77 ~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+...+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 119 ~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~ 198 (486)
T 1t90_A 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPK 198 (486)
T ss_dssp HHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCT
T ss_pred HHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCC
Confidence 6655554332 234567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++ +.+.+..|+.||++|.|.||||+.+++.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 199 gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 276 (486)
T 1t90_A 199 GVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF 276 (486)
T ss_dssp TSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH
Confidence 99999998 5678999999999999999999999999999987 789999999999999999999999999999999999
Q ss_pred hccCCCcccCce-EEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcC
Q 013526 236 FNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 314 (441)
Q Consensus 236 ~~~Gq~C~~~~~-v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 314 (441)
.|+||.|+++++ +|||++ +++|+++|++.++++++|+|.++++++||++++.+++++++++++++++|+++++||...
T Consensus 277 ~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~ 355 (486)
T 1t90_A 277 GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN 355 (486)
T ss_dssp GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSS
T ss_pred hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC
Confidence 999999999999 999999 999999999999999999999999999999999999999999999999999999999743
Q ss_pred C-CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEE
Q 013526 315 G-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 393 (441)
Q Consensus 315 ~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~v 393 (441)
. +.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+|
T Consensus 356 ~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~v 435 (486)
T 1t90_A 356 VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGI 435 (486)
T ss_dssp CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEE
T ss_pred CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence 2 368999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCC-CCCCCCccCCCCCCCC--CcchHHHHHhhhhccEEEEeCCCC
Q 013526 394 NCYFA-FDSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVTPIFNS 438 (441)
Q Consensus 394 N~~~~-~~~~~p~GG~~~SG~g--~~~g~~~l~~~t~~k~v~~~~~~~ 438 (441)
|++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|+.++..+
T Consensus 436 N~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~~~~ 483 (486)
T 1t90_A 436 NLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPAP 483 (486)
T ss_dssp SCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEECCCC
T ss_pred CCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEecCCC
Confidence 98644 3578999999999999 899999999999999999876543
No 36
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.3e-89 Score=700.45 Aligned_cols=424 Identities=37% Similarity=0.602 Sum_probs=376.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 41 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 120 (478)
T 3ty7_A 41 KGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDA 120 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 356677776663 568899999999999999999999999999999999999986578999999999999998
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
+++..+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+
T Consensus 121 ~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~ 196 (478)
T 3ty7_A 121 LDNYEFEE----RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPK 196 (478)
T ss_dssp HHHCCSEE----EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCT
T ss_pred HHHhhccc----CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCc
Confidence 87765533 13467889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
|++|++++++.+.++.|+.||++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 197 gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 275 (478)
T 3ty7_A 197 GVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV 275 (478)
T ss_dssp TTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH
Confidence 9999999987789999999999999999999999999999887 789999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+||.|+++++||||++++++|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||....
T Consensus 276 ~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~ 355 (478)
T 3ty7_A 276 NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP 355 (478)
T ss_dssp GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999994322
Q ss_pred ---CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 316 ---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 316 ---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 356 ~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~ 435 (478)
T 3ty7_A 356 EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVE 435 (478)
T ss_dssp TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEE
T ss_pred cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEE
Q 013526 393 INCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 433 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~ 433 (441)
||+ ....+.+||||+|.||+|+++|.+++++||+.|+|+.
T Consensus 436 vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 436 INE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp ETT-CC----------------------CCGGGEEEEEEET
T ss_pred ECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 999 5566789999999999999999999999999999863
No 37
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4.4e-88 Score=691.83 Aligned_cols=432 Identities=29% Similarity=0.458 Sum_probs=398.1
Q ss_pred CCCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 3 ILPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 3 ~~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
..++.+++++|++ |+.+++++|.++|+++++.|++|+++|++++++|+||+... ..|+..+++.+++++.
T Consensus 23 ~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~--~~ev~~~~~~~~~~~~ 100 (474)
T 4h7n_A 23 IPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSIT--VLEIDSFLASIDRWCG 100 (474)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHH--HHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH--HHHHHHHHHHHHHHHh
Confidence 3567788888774 45789999999999999999999999999999999998653 4699999999999988
Q ss_pred hhhhhcCce-ecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 75 AADKIHGEV-LKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 75 ~~~~~~~~~-~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
...+..... .+. .++...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag 180 (474)
T 4h7n_A 101 LAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVP 180 (474)
T ss_dssp HHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCT
T ss_pred hhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhc
Confidence 776654332 222 134556778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+++++++ +.+.+..|+.| +|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++
T Consensus 181 ~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~ 256 (474)
T 4h7n_A 181 ELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAA-RRFIPAYLELGGKDPAIVLESANLELATSAILW 256 (474)
T ss_dssp TTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHH-HHTCCEEEECCCCEEEEECTTSCHHHHHHHHHH
T ss_pred ccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhh-cccccccccCCCcCccccCchhhHHHHHHHHHh
Confidence 99999999999 66778888876 899999999999999999988 789999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|+|+||.|++++|+|||++++++|+++|++.++++++|+|.++++++||++++.+++++++++++++++|+++++||.
T Consensus 257 ~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~ 336 (474)
T 4h7n_A 257 GAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGK 336 (474)
T ss_dssp HHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred hhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC-CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEE
Q 013526 313 PIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 391 (441)
Q Consensus 313 ~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v 391 (441)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|
T Consensus 337 ~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v 416 (474)
T 4h7n_A 337 VEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAI 416 (474)
T ss_dssp CEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEE
T ss_pred ccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEE
Confidence 653 4789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeCC--CCCC
Q 013526 392 WINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPIF--NSPW 440 (441)
Q Consensus 392 ~vN~~~~--~~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~~--~~~~ 440 (441)
+||+... ..+..||||+|.||+| +++|.+|+++||++|+|+++.+ ..||
T Consensus 417 ~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~ 470 (474)
T 4h7n_A 417 SINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPW 470 (474)
T ss_dssp EESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTT
T ss_pred EECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCC
Confidence 9999866 4578999999999998 7889999999999999999864 5565
No 38
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.3e-87 Score=685.76 Aligned_cols=420 Identities=25% Similarity=0.376 Sum_probs=383.2
Q ss_pred CCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 013526 5 PSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 76 (441)
Q Consensus 5 ~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 76 (441)
.|++++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++..
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666664 5578999999999999999999999999999999999999866679999999888877665
Q ss_pred hhhcCc-ee---ccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC
Q 013526 77 DKIHGE-VL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 152 (441)
Q Consensus 77 ~~~~~~-~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag 152 (441)
...... .. ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 443221 11 1112446788999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|+++++++. .+....|+.| ++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++
T Consensus 174 lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~ 250 (469)
T 3sza_A 174 LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAW 250 (469)
T ss_dssp SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHHHH
T ss_pred CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHHHH
Confidence 999999999994 4556677788 7999999999999999999988 889999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
++|.|+||.|+++++||||+++|++|+++|+++++++ .|+|.++++++||++++.+++++++++ +|+++++||.
T Consensus 251 ~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~ 324 (469)
T 3sza_A 251 GKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGT 324 (469)
T ss_dssp HHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCC
T ss_pred HHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCc
Confidence 9999999999999999999999999999999999998 599999999999999999999999998 6899999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+
T Consensus 325 ~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~ 403 (469)
T 3sza_A 325 GDA-ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVA 403 (469)
T ss_dssp EET-TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred cCC-CCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 753 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 393 INCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 393 vN~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 404 vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 404 ANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp ESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred EeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 999864 4688999999999999999999999999999998864
No 39
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2.1e-87 Score=695.38 Aligned_cols=431 Identities=25% Similarity=0.410 Sum_probs=398.1
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEH-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~-~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 74 (441)
.++.+++++|++ |+.++.++|.++|+++++.|+++ +++|+.++++|+|||..++...++..+++.+++++.
T Consensus 96 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~ 175 (563)
T 4e3x_A 96 YADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAK 175 (563)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 467788888875 55789999999999999999999 999999999999999997543349999999999999
Q ss_pred hhhhhcCce-eccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 75 AADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 75 ~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
.++++.+.. ...+.+...+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++..|++++.++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGl 254 (563)
T 4e3x_A 176 FAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGL 254 (563)
T ss_dssp HHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTC
T ss_pred HHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCC
Confidence 988776532 2222234466778888999999999999999999999999 59999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCC------ceeeecCCCCceeecCCCCHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAA 227 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~------~~~~e~gg~~~~iV~~dad~~~aa 227 (441)
|+|+||++++++.+.++.|+.||+++.|.||||+.+++.|.+.++ .+++ |+++|+|||||+||++|||++.|+
T Consensus 255 P~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa 333 (563)
T 4e3x_A 255 PPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVV 333 (563)
T ss_dssp CTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHH
T ss_pred CCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHH
Confidence 999999999988888999999999999999999999999999988 6666 499999999999999999999999
Q ss_pred HHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCC-CCCCCCcccccCHHHHHHHHHHHHHHHH-cCC
Q 013526 228 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGA 305 (441)
Q Consensus 228 ~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga 305 (441)
+.+++++|.|+||.|++++|+|||+++|++|+++|+++++++++|+| .|+++++||++++.+++++.++|+++++ +|+
T Consensus 334 ~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga 413 (563)
T 4e3x_A 334 SGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL 413 (563)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999999999 9999999999999999999999999996 899
Q ss_pred eEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHH
Q 013526 306 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTV 382 (441)
Q Consensus 306 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~s~d~~~~~~~ 382 (441)
++++||......|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++ |+++|||+++|||+|.+.++++
T Consensus 414 ~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~ 493 (563)
T 4e3x_A 414 SILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEA 493 (563)
T ss_dssp EEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHH
T ss_pred EEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHH
Confidence 99999987666899999999999999999999999999999999997 79999999 7899999999999999999999
Q ss_pred HHhcc--ceEEEEcCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeCC
Q 013526 383 SRSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 383 ~~~l~--~g~v~vN~~~~--~~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+++++ +|+|+||+.++ ..+.+||||+|.||+| +.+|++++++|++.|+|..++.
T Consensus 494 ~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 494 TRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHK 552 (563)
T ss_dssp HHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEECS
T ss_pred HHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEeCc
Confidence 99976 99999999865 3578999999999998 7999999999999999998875
No 40
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.1e-85 Score=671.26 Aligned_cols=418 Identities=27% Similarity=0.415 Sum_probs=386.1
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 24 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 103 (457)
T 3lns_A 24 YLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAH 103 (457)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777777774 457899999999999999999999999999999999999985546999999999999988
Q ss_pred hhhhcCc-eecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc
Q 013526 76 ADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 151 (441)
Q Consensus 76 ~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a 151 (441)
++++... ..+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 183 (457)
T 3lns_A 104 LDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA 183 (457)
T ss_dssp HHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 7765432 2221 13456789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 152 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 152 glP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
+|+|++|++++ +.+.+..|+. +++|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.++
T Consensus 184 -lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~ 259 (457)
T 3lns_A 184 -FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLM 259 (457)
T ss_dssp -CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHH
T ss_pred -CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHh-hccCceEEECCCCCCCeECCCCCHHHHHHHHH
Confidence 99999999999 6788899988 68999999999999999999988 88999999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|.|+||.|+++++||||++++++|+++|++.+++++ |.++ ++||++++.++++++++++++. +++++||
T Consensus 260 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg 331 (457)
T 3lns_A 260 FGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGS 331 (457)
T ss_dssp HHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECC
T ss_pred HHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCC
Confidence 999999999999999999999999999999999999987 6665 9999999999999999999863 5999999
Q ss_pred CcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHHhccceE
Q 013526 312 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN-TRYGLAAGIMTKDLNVANTVSRSIRAGI 390 (441)
Q Consensus 312 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~v~s~d~~~~~~~~~~l~~g~ 390 (441)
.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+ ++|||++||||+|.+.++++++++++|+
T Consensus 332 ~~~~-~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 410 (457)
T 3lns_A 332 QADV-SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGD 410 (457)
T ss_dssp CEEG-GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSE
T ss_pred ccCC-CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcce
Confidence 7643 7899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred EEEcCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 013526 391 IWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 391 v~vN~~~~--~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 434 (441)
|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|++.
T Consensus 411 v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 411 AQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999854 568899999999999999999999999999998763
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=9.5e-86 Score=676.69 Aligned_cols=422 Identities=26% Similarity=0.374 Sum_probs=392.6
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.
T Consensus 38 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~ 116 (490)
T 3ju8_A 38 GADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWES-ATEVTSMVNKVAISVQA 116 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 356677777664 557899999999999999999999999999999999999975 57999999999999988
Q ss_pred hhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCC
Q 013526 76 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 155 (441)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~ 155 (441)
.++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++|+|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~ 196 (490)
T 3ju8_A 117 FRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPA 196 (490)
T ss_dssp HHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCT
T ss_pred HHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCc
Confidence 87776654432234456777999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCce-eeecCCCCceeecCCCCHHHHHHHHHHHH
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV-SLELGGKSPLLIFDDVDVNTAADMALLGI 234 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~-~~e~gg~~~~iV~~dad~~~aa~~i~~~~ 234 (441)
|++|++++ +.+.++.|+.||++|.|.||||+.+++.|.+.++ .+++|+ ++|+|||||+||++|||++.|++.+++++
T Consensus 197 gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~ 274 (490)
T 3ju8_A 197 GVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG-GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSA 274 (490)
T ss_dssp TTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT-TCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHH
T ss_pred CeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-ccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 99999999 6788999999999999999999999999999987 788998 79999999999999999999999999999
Q ss_pred hhccCCCcccCceEEEeCcc-HHHHHHHHHHHHhccccCC-CCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 235 LFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 235 ~~~~Gq~C~~~~~v~V~~~~-~~~f~~~L~~~~~~~~~g~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
|+|+||.|++++++|||+++ +++|+++|+++++++++|+ |.|+++++||++++.+++++++++++++++|+++++||.
T Consensus 275 ~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~ 354 (490)
T 3ju8_A 275 FISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMT 354 (490)
T ss_dssp HGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred HhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 99999999999999999996 9999999999999999999 999999999999999999999999999999999999998
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
..+..|+|++|||+. ++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 355 ~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 433 (490)
T 3ju8_A 355 QPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVN 433 (490)
T ss_dssp CCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred ccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEE
Confidence 765689999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 393 INCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 393 vN~~~~-~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
||++.. ..+.+||||+|.||.+ ++++||+.|+|++..
T Consensus 434 vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 434 WNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp ESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred ECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999876 4578999999999974 588999999988764
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.4e-85 Score=716.67 Aligned_cols=430 Identities=31% Similarity=0.490 Sum_probs=403.4
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.+++++|.++|+++++.|++++++|+.++++|+|||..+ +..|+..+++.+++++..
T Consensus 564 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~e-a~~Ev~~aid~lr~~a~~ 642 (1026)
T 4f9i_A 564 QAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYARE 642 (1026)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh-HHHHHHHHHHHHHHHHHH
Confidence 467778877774 55789999999999999999999999999999999999997 567999999999999999
Q ss_pred hhhhcCceecc-ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCC
Q 013526 76 ADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 154 (441)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP 154 (441)
++++.+...+. ..+..++..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|
T Consensus 643 ~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP 722 (1026)
T 4f9i_A 643 MIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLP 722 (1026)
T ss_dssp HHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCC
T ss_pred HHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcC
Confidence 88776543322 35667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhh-----cCCCceeeecCCCCceeecCCCCHHHHHHH
Q 013526 155 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADM 229 (441)
Q Consensus 155 ~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iV~~dad~~~aa~~ 229 (441)
+|+||++++++.+.+..|+.||+++.|+||||+.+++.|.+.++. ++.+|+++|+|||||+||++|||++.|++.
T Consensus 723 ~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~ 802 (1026)
T 4f9i_A 723 EGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPH 802 (1026)
T ss_dssp TTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHH
T ss_pred CCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHH
Confidence 999999999888899999999999999999999999999998862 367999999999999999999999999999
Q ss_pred HHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEec
Q 013526 230 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 309 (441)
Q Consensus 230 i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~ 309 (441)
+++++|.|+||.|++++++|||++++++|+++|++.++++++|+|.|+++++||++++.+++++.++|++++.+| ++++
T Consensus 803 iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~ 881 (1026)
T 4f9i_A 803 VLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLY 881 (1026)
T ss_dssp HHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEE
T ss_pred HHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 310 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 310 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
||..+...|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|
T Consensus 882 gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG 961 (1026)
T 4f9i_A 882 ESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVG 961 (1026)
T ss_dssp ECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCS
T ss_pred cCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEe
Confidence 99865545999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCC--CCCCCCccCCCCCCCCC-cchHHHHHhhhhccEEEEeC
Q 013526 390 IIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 390 ~v~vN~~~~--~~~~~p~GG~~~SG~g~-~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|+||+.++ ..+.+||||+|.||+|. .+|++++++|++.|+|++++
T Consensus 962 ~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 962 NLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp EEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred eEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 999999876 34789999999999995 78999999999999999875
No 43
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=5.2e-83 Score=695.05 Aligned_cols=425 Identities=27% Similarity=0.418 Sum_probs=396.2
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++.++|.++|+++++.|++++++|+++++.|+|||..+ +..|+..+++.+++++..
T Consensus 546 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~e-a~~Ev~~ai~~lr~~a~~ 624 (1001)
T 3haz_A 546 DATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDD-ALSELREAADFCRYYAAQ 624 (1001)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH-HHHHHHHHHHHHHHHHHH
Confidence 467778877774 56789999999999999999999999999999999999997 567999999999999999
Q ss_pred hhhhcCce--eccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCC
Q 013526 76 ADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 153 (441)
Q Consensus 76 ~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~agl 153 (441)
+++..+.. .+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+
T Consensus 625 a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGl 704 (1001)
T 3haz_A 625 GRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGI 704 (1001)
T ss_dssp HHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred HHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCc
Confidence 88766543 3334567788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhc--CCCceeeecCCCCceeecCCCCHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMAL 231 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~ 231 (441)
|+|+||++++++.+ +..|+.||++|.|+||||+.+++.|.+.++.. ..+|+++|+|||||+||++|||++.|++.++
T Consensus 705 P~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv 783 (1001)
T 3haz_A 705 PKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVV 783 (1001)
T ss_dssp CTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred CcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHH
Confidence 99999999997777 99999999999999999999999999988743 4799999999999999999999999999999
Q ss_pred HHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCC
Q 013526 232 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 311 (441)
Q Consensus 232 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg 311 (441)
+++|.|+||.|+++++||||++++++|+++|++.++++++|+|.++++++||++++.+++++.++|++++.+| ++ +||
T Consensus 784 ~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg 861 (1001)
T 3haz_A 784 TSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFA 861 (1001)
T ss_dssp HHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEE
T ss_pred HHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ecc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988 88 888
Q ss_pred CcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccce
Q 013526 312 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 389 (441)
Q Consensus 312 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g 389 (441)
..+. .|+|+.|||+.+ +++.++++|+||||++|++|++ ++|||+++|+++|||+++|||+|.+.++++++++++|
T Consensus 862 ~~~~-~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG 938 (1001)
T 3haz_A 862 GPAP-EGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVG 938 (1001)
T ss_dssp CCCC-SSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCS
T ss_pred ccCC-CCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCee
Confidence 7654 699999999974 6789999999999999999996 8999999999999999999999999999999999999
Q ss_pred EEEEcCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhccEEEEeC
Q 013526 390 IIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 390 ~v~vN~~~~~--~~~~p~GG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 435 (441)
+|+||+..+. .+.+||||+|.||+| ..+|++++++||+.|+|+++.
T Consensus 939 ~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 939 NIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp EEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred eEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999998763 367899999999999 578999999999999999875
No 44
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2.9e-83 Score=664.73 Aligned_cols=414 Identities=22% Similarity=0.330 Sum_probs=375.7
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhhhhcCc-------eeccc
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-------VLKMS 87 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~ 87 (441)
.|+.++.++|.++|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..++++.+. ..+..
T Consensus 59 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~ 137 (534)
T 2y53_A 59 ALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLS 137 (534)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECS
T ss_pred hhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhccccccccCCccccCC
Confidence 5778999999999999999999999999999999999999975 469999999999999887665431 12221
Q ss_pred -cc-cccceeeccc-ceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcC-CCCCcEEEEeC
Q 013526 88 -RA-LQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPG 163 (441)
Q Consensus 88 -~~-~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~ag-lP~~~v~~~~~ 163 (441)
.+ ...+..++|+ |||++|+|||||++..++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||++++
T Consensus 138 ~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g 217 (534)
T 2y53_A 138 KDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG 217 (534)
T ss_dssp TTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCS
T ss_pred CCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeC
Confidence 11 1357889997 99999999999999999999999999999999999999999999999999999 79999999998
Q ss_pred CchhHHHHHHhC-CCcCEEEEeCCcHHHHHHHHHHh-hcCCCceeeecCCCCceeecCCC-----CHHHHHHHHHHHHhh
Q 013526 164 FGPTAGAAIASH-MDIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILF 236 (441)
Q Consensus 164 ~~~~~~~~l~~~-~~v~~v~ftGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iV~~da-----d~~~aa~~i~~~~~~ 236 (441)
.+.+ +..+ +++|.|.||||+.+++.|.+.++ .+++||+++|+|||||+||++|| |++.|++.+++++|.
T Consensus 218 ~~~~----l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~ 293 (534)
T 2y53_A 218 SSAG----LLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTV 293 (534)
T ss_dssp CCTT----SGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHG
T ss_pred ChHH----HHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHh
Confidence 5543 3333 67999999999999999998763 36789999999999999999999 999999999999999
Q ss_pred ccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC-
Q 013526 237 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG- 315 (441)
Q Consensus 237 ~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~- 315 (441)
|+||.|++++|+|||+++|++|+++|+++++++++|+|.|+++++||++++.++++++++|+++ .+|+++++||....
T Consensus 294 n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~ 372 (534)
T 2y53_A 294 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPL 372 (534)
T ss_dssp GGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCC
T ss_pred CCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 68999999997431
Q ss_pred -----CCCceeecEEEeeCCCC--ccccccccccceEEEEEeC---CH-----HHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013526 316 -----KKGYYIEPTIFTNVTED--MLIAKNEIFGPVMALMKFK---TV-----EEAIKSANNTRYGLAAGIMTKDLNVAN 380 (441)
Q Consensus 316 -----~~g~~~~Ptvl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~~v~s~d~~~~~ 380 (441)
..|+|++|||+.+++++ |++++||+||||++|++|+ |+ +|||+++|+++|||++||||+|.++++
T Consensus 373 ~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 452 (534)
T 2y53_A 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLG 452 (534)
T ss_dssp BSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHH
T ss_pred ccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 36899999999999887 6899999999999999999 99 999999999999999999999999999
Q ss_pred HHHHhc--cceEEEEcCcCC---------CCCCCCccCCCCCCCCCc-chHHHHHhhhhccEEEEe
Q 013526 381 TVSRSI--RAGIIWINCYFA---------FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVTP 434 (441)
Q Consensus 381 ~~~~~l--~~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~-~g~~~l~~~t~~k~v~~~ 434 (441)
++++++ ++|+|+||++.. ..+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 453 ~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 453 RLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp HHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred HHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 999999 899999998642 357899999999999998 699999999999998763
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.5e-80 Score=640.90 Aligned_cols=414 Identities=22% Similarity=0.278 Sum_probs=372.7
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.++++++.
T Consensus 59 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~l~~~a~~ 137 (528)
T 3v4c_A 59 VGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADH 137 (528)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 456777777663 56789999999999999999999999999999999999996 457999999999999988
Q ss_pred hhhh--cCceec----c---ccccccceeecccceEEEECCCccchHhhH--HHHHHHHhhCCeEEEeCCCcchHHHHHH
Q 013526 76 ADKI--HGEVLK----M---SRALQGYTLREPIGVVGHIIPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYF 144 (441)
Q Consensus 76 ~~~~--~~~~~~----~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~i~~AL~aGn~vv~kps~~~~~~~~~l 144 (441)
+++. .+...+ . ..+...+.+++|+|||++|+|||||+...+ +++++||++||+||+|||+.+|+++..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 217 (528)
T 3v4c_A 138 IEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIV 217 (528)
T ss_dssp HHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHH
Confidence 8762 222221 1 123456889999999999999999999865 8999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCC--CceeeecCCCCceeec
Q 013526 145 AHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIF 218 (441)
Q Consensus 145 ~~~l----~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~--~~~~~e~gg~~~~iV~ 218 (441)
++++ .++|+|+|+||++++.+.+.+..|+.||++|.|.||||+.+++.|.+.++ .++ +|+++|+|||||+||+
T Consensus 218 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~ 296 (528)
T 3v4c_A 218 AEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLL 296 (528)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEEC
T ss_pred HHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEEC
Confidence 8875 56899999999999988889999999999999999999999999999987 777 8999999999999999
Q ss_pred CCC---CHHHHHHHHHHHHhhccCCCcccCceEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHH
Q 013526 219 DDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 294 (441)
Q Consensus 219 ~da---d~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~ 294 (441)
+|| |++.|++.+++++|.|+||.|++++++|||++ +|++|+++|++++++++.| +.+||++++.+.+++.
T Consensus 297 ~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~ 370 (528)
T 3v4c_A 297 PEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQA 370 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHH
T ss_pred CCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHH
Confidence 999 88999999999999999999999999999998 9999999999999998643 5789999888887777
Q ss_pred HHHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCC---ccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 013526 295 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 371 (441)
Q Consensus 295 ~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v 371 (441)
+++. .+|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 371 ~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v 444 (528)
T 3v4c_A 371 RFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATI 444 (528)
T ss_dssp HHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEE
T ss_pred HHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEE
Confidence 7653 479999999975 7999999999988877 899999999999999999999999999999999999999
Q ss_pred ecC--CHHHHHHHHHhcc--ceEEEEcCcCC---CCCCCCccC-CCCCCCCCcc--hHHHHHhhhhccEE
Q 013526 372 MTK--DLNVANTVSRSIR--AGIIWINCYFA---FDSDCPYGG-YKMSGFGRDC--GLESLHNYLQVKSV 431 (441)
Q Consensus 372 ~s~--d~~~~~~~~~~l~--~g~v~vN~~~~---~~~~~p~GG-~~~SG~g~~~--g~~~l~~~t~~k~v 431 (441)
||+ |.+++++++++++ +|+|+||++++ ..+.+|||| +|.||+|+++ |++|+++||++|++
T Consensus 445 ~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 445 HMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp ECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred EcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 999 8899999999998 99999999765 358899999 9999999875 99999999999874
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=7.8e-80 Score=635.71 Aligned_cols=413 Identities=20% Similarity=0.264 Sum_probs=371.0
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 75 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~ 75 (441)
.++.+++++|++ |+.++..+|.++|+++++.|++++++|++++++|+|||..+ +..|+..+++.++++++.
T Consensus 26 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~Ev~~~~~~~~~~a~~ 104 (510)
T 1ez0_A 26 VHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADV 104 (510)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 356777777663 55789999999999999999999999999999999999986 567999999999999988
Q ss_pred hhh--hcCceec----c--ccc-cccceeecccceEEEECCCccchHhh--HHHHHHHHhhCCeEEEeCCCcchHHHHHH
Q 013526 76 ADK--IHGEVLK----M--SRA-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKVSPALAAGCTMIVKPAEQTPLIALYF 144 (441)
Q Consensus 76 ~~~--~~~~~~~----~--~~~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~i~~AL~aGn~vv~kps~~~~~~~~~l 144 (441)
+++ ..+..++ . +.+ ...+.+++|+|||++|+|||||++.. .+++++||++||+||+|||+.+|+++..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 184 (510)
T 1ez0_A 105 VNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 184 (510)
T ss_dssp HHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHH
Confidence 865 3333221 1 111 23578999999999999999999985 49999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCC--CceeeecCCCCceeec
Q 013526 145 AHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIF 218 (441)
Q Consensus 145 ~~~l----~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~--~~~~~e~gg~~~~iV~ 218 (441)
++++ .++|+|+|++|++++.+.+.++.|+.||++|.|.||||+.+++.|++.++ .++ +|+++|+|||||+||+
T Consensus 185 ~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa-~~l~~~pv~lELGGk~p~iV~ 263 (510)
T 1ez0_A 185 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIF 263 (510)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEEC
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhh-ccCCCccEEEECCCCCeEEEe
Confidence 9987 56799999999999977788999999999999999999999999999987 564 9999999999999999
Q ss_pred CCCCHH--HHHHHHHHHHhhccCCCcccCceEEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHH
Q 013526 219 DDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 295 (441)
Q Consensus 219 ~dad~~--~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~ 295 (441)
+|||++ .|++.+++++|+|+||.|++++++|||++ ++++|+++|++.++++++ ||++++.+.+++.+
T Consensus 264 ~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~ 333 (510)
T 1ez0_A 264 PSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQS 333 (510)
T ss_dssp HHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHH
Confidence 999999 99999999999999999999999999999 999999999999999863 57888889999999
Q ss_pred HHHHHHH-cCCeEecCCCcCCCCCceeecEEEeeCCCC---ccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 013526 296 YIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 371 (441)
Q Consensus 296 ~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v 371 (441)
+++++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++|++|+|++|||+++|+++|||++||
T Consensus 334 ~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v 409 (510)
T 1ez0_A 334 QVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATI 409 (510)
T ss_dssp HHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEE
T ss_pred HHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEE
Confidence 9999984 7999999997 3899999999988777 999999999999999999999999999999999999999
Q ss_pred ecCCH--HHHHHHHHhc--cceEEEEcCcCC---CCCCCCccC-CCCCCCCC--cchHHHHHhhhhccEEE
Q 013526 372 MTKDL--NVANTVSRSI--RAGIIWINCYFA---FDSDCPYGG-YKMSGFGR--DCGLESLHNYLQVKSVV 432 (441)
Q Consensus 372 ~s~d~--~~~~~~~~~l--~~g~v~vN~~~~---~~~~~p~GG-~~~SG~g~--~~g~~~l~~~t~~k~v~ 432 (441)
||+|. ++++++++++ ++|+|+||++.. ..+.+|||| +|.||.|. .+|.+++++|++.|.+.
T Consensus 410 ~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 410 HATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp ECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred EccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 99987 7899999999 799999999865 357899999 79999875 47999999999988754
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=4.7e-75 Score=593.86 Aligned_cols=407 Identities=20% Similarity=0.222 Sum_probs=354.1
Q ss_pred CHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhh
Q 013526 6 SRQHVRRLI--------TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 77 (441)
Q Consensus 6 ~~~~~~~a~--------~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~ 77 (441)
+.+++++++ .|+.++.++|.++|+++++.|++++++|++++++|+||+..++...+...+++.+..+....+
T Consensus 10 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~~~~~ 89 (464)
T 3k9d_A 10 SIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMK 89 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhhhccc
Confidence 345555555 366889999999999999999999999999999999999987543344444444433322211
Q ss_pred hhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHH----HHHHHcCC
Q 013526 78 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA----HLAKLAGV 153 (441)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~----~~l~~agl 153 (441)
..+ ......+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++ +++.++|+
T Consensus 90 -~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~ 167 (464)
T 3k9d_A 90 -TIG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167 (464)
T ss_dssp -CSE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred -ccc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCC
Confidence 111 122234667888999999999999999999999999999999999999999999999998765 45688999
Q ss_pred CCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecC-CCCceeecCCCCHHHHHHHHHH
Q 013526 154 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 154 P~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~g-g~~~~iV~~dad~~~aa~~i~~ 232 (441)
|+|+++++++++.+.++.|+.||++|.|+||||+.. .+.++ ++++|+ +|+| ||+|+||++|||++.|++.+++
T Consensus 168 P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~ 241 (464)
T 3k9d_A 168 PKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILD 241 (464)
T ss_dssp CTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHH
T ss_pred CCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHH
Confidence 999999999988889999999999999999999984 34444 788999 6777 9999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHH-------hccccCCCC-CCCCCcccccCHHHHHHHHHHHHHHHHcC
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREG 304 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 304 (441)
++|+|+||.|+++++||||+++|++|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|
T Consensus 242 ~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~g 321 (464)
T 3k9d_A 242 SKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPAD 321 (464)
T ss_dssp HHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTT
T ss_pred HHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCC
Confidence 9999999999999999999999999999999986 456788887 77899999999999999999999999999
Q ss_pred CeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHH----HHHhcCCCCcEEEEecCCHHHHH
Q 013526 305 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI----KSANNTRYGLAAGIMTKDLNVAN 380 (441)
Q Consensus 305 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~s~d~~~~~ 380 (441)
+++++||.. ++++++++. +|+||||++|++|+|++||| +++|+++|||+++|||+|.+.++
T Consensus 322 a~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~ 386 (464)
T 3k9d_A 322 ARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIR 386 (464)
T ss_dssp CCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHH
T ss_pred CEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHH
Confidence 999999863 456777765 89999999999999999997 79999999999999999999999
Q ss_pred HHHHhccceEEEEcCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhccEEEEeCC
Q 013526 381 TVSRSIRAGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 381 ~~~~~l~~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
++++++++|+|+||++.. ..+.+|||| |.+|.|.++|..++++|++.|+|.+...
T Consensus 387 ~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 387 EFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp HHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred HHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 999999999999999865 468899998 7899999999999999999999987654
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=7.7e-76 Score=598.41 Aligned_cols=381 Identities=15% Similarity=0.154 Sum_probs=311.0
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhhccHHH-HHHHHHHHHHhhhhhc------Cce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYAGAADKIH------GEV 83 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~~~ev~~-~~~~l~~~~~~~~~~~------~~~ 83 (441)
.|+.++.++|.++|+++++.|++++++|++++++|+|||. .++...|+.. +++.++++++.++... +..
T Consensus 29 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~ 108 (468)
T 1vlu_A 29 ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKV 108 (468)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCE
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCee
Confidence 5889999999999999999999999999999999999998 7654468888 8888888888776654 443
Q ss_pred eccc---cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----H----cC
Q 013526 84 LKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----L----AG 152 (441)
Q Consensus 84 ~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~----ag 152 (441)
.+.. .+...+.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++++. + +|
T Consensus 109 ~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aG 186 (468)
T 1vlu_A 109 KMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETG 186 (468)
T ss_dssp EEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcC
Confidence 3321 2455789999999999999999 9 9999999999999999999999999999999999995 8 99
Q ss_pred CCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHH
Q 013526 153 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 232 (441)
Q Consensus 153 lP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~ 232 (441)
+|+|++|+++ .+.+.++.|..||++|.|.||||+.+++.|.+.+ .+|+++|+|||||+||++|||++.|++.+++
T Consensus 187 lP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~ 261 (468)
T 1vlu_A 187 VPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLD 261 (468)
T ss_dssp CCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHH
T ss_pred CCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHH
Confidence 9999999999 6667889999999999999999999999998864 6999999999999999999999999999999
Q ss_pred HHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhcccc---CCCCCCCCCcccccCHHHHHHHHHH-HHHHHHcCCeEe
Q 013526 233 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRILSY-IEHGKREGATLL 308 (441)
Q Consensus 233 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~-i~~a~~~ga~v~ 308 (441)
++|.|+| .|+++++||||+++ ++|+++|++.++++++ |+|.+ +++ +++++ +++
T Consensus 262 ~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~ 318 (468)
T 1vlu_A 262 AKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELG 318 (468)
T ss_dssp TTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHT
T ss_pred HhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eee
Confidence 9999999 99999999999999 9999999999999987 77542 344 56555 467
Q ss_pred cCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccc
Q 013526 309 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 388 (441)
Q Consensus 309 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 388 (441)
+||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++
T Consensus 319 ~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~a 389 (468)
T 1vlu_A 319 KLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDS 389 (468)
T ss_dssp CCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCC
T ss_pred ccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCe
Confidence 7775 4 789997 788999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCcCCCCCCCCcc-----CCCCCCCCCcchHHHHHhhhhccEEEEeC
Q 013526 389 GIIWINCYFAFDSDCPYG-----GYKMSGFGRDCGLESLHNYLQVKSVVTPI 435 (441)
Q Consensus 389 g~v~vN~~~~~~~~~p~G-----G~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 435 (441)
|.|+||++....+..||| |+|.||+|++ |.+++++||+.|+|+++.
T Consensus 390 G~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 390 SGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp SEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred eEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 999999988777889999 9999999999 999999999999998864
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1e-73 Score=582.12 Aligned_cols=372 Identities=17% Similarity=0.158 Sum_probs=320.6
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CCChhh---hhhccHHHHHHHHHHHHHhhhhhcCcee
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDA-------GKLHSW---AKMGDIPGAANTLRYYAGAADKIHGEVL 84 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~~~~---~~~~ev~~~~~~l~~~~~~~~~~~~~~~ 84 (441)
.|+.++..+|.++|+++++.|++++++|++++++|+ |||..+ .+..|+..+++.++++++.+++..+...
T Consensus 44 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~ 123 (463)
T 2h5g_A 44 MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVL 123 (463)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEE
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCccc
Confidence 467899999999999999999999999999999999 699873 1346999999999999988777666544
Q ss_pred ccc---cccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHc----CCCCCc
Q 013526 85 KMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGV 157 (441)
Q Consensus 85 ~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~a----glP~~~ 157 (441)
+.. .+...+.+++|+|||++|+||| |.+.. +++++||++||+||+|||+.+|+++..|++++.++ | |+|+
T Consensus 124 ~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gv 200 (463)
T 2h5g_A 124 RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEA 200 (463)
T ss_dssp EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGG
T ss_pred ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCe
Confidence 322 3445688999999999999887 87776 79999999999999999999999999999999999 8 9999
Q ss_pred EEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhc
Q 013526 158 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 237 (441)
Q Consensus 158 v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~ 237 (441)
||++++ +.+.+..|+.||++|.|.||||+.+++.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 201 v~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n 276 (463)
T 2h5g_A 201 VQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY 276 (463)
T ss_dssp EEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC
T ss_pred EEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC
Confidence 999999 6678999999999999999999999999999864 899999999999999999999999999999999999
Q ss_pred cCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCC
Q 013526 238 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 317 (441)
Q Consensus 238 ~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~ 317 (441)
||.|+++++||||+++|+ ||+ +.+++++++++|++++.|+... ..
T Consensus 277 -GQ~C~a~~rvlV~~~i~d-------------------------~p~--------~~~~i~~~~~~Ga~v~~G~~~~-~~ 321 (463)
T 2h5g_A 277 -PAACNALETLLIHRDLLR-------------------------TPL--------FDQIIDMLRVEQVKIHAGPKFA-SY 321 (463)
T ss_dssp -TTSTTSEEEEEEEGGGTT-------------------------SHH--------HHHHHHHHHHTTCEEEECHHHH-C-
T ss_pred -CCccccCcEEEEeccccc-------------------------hHH--------HHHHHHHHHhCCCEEEeCCccc-cc
Confidence 999999999999999998 343 2345788888999998554321 23
Q ss_pred CceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcCcC
Q 013526 318 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 397 (441)
Q Consensus 318 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~~~ 397 (441)
++|+ +++|++++||+||||++|++|+|+||||+++|++++||++||||+|.++++++++++++|+|+||++.
T Consensus 322 g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~ 393 (463)
T 2h5g_A 322 LTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNAST 393 (463)
T ss_dssp ----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCG
T ss_pred CccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCc
Confidence 4443 57899999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhccEEEEeCC
Q 013526 398 AFDSDCPYGGYKMSGFG--RD--CGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 398 ~~~~~~p~GG~~~SG~g--~~--~g~~~l~~~t~~k~v~~~~~ 436 (441)
...+.+||||+|+||+| ++ +|.+++++||+.|+|+++..
T Consensus 394 ~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 394 RFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp GGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred cCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence 77788999999999999 54 89999999999999988753
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=9e-73 Score=570.84 Aligned_cols=372 Identities=19% Similarity=0.213 Sum_probs=328.2
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhh-------hccHHHHHHHHHHHHHhhhhhcCce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAK-------MGDIPGAANTLRYYAGAADKIHGEV 83 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~-------~~ev~~~~~~l~~~~~~~~~~~~~~ 83 (441)
.|+.++..+|.++|+++++.|++++++|++++++|+||+. .++. ..|+..+++.+++++++.+. .+..
T Consensus 29 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~ 107 (427)
T 1o20_A 29 VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEV 107 (427)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCE
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCcc
Confidence 4778999999999999999999999999999999999885 4332 25899999999999987764 3443
Q ss_pred ecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----HcCCCCC
Q 013526 84 LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDG 156 (441)
Q Consensus 84 ~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~aglP~~ 156 (441)
.+. +.+...+.+++|+|||++|+||| +...++++++||++||+||+|||+.+|+++..|++++. ++|+|+|
T Consensus 108 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~g 185 (427)
T 1o20_A 108 IDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPES 185 (427)
T ss_dssp EEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGG
T ss_pred ccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 332 12445688999999999999875 47888999999999999999999999999999999998 6799999
Q ss_pred cEEEEeCC-chhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 157 VLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 157 ~v~~~~~~-~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
++|++++. ..+.+..|..||++|.|.||||+.+++.|.+.+ .+|+++|+|||||+||++|||++.|++.+++++|
T Consensus 186 vv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f 261 (427)
T 1o20_A 186 SVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKT 261 (427)
T ss_dssp GEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred cEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhc
Confidence 99999984 456788888899999999999999999998875 5999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 315 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 315 (441)
.|+| .|++++++|||+++||+|+++|++.+++++++ ++||...
T Consensus 262 ~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~- 304 (427)
T 1o20_A 262 QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT- 304 (427)
T ss_dssp SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH-
T ss_pred cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh-
Confidence 9999 99999999999999999999999999987653 1122211
Q ss_pred CCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEEEcC
Q 013526 316 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 395 (441)
Q Consensus 316 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~vN~ 395 (441)
.+ |+ ||| ++.++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+
T Consensus 305 -~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~ 378 (427)
T 1o20_A 305 -RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNA 378 (427)
T ss_dssp -HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESS
T ss_pred -hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECC
Confidence 12 33 886 2457889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhccEEEEeCC
Q 013526 396 YFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 396 ~~~~~~~~p~GG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
+....+..||||.|+||+| +++|++++++||+.|+|+++..
T Consensus 379 ~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 379 STRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp CGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred CCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 8777788999999999987 4679999999999999988764
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1e-72 Score=573.10 Aligned_cols=374 Identities=20% Similarity=0.213 Sum_probs=317.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh----hhhh-------ccHHHHHHHHHHHHHhhhhhcCce
Q 013526 15 TVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGAANTLRYYAGAADKIHGEV 83 (441)
Q Consensus 15 ~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~ 83 (441)
.|+.++..+|.++|+++++.|++++++|++++++|+||+.. ++.. .|+..+++.+++++.+.+.. +..
T Consensus 41 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~ 119 (444)
T 4ghk_A 41 SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEM 119 (444)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCE
T ss_pred HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-Ccc
Confidence 36688999999999999999999999999999999999853 3221 37899999999998877542 443
Q ss_pred ecc---ccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHH----HHcCCCCC
Q 013526 84 LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDG 156 (441)
Q Consensus 84 ~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l----~~aglP~~ 156 (441)
.+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++++ .++|+|+|
T Consensus 120 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~g 197 (444)
T 4ghk_A 120 SNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQD 197 (444)
T ss_dssp EEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred CCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcc
Confidence 332 23566789999999999999998 8 588899999999999999999999999999999997 79999999
Q ss_pred cEEEEeCCch-hHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHh
Q 013526 157 VLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 157 ~v~~~~~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~ 235 (441)
+++++++.+. ..+..|..||++|.|.||||+.+++.+.+.+ ++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 198 vv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~ 273 (444)
T 4ghk_A 198 TVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKT 273 (444)
T ss_dssp GEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----
T ss_pred cEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhc
Confidence 9999998554 4778888899999999999999999998764 6999999999999999999999999999999999
Q ss_pred hccCCCcccCceEEEeCccHHHHHHHHHHHHhcccc---CCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCC
Q 013526 236 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 312 (441)
Q Consensus 236 ~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 312 (441)
.|+| .|+++++||||+++|++|+++|++.++++++ |+|. ..++++++.
T Consensus 274 ~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~----------- 324 (444)
T 4ghk_A 274 HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG----------- 324 (444)
T ss_dssp ------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT-----------
T ss_pred CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc-----------
Confidence 9999 9999999999999999999999999999887 6542 134555432
Q ss_pred cCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhccceEEE
Q 013526 313 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 392 (441)
Q Consensus 313 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 392 (441)
.| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+
T Consensus 325 ----~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~ 392 (444)
T 4ghk_A 325 ----VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVM 392 (444)
T ss_dssp ----CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred ----cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEE
Confidence 11 11 3467899999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhccEEEEeCC
Q 013526 393 INCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIF 436 (441)
Q Consensus 393 vN~~~~~~~~~p~GG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~~ 436 (441)
||++....+..||||.++||+| +++|++++++||+.|+|+++.+
T Consensus 393 vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 393 VNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp EEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred EcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 9999887888999999999988 5789999999999999988754
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2e-71 Score=565.39 Aligned_cols=402 Identities=20% Similarity=0.245 Sum_probs=325.8
Q ss_pred CCCHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHH-HHHH
Q 013526 4 LPSRQHVRRLIT--------VHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR-YYAG 74 (441)
Q Consensus 4 ~~~~~~~~~a~~--------~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~-~~~~ 74 (441)
..+.+++++|++ |+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+.+.+. +++.
T Consensus 3 ~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~ 82 (452)
T 3my7_A 3 VTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKD 82 (452)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 467777777764 5678999999999999999999999999999999999999865456766666663 3322
Q ss_pred hhhhhcCceeccccccccceeecccceEEEECCCccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHH----H
Q 013526 75 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----L 150 (441)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~----~ 150 (441)
.+..+ .++...+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++. +
T Consensus 83 --~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~ 159 (452)
T 3my7_A 83 --EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVA 159 (452)
T ss_dssp --CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHH
T ss_pred --ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHH
Confidence 11111 2222345567889999999999999999999999999999999999999999999999988887765 7
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHH
Q 013526 151 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 230 (441)
Q Consensus 151 aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i 230 (441)
+|+|+|++|++++++.+.++.|+.||+++.|.||||+..++ .++ +.++|+++|+|||+|+||++|||++.|++.+
T Consensus 160 aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~i 234 (452)
T 3my7_A 160 AGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRAVASV 234 (452)
T ss_dssp TTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHHHHHH
T ss_pred cCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHHHHHH
Confidence 89999999999998888999999999999999999998643 333 7889999999999999999999999999999
Q ss_pred HHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecC
Q 013526 231 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 310 (441)
Q Consensus 231 ~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~g 310 (441)
++++|+|+||.|+++++||||+++||+|+++|+++ .||++++.++++++++++++...|+++ +|
T Consensus 235 v~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G 298 (452)
T 3my7_A 235 LMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VG 298 (452)
T ss_dssp HHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TT
T ss_pred HHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ec
Confidence 99999999999999999999999999999999875 389999999999999998776677776 47
Q ss_pred CCcC---CCCCceeecEE-------EeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCC----CCcEEEEecCCH
Q 013526 311 GKPI---GKKGYYIEPTI-------FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR----YGLAAGIMTKDL 376 (441)
Q Consensus 311 g~~~---~~~g~~~~Ptv-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~s~d~ 376 (441)
|... ...|+|++||+ +.++++++++++ |+||||++|++|+|++|||+++|++. |||+++|||+|.
T Consensus 299 ~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~ 377 (452)
T 3my7_A 299 QPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQD 377 (452)
T ss_dssp CCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTT
T ss_pred CccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCH
Confidence 6542 13689999997 567888999876 89999999999999999999999974 999999999998
Q ss_pred HHHHH---HHHhccceEEEEcCcCCCCCCCCccCCCCC-----------CCCCcchHH-----HHHhhhhccEEEEeCC
Q 013526 377 NVANT---VSRSIRAGIIWINCYFAFDSDCPYGGYKMS-----------GFGRDCGLE-----SLHNYLQVKSVVTPIF 436 (441)
Q Consensus 377 ~~~~~---~~~~l~~g~v~vN~~~~~~~~~p~GG~~~S-----------G~g~~~g~~-----~l~~~t~~k~v~~~~~ 436 (441)
+.+++ +++++++|+|+||++.. |||.|.. |+|..+|.. +.+++...|+|..+..
T Consensus 378 ~~a~~i~~~a~~l~~G~V~VN~~~~------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~ 450 (452)
T 3my7_A 378 VNADRIRYFGDKMKTARILINIPTT------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAE 450 (452)
T ss_dssp TCHHHHHHHHHHCCCSEEEESCCCC----------------------------------CCCCCGGGGEEEEEEECCC-
T ss_pred HHHHHHHHHHHhCCEEEEEECCCCC------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeecC
Confidence 87777 99999999999999754 5554432 445555444 5566666676665544
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=98.25 E-value=0.0017 Score=63.21 Aligned_cols=339 Identities=17% Similarity=0.169 Sum_probs=184.0
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC-Ch---hh--hhhccH---------------HHHH
Q 013526 8 QHVRRLITVHGHVFLEPRGIMLKFADLIEEHAEVLAVLEALDAGK-LH---SW--AKMGDI---------------PGAA 66 (441)
Q Consensus 8 ~~~~~a~~~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk-~~---~~--~~~~ev---------------~~~~ 66 (441)
+++++.+.+...+..+-.+....+.+.++++-|+=+...++..-+ .. .+ ....|+ ..+.
T Consensus 19 ~~l~~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~ 98 (423)
T 4gic_A 19 SQLDRLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAA 98 (423)
T ss_dssp HHHHHHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHH
Confidence 366777767666666666777777777777766655555554321 10 00 011123 2233
Q ss_pred HHHHHHHHhhhhhcCceeccccccccceeecccceEEEECCC---ccchHhhHHHHHHHHhhCCeE-EE-eCCCcchHHH
Q 013526 67 NTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTM-IV-KPAEQTPLIA 141 (441)
Q Consensus 67 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~AL~aGn~v-v~-kps~~~~~~~ 141 (441)
+.++.|..... .........+|......+.|+--|.++.|. .||-.. +...+||-.+|..= |+ .|++.. ...
T Consensus 99 ~~I~~fh~~Q~-~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~G-~i~ 175 (423)
T 4gic_A 99 ERIRAYAERQK-LDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPRG-ELN 175 (423)
T ss_dssp HHHHHHHHHHC-CCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGGG-CCC
T ss_pred HHHHHHHHhcc-cCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCCC-Ccc
Confidence 33333332111 111122334677778899999999999994 355433 44589999999973 33 343321 122
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHh----CCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceee
Q 013526 142 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 217 (441)
Q Consensus 142 ~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~----~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV 217 (441)
..+.-+...+|.. .+..-.|.....+|.- -|.||.|+=.|..-++.. +... ....-+=+ ..|.+=+.|
T Consensus 176 p~iL~AA~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g~VgIDm-~AGPSEilV 247 (423)
T 4gic_A 176 ALVLAAAYISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FGQVGIDM-VAGPSEILV 247 (423)
T ss_dssp HHHHHHHHHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BTTBEECC-CCCCCEEEE
T ss_pred HHHHHHHHhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cCCcCccc-ccccceEEE
Confidence 2333344456654 3444346555555554 678999999999876542 2222 11111112 233333333
Q ss_pred --cCCCCHHHHHHHHHHHHhhccCCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHH
Q 013526 218 --FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 295 (441)
Q Consensus 218 --~~dad~~~aa~~i~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~ 295 (441)
++++|.+..|..++.-+=+.. ..+.++|..+ ++|.+++.+.+.+..-.-| .. +.+
T Consensus 248 iAD~~a~p~~vAaDLlsQAEHd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r~---~i~-- 304 (423)
T 4gic_A 248 ISDGRTDPDWIAMDLFSQAEHDE-----DAQAILISPD--AAHLEAVQASIERLLPGME-----------RA---EVI-- 304 (423)
T ss_dssp EECSCSCHHHHHHHHHHHHTTCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------TH---HHH--
T ss_pred EeCCCCCHHHHHHHHHHhhccCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------cH---HHH--
Confidence 456899999998887654433 2456777766 4555555555543211111 11 111
Q ss_pred HHHHHHHcCCeEecCCCcCCCCCceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCC
Q 013526 296 YIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 375 (441)
Q Consensus 296 ~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d 375 (441)
..+..+ + -.++.++|++|+++++|..- .-..-|.++|
T Consensus 305 --~~sl~~-------------------------------------~---g~ii~v~~~~ea~~~~N~~A-PEHLel~~~~ 341 (423)
T 4gic_A 305 --RTSLER-------------------------------------R---GGMILVDDLEQAAAVANRIA-PEHLELSVES 341 (423)
T ss_dssp --HHHHHH-------------------------------------H---CEEEECSSHHHHHHHHHHHC-CSEEEEESSC
T ss_pred --HHHHhc-------------------------------------C---ceEEEEeehHHHHHHHHhhC-hHHhhhhhCC
Confidence 112211 1 12446799999999999842 2356788888
Q ss_pred HHHHHHHHHhcc-ceEEEEcCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 376 LNVANTVSRSIR-AGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 376 ~~~~~~~~~~l~-~g~v~vN~~~~---------~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
+ ..+..+++ +|.|++..++. .+..+|. +|..++.+.-+...|.++-++
T Consensus 342 ~---~~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 342 P---EVLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp H---HHHGGGCCCCSEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEEE
T ss_pred H---HHHHhhCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeE
Confidence 7 45777775 99999987654 1233455 445555555567777775443
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.70 E-value=0.045 Score=53.40 Aligned_cols=261 Identities=20% Similarity=0.205 Sum_probs=151.4
Q ss_pred cccccceeecccceEEEECCC---ccchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013526 88 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 164 (441)
Q Consensus 88 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~ 164 (441)
.|......+.|+.-|.++.|. -||- +.+...+||-.+|+.=|+--+|-. ....+.-+...+|.. .+..-.
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~----eIy~vG 185 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQ----DVFNVG 185 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCC----EEEECC
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCC----EEeecc
Confidence 466777889999999999995 3553 344468999999997665333311 112233334556655 333333
Q ss_pred chhHHHHHHh----CCCcCEEEEeCCcHHHHHHHHHHhhcCCCceeeecCCCCceee--cCCCCHHHHHHHHHHHHhhcc
Q 013526 165 GPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI--FDDVDVNTAADMALLGILFNK 238 (441)
Q Consensus 165 ~~~~~~~l~~----~~~v~~v~ftGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV--~~dad~~~aa~~i~~~~~~~~ 238 (441)
|.....+|.- -|.||.|.=.|..-+...=+.... ..+.--+=-..|.+=+.| ++++|.+..|..++.-+=+..
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~-~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH-CTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh-hcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 5555455543 588999998888765432221100 111111112234443333 456899999998887654333
Q ss_pred CCCcccCceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHHcCCeEecCCCcCCCCC
Q 013526 239 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 318 (441)
Q Consensus 239 Gq~C~~~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g 318 (441)
..+.++|..+ ++|.+++.+.+.+..-.-| .. +.++.++
T Consensus 265 -----~a~aiLvT~s--~~la~~V~~ev~~ql~~lp-----------r~-------~ia~~sl----------------- 302 (434)
T 1kae_A 265 -----DSQVILLTPA--ADMARRVAEAVERQLAELP-----------RA-------ETARQAL----------------- 302 (434)
T ss_dssp -----TCEEEEEESC--HHHHHHHHHHHHHHHTTCT-----------TH-------HHHHHHH-----------------
T ss_pred -----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------hH-------HHHHHHH-----------------
Confidence 2456677666 3455555444433210001 11 1111111
Q ss_pred ceeecEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHHhcc-ceEEEEcCcC
Q 013526 319 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWINCYF 397 (441)
Q Consensus 319 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~v~vN~~~ 397 (441)
..- .|+.++|++||++++|..- .-..-|.++|+ ..+..+++ +|.|++..++
T Consensus 303 -----------------------~~~-~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp---~~~l~~I~nAGaIFlG~~t 354 (434)
T 1kae_A 303 -----------------------NAS-RLIVTKDLAQCVEISNQYG-PEHLIIQTRNA---RELVDSITSAGSVFLGDWS 354 (434)
T ss_dssp -----------------------TTC-EEEECSSHHHHHHHHHHHC-CSEEEEESTTH---HHHGGGCCSCSEEEESTTC
T ss_pred -----------------------HcC-eEEEECCHHHHHHHHHHhh-hHhhhhhhcCH---HHHHhhcCcccchhcCCCC
Confidence 112 4667899999999999842 23677889887 46677775 8999999875
Q ss_pred C---------CCCCCCccCCCCCCCCCcchHHHHHhhhhccEE
Q 013526 398 A---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 431 (441)
Q Consensus 398 ~---------~~~~~p~GG~~~SG~g~~~g~~~l~~~t~~k~v 431 (441)
. .+..+|-+| ..++.+.-+.+.|+++-++
T Consensus 355 pe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 355 PESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp CHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEE
T ss_pred chhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeE
Confidence 5 234566655 4444445566777776543
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=66.80 E-value=7 Score=34.79 Aligned_cols=65 Identities=11% Similarity=0.157 Sum_probs=45.4
Q ss_pred HHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcH
Q 013526 116 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 188 (441)
Q Consensus 116 ~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~ 188 (441)
+..++..+.+||-||++.++ +.....+..+|... +|.+++.+.+. +++- ...-..+.+.++.+..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~-s~~Y----~~~~~cnilgls~~v~ 85 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPY-SSQY----EEAYRCNFLGLSPHVQ 85 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEE-ESSC----CCTTTCSEEEECTTCC
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhcccc-chhh----cchhheeeecCCCCcc
Confidence 45678889999999999987 55666677778888 99999999865 2221 1122345666666544
No 56
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=60.15 E-value=27 Score=29.78 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=31.5
Q ss_pred hhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013526 124 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 164 (441)
Q Consensus 124 ~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~ 164 (441)
.+||-+|+|..|-. +..++.++...++|++++-.+-|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 37999999977654 688888888888999899999884
No 57
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=56.42 E-value=24 Score=29.26 Aligned_cols=115 Identities=17% Similarity=0.123 Sum_probs=70.6
Q ss_pred ceEEEECCCc-cchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeC-CchhHHHHHHhCCC
Q 013526 100 GVVGHIIPWN-FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG-FGPTAGAAIASHMD 177 (441)
Q Consensus 100 Gvv~~i~p~n-~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~-~~~~~~~~l~~~~~ 177 (441)
|.++++...+ =+-...+..-...++.|..++- +.-|+..|.+ ..|+|...++=++. .++.+.+.+ ....
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa~~L~e---~~Gl~v~~v~k~~eGG~p~I~d~I-~~ge 82 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTGNLISR---ATGMNVNAMLSGPMGGDQQVGALI-SEGK 82 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHHHHHHH---HHCCCCEEECCGGGTHHHHHHHHH-HTTC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHHHHHHH---HhCceeEEEEecCCCCCchHHHHH-HCCC
Confidence 6555554433 3444445556667778888775 2344444433 17999765553332 233344444 5567
Q ss_pred cCEEEEeCC-------cHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccC
Q 013526 178 IDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 239 (441)
Q Consensus 178 v~~v~ftGs-------~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~G 239 (441)
++.|+||-+ ...+..|++.+. ....|+..-+ ..|+.++.+..++..
T Consensus 83 IdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 83 IDVLIFFWDPLNAVPHDPDVKALLRLAT-VWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCEEEEECCTTSCCTTHHHHHHHHHHHH-HTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred ccEEEEcCCcccCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 999999877 456777888877 5666766543 567777877777764
No 58
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=50.85 E-value=55 Score=25.86 Aligned_cols=73 Identities=12% Similarity=0.213 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHcCCeEecCCC-cCCCCCceee-----cEEEeeCCCCccccccccccceEEEEEeCCHHHHHHHHh
Q 013526 288 KQFDRILSYIEHGKREGATLLTGGK-PIGKKGYYIE-----PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSAN 361 (441)
Q Consensus 288 ~~~~~~~~~i~~a~~~ga~v~~gg~-~~~~~g~~~~-----Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 361 (441)
...+...++.++..+.|. ++.|+. .+...+..+. |+|.+++-.+ .+|..|= +.|+.++|.+||++++.
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~ 103 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAA 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHH
Confidence 345556666777666673 333322 2112232222 3444333222 2344442 67789999999999999
Q ss_pred cCCCC
Q 013526 362 NTRYG 366 (441)
Q Consensus 362 ~~~~g 366 (441)
..+..
T Consensus 104 ~~P~~ 108 (124)
T 1s7i_A 104 KIPPG 108 (124)
T ss_dssp TCGGG
T ss_pred hCCcc
Confidence 87653
No 59
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=45.05 E-value=27 Score=29.70 Aligned_cols=115 Identities=16% Similarity=0.085 Sum_probs=72.1
Q ss_pred ceEEEECCCc-cchHhhHHHHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeC-CchhHHHHHHhCCC
Q 013526 100 GVVGHIIPWN-FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG-FGPTAGAAIASHMD 177 (441)
Q Consensus 100 Gvv~~i~p~n-~P~~~~~~~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~-~~~~~~~~l~~~~~ 177 (441)
|.++++...+ =+-...+.+-...+++|..++- +.-|+..|.+. .|+|...++=++. .++.+.+.+ ....
T Consensus 28 g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~L~e~---~Gl~v~~v~k~~eGG~pqI~d~I-~~ge 98 (178)
T 1vmd_A 28 KRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGALLQEK---LGLKVHRLKSGPLGGDQQIGAMI-AEGK 98 (178)
T ss_dssp CEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHHHHHH---HCCCCEECSCGGGTHHHHHHHHH-HTTS
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHHHHHH---hCceeEEEeecCCCCCchHHHHH-HCCC
Confidence 7666555544 3444555566667778998764 34555444431 7999665543332 123344444 5567
Q ss_pred cCEEEEeCC-------cHHHHHHHHHHhhcCCCceeeecCCCCceeecCCCCHHHHHHHHHHHHhhccC
Q 013526 178 IDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 239 (441)
Q Consensus 178 v~~v~ftGs-------~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iV~~dad~~~aa~~i~~~~~~~~G 239 (441)
++.|+||-+ ...+..|++.+. ....|+..-+ ..|+.++.+.+++..
T Consensus 99 IdlVInt~dPl~~~~h~~D~~~IRR~A~-~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 99 IDVLIFFWDPLEPQAHDVDVKALIRIAT-VYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp CCEEEEECCSSSCCTTSCCHHHHHHHHH-HTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred ccEEEEccCccCCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 999999977 345677888877 5666766543 567788888877764
No 60
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=44.96 E-value=82 Score=26.49 Aligned_cols=37 Identities=22% Similarity=0.379 Sum_probs=29.5
Q ss_pred hhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013526 124 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 164 (441)
Q Consensus 124 ~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~ 164 (441)
.+||-+|+|..|-. +..++.++...++| +++-.+-|+
T Consensus 110 ~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 110 DSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 47999999987654 68888888888776 688888774
No 61
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=39.58 E-value=1.1e+02 Score=22.85 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=18.8
Q ss_pred ceEEEEEeCCHHHHHHHHhcCC
Q 013526 343 PVMALMKFKTVEEAIKSANNTR 364 (441)
Q Consensus 343 Pvl~v~~~~~~~eai~~~n~~~ 364 (441)
+-+.|+.|+|.++|.++.|+-+
T Consensus 54 ~~~viieFpS~~aa~~~~~s~~ 75 (99)
T 2fiu_A 54 ARNVVIEFPSVQHAIDCYNSPE 75 (99)
T ss_dssp SEEEEEEESSHHHHHHHHHSHH
T ss_pred CeEEEEECCCHHHHHHHHcCHH
Confidence 3688999999999999998643
No 62
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=29.83 E-value=60 Score=26.30 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=41.7
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhHHHHHHhCCCcCEEEEeCCc-----HHHHHHHHHHhhcCCCceeeec
Q 013526 145 AHLAKLAGVPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRQVMQAAATSNLKPVSLEL 209 (441)
Q Consensus 145 ~~~l~~aglP~~~v~~~~~~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~~~~v~~~~a~~~~~~~~~e~ 209 (441)
++.|++.|+|...++-++.. . +.+.+.+.. ..++.|++|-+. ..+..+++.+. ....|++...
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR~Av-~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRRTAV-DSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHHHHH-HTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHHHHH-HhCCCeEcCH
Confidence 34556789997766655532 2 455555544 579999998765 36677788776 6667776543
No 63
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=25.04 E-value=34 Score=27.63 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=46.6
Q ss_pred HHHHHHhhCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEe-CCchhHHHHHHhCCCcCEEEEeCC-------cHH
Q 013526 118 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS-------TDV 189 (441)
Q Consensus 118 ~i~~AL~aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~-~~~~~~~~~l~~~~~v~~v~ftGs-------~~~ 189 (441)
.-...++.|..++- +.-|+..|.+. .|++...++=++ +.++.+.+.+ ....++.|+||-+ ...
T Consensus 23 ~~~~~ll~Gf~l~A-----T~gTa~~L~e~---~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl~~~~h~~D 93 (134)
T 2xw6_A 23 QRHREVLARFPLVA-----TGTTGRRIEEA---TGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPLTAQPHEPD 93 (134)
T ss_dssp HHTHHHHTTSCEEE-----CHHHHHHHHHH---HCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTTTCCTTSCC
T ss_pred HHHHHHhCCCEEEE-----ccHHHHHHHHh---hCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcccCCCccch
Confidence 33445556666553 34444444431 799976665444 4234455555 5567999999987 234
Q ss_pred HHHHHHHHhhcCCCceee
Q 013526 190 GRQVMQAAATSNLKPVSL 207 (441)
Q Consensus 190 ~~~v~~~~a~~~~~~~~~ 207 (441)
+..|++.+. ....|+..
T Consensus 94 ~~~IrR~A~-~~~IP~~T 110 (134)
T 2xw6_A 94 VQALLRVCD-VHGVPLAT 110 (134)
T ss_dssp SHHHHHHHH-HHTCCEEC
T ss_pred HHHHHHHHH-HcCCCeEc
Confidence 566777766 44456554
No 64
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=24.21 E-value=1.2e+02 Score=25.35 Aligned_cols=51 Identities=20% Similarity=0.018 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH---hCCCcCEEEEeCCcHH
Q 013526 139 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA---SHMDIDKVSFTGSTDV 189 (441)
Q Consensus 139 ~~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~---~~~~v~~v~ftGs~~~ 189 (441)
....+|.+.|.+.|+.--...+++.+...+..++. .....|.|+.||+...
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 45678899999999876555666654344444443 3456899999998763
No 65
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=23.84 E-value=91 Score=25.85 Aligned_cols=49 Identities=18% Similarity=0.229 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHhC--CCcCEEEEeCCcHH
Q 013526 140 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDV 189 (441)
Q Consensus 140 ~~~~l~~~l~~aglP~~~v~~~~~~~~~~~~~l~~~--~~v~~v~ftGs~~~ 189 (441)
....|.+.+++.|+..-...+++.+ ..+.+.|... .+.|.|+.||+...
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~ 78 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGI 78 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4467788888999876667777776 6666665432 35899999998764
No 66
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=22.15 E-value=88 Score=24.53 Aligned_cols=80 Identities=11% Similarity=0.166 Sum_probs=46.0
Q ss_pred HHHHHHhhccCCCccc--CceEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCcc-------cccCHHHHHHHHHHHHH
Q 013526 229 MALLGILFNKGEICVA--SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG-------PQVDKKQFDRILSYIEH 299 (441)
Q Consensus 229 ~i~~~~~~~~Gq~C~~--~~~v~V~~~~~~~f~~~L~~~~~~~~~g~~~~~~~~~g-------pl~~~~~~~~~~~~i~~ 299 (441)
..+.......+-.|.. ....+++.+.++++.+.+.+.+..+.--.|..++..-. |-.+..- +...++.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~---~~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARV---YQALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHH---HHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHH---HHHHHHH
Confidence 3333333334434443 23448999999999999999998865455554432211 2223333 3456677
Q ss_pred HHHcCCeEecCC
Q 013526 300 GKREGATLLTGG 311 (441)
Q Consensus 300 a~~~ga~v~~gg 311 (441)
..++|.....|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 777775555444
No 67
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=21.56 E-value=4.2e+02 Score=24.33 Aligned_cols=103 Identities=16% Similarity=0.120 Sum_probs=56.9
Q ss_pred EEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeC--Cch--hHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHhh---cC
Q 013526 129 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG--FGP--TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT---SN 201 (441)
Q Consensus 129 vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~--~~~--~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a~---~~ 201 (441)
+|+.|....-.....+.+.+.+.|.. +.+... .++ +....+.. ...|.|+..|++.+...+...+.. ..
T Consensus 34 vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~~ 109 (332)
T 2bon_A 34 LILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGDD 109 (332)
T ss_dssp EEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSSC
T ss_pred EEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccCC
Confidence 45555544333344566777777765 333332 121 11122222 247899999999999998888752 12
Q ss_pred CCcee-eecCCCC-cee-ecCCCCHHHHHHHHHHHHh
Q 013526 202 LKPVS-LELGGKS-PLL-IFDDVDVNTAADMALLGIL 235 (441)
Q Consensus 202 ~~~~~-~e~gg~~-~~i-V~~dad~~~aa~~i~~~~~ 235 (441)
..|+- +-+|--| -+- +.-..|++.+++.++.+..
T Consensus 110 ~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 110 IPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 33432 3344444 221 2214578999998887654
No 68
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=20.86 E-value=78 Score=25.22 Aligned_cols=43 Identities=14% Similarity=0.053 Sum_probs=27.7
Q ss_pred CcEEEEeCCchhHHHHHHhCCCcCEEEEeCCcHHHHHHHHHHh
Q 013526 156 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 198 (441)
Q Consensus 156 ~~v~~~~~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~v~~~~a 198 (441)
+.+++++|+.++........+++.++++||+......+.+.+.
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~ 95 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAE 95 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHH
Confidence 4677777765544433333256888999998776667666554
No 69
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=20.01 E-value=2e+02 Score=20.44 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=28.9
Q ss_pred hCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013526 125 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 164 (441)
Q Consensus 125 aGn~vv~kps~~~~~~~~~l~~~l~~aglP~~~v~~~~~~ 164 (441)
++|-+|+|..|-. +..++.++.+.++|+ ++..+-|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999987644 688888898887776 88888774
Done!