BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013527
(441 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 2)
Length = 439
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 186/436 (42%), Gaps = 34/436 (7%)
Query: 6 KVKITSKTHVKPSKVIGRRECQLVTFDLPYLFFYYNQKLLLYRNGDREFHDAVEKLKDGL 65
K+++ T V+P++ R DL F+ G F DA + LKD L
Sbjct: 7 KIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDA-KVLKDAL 65
Query: 66 KHVLEEFYQLAGKLGKDEEGVFRVEYXXXXXXXXXXXXXXXXXXXXXLTAEEGTKSFKEL 125
L FY +AG+L +DE+G +E T + L
Sbjct: 66 SRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAP---TLELRRL 122
Query: 126 IPYYGVLNLEG-THRPLLALQLTKLK-DGMAIGCAFNHAILDGTSTWHFMSSWAQACNGA 183
IP V +G + LL LQ+T K G+++G H DG S HF++SW+ G
Sbjct: 123 IP--AVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARG- 179
Query: 184 TSVSVPPFLERTKSRNTRVKLDPSL------PPDPHSQSSGDAAAKQEPVLREKVFKFSE 237
V++PPF++RT R R P PP + S AA+ P +FK +
Sbjct: 180 LDVTLPPFIDRTLLR-ARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTR 238
Query: 238 AAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRV 297
I +K+K E+G + +S+++ LA H+WR AR L+ + T + D R R+
Sbjct: 239 EQISALKAKSKEDG---NTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARL 295
Query: 298 DPPMPDSYFGNLIQAIFTVTAAGLLTGNPPEFGASMIQKAIEAHTAKAIDERNEGWENAP 357
P +P YFGN+I + AG L P + AS I A+ + + E P
Sbjct: 296 RPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQP 355
Query: 358 KI---------FQFKDAGVNCVAVGSSPRFKVYEVDFGWGKPESVRSGSNNRFDGMVYLY 408
+ F+ + G+ S R +++ DFGWG+P + G ++G+ ++
Sbjct: 356 DLKALVRGAHTFKXPNLGIT-----SWVRLPIHDADFGWGRPIFMGPG-GIAYEGLSFIL 409
Query: 409 QGKSGGRSIDVEITLE 424
+ S+ V I+L+
Sbjct: 410 PSPTNDGSMSVAISLQ 425
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
pdb|4G22|B Chain B, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
Length = 439
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 186/436 (42%), Gaps = 34/436 (7%)
Query: 6 KVKITSKTHVKPSKVIGRRECQLVTFDLPYLFFYYNQKLLLYRNGDREFHDAVEKLKDGL 65
K+++ T V+P++ R DL F+ G F DA + LKD L
Sbjct: 7 KIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDA-KVLKDAL 65
Query: 66 KHVLEEFYQLAGKLGKDEEGVFRVEYXXXXXXXXXXXXXXXXXXXXXLTAEEGTKSFKEL 125
L FY +AG+L +DE+G +E T + L
Sbjct: 66 SRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAP---TLELRRL 122
Query: 126 IPYYGVLNLEG-THRPLLALQLTKLKDG-MAIGCAFNHAILDGTSTWHFMSSWAQACNGA 183
IP V +G + LL LQ+T K G +++G H DG S HF++SW+ G
Sbjct: 123 IP--AVDYSQGISSYALLVLQVTYFKXGGVSLGVGMRHHAADGFSGLHFINSWSDMARG- 179
Query: 184 TSVSVPPFLERTKSRNTRVKLDPSL------PPDPHSQSSGDAAAKQEPVLREKVFKFSE 237
V++PPF++RT R R P PP + S AA+ P +FK +
Sbjct: 180 LDVTLPPFIDRTLLR-ARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTR 238
Query: 238 AAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRV 297
I +K+K E+G + +S+++ LA H+WR AR L+ + T + D R R+
Sbjct: 239 EQISALKAKSKEDG---NTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARL 295
Query: 298 DPPMPDSYFGNLIQAIFTVTAAGLLTGNPPEFGASMIQKAIEAHTAKAIDERNEGWENAP 357
P +P YFGN+I + AG L P + AS I A+ + + E P
Sbjct: 296 RPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQP 355
Query: 358 KI---------FQFKDAGVNCVAVGSSPRFKVYEVDFGWGKPESVRSGSNNRFDGMVYLY 408
+ F+ + G+ S R +++ DFGWG+P + G ++G+ ++
Sbjct: 356 DLKALVRGAHTFKXPNLGIT-----SWVRLPIHDADFGWGRPIFMGPG-GIAYEGLSFIL 409
Query: 409 QGKSGGRSIDVEITLE 424
+ S+ V I+L+
Sbjct: 410 PSPTNDGSMSVAISLQ 425
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora
pdb|4G0B|B Chain B, Structure Of Native Hct From Coffea Canephora
Length = 436
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 182/431 (42%), Gaps = 24/431 (5%)
Query: 6 KVKITSKTHVKPSKVIGRRECQLVTFDLPYLFFYYNQKLLLYRNGDREFHDAVEKLKDGL 65
K+++ T V+P++ R DL F+ G F DA + LKD L
Sbjct: 4 KIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDA-KVLKDAL 62
Query: 66 KHVLEEFYQLAGKLGKDEEGVFRVEYXXXXXXXXXXXXXXXXXXXXXLTAEEGTKSFKEL 125
L FY +AG+L +DE+G +E T + L
Sbjct: 63 SRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAP---TLELRRL 119
Query: 126 IPYYGVLNLEG-THRPLLALQLTKLK-DGMAIGCAFNHAILDGTSTWHFMSSWAQACNGA 183
IP V +G + LL LQ+T K G+++G H DG S HF++SW+ G
Sbjct: 120 IP--AVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARG- 176
Query: 184 TSVSVPPFLERTKSRNTRVKLDPSL------PPDPHSQSSGDAAAKQEPVLREKVFKFSE 237
V++PPF++RT R R P PP S A + P +FK +
Sbjct: 177 LDVTLPPFIDRTLLR-ARDPPQPQFQHIEYQPPPALKVSPQTAKSDSVPETAVSIFKLTR 235
Query: 238 AAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRV 297
I +K+K E+G + +S+++ LA H+WR AR L+ + T + D R R+
Sbjct: 236 EQISALKAKSKEDG---NTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARL 292
Query: 298 DPPMPDSYFGNLIQAIFTVTAAGLLTGNPPEFGASMIQKAIEAHTAKAIDERNEGWENAP 357
P +P YFGN+I + AG L P + AS I A+ + + E P
Sbjct: 293 RPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQP 352
Query: 358 KIFQFKDAG--VNCVAVG--SSPRFKVYEVDFGWGKPESVRSGSNNRFDGMVYLYQGKSG 413
+ C +G S R +++ DFGWG+P + G ++G+ ++ +
Sbjct: 353 DLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPG-GIAYEGLSFILPSPTN 411
Query: 414 GRSIDVEITLE 424
S+ V I+L+
Sbjct: 412 DGSMSVAISLQ 422
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1T|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1U|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
pdb|2E1U|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Length = 454
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 186/466 (39%), Gaps = 63/466 (13%)
Query: 1 MAEITKVKITSKTHVKPS-KVIGRRECQLVTFDLPYL--------FFYYNQKLLLYRNGD 51
MA + + + ++ V P +G + QL FD +L FFY +L + R+
Sbjct: 1 MASLPILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFY---ELPITRSQF 57
Query: 52 REFHDAVEKLKDGLKHVLEEFYQLAGKLGKDEEGVFRVEYXXXXXXXXXXXXXXXXXXXX 111
E V +K L L+ FY GKL + E
Sbjct: 58 TE--TVVPNIKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLN 115
Query: 112 XLTAEE--GTKSFKELIPYYGVLNLEGTHR------PLLALQLTKLKD-GMAIGCAFNHA 162
LT F +L+P G E T PL ++Q+T + G+AIG +H
Sbjct: 116 ELTGNHPRNCDKFYDLVPILG----ESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHC 171
Query: 163 ILDGTSTWHFMSSW---AQACNGATS------------VSVPPFLERTKSRNTRVKLDPS 207
+ D ++ + F+ +W A++ N S + P L+ + +V+ S
Sbjct: 172 LGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDRIIKYPMLDEAYLKRAKVE---S 228
Query: 208 LPPDPHSQSSGDAAAKQEPVLREKVFKFSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAV 267
D +QS + K LR F + A I+++K +V P+ + S+F
Sbjct: 229 FNEDYVTQSLAGPSDK----LR-ATFILTRAVINQLKDRVLAQLPT--LEYVSSFTVACA 281
Query: 268 HIWRHVTHARSLKPEDYTVFTVFADCRKRVDPPMPDSYFGNLIQAIFTVTAAGLLTGNPP 327
+IW + +R+ K + +F D R R+ PP+P +YFGN + + LL G
Sbjct: 282 YIWSCIAKSRNDKLQ---LFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKE- 337
Query: 328 EFGASMIQKAIEAHTAKAIDERNEGW--ENAPKIFQFKDAGV--NCVAVGSSPRFKVYEV 383
G K I + K + + +G ++ G+ V +P+ + Y++
Sbjct: 338 --GFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGMPTTMTWVSGTPKLRFYDM 395
Query: 384 DFGWGKPESVRSGSNNRFDGMVYLYQGKSGGRSIDVEITLEPGAME 429
DFGWGKP+ + + S + +G + + K +++ + + ME
Sbjct: 396 DFGWGKPKKLETVSIDH-NGAISINSCKESNEDLEIGVCISATQME 440
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
pdb|2E1V|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
Length = 454
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 175/447 (39%), Gaps = 58/447 (12%)
Query: 17 PSKVIGRRECQLVTFDLPYL--------FFYYNQKLLLYRNGDREFHDAVEKLKDGLKHV 68
P +G + QL FD +L FFY +L + R+ E V +K L
Sbjct: 18 PPDTLGDKSLQLTFFDFFWLRSPPINNLFFY---ELPITRSQFTE--TVVPNIKHSLSIT 72
Query: 69 LEEFYQLAGKLGKDEEGVFRVEYXXXXXXXXXXXXXXXXXXXXXLTAEE--GTKSFKELI 126
L+ FY GKL + E LT F +L+
Sbjct: 73 LKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLV 132
Query: 127 PYYGVLNLEGTHR------PLLALQLTKLKD-GMAIGCAFNHAILDGTSTWHFMSSW--- 176
P G E T PL ++Q+T + G+AIG +H + D ++ + F+ +W
Sbjct: 133 PILG----ESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSI 188
Query: 177 AQACNGATSV---SVPPFLERT-------KSRNTRVKLDPSLPPDPHSQSSGDAAAKQEP 226
A++ N S P +R ++ R K++ S D +QS + K
Sbjct: 189 ARSGNNDESFLANGTRPLYDRIIKYPXLDEAYLKRAKVE-SFNEDYVTQSLAGPSDK--- 244
Query: 227 VLREKVFKFSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTV 286
LR F + A I+++K +V P+ + S+F +IW + +R+ K + +
Sbjct: 245 -LR-ATFILTRAVINQLKDRVLAQLPT--LEYVSSFTVACAYIWSCIAKSRNDKLQ---L 297
Query: 287 FTVFADCRKRVDPPMPDSYFGNLIQAIFTVTAAGLLTGNPPEFGASMIQKAIEAHTAKAI 346
F D R R PP+P +YFGN + + LL G G K I + K +
Sbjct: 298 FGFPIDRRARXKPPIPTAYFGNCVGGCAAIAKTNLLIGKE---GFITAAKLIGENLHKTL 354
Query: 347 DERNEGW--ENAPKIFQFKDAG--VNCVAVGSSPRFKVYEVDFGWGKPESVRSGSNNRFD 402
+ +G ++ G V +P+ + Y+ DFGWGKP+ + + S + +
Sbjct: 355 TDYKDGVLKDDXESFNDLVSEGXPTTXTWVSGTPKLRFYDXDFGWGKPKKLETVSIDH-N 413
Query: 403 GMVYLYQGKSGGRSIDVEITLEPGAME 429
G + + K +++ + + E
Sbjct: 414 GAISINSCKESNEDLEIGVCISATQXE 440
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase
pdb|2BGH|B Chain B, Crystal Structure Of Vinorine Synthase
Length = 421
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 147/384 (38%), Gaps = 53/384 (13%)
Query: 21 IGRRECQLVTFDLPYLFFYYNQKLLLYRNGDREFHDAVEKLKDGLKHVLEEFYQLAGKLG 80
I + L+T +P++ FY N + + + + LK L VL FY LAG++
Sbjct: 28 ISHLDQLLLTCHIPFILFYPNP-----LDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82
Query: 81 KD------EEGVFRVEYXXXXXXXXXXXXXXXXXXXXXLTAEEGTKSFKELIPYYGVLNL 134
+ + GV VE + E + Y G +
Sbjct: 83 VNSSVDCNDSGVPFVE---------ARVQAQLSQAIQNVVELEKLDQYLPSAAYPGG-KI 132
Query: 135 EGTHRPLLALQLTKLK-DGMAIGCAFNHAILDGTSTWHFMSSWAQACNGATSVSVPPF-L 192
E LA++++ + G AIG +H I D S F+++W C G T + +P F L
Sbjct: 133 EVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETEIVLPNFDL 192
Query: 193 ERTKSRNTRVKLDPSLPPDPHSQSSGDAAAKQEPVLREKVFKFSEAAIDKIKSKVNENGP 252
P L PD E V+ ++ F F + I ++++ +
Sbjct: 193 AARHFPPVDNTPSPELVPD-------------ENVVMKR-FVFDKEKIGALRAQASS--- 235
Query: 253 SDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVF--ADCRKRVDPPMPDSYFGNLI 310
+ K FS Q + +IW+HV K F V + R R++PP+P GN+
Sbjct: 236 ASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIA 295
Query: 311 QAIFTVTAAGLLTGNPPEFGA--SMIQKAIEAHTAKAIDERNEGWENAPKIFQFKDAGVN 368
+F A P G + ++K + H + + +E P+
Sbjct: 296 TLLFAAVDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELEPQ---------E 346
Query: 369 CVAVGSSPRFKVYEVDFGWGKPES 392
++ S R Y++DFGWGKP S
Sbjct: 347 LLSFTSWCRLGFYDLDFGWGKPLS 370
>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase
(Ntmat1) Complexed With Malonyl-Coa
Length = 453
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 151/401 (37%), Gaps = 34/401 (8%)
Query: 28 LVTFDLPYLFFYYNQKLLLYR---NGDREFHDAVEKLKDGLKHVLEEFYQLAGKLG--KD 82
L FD +L F+ +++L Y+ + + LKD L L+ + LAG + +D
Sbjct: 24 LTYFDHVWLAFHRXRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACPQD 83
Query: 83 EEGVFRVEYXXXXXXXXXXXXXXXXXXXXXLTAEEGTKSFKELIPYYG-VLNLEGTH-RP 140
G + Y TK F +P + G P
Sbjct: 84 WSGYPELRYVTGNSVSVIFSESDXDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAP 143
Query: 141 LLALQLTKLKD-GMAIGCAFNHAILDGTSTWHFMSSWAQACNGA-----TSVSVPPFLER 194
+LA+Q+T + G++IG +H DG + F+ +WA + PF +R
Sbjct: 144 VLAIQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDR 203
Query: 195 TKSRNTR---VKLDPSLPPDPHSQSSGDAAAKQEPVLREKVFKFSEAAIDKIKSKVNENG 251
+ ++ + H D + V F + I K+K+ V
Sbjct: 204 SVIKDPNGVGXSIWNEXKKYKHXXKXSDVVTPPDKV--RGTFIITRHDIGKLKNLVLTRR 261
Query: 252 PSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYT-----VFTVFADCRKRVDPPMPDSYF 306
P ++F ++W + + + E+ F ADCR + +PP+P SYF
Sbjct: 262 PK--LTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGXEFFGCAADCRAQFNPPLPPSYF 319
Query: 307 GNLIQAIFTVTAAGLLTGNPP-EFGASMIQKAIEAHTAKAIDERNEGWENAPKIFQFKDA 365
GN + T L G +I +AI ++E W + F+ D
Sbjct: 320 GNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRX------KDEEWILSGSWFKEYDK 373
Query: 366 --GVNCVAVGSSPRFKVYEVDFGWGKPESVRSGSNNRFDGM 404
++V SP+ +Y DFGWG+PE + S + DG+
Sbjct: 374 VDAKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGI 414
>pdb|2ZBA|A Chain A, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|B Chain B, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|C Chain C, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
pdb|2ZBA|D Chain D, Crystal Sructure Of F. Sporotrichioides Tri101 Complexed
With Coenzyme A And T-2
Length = 459
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 120/323 (37%), Gaps = 38/323 (11%)
Query: 139 RPLLALQLTKLKDGMAIGCAFNHAILDGTSTWHFMSSWAQACNGATSV------------ 186
+P+L LQL +K G+ + H D T + ++AC +
Sbjct: 143 KPVLLLQLNFIKGGLILTVNGQHGAXDXTGQDAIIRLLSKACRNESFTEEEISAXNLDRK 202
Query: 187 SVPPFLERTKSRNTRVKLDPSLPPDPHSQSSGDAAAKQEPVLREKVFKFSEAAIDKIKSK 246
+V P LE K+ P L + A F F+ A+ ++K
Sbjct: 203 TVVPLLEN-------YKVGPELDHQIAKPAPAGDAPPAPAKATWAFFSFTPKALSELKDA 255
Query: 247 VNENGPSDGSKPF-STFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRVDPPMP--- 302
+ D S F ST +L+ IW+ + R L D + T F CR VD P
Sbjct: 256 ATKT--LDASSKFVSTDDALSAFIWQSTSRVR-LARLDASTPTEF--CRA-VDXRGPXGV 309
Query: 303 -DSYFGNLIQAIFTVTAAGLLTGNPPEFGASMIQKAIEA----HTAKAIDERNEGWENAP 357
+Y G L + + + P AS ++ + + +A+ G +
Sbjct: 310 SSTYPGLLQNXTYHDSTVAEIANEPLGATASRLRSELNSDRLRRRTQALATYXHGLPDKS 369
Query: 358 KIFQFKDAG-VNCVAVGSSPRFKVYEVDFGWG--KPESVRSGSNNRFDGMVYLYQGKSGG 414
+ DA + + + S + +E DFG+G KPESVR F+ + Y K G
Sbjct: 370 SVSLTADANPSSSIXLSSWAKVGCWEYDFGFGLGKPESVRRPRFEPFESLXYFXPKKPDG 429
Query: 415 RSIDVEITLEPGAMERLEKDNEF 437
I+L ERL+ D E+
Sbjct: 430 E-FTASISLRDEDXERLKADEEW 451
>pdb|2RKV|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Coenzyme A And T-2 Mycotoxin
pdb|3B2S|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Coenzyme A And Deoxynivalenol
pdb|3B30|A Chain A, Crystal Sructure Of F. Graminearum Tri101 Complexed With
Ethyl Coenzyme A
Length = 451
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 128/326 (39%), Gaps = 43/326 (13%)
Query: 139 RPLLALQLTKLKDGMAIGCAFNHAILDGTSTWHFMSSWAQACNGATSVSVPPFLER--TK 196
+P++ LQL +K G+ + H +D + ++AC PF E T
Sbjct: 134 KPVILLQLNFIKGGLILTVNGQHGAMDMVGQDAVIRLLSKACRND------PFTEEEMTA 187
Query: 197 SRNTRVKLDPSL------PPDPHSQSSGDAA---AKQEPVLRE-KVFKFSEAAIDKIKSK 246
R + P L P H D A A PV F FS A+ ++K
Sbjct: 188 MNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAMSELKDA 247
Query: 247 VNENGPSDGSKPF-STFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRVD--PPM-- 301
+ D S F ST +L+ IW+ + R L+ D + T F CR VD P M
Sbjct: 248 ATKT--LDASTKFVSTDDALSAFIWKSASRVR-LERIDGSAPTEF--CRA-VDARPAMGV 301
Query: 302 PDSYFGNLIQAIFTVTAAGLLTGNPPEFGASMIQKAIEAHTAKAIDERNEG----WENAP 357
++Y G L + + G + AS ++ ++ + + +R G N P
Sbjct: 302 SNNYPGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMR---QRTRGLATYLHNNP 358
Query: 358 ---KIFQFKDAG-VNCVAVGSSPRFKVYEVDF--GWGKPESVRSGSNNRFDGMVYLYQGK 411
+ DA V + S + +++ DF G GKPE+VR + ++Y K
Sbjct: 359 DKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKK 418
Query: 412 SGGRSIDVEITLEPGAMERLEKDNEF 437
G ++L M+RL+ D E+
Sbjct: 419 PDGEFC-AALSLRDEDMDRLKADKEW 443
>pdb|2RKT|A Chain A, Crystal Sructure Of Apo F. Graminearum Tri101
Length = 452
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 122/325 (37%), Gaps = 41/325 (12%)
Query: 139 RPLLALQLTKLKDGMAIGCAFNHAILDGTSTWHFMSSWAQACNGATSVSVPPFLER--TK 196
+P++ LQL +K G+ + H D + ++AC PF E T
Sbjct: 135 KPVILLQLNFIKGGLILTVNGQHGAXDXVGQDAVIRLLSKACRND------PFTEEEXTA 188
Query: 197 SRNTRVKLDPSL------PPDPHSQSSGDAA---AKQEPVLRE-KVFKFSEAAIDKIKSK 246
R + P L P H D A A PV F FS A ++K
Sbjct: 189 XNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAXSELKDA 248
Query: 247 VNENGPSDGSKPF-STFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRVDPP---MP 302
+ D S F ST +L+ IW+ + R L+ D + T F CR P +
Sbjct: 249 ATKT--LDASTKFVSTDDALSAFIWKSASRVR-LERIDGSAPTEF--CRAVDARPAXGVS 303
Query: 303 DSYFGNLIQAIFTVTAAGLLTGNPPEFGASMIQKAIEAHTAKAIDERNEG----WENAP- 357
++Y G L + + G + AS ++ ++ + + +R G N P
Sbjct: 304 NNYPGLLQNXTYHNSTIGEIANESLGATASRLRSELDPASXR---QRTRGLATYLHNNPD 360
Query: 358 --KIFQFKDAG-VNCVAVGSSPRFKVYEVDF--GWGKPESVRSGSNNRFDGMVYLYQGKS 412
+ DA V + S + +++ DF G GKPE+VR + + Y K
Sbjct: 361 KSNVSLTADADPSTSVXLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLXYFXPKKP 420
Query: 413 GGRSIDVEITLEPGAMERLEKDNEF 437
G ++L +RL+ D E+
Sbjct: 421 DGEFC-AALSLRDEDXDRLKADKEW 444
>pdb|3FHA|A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHA|B Chain B, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHA|C Chain C, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHA|D Chain D, Structure Of Endo-Beta-N-Acetylglucosaminidase A
Length = 621
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
Query: 136 GTHRPLLALQLTKLKDGM-------AIGCAFNHAILDGTSTWHFMSSWAQACNGATSVSV 188
G +RP A Q ++ + +G N A DG S W M+ W A + ATSV
Sbjct: 297 GLYRPDWAFQSSETMEAFYEKELQFWVGSTGNPAETDGQSNWPGMAHWFPAKSTATSV-- 354
Query: 189 PPFL 192
PF+
Sbjct: 355 -PFV 357
>pdb|3FHQ|A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHQ|B Chain B, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHQ|D Chain D, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHQ|F Chain F, Structure Of Endo-Beta-N-Acetylglucosaminidase A
Length = 621
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
Query: 136 GTHRPLLALQLTKLKDGM-------AIGCAFNHAILDGTSTWHFMSSWAQACNGATSVSV 188
G +RP A Q ++ + +G N A DG S W M+ W A + ATSV
Sbjct: 297 GLYRPDWAFQSSETMEAFYEKELQFWVGSTGNPAETDGQSNWPGMAHWFPAKSTATSV-- 354
Query: 189 PPFL 192
PF+
Sbjct: 355 -PFV 357
>pdb|2VTF|A Chain A, X-Ray Crystal Structure Of The Endo-Beta-N-
Acetylglucosaminidase From Arthrobacter Protophormiae
E173q Mutant Reveals A Tim Barrel Catalytic Domain And
Two Ancillary Domains
pdb|2VTF|B Chain B, X-Ray Crystal Structure Of The Endo-Beta-N-
Acetylglucosaminidase From Arthrobacter Protophormiae
E173q Mutant Reveals A Tim Barrel Catalytic Domain And
Two Ancillary Domains
Length = 626
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
Query: 136 GTHRPLLALQLTKLKDGM-------AIGCAFNHAILDGTSTWHFMSSWAQACNGATSVSV 188
G +RP A Q ++ + +G N A DG S W M+ W A + ATSV
Sbjct: 302 GLYRPDWAFQSSETMEAFYEKELQFWVGSTGNPAETDGQSNWPGMAHWFPAKSTATSV-- 359
Query: 189 PPFL 192
PF+
Sbjct: 360 -PFV 362
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,460,204
Number of Sequences: 62578
Number of extensions: 555114
Number of successful extensions: 1741
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1702
Number of HSP's gapped (non-prelim): 21
length of query: 441
length of database: 14,973,337
effective HSP length: 102
effective length of query: 339
effective length of database: 8,590,381
effective search space: 2912139159
effective search space used: 2912139159
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)