Query 013527
Match_columns 441
No_of_seqs 158 out of 1261
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 12:15:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013527.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013527hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 9.7E-80 3.3E-84 619.4 42.7 419 5-434 6-435 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 3.8E-74 1.3E-78 575.6 35.5 401 5-441 3-415 (421)
3 2e1v_A Acyl transferase; BAHD 100.0 2.9E-74 1E-78 582.4 28.9 417 1-433 1-444 (454)
4 2xr7_A Malonyltransferase; xen 100.0 8.3E-74 2.8E-78 579.2 31.1 414 7-433 2-444 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 2E-66 6.8E-71 525.2 35.4 410 25-441 4-447 (451)
6 1q9j_A PAPA5, polyketide synth 99.1 2.8E-08 9.5E-13 98.3 26.3 286 23-340 5-313 (422)
7 2jgp_A Tyrocidine synthetase 3 98.6 6.8E-06 2.3E-10 83.6 24.0 279 23-340 94-400 (520)
8 1l5a_A Amide synthase, VIBH; n 98.6 4.7E-06 1.6E-10 82.6 20.8 246 58-341 35-305 (436)
9 4hvm_A Tlmii; PSI-biology, mid 98.5 9E-06 3.1E-10 82.1 20.5 280 23-341 11-328 (493)
10 2xhg_A Tyrocidine synthetase A 98.5 1.6E-05 5.3E-10 79.6 21.8 289 23-342 15-337 (466)
11 2vsq_A Surfactin synthetase su 98.3 7.7E-05 2.6E-09 84.3 22.8 289 24-341 11-328 (1304)
12 3fot_A 15-O-acetyltransferase; 98.2 0.00014 4.8E-09 73.5 20.8 246 53-317 70-365 (519)
13 3cla_A Type III chloramphenico 75.1 1.5 5.1E-05 38.4 2.6 44 138-181 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 74.3 1.6 5.5E-05 38.3 2.6 43 138-180 171-216 (217)
15 1q23_A Chloramphenicol acetylt 73.5 1.7 5.9E-05 38.1 2.6 43 139-181 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 70.9 2.3 7.7E-05 37.9 2.8 29 153-181 204-232 (239)
17 1scz_A E2, dihydrolipoamide su 68.7 2.5 8.6E-05 37.5 2.6 30 153-182 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 68.5 2.5 8.7E-05 37.7 2.6 29 153-181 208-236 (243)
19 3rqc_A Probable lipoamide acyl 68.1 2.3 7.8E-05 37.5 2.2 31 152-182 186-216 (224)
20 2ii3_A Lipoamide acyltransfera 67.2 2.8 9.6E-05 37.9 2.6 29 153-181 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 61.0 4.3 0.00015 36.5 2.6 30 153-182 210-239 (256)
22 3l60_A Branched-chain alpha-ke 59.7 4.7 0.00016 36.1 2.6 29 153-181 205-233 (250)
23 4hhu_A OR280; engineered prote 58.7 16 0.00054 28.0 4.9 45 43-93 85-130 (170)
24 4hhu_A OR280; engineered prote 55.6 16 0.00054 28.0 4.5 45 43-93 4-49 (170)
25 2k1o_A Putative; repressor, tr 45.6 62 0.0021 21.2 5.5 41 226-277 13-53 (66)
26 3dva_I Dihydrolipoyllysine-res 43.9 4.8 0.00016 39.2 0.0 29 153-181 391-419 (428)
27 1x93_A Hypothetical protein HP 42.9 62 0.0021 20.4 5.6 23 229-251 2-24 (55)
28 2kl8_A OR15; structural genomi 40.7 81 0.0028 21.2 5.8 36 58-93 12-48 (85)
29 2xl1_A Arginine attenuator pep 36.9 21 0.00071 18.6 1.7 19 257-275 6-24 (26)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=9.7e-80 Score=619.36 Aligned_cols=419 Identities=27% Similarity=0.443 Sum_probs=343.8
Q ss_pred eeEEEEEeEeeeCCCCCCCcceeCCCCCcccccccceeEEEEeeCCCCchhHHHHHHHHHHHHhhhhccCCCcceeeCCC
Q 013527 5 TKVKITSKTHVKPSKVIGRRECQLVTFDLPYLFFYYNQKLLLYRNGDREFHDAVEKLKDGLKHVLEEFYQLAGKLGKDEE 84 (441)
Q Consensus 5 ~~v~v~~~~~V~p~~~~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~ 84 (441)
|+|+|+++++|+|+.|++.+.++||+||+..+ ..|++.+|||+.+..+....+++||+||+++|.+||||||||+.+++
T Consensus 6 ~~V~i~~~~~V~P~~~tp~~~~~LS~lD~~~~-~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~~ 84 (439)
T 4g22_A 6 MKIEVKESTMVRPAQETPGRNLWNSNVDLVVP-NFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFYPMAGRLKRDED 84 (439)
T ss_dssp CCEEEEEEEEECCSSCCCCCEECCCHHHHSCC-TTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTTTTGGGGCEEEECTT
T ss_pred eEEEEeeeEEEeCCCCCCCCeecCChhHhCcc-ccceeeEEEEcCCCCccccHHHHHHHHHHHHHhhccccceeeeeCCC
Confidence 78999999999999999999999999999865 45899999999533222346899999999999999999999998878
Q ss_pred CcEEEEeCCCCCCeEEEEEEcCCcChhcccCCCCccccccccccccccCCCCCCCCeEEEEEeeeCC-eeEEEecccccc
Q 013527 85 GVFRVEYDDDMDGVEVAEAVADEIAVDDLTAEEGTKSFKELIPYYGVLNLEGTHRPLLALQLTKLKD-GMAIGCAFNHAI 163 (441)
Q Consensus 85 g~~~i~~~~~~~gv~f~~a~~~~~~~~~l~~~~~~~~~~~l~P~~~~~~~~~~~~P~l~vqvt~~~~-G~~L~~~~~H~v 163 (441)
|+++|+|+++ ||.|+||+++ .+++|+....+.+.+++|+|.... ..+..+.|++.+|||+|+| |++||+++||.+
T Consensus 85 g~~~i~c~~~--Gv~fv~A~~d-~~l~~l~~~~p~~~~~~l~p~~~~-~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v 160 (439)
T 4g22_A 85 GRIEIECNGE--GVLFVEAESD-GVVDDFGDFAPTLELRRLIPAVDY-SQGISSYALLVLQVTYFKCGGVSLGVGMRHHA 160 (439)
T ss_dssp SCEEEECCCC--CEEEEEEEES-SCGGGGTTCCCCGGGGGGSCCCCT-TSCTTSSCSEEEEEEECTTSCEEEEEEECTTT
T ss_pred CCEEEEECCC--CCEEEEEEcC-CcHHHhcCCCCCHHHHhcCCCCCc-ccccccCceeEEEEEEecCCCEEEEEEeeecc
Confidence 9999999998 9999999998 899999654334456788874322 1122467999999999997 999999999999
Q ss_pred ccccchHHHHHHHHHHhcCCCCCCCCCCcccccccC--Ccc-cCCCCCCCCCCCCCCCCccc--CCC-CCeEEEEEEeCH
Q 013527 164 LDGTSTWHFMSSWAQACNGATSVSVPPFLERTKSRN--TRV-KLDPSLPPDPHSQSSGDAAA--KQE-PVLREKVFKFSE 237 (441)
Q Consensus 164 ~Dg~g~~~fl~~wa~~~rg~~~~~~~p~~~r~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~f~~~~ 237 (441)
+||.|+.+|+++||++|||.. .+.+|++||+.++. +.. ..++.+... .....+.... ..+ .++++++|+|++
T Consensus 161 ~Dg~~~~~Fl~~wa~~~rg~~-~~~~P~~dr~~l~~~~pp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~fs~ 238 (439)
T 4g22_A 161 ADGFSGLHFINSWSDMARGLD-VTLPPFIDRTLLRARDPPQPQFQHIEYQP-PPALAVSPQTAASDSVPETAVSIFKLTR 238 (439)
T ss_dssp CCHHHHHHHHHHHHHHHTTCC-CSSCCBCCGGGGCCCSSCCCSSCCGGGSC-CC---------------CEEEEEEEECH
T ss_pred CcHHHHHHHHHHHHHHhCCCC-CCCCCccccccccCCCCCCCCcCcccccC-CCCCcccccccccCCcccceEEEEEECH
Confidence 999999999999999999976 46789999986642 211 111111000 0000000000 112 578999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhccCCCCCCceEEEEeccCCCcCCCCCCCCCcccceeceeeee
Q 013527 238 AAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRVDPPMPDSYFGNLIQAIFTVT 317 (441)
Q Consensus 238 ~~l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~~~~~~ 317 (441)
++|++||+.+..+. +..++|+||+|+|++|+|++|||.+++++.+.+.++||+|+|++||+|++||||++..+.+.+
T Consensus 239 ~~i~~LK~~a~~~~---~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~ 315 (439)
T 4g22_A 239 EQISALKAKSKEDG---NTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIA 315 (439)
T ss_dssp HHHHHHHHGGGGGG---CCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEE
T ss_pred HHHHHHHHHhhccC---CCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcce
Confidence 99999999998754 235799999999999999999998888889999999999999999999999999999999999
Q ss_pred ecccccCCChHHHHHHHHHHHHHhchHHHHHHHHhhhcCCcccccc----ccCCceeEeecCCCCcccccccCCCcceee
Q 013527 318 AAGLLTGNPPEFGASMIQKAIEAHTAKAIDERNEGWENAPKIFQFK----DAGVNCVAVGSSPRFKVYEVDFGWGKPESV 393 (441)
Q Consensus 318 ~~~~l~~~~l~~~A~~ir~ai~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~ 393 (441)
+++||.+.+|+++|..||+++++++++++++.+++++..++..... ..+...+.++||+++++|++|||||||+++
T Consensus 316 ~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~ 395 (439)
T 4g22_A 316 IAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFM 395 (439)
T ss_dssp EHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEE
T ss_pred EHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCccee
Confidence 9999999999999999999999999999999999987654322111 112235889999999999999999999999
Q ss_pred ecCCCCCCCceEEEeecCCCCceEEEEEEeCHhHHHHHhhC
Q 013527 394 RSGSNNRFDGMVYLYQGKSGGRSIDVEITLEPGAMERLEKD 434 (441)
Q Consensus 394 ~~~~~~~~~g~~~i~p~~~~~~g~ev~v~L~~~~m~~l~~d 434 (441)
++. ....+|.++++|+++++||++|.|+|++++|++|++.
T Consensus 396 ~~~-~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~ 435 (439)
T 4g22_A 396 GPG-GIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSF 435 (439)
T ss_dssp EES-SCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHHH
T ss_pred ecc-ccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHHH
Confidence 987 3456899999999888889999999999999999863
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3.8e-74 Score=575.59 Aligned_cols=401 Identities=22% Similarity=0.344 Sum_probs=327.1
Q ss_pred eeEEEEEeEeeeCCCCCCC--cceeCCCCCcccccccceeEEEEeeCCCC---chhHHHHHHHHHHHHhhhhccCCCcce
Q 013527 5 TKVKITSKTHVKPSKVIGR--RECQLVTFDLPYLFFYYNQKLLLYRNGDR---EFHDAVEKLKDGLKHVLEEFYQLAGKL 79 (441)
Q Consensus 5 ~~v~v~~~~~V~p~~~~~~--~~~~LS~lD~~~~~~~~~~~~~~f~~~~~---~~~~~~~~L~~sL~~~L~~~p~LaGrl 79 (441)
|+|+|+++++|+|+.|++. +.++||+||++.+ ..|++.+|||+.++. +.+..+++||+||+++|++||+|||||
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 81 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLL-TCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRI 81 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSC-SSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhccc-ccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhcccc
Confidence 7899999999999999874 5999999999865 468999999994322 356789999999999999999999999
Q ss_pred eeCCCCcEEEEeCCCCCCeEEEEEEcCCcChhcccCC-CCcccccccccccccc--CCCCCCCCeEEEEEeeeCC-eeEE
Q 013527 80 GKDEEGVFRVEYDDDMDGVEVAEAVADEIAVDDLTAE-EGTKSFKELIPYYGVL--NLEGTHRPLLALQLTKLKD-GMAI 155 (441)
Q Consensus 80 ~~~~~g~~~i~~~~~~~gv~f~~a~~~~~~~~~l~~~-~~~~~~~~l~P~~~~~--~~~~~~~P~l~vqvt~~~~-G~~L 155 (441)
+. +++|+|+++ ||.|+||+++ .+++|+... ...+.++.|+|..... +....+.|++.+|||+|+| |++|
T Consensus 82 ~~----~~~i~c~~~--Gv~fv~A~~d-~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~l 154 (421)
T 2bgh_A 82 NV----NSSVDCNDS--GVPFVEARVQ-AQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAI 154 (421)
T ss_dssp ET----TTEEECCCC--CEEEEEEEES-SCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEE
T ss_pred CC----CcEEEEcCC--ceEEEEEEEc-CCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEE
Confidence 63 589999998 9999999998 899998754 2223467788865211 0113468999999999996 9999
Q ss_pred EeccccccccccchHHHHHHHHHHhcCCCCCCCCCCccc-ccccCCcccCCCCCCCCCCCCCCCCcccCCCCCeEEEEEE
Q 013527 156 GCAFNHAILDGTSTWHFMSSWAQACNGATSVSVPPFLER-TKSRNTRVKLDPSLPPDPHSQSSGDAAAKQEPVLREKVFK 234 (441)
Q Consensus 156 ~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~p~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 234 (441)
|+++||.++||.|+.+|+++||++|||.... .+|++|| ..+..+.+ +.+.+ .....+++.+++|+
T Consensus 155 g~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~-~~P~~dr~~~l~p~~~--~~~~~-----------~~~~~~~~~~~~f~ 220 (421)
T 2bgh_A 155 GVNLSHKIADVLSLATFLNAWTATCRGETEI-VLPNFDLAARHFPPVD--NTPSP-----------ELVPDENVVMKRFV 220 (421)
T ss_dssp EEEEETTTCCHHHHHHHHHHHHHHHTTCSCC-CCCBCSHHHHHSCCCT--TCCCC-----------CCCCCSSEEEEEEE
T ss_pred EEEeeEEechHHHHHHHHHHHHHHhcCCCCC-CCCccccccccCCCcc--cCCCC-----------ccCCccceEEEEEE
Confidence 9999999999999999999999999997643 6788998 54321101 11110 00124578999999
Q ss_pred eCHHHHHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhccCCC--CCCceEEEEeccCCCcCCCCCCCCCcccceec
Q 013527 235 FSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLK--PEDYTVFTVFADCRKRVDPPMPDSYFGNLIQA 312 (441)
Q Consensus 235 ~~~~~l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~--~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~ 312 (441)
|++++|++||+.+.++. ...++|+||+|+|++|+|+++||... +++.+.+.++||+|+|++||+|++||||++..
T Consensus 221 f~~~~i~~LK~~a~~~~---~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~ 297 (421)
T 2bgh_A 221 FDKEKIGALRAQASSAS---EEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATL 297 (421)
T ss_dssp ECHHHHHHHHHHTC--------CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEE
T ss_pred ECHHHHHHHHHHhhccC---CCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEE
Confidence 99999999999997653 22579999999999999999998642 46789999999999999999999999999999
Q ss_pred eeeeeecccccCCChHHHHHHHHHHHHHhchHHHHHHHHhhhcCCccccccccCCceeEeecCCCCcccccccCCCccee
Q 013527 313 IFTVTAAGLLTGNPPEFGASMIQKAIEAHTAKAIDERNEGWENAPKIFQFKDAGVNCVAVGSSPRFKVYEVDFGWGKPES 392 (441)
Q Consensus 313 ~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~G~P~~ 392 (441)
+.+.+++++ +.+|+++|..||++++++++++++...++.+.... . .+.+.+.+|||+++++|++|||||+|++
T Consensus 298 ~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~vssw~~~~~y~~DFGwGkP~~ 370 (421)
T 2bgh_A 298 LFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYE---L--EPQELLSFTSWCRLGFYDLDFGWGKPLS 370 (421)
T ss_dssp EEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHT---S--CGGGEEEEEEETTSCGGGCCSSSCCCSE
T ss_pred EEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---c--CCCCeEEEeccccCCCcccccCCCccCe
Confidence 999888876 67899999999999999999899877766532111 0 1123588999999999999999999999
Q ss_pred eecCCCCCCCceEEEeecCCCCceEEEEEEeCHhHHHHHhhChhhhhcC
Q 013527 393 VRSGSNNRFDGMVYLYQGKSGGRSIDVEITLEPGAMERLEKDNEFLMEL 441 (441)
Q Consensus 393 ~~~~~~~~~~g~~~i~p~~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~ 441 (441)
+++.. ...+|.++++|+++++ |++|.|+|++++|++|++ ||.+|+
T Consensus 371 v~~~~-~~~~g~~~~~p~~~~~-gi~v~v~L~~~~m~~f~~--e~~~~~ 415 (421)
T 2bgh_A 371 ACTTT-FPKRNAALLMDTRSGD-GVEAWLPMAEDEMAMLPV--ELLSLV 415 (421)
T ss_dssp EECCC-CCSTTEEEEEECTTSS-SEEEEEEEEHHHHHHSCH--HHHTTB
T ss_pred ecccc-cCcCCEEEEEecCCCC-eEEEEEEcCHHHHHHHHH--HHHHhh
Confidence 99873 4468999999998765 799999999999999988 998884
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.9e-74 Score=582.42 Aligned_cols=417 Identities=22% Similarity=0.377 Sum_probs=324.3
Q ss_pred CCcceeEEEEEeEeeeCCCC-CCCcceeCCCCCcccccccceeEEEEeeCCCC-c--hhHHHHHHHHHHHHhhhhccCCC
Q 013527 1 MAEITKVKITSKTHVKPSKV-IGRRECQLVTFDLPYLFFYYNQKLLLYRNGDR-E--FHDAVEKLKDGLKHVLEEFYQLA 76 (441)
Q Consensus 1 ~~~~~~v~v~~~~~V~p~~~-~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~-~--~~~~~~~L~~sL~~~L~~~p~La 76 (441)
|++..+|+|+++++|+|+.| ++.+.++||+||+.+...+|++.+|||+.+.. + .+.++++||+||+++|++||+||
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plA 80 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFV 80 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGG
T ss_pred CCCCceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccc
Confidence 77888999999999999987 56789999999998655568999999995432 2 44578999999999999999999
Q ss_pred ccee-eC-CCCcEEEEeCC-CCCCeEEEEEEcCCcChhcccCCCC--ccccccccccccccC--CCCCCCCeEEEEEeee
Q 013527 77 GKLG-KD-EEGVFRVEYDD-DMDGVEVAEAVADEIAVDDLTAEEG--TKSFKELIPYYGVLN--LEGTHRPLLALQLTKL 149 (441)
Q Consensus 77 Grl~-~~-~~g~~~i~~~~-~~~gv~f~~a~~~~~~~~~l~~~~~--~~~~~~l~P~~~~~~--~~~~~~P~l~vqvt~~ 149 (441)
|||+ .+ ++|+++|+|++ + ||.|+||+++ .+++++....+ .+.++.|+|...... .+..+.|++.+|||+|
T Consensus 81 GRl~~~~~~~g~~~i~c~~~~--gv~fv~A~~~-~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f 157 (454)
T 2e1v_A 81 GKLVVYPAPTKKPEICYVEGD--SVAVTFAECN-LDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLF 157 (454)
T ss_dssp SEEEECSSSSSCCEEEECTTC--CEEEEEEEEC-SCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEE
T ss_pred eeeeeccCCCCCEEEEECCCC--cEEEEEEEeC-CCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEe
Confidence 9998 54 68999999995 6 9999999998 89999975432 234677887532111 1113459999999999
Q ss_pred CC-eeEEEeccccccccccchHHHHHHHHHHhc-CCC-----CCCCCCCcccccccCCcccCCCC-CCCCCCCCC--CCC
Q 013527 150 KD-GMAIGCAFNHAILDGTSTWHFMSSWAQACN-GAT-----SVSVPPFLERTKSRNTRVKLDPS-LPPDPHSQS--SGD 219 (441)
Q Consensus 150 ~~-G~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~-----~~~~~p~~~r~~~~~~~~~~~~~-~~~~~~~~~--~~~ 219 (441)
+| |++||+++||.++||.|+.+|+++||++|| |.. .+..+|++|| .+++|....... .... .... ...
T Consensus 158 ~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~~~~~~~~~~~~-~~~~~~~~~ 235 (454)
T 2e1v_A 158 PNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPMLDEAYLKRAKV-ESFNEDYVT 235 (454)
T ss_dssp TTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHHHHHHHHHHTTC-TTHHHHCCC
T ss_pred cCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCCcchHHHHhhhc-cccccccCc
Confidence 97 999999999999999999999999999999 763 1246789999 776432000000 0000 0000 000
Q ss_pred cccCCCCCeEEEEEEeCHHHHHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhccCCCCCCceEEEEeccCCCcCCC
Q 013527 220 AAAKQEPVLREKVFKFSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRVDP 299 (441)
Q Consensus 220 ~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p 299 (441)
.....+.+.++++|+|++++|++||+++.++.. ...++|+||+|+|++|+|+++|| +++.+.+.++||+|+|++|
T Consensus 236 ~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~--~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~~vd~R~rl~p 310 (454)
T 2e1v_A 236 QSLAGPSDKLRATFILTRAVINQLKDRVLAQLP--TLEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFPIDRRARMKP 310 (454)
T ss_dssp CCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCT--TCSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEEECGGGSSS
T ss_pred ccCCCCCCceEEEEEECHHHHHHHHHHHhhcCC--CCCcccHHHHHHHHHHHHHhhhc---CCCceEEEEEecchhccCC
Confidence 000023567899999999999999999987542 12579999999999999999999 5788999999999999999
Q ss_pred CCCCCCcccceeceeeeeecccccC-CChHHHHHHHHHHHHHhchHHHHH-----HHHhhhcCCccccccccCCceeEee
Q 013527 300 PMPDSYFGNLIQAIFTVTAAGLLTG-NPPEFGASMIQKAIEAHTAKAIDE-----RNEGWENAPKIFQFKDAGVNCVAVG 373 (441)
Q Consensus 300 ~lp~~y~GN~~~~~~~~~~~~~l~~-~~l~~~A~~ir~ai~~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~s 373 (441)
|+|++||||++..+.+.++++||.+ .+|+++|..||+++++++++|+++ ..+|++..+. . .+...+.++
T Consensus 311 plP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~vs 385 (454)
T 2e1v_A 311 PIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSE---G--MPTTMTWVS 385 (454)
T ss_dssp CCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHH---C--CCSEEEEEE
T ss_pred CCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHh---h--cCCceEEEe
Confidence 9999999999999999999999995 789999999999999997555443 3333332111 1 122358899
Q ss_pred cCCCCcccccccCCCcceeeecCCCCCCCceEEEeecCCCCceEEEEEEeCHhHHHHHhh
Q 013527 374 SSPRFKVYEVDFGWGKPESVRSGSNNRFDGMVYLYQGKSGGRSIDVEITLEPGAMERLEK 433 (441)
Q Consensus 374 sw~~~~~~~~DFG~G~P~~~~~~~~~~~~g~~~i~p~~~~~~g~ev~v~L~~~~m~~l~~ 433 (441)
||+++++|++|||||+|+++++.. ...+|.++|+|+++++||++|.|+|++++|++|++
T Consensus 386 sw~~~~~y~~DFG~G~P~~v~~~~-~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~ 444 (454)
T 2e1v_A 386 GTPKLRFYDMDFGWGKPKKLETVS-IDHNGAISINSCKESNEDLEIGVCISATQMEDFVH 444 (454)
T ss_dssp CCTTSCGGGCCSSSCSCSEEEEGG-GGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH
T ss_pred cCCCCCcccccccCccceEEEeee-eCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH
Confidence 999999999999999999999863 33579999999988888999999999999999964
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=8.3e-74 Score=579.17 Aligned_cols=414 Identities=22% Similarity=0.361 Sum_probs=330.4
Q ss_pred EEEEEeEeeeCCCC-CCCcceeCCCCCcccccccceeEEEEeeCCCC-c--hhHHHHHHHHHHHHhhhhccCCCcceeeC
Q 013527 7 VKITSKTHVKPSKV-IGRRECQLVTFDLPYLFFYYNQKLLLYRNGDR-E--FHDAVEKLKDGLKHVLEEFYQLAGKLGKD 82 (441)
Q Consensus 7 v~v~~~~~V~p~~~-~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~-~--~~~~~~~L~~sL~~~L~~~p~LaGrl~~~ 82 (441)
|+|+++++|+|+.| ++.+.++||+||+.+...+|++.+|||+.+.. + .+.++++||+||+++|++||+|||||+.+
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~ 81 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACP 81 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEE
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEcc
Confidence 89999999999987 56789999999998655568999999995322 2 45678999999999999999999999976
Q ss_pred C--CCcEEEEeCC-CCCCeEEEEEEcCCcChhcccCCC--CccccccccccccccCC--CCCCCCeEEEEEeeeCC-eeE
Q 013527 83 E--EGVFRVEYDD-DMDGVEVAEAVADEIAVDDLTAEE--GTKSFKELIPYYGVLNL--EGTHRPLLALQLTKLKD-GMA 154 (441)
Q Consensus 83 ~--~g~~~i~~~~-~~~gv~f~~a~~~~~~~~~l~~~~--~~~~~~~l~P~~~~~~~--~~~~~P~l~vqvt~~~~-G~~ 154 (441)
+ +|+++|+|++ + ||.|+||+++ .+++++.... +.+.++.|+|....... ...+.|++.+|||+|+| |++
T Consensus 82 ~~~~g~~~i~c~~~~--gv~fv~A~~~-~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~ 158 (453)
T 2xr7_A 82 QDWSGYPELRYVTGN--SVSVIFSESD-MDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGIS 158 (453)
T ss_dssp SSTTCCCEEEEETTC--CCEEEEEECC-SCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEE
T ss_pred CCCCCCEEEEecCCC--ceEEEEEecC-CCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEE
Confidence 5 8999999995 7 9999999998 8999997543 23346778875321110 01127999999999997 999
Q ss_pred EEeccccccccccchHHHHHHHHHHhc-CC-C---CCCCCCCcccccccCCcccC-CCCCCCCCCCCCCCCcccCCCCCe
Q 013527 155 IGCAFNHAILDGTSTWHFMSSWAQACN-GA-T---SVSVPPFLERTKSRNTRVKL-DPSLPPDPHSQSSGDAAAKQEPVL 228 (441)
Q Consensus 155 L~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~-~---~~~~~p~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 228 (441)
||+++||.++||.|+.+|+++||++|| |. . .+..+|++||+.++.+.... ....................+.+.
T Consensus 159 lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (453)
T 2xr7_A 159 IGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDK 238 (453)
T ss_dssp EEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSC
T ss_pred EEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCCCcchHHHHhccccCCccccccccCCCCc
Confidence 999999999999999999999999999 76 2 12456899998766443100 000000000000000000123467
Q ss_pred EEEEEEeCHHHHHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhccCC-----CCCCceEEEEeccCCCcCCCCCCC
Q 013527 229 REKVFKFSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSL-----KPEDYTVFTVFADCRKRVDPPMPD 303 (441)
Q Consensus 229 ~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~-----~~~~~~~l~~~vd~R~rl~p~lp~ 303 (441)
++++|+|++++|++||+.+.++.. ...++|+||+|+|++|+|+++||.. ++++.+.+.++||+|+|++||+|+
T Consensus 239 ~~~~f~f~~~~i~~Lk~~a~~~~~--~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~ 316 (453)
T 2xr7_A 239 VRGTFIITRHDIGKLKNLVLTRRP--KLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPP 316 (453)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHSC--CCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCT
T ss_pred eEEEEEECHHHHHHHHHHHhhcCC--CCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCc
Confidence 789999999999999999987542 1257999999999999999999975 567889999999999999999999
Q ss_pred CCcccceeceeeeeecccccC-CChHHHHHHHHHHHHH--hchH-HHHHHHHhhhcCCccccccccCCceeEeecCCCCc
Q 013527 304 SYFGNLIQAIFTVTAAGLLTG-NPPEFGASMIQKAIEA--HTAK-AIDERNEGWENAPKIFQFKDAGVNCVAVGSSPRFK 379 (441)
Q Consensus 304 ~y~GN~~~~~~~~~~~~~l~~-~~l~~~A~~ir~ai~~--~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~ 379 (441)
+||||++..+.+.++++||.+ .+|+++|..||+++++ ++++ ++++ ++++..+.+. +...+.++||++++
T Consensus 317 ~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~~~-----~~~~~~vssw~~~~ 389 (453)
T 2xr7_A 317 SYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDKVD-----AKRSLSVAGSPKLD 389 (453)
T ss_dssp TBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCCSC-----GGGEEEECSCSSCC
T ss_pred ccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHhhc-----cCCcEEEeccccCC
Confidence 999999999999999999995 7899999999999999 5788 8888 7776544321 12358899999999
Q ss_pred ccccccCCCcceeeecCCCCCCCc--eEEEeecCCCCceEEEEEEeCHhHHHHHhh
Q 013527 380 VYEVDFGWGKPESVRSGSNNRFDG--MVYLYQGKSGGRSIDVEITLEPGAMERLEK 433 (441)
Q Consensus 380 ~~~~DFG~G~P~~~~~~~~~~~~g--~~~i~p~~~~~~g~ev~v~L~~~~m~~l~~ 433 (441)
+|++|||||+|+++++.. ...+| .++|+|+++++||++|.|+|++++|++|++
T Consensus 390 ~y~~DFG~G~P~~v~~~~-~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~ 444 (453)
T 2xr7_A 390 LYAADFGWGRPEKLEFVS-IDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA 444 (453)
T ss_dssp GGGCCCSSCSCSEEEEGG-GSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH
T ss_pred ccccccCCCcceEEEeee-ecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH
Confidence 999999999999999863 34578 888999888888999999999999999964
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=2e-66 Score=525.25 Aligned_cols=410 Identities=19% Similarity=0.237 Sum_probs=310.8
Q ss_pred ceeCCCCCcccc-cccceeEEEEeeCCCC-chhHHHHHHHHHHHHhhhhccCCCcceeeCC-----CCcEEEEeCCCCCC
Q 013527 25 ECQLVTFDLPYL-FFYYNQKLLLYRNGDR-EFHDAVEKLKDGLKHVLEEFYQLAGKLGKDE-----EGVFRVEYDDDMDG 97 (441)
Q Consensus 25 ~~~LS~lD~~~~-~~~~~~~~~~f~~~~~-~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~-----~g~~~i~~~~~~~g 97 (441)
.++||.|||+.+ ...|++.+|||+.++. +.++++++||+||+++|++||||||||+.+. +|+++|+|+++ +
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~--~ 81 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFED--V 81 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCS--S
T ss_pred cccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCC--C
Confidence 469999999872 2458999999994322 4567899999999999999999999998643 68999998776 7
Q ss_pred eEEEEEEcCC----cChhcccCCC-Cccccc--ccccccccc----CCCCCCCCeEEEEEeeeCCeeEEEeccccccccc
Q 013527 98 VEVAEAVADE----IAVDDLTAEE-GTKSFK--ELIPYYGVL----NLEGTHRPLLALQLTKLKDGMAIGCAFNHAILDG 166 (441)
Q Consensus 98 v~f~~a~~~~----~~~~~l~~~~-~~~~~~--~l~P~~~~~----~~~~~~~P~l~vqvt~~~~G~~L~~~~~H~v~Dg 166 (441)
+.|++++++. .+++++.... +.+.++ .|.|..... +....+.|++.+|||++.||++||+++||.++||
T Consensus 82 ~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~~GG~~lg~~~~H~v~Dg 161 (451)
T 2rkv_A 82 PRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFIKGGLILTVNGQHGAMDM 161 (451)
T ss_dssp CEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEEBTEEEEEEEEETTTCCH
T ss_pred CeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEecCceeeeeeehhccccH
Confidence 7788888761 2677776322 222222 233422110 1122358999999998878999999999999999
Q ss_pred cchHHHHHHHHHHhcCCCCCC---CCCCcccccccCC-cccCCCCCCCCCCCC--CCCC-cccCCCCCeEEEEEEeCHHH
Q 013527 167 TSTWHFMSSWAQACNGATSVS---VPPFLERTKSRNT-RVKLDPSLPPDPHSQ--SSGD-AAAKQEPVLREKVFKFSEAA 239 (441)
Q Consensus 167 ~g~~~fl~~wa~~~rg~~~~~---~~p~~~r~~~~~~-~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~f~~~~~~ 239 (441)
.|+.+|+++||++|||...+. .+|++||+.+... .+..+.+.... .+. .... ......+++.+++|+|++++
T Consensus 162 ~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~ 240 (451)
T 2rkv_A 162 VGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDH-QIVKADVAGGDAVLTPVSASWAFFTFSPKA 240 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTT-CBCCTTSCC-------CCEEEEEEEECHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccc-cccCCCCCCCCCCCCCCCceEEEEEECHHH
Confidence 999999999999999975221 2578888632211 00000000000 000 0000 00112456889999999999
Q ss_pred HHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhcc-C-CCCCCceEEEEeccCCCcCCCCCCCCCcccceeceeeee
Q 013527 240 IDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHAR-S-LKPEDYTVFTVFADCRKRVDPPMPDSYFGNLIQAIFTVT 317 (441)
Q Consensus 240 l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar-~-~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~~~~~~ 317 (441)
|++||+.+.+++.. ...++|+||+|+|++|+|+++|| . .++++.+.+.++||+|+|++ +|.+||||++..+.+.+
T Consensus 241 i~~LK~~a~~~~~~-~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~ 317 (451)
T 2rkv_A 241 MSELKDAATKTLDA-STKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYHNS 317 (451)
T ss_dssp HHHHHHHHHTTCCT-TCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEEEE
T ss_pred HHHHHHHHhhhccC-CCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccceeeecccC
Confidence 99999999876521 13579999999999999999998 3 56778899999999999997 89999999999999999
Q ss_pred ecccccCCChHHHHHHHHHHHHHhchHH-HHHHHHhhhcCCccccc--c--ccCCceeEeecCCCCcccccccC--CCcc
Q 013527 318 AAGLLTGNPPEFGASMIQKAIEAHTAKA-IDERNEGWENAPKIFQF--K--DAGVNCVAVGSSPRFKVYEVDFG--WGKP 390 (441)
Q Consensus 318 ~~~~l~~~~l~~~A~~ir~ai~~~~~~~-i~~~~~~~~~~~~~~~~--~--~~~~~~~~~ssw~~~~~~~~DFG--~G~P 390 (441)
++++|.+.+|+++|..||+++.+++.++ +++.+++++..++...+ . ......+.+|||+++++|++||| ||+|
T Consensus 318 ~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~gwG~P 397 (451)
T 2rkv_A 318 TIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLGLGKP 397 (451)
T ss_dssp EHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTTCSSCSC
T ss_pred cHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCccccccCCCCCCc
Confidence 9999999999999999999999999888 99999999764432111 0 01112488999999999999998 8999
Q ss_pred eeeecCCCCCCCceEEEeecCCCCceEEEEEEeCHhHHHHHhhChhhhhcC
Q 013527 391 ESVRSGSNNRFDGMVYLYQGKSGGRSIDVEITLEPGAMERLEKDNEFLMEL 441 (441)
Q Consensus 391 ~~~~~~~~~~~~g~~~i~p~~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~ 441 (441)
++++.+.....+|.++|+|.. ++||++|.|+|++++|++|++|+||++|+
T Consensus 398 ~~v~~~~~~~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~d~ef~~~~ 447 (451)
T 2rkv_A 398 ETVRRPIFEPVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKADKEWTKYA 447 (451)
T ss_dssp SEEECCBCSCCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHHCHHHHTTC
T ss_pred eEEEcCCccCCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhcCHHHHhhh
Confidence 999876444568999999864 45799999999999999999999999985
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.11 E-value=2.8e-08 Score=98.35 Aligned_cols=286 Identities=17% Similarity=0.137 Sum_probs=163.4
Q ss_pred CcceeCCCCCcccc-cccceeEEEEeeCCCCchhHHHHHHHHHHHHhhhhccCCCcceeeCCCCcEEEEeCCCCCC-eEE
Q 013527 23 RRECQLVTFDLPYL-FFYYNQKLLLYRNGDREFHDAVEKLKDGLKHVLEEFYQLAGKLGKDEEGVFRVEYDDDMDG-VEV 100 (441)
Q Consensus 23 ~~~~~LS~lD~~~~-~~~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~~~g-v~f 100 (441)
...+|||++++.+. ..|++...+-++.+ .| .++|++++.+++..+|.|-.++....++.+++........ +..
T Consensus 5 ~~~~pls~~Q~~~~~~~y~~~~~~~l~g~-ld----~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~ 79 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEVFTSMTIQLRGV-ID----VDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICV 79 (422)
T ss_dssp SEEEECCHHHHHHHHTTCEEEEEEEEESC-CC----HHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEE
T ss_pred ceeecCCHHHHHHHhcCceEEEEEEEecC-CC----HHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCceEE
Confidence 45789999887443 22344444444432 23 6899999999999999999999876555555544433111 232
Q ss_pred EEEEcCCcChhcccCCCCccccccccccccccCCCCCCCCeEEEEEeeeCC-eeEEEeccccccccccchHHHHHHHHHH
Q 013527 101 AEAVADEIAVDDLTAEEGTKSFKELIPYYGVLNLEGTHRPLLALQLTKLKD-GMAIGCAFNHAILDGTSTWHFMSSWAQA 179 (441)
Q Consensus 101 ~~a~~~~~~~~~l~~~~~~~~~~~l~P~~~~~~~~~~~~P~l~vqvt~~~~-G~~L~~~~~H~v~Dg~g~~~fl~~wa~~ 179 (441)
+... +.... ....+.-.| .+ ...|++.+.+.. .+ +..|.+.+||.++||.|+..|++.|.+.
T Consensus 80 ~d~~-------~~~~~--~~~~~~~~~------~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~ 142 (422)
T 1q9j_A 80 IDGT-------AATNG--SPSGNAELR------LD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSR 142 (422)
T ss_dssp EC---------------------CCCC------CC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHH
T ss_pred EECC-------CCCcc--hhhhcccCc------cC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHH
Confidence 2111 11000 000011011 22 357899888887 65 8999999999999999999999999998
Q ss_pred hcC----CCCCCCCC--Ccccc-c-c--cC------Cc--c-cCCCCCCCCCCC-CCCCCcccCCCCCeEEEEEEeCHHH
Q 013527 180 CNG----ATSVSVPP--FLERT-K-S--RN------TR--V-KLDPSLPPDPHS-QSSGDAAAKQEPVLREKVFKFSEAA 239 (441)
Q Consensus 180 ~rg----~~~~~~~p--~~~r~-~-~--~~------~~--~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~f~~~~~~ 239 (441)
+++ ......++ +.+-. . . +. .. + ........-... ......+...........+.++.+.
T Consensus 143 Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~ 222 (422)
T 1q9j_A 143 YTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQ 222 (422)
T ss_dssp HHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHH
T ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHH
Confidence 862 22222222 11110 0 0 00 00 0 000000000000 0000000111223467889999999
Q ss_pred HHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhccCCCCCCceEEEEeccCCCcCCCCCCCCCcccceeceeeeeec
Q 013527 240 IDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRVDPPMPDSYFGNLIQAIFTVTAA 319 (441)
Q Consensus 240 l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~~~~~~~~ 319 (441)
.++|++.|+.. .+|.++++.|.+...+.|-+. .......+.+++++|....|+++..=+.|.+.+....++.
T Consensus 223 ~~~l~~~a~~~-------~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~ 294 (422)
T 1q9j_A 223 TSDLMAFGREH-------RLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEI 294 (422)
T ss_dssp HHHHHHHHTTT-------TCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECC
T ss_pred HHHHHHHHHHh-------CCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccccCCCCChhhhhhhheeeeeeeec
Confidence 99999999754 489999999987766665421 2345788999999999876554422334444444444433
Q ss_pred ccccCCChHHHHHHHHHHHHH
Q 013527 320 GLLTGNPPEFGASMIQKAIEA 340 (441)
Q Consensus 320 ~~l~~~~l~~~A~~ir~ai~~ 340 (441)
.. +.++.+++..+++.+.+
T Consensus 295 ~~--~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 295 GP--NTDIVDLASDIVATLRA 313 (422)
T ss_dssp CS--SCCHHHHHHHHHHHHHH
T ss_pred cC--CCCHHHHHHHHHHHHHH
Confidence 21 34677777777777765
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.62 E-value=6.8e-06 Score=83.60 Aligned_cols=279 Identities=10% Similarity=0.089 Sum_probs=162.2
Q ss_pred CcceeCCCCCccc-------c--cccceeEEEEeeCCCCchhHHHHHHHHHHHHhhhhccCCCcceeeCCCCcE-EEEeC
Q 013527 23 RRECQLVTFDLPY-------L--FFYYNQKLLLYRNGDREFHDAVEKLKDGLKHVLEEFYQLAGKLGKDEEGVF-RVEYD 92 (441)
Q Consensus 23 ~~~~~LS~lD~~~-------~--~~~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~-~i~~~ 92 (441)
...+|||+.-+.+ + ..|.+...+-++.+ .| .++|++++.+++..+|.|--++.... |.+ ++...
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~-ld----~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~~ 167 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGK-LE----RTRVEAAFQRLIARHESLRTSFAVVN-GEPVQNIHE 167 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEEC-CC----HHHHHHHHHHHHHHCGGGGEEEEEET-TEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCC-CC----HHHHHHHHHHHHHHhHhheeEEEeeC-CEEEEEECC
Confidence 4678999876521 1 12344445555532 22 68999999999999999998887643 443 33222
Q ss_pred CCCCCeEEEEEEcCCcChhcccCCCCccccccc-cccccccCCCCCCCCeEEEEEeeeCC-eeEEEeccccccccccchH
Q 013527 93 DDMDGVEVAEAVADEIAVDDLTAEEGTKSFKEL-IPYYGVLNLEGTHRPLLALQLTKLKD-GMAIGCAFNHAILDGTSTW 170 (441)
Q Consensus 93 ~~~~gv~f~~a~~~~~~~~~l~~~~~~~~~~~l-~P~~~~~~~~~~~~P~l~vqvt~~~~-G~~L~~~~~H~v~Dg~g~~ 170 (441)
.....+.+.. . +-+++.. ..+.+ -|+ +....|++++.+....+ ...|.+.+||.++||.|+.
T Consensus 168 ~~~~~~~~~~--~---~~~~~~~-----~~~~~~~~f------dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~ 231 (520)
T 2jgp_A 168 DVPFALAYSE--V---TEEEARE-----LVSSLVQPF------DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSG 231 (520)
T ss_dssp CCCCCCEEEE--C---CHHHHHH-----HHHHTCCCC------CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHH
T ss_pred CCCCceEEEe--C---CHHHHHH-----HHHHhcCCC------CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHH
Confidence 2211222221 1 1111110 00111 121 12346888888877766 7899999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCC-CCcc-----cccccCCc---------ccC-CCCCCCCCCCCCCCCcccCCCCCeEEEEEE
Q 013527 171 HFMSSWAQACNGATSVSVP-PFLE-----RTKSRNTR---------VKL-DPSLPPDPHSQSSGDAAAKQEPVLREKVFK 234 (441)
Q Consensus 171 ~fl~~wa~~~rg~~~~~~~-p~~~-----r~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 234 (441)
.|++.+.+.+++...+..+ ++.+ +....... ..+ ..+.....+. ....+...........+.
T Consensus 232 ~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~--~~~~~~~~~~~~~~~~~~ 309 (520)
T 2jgp_A 232 ILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPT--DFTRPSTQSFAGDQCTIG 309 (520)
T ss_dssp HHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCC--SSCCCSSCCCBEEEEEEE
T ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCC--CCCCCCCCCCCccEEEEe
Confidence 9999999999886422111 1111 00011100 001 1111000000 000011122345678899
Q ss_pred eCHHHHHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhccCCCCCCceEEEEeccCCCcCCCCCCCCCcccceecee
Q 013527 235 FSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRVDPPMPDSYFGNLIQAIF 314 (441)
Q Consensus 235 ~~~~~l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~~~ 314 (441)
++.+..++|++.|... .+|.+.++.|.+-..+.+-.+ .....+.+++++|..- --++-+|+++....
T Consensus 310 l~~~~~~~l~~~a~~~-------~~T~~~~l~aa~a~~L~~~~~---~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lp 376 (520)
T 2jgp_A 310 AGKALTEGLHQLAQAT-------GTTLYMVLLAAYNVLLAKYAG---QEDIIVGTPITGRSHA---DLEPIVGMFVNTLA 376 (520)
T ss_dssp CCHHHHHHHHHHHHHH-------TCCHHHHHHHHHHHHHHHHHT---CSCEEEEEEECCCCSG---GGTTCCSCCCEEEE
T ss_pred CCHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHhcC---CCCeEEEeccCCCCch---hhhccEEeeeeeee
Confidence 9999999999999765 489999999986666555432 3568899999999752 23456677665554
Q ss_pred eeeecccccCCChHHHHHHHHHHHHH
Q 013527 315 TVTAAGLLTGNPPEFGASMIQKAIEA 340 (441)
Q Consensus 315 ~~~~~~~l~~~~l~~~A~~ir~ai~~ 340 (441)
..+.... +.++.+++..+++.+.+
T Consensus 377 lr~~~~~--~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 377 MRNKPQR--EKTFSEFLQEVKQNALD 400 (520)
T ss_dssp EEECCCT--TSBHHHHHHHHHHHHHH
T ss_pred EEecCCC--CCCHHHHHHHHHHHHHH
Confidence 4443321 34577888888777655
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.57 E-value=4.7e-06 Score=82.61 Aligned_cols=246 Identities=12% Similarity=0.016 Sum_probs=144.3
Q ss_pred HHHHHHHHHHhhhhccCCCcceeeCCCCcEEEEeCCCCCCeEEEEEEcCCcCh-hcccCCCCccccccc--cccccccCC
Q 013527 58 VEKLKDGLKHVLEEFYQLAGKLGKDEEGVFRVEYDDDMDGVEVAEAVADEIAV-DDLTAEEGTKSFKEL--IPYYGVLNL 134 (441)
Q Consensus 58 ~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~~~gv~f~~a~~~~~~~-~~l~~~~~~~~~~~l--~P~~~~~~~ 134 (441)
.++|++++.+++..+|.|--++... +| .+..... ..+.++..... ..- .++. ..+... -|+
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~-~~--~v~~~~~-~~~~~~d~~~~-~~~~~~~~-----~~~~~~~~~~f------ 98 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQ-GE--LYWHPFS-PPIDYQDLSIH-LEAEPLAW-----RQIEQDLQRSS------ 98 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTT-CC--EEECSSC-CCCEEEECTTC-TTHHHHHH-----HHHHHHHTSCC------
T ss_pred HHHHHHHHHHHHHHhheeEEEEEec-CC--eECCCcC-CCccEEeCCCC-CCHHHHHH-----HHHHHHhcCCC------
Confidence 6899999999999999998888754 34 3332222 12222211100 000 0000 001111 122
Q ss_pred CCCCCCeEEEEEeeeCC-eeEEEeccccccccccchHHHHHHHHHHhc----CCCCCCCCCCcccc-------cccCCc-
Q 013527 135 EGTHRPLLALQLTKLKD-GMAIGCAFNHAILDGTSTWHFMSSWAQACN----GATSVSVPPFLERT-------KSRNTR- 201 (441)
Q Consensus 135 ~~~~~P~l~vqvt~~~~-G~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r----g~~~~~~~p~~~r~-------~~~~~~- 201 (441)
+....|++++.+....+ ...|.+.+||.++||.|+..|++.+.+.+. |.... .++..-++ ......
T Consensus 99 dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 177 (436)
T 1l5a_A 99 TLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPT-AAFKPYQSYLEEEAAYLTSHRY 177 (436)
T ss_dssp CCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCC-CCCCCHHHHHHHHHHHHTSHHH
T ss_pred CcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCC-CCccCHHHHHHHHHHhhccHhH
Confidence 12346888888877755 889999999999999999999999999887 44422 12111110 111110
Q ss_pred --------ccC-CCCCCCCCCCCCCCCcccCCCCCeEEEEEEeCHHHHHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHH
Q 013527 202 --------VKL-DPSLPPDPHSQSSGDAAAKQEPVLREKVFKFSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRH 272 (441)
Q Consensus 202 --------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~ 272 (441)
..+ ..+.... .... ............+.++.+..++|++.|+.. .+|.+.++.|.+-..
T Consensus 178 ~~~~~~W~~~l~~~~~~~~----lp~~-~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~-------~~t~~~~l~aa~~~~ 245 (436)
T 1l5a_A 178 WQDKQFWQGYLREAPDLTL----TSAT-YDPQLSHAVSLSYTLNSQLNHLLLKLANAN-------QIGWPDALVALCALY 245 (436)
T ss_dssp HHHHHHHHHHHHTSCCCCB----CCTT-CCGGGCCEEEEEEECCHHHHHHHHHHHHHT-------TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCccc----CCCC-CCCCcccceeeEEecCHHHHHHHHHHHHHh-------CCCHHHHHHHHHHHH
Confidence 000 1111100 0000 001123356788999999999999999865 489999999986655
Q ss_pred hhhccCCCCCCceEEEEeccCCCcCCCCCCCCCcccceeceeeeeecccccCCChHHHHHHHHHHHHHh
Q 013527 273 VTHARSLKPEDYTVFTVFADCRKRVDPPMPDSYFGNLIQAIFTVTAAGLLTGNPPEFGASMIQKAIEAH 341 (441)
Q Consensus 273 ~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~ 341 (441)
+.+-. . ....+.+++++|.. +--.+-+|+++......+.... +.++.+++..+++.+.+.
T Consensus 246 L~~~~---g-~dv~ig~~~~~R~~---~~~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 246 LESAE---P-DAPWLWLPFMNRWG---SVAANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp HHHHS---T-TCCEEEEEECCCTT---SGGGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHHH
T ss_pred HHHhh---C-CceEEeeecccCCC---hHHhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHHH
Confidence 55543 3 56789999999965 1234556666654444443221 346788888888777653
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.48 E-value=9e-06 Score=82.10 Aligned_cols=280 Identities=13% Similarity=0.088 Sum_probs=158.2
Q ss_pred CcceeCCCCCccc-------cc-ccceeEEEEeeCCCCchhHHHHHHHHHHHHhhhhccCCCcceeeCCCCcEEEEeCCC
Q 013527 23 RRECQLVTFDLPY-------LF-FYYNQKLLLYRNGDREFHDAVEKLKDGLKHVLEEFYQLAGKLGKDEEGVFRVEYDDD 94 (441)
Q Consensus 23 ~~~~~LS~lD~~~-------~~-~~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~ 94 (441)
...+|||+.-+.+ +. .|.+...+-++.+ .| .++|++++.+++..+|.|--++.... |.+. .....
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~-ld----~~~L~~A~~~lv~rh~~LRt~f~~~~-~~~~-~v~~~ 83 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR-ID----DDRLAAAADEVLDAFPLLRVNFVDDD-GLWM-RTREN 83 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS-CC----HHHHHHHHHHHHHHCGGGGEEEEESS-SEEE-EECSC
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC-CC----HHHHHHHHHHHHHhchhceeEEEccC-CEEE-EecCC
Confidence 5678888876521 11 1333333333332 22 68999999999999999999988653 5555 44444
Q ss_pred CCCeEEEEEEcCCcCh--hcccCCCCccccccccccccccCCCCCCCCeEEEEEeeeCC-eeEEEeccccccccccchHH
Q 013527 95 MDGVEVAEAVADEIAV--DDLTAEEGTKSFKELIPYYGVLNLEGTHRPLLALQLTKLKD-GMAIGCAFNHAILDGTSTWH 171 (441)
Q Consensus 95 ~~gv~f~~a~~~~~~~--~~l~~~~~~~~~~~l~P~~~~~~~~~~~~P~l~vqvt~~~~-G~~L~~~~~H~v~Dg~g~~~ 171 (441)
.+.+.+......+- +++. ..+....-.+ ++....|++++.+....+ ...|.+.+||.++||.|+..
T Consensus 84 --~~~~~~~d~~~~~~~~~~~~-----~~~~~~~~~~----fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~ 152 (493)
T 4hvm_A 84 --ADALVRSDLRGHPDPQARCV-----ELLRADRDRP----TDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYM 152 (493)
T ss_dssp --CCCEEEEECTTSSSHHHHHH-----HHHHHHHSSC----CCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHH
T ss_pred --CCCceEEECCCCCchHHHHH-----HHHHHHhcCC----CCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHH
Confidence 23333322210000 0010 0011111111 112346899988888777 68999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCcccc-------cccCCc--c-------cC-CCCCCCCCCCCCCCCcccCCCCCeEEEEEE
Q 013527 172 FMSSWAQACNGATSVSVPPFLERT-------KSRNTR--V-------KL-DPSLPPDPHSQSSGDAAAKQEPVLREKVFK 234 (441)
Q Consensus 172 fl~~wa~~~rg~~~~~~~p~~~r~-------~~~~~~--~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 234 (441)
+++.+.+.+.|...+ .++.+-. .+.... . .+ ..+. . ... +. .........+.
T Consensus 153 l~~~l~~~Y~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~-l------~~~-~~-~~~~~~~~~~~ 221 (493)
T 4hvm_A 153 VLGAVWQAYYGRFRP--AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPV-R------GGD-GG-PVGPPETSRLR 221 (493)
T ss_dssp HHHHHHHHHTTCCCG--GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCC-C------C---------CCEEEEEE
T ss_pred HHHHHHHHhCCCCCC--cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCC-C------CCC-CC-CCCCCeeEEEE
Confidence 999999999776522 2211110 010000 0 00 1111 0 000 00 11116778899
Q ss_pred eCHHHHHHHHHHhhhCCCCCCCCCCC--hHHHHHHHHHHHhhhccC-C-------CCCCceEEEEeccCCCcCCCCCCCC
Q 013527 235 FSEAAIDKIKSKVNENGPSDGSKPFS--TFQSLAVHIWRHVTHARS-L-------KPEDYTVFTVFADCRKRVDPPMPDS 304 (441)
Q Consensus 235 ~~~~~l~~Lk~~~~~~~~~~~~~~~S--t~d~l~A~lW~~~~~ar~-~-------~~~~~~~l~~~vd~R~rl~p~lp~~ 304 (441)
++.+..++|++.|+.. .+| .+.++.|.+-..+.+-+. . .......+.+++++|.. +--.+
T Consensus 222 l~~~~~~~l~~~a~~~-------~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~---~~~~~ 291 (493)
T 4hvm_A 222 VPGSRWQALTEPGGPL-------GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDH---LQLGS 291 (493)
T ss_dssp EEHHHHHHHHCC-------------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHH---TTCCS
T ss_pred cCHHHHHHHHHHHHHc-------CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCC---cchhc
Confidence 9999999999888654 478 999999986666555410 0 23456889999999966 23456
Q ss_pred CcccceeceeeeeecccccCCChHHHHHHHHHHHHHh
Q 013527 305 YFGNLIQAIFTVTAAGLLTGNPPEFGASMIQKAIEAH 341 (441)
Q Consensus 305 y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~ 341 (441)
.+|+++......+......+.++.+++..+++.+.+.
T Consensus 292 ~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 292 VVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp BCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHH
T ss_pred CeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHH
Confidence 6777776555555443322356778888877776653
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.48 E-value=1.6e-05 Score=79.58 Aligned_cols=289 Identities=10% Similarity=0.040 Sum_probs=163.6
Q ss_pred CcceeCCCCCccc-----c-cccceeEEEEee-CCCCchhHHHHHHHHHHHHhhhhccCCCcceeeCCCCcEEEEeCCCC
Q 013527 23 RRECQLVTFDLPY-----L-FFYYNQKLLLYR-NGDREFHDAVEKLKDGLKHVLEEFYQLAGKLGKDEEGVFRVEYDDDM 95 (441)
Q Consensus 23 ~~~~~LS~lD~~~-----~-~~~~~~~~~~f~-~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~~ 95 (441)
...+|||+..+.+ + ...|. ..+.|. ....+ .++|+++|.+++..++.|--++....++-.++......
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~-~~~~~~l~g~ld----~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~ 89 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWN-QSSVLYRPEGFD----PKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGG 89 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBE-EEEEEEETTCCC----HHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSS
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcce-eEEEEEcCCCCC----HHHHHHHHHHHHHhChHhheEEecCCCceeeecccccc
Confidence 5678888876521 1 11122 334444 22223 68999999999999999999888653333333332111
Q ss_pred CCeEEEEEEcCC-cChhcccCCCCcccc-ccc-cccccccCCCCCCCCeEEEEEeeeCCeeEEEeccccccccccchHHH
Q 013527 96 DGVEVAEAVADE-IAVDDLTAEEGTKSF-KEL-IPYYGVLNLEGTHRPLLALQLTKLKDGMAIGCAFNHAILDGTSTWHF 172 (441)
Q Consensus 96 ~gv~f~~a~~~~-~~~~~l~~~~~~~~~-~~l-~P~~~~~~~~~~~~P~l~vqvt~~~~G~~L~~~~~H~v~Dg~g~~~f 172 (441)
..+.+.+.+... ...++... .+ +.+ -|. +....|++.+.+....++-.|-+.+||.++||.|+..|
T Consensus 90 ~~~~~~~~d~~~~~~~~~~~~-----~~~~~~~~~f------dl~~~pl~r~~l~~~~~~~~l~l~~HH~i~Dg~S~~~l 158 (466)
T 2xhg_A 90 QLYDFFSYNLTAQPDVQQAIE-----AETQRLHSSM------NLQEGPLVKVALFQTLHGDHLFLAIHHLVVDGISWRIL 158 (466)
T ss_dssp CCCEEEEEECTTCSCHHHHHH-----HHHHHHHTTC------CTTTCCCEEEEEEEETTEEEEEEEEEGGGCCHHHHHHH
T ss_pred ccceeEEEecCCcccHHHHHH-----HHHHHHHhcc------CCCCCCeEEEEEEEcCCCCEEEEEeeeeeechhhHHHH
Confidence 133443332210 00111000 00 111 121 22356899998888887555779999999999999999
Q ss_pred HHHHHHHhc----CCCCCCCCC--Cccccc-------ccCCc----c-----cC-CCCCCCCCCCCCCCCcccCCCCCeE
Q 013527 173 MSSWAQACN----GATSVSVPP--FLERTK-------SRNTR----V-----KL-DPSLPPDPHSQSSGDAAAKQEPVLR 229 (441)
Q Consensus 173 l~~wa~~~r----g~~~~~~~p--~~~r~~-------~~~~~----~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (441)
++.+.+.++ |.. +..+| ..-++. ..... + .+ ..+...-+.. ...+........
T Consensus 159 ~~el~~~Y~~~~~g~~-~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~---~~~~~~~~~~~~ 234 (466)
T 2xhg_A 159 FEDLATGYAQALAGQA-ISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKD---YEVTDCKQKSVR 234 (466)
T ss_dssp HHHHHHHHHHHHTTCC-CCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCS---SCCSSCBGGGEE
T ss_pred HHHHHHHHHHHHcCCC-CCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCcc---ccccccccccce
Confidence 999999875 333 21222 111110 11100 0 00 0111000000 000011123456
Q ss_pred EEEEEeCHHHHHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhccCCCCCCceEEEEeccCCCcCCC-CCCCCCccc
Q 013527 230 EKVFKFSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRVDP-PMPDSYFGN 308 (441)
Q Consensus 230 ~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p-~lp~~y~GN 308 (441)
...+.++.+..++|++.|.... .+|.++++.|.+-..+.+-.+ .....+.+++++|....+ +--.+-+|+
T Consensus 235 ~~~~~l~~~~~~~l~~~~~~~~------~~t~~~~llaa~~~~l~~~~~---~~dv~ig~~~~gR~~~~~~~~~~~~vG~ 305 (466)
T 2xhg_A 235 NMRIRLHPEETEQLLKHANQAY------QTEINDLLLAALGLAFAEWSK---LAQIVIHLEGHGREDIIEQANVARTVGW 305 (466)
T ss_dssp EEEEECCHHHHHHHHHTGGGTT------TCCHHHHHHHHHHHHHHHHHC---CSEEEEEEEECCCCSCSTTCCCTTCCSC
T ss_pred EEEEEcCHHHHHHHHHHhHHhh------CCCHHHHHHHHHHHHHHHHhC---CCceEEEecCCCCCccccCCCccccccc
Confidence 7889999999999998875432 478999999987666655432 356789999999976421 123456677
Q ss_pred ceeceeeeeecccccCCChHHHHHHHHHHHHHhc
Q 013527 309 LIQAIFTVTAAGLLTGNPPEFGASMIQKAIEAHT 342 (441)
Q Consensus 309 ~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~ 342 (441)
++......+.... +.++.+++..+++.+..+.
T Consensus 306 f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 306 FTSQYPVLLDLKQ--TAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp CCEEEEEEEECSC--CCSHHHHHHHHHHHHHHSG
T ss_pred eeeeccEEEecCC--CCCHHHHHHHHHHHHHhCc
Confidence 6655544443322 3468889999999887763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.25 E-value=7.7e-05 Score=84.34 Aligned_cols=289 Identities=12% Similarity=0.060 Sum_probs=161.3
Q ss_pred cceeCCCCCc-------ccc--cccceeEEEEeeCCCCchhHHHHHHHHHHHHhhhhccCCCcceeeCCCC-cEEEEeCC
Q 013527 24 RECQLVTFDL-------PYL--FFYYNQKLLLYRNGDREFHDAVEKLKDGLKHVLEEFYQLAGKLGKDEEG-VFRVEYDD 93 (441)
Q Consensus 24 ~~~~LS~lD~-------~~~--~~~~~~~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g-~~~i~~~~ 93 (441)
..+|||+.-+ ..+ ..|.++..+-++.+ .| .++|++++.+++..++.|--++.....| -.++....
T Consensus 11 d~~PLS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~-ld----~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~ 85 (1304)
T 2vsq_A 11 DMYYLSPMQEGMLFHAILNPGQSFYLEQITMKVKGS-LN----IKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKK 85 (1304)
T ss_dssp EEEECCHHHHHHHHHHHHSTTSCTTEEEEEEEEEEC-CC----HHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESC
T ss_pred CcCCCCHHHHHHHHHHhhCCCCCceEEEEEEEEcCC-cC----HHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCC
Confidence 4677777433 111 22344444444432 22 6899999999999999999888765433 34554443
Q ss_pred CCCCeEEEEEEcCCcChhcccCCCCccccccccccccccCCCCCCCCeEEEEEeeeCC-eeEEEeccccccccccchHHH
Q 013527 94 DMDGVEVAEAVADEIAVDDLTAEEGTKSFKELIPYYGVLNLEGTHRPLLALQLTKLKD-GMAIGCAFNHAILDGTSTWHF 172 (441)
Q Consensus 94 ~~~gv~f~~a~~~~~~~~~l~~~~~~~~~~~l~P~~~~~~~~~~~~P~l~vqvt~~~~-G~~L~~~~~H~v~Dg~g~~~f 172 (441)
. .+.+.+.+....+-.+- ...++.++-......++....|++++.+....+ ...|.+.+||.++||.|+..+
T Consensus 86 ~--~~~~~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l 158 (1304)
T 2vsq_A 86 R--QFHIEEIDLTHLTGSEQ-----TAKINEYKEQDKIRGFDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIV 158 (1304)
T ss_dssp C--CCCEEEEECTTSCHHHH-----HHHHHHHHHHHHHHCCCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHH
T ss_pred C--CCceEEEECCCCCchhH-----HHHHHHHHHHHhcCCCCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHH
Confidence 3 23332222110000000 000111110000001122356999998888776 788999999999999999999
Q ss_pred HHHHHHHhcC----CCCCCCCCC-ccccc---ccCCc---------ccC-CCCCCCCCCCCCCCCcccCCCCCeEEEEEE
Q 013527 173 MSSWAQACNG----ATSVSVPPF-LERTK---SRNTR---------VKL-DPSLPPDPHSQSSGDAAAKQEPVLREKVFK 234 (441)
Q Consensus 173 l~~wa~~~rg----~~~~~~~p~-~~r~~---~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 234 (441)
++.+.+++++ .. ...+|. .-++. +.... ..+ ..+...... ....+...........+.
T Consensus 159 ~~el~~~Y~~~~~g~~-~~l~~~~~y~d~~~~~~~~~~~~~~~yW~~~L~~~~~~~~lp---~~~~~~~~~~~~~~~~~~ 234 (1304)
T 2vsq_A 159 VQDLFKVYNALREQKP-YSLPPVKPYKDYIKWLEKQDKQASLRYWREYLEGFEGQTTFA---EQRKKQKDGYEPKELLFS 234 (1304)
T ss_dssp HHHHHHHHHHHHTTCC-CCCCCCCCTHHHHHHHHTSCHHHHHHHHHHHHTTCCCCCTTT---TTCCCSSCCCCEEEEEEC
T ss_pred HHHHHHHHHHhhcCCC-CCCCCcccHHHHHHHHhcchhhHHHHHHHHHhCCCCccccCC---CCCCccccccCcceEEEe
Confidence 9999998863 22 112221 11111 11110 000 111111000 000001122345677889
Q ss_pred eCHHHHHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhccCCCCCCceEEEEeccCCCcCCCCCCCCCcccceecee
Q 013527 235 FSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHARSLKPEDYTVFTVFADCRKRVDPPMPDSYFGNLIQAIF 314 (441)
Q Consensus 235 ~~~~~l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~~~ 314 (441)
++++..++||+.|+.. .+|.+.++.|.+-..+.|-. ..+...+..+++.|....+. -++-.|+++....
T Consensus 235 l~~~~~~~L~~~a~~~-------~~T~~~vllaa~a~~L~r~t---g~~dvv~G~pvsgR~~~~~~-~~~~vG~fvntlp 303 (1304)
T 2vsq_A 235 PSEAETKAFTELAKSQ-------HTTLSTALQAVWSVLISRYQ---QSGDLAFGTVVSGRPAEIKG-VEHMVGLFINVVP 303 (1304)
T ss_dssp CCHHHHHHHHHHHHHT-------TCCHHHHHHHHHHHHHHHHH---TCSEEEEEEEECCCCTTSTT-GGGCCSSCCEEEE
T ss_pred cCHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHhc---CCCCEEEEEEeCCCCccchh-hhcccccceeEEE
Confidence 9999999999999875 47999999998655555443 24568899999999753221 2355566654444
Q ss_pred eeeecccccCCChHHHHHHHHHHHHHh
Q 013527 315 TVTAAGLLTGNPPEFGASMIQKAIEAH 341 (441)
Q Consensus 315 ~~~~~~~l~~~~l~~~A~~ir~ai~~~ 341 (441)
..+..+. +.++.++...+++.+.+.
T Consensus 304 lr~~~~~--~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 304 RRVKLSE--GITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp EEEECCT--TCBHHHHHHHHHHHHHHH
T ss_pred EEecCCC--CCcHHHHHHHHHHHHHHh
Confidence 4443221 346888888888877653
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.19 E-value=0.00014 Score=73.46 Aligned_cols=246 Identities=13% Similarity=0.078 Sum_probs=135.1
Q ss_pred chhHHHHHHHHHHHHhhhhccCCCcceeeCCCCcEEEEeCCCCC--Ce------EEEEEEcCCcChhccc----------
Q 013527 53 EFHDAVEKLKDGLKHVLEEFYQLAGKLGKDEEGVFRVEYDDDMD--GV------EVAEAVADEIAVDDLT---------- 114 (441)
Q Consensus 53 ~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~~~--gv------~f~~a~~~~~~~~~l~---------- 114 (441)
..++..++|+.|.-.+--++|-+|+++..+..+.+...|..-.+ .+ -|++...+ .+-+|+.
T Consensus 70 ~~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~-~t~~e~~~~~~~~r~~~ 148 (519)
T 3fot_A 70 TLQNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTA-KSALDLWSEMEEGRAAA 148 (519)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECS-CCHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCC-CCHHHHHHhhhhhhccc
Confidence 35678999999999999999999999997643343433321100 01 13333322 3344431
Q ss_pred CCC-Cccc--cccccccccccCCCCCCCCeEEEEEeeeCC--eeEEEeccccccccccchHHHHHHHHHHhcCCC---CC
Q 013527 115 AEE-GTKS--FKELIPYYGVLNLEGTHRPLLALQLTKLKD--GMAIGCAFNHAILDGTSTWHFMSSWAQACNGAT---SV 186 (441)
Q Consensus 115 ~~~-~~~~--~~~l~P~~~~~~~~~~~~P~l~vqvt~~~~--G~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~---~~ 186 (441)
... +.+. +.-+.|. ...+.| +.. -.-|.+.+||.++||.|...|++.+-+...... ..
T Consensus 149 ~~~~p~~~~~l~~v~~~------~~~~~~--------~p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~ 214 (519)
T 3fot_A 149 NDNTPSKSIELFLLSDV------STDSTP--------IPQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDS 214 (519)
T ss_dssp C-CCCCCSCEEEEEESS------SSTTSC--------CCTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CG
T ss_pred ccCCCccceEEEEEecc------cccccc--------CCCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCc
Confidence 000 0000 0000110 000111 333 456778999999999999999999887765321 00
Q ss_pred CCCCCcc--cc--cccCC-cccCCCCCC-CC------CCC---------CCCCCcccCCCCCeEEEEEEeCHHHHHHHHH
Q 013527 187 SVPPFLE--RT--KSRNT-RVKLDPSLP-PD------PHS---------QSSGDAAAKQEPVLREKVFKFSEAAIDKIKS 245 (441)
Q Consensus 187 ~~~p~~~--r~--~~~~~-~~~~~~~~~-~~------~~~---------~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~ 245 (441)
...|.++ -+ .+..+ .....+|.. .. ..+ ...+.+....+..-....+.|+++..++|++
T Consensus 215 ~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~ 294 (519)
T 3fot_A 215 REMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVK 294 (519)
T ss_dssp GGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHH
T ss_pred cCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHH
Confidence 1122221 00 01111 111112210 00 000 0011110111123345788999999999999
Q ss_pred HhhhCCCCCCCCCCChHHHHHHHHHHHhhhccC---CCCCCceEEEEeccCCCcCCCCCCCCCcccceeceeeee
Q 013527 246 KVNENGPSDGSKPFSTFQSLAVHIWRHVTHARS---LKPEDYTVFTVFADCRKRVDPPMPDSYFGNLIQAIFTVT 317 (441)
Q Consensus 246 ~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar~---~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~~~~~~ 317 (441)
.|++.+ +..+|.+.+|.|.+-.++.+... ..........++||+|+++.++...+|||.+.......+
T Consensus 295 ~ck~~~----~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 295 AVKTRL----GPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp HHHHHT----CTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred HHHhcC----CCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeeeeeeeEe
Confidence 999863 34689999998887776665321 112235789999999999976555678888876555444
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=75.15 E-value=1.5 Score=38.40 Aligned_cols=44 Identities=20% Similarity=0.449 Sum_probs=33.3
Q ss_pred CCCeEEEEEeee-CC--eeEEEeccccccccccchHHHHHHHHHHhc
Q 013527 138 HRPLLALQLTKL-KD--GMAIGCAFNHAILDGTSTWHFMSSWAQACN 181 (441)
Q Consensus 138 ~~P~l~vqvt~~-~~--G~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 181 (441)
..|++.+--..- .+ -+-|++++||.++||.-+.+|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 358886521111 23 378999999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=74.25 E-value=1.6 Score=38.28 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=32.1
Q ss_pred CCCeEEE-EEeeeCC--eeEEEeccccccccccchHHHHHHHHHHh
Q 013527 138 HRPLLAL-QLTKLKD--GMAIGCAFNHAILDGTSTWHFMSSWAQAC 180 (441)
Q Consensus 138 ~~P~l~v-qvt~~~~--G~~L~~~~~H~v~Dg~g~~~fl~~wa~~~ 180 (441)
..|++.+ ++..-.+ -+-|++++||.++||.-+.+|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 3588764 1211123 37899999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=73.45 E-value=1.7 Score=38.15 Aligned_cols=43 Identities=19% Similarity=0.352 Sum_probs=33.0
Q ss_pred CCeEEEEEeeeCC---eeEEEeccccccccccchHHHHHHHHHHhc
Q 013527 139 RPLLALQLTKLKD---GMAIGCAFNHAILDGTSTWHFMSSWAQACN 181 (441)
Q Consensus 139 ~P~l~vqvt~~~~---G~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 181 (441)
.|++.+--..-++ =+-|++++||.++||.-+.+|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 5888662222223 278999999999999999999999998764
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=70.86 E-value=2.3 Score=37.94 Aligned_cols=29 Identities=14% Similarity=0.409 Sum_probs=27.1
Q ss_pred eEEEeccccccccccchHHHHHHHHHHhc
Q 013527 153 MAIGCAFNHAILDGTSTWHFMSSWAQACN 181 (441)
Q Consensus 153 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 181 (441)
+-|+++++|.++||.-+..|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998774
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=68.69 E-value=2.5 Score=37.46 Aligned_cols=30 Identities=17% Similarity=0.448 Sum_probs=27.4
Q ss_pred eEEEeccccccccccchHHHHHHHHHHhcC
Q 013527 153 MAIGCAFNHAILDGTSTWHFMSSWAQACNG 182 (441)
Q Consensus 153 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg 182 (441)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999988753
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=68.54 E-value=2.5 Score=37.71 Aligned_cols=29 Identities=7% Similarity=0.338 Sum_probs=26.9
Q ss_pred eEEEeccccccccccchHHHHHHHHHHhc
Q 013527 153 MAIGCAFNHAILDGTSTWHFMSSWAQACN 181 (441)
Q Consensus 153 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 181 (441)
+-|+++++|.++||.-...|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998875
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=68.05 E-value=2.3 Score=37.50 Aligned_cols=31 Identities=16% Similarity=0.338 Sum_probs=28.1
Q ss_pred eeEEEeccccccccccchHHHHHHHHHHhcC
Q 013527 152 GMAIGCAFNHAILDGTSTWHFMSSWAQACNG 182 (441)
Q Consensus 152 G~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg 182 (441)
-+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 186 ~m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 186 YMYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp ECCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999998864
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=67.21 E-value=2.8 Score=37.90 Aligned_cols=29 Identities=24% Similarity=0.529 Sum_probs=26.9
Q ss_pred eEEEeccccccccccchHHHHHHHHHHhc
Q 013527 153 MAIGCAFNHAILDGTSTWHFMSSWAQACN 181 (441)
Q Consensus 153 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 181 (441)
+-|+++++|.++||.-...|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998874
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=61.00 E-value=4.3 Score=36.49 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=27.6
Q ss_pred eEEEeccccccccccchHHHHHHHHHHhcC
Q 013527 153 MAIGCAFNHAILDGTSTWHFMSSWAQACNG 182 (441)
Q Consensus 153 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg 182 (441)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998864
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=59.68 E-value=4.7 Score=36.10 Aligned_cols=29 Identities=28% Similarity=0.658 Sum_probs=27.0
Q ss_pred eEEEeccccccccccchHHHHHHHHHHhc
Q 013527 153 MAIGCAFNHAILDGTSTWHFMSSWAQACN 181 (441)
Q Consensus 153 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 181 (441)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 233 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIE 233 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHh
Confidence 56999999999999999999999999875
No 23
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=58.74 E-value=16 Score=27.98 Aligned_cols=45 Identities=16% Similarity=0.346 Sum_probs=34.1
Q ss_pred EEEEeeCCCCchhHHHHHHHHHHHHhhhhccCCCcceeeC-CCCcEEEEeCC
Q 013527 43 KLLLYRNGDREFHDAVEKLKDGLKHVLEEFYQLAGKLGKD-EEGVFRVEYDD 93 (441)
Q Consensus 43 ~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~-~~g~~~i~~~~ 93 (441)
+...|+.++ ++.|.++|.+.+.+-..+||.+... +.+++.|..++
T Consensus 85 m~i~f~gdd------lea~ekalkemirqarkfagtvtytl~gn~l~i~itg 130 (170)
T 4hhu_A 85 MVIVFEGDD------LEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITG 130 (170)
T ss_dssp EEEEEECSC------HHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEES
T ss_pred EEEEEecCc------HHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeC
Confidence 556677432 6889999999999999999999864 34567776654
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=55.62 E-value=16 Score=27.98 Aligned_cols=45 Identities=16% Similarity=0.346 Sum_probs=33.9
Q ss_pred EEEEeeCCCCchhHHHHHHHHHHHHhhhhccCCCcceeeC-CCCcEEEEeCC
Q 013527 43 KLLLYRNGDREFHDAVEKLKDGLKHVLEEFYQLAGKLGKD-EEGVFRVEYDD 93 (441)
Q Consensus 43 ~~~~f~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~-~~g~~~i~~~~ 93 (441)
+...|+.++ ++.|.++|.+.+.+-..+||.+... +.+++.|..++
T Consensus 4 m~i~f~gdd------lea~ekalkemirqarkfagtvtytl~gn~l~i~itg 49 (170)
T 4hhu_A 4 MVIVFEGDD------LEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITG 49 (170)
T ss_dssp EEEEEECSC------HHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEES
T ss_pred EEEEEecCc------HHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeC
Confidence 456777533 6889999999999999999999854 34567776553
No 25
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=45.65 E-value=62 Score=21.24 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=30.0
Q ss_pred CCeEEEEEEeCHHHHHHHHHHhhhCCCCCCCCCCChHHHHHHHHHHHhhhcc
Q 013527 226 PVLREKVFKFSEAAIDKIKSKVNENGPSDGSKPFSTFQSLAVHIWRHVTHAR 277 (441)
Q Consensus 226 ~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~ar 277 (441)
.+.-...|+||+++.+.|.+.|..+.. | +..++=|.|.++-
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE~e-------S----V~sfIKR~IlK~l 53 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEEVE-------S----VNSFVKRHILKTI 53 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTTCS-------C----HHHHHHHHHHHHH
T ss_pred ccceEEEEEecHHHHHHHHHHHHHHHH-------H----HHHHHHHHHHHHH
Confidence 455678999999999999999987652 2 4555555555544
No 26
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=43.94 E-value=4.8 Score=39.18 Aligned_cols=29 Identities=17% Similarity=0.444 Sum_probs=0.0
Q ss_pred eEEEeccccccccccchHHHHHHHHHHhc
Q 013527 153 MAIGCAFNHAILDGTSTWHFMSSWAQACN 181 (441)
Q Consensus 153 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 181 (441)
+-|++++||.++||.-...|++.+.+.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 45999999999999999999999988775
No 27
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=42.88 E-value=62 Score=20.45 Aligned_cols=23 Identities=26% Similarity=0.397 Sum_probs=20.4
Q ss_pred EEEEEEeCHHHHHHHHHHhhhCC
Q 013527 229 REKVFKFSEAAIDKIKSKVNENG 251 (441)
Q Consensus 229 ~~~~f~~~~~~l~~Lk~~~~~~~ 251 (441)
.+..|+||+++-+.|++.|..+.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~ 24 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE 24 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT
T ss_pred ceEEEEecHHHHHHHHHHHHHHH
Confidence 45789999999999999998875
No 28
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=40.67 E-value=81 Score=21.17 Aligned_cols=36 Identities=14% Similarity=0.326 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhhhhccCCCcceeeC-CCCcEEEEeCC
Q 013527 58 VEKLKDGLKHVLEEFYQLAGKLGKD-EEGVFRVEYDD 93 (441)
Q Consensus 58 ~~~L~~sL~~~L~~~p~LaGrl~~~-~~g~~~i~~~~ 93 (441)
++...++|.+.+.+-..+||.+... ..+.++|...+
T Consensus 12 leafekalkemirqarkfagtvtytldgndleiritg 48 (85)
T 2kl8_A 12 LEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITG 48 (85)
T ss_dssp HHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEec
Confidence 6788899999999999999999854 33457776653
No 29
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=36.87 E-value=21 Score=18.61 Aligned_cols=19 Identities=26% Similarity=0.620 Sum_probs=15.6
Q ss_pred CCCChHHHHHHHHHHHhhh
Q 013527 257 KPFSTFQSLAVHIWRHVTH 275 (441)
Q Consensus 257 ~~~St~d~l~A~lW~~~~~ 275 (441)
.-++..|-|+-++|+.+..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 3478899999999998754
Done!