Query 013531
Match_columns 441
No_of_seqs 186 out of 254
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 12:20:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013531.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013531hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gs9a_ a.24.1.1 (A:) Apolipop 98.5 2E-08 1.5E-12 87.1 2.8 89 255-347 53-141 (144)
2 d1gs9a_ a.24.1.1 (A:) Apolipop 98.5 5.9E-08 4.3E-12 84.1 5.6 94 262-359 38-131 (144)
3 d1fxkc_ a.2.5.1 (C:) Prefoldin 92.7 1.1 8.2E-05 36.2 13.2 40 46-92 2-41 (133)
4 d1fxkc_ a.2.5.1 (C:) Prefoldin 86.8 3.7 0.00027 32.9 11.5 20 78-97 20-39 (133)
5 d2ap3a1 a.24.27.1 (A:12-196) H 86.8 3.8 0.00027 31.9 11.4 24 47-70 24-47 (185)
6 d1seta1 a.2.7.1 (A:1-110) Sery 86.1 5.4 0.00039 31.1 11.8 14 87-100 35-48 (110)
7 d1fxka_ a.2.5.1 (A:) Prefoldin 85.4 6.2 0.00045 30.7 11.8 6 91-96 12-17 (107)
8 d1seta1 a.2.7.1 (A:1-110) Sery 84.6 2.5 0.00018 33.2 9.1 28 73-100 28-55 (110)
9 d1gqea_ e.38.1.1 (A:) Polypept 80.8 6.8 0.00049 37.2 12.2 15 50-64 4-18 (362)
10 d1qvra2 c.37.1.20 (A:149-535) 78.9 6 0.00044 37.7 11.1 22 45-66 253-274 (387)
11 d1qvra2 c.37.1.20 (A:149-535) 75.8 26 0.0019 33.1 14.8 50 80-136 253-302 (387)
12 d1fxka_ a.2.5.1 (A:) Prefoldin 74.9 16 0.0012 28.1 11.1 15 49-63 12-26 (107)
13 d1lrza1 a.2.7.4 (A:245-309) Me 69.3 17 0.0012 26.2 8.9 16 153-168 39-54 (65)
14 d1ivsa1 a.2.7.3 (A:797-862) Va 61.2 11 0.00081 26.7 6.5 28 121-148 2-29 (66)
15 d1vcsa1 a.47.2.1 (A:8-96) Vesi 57.9 34 0.0025 25.7 10.2 58 68-132 26-83 (89)
16 d1ivsa1 a.2.7.3 (A:797-862) Va 55.9 16 0.0012 25.8 6.6 22 80-101 4-25 (66)
17 d1gqea_ e.38.1.1 (A:) Polypept 49.1 80 0.0059 29.3 12.3 17 44-60 5-21 (362)
18 d1nkpa_ a.38.1.1 (A:) Myc prot 47.5 41 0.003 24.6 8.1 19 113-131 49-67 (88)
19 d1nkpb_ a.38.1.1 (B:) Max prot 41.3 33 0.0024 24.9 6.5 16 48-63 15-30 (83)
20 d1nkpa_ a.38.1.1 (A:) Myc prot 40.5 55 0.004 23.9 7.8 52 47-98 18-70 (88)
21 d1lrza1 a.2.7.4 (A:245-309) Me 38.1 63 0.0046 23.0 8.9 23 112-134 33-55 (65)
22 d1u5pa1 a.7.1.1 (A:1662-1771) 36.0 73 0.0053 23.1 13.4 29 149-177 79-107 (110)
23 d1ykhb1 a.252.1.1 (B:2-130) RN 32.7 1.1E+02 0.0081 24.2 9.9 15 78-92 61-75 (129)
24 d1quua1 a.7.1.1 (A:1-124) alph 31.4 94 0.0068 23.0 13.2 29 149-177 92-120 (124)
25 d1s5qb_ a.59.1.1 (B:) Sin3A {M 31.2 18 0.0013 27.1 3.5 40 336-381 16-76 (89)
26 d1owaa_ a.7.1.1 (A:) Spectrin 31.2 1.1E+02 0.0077 23.5 15.0 55 43-98 24-78 (156)
27 d1cuna2 a.7.1.1 (A:116-219) Sp 29.1 94 0.0068 22.2 11.3 26 149-174 74-99 (104)
28 d1cuna2 a.7.1.1 (A:116-219) Sp 24.4 1.2E+02 0.0084 21.7 14.4 24 123-146 37-60 (104)
29 d1u5pa2 a.7.1.1 (A:1772-1872) 24.3 1.1E+02 0.0081 21.5 8.7 55 115-169 37-95 (101)
30 d2f05a1 a.59.1.1 (A:1-85) Sin3 24.1 40 0.0029 24.8 4.3 40 336-381 13-70 (85)
31 d1nkpb_ a.38.1.1 (B:) Max prot 23.9 1E+02 0.0073 22.1 6.6 26 113-138 44-69 (83)
32 d1x4ta1 a.2.15.1 (A:7-86) Pre- 23.6 1.3E+02 0.0095 22.2 7.1 37 86-131 25-61 (80)
33 d1vcsa1 a.47.2.1 (A:8-96) Vesi 23.3 1.3E+02 0.0098 22.1 8.3 10 91-100 13-22 (89)
34 d1vp7a_ a.7.13.1 (A:) Exonucle 23.1 71 0.0052 22.8 5.4 24 77-100 14-37 (68)
35 d1nyra1 c.51.1.1 (A:533-645) T 22.5 9.3 0.00068 29.5 0.2 12 201-212 1-12 (113)
36 d1u5pa1 a.7.1.1 (A:1662-1771) 21.2 1.4E+02 0.0099 21.4 11.6 25 46-70 3-27 (110)
37 d1nlwa_ a.38.1.1 (A:) Mad prot 20.9 1.1E+02 0.0078 21.7 6.2 13 49-61 15-27 (79)
38 d1nlwa_ a.38.1.1 (A:) Mad prot 20.5 1.1E+02 0.008 21.6 6.2 30 113-142 44-73 (79)
39 d2azeb1 e.63.1.2 (B:201-301) T 20.4 1.1E+02 0.0077 23.4 6.3 41 124-164 2-42 (101)
No 1
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=98.48 E-value=2e-08 Score=87.11 Aligned_cols=89 Identities=11% Similarity=0.123 Sum_probs=46.1
Q ss_pred hHHHHHhhhhhhHHHHHHhhhcccchhHHHhhhHHHHHHHHhhhhcchhHHhhhhhcchhHHHHhhhhhhHHHHHHhhcC
Q 013531 255 HVETIKAKWIPAVKEQWVVFTTNVEPHVQTLKTKTIEACEATKTAVTPHIIRVQEVVDPYFQEAKKFSKPYIDQVATVAK 334 (441)
Q Consensus 255 ~l~~~~~K~~pv~~~~w~~~~~~v~p~Ve~~ktk~~p~~ea~r~~~~phv~~vk~~v~Py~~e~ke~~~py~~qa~~~sk 334 (441)
+++.+..++.|++.+ ++..+.++++.++..+.|..+.+|+.+.||+..+++.+.|++++++..+.||.++.++-..
T Consensus 53 ~~~~l~~~l~p~~~e----~~~~l~~~~e~lr~~l~~~lee~r~kl~~~~eel~~~~~~~~ee~r~~l~p~~eel~~~l~ 128 (144)
T d1gs9a_ 53 YKSELEEQLTPVAEE----TRARLSKELQAAQARLGADMEDVRGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLL 128 (144)
T ss_dssp HHHHHTTSCCCCCSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555544 4444444555555555555555555555555555555555555555555555555555555
Q ss_pred cchHhHHHhhccc
Q 013531 335 PHVDNVRVALKPY 347 (441)
Q Consensus 335 P~vdkv~~~~~Py 347 (441)
++++.++..+.||
T Consensus 129 ~~~eel~~kL~py 141 (144)
T d1gs9a_ 129 RDADDLQKRLAVY 141 (144)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHhhCc
Confidence 5555555555554
No 2
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=98.47 E-value=5.9e-08 Score=84.08 Aligned_cols=94 Identities=12% Similarity=0.151 Sum_probs=63.3
Q ss_pred hhhhhHHHHHHhhhcccchhHHHhhhHHHHHHHHhhhhcchhHHhhhhhcchhHHHHhhhhhhHHHHHHhhcCcchHhHH
Q 013531 262 KWIPAVKEQWVVFTTNVEPHVQTLKTKTIEACEATKTAVTPHIIRVQEVVDPYFQEAKKFSKPYIDQVATVAKPHVDNVR 341 (441)
Q Consensus 262 K~~pv~~~~w~~~~~~v~p~Ve~~ktk~~p~~ea~r~~~~phv~~vk~~v~Py~~e~ke~~~py~~qa~~~skP~vdkv~ 341 (441)
++.|.+.+ ....+.+|++.++.++.|+++.+++.+.+.++.+++.+.|++++++..+.||.++++....|+++.++
T Consensus 38 el~~~l~e----~~~~l~~~~~~l~~~l~p~~~e~~~~l~~~~e~lr~~l~~~lee~r~kl~~~~eel~~~~~~~~ee~r 113 (144)
T d1gs9a_ 38 ELRALMDE----TMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDVRGRLVQYRGEVQAMLGQSTEELR 113 (144)
T ss_dssp HHHHHHHH----HHHHHHHHHHHHTTSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCHHHH
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555 44455566666666666666666677777777777777777777777777777777777777777777
Q ss_pred HhhcccHHHHHHHHHHHH
Q 013531 342 VALKPYTKKVVRAYGKFL 359 (441)
Q Consensus 342 ~~~~Py~e~v~~~~k~~~ 359 (441)
..+.||++.++..+.+.+
T Consensus 114 ~~l~p~~eel~~~l~~~~ 131 (144)
T d1gs9a_ 114 VRLASHLRKLRKRLLRDA 131 (144)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777777777766655554
No 3
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=92.73 E-value=1.1 Score=36.17 Aligned_cols=40 Identities=13% Similarity=0.214 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHhhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 013531 46 ELDQLKSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERIVSL 92 (441)
Q Consensus 46 el~~l~~~i~~Les~i~~~~~~i~~k~~~l~~ke~~i~ek~~~I~~l 92 (441)
.|.+|...+..|+..|+.+.+++.. .+..+.|....+..+
T Consensus 2 ~L~eL~~~~~~l~~~l~~l~~~i~~-------l~~~~~e~~~~~~~L 41 (133)
T d1fxkc_ 2 ALAEIVAQLNIYQSQVELIQQQMEA-------VRATISELEILEKTL 41 (133)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 3556666666666666666555554 555555544444443
No 4
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=86.82 E-value=3.7 Score=32.88 Aligned_cols=20 Identities=10% Similarity=0.069 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 013531 78 KEKAIQDKSERIVSLQKELS 97 (441)
Q Consensus 78 ke~~i~ek~~~I~~l~~ei~ 97 (441)
+...|......+.++++-++
T Consensus 20 l~~~i~~l~~~~~e~~~~~~ 39 (133)
T d1fxkc_ 20 IQQQMEAVRATISELEILEK 39 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444443333
No 5
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=86.78 E-value=3.8 Score=31.90 Aligned_cols=24 Identities=17% Similarity=0.360 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHhhHHHHhhhhcc
Q 013531 47 LDQLKSKIRSLESHIDEKTQELKG 70 (441)
Q Consensus 47 l~~l~~~i~~Les~i~~~~~~i~~ 70 (441)
+..+..++..|+..+..+..++..
T Consensus 24 ~~~~~~k~~~~e~~~~~~~~~~~~ 47 (185)
T d2ap3a1 24 IKTVGKKIAELDEKKKKLTEDVNS 47 (185)
T ss_dssp HHHHHHHHHHHHHHHHTTTTGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555544443
No 6
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=86.07 E-value=5.4 Score=31.07 Aligned_cols=14 Identities=29% Similarity=0.491 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHhh
Q 013531 87 ERIVSLQKELSSLQ 100 (441)
Q Consensus 87 ~~I~~l~~ei~sLq 100 (441)
....+++.+++.|+
T Consensus 35 ~~rr~l~~~~e~l~ 48 (110)
T d1seta1 35 REVQELKKRLQEVQ 48 (110)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444444
No 7
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=85.42 E-value=6.2 Score=30.70 Aligned_cols=6 Identities=33% Similarity=0.495 Sum_probs=2.2
Q ss_pred HHHHHH
Q 013531 91 SLQKEL 96 (441)
Q Consensus 91 ~l~~ei 96 (441)
.++.++
T Consensus 12 ~lq~el 17 (107)
T d1fxka_ 12 QLQQQA 17 (107)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 8
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=84.62 E-value=2.5 Score=33.16 Aligned_cols=28 Identities=18% Similarity=0.359 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013531 73 EVVAQKEKAIQDKSERIVSLQKELSSLQ 100 (441)
Q Consensus 73 ~~l~~ke~~i~ek~~~I~~l~~ei~sLq 100 (441)
+.+-.++....+....+.+|+++...+.
T Consensus 28 d~i~~ld~~rr~l~~~~e~l~~~rN~~s 55 (110)
T d1seta1 28 EALLALDREVQELKKRLQEVQTERNQVA 55 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444445555555555544443
No 9
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=80.82 E-value=6.8 Score=37.19 Aligned_cols=15 Identities=20% Similarity=0.353 Sum_probs=7.2
Q ss_pred HHHHHHHHHhhHHHH
Q 013531 50 LKSKIRSLESHIDEK 64 (441)
Q Consensus 50 l~~~i~~Les~i~~~ 64 (441)
++.+|..|...+..+
T Consensus 4 l~~~i~eL~~rl~~L 18 (362)
T d1gqea_ 4 VNNRIQDLTERSDVL 18 (362)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 444455554444444
No 10
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=78.88 E-value=6 Score=37.72 Aligned_cols=22 Identities=27% Similarity=0.279 Sum_probs=12.2
Q ss_pred HhHHHHHHHHHHHHhhHHHHhh
Q 013531 45 IELDQLKSKIRSLESHIDEKTQ 66 (441)
Q Consensus 45 ~el~~l~~~i~~Les~i~~~~~ 66 (441)
.+++.+..+|.+|+.++..+..
T Consensus 253 ~el~~ler~I~qLe~E~~aL~k 274 (387)
T d1qvra2 253 EEIDALERKKLQLEIEREALKK 274 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4555555556665555555544
No 11
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=75.79 E-value=26 Score=33.05 Aligned_cols=50 Identities=24% Similarity=0.369 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 80 KAIQDKSERIVSLQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQ 136 (441)
Q Consensus 80 ~~i~ek~~~I~~l~~ei~sLq~~~~~~~~~~~~~a~~~~~eLe~eVe~Lkkeie~~e 136 (441)
..|.+.+..|..++.++.+|.+....+..+ +..+++.++..|+.++..++
T Consensus 253 ~el~~ler~I~qLe~E~~aL~ke~d~~s~~-------rl~~le~el~~lee~~~~L~ 302 (387)
T d1qvra2 253 EEIDALERKKLQLEIEREALKKEKDPDSQE-------RLKAIEAEIAKLTEEIAKLR 302 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSHHHHS-------CTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHH-------HHhhhhhhhhHHHHHHHHHH
Confidence 445666678888888888887666554444 45555555555544444443
No 12
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=74.90 E-value=16 Score=28.14 Aligned_cols=15 Identities=13% Similarity=0.304 Sum_probs=6.1
Q ss_pred HHHHHHHHHHhhHHH
Q 013531 49 QLKSKIRSLESHIDE 63 (441)
Q Consensus 49 ~l~~~i~~Les~i~~ 63 (441)
.++.++..+.++|..
T Consensus 12 ~lq~el~~~~~q~~~ 26 (107)
T d1fxka_ 12 QLQQQAQAISVQKQT 26 (107)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444443
No 13
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=69.26 E-value=17 Score=26.21 Aligned_cols=16 Identities=13% Similarity=0.212 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHH
Q 013531 153 ISDLSAKLEKLQKIND 168 (441)
Q Consensus 153 leELekklEeLek~~a 168 (441)
+.+|+..++..+..+.
T Consensus 39 ~~el~~Q~~s~~~ki~ 54 (65)
T d1lrza1 39 RDNLQQQLDANEQKIE 54 (65)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444443333
No 14
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=61.23 E-value=11 Score=26.70 Aligned_cols=28 Identities=11% Similarity=0.016 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 121 LEKQIDNLKKESEKQQKEKEALEARAIE 148 (441)
Q Consensus 121 Le~eVe~Lkkeie~~ek~~eeLEark~e 148 (441)
+++++..|.+.++.++.++..++.+.+.
T Consensus 2 ~~~E~~RL~K~l~kl~~~i~~~~~kL~N 29 (66)
T d1ivsa1 2 VEEWRRRQEKRLKELLALAERSQRKLAS 29 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4566666666666666666666666553
No 15
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.88 E-value=34 Score=25.69 Aligned_cols=58 Identities=16% Similarity=0.269 Sum_probs=39.7
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchhhHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 013531 68 LKGKDEVVAQKEKAIQDKSERIVSLQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKES 132 (441)
Q Consensus 68 i~~k~~~l~~ke~~i~ek~~~I~~l~~ei~sLq~~~~~~~~~~~~~a~~~~~eLe~eVe~Lkkei 132 (441)
-.+|...|...+..+.|....|..|.-|+.++... .-..-++++..-...++.|++++
T Consensus 26 geerk~~l~~ie~~leEA~ell~qMelEvr~~p~s-------~R~~~~~klr~Yk~dl~~lk~el 83 (89)
T d1vcsa1 26 PDEKKQMVANVEKQLEEARELLEQMDLEVREIPPQ-------SRGMYSNRMRSYKQEMGKLETDF 83 (89)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT-------THHHHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688899999999999999999999999888521 11233444555555555554444
No 16
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=55.89 E-value=16 Score=25.81 Aligned_cols=22 Identities=14% Similarity=0.102 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 013531 80 KAIQDKSERIVSLQKELSSLQK 101 (441)
Q Consensus 80 ~~i~ek~~~I~~l~~ei~sLq~ 101 (441)
..+..+++.+..++.+|..+++
T Consensus 4 ~E~~RL~K~l~kl~~~i~~~~~ 25 (66)
T d1ivsa1 4 EWRRRQEKRLKELLALAERSQR 25 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555555543
No 17
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=49.06 E-value=80 Score=29.29 Aligned_cols=17 Identities=12% Similarity=0.188 Sum_probs=8.6
Q ss_pred hHhHHHHHHHHHHHHhh
Q 013531 44 KIELDQLKSKIRSLESH 60 (441)
Q Consensus 44 ~~el~~l~~~i~~Les~ 60 (441)
..++..|+..+..|+..
T Consensus 5 ~~~i~eL~~rl~~Lr~~ 21 (362)
T d1gqea_ 5 NNRIQDLTERSDVLRGY 21 (362)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34455555555555543
No 18
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.49 E-value=41 Score=24.63 Aligned_cols=19 Identities=26% Similarity=0.190 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013531 113 KAHARADELEKQIDNLKKE 131 (441)
Q Consensus 113 ~a~~~~~eLe~eVe~Lkke 131 (441)
.|..-+..|+.+++.|..+
T Consensus 49 ~A~~yI~~L~~~~~~l~~~ 67 (88)
T d1nkpa_ 49 KATAYILSVQAEEQKLISE 67 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444333
No 19
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.26 E-value=33 Score=24.93 Aligned_cols=16 Identities=25% Similarity=0.493 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHhhHHH
Q 013531 48 DQLKSKIRSLESHIDE 63 (441)
Q Consensus 48 ~~l~~~i~~Les~i~~ 63 (441)
+.++..+..|.+-|-.
T Consensus 15 ~~in~~f~~L~~llP~ 30 (83)
T d1nkpb_ 15 DHIKDSFHSLRDSVPS 30 (83)
T ss_dssp HHHHHHHHHHHTTSGG
T ss_pred HHHHHHHHHHHHHhCC
Confidence 4455556666665543
No 20
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.49 E-value=55 Score=23.87 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhhHHHHhhhh-cchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 47 LDQLKSKIRSLESHIDEKTQEL-KGKDEVVAQKEKAIQDKSERIVSLQKELSS 98 (441)
Q Consensus 47 l~~l~~~i~~Les~i~~~~~~i-~~k~~~l~~ke~~i~ek~~~I~~l~~ei~s 98 (441)
-+.++..+..|.+-|-.....- -+|-..|..--+.|..+.+.+..+..++..
T Consensus 18 R~~in~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~ 70 (88)
T d1nkpa_ 18 RNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDL 70 (88)
T ss_dssp HHHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666677766664332211 233334444344444444433333333333
No 21
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=38.06 E-value=63 Score=22.99 Aligned_cols=23 Identities=35% Similarity=0.588 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 013531 112 DKAHARADELEKQIDNLKKESEK 134 (441)
Q Consensus 112 ~~a~~~~~eLe~eVe~Lkkeie~ 134 (441)
.|+.-+..+|+.|++.+..-|..
T Consensus 33 kK~~nk~~el~~Q~~s~~~ki~E 55 (65)
T d1lrza1 33 KKAHNKRDNLQQQLDANEQKIEE 55 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555443333
No 22
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=35.97 E-value=73 Score=23.06 Aligned_cols=29 Identities=7% Similarity=0.423 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 149 AEKKISDLSAKLEKLQKINDEQKSKIRKT 177 (441)
Q Consensus 149 LEkkleELekklEeLek~~aEQk~qIeel 177 (441)
+..++.+++..-+.+.....+....+++.
T Consensus 79 i~~~~~~l~~~w~~l~~~~~~R~~~L~ea 107 (110)
T d1u5pa1 79 VKDKRETINGRFQRIKSMAAARRAKLNES 107 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555555555555443
No 23
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.67 E-value=1.1e+02 Score=24.20 Aligned_cols=15 Identities=27% Similarity=0.191 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHH
Q 013531 78 KEKAIQDKSERIVSL 92 (441)
Q Consensus 78 ke~~i~ek~~~I~~l 92 (441)
+-..|-.+++.|..|
T Consensus 61 lA~dii~kakqId~L 75 (129)
T d1ykhb1 61 LSTDIILKTRQINKL 75 (129)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHH
Confidence 344444555555555
No 24
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.42 E-value=94 Score=22.98 Aligned_cols=29 Identities=3% Similarity=0.351 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 149 AEKKISDLSAKLEKLQKINDEQKSKIRKT 177 (441)
Q Consensus 149 LEkkleELekklEeLek~~aEQk~qIeel 177 (441)
+..++.+++..-+.+.....+.+.++++.
T Consensus 92 i~~~~~~l~~rW~~L~~~~~~R~~~L~~a 120 (124)
T d1quua1 92 VNDRCQKICDQWDRLGTLTQKRREALERM 120 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555555555444444443
No 25
>d1s5qb_ a.59.1.1 (B:) Sin3A {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.22 E-value=18 Score=27.14 Aligned_cols=40 Identities=30% Similarity=0.565 Sum_probs=32.5
Q ss_pred chHhHHHhh--cccHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHhcC
Q 013531 336 HVDNVRVAL--KPYTKKVVRAYGKFLKSATTYHH-------------------QVQASVQEMLKKHE 381 (441)
Q Consensus 336 ~vdkv~~~~--~Py~e~v~~~~k~~~~~a~~~H~-------------------q~Q~~v~~~l~~~e 381 (441)
|+++|+... .| .+|..|++.-+.|++ .|..-|++.++.|+
T Consensus 16 yl~kVK~~f~d~p------~~Y~~FL~il~~f~~~~~~~~~~~~~~~~~~~~~~v~~rV~~Lf~~hp 76 (89)
T d1s5qb_ 16 YVNKIKNRFQGQP------DIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQE 76 (89)
T ss_dssp HHHHHHHHTTTCH------HHHHHHHHHHHHHHHHHHHHHHSCSCCCCSCCHHHHHHHHHHHSCSCH
T ss_pred HHHHHHHHHccCh------HHHHHHHHHHHHHHHhhhccccccccccccccHHHHHHHHHHHHccCH
Confidence 566777776 45 489999999999986 58888999998886
No 26
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.18 E-value=1.1e+02 Score=23.49 Aligned_cols=55 Identities=13% Similarity=0.218 Sum_probs=38.3
Q ss_pred hhHhHHHHHHHHHHHHhhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 43 LKIELDQLKSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERIVSLQKELSS 98 (441)
Q Consensus 43 ~~~el~~l~~~i~~Les~i~~~~~~i~~k~~~l~~ke~~i~ek~~~I~~l~~ei~s 98 (441)
....++.|..+-.+|.....++...|.. ...+.+......+...-|.+.+..+.+
T Consensus 24 i~~~~~~l~~rw~~L~~~~~~R~~~Le~-~~~~~~F~~~~~~l~~Wl~e~e~~~~~ 78 (156)
T d1owaa_ 24 IQERRQEVLTRYQSFKERVAERGQKLED-SYHLQVFKRDADDLGKWIMEKVNILTD 78 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCSCS-CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4556677888888888888888888876 344556666666666666666655554
No 27
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=29.08 E-value=94 Score=22.25 Aligned_cols=26 Identities=27% Similarity=0.461 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 149 AEKKISDLSAKLEKLQKINDEQKSKI 174 (441)
Q Consensus 149 LEkkleELekklEeLek~~aEQk~qI 174 (441)
+..++.+++..-+.|.......+..+
T Consensus 74 I~~~~~~l~~~w~~L~~~~~~R~~~L 99 (104)
T d1cuna2 74 ITAKMKGLKGKVSDLEKAAAQRKAKL 99 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444444444333
No 28
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.35 E-value=1.2e+02 Score=21.70 Aligned_cols=24 Identities=8% Similarity=0.152 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 123 KQIDNLKKESEKQQKEKEALEARA 146 (441)
Q Consensus 123 ~eVe~Lkkeie~~ek~~eeLEark 146 (441)
++...++++++.....+..+....
T Consensus 37 ~~h~~~~~ei~~~~~~~~~l~~~g 60 (104)
T d1cuna2 37 KKHEAFETDFTVHKDRVNDVCANG 60 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHH
Confidence 344444444444444444444333
No 29
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.28 E-value=1.1e+02 Score=21.49 Aligned_cols=55 Identities=9% Similarity=0.213 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Q 013531 115 HARADELEKQIDNLKKESEKQQKEKEALEARA----IEAEKKISDLSAKLEKLQKINDE 169 (441)
Q Consensus 115 ~~~~~eLe~eVe~Lkkeie~~ek~~eeLEark----~eLEkkleELekklEeLek~~aE 169 (441)
-.+-..++..++..+..++.+....+.+.... ..+..++++++..-+.|......
T Consensus 37 l~~h~~~~~~i~~~~~~~~~l~~~~~~l~~~~~~~~~~I~~~~~~l~~~w~~L~~~~~~ 95 (101)
T d1u5pa2 37 RKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAA 95 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555555555555544321 22444445555555444444433
No 30
>d2f05a1 a.59.1.1 (A:1-85) Sin3B {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.12 E-value=40 Score=24.83 Aligned_cols=40 Identities=25% Similarity=0.548 Sum_probs=31.7
Q ss_pred chHhHHHhh--cccHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHhcC
Q 013531 336 HVDNVRVAL--KPYTKKVVRAYGKFLKSATTYHHQ----------------VQASVQEMLKKHE 381 (441)
Q Consensus 336 ~vdkv~~~~--~Py~e~v~~~~k~~~~~a~~~H~q----------------~Q~~v~~~l~~~e 381 (441)
|+++|+... .| ..|..|+.....|+.. |..-|..+++.|+
T Consensus 13 yl~kVK~rf~~~p------~~Y~~FL~il~~f~~~~i~~~~~~~~~~~~~ev~~~V~~Lf~~hp 70 (85)
T d2f05a1 13 YVNKIKTRFLDHP------EIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQE 70 (85)
T ss_dssp HHHHHHHHTTTCH------HHHHHHHHHHHHHHHHHSSSSSSSSCCCCHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHccCH------HHHHHHHHHHHHHHHhhccccccccccCCHHHHHHHHHHHHccCH
Confidence 556666665 34 5899999999999874 8889999999987
No 31
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.93 E-value=1e+02 Score=22.07 Aligned_cols=26 Identities=8% Similarity=0.206 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 113 KAHARADELEKQIDNLKKESEKQQKE 138 (441)
Q Consensus 113 ~a~~~~~eLe~eVe~Lkkeie~~ek~ 138 (441)
.|..-+..|..++..|..+++.+..+
T Consensus 44 ~A~~yI~~L~~~~~~l~~~~~~l~~~ 69 (83)
T d1nkpb_ 44 KATEYIQYMRRKNHTHQQDIDDLKRQ 69 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445555555444444443333
No 32
>d1x4ta1 a.2.15.1 (A:7-86) Pre-mRNA-splicing factor ISY1 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.62 E-value=1.3e+02 Score=22.23 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHhhHHHHHHHHHHHHHHHHHHHHH
Q 013531 86 SERIVSLQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKE 131 (441)
Q Consensus 86 ~~~I~~l~~ei~sLq~~~~~~~~~~~~~a~~~~~eLe~eVe~Lkke 131 (441)
...|.+....|+-+|+.+.+ +-++.+|++++.+|=.+
T Consensus 25 ~~iikEI~~kvs~Iqn~~L~---------e~~IRdLNDeINkL~re 61 (80)
T d1x4ta1 25 RQIIGEISKKVAQIQNAGLG---------EFRIRDLNDEINKLLRE 61 (80)
T ss_dssp HHHHHHHHHHHHHHHHCCSC---------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCC---------HHHHHHHHHHHHHHHHH
Confidence 45555566666666765543 22455555555555333
No 33
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.31 E-value=1.3e+02 Score=22.10 Aligned_cols=10 Identities=0% Similarity=0.322 Sum_probs=3.9
Q ss_pred HHHHHHHHhh
Q 013531 91 SLQKELSSLQ 100 (441)
Q Consensus 91 ~l~~ei~sLq 100 (441)
++...|..++
T Consensus 13 ~i~~kl~~i~ 22 (89)
T d1vcsa1 13 EITSKIARVP 22 (89)
T ss_dssp HHHHHHHHGG
T ss_pred HHHHHHHHHH
Confidence 3333444443
No 34
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB {Bordetella pertussis [TaxId: 520]}
Probab=23.13 E-value=71 Score=22.75 Aligned_cols=24 Identities=17% Similarity=0.302 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 013531 77 QKEKAIQDKSERIVSLQKELSSLQ 100 (441)
Q Consensus 77 ~ke~~i~ek~~~I~~l~~ei~sLq 100 (441)
++|.+|..++.-=-+|...|...+
T Consensus 14 ~LE~IV~~LE~g~l~Leesl~~ye 37 (68)
T d1vp7a_ 14 ELESLVSAMENGTLPLEQSLSAYR 37 (68)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHH
Confidence 344444444333333444444443
No 35
>d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=22.45 E-value=9.3 Score=29.54 Aligned_cols=12 Identities=42% Similarity=0.797 Sum_probs=9.8
Q ss_pred HhhhccCChhHH
Q 013531 201 EVHSAWLPPWLA 212 (441)
Q Consensus 201 e~h~~wlppw~a 212 (441)
|-|..++|+|||
T Consensus 1 E~~~G~~P~~lA 12 (113)
T d1nyra1 1 EETKGAFPTWLA 12 (113)
T ss_dssp HHHTTCCCTTTC
T ss_pred CCCCCCCCcccC
Confidence 457789999999
No 36
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=21.24 E-value=1.4e+02 Score=21.39 Aligned_cols=25 Identities=12% Similarity=0.252 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHHhhHHHHhhhhcc
Q 013531 46 ELDQLKSKIRSLESHIDEKTQELKG 70 (441)
Q Consensus 46 el~~l~~~i~~Les~i~~~~~~i~~ 70 (441)
++.++...+..|.+=|.+.+..+.+
T Consensus 3 ~~q~F~~~~~el~~Wl~e~e~~l~~ 27 (110)
T d1u5pa1 3 KQQNFNTGIKDFDFWLSEVEALLAS 27 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4556666777777777776666654
No 37
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.89 E-value=1.1e+02 Score=21.66 Aligned_cols=13 Identities=15% Similarity=0.411 Sum_probs=6.0
Q ss_pred HHHHHHHHHHhhH
Q 013531 49 QLKSKIRSLESHI 61 (441)
Q Consensus 49 ~l~~~i~~Les~i 61 (441)
.++..++.|.+-|
T Consensus 15 ~in~~f~~L~~ll 27 (79)
T d1nlwa_ 15 HLRLSLEKLKGLV 27 (79)
T ss_dssp HHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhC
Confidence 3444444444444
No 38
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.53 E-value=1.1e+02 Score=21.61 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 113 KAHARADELEKQIDNLKKESEKQQKEKEAL 142 (441)
Q Consensus 113 ~a~~~~~eLe~eVe~Lkkeie~~ek~~eeL 142 (441)
.|-.-+..|..++..+..+++.+..+...|
T Consensus 44 ~A~~yI~~L~~~~~~l~~~~~~L~~~~~~L 73 (79)
T d1nlwa_ 44 KAKLHIKKLEDSDRKAVHQIDQLQREQRHL 73 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555555555544444444443333
No 39
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.44 E-value=1.1e+02 Score=23.42 Aligned_cols=41 Identities=12% Similarity=0.221 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013531 124 QIDNLKKESEKQQKEKEALEARAIEAEKKISDLSAKLEKLQ 164 (441)
Q Consensus 124 eVe~Lkkeie~~ek~~eeLEark~eLEkkleELekklEeLe 164 (441)
+++.|+.+++++..+-..|+.....+..++.++....+...
T Consensus 2 r~~~L~~El~~L~~~E~~LD~li~~~~~~L~~lted~~n~k 42 (101)
T d2azeb1 2 RLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTDSQR 42 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhcc
Done!