BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013535
(441 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255543679|ref|XP_002512902.1| amino acid binding protein, putative [Ricinus communis]
gi|223547913|gb|EEF49405.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/443 (83%), Positives = 401/443 (90%), Gaps = 2/443 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN+ C DATVI+VDSVNKHGILLQV+QVL D+NLVIKKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDVCEDATVIQVDSVNKHGILLQVVQVLTDMNLVIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNVID DG KIRDKEVI YIQ+RLE++ASFAPSLR SVGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVIDQDGNKIRDKEVIGYIQRRLESNASFAPSLRGSVGVMPSEDHTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+G DRPGL SEVCAVLADL CNVVNAEIWTHN RAAAVVHVTD STG A+KDPKRLSTI
Sbjct: 121 LSGNDRPGLLSEVCAVLADLRCNVVNAEIWTHNARAAAVVHVTDDSTGCAVKDPKRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK-AVGRVEDKSSR 239
KELL NVL+G +D + AK +LSPPGI +RERRLHQIMF DRDYERV++ +GR+EDKSSR
Sbjct: 181 KELLCNVLKGNNDLKAAKMTLSPPGITSRERRLHQIMFADRDYERVDRVGLGRLEDKSSR 240
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIR 298
P VTVLNIEKDY+VITMRSKDRPKLLFDIVCTLTDM+YVVFHGMVN GR EAYQEFYIR
Sbjct: 241 PHVTVLNIEKDYSVITMRSKDRPKLLFDIVCTLTDMEYVVFHGMVNAGRKEEAYQEFYIR 300
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
HVDGLPISS+AERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITR FRENSL IK
Sbjct: 301 HVDGLPISSDAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRTFRENSLCIK 360
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 418
RAEIST GG KDTFYVTDVTG+PVDPKI+DSI RQIG T+LQVK++ L+PKP +ETT
Sbjct: 361 RAEISTKGGIAKDTFYVTDVTGSPVDPKIVDSICRQIGQTRLQVKQNLTLSPKPAQETTM 420
Query: 419 GFFLGNFFKARTFQTFKLIRSYS 441
G+ LG FKARTFQ FKLIRSYS
Sbjct: 421 GYLLGTLFKARTFQNFKLIRSYS 443
>gi|224143611|ref|XP_002336061.1| predicted protein [Populus trichocarpa]
gi|222869846|gb|EEF06977.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/442 (83%), Positives = 403/442 (91%), Gaps = 4/442 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EYAKLIRR+NPPRVVIDN+ C +ATVI+VDSVNKHGILL+V+QVL D+NLVI KAYI
Sbjct: 1 MDEEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVFNV+D DGKKIRDKEV+DYIQ+RLE++ASFAPSLR SVGVMP+EEHT+IE
Sbjct: 61 SSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTD STG AIKDPKRLSTI
Sbjct: 121 LTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSR 239
+ELL NVL+G DD + A T+LSPPG+ +RERRLHQIMF DRDYERVE+A + R EDKSSR
Sbjct: 181 RELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSR 240
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
P VTVLNIE+DYTV++MRSKDRPKLLFDIVCTLTDM+YVVFHGMV+TGR EAYQEFYIRH
Sbjct: 241 PHVTVLNIERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRH 300
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
VDGLP+SS+AERERV+QCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL IKR
Sbjct: 301 VDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKR 360
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AEI T GGK KDTFYVTDVTGNPVDPKIIDSI RQIG TKL VKR++IL+PKPP+ETT G
Sbjct: 361 AEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETTMG 420
Query: 420 FFLGNFFKARTFQTFKLIRSYS 441
+ GN FKAR TFKLIRSYS
Sbjct: 421 YIFGNLFKAR---TFKLIRSYS 439
>gi|224055763|ref|XP_002298641.1| predicted protein [Populus trichocarpa]
gi|222845899|gb|EEE83446.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/444 (82%), Positives = 403/444 (90%), Gaps = 6/444 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EYAKLIRR+NPPRVVIDN+ C +ATVI+VDSVNKHGILL+V+QVL D+NLVI KAYI
Sbjct: 1 MDEEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ--RLETDASFAPSLRSSVGVMPTEEHTS 118
SSDG WFMDVFNV+D DGKKIRDKEV+DYIQ+ RLE++ASFAPSLR SVGVMP+EEHT+
Sbjct: 61 SSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRVRRLESNASFAPSLRGSVGVMPSEEHTA 120
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE TGTDRPGL SEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTD STG AIKDPKRLS
Sbjct: 121 IELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLS 180
Query: 179 TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKS 237
TI+ELL NVL+G DD + A T+LSPPG+ +RERRLHQIMF DRDYERVE+A + R EDKS
Sbjct: 181 TIRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKS 240
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
SRP VTVLNIE+DYTV++MRSKDRPKLLFDIVCTLTDM+YVVFHGMV+TGR EAYQEFYI
Sbjct: 241 SRPHVTVLNIERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYI 300
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 357
RHVDGLP+SS+AERERV+QCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL I
Sbjct: 301 RHVDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCI 360
Query: 358 KRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT 417
KRAEI T GGK KDTFYVTDVTGNPVDPKIIDSI RQIG TKL VKR++IL+PKPP+ETT
Sbjct: 361 KRAEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETT 420
Query: 418 TGFFLGNFFKARTFQTFKLIRSYS 441
G+ GN FKAR TFKLIRSYS
Sbjct: 421 MGYIFGNLFKAR---TFKLIRSYS 441
>gi|356561659|ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
Length = 445
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/445 (78%), Positives = 392/445 (88%), Gaps = 4/445 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSD WFMDVFNVID +G KIRDKEVIDYIQ+RLE + SFAPSLR SVGV+PTEEHT IE
Sbjct: 61 SSDAVWFMDVFNVIDHNGNKIRDKEVIDYIQRRLENNPSFAPSLRESVGVVPTEEHTVIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SE+CAVL DLHCNVV AEIWTHN RAAAVVHVTD S+G AIKDP RLSTI
Sbjct: 121 LTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSR 239
++LL NVLRG +D + A+T+LSPPG+ NR+RRLHQIMF DRDYER+E+A G + D+ R
Sbjct: 181 RDLLSNVLRGSNDPKTARTTLSPPGVTNRDRRLHQIMFADRDYERIERAGRGGLRDRDKR 240
Query: 240 --PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P VTV++ +EKDYTV+TMR++DRPKLLFDIVCTLTDMQYVVFHG+V T RTEA+QEFY
Sbjct: 241 PLPHVTVVDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAFQEFY 300
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
IRHVDG PISSEAERER++QCLEAAIERRASEG+ELELCTEDRVGLLSDITRIFRENSL
Sbjct: 301 IRHVDGFPISSEAERERLVQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLC 360
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 416
IKRAEIST GK +DTFYVTDVTGNPVDPKIIDSIRRQIG L+VK ++ L+PKP + T
Sbjct: 361 IKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPSQPT 420
Query: 417 TTGFFLGNFFKARTFQTFKLIRSYS 441
T GF LGNFFKAR+FQ FKLIRSYS
Sbjct: 421 TIGFLLGNFFKARSFQNFKLIRSYS 445
>gi|225451503|ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248040 [Vitis vinifera]
gi|296082319|emb|CBI21324.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/443 (79%), Positives = 389/443 (87%), Gaps = 5/443 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN+ +ATVI+VDSVNKHGILL+V+QVL D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDASEEATVIQVDSVNKHGILLEVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV+D DG KIRDK VI+YI + LE DASF P +R +VGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVVDGDGNKIRDKGVINYITKTLERDASFVPPMRGTVGVMPSEDHTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+GTDRPGL SEVCAVLADLHCNVVNAEIWTHN RAAAVVHVTD STG AI+DP RLS I
Sbjct: 121 LSGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSTGCAIEDPNRLSKI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSR 239
KELL NVL+G +D + AK +LSPPG +RERRLHQIMF DRDY+RVE+A +G+ DKSSR
Sbjct: 181 KELLCNVLKGNNDLKTAKMTLSPPGFTHRERRLHQIMFADRDYQRVERAELGK--DKSSR 238
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VTVL+ IEKDYTVITMRSKDRPKLLFD VCTLTDMQYVVFHG+V+TGR EAYQE+YIR
Sbjct: 239 PHVTVLDCIEKDYTVITMRSKDRPKLLFDTVCTLTDMQYVVFHGVVHTGRMEAYQEYYIR 298
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
HVDGLP+SS+AERERVI+CLEAAIERRASEGLELEL TEDR GLLSDITR+FRENSL IK
Sbjct: 299 HVDGLPMSSDAERERVIECLEAAIERRASEGLELELRTEDRFGLLSDITRVFRENSLCIK 358
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 418
RAEIST GGK KDTFYVTDVTGNPV+P+IIDSIR+QIGH+ LQVK S L+PK P+ETT
Sbjct: 359 RAEISTEGGKAKDTFYVTDVTGNPVNPQIIDSIRQQIGHSILQVKNSN-LSPKAPQETTM 417
Query: 419 GFFLGNFFKARTFQTFKLIRSYS 441
F GN FK RT Q FKLIRSYS
Sbjct: 418 SFLFGNIFKCRTLQNFKLIRSYS 440
>gi|357503685|ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497146|gb|AES78349.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 442
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/442 (78%), Positives = 383/442 (86%), Gaps = 1/442 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVIKKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVFNV D +G KI+DKEVIDYIQ+RLE + SF S+R SVGV+PTEEHT IE
Sbjct: 61 SSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRRLEKNPSFETSMRESVGVVPTEEHTVIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SE+CAVLADL CNVV AEIWTHN RAAAVVHVTD S+G AI+DP RLSTI
Sbjct: 121 LTGTDRPGLLSEICAVLADLRCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
++LL NVLRG DD + AKT+LS PG+ R+RRLHQIMF DRDYERVE+A R DK P
Sbjct: 181 RDLLCNVLRGSDDPKTAKTALSHPGVTYRDRRLHQIMFADRDYERVERAGLRERDKGPFP 240
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + E+DYTV+ MR+KDRPKLLFDIVCTLTDMQYVVFHG+V T RT AYQEFYIRH
Sbjct: 241 HVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIRH 300
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
VDG PISSEAERER+IQCLEAAIERRASEG+ELELCTEDRVGLLSDITRIFRENSL IKR
Sbjct: 301 VDGFPISSEAERERLIQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKR 360
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AEIST GK KDTFYVTDVTGNPVDPK IDSIRRQIG T LQVK ++ L+PKPP+ TT G
Sbjct: 361 AEISTENGKAKDTFYVTDVTGNPVDPKSIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIG 420
Query: 420 FFLGNFFKARTFQTFKLIRSYS 441
F G+FFKAR+FQ FKLIRSYS
Sbjct: 421 FLFGSFFKARSFQNFKLIRSYS 442
>gi|356571573|ref|XP_003553951.1| PREDICTED: uncharacterized protein LOC100801859 [Glycine max]
Length = 445
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/446 (77%), Positives = 387/446 (86%), Gaps = 6/446 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVFNVID G KIRDKEVIDYIQ+RLE + SF PSLR SVGV+PTEEHT IE
Sbjct: 61 SSDGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SE+CAVL DLHCNVV AEIWTHN RAAAVVHVTD S+G AIKDP RLSTI
Sbjct: 121 LTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE----DK 236
++LL NVLRG +D + A+T+LSP G+ NR+RRLHQIMF DRDYER+E+A G+ E DK
Sbjct: 181 RDLLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERA-GQEELRDRDK 239
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P VTV + +EKDYTV+TMR++DRPKLLFDIVCTLTDMQYVVFHG+V T R EA+QEF
Sbjct: 240 RPLPHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEF 299
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
YIRHVDG PISSEAERER++QCLEAAIERRASEG+ LELCTEDRVGLLSDITR FRENSL
Sbjct: 300 YIRHVDGFPISSEAERERLMQCLEAAIERRASEGMGLELCTEDRVGLLSDITRTFRENSL 359
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
IKRAEIST GK +DTFYVTDVTGNPVDPKIIDSIRRQIG L+VK ++ L+PKPP+
Sbjct: 360 CIKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPPQP 419
Query: 416 TTTGFFLGNFFKARTFQTFKLIRSYS 441
TT GF LGNFFKAR+FQ FKLI+SYS
Sbjct: 420 TTIGFLLGNFFKARSFQNFKLIKSYS 445
>gi|357503687|ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497147|gb|AES78350.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 475
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/475 (73%), Positives = 383/475 (80%), Gaps = 34/475 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVIKKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ---------------------------- 92
SSDG WFMDVFNV D +G KI+DKEVIDYIQ+
Sbjct: 61 SSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRVGSCLFAISRMLQLTLIYVARSLWKGDF 120
Query: 93 -----RLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
RLE + SF S+R SVGV+PTEEHT IE TGTDRPGL SE+CAVLADL CNVV A
Sbjct: 121 TVLYHRLEKNPSFETSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLRCNVVTA 180
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
EIWTHN RAAAVVHVTD S+G AI+DP RLSTI++LL NVLRG DD + AKT+LS PG+
Sbjct: 181 EIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNVLRGSDDPKTAKTALSHPGVT 240
Query: 208 NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLF 266
R+RRLHQIMF DRDYERVE+A R DK P VTV + E+DYTV+ MR+KDRPKLLF
Sbjct: 241 YRDRRLHQIMFADRDYERVERAGLRERDKGPFPHVTVSDCTERDYTVVIMRAKDRPKLLF 300
Query: 267 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
DIVCTLTDMQYVVFHG+V T RT AYQEFYIRHVDG PISSEAERER+IQCLEAAIERRA
Sbjct: 301 DIVCTLTDMQYVVFHGVVQTERTGAYQEFYIRHVDGFPISSEAERERLIQCLEAAIERRA 360
Query: 327 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
SEG+ELELCTEDRVGLLSDITRIFRENSL IKRAEIST GK KDTFYVTDVTGNPVDPK
Sbjct: 361 SEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGNPVDPK 420
Query: 387 IIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
IDSIRRQIG T LQVK ++ L+PKPP+ TT GF G+FFKAR+FQ FKLIRSYS
Sbjct: 421 SIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIGFLFGSFFKARSFQNFKLIRSYS 475
>gi|449490057|ref|XP_004158495.1| PREDICTED: uncharacterized protein LOC101225681 [Cucumis sativus]
Length = 440
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/442 (73%), Positives = 375/442 (84%), Gaps = 3/442 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRR+NPPRVVIDNN C DATVI+VDS+NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 1 MDNEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNVI +G KIRD+EVI+ IQ RLE ASF PSLR SVGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIE 118
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+GTDRPGL SEVCAVLADLHCNVVNA++WTHN+RAAAVVHVTD +TG AI DP+RL TI
Sbjct: 119 LSGTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTI 178
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVLRG + ++AK +LSPPG+ + +RRLHQIM DRDYER K VEDK+ RP
Sbjct: 179 KELLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRP 238
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + EKDYT+IT R++DRPKLLFD++CTLTDM+YVVFHGMV TGR EA+ EFYIRH
Sbjct: 239 HVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEAFLEFYIRH 298
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
DGLPISS+AER+RV+ CLEAAIERR SEGL+LELC EDRVGLLSDITRIFRENSL I+R
Sbjct: 299 KDGLPISSKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENSLCIRR 358
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AEI+T GK KD FYVTD+TG +D K+++SIR+QIG LQVK ++ L+ PPKE T G
Sbjct: 359 AEIATKRGKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCLSETPPKEMTAG 418
Query: 420 FFLGNFFKARTFQTFKLIRSYS 441
FFLG FFKARTFQ FKLIRSYS
Sbjct: 419 FFLGYFFKARTFQNFKLIRSYS 440
>gi|449441712|ref|XP_004138626.1| PREDICTED: uncharacterized protein LOC101213097 [Cucumis sativus]
Length = 445
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/447 (72%), Positives = 376/447 (84%), Gaps = 8/447 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRR+NPPRVVIDNN C DATVI+VDS+NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 1 MDNEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNVI +G KIRD+EVI+ IQ RLE ASF PSLR SVGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIE 118
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+GTDRPGL SEVCAVLADLHCNVVNA++WTHN+RAAAVVHVTD +TG AI DP+RL TI
Sbjct: 119 LSGTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTI 178
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVLRG + ++AK +LSPPG+ + +RRLHQIM DRDYER K VEDK+ RP
Sbjct: 179 KELLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRP 238
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-----AYQE 294
VTV + EKDYT+IT R++DRPKLLFD++CTLTDM+YVVFHGMV TGR E ++QE
Sbjct: 239 HVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEENWSFSFQE 298
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
FYIRH DGLPISS+AER+RV+ CLEAAIERR SEGL+LELC EDRVGLLSDITRIFRENS
Sbjct: 299 FYIRHKDGLPISSKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENS 358
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 414
L I+RAEI+T GK KD FYVTD+TG +D K+++SIR+QIG LQVK ++ L+ PPK
Sbjct: 359 LCIRRAEIATKRGKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCLSETPPK 418
Query: 415 ETTTGFFLGNFFKARTFQTFKLIRSYS 441
E T GFFLG FFKARTFQ FKLIRSYS
Sbjct: 419 EMTAGFFLGYFFKARTFQNFKLIRSYS 445
>gi|297832736|ref|XP_002884250.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
gi|297330090|gb|EFH60509.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
Length = 442
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/445 (73%), Positives = 369/445 (82%), Gaps = 10/445 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKLIRRMNPPRVVIDNN DATVI+VDSVNKHG LL+V+QVL D+NLVIKKAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS-FAPSLRSSVGVMPTEEHTSIE 120
SDGGWFMDVF VID DG KIRD +V+DYIQ+R+E++A F P LRSSVGVMPT+E+T+IE
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQRRIESNAGWFIPPLRSSVGVMPTDEYTAIE 122
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV+HVTD+ T AI DP RLSTI
Sbjct: 123 LAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNLTNSAITDPIRLSTI 182
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NV+R R AKT S +RERRLHQIMFDDRDYE V++A + +SRP
Sbjct: 183 KELLCNVVRTNSGSRAAKTVFSCSD-THRERRLHQIMFDDRDYEGVKRA----KTSASRP 237
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VT++NIEKDYTV+TMRSKDRPKL+FD+VCTLTDMQYVVFHGMV+T EAYQEFYIRHV
Sbjct: 238 SVTLMNIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHV 297
Query: 301 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 360
DGLPI+SEAE+ERVIQCLEAAIERRASEGLELEL EDRVGLLSDITR FRENSL+I RA
Sbjct: 298 DGLPINSEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRA 357
Query: 361 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR----STILAPKPPKET 416
EIST GK KDTFYVTDVTGNPV+ KI++SIR+QIG +KL+VK+ S + +P ET
Sbjct: 358 EISTREGKAKDTFYVTDVTGNPVESKIVESIRQQIGVSKLKVKKKEDCSVLGTSRPSHET 417
Query: 417 TTGFFLGNFFKARTFQTFKLIRSYS 441
T G+ L N FK ++ Q+FKL S+S
Sbjct: 418 TMGYLLSNIFKPKSLQSFKLHLSHS 442
>gi|225456388|ref|XP_002280377.1| PREDICTED: uncharacterized protein LOC100256112 [Vitis vinifera]
gi|297734456|emb|CBI15703.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 308/444 (69%), Positives = 362/444 (81%), Gaps = 7/444 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN++C ATVI+VDS N+HGILLQV+QVL D+NL+I KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+RD+E+++Y+Q+ LET+A F SLR SVGVMP++E TSIE
Sbjct: 61 SSDGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL DL CNVVNAEIWTHN RAAAV+HVTD +TG AI+DPKRLS I
Sbjct: 121 LTGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNARAAAVIHVTDQATGCAIEDPKRLSMI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
K+ L NV +G FR K ++S PG MNR+RRLHQ+MF RD+ER+E V+DK+S
Sbjct: 181 KKRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEY----VQDKNS 236
Query: 239 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
RP VTVL+ ++DYTV+T+RS+DRPKLLFD VC LTDMQYVVFHG V TGR EAYQE YI
Sbjct: 237 RPHVTVLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYI 296
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 357
RHVDGLP+ SEAER+RV +CLEAAIERRA EGL LEL TEDR GLLSD+TR+FREN L I
Sbjct: 297 RHVDGLPLRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCI 356
Query: 358 KRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT 417
KRA I+T GK KDTF+VTDV+GN VD K ++ IR+QIG T L+VK + +PK P+E T
Sbjct: 357 KRAVITTKCGKAKDTFFVTDVSGNTVDSKTVEMIRQQIGQTILRVKGNLNFSPKLPQEGT 416
Query: 418 TGFFLGNFFKARTFQTFKLIRSYS 441
F GN FK R+FQTFKLI+SYS
Sbjct: 417 RSFPFGNLFKGRSFQTFKLIKSYS 440
>gi|147858899|emb|CAN80840.1| hypothetical protein VITISV_043834 [Vitis vinifera]
Length = 440
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 307/444 (69%), Positives = 360/444 (81%), Gaps = 7/444 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN++C ATVI+VDS N+HGILLQV+QVL D+NL+I KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+RD+E+++Y+Q+ LET+A F SLR SVGVMP++E TSIE
Sbjct: 61 SSDGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL DL CNVVNAEIWTHN RAAAV+HVTD +TG AI+DPKRLS I
Sbjct: 121 LTGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNXRAAAVIHVTDQATGCAIEDPKRLSMI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
K+ L NV +G FR K ++S PG MNR+RRLHQ+MF RD+ER+E A +D +S
Sbjct: 181 KKRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYA----QDTNS 236
Query: 239 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
RP VTVL+ ++DYTV+T+RS+DRPKLLFD VC LTDMQYVVFHG V TGR EAYQE YI
Sbjct: 237 RPHVTVLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYI 296
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 357
RHVDGLP+ SEAER+RV +CLEAAIERRA EGL LEL TEDR GLLSD+TR+FREN L I
Sbjct: 297 RHVDGLPLRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCI 356
Query: 358 KRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT 417
KRA I+T GK KDTF+VTDV+GN VD K ++ IR+QIG T L+VK + +PK P E T
Sbjct: 357 KRAVITTKCGKAKDTFFVTDVSGNXVDSKTVEMIRQQIGQTILRVKGNLNFSPKLPXEGT 416
Query: 418 TGFFLGNFFKARTFQTFKLIRSYS 441
F GN FK R+FQTFKLI+SYS
Sbjct: 417 RSFXFGNLFKGRSFQTFKLIKSYS 440
>gi|15232835|ref|NP_186848.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
gi|6513932|gb|AAF14836.1|AC011664_18 unknown protein [Arabidopsis thaliana]
gi|22138102|gb|AAM93431.1| ACR6 [Arabidopsis thaliana]
gi|26451489|dbj|BAC42843.1| unknown protein [Arabidopsis thaliana]
gi|28973303|gb|AAO63976.1| unknown protein [Arabidopsis thaliana]
gi|332640226|gb|AEE73747.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
Length = 433
Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust.
Identities = 322/436 (73%), Positives = 361/436 (82%), Gaps = 13/436 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKLIRRMNPPRVVIDNN DATVI+VDSVNKHG LL+V+QVL D+NLVIKKAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS-FAPSLRSSVGVMPTEEHTSIE 120
SDGGWFMDVF VID DG KIRD +V+DYIQ+R+E++A F P LRSSVGVMPT+E+TSIE
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQKRIESNAGWFIPPLRSSVGVMPTDEYTSIE 122
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV+HVTD+ST AI DP RLSTI
Sbjct: 123 LAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPIRLSTI 182
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NV+R R AKT S +RERRLHQIMFDDRDYE V++A +SRP
Sbjct: 183 KELLCNVVRTNSGSRAAKTVFSCSD-THRERRLHQIMFDDRDYEGVKRA----RTSASRP 237
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VT++NIEKDYTV+TMRSKDRPKL+FD+VCTLTDMQYVVFHGMV+T EAYQEFYIRHV
Sbjct: 238 SVTLMNIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHV 297
Query: 301 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 360
DGLPI+SEAE+ERVIQCLEAAIERRASEGLELEL EDRVGLLSDITR FRENSL+I RA
Sbjct: 298 DGLPINSEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRA 357
Query: 361 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR------STILAPKPPK 414
EIST GK KDTFYVTDVTGNPV+ KI++SIR+QIG +KL+VK+ S + +P
Sbjct: 358 EISTREGKAKDTFYVTDVTGNPVESKIVESIRQQIGVSKLKVKKKEKEHCSVLGTSRPSH 417
Query: 415 ETTT-GFFLGNFFKAR 429
ETTT G+ L N FK +
Sbjct: 418 ETTTMGYLLSNIFKPK 433
>gi|6091737|gb|AAF03449.1|AC010797_25 unknown protein [Arabidopsis thaliana]
Length = 462
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 323/465 (69%), Positives = 361/465 (77%), Gaps = 42/465 (9%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKLIRRMNPPRVVIDNN DATVI+VDSVNKHG LL+V+QVL D+NLVIKKAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ-----------------------------Q 92
SDGGWFMDVF VID DG KIRD +V+DYIQ Q
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQ 122
Query: 93 RLETDAS-FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
R+E++A F P LRSSVGVMPT+E+TSIE GTDRPGL SEV AVL DLHCNVVNAEIWT
Sbjct: 123 RIESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWT 182
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
HN RAAAV+HVTD+ST AI DP RLSTIKELL NV+R R AKT S +RER
Sbjct: 183 HNTRAAAVIHVTDNSTHSAITDPIRLSTIKELLCNVVRTNSGSRAAKTVFSCSD-THRER 241
Query: 212 RLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCT 271
RLHQIMFDDRDYE V++A +SRP VT++NIEKDYTV+TMRSKDRPKL+FD+VCT
Sbjct: 242 RLHQIMFDDRDYEGVKRA----RTSASRPSVTLMNIEKDYTVVTMRSKDRPKLVFDVVCT 297
Query: 272 LTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
LTDMQYVVFHGMV+T EAYQEFYIRHVDGLPI+SEAE+ERVIQCLEAAIERRASEGLE
Sbjct: 298 LTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPINSEAEQERVIQCLEAAIERRASEGLE 357
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
LEL EDRVGLLSDITR FRENSL+I RAEIST GK KDTFYVTDVTGNPV+ KI++SI
Sbjct: 358 LELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGKAKDTFYVTDVTGNPVESKIVESI 417
Query: 392 RRQIGHTKLQVKR------STILAPKPPKETTT-GFFLGNFFKAR 429
R+QIG +KL+VK+ S + +P ETTT G+ L N FK +
Sbjct: 418 RQQIGVSKLKVKKKEKEHCSVLGTSRPSHETTTMGYLLSNIFKPK 462
>gi|224108635|ref|XP_002314917.1| predicted protein [Populus trichocarpa]
gi|222863957|gb|EEF01088.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 278/442 (62%), Positives = 339/442 (76%), Gaps = 6/442 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RR+NPPRVVIDN C +ATVI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 7 MDDEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI + L ++ F S+RS VGV + +HT+IE
Sbjct: 67 SSDGGWFMDVFNVTDPDGNKVTDEAILDYITKSLGPESCFTSSMRS-VGVKQSMDHTAIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL L CNVVNAE+WTHN RAAAV+ VTD TG AI DP++LS I
Sbjct: 126 LTGSDRPGLLSEVSAVLTHLKCNVVNAEVWTHNMRAAAVMQVTDEETGSAIIDPEKLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL+G + R AKT +S G+ + ERRLHQ+MF DRDYER A D+ RP
Sbjct: 186 KELLCNVLKGSNKSRGAKTVVSH-GVTHTERRLHQMMFADRDYER---ANNDELDEKQRP 241
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V+V+N EKDY+V+T+ SKDRPKLLFD VCTLTDM+YVVFH ++ EA+QE+YI+H
Sbjct: 242 NVSVVNWCEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKH 301
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG P+ SEAER+R+IQCLEAAIERR SEGL+LELCT DRVGLLSD+TRIFRENSL++ R
Sbjct: 302 IDGSPVKSEAERQRIIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTR 361
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T GK +TFYV+D +G PVD K IDSIR+ IG T L+VK S +E+ T
Sbjct: 362 AEVTTRAGKAVNTFYVSDASGYPVDAKTIDSIRQAIGQTILKVKSSPEEQKPVSQESPTR 421
Query: 420 FFLGNFFKARTFQTFKLIRSYS 441
F G FK+R+F F L+RSYS
Sbjct: 422 FLFGGLFKSRSFVNFGLVRSYS 443
>gi|255541934|ref|XP_002512031.1| amino acid binding protein, putative [Ricinus communis]
gi|223549211|gb|EEF50700.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 280/442 (63%), Positives = 343/442 (77%), Gaps = 6/442 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RR+NPPRVVIDN +C +ATVI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 7 MDDEYEKLFRRLNPPRVVIDNESCKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG KI D+ ++DYI++ L ++ F S+RS VGV+P+ +HTSIE
Sbjct: 67 SSDGGWFMDVFNVRDQDGNKITDEAILDYIRKSLGPESRFTSSMRS-VGVIPSMDHTSIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SE+ AVL L CNVV+AE+WTHN RAAAV+ VTD TG AI DP+RLS I
Sbjct: 126 LTGSDRPGLLSELSAVLTHLKCNVVSAEVWTHNMRAAAVMQVTDEETGSAIIDPERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL+G + FR AKT +S G+ + ERRLHQ+MF DRDYER + V D+ RP
Sbjct: 186 KELLCNVLKGSNKFRGAKTVVSH-GVTHTERRLHQMMFADRDYERADD---EVLDEKQRP 241
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V+V+N +KDY+V+T+RSKDRPKLLFD VCTLTDM+YVVFH ++ EAYQE+YIRH
Sbjct: 242 NVSVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIRH 301
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG P+ S+AER RVIQCLEAAIERR SEGL+LELCT DRVGLLSD+TRIFRENSL++ R
Sbjct: 302 IDGSPVKSDAERMRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTR 361
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T GK +TFYV D +G VD K I+SIR+ IG T L+VK + +E+ T
Sbjct: 362 AEVTTRDGKAINTFYVRDASGYLVDGKTIESIRQVIGQTILKVKSNPDELKPVSQESPTR 421
Query: 420 FFLGNFFKARTFQTFKLIRSYS 441
F G FK+R+F F L+RSYS
Sbjct: 422 FLFGGLFKSRSFVNFGLVRSYS 443
>gi|224101597|ref|XP_002312346.1| predicted protein [Populus trichocarpa]
gi|222852166|gb|EEE89713.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/442 (61%), Positives = 341/442 (77%), Gaps = 6/442 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDEY KL RR+NPPRVVIDN C +ATVI+VDS NKHG LL+V+QVL D+NL+I KAY+
Sbjct: 7 LDDEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGKLLEVVQVLTDLNLIITKAYV 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI + L T++ F S+ S GV + +HT+IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEAILDYITKSLGTESCFTSSM-GSFGVKQSIDHTAIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVLA L CNV+NAE+WTHN RAAAV+ VTD TG AI DP++LS +
Sbjct: 126 LTGSDRPGLLSEVSAVLAHLKCNVLNAEVWTHNMRAAAVMQVTDDETGSAITDPEKLSRV 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL+G + +R A+T +S G+ + ERRLHQ+MF DRDYER A V D+ RP
Sbjct: 186 KELLCNVLKGSNKYRGARTVVSH-GVTHTERRLHQMMFADRDYER---ANNDVLDEKQRP 241
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V+V+N EKDY+VIT+RSKDRPKLLFD VCTLTDM+YVVFH ++ EA+QE+YI+H
Sbjct: 242 NVSVVNWYEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKH 301
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
VDG P+ SEAER+R+IQCLEAAIERR SEGL+LELCT+DR+GLLSD+TRIFRENSL++ R
Sbjct: 302 VDGSPVKSEAERQRIIQCLEAAIERRVSEGLKLELCTKDRIGLLSDVTRIFRENSLTVTR 361
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T GK +TFYV+D +G PVD K IDSIR+ G T L+VK S +E+ T
Sbjct: 362 AEVTTRAGKAVNTFYVSDASGYPVDAKTIDSIRQATGQTILKVKGSPEELKPVSQESPTR 421
Query: 420 FFLGNFFKARTFQTFKLIRSYS 441
F G FK+R+F F L++SYS
Sbjct: 422 FLFGGLFKSRSFVNFGLVKSYS 443
>gi|255540149|ref|XP_002511139.1| amino acid binding protein, putative [Ricinus communis]
gi|223550254|gb|EEF51741.1| amino acid binding protein, putative [Ricinus communis]
Length = 452
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 279/451 (61%), Positives = 337/451 (74%), Gaps = 16/451 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKLIRRMN PRVVIDN+ C AT+++VD++N++G LLQV+QVL D+NL+I KAYISS
Sbjct: 6 DEYAKLIRRMNSPRVVIDNDACEHATIVQVDTLNRYGTLLQVVQVLTDLNLIITKAYISS 65
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF V DG K+ D+ +++YI++ LE D S+RSS+ ++P++EHTSIE +
Sbjct: 66 DGVWFMDVFYVTGNDGNKVEDESILNYIKKALERDGHVVNSIRSSIAMLPSKEHTSIELS 125
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDRPGL SEV AVL DL C+VVNAEIWTHN R AA++H+T+ STG A+++PKRLS IKE
Sbjct: 126 GTDRPGLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCAVEEPKRLSLIKE 185
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
LL NVL+G FR K S+S P + RRLHQ+MF RD+ER+E A ++K P V
Sbjct: 186 LLRNVLKGNSTFRSPKVSISSPEETHIGRRLHQMMFAARDFERLESA----KEKGVEPCV 241
Query: 243 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
V + +KDYTV+T+R DRPKLLFD V LTDMQYVVFHG V TG EAYQE+YIRHVD
Sbjct: 242 IVSDCADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAYQEYYIRHVD 301
Query: 302 GLPISSEAERERVIQCLEAAIERRASE-----------GLELELCTEDRVGLLSDITRIF 350
GLPISSEAER+RV +CLEAAIERRASE GLELELCT+DR GLLSDITRIF
Sbjct: 302 GLPISSEAERQRVTECLEAAIERRASERYTHRNVTLSQGLELELCTDDRFGLLSDITRIF 361
Query: 351 RENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP 410
REN LSI+RAEIST GK KDTF+VTDV GN VDP + IR QIG T L K +
Sbjct: 362 RENGLSIQRAEISTKNGKAKDTFFVTDVAGNSVDPTTVRMIREQIGQTILHAKGKLNVLS 421
Query: 411 KPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
K P+ET F G+FFK R+F F L++SYS
Sbjct: 422 KFPQETPRSFLFGSFFKGRSFHHFGLVKSYS 452
>gi|147858719|emb|CAN83103.1| hypothetical protein VITISV_015490 [Vitis vinifera]
Length = 416
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/430 (64%), Positives = 332/430 (77%), Gaps = 15/430 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN TC +A+VI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 1 MDDEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG KI D+E++DYIQ+ L +DA F S+R SVGV+P+ +HTSIE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL L C+VVNAE+WTHN RAAAV+HVTD TG AI DP+RLS +
Sbjct: 121 LTGSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKV 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL N LR + S G+ + ERRLHQ+MF DRDYER+ D++ RP
Sbjct: 181 KQLLCN-LRLW----------SLHGVTHTERRLHQMMFADRDYERI---YNDGSDEAQRP 226
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T+RSKDRPKLLFD VCTLTDMQYVVFH V+ EAYQE+YIRH
Sbjct: 227 NVNVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRH 286
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG P+ S+AER+RVIQCLEAAIERR SEGL+LELCT DRVGLLSD+TRIFRENSLS+ R
Sbjct: 287 IDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTR 346
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T GK +TF+V D +G PVD K IDSIR IG T LQVK S + P+E+ T
Sbjct: 347 AEVTTRAGKAVNTFHVRDASGYPVDAKTIDSIREAIGQTILQVKGSPEEIKQIPQESPTR 406
Query: 420 FFLGNFFKAR 429
F L F++R
Sbjct: 407 FLLVGLFRSR 416
>gi|312281803|dbj|BAJ33767.1| unnamed protein product [Thellungiella halophila]
Length = 451
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/447 (61%), Positives = 348/447 (77%), Gaps = 8/447 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDEY KLIRRMNPPRVVIDN++C +ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 7 VDDEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R+ VGV+P+ + T IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSSSMRT-VGVIPSTDSTVIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG AI DP+RLS I
Sbjct: 126 LTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE RV ++D+ R
Sbjct: 186 KNLLRNVLKGSNTPREAKTVVSQ-GEVHTDRRLHQMMFEDRDYEHRVVDDDSSIQDERQR 244
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEAYQE+Y+R
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAYQEYYVR 304
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
H+DG P+ SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVT 364
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS----TILAPKPPK 414
RAE+ T GGK +TFYV+D +G +D K +DSIR+ IG T L+VK + P +
Sbjct: 365 RAEVKTKGGKALNTFYVSDASGYSIDAKTLDSIRQTIGQTILKVKNNPEEQQQRQKSPSQ 424
Query: 415 ETTTGFFLGNFFKARTFQTFKLIRSYS 441
E+ T F G FK+++F F L+RSYS
Sbjct: 425 ESPTRFLFGGLFKSKSFVNFGLVRSYS 451
>gi|297838675|ref|XP_002887219.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
gi|297333060|gb|EFH63478.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/447 (61%), Positives = 346/447 (77%), Gaps = 8/447 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 11 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG I DP+RLS I
Sbjct: 130 LTGCDRPGLLSELSAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCGISDPERLSRI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 190 KNLLRNVLKGSNTPREAKTVVSH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 248
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEAYQE+Y+R
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVR 308
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
H+DG P+ SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTSDRVGLLSNVTRIFRENSLTVT 368
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPK 414
RAE+ T GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + + P
Sbjct: 369 RAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSH 428
Query: 415 ETTTGFFLGNFFKARTFQTFKLIRSYS 441
E+ T F G FK+++F F L+RSYS
Sbjct: 429 ESPTRFLFGGLFKSKSFVNFGLVRSYS 455
>gi|195970393|gb|ACG60681.1| unknown protein [Brassica oleracea var. alboglabra]
Length = 446
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 277/450 (61%), Positives = 348/450 (77%), Gaps = 13/450 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN++C +ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 1 MDDEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ +R+ +GV P+ + T IE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTPMRT-IGVTPSTDSTVIE 119
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG AI DP+RLS I
Sbjct: 120 LTGCDRPGLLSELTAVLTHLRCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 179
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV----GRVEDK 236
K LL NVL+G + R+AKT LS G ++ +RRLHQ+MF+DRDYE +AV ++D+
Sbjct: 180 KNLLRNVLKGSNTPREAKTVLSH-GEVHTDRRLHQMMFEDRDYE--HRAVVDDDSSIQDE 236
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
RP V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEAYQE+
Sbjct: 237 RQRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEY 296
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
Y+RH+DG P+ SEAE++RVIQCLEAAI RR SEGL+LELCT DRVGLLS++TRIFRENSL
Sbjct: 297 YVRHIDGSPVKSEAEKQRVIQCLEAAINRRVSEGLKLELCTTDRVGLLSNVTRIFRENSL 356
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS---TILAPKP 412
++ RAE+ T GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + KP
Sbjct: 357 TVTRAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPEEQQQRQKP 416
Query: 413 P-KETTTGFFLGNFFKARTFQTFKLIRSYS 441
P +++ T F G FK+++F F L+RSYS
Sbjct: 417 PSQDSPTRFLFGGLFKSKSFVNFGLVRSYS 446
>gi|15221589|ref|NP_177067.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|22138098|gb|AAM93429.1| ACR4 [Arabidopsis thaliana]
gi|115646770|gb|ABJ17112.1| At1g69040 [Arabidopsis thaliana]
gi|332196757|gb|AEE34878.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 451
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/447 (61%), Positives = 345/447 (77%), Gaps = 8/447 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 7 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS I
Sbjct: 126 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 186 KNLLRNVLKGSNTPREAKTVVSH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 244
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+R
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 304
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
H+DG P+ SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVT 364
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPK 414
RAE+ T GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + + P
Sbjct: 365 RAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSH 424
Query: 415 ETTTGFFLGNFFKARTFQTFKLIRSYS 441
E+ T F G FK+++F F L+RSYS
Sbjct: 425 ESPTRFLFGGLFKSKSFVNFGLVRSYS 451
>gi|42572033|ref|NP_974107.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332196758|gb|AEE34879.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 455
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/447 (61%), Positives = 345/447 (77%), Gaps = 8/447 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 11 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS I
Sbjct: 130 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 190 KNLLRNVLKGSNTPREAKTVVSH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 248
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+R
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 308
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
H+DG P+ SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVT 368
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPK 414
RAE+ T GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + + P
Sbjct: 369 RAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSH 428
Query: 415 ETTTGFFLGNFFKARTFQTFKLIRSYS 441
E+ T F G FK+++F F L+RSYS
Sbjct: 429 ESPTRFLFGGLFKSKSFVNFGLVRSYS 455
>gi|6730631|gb|AAF27052.1|AC008262_1 F4N2.2 [Arabidopsis thaliana]
Length = 445
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/447 (61%), Positives = 345/447 (77%), Gaps = 8/447 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 1 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIE 119
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS I
Sbjct: 120 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 179
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 180 KNLLRNVLKGSNTPREAKTVVSH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 238
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+R
Sbjct: 239 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 298
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
H+DG P+ SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++
Sbjct: 299 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVT 358
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPK 414
RAE+ T GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + + P
Sbjct: 359 RAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSH 418
Query: 415 ETTTGFFLGNFFKARTFQTFKLIRSYS 441
E+ T F G FK+++F F L+RSYS
Sbjct: 419 ESPTRFLFGGLFKSKSFVNFGLVRSYS 445
>gi|449452827|ref|XP_004144160.1| PREDICTED: uncharacterized protein LOC101218703 [Cucumis sativus]
gi|449524655|ref|XP_004169337.1| PREDICTED: uncharacterized protein LOC101228960 [Cucumis sativus]
Length = 444
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 276/444 (62%), Positives = 337/444 (75%), Gaps = 11/444 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDEY KLIRRMNPPRVVIDN+ C DATVI+VDS NKHGILL+V+QVL D+NL++ KAYI
Sbjct: 7 IDDEYVKLIRRMNPPRVVIDNDACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
S DG WFMDVFNV D DG K+ D+ V+DYI++ LE+D+ FA S+RS VGV P+ ++T IE
Sbjct: 67 SCDGCWFMDVFNVTDQDGNKVTDEGVLDYIKRSLESDSCFASSMRS-VGVKPSVDYTVIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G DR GL SEV AVL L CNVV+AE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 126 LIGNDRQGLLSEVSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTDDETGSAITDLERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K LL NVLRG + K ++ G+ + ERRLHQ+MF DRDYE +++ V +ED+ +P
Sbjct: 186 KGLLSNVLRGSNSRSKGAKTVVSHGVTHIERRLHQMMFADRDYELLDEDV--MEDQQ-KP 242
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N + DY+V+T+RSKDRPKLLFD VCTLTDMQYVVFH V TEAYQE+YIRH
Sbjct: 243 NVKVVNWCDIDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAYQEYYIRH 302
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG P+ S+AER+RVI CLEAAI RR SEGL+LELCT DRVGLLSD+TRIFRENSL++ R
Sbjct: 303 IDGSPVKSDAERQRVIHCLEAAIRRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTR 362
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT-- 417
AE++T GK +TFYV D +G PVD K IDSIR IG T L+VK S+ +PK K+ +
Sbjct: 363 AEVTTKAGKAINTFYVRDPSGYPVDSKTIDSIRELIGQTILKVKGSS--SPKEQKQASQD 420
Query: 418 --TGFFLGNFFKARTFQTFKLIRS 439
T F G F++R+F F LIRS
Sbjct: 421 SPTRFLFGGLFRSRSFVNFGLIRS 444
>gi|356499934|ref|XP_003518790.1| PREDICTED: uncharacterized protein LOC100813551 isoform 1 [Glycine
max]
Length = 449
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/442 (60%), Positives = 332/442 (75%), Gaps = 5/442 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN C +ATVI+VDS NKHGILL+V+Q+L D+NL+I KAYI
Sbjct: 12 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV DG K+ D+ ++DYI++ L ++ +RS VGV T +HT+IE
Sbjct: 72 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRS-VGVKQTMDHTAIE 130
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL +L CN++NAE+WTHN RAAAV+HVTD TG AI DP+RLS I
Sbjct: 131 LMGTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSII 190
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + ERRLHQ+MF DRDYERV E + RP
Sbjct: 191 KELLCNVLGGGNKKRGAKTVVTDEAT-HTERRLHQMMFADRDYERVNDDDDFAEKQ--RP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T++ KDRPKLLFD VCTLTDMQYVVFH ++ EAYQE+YI+H
Sbjct: 248 NVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG P+ S+AER+RVIQCL AAIERR SEGL+LELCT DRVGLLSD+TRIFRENSL++ R
Sbjct: 308 IDGSPVKSDAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTR 367
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T GGK +TFYV +G PVD K I+SIR+ IG+T L+VK S P+++ T
Sbjct: 368 AEVATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPTR 427
Query: 420 FFLGNFFKARTFQTFKLIRSYS 441
FK+R+F F L++SYS
Sbjct: 428 SLFSGLFKSRSFVNFGLVKSYS 449
>gi|356495189|ref|XP_003516462.1| PREDICTED: uncharacterized protein LOC100787134 [Glycine max]
Length = 449
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/442 (60%), Positives = 331/442 (74%), Gaps = 5/442 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN C +ATVI+VDS NKHGILL+V+Q+L D+NL+I KAYI
Sbjct: 12 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV DG K+ D+ ++DYI++ L ++ +RS VGV T +H +IE
Sbjct: 72 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRS-VGVKQTTDHIAIE 130
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD +G AI DP+RLS I
Sbjct: 131 LMGTDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEESGSAITDPQRLSII 190
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + ERRLHQ+MF DRDYERV D+ RP
Sbjct: 191 KELLCNVLGGGNKKRGAKTVVTDEAT-HTERRLHQMMFADRDYERVNDDDDF--DEKQRP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T++ KDRPKLLFD VCTLTDMQYVVFH ++ EAYQE+YI+H
Sbjct: 248 NVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG P+ S+AER+RVIQCL AAI+RR SEGL+LELCT DRVGLLSD+TRIFRENSL++ R
Sbjct: 308 IDGSPVKSDAERQRVIQCLAAAIQRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTR 367
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T GGK +TFYV +G PVD K I+SIR+ IG+T L+VK S P+++ T
Sbjct: 368 AEVATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPTR 427
Query: 420 FFLGNFFKARTFQTFKLIRSYS 441
FK+R+F F L++SYS
Sbjct: 428 SLFSGLFKSRSFVNFGLVKSYS 449
>gi|224119390|ref|XP_002318060.1| predicted protein [Populus trichocarpa]
gi|222858733|gb|EEE96280.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/438 (60%), Positives = 335/438 (76%), Gaps = 8/438 (1%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMN PRVVI+N+ C ATVI++D+V + G LL+V+QVL D+NLVI KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDACEHATVIQLDTVYRQGTLLEVVQVLTDLNLVITKAYMSSDG 70
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
GWFM+VF+V D DG KIRD+ +++ I++ LETDA S+ ++ ++EHT IE TGT
Sbjct: 71 GWFMNVFHVTDDDGNKIRDEGILNCIKKALETDAYMVKSMGK---MLLSKEHTLIELTGT 127
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVL DL CNVVNAE+W HN RAAAV+H+TD STG AI+DP++LS IKELL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEVWAHNARAAAVIHITDQSTGTAIEDPRQLSLIKELL 187
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
+NVL+G D+R S+S PG ++ RRLHQ+MF RD+ER V+D RP VTV
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPVS----VDDIRVRPYVTV 243
Query: 245 LNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ +++YTV+T RS DRPKLLFD VCTLTDMQY+VFHG V T EAYQE+YIRH DGL
Sbjct: 244 SDCPDRNYTVVTARSVDRPKLLFDTVCTLTDMQYLVFHGTVITDSDEAYQEYYIRHADGL 303
Query: 304 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 363
P+SSEAER+RV++C++AAIERR SEGL+LEL T+D GLLSDITRI REN L KRA+IS
Sbjct: 304 PMSSEAERQRVMECIQAAIERRVSEGLQLELFTDDHFGLLSDITRILRENGLCPKRAKIS 363
Query: 364 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLG 423
T GK + F VTDV+GNPV+PK I IR+Q+G T +QVK + ++PK P+ET F G
Sbjct: 364 TKNGKARHNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVKGNLSMSPKFPQETPRSFLFG 423
Query: 424 NFFKARTFQTFKLIRSYS 441
+FFK +FQ +LI+S S
Sbjct: 424 SFFKCPSFQNSRLIKSLS 441
>gi|356499936|ref|XP_003518791.1| PREDICTED: uncharacterized protein LOC100813551 isoform 2 [Glycine
max]
Length = 433
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 267/445 (60%), Positives = 327/445 (73%), Gaps = 22/445 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN C +ATVI+VDS NKHGILL+V+Q+L D+NL+I KAYI
Sbjct: 7 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP---TEEHT 117
SSDGGWFMDVFNV DG K+ D+ ++DYI++ VGV P T +HT
Sbjct: 67 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRK---------------VGVSPFGQTMDHT 111
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IE GTDRPGL SEV AVL +L CN++NAE+WTHN RAAAV+HVTD TG AI DP+RL
Sbjct: 112 AIELMGTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRL 171
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
S IKELL NVL G + R AKT ++ + ERRLHQ+MF DRDYERV E +
Sbjct: 172 SIIKELLCNVLGGGNKKRGAKTVVTDEA-THTERRLHQMMFADRDYERVNDDDDFAEKQ- 229
Query: 238 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
RP V V+N +KDY+V+T++ KDRPKLLFD VCTLTDMQYVVFH ++ EAYQE+Y
Sbjct: 230 -RPNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYY 288
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
I+H+DG P+ S+AER+RVIQCL AAIERR SEGL+LELCT DRVGLLSD+TRIFRENSL+
Sbjct: 289 IKHIDGSPVKSDAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLT 348
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 416
+ RAE++T GGK +TFYV +G PVD K I+SIR+ IG+T L+VK S P+++
Sbjct: 349 VTRAEVATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDS 408
Query: 417 TTGFFLGNFFKARTFQTFKLIRSYS 441
T FK+R+F F L++SYS
Sbjct: 409 PTRSLFSGLFKSRSFVNFGLVKSYS 433
>gi|357487953|ref|XP_003614264.1| ACR4 [Medicago truncatula]
gi|355515599|gb|AES97222.1| ACR4 [Medicago truncatula]
Length = 451
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN +ATVI+VDS NK GILL+V+Q+L D+NL+I KAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI++ L ++ FA ++RS VGV T +HT+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRS-VGVKQTPDHTAIE 135
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G+DRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + +RRLHQ+MFDDRDYERV+ D+ RP
Sbjct: 196 KELLCNVLGGGNRKRGAKTVVTDDS-THTDRRLHQMMFDDRDYERVDDDDF---DEKQRP 251
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T+ +DRPKL+FD VCTLTDMQYVVFH ++ +AYQE+YI+H
Sbjct: 252 NVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKH 311
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG P+ S+AER+RVI CLEAAIERR SEGL+LELCT DRVGLLS++TRIFRENSL++ R
Sbjct: 312 IDGSPVKSDAERQRVIHCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTR 371
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T GGK +TFYV +G VD K I+SIR+ IG+T L+VK S P+ T +
Sbjct: 372 AEVTTKGGKAVNTFYVRGASGCIVDSKTIESIRQTIGNTILKVKGSPESLPQDSP-TRSS 430
Query: 420 FFLGNFFKARTFQTFKLIRSYS 441
F G FK+R+F F L++SYS
Sbjct: 431 IFSG-LFKSRSFVNFGLVKSYS 451
>gi|125544303|gb|EAY90442.1| hypothetical protein OsI_12028 [Oryza sativa Indica Group]
Length = 455
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 332/444 (74%), Gaps = 10/444 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I++MNPPRVVIDN +C +ATV+ VDS NK+GILL+V+QVL ++ L++KKAYIS
Sbjct: 16 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T
Sbjct: 76 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRETGLAISDTQRL 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+ IKE L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V +
Sbjct: 196 ARIKERLSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---N 251
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+Y
Sbjct: 252 PTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYY 311
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
IRH+DG P++SEAER+RVIQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L+
Sbjct: 312 IRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLT 371
Query: 357 IKRAEISTIGGKVKDTFYVTDVTG-NPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
+ RAE+ST G K +TFYV D G + VD K +++IR++IG T LQVK PP+E
Sbjct: 372 VTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQE 431
Query: 416 TTTGFFLGNFFKARTFQTFKLIRS 439
+ + F + F+ R+ + LIRS
Sbjct: 432 SPSRFLFSSLFRPRSLYSLGLIRS 455
>gi|115453517|ref|NP_001050359.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|41469089|gb|AAS07063.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708791|gb|ABF96586.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548830|dbj|BAF12273.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|125860400|dbj|BAF46923.1| ACT-domain repeat protein 7 [Oryza sativa Japonica Group]
gi|215693262|dbj|BAG88644.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 452
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 332/444 (74%), Gaps = 10/444 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I++MNPPRVVIDN +C +ATV+ VDS NK+GILL+V+QVL ++ L++KKAYIS
Sbjct: 13 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 72
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T
Sbjct: 73 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 132
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL
Sbjct: 133 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRL 192
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+ IKE L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V +
Sbjct: 193 ARIKERLSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---N 248
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+Y
Sbjct: 249 PTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYY 308
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
IRH+DG P++SEAER+RVIQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L+
Sbjct: 309 IRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLT 368
Query: 357 IKRAEISTIGGKVKDTFYVTDVTG-NPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
+ RAE+ST G K +TFYV D G + VD K +++IR++IG T LQVK PP+E
Sbjct: 369 VTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQE 428
Query: 416 TTTGFFLGNFFKARTFQTFKLIRS 439
+ + F + F+ R+ + LIRS
Sbjct: 429 SPSRFLFSSLFRPRSLYSLGLIRS 452
>gi|125586650|gb|EAZ27314.1| hypothetical protein OsJ_11253 [Oryza sativa Japonica Group]
Length = 455
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 332/444 (74%), Gaps = 10/444 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I++MNPPRVVIDN +C +ATV+ VDS NK+GILL+V+QVL ++ L++KKAYIS
Sbjct: 16 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T
Sbjct: 76 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRL 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+ IKE L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V +
Sbjct: 196 ARIKERLSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---N 251
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+Y
Sbjct: 252 PTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYY 311
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
IRH+DG P++SEAER+RVIQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L+
Sbjct: 312 IRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLT 371
Query: 357 IKRAEISTIGGKVKDTFYVTDVTG-NPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
+ RAE+ST G K +TFYV D G + VD K +++IR++IG T LQVK PP+E
Sbjct: 372 VTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQE 431
Query: 416 TTTGFFLGNFFKARTFQTFKLIRS 439
+ + F + F+ R+ + LIRS
Sbjct: 432 SPSRFLFSSLFRPRSLYSLGLIRS 455
>gi|297818020|ref|XP_002876893.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
gi|297322731|gb|EFH53152.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
Length = 456
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 269/448 (60%), Positives = 328/448 (73%), Gaps = 11/448 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE AK IRR+NPPRVVIDN C D TVIKVDS NKHGILL+V+QVL ++NL IKKAYI
Sbjct: 11 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVFNV D DG K+ D+ V+DYI++ L D S F+PS+RS++GV + ++T
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEIVLDYIRKSLGPDESTCFSPSMRSTIGVKQSVDYTV 130
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE TGTDRPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS
Sbjct: 131 IELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 190
Query: 179 TIKELLFNVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
I++LL VL G FR+ KT +S + +R+LHQ+MF DRDY+ E V E
Sbjct: 191 KIRKLLGYVLTGGSSGRRFREPKTMVSSALDDTHTDRKLHQLMFADRDYDEWENNVDD-E 249
Query: 235 DKSSR--PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
DK R P V V N+ + DY+++ ++ KDRPKLLFD V TLTDM YVV H ++ EA
Sbjct: 250 DKCGRVVPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPEA 309
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFR 351
YQE+YIRH DG P+ SEAER+RVI+CL+AAI+RR SEGL+LELCT DRVGLLSD+TRIFR
Sbjct: 310 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFR 369
Query: 352 ENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK 411
ENSL++ RAE+ T G K +TFYV D +G VD K I+SIR+ IG T LQVK A
Sbjct: 370 ENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDAKTIESIRQVIGQTILQVKGGNTDAKT 429
Query: 412 PPKETTTGFFLGNFFKARTFQTFKLIRS 439
P+++ TGF G FK+R+F F LIRS
Sbjct: 430 SPQDSPTGFLFG-VFKSRSFVNFGLIRS 456
>gi|18395601|ref|NP_565304.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|79316674|ref|NP_001030965.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|20197900|gb|AAD20075.2| putative uridylyl transferase [Arabidopsis thaliana]
gi|24030269|gb|AAN41308.1| putative uridylyl transferase [Arabidopsis thaliana]
gi|222424419|dbj|BAH20165.1| AT2G03730 [Arabidopsis thaliana]
gi|330250648|gb|AEC05742.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|330250649|gb|AEC05743.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
Length = 456
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/448 (59%), Positives = 329/448 (73%), Gaps = 11/448 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE AK IRR+NPPRVVIDN C D TVIKVDS NKHGILL+V+QVL ++NL IKKAYI
Sbjct: 11 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVFNV D DG K+ D+ V++YI++ L D S F+PS+RS++GV + ++T
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTV 130
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E TGTDRPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS
Sbjct: 131 VELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 190
Query: 179 TIKELLFNVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
I++LL VL G FR+ KT++S + +R+LHQ+MF DRDY+ E V E
Sbjct: 191 KIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDD-E 249
Query: 235 DKSSR--PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
DK R P V V N+ + DY+++ ++ KDRPKLLFD V TLTDM YVV H ++ +A
Sbjct: 250 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 309
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFR 351
YQE+YIRH DG P+ SEAER+RVI+CL+AAI+RR SEGL+LELCT DRVGLLSD+TRIFR
Sbjct: 310 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFR 369
Query: 352 ENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK 411
ENSL++ RAE+ T G K +TFYV D +G VD K I+SIR+ IG T LQVK A
Sbjct: 370 ENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVKGGNTDAKP 429
Query: 412 PPKETTTGFFLGNFFKARTFQTFKLIRS 439
P+++ TGF G FK+R+F F LIRS
Sbjct: 430 SPQDSPTGFLFG-VFKSRSFVNFGLIRS 456
>gi|224119726|ref|XP_002318147.1| predicted protein [Populus trichocarpa]
gi|222858820|gb|EEE96367.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/431 (60%), Positives = 319/431 (74%), Gaps = 8/431 (1%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMN PRVVI+N+ C ATVI+VD+V + G LL+V+Q L D+NLVI KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDVCEHATVIQVDTVYRQGTLLEVVQALADLNLVITKAYMSSDG 70
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
GWFM+VF+V D G KIRD+ +++ I++ LETDA S+ ++ ++EHT +E TGT
Sbjct: 71 GWFMNVFHVTDDGGNKIRDEGILNCIEKALETDAYMVKSMGK---MLLSKEHTLVELTGT 127
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVL DL CNVVNAEIW HN RAAAV+HVTD STG AI+DP++LS IKELL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEIWAHNARAAAVIHVTDQSTGTAIEDPRQLSLIKELL 187
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
+NVL+G D+R S+S PG ++ RRLHQ+MF RD+ER +D S RP VTV
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPLSE----DDNSVRPSVTV 243
Query: 245 LNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ ++DYTV+T S DRPKLLFD VCTLTDMQY+VFHG VNT EAYQE+YIRHVDGL
Sbjct: 244 SDCPDRDYTVVTATSIDRPKLLFDTVCTLTDMQYLVFHGTVNTSSDEAYQEYYIRHVDGL 303
Query: 304 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 363
P+SSEAER+RV++C++AAIERRA+EGL LEL T+D GL+SDITRI REN L KRAEIS
Sbjct: 304 PVSSEAERQRVMECIQAAIERRATEGLHLELFTDDHFGLISDITRILRENGLCPKRAEIS 363
Query: 364 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLG 423
T GK K F VTDV+GNPV+PK I IR+Q+G T +QVK + + T F L
Sbjct: 364 TKNGKAKHNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVKGNFKYVSEISPAETKKFPLW 423
Query: 424 NFFKARTFQTF 434
F+ F F
Sbjct: 424 ELFQMPRFPKF 434
>gi|22138100|gb|AAM93430.1| ACR5 [Arabidopsis thaliana]
Length = 446
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/448 (59%), Positives = 328/448 (73%), Gaps = 11/448 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE AK IRR+NPPRVVIDN C D TVIKVDS NKHGILL+V+QVL ++NL IKKAYI
Sbjct: 1 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVFNV D DG K+ D+ V++YI++ L D S F+PS+RS++GV + ++T
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTV 120
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E TGTDRPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS
Sbjct: 121 VELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 180
Query: 179 TIKELLFNVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
I++LL VL G FR+ KT++S + +R+LHQ+MF DRDY+ E V E
Sbjct: 181 KIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDD-E 239
Query: 235 DKSSR--PQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
DK R P V V N+ DY+++ ++ KDRPKLLFD V TLTDM YVV H ++ +A
Sbjct: 240 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 299
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFR 351
YQE+YIRH DG P+ SEAER+RVI+CL+AAI+RR SEGL+LELCT DRVGLLSD+TRIFR
Sbjct: 300 YQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFR 359
Query: 352 ENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK 411
ENSL++ RAE+ T G K +TFYV D +G VD K I+SIR+ IG T LQVK A
Sbjct: 360 ENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVKGGNTDAKP 419
Query: 412 PPKETTTGFFLGNFFKARTFQTFKLIRS 439
P+++ TGF G FK+R+F F LIRS
Sbjct: 420 SPQDSPTGFLFG-VFKSRSFVNFGLIRS 446
>gi|26452308|dbj|BAC43240.1| unknown protein [Arabidopsis thaliana]
Length = 425
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/426 (60%), Positives = 325/426 (76%), Gaps = 8/426 (1%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N+C ATVI+VDS N++GILL+V+Q+L D+NL I KAYISSDGGWFMDVFNV D DG K+
Sbjct: 2 NSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKV 61
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE TG DRPGL SE+ AVL L
Sbjct: 62 TDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLK 120
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS IK LL NVL+G + R+AKT +
Sbjct: 121 CSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNVLKGSNTPREAKTVV 180
Query: 202 SPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSK 259
S G ++ +RRLHQ+MF+DRDYE R+ ++D+ RP V V N ++KDY+V+T+R K
Sbjct: 181 SH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCK 239
Query: 260 DRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLE 319
DRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+RH+DG P+ SEAE++RVIQCLE
Sbjct: 240 DRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPVKSEAEKQRVIQCLE 299
Query: 320 AAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT 379
AAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++ RAE+ T GGK +TFYV+D +
Sbjct: 300 AAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTKGGKALNTFYVSDAS 359
Query: 380 GNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPKETTTGFFLGNFFKARTFQTFK 435
G +D K IDSIR+ IG T L+VK + + P E+ T F G FK+++F F
Sbjct: 360 GYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFLFGGLFKSKSFVNFG 419
Query: 436 LIRSYS 441
L+RSYS
Sbjct: 420 LVRSYS 425
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 20/186 (10%)
Query: 245 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
+N K TVI + S + +L ++V LTD+ + +++ F + DG
Sbjct: 1 MNSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNK 60
Query: 305 ISSEAERERVIQCL--EAAIERR--------ASEGLELELCTEDRVGLLSDITRIFRENS 354
++ E + + + L EA +++ +EL DR GLLS+++ +
Sbjct: 61 VTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLK 120
Query: 355 LSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQIGHTKLQVKRSTILAPKP 412
S+ AEI T + VT D+TG + DP+ + I+ + R+ +
Sbjct: 121 CSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLL--------RNVLKGSNT 172
Query: 413 PKETTT 418
P+E T
Sbjct: 173 PREAKT 178
>gi|294464028|gb|ADE77534.1| unknown [Picea sitchensis]
Length = 439
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/440 (56%), Positives = 325/440 (73%), Gaps = 11/440 (2%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
MN PRVVIDN C +AT++KVDS NKHGILL+ +QVL D+ L I KA +SSDG WFMDVF
Sbjct: 1 MNSPRVVIDNAVCGNATLVKVDSANKHGILLEAVQVLTDLKLNINKANVSSDGRWFMDVF 60
Query: 72 NVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-MPTEEHTSIEFTGTDRPGLF 130
V D +GKK+ D+ VI YI++ LET+ PS SVGV + ++HT+IE TGTDRPGL
Sbjct: 61 YVTDENGKKLTDEGVIGYIEKTLETNPCILPSFGKSVGVEVAADQHTAIELTGTDRPGLL 120
Query: 131 SEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
SE+ AVL+DL CNVV AE+WTHN R A +V+VTD TG I D +++ I+ELL NV+RG
Sbjct: 121 SEIFAVLSDLKCNVVEAEVWTHNRRVACLVYVTDEETGAPIDDGQKICKIEELLRNVMRG 180
Query: 191 YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV-----EDKSSRPQVTVL 245
+ R AKT ++ G+ + ERRLHQ+MF DRDYE+++ VGR ++ +++P VTV
Sbjct: 181 NSNIRGAKT-VASMGLTHTERRLHQLMFADRDYEKLDGTVGRAPPPLNDNDNAKPHVTVE 239
Query: 246 N-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
N +E+ Y+V+ ++ KDRPKLLFD+VCTLTDM+YVVFH +++ + +QE+YIRH DG P
Sbjct: 240 NCLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTHQEYYIRHTDGCP 299
Query: 305 ISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 364
++SEAER+RVIQCLEAAI RRASEG+ LELCT DRVGLLSD+TRIFREN +S+ RAE+ST
Sbjct: 300 VNSEAERQRVIQCLEAAIRRRASEGVRLELCTNDRVGLLSDVTRIFRENGMSVTRAEVST 359
Query: 365 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGN 424
G K + FYVTD GNPVDPK ++++RR+IG T LQVK + + P +E F GN
Sbjct: 360 RGDKAVNVFYVTDAAGNPVDPKTVEAVRREIGLTILQVKDNCMDTKSPRREPAIPFSFGN 419
Query: 425 FFKART---FQTFKLIRSYS 441
FK+++ + LI+SYS
Sbjct: 420 LFKSKSERFLYSLGLIKSYS 439
>gi|224134040|ref|XP_002321721.1| predicted protein [Populus trichocarpa]
gi|222868717|gb|EEF05848.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/403 (62%), Positives = 310/403 (76%), Gaps = 8/403 (1%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD YAKL+RR+N PRVV+DN+ C ATVI+VD+V + G LL+V+QVL D+NLV+ KAY+S
Sbjct: 2 DDAYAKLLRRVNSPRVVVDNDACEHATVIQVDTVKRQGALLEVVQVLTDLNLVMTKAYMS 61
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFM+VF V D G KIRD+++++ I++ LETDA ++S+ ++P++EHT IE
Sbjct: 62 SDGVWFMNVFYVTDDHGNKIRDEDIVNCIEKALETDACM---VKSTGKMLPSKEHTLIEL 118
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TGTDRPGL SEVCAVL DL CNVVNAEIW HN RAAAV+H+ D STG AI+DP++LS IK
Sbjct: 119 TGTDRPGLLSEVCAVLTDLRCNVVNAEIWAHNGRAAAVIHIADQSTGTAIEDPRKLSLIK 178
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
ELL+NVL+G+ DFR S+S PG ++ RRLHQ+MF RD+ER G D S RP
Sbjct: 179 ELLYNVLKGHGDFRTPIVSISSPGEIHIGRRLHQMMFAARDFERP----GSENDNSVRPY 234
Query: 242 VTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VTV + ++DYTV+T S DRPKL+FD VCTLTDMQY+VFHG V T +AYQE+YIRHV
Sbjct: 235 VTVFDCPDRDYTVVTATSIDRPKLVFDTVCTLTDMQYLVFHGTVITDSKKAYQEYYIRHV 294
Query: 301 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 360
DG P SSEAER+RVI+C++AAIERRASEGL LEL T+D GLLS ITRI REN L K A
Sbjct: 295 DGFPTSSEAERQRVIECIQAAIERRASEGLPLELFTDDHFGLLSYITRILRENGLWPKSA 354
Query: 361 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
EIST GK K ++ VTDV+GNPVDPK I I +Q+G T LQVK
Sbjct: 355 EISTRNGKAKHSYIVTDVSGNPVDPKTILLIHQQMGQTVLQVK 397
>gi|195607434|gb|ACG25547.1| ACR4 [Zea mays]
Length = 458
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/441 (57%), Positives = 324/441 (73%), Gaps = 14/441 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYIS
Sbjct: 16 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT
Sbjct: 76 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRXAVGVEPSSDHT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
IK L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR
Sbjct: 196 GRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 253
Query: 238 SRPQ--VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S P V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ+
Sbjct: 254 SNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQD 313
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
+YIRH+DG P++SEAER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN
Sbjct: 314 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENG 373
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP- 413
L++ RAE+ST G + +TFYV D G+ V+ + +++IR++IG T LQVK PKPP
Sbjct: 374 LTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVK-GHPEQPKPPV 432
Query: 414 --KETTTGFFLGN-FFKARTF 431
+++ T F + F+ R+
Sbjct: 433 AAQDSPTRFLFSSLLFRPRSL 453
>gi|414867234|tpg|DAA45791.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 459
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/441 (57%), Positives = 324/441 (73%), Gaps = 14/441 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYIS
Sbjct: 17 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 76
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT
Sbjct: 77 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHT 136
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+
Sbjct: 137 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 196
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
IK L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR
Sbjct: 197 GRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 254
Query: 238 SRPQ--VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S P V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ+
Sbjct: 255 SNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQD 314
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
+YIRH+DG P++SEAER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN
Sbjct: 315 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENG 374
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP- 413
L++ RAE+ST G + +TFYV D G+ V+ + +++IR++IG T LQVK PKPP
Sbjct: 375 LTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVK-GHPEQPKPPV 433
Query: 414 --KETTTGFFLGN-FFKARTF 431
+++ T F + F+ R+
Sbjct: 434 AAQDSPTRFLFSSLLFRPRSL 454
>gi|226492720|ref|NP_001142223.1| uncharacterized protein LOC100274391 [Zea mays]
gi|194707686|gb|ACF87927.1| unknown [Zea mays]
gi|223947587|gb|ACN27877.1| unknown [Zea mays]
gi|414867235|tpg|DAA45792.1| TPA: ACR4 [Zea mays]
Length = 458
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/441 (57%), Positives = 324/441 (73%), Gaps = 14/441 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYIS
Sbjct: 16 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT
Sbjct: 76 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
IK L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR
Sbjct: 196 GRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 253
Query: 238 SRPQ--VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S P V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ+
Sbjct: 254 SNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQD 313
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
+YIRH+DG P++SEAER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN
Sbjct: 314 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENG 373
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP- 413
L++ RAE+ST G + +TFYV D G+ V+ + +++IR++IG T LQVK PKPP
Sbjct: 374 LTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVK-GHPEQPKPPV 432
Query: 414 --KETTTGFFLGN-FFKARTF 431
+++ T F + F+ R+
Sbjct: 433 AAQDSPTRFLFSSLLFRPRSL 453
>gi|225425204|ref|XP_002266641.1| PREDICTED: uncharacterized protein LOC100250497 [Vitis vinifera]
gi|296088702|emb|CBI38152.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/445 (57%), Positives = 320/445 (71%), Gaps = 11/445 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + AT+IKVDS N+ G LL+V+QVLND++L+I++AYI
Sbjct: 10 VDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L A SLR SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I DP RL I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D R A T++S G N +RRLHQ+M+ DRDY + G D+ S+P
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVS-VGSTNTQRRLHQMMYADRDY---DMDSGSTNDR-SKP 244
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV N +K YTV+ +R DRPKLLFD VCTLTDMQYVVFH V EAYQE+YIRH
Sbjct: 245 LVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIRH 304
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
VDG PISSEAE++RVI CLEAAI RR SEG+ LELC+EDRVGLLSD+TRIFREN LS+ R
Sbjct: 305 VDGCPISSEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRENGLSVTR 364
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T G + + FYVTD +GNPV + I+++R++IG T L+VK + PP+E+
Sbjct: 365 AEVTTRGSQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVKDDA-YSKSPPQESGR- 422
Query: 420 FFLGNFFKART---FQTFKLIRSYS 441
F LGN F++R+ L+RSYS
Sbjct: 423 FSLGNLFRSRSEKVLYNLGLMRSYS 447
>gi|242038905|ref|XP_002466847.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
gi|241920701|gb|EER93845.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
Length = 453
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/443 (56%), Positives = 320/443 (72%), Gaps = 10/443 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+VIDN + A+AT+++VDS N++GILL+VIQV+ D+NLVI KAYI+
Sbjct: 15 DDEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVISKAYIT 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H
Sbjct: 75 SDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHN 134
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD T A+ D +RL
Sbjct: 135 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNARAAAVMRVTDEDTRLAVTDTERL 194
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSP-PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I+E L +LRG + R A ++S + ERRLHQ+M DD DYE++++ +
Sbjct: 195 ERIREKLSYLLRGGNLSRGAAMAVSSGTATTHTERRLHQMMLDDCDYEQLQQLA---PGQ 251
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S RP VTV N +KDY+V+T+R KDRPKLLFD VCTLTD+QYVVFH ++ +AYQEF
Sbjct: 252 SQRPNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEF 311
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
Y+RHV+G P+++E ER RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL
Sbjct: 312 YVRHVNGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSL 371
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
++ RAE++T G +TFYV TG VD K IDSIR+ IGH+ LQVK KE
Sbjct: 372 TVTRAEVTTRGRMAVNTFYVRGSTGEDVDQKAIDSIRQAIGHS-LQVKGQPEPQEAQKKE 430
Query: 416 TTTGFFLGNFFKARTFQTFKLIR 438
+ T F N F+ R+ +F +R
Sbjct: 431 SPTWFLFANLFRPRSLYSFGFMR 453
>gi|357121213|ref|XP_003562315.1| PREDICTED: uncharacterized protein LOC100840593 [Brachypodium
distachyon]
Length = 453
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 319/442 (72%), Gaps = 10/442 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPP +V+DN++C DAT+++VDS N++GILL+VIQVL D+NLVI KAYI+
Sbjct: 14 DDEYDNFIRKMNPPSIVVDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFN+ D +GKK++DK ++ DYI++ L D+ + P+ R SV V + H
Sbjct: 74 SDGGWFMDVFNITDKEGKKLKDKATLAQIEDYIRKSLGADSRYLPARRRSVDVAASANHN 133
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA+L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLANLKCNVVSAEIWTHNTRAAAVMQVTDQDTGLAVTDTERL 193
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSP-PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
IKE L +LRG + R A ++S + ERRLHQ+M DD D E++++ ++
Sbjct: 194 ERIKERLSYLLRGGNLSRGAAMAVSSGTSTTHTERRLHQMMLDDGDCEQLQR---HASNQ 250
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S RP VTV N +KDY+V+T+R KDRPKLLFD VCTLTD+ YVVFH ++ +AYQEF
Sbjct: 251 SQRPNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDANDNQAYQEF 310
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
Y+RHV+G P+++EAER RV+QCLEAAIERR EG++LELCT D+VGLLS++TRIFRENSL
Sbjct: 311 YVRHVNGSPMNTEAERLRVVQCLEAAIERRVWEGMKLELCTNDKVGLLSEVTRIFRENSL 370
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
++ RAE+ST G +TFYV G VD K IDSIR++IGH +QVK + KE
Sbjct: 371 TVTRAEVSTRGRTAVNTFYVCGSAGEAVDQKTIDSIRQEIGH-NIQVKGQPEPSEPQKKE 429
Query: 416 TTTGFFLGNFFKARTFQTFKLI 437
+ T F N F+ R+ + +
Sbjct: 430 SPTWFLFANLFRPRSLYSLGMF 451
>gi|212274877|ref|NP_001130980.1| uncharacterized protein LOC100192085 [Zea mays]
gi|194689578|gb|ACF78873.1| unknown [Zea mays]
gi|194690618|gb|ACF79393.1| unknown [Zea mays]
gi|194701104|gb|ACF84636.1| unknown [Zea mays]
gi|195614180|gb|ACG28920.1| ACR4 [Zea mays]
gi|223949731|gb|ACN28949.1| unknown [Zea mays]
gi|414871683|tpg|DAA50240.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/443 (56%), Positives = 319/443 (72%), Gaps = 12/443 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+VIDN + A+AT+++VDS N++GILL+VIQV+ D+NLVI KAYI+
Sbjct: 15 DDEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYIT 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H
Sbjct: 75 SDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHN 134
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL
Sbjct: 135 IIELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERL 194
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
I+E L + RG + R A S S + ERRLHQ+M DD DYE++++ + +S
Sbjct: 195 ERIREKLSYLFRGGNLSRGATVS-SRTATTHTERRLHQMMLDDGDYEQLQR---QAPGQS 250
Query: 238 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
RP VTV N +KDY+V+T+R KDR KLLFD VCTLTD+QYVVFH ++ +AYQEFY
Sbjct: 251 QRPNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFY 310
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
+RHV+G P+++E ER RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL+
Sbjct: 311 VRHVNGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLT 370
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP-PKE 415
+ RAE++T G +TFYV G VD K IDSIR IGH+ LQVK P+P KE
Sbjct: 371 VTRAEVTTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVK-GQAEPPEPQKKE 428
Query: 416 TTTGFFLGNFFKARTFQTFKLIR 438
+ T F N F+ R+ +F +R
Sbjct: 429 SPTWFLFANLFRPRSLYSFGFMR 451
>gi|414867236|tpg|DAA45793.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 433
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/431 (57%), Positives = 317/431 (73%), Gaps = 14/431 (3%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYISSDGGWFMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 72 NVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TGTDRP
Sbjct: 61 TVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRP 120
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK L+NV
Sbjct: 121 GLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNV 180
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ--VTVL 245
RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P V+V+
Sbjct: 181 FRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPVVSVV 238
Query: 246 N-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ++YIRH+DG P
Sbjct: 239 NWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHIDGCP 298
Query: 305 ISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 364
++SEAER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RAE+ST
Sbjct: 299 VNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 358
Query: 365 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP---KETTTGFF 421
G + +TFYV D G+ V+ + +++IR++IG T LQVK PKPP +++ T F
Sbjct: 359 RGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVK-GHPEQPKPPVAAQDSPTRFL 417
Query: 422 LGN-FFKARTF 431
+ F+ R+
Sbjct: 418 FSSLLFRPRSL 428
>gi|147855097|emb|CAN83845.1| hypothetical protein VITISV_001862 [Vitis vinifera]
Length = 465
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/431 (58%), Positives = 314/431 (72%), Gaps = 8/431 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + AT+IKVDS N+ G LL+V+QVLND++L+I++AYI
Sbjct: 10 VDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L A SLR SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I DP RL I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D R A T++S G N +RRLHQ+M+ DRDY + G D+ S+P
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVS-VGSTNTQRRLHQMMYADRDY---DMDSGSTNDR-SKP 244
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV N +K YTV+ +R DRPKLLFD VCTLTDMQYVVFH V EAYQE+YIRH
Sbjct: 245 LVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIRH 304
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
VDG PISSEAE++RVI CLEAAI RR SEG+ LELC+EDRVGLLSD+TRIFREN LS+ R
Sbjct: 305 VDGCPISSEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRENGLSVTR 364
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T G + + FYVTD +GNPV + I+++R++IG T L+VK + PP+E+
Sbjct: 365 AEVTTRGSQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVK-DDAYSKSPPQESGR- 422
Query: 420 FFLGNFFKART 430
F LGN F++R+
Sbjct: 423 FSLGNLFRSRS 433
>gi|326500948|dbj|BAJ95140.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/447 (55%), Positives = 319/447 (71%), Gaps = 20/447 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+R MNPPRVVIDN+ DATVI+VDSVN HG LL V+QV+ D+NLVI+KAY SS
Sbjct: 8 DEYAKLVRGMNPPRVVIDNDASDDATVIRVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVFNV D DG K+ D I YIQ+ LE + + P +R++VG++P+E++TSIE T
Sbjct: 68 DGSWFMDVFNVTDRDGNKVLDTPTISYIQKTLEAEDCYYPEVRNTVGIVPSEDYTSIELT 127
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD--HSTGYAIKDPKRLSTI 180
GTDRPGL SEVCAVLA + C V +AE+WTHN R AAVV VTD + G AI+D R++ I
Sbjct: 128 GTDRPGLLSEVCAVLAGMQCAVRSAELWTHNTRVAAVVQVTDAAKAAGGAIEDDARIADI 187
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
L N+LRG + R A + + ++ERRLHQ+MF+DRDY G R
Sbjct: 188 SRRLDNLLRGQNGVRAAAAA----SLTHKERRLHQMMFEDRDY-------GAAGPPDPRT 236
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIR 298
+V+V + E+ YTV+ +R +DRPKLLFD VCT+TDMQYVV HG V++ AYQE+YIR
Sbjct: 237 EVSVTHCAERGYTVVVVRCRDRPKLLFDTVCTITDMQYVVHHGTVSSEPAGGAYQEYYIR 296
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
HVDG P+S+EAER RV+QCLEAA+ERR ++GLELE+ T+DR GLLSD+TRIFREN L+I+
Sbjct: 297 HVDGHPVSTEAERRRVVQCLEAAVERRTADGLELEVRTDDRAGLLSDVTRIFRENGLTIR 356
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTIL----APKPPK 414
RAEIS+ G+ DTFY++D G+PV+ K I++IR QIG L+VK + + +
Sbjct: 357 RAEISSEDGEAVDTFYLSDPQGHPVEAKTIEAIRAQIGEATLRVKNNPLADDGGSTSEVA 416
Query: 415 ETTTGFFLGNFFK-ARTFQTFKLIRSY 440
+T F GN FK R FQ F LI+ Y
Sbjct: 417 AGSTAFLFGNLFKFYRPFQNFGLIKLY 443
>gi|115454015|ref|NP_001050608.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa Japonica Group]
gi|108709666|gb|ABF97461.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113549079|dbj|BAF12522.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|125860402|dbj|BAF46924.1| ACT-domain repeat protein 5 [Oryza sativa Japonica Group]
gi|222625325|gb|EEE59457.1| hypothetical protein OsJ_11646 [Oryza sativa Japonica Group]
Length = 453
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/442 (55%), Positives = 316/442 (71%), Gaps = 10/442 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+ IDN++C DAT+++VDS N++GILL+VIQVL D+NLVI KAYI+
Sbjct: 14 DDEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGW MDVFN+ D +G+K++DK I DYI + L D+ + PS R SV V + +H
Sbjct: 74 SDGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN 133
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD TG A+ D RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRL 193
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGI-MNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I++ L +LRG + R A ++S + ERRLHQ+M DD D+E++ + ++
Sbjct: 194 ERIRDRLSYLLRGGNLSRGAAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHR---HPPNQ 250
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S RP VTV N +KDY+V+T+R KDRPKLLFD VCTLTD+ YVVFH ++ +AYQEF
Sbjct: 251 SQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEF 310
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
Y+RHV+G P+ +EA+R RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL
Sbjct: 311 YVRHVNGSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSL 370
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
++ RAE+ST G +TFYV D TG VD K IDSIR+ IG +QVK + KE
Sbjct: 371 TVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIGQ-NIQVKGQPEPSEPQKKE 429
Query: 416 TTTGFFLGNFFKARTFQTFKLI 437
+ T F N F+ R+ +F +
Sbjct: 430 SPTWFLFANLFRPRSLYSFGMF 451
>gi|242040599|ref|XP_002467694.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
gi|241921548|gb|EER94692.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
Length = 427
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/439 (57%), Positives = 319/439 (72%), Gaps = 23/439 (5%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
MNPPRV IDN +C +ATVI VDS NK+G+LL+V+QVL D+ L++KKAYISSDGGWFMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGVLLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 72 NVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
NV + G KI D+ V+ D I + + D+ PS R ++GV P+ ++T IE TGTDRP
Sbjct: 61 NVTNQGGHKIMDESVLEGIKDCIYKSIGPDSCLLPSRRRAIGVEPSSDYTLIELTGTDRP 120
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL SEV AVL +L CNVVNAE+WTHN+RAAAV+ VTD +G AI D +RL IKE L NV
Sbjct: 121 GLLSEVSAVLTNLECNVVNAELWTHNERAAAVMQVTDRKSGLAISDAERLGRIKERLCNV 180
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK--AVGRVEDKSSRPQVTVL 245
+G R AKT+++ GI + ERRLHQ+M +DRDY+R +K A G S V+V+
Sbjct: 181 FKGRS--RDAKTTVAM-GITHTERRLHQMMLEDRDYDRHDKDRASG-----SPTSMVSVV 232
Query: 246 N-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T +AYQ++YIRH+DG P
Sbjct: 233 NWLQKDYSVVTIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPDAYQDYYIRHIDGSP 292
Query: 305 ISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 364
++SEAER+R+I CLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RAE+ST
Sbjct: 293 VNSEAERKRIIHCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 352
Query: 365 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK----ETTTGF 420
G K +TFYV D G+ V+ K +++IR++IG T LQVK P PK E+ T F
Sbjct: 353 KGDKAINTFYVRDAAGSSVELKTLEAIRQEIGQTVLQVKGH----PDQPKSLTQESPTRF 408
Query: 421 FLGNFFKARTFQTFKLIRS 439
+ F+ R+ LI S
Sbjct: 409 LFSSLFRPRSLCNLGLIGS 427
>gi|218193266|gb|EEC75693.1| hypothetical protein OsI_12504 [Oryza sativa Indica Group]
Length = 453
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/442 (55%), Positives = 315/442 (71%), Gaps = 10/442 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+ IDN++C DAT+++VDS N++GILL+VIQVL D+NLVI KAYI+
Sbjct: 14 DDEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGW MDVFN+ D +G+K++DK I DYI + L D+ + PS R SV V + +H
Sbjct: 74 SDGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN 133
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD TG A+ D RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRL 193
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGI-MNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I++ L +LRG + R ++S + ERRLHQ+M DD D+E++ + ++
Sbjct: 194 ERIRDRLSYLLRGGNLSRGTAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHR---HPPNQ 250
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S RP VTV N +KDY+V+T+R KDRPKLLFD VCTLTD+ YVVFH ++ +AYQEF
Sbjct: 251 SQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEF 310
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
Y+RHV+G P+ +EA+R RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL
Sbjct: 311 YVRHVNGSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSL 370
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
++ RAE+ST G +TFYV D TG VD K IDSIR+ IG +QVK + KE
Sbjct: 371 TVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIGQ-NIQVKGQPEPSEPQKKE 429
Query: 416 TTTGFFLGNFFKARTFQTFKLI 437
+ T F N F+ R+ +F +
Sbjct: 430 SPTWFLFANLFRPRSLYSFGMF 451
>gi|414869679|tpg|DAA48236.1| TPA: ACR4 [Zea mays]
Length = 453
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/447 (55%), Positives = 318/447 (71%), Gaps = 19/447 (4%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMNPPRVVIDN++C +ATVI+VD VNKHGILL+ +QVL D+NLVI KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
WFM VFNV D DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYA--LPEDQFTSIELTGA 133
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL
Sbjct: 134 DRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELL 193
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS----SRP 240
+V+RG + T +S ERRLH +M D E+A G ++ +RP
Sbjct: 194 RDVMRGDGTCNRGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN----TGRTEAYQEF 295
+V V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ + EAYQE+
Sbjct: 248 KVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEY 307
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
YIRHVDG P+ S+AER R+++CLEAA+ERRAS GLELE+ TEDRVGLLS+ITR+FRENSL
Sbjct: 308 YIRHVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSL 367
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP-KPPK 414
SI RA I+T GK +DTFYV+D GNPVD + +D++ Q+GH L+VKR AP K
Sbjct: 368 SIIRAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEA 427
Query: 415 ETTTGFFLGNFFKARTFQTFKLIRSYS 441
E LG+ K+ +FQ +LIRSYS
Sbjct: 428 EGGAVSVLGSLLKS-SFQGLRLIRSYS 453
>gi|255547636|ref|XP_002514875.1| amino acid binding protein, putative [Ricinus communis]
gi|223545926|gb|EEF47429.1| amino acid binding protein, putative [Ricinus communis]
Length = 450
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/445 (55%), Positives = 317/445 (71%), Gaps = 8/445 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE+ KL+ RMNPPRV +DN T AT+IKVDS NK G LL+V+QVL D++L+I++AYI
Sbjct: 10 MDDEFEKLVIRMNPPRVTVDNATSRKATLIKVDSANKRGSLLEVVQVLTDLDLLIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L A SLR SVGV E+T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRACSFRSLRRSVGVQTASENTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I +P RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEVTGSPINEPDRLTKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D R A T++S G ++ERRLHQ+M+ DRDY+ ++ G + +P
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVS-VGSTHKERRLHQMMYADRDYD-IDDGEGGSTSERRKP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV N +K YTV+ +R DRPKLLFD VCTLTDMQYVV+H + EAYQE+YIRH
Sbjct: 248 LVTVENCADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAYQEYYIRH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG PISSEAER+RVI CLEAAI RR EG+ LELC+EDR+GLLS++TRIFREN LS+ R
Sbjct: 308 MDGSPISSEAERQRVINCLEAAIRRRNPEGIRLELCSEDRIGLLSEVTRIFRENGLSVTR 367
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T + + FYVTD +G PV + I+++R++IG T L+VK + PP+E
Sbjct: 368 AEVTTRDSQAVNAFYVTDASGYPVKSETIEAVRKEIGLTILRVKDDS--NSPPPQEERGR 425
Query: 420 FFLGNFFKART---FQTFKLIRSYS 441
F LGN F++R+ LI+SYS
Sbjct: 426 FSLGNIFRSRSEKFLYNLGLIKSYS 450
>gi|449445562|ref|XP_004140541.1| PREDICTED: uncharacterized protein LOC101218687 [Cucumis sativus]
gi|449526489|ref|XP_004170246.1| PREDICTED: uncharacterized LOC101218687 [Cucumis sativus]
Length = 451
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/445 (56%), Positives = 321/445 (72%), Gaps = 7/445 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN++ AT+IKVDS NK G LL+V+QVLND+NL+I++AYI
Sbjct: 10 LDDEFEKLVNRMNPPRVTVDNDSSRKATLIKVDSANKRGSLLEVVQVLNDLNLIIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L SLR SVGV EEHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQRGNKLSENDVAERIQQSLGPRGRSFRSLRRSVGVQAAEEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD +TG+ I DP RL I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGFPIDDPDRLGKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D R A T++S G ++ERRLHQ+M+ DRDY++ + G ++ +P
Sbjct: 190 KQLLLFVLKGDRDKRSANTAVS-VGSTHKERRLHQMMYADRDYDQDDLDCGSTSER-RKP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + +K YTV+ +RS DRPKLLFD VCTLTDMQYVV+H V EA QE+YIRH
Sbjct: 248 LVTVESCADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEATQEYYIRH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG PISSEAER+RVI CLEAAI RR SEG+ LELC++DR GLLSD+TRIFREN LS+ R
Sbjct: 308 MDGSPISSEAERQRVIHCLEAAIRRRTSEGIRLELCSDDRAGLLSDVTRIFRENGLSVTR 367
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T G + + FYVTD +GNPV ++I+++R++IG T L VK P E++
Sbjct: 368 AEVTTRGTQAVNVFYVTDASGNPVKSEMIEAVRKEIGLTVLCVKDDEFCMKSPSPESSR- 426
Query: 420 FFLGNFFKART---FQTFKLIRSYS 441
F LGN F++R+ LI+S S
Sbjct: 427 FSLGNLFRSRSEKFLYNLGLIKSCS 451
>gi|356568931|ref|XP_003552661.1| PREDICTED: uncharacterized protein LOC100816426 [Glycine max]
Length = 450
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/445 (56%), Positives = 321/445 (72%), Gaps = 8/445 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ DE+ KL+ RMNPPRV +DN + TVIKVDS NK G LL+V+QVL D+NL +++AYI
Sbjct: 10 LHDEFEKLVIRMNPPRVAVDNISSGTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D +GKK +V D IQQ L AS SLR SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD +TG +I DP RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL VL+G D + A T++S G +++RRLHQ+M+ DRDY+ + G D+ ++
Sbjct: 190 KQLLLYVLKGDIDKKSANTAVS-VGSTHKDRRLHQLMYADRDYDVDDGDSGSTSDR-NKL 247
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + I+K YTV+ +R DRPKLLFD VCTLTDMQYVV+HG V EAYQE+YIRH
Sbjct: 248 LVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRH 307
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
VDG PISSEAER+RVI CLEAA+ RR SEG++LELC EDRVGLLSD+TRIFREN LS+ R
Sbjct: 308 VDGSPISSEAERQRVIHCLEAAVRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNR 367
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T G + + FYVTDV+GNPV + I+++R++IG T L VK + KPP + +
Sbjct: 368 AEVTTRGSQAMNVFYVTDVSGNPVKSETIETVRKEIGLTILHVKDD--VCSKPPPQESGK 425
Query: 420 FFLGNFFKART---FQTFKLIRSYS 441
F L N F++ + L++SYS
Sbjct: 426 FSLSNLFRSSSEKFLYNLGLMKSYS 450
>gi|449468820|ref|XP_004152119.1| PREDICTED: uncharacterized protein LOC101215960 [Cucumis sativus]
Length = 449
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/443 (56%), Positives = 314/443 (70%), Gaps = 8/443 (1%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV IDN + AT+IKVDS N+HG LL+V+QVL D+NL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +GKK+ D V + IQQ L A SLR SVGV EHT+IE +
Sbjct: 71 DGEWFMDVFHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELS 130
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL CNVV AE+WTHN R A+VV++TD ++G I DP L+ IK+
Sbjct: 131 GRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQ 190
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
LL VL+G D A T++S ++ERRLHQ+M+ DRD++ + E SRP V
Sbjct: 191 LLLYVLKGDRDKHSANTAVSMNS-THKERRLHQMMYADRDFDLNYTSCS--ESYQSRPLV 247
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +EK YTV+ +R DRPKLLFD VCTLTDMQYVV+H + EAYQE++IRHVD
Sbjct: 248 TVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRHVD 307
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSEAER+RVI CLEAAI RR +EG++LELC+EDRVGLL+D+TRIFREN LS+ RAE
Sbjct: 308 GSPISSEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRENGLSVTRAE 367
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 421
++T G + + FYVTD +GN V + I ++R IG T L VK + PP+E +GF
Sbjct: 368 VTTRGTQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKDDEQQSKCPPQE-GSGFS 426
Query: 422 LGNFFKART---FQTFKLIRSYS 441
LGN F++R+ LI+S S
Sbjct: 427 LGNLFRSRSEKVLYNLGLIKSCS 449
>gi|449484676|ref|XP_004156949.1| PREDICTED: uncharacterized LOC101215960 [Cucumis sativus]
Length = 449
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/443 (56%), Positives = 313/443 (70%), Gaps = 8/443 (1%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV IDN + AT+IKVDS N+HG LL+V+QVL D+NL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDV +V D +GKK+ D V + IQQ L A SLR SVGV EHT+IE +
Sbjct: 71 DGEWFMDVLHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELS 130
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL CNVV AE+WTHN R A+VV++TD ++G I DP L+ IK+
Sbjct: 131 GRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQ 190
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
LL VL+G D A T++S ++ERRLHQ+M+ DRD++ + E SRP V
Sbjct: 191 LLLYVLKGDRDKHSANTAVSMNS-THKERRLHQMMYADRDFDLNYTSCS--ESYQSRPLV 247
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +EK YTV+ +R DRPKLLFD VCTLTDMQYVV+H + EAYQE++IRHVD
Sbjct: 248 TVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRHVD 307
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSEAER+RVI CLEAAI RR +EG++LELC+EDRVGLL+D+TRIFREN LS+ RAE
Sbjct: 308 GSPISSEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRENGLSVTRAE 367
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 421
++T G + + FYVTD +GN V + I ++R IG T L VK + PP+E +GF
Sbjct: 368 VTTRGTQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKDDEQQSKCPPQE-GSGFS 426
Query: 422 LGNFFKART---FQTFKLIRSYS 441
LGN F++R+ LI+S S
Sbjct: 427 LGNLFRSRSEKVLYNLGLIKSCS 449
>gi|226501350|ref|NP_001147811.1| ACR4 [Zea mays]
gi|195613876|gb|ACG28768.1| ACR4 [Zea mays]
Length = 453
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/447 (55%), Positives = 312/447 (69%), Gaps = 19/447 (4%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMNPPRVVIDN++C +ATVI+VD VNKHGILL+ +QVL D+NLVI KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
WFM VFNV D DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYA--LPEDQFTSIELTGA 133
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL
Sbjct: 134 DRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELL 193
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD----RDYERVEKAVGRVEDKSSRP 240
+V+RG T +S ERRLH +M D E +RP
Sbjct: 194 RDVMRGDGTCNHGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGGDESGGCGVARP 247
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN----TGRTEAYQEF 295
+V V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ + EAYQE+
Sbjct: 248 KVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEY 307
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
YIRHVDG P+ S+AER R+++CLEAA+ERRAS GLELE+ TEDRVGLLS+ITR+FRENSL
Sbjct: 308 YIRHVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSL 367
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP-KPPK 414
SI RA I+T GK +DTFYV+D GNPVD + +D++ Q+GH L+VKR AP K
Sbjct: 368 SIIRAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEA 427
Query: 415 ETTTGFFLGNFFKARTFQTFKLIRSYS 441
E LG+ K+ +FQ +LIRSYS
Sbjct: 428 EGGAVSVLGSLLKS-SFQGLRLIRSYS 453
>gi|219885449|gb|ACL53099.1| unknown [Zea mays]
gi|414867237|tpg|DAA45794.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 440
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/427 (57%), Positives = 313/427 (73%), Gaps = 14/427 (3%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
RV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYISSDGGWFMDVF V +
Sbjct: 12 RVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVTN 71
Query: 76 CDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFS 131
G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TGTDRPGL S
Sbjct: 72 QSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRPGLLS 131
Query: 132 EVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY 191
EV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK L+NV RG
Sbjct: 132 EVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNVFRGR 191
Query: 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ--VTVLN-IE 248
R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P V+V+N ++
Sbjct: 192 S--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPVVSVVNWLQ 249
Query: 249 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 308
K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ++YIRH+DG P++SE
Sbjct: 250 KYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHIDGCPVNSE 309
Query: 309 AERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGK 368
AER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RAE+ST G +
Sbjct: 310 AERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDE 369
Query: 369 VKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP---KETTTGFFLGN- 424
+TFYV D G+ V+ + +++IR++IG T LQVK PKPP +++ T F +
Sbjct: 370 AVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP-EQPKPPVAAQDSPTRFLFSSL 428
Query: 425 FFKARTF 431
F+ R+
Sbjct: 429 LFRPRSL 435
>gi|195970384|gb|ACG60673.1| hypothetical protein BoB028L01.070 [Brassica oleracea var.
alboglabra]
Length = 425
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/449 (55%), Positives = 318/449 (70%), Gaps = 43/449 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN++C +ATVI+VDS N++GILL+V+Q+L D++L I KAYI
Sbjct: 12 MDDEYEKLIRRMNPPRVVIDNDSCKEATVIRVDSANEYGILLEVVQILTDLDLTITKAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV DG K+ D+ V+DYIQ+ L +A F+ SLR SVGV+P+ + T IE
Sbjct: 72 SSDGGWFMDVFNVTHQDGNKVTDEVVLDYIQKSLGPEACFSTSLR-SVGVIPSTDSTVIE 130
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD TG A+ DP+RLS I
Sbjct: 131 LTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPERLSLI 190
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKS 237
K LL NVL+G + ++AKT +S G ++ +RRLHQ+MF+DRDYE V+ V+D+
Sbjct: 191 KSLLRNVLKGSNTPKEAKTVVS-QGEVHTDRRLHQMMFEDRDYENGVMVDDDSSNVQDER 249
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
RP V V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+
Sbjct: 250 QRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEY- 308
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
GL+LELCT DRVGLLS++TRIFRENSL+
Sbjct: 309 --------------------------------GLKLELCTTDRVGLLSNVTRIFRENSLT 336
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPP 413
+ RAE+ T GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + KPP
Sbjct: 337 VTRAEVKTKGGKAVNTFYVSDASGYSIDAKTIDSIRQTIGKTLLKVKNKPKDQQQREKPP 396
Query: 414 -KETTTGFFLGNFFKARTFQTFKLIRSYS 441
+E+ T F G FK+++F F L+RSYS
Sbjct: 397 SQESPTRFLFGGLFKSKSFVNFGLVRSYS 425
>gi|414587548|tpg|DAA38119.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/444 (55%), Positives = 308/444 (69%), Gaps = 9/444 (2%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+RRMNPPRVVIDN DATVIKVDSVN HG LL V+QV+ D+NLVI+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMD FNV D DG K+ D I YIQ+ LE D + P ++VG++P+ ++TSIE T
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDRPGL SEVCAVLA + V +AE+WTHN R AAVVHVTD TG AI+D R++ I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L N+LR + D R + S +++ERRLHQ+MFDDR E A D S R +V
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVE--GHAAAAPPDGSLRTEV 247
Query: 243 TVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVD 301
+V + E+ YT + +R +DRPKLLFD VCT+TDM+YVV HG V+ AYQE+YIRHVD
Sbjct: 248 SVTHAERGYTAVVVRCRDRPKLLFDTVCTITDMEYVVHHGTVSAEPGGGAYQEYYIRHVD 307
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G I E E++R+++CL AAIERR ++GLELE+ T DR GLLSDITRIFREN L+I+RAE
Sbjct: 308 GHAIRCEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIRRAE 367
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILA---PKPPKETTT 418
IS+ G+ DTFY++D G PV+ K I++IR QIG L+V+ + TT
Sbjct: 368 ISSSDGEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNPFGTGDDADMAGAGTT 427
Query: 419 GFFLGNFFK-ARTFQTFKLIRSYS 441
F GN FK R FQ+F LI+ YS
Sbjct: 428 AFIFGNLFKFYRPFQSFSLIKLYS 451
>gi|226498746|ref|NP_001152134.1| ACR4 [Zea mays]
gi|195653115|gb|ACG46025.1| ACR4 [Zea mays]
Length = 451
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/444 (55%), Positives = 309/444 (69%), Gaps = 9/444 (2%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+RRMNPPRVVIDN DATVIKVDSVN HG LL V+QV+ D+NLVI+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMD FNV D DG K+ D I YIQ+ LE D + P ++VG++P+ ++TSIE T
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDRPGL SEVCAVLA + V +AE+WTHN R AAVVHVTD TG AI+D R++ I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L N+LR + D R + S +++ERRLHQ+MFDDR E A D S R +V
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVE--GHAATAPPDGSLRTEV 247
Query: 243 TVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVD 301
+V + E+ YT + +R +DRPKLLFD VCT+TDM+YVV HG V+ AYQE+YIRHVD
Sbjct: 248 SVTHAERGYTAVVVRCRDRPKLLFDTVCTITDMKYVVHHGTVSAEPGGGAYQEYYIRHVD 307
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G I E E++R+++CL AAIERR ++GLELE+ T DR GLLSDITRIFREN L+I+RAE
Sbjct: 308 GHAIRCEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIRRAE 367
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILA---PKPPKETTT 418
IS+ G+ DTFY++D G PV+ K I++IR QIG L+V+ ++ TT
Sbjct: 368 ISSSDGEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNSFGTGDHADVAGAGTT 427
Query: 419 GFFLGNFFK-ARTFQTFKLIRSYS 441
F GN FK R FQ+F LI+ YS
Sbjct: 428 AFIFGNLFKFYRPFQSFSLIKLYS 451
>gi|125562330|gb|EAZ07778.1| hypothetical protein OsI_30031 [Oryza sativa Indica Group]
Length = 463
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/452 (55%), Positives = 323/452 (71%), Gaps = 14/452 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+RRMNPP VVIDN++C ATVI+VD V KHGILL+ +QVL D+NLVI KAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG-VMPTEEHTSIE 120
SDG WFMDVFNV D DG K+++KEV D I++ LE++ P S G P+EE T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVPPASSPAGGAAPSEETTCIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS +
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ELL NV++G D RK T++S G N ERRLH++M DD D R + G V
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVSL-GAANAERRLHRLMLDDGDAGRCGEERGGVAAA 252
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT---GRTEAY 292
++ +V V++ E+ YTV+ +R +DRP+LLFD +C LTD+ YVVFHG V+ EAY
Sbjct: 253 KAKAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAY 312
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRE 352
QE+Y+RHVDG P+ +AER R+++CLEAA+ERRAS+GLELE+ TEDR GLLS+ITR+FRE
Sbjct: 313 QEYYVRHVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFRE 372
Query: 353 NSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILA 409
NSLSI RA I+T G+ DTFYV+D GNPVD K ++++ Q+GH L+VK R+ I
Sbjct: 373 NSLSIIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINR 432
Query: 410 PKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
+ +GN K +FQ F+LIRSYS
Sbjct: 433 AEDSGGGGAASIIGNLLKG-SFQGFRLIRSYS 463
>gi|115477501|ref|NP_001062346.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|42761394|dbj|BAD11662.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|45735790|dbj|BAD13153.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113624315|dbj|BAF24260.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|125860404|dbj|BAF46925.1| ACT-domain repeat protein 8 [Oryza sativa Japonica Group]
gi|215692655|dbj|BAG88075.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741115|dbj|BAG97610.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 463
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/452 (55%), Positives = 324/452 (71%), Gaps = 14/452 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+RRMNPP VVIDN++C ATVI+VD V KHGILL+ +QVL D+NLVI KAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIE 120
SDG WFMDVFNV D DG K+++KEV D I++ LE+ D P+ + G P+EE T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS +
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ELL NV++G D RK T++S G N ERRLH++M DD D R + G V
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVSL-GAANAERRLHRLMLDDGDAGRCGEERGGVAAA 252
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT---GRTEAY 292
++ +V V++ E+ YTV+ +R +DRP+LLFD +C LTD+ YVVFHG V+ EAY
Sbjct: 253 KAKAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAY 312
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRE 352
QE+Y+RHVDG P+ +AER R+++CLEAA+ERRAS+GLELE+ TEDR GLLS+ITR+FRE
Sbjct: 313 QEYYVRHVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFRE 372
Query: 353 NSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILA 409
NSLSI RA I+T G+ DTFYV+D GNPVD K ++++ Q+GH L+VK R+ I
Sbjct: 373 NSLSIIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINR 432
Query: 410 PKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
+ +GN K +FQ F+LIRSYS
Sbjct: 433 AEDSGGGGAAAIIGNLLKG-SFQGFRLIRSYS 463
>gi|115458090|ref|NP_001052645.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|38347211|emb|CAD40537.2| OSJNBa0055C08.5 [Oryza sativa Japonica Group]
gi|113564216|dbj|BAF14559.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|116309365|emb|CAH66445.1| OSIGBa0145N07.1 [Oryza sativa Indica Group]
gi|125548085|gb|EAY93907.1| hypothetical protein OsI_15680 [Oryza sativa Indica Group]
gi|125860408|dbj|BAF46927.1| ACT-domain repeat protein 6 [Oryza sativa Japonica Group]
gi|215695164|dbj|BAG90355.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 470
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/458 (55%), Positives = 317/458 (69%), Gaps = 20/458 (4%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+R MNPPRVV+DN C +ATVI+VDSV+ HG LL V+QV+ D+ LVI+KAY S
Sbjct: 15 DDEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFS 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFMDVFNV D DG K+ D + I YIQ LE D + P +R++VG++P EE+T IE
Sbjct: 75 SDGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIEL 134
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT-DHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA + C V +AE+WTHN R AAVVHVT D +G AI+D R++ I
Sbjct: 135 TGTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADI 194
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-----GRVED 235
L N+LRG R A + +P G+ ++ERRLHQ+MFDDRDY+ A GR
Sbjct: 195 STRLGNLLRGQSGVRAAAAA-APGGLTHKERRLHQMMFDDRDYDGGGGAASSSPRGRSPT 253
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQE 294
++ VT E+ YT + +R +DRPKLLFD VCT+TDM YV+ HG V++ R AYQE
Sbjct: 254 PATEVSVTPC-AERGYTAVVVRCRDRPKLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQE 312
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
+YIRHVDG P+ SEAER+RV+QCLEAAIERR ++GL LE+ T DR GLLSD+TRIFREN
Sbjct: 313 YYIRHVDGDPVRSEAERQRVVQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENG 372
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 414
L+I+RAEIS+ G+ DTFY++D G+PV+ K ID+IR QIG L+VK +
Sbjct: 373 LTIRRAEISSERGEAVDTFYLSDPQGHPVEAKTIDAIRAQIGEATLRVKHNPFADGDGAG 432
Query: 415 ET----------TTGFFLGNFFK-ARTFQTFKLIRSYS 441
+T F GN FK R FQ F LI+ YS
Sbjct: 433 GGGGGATDDVAGSTAFLFGNLFKFYRPFQNFSLIKLYS 470
>gi|294460934|gb|ADE76039.1| unknown [Picea sitchensis]
Length = 454
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/451 (54%), Positives = 318/451 (70%), Gaps = 17/451 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D ++ L +R++PP V IDN+TC D +++KV+S N+HGILL+V+QVL D++L+I KAYI
Sbjct: 9 FDPDFESLNQRIHPPMVCIDNDTCEDCSLVKVESANRHGILLEVVQVLTDLDLIISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPS-----LRSSVGVMPTEE 115
SSDG WFMDVF+V D G K+ D+ +IDYIQQ L + + L +VGV E
Sbjct: 69 SSDGRWFMDVFHVTDQLGNKLTDQRIIDYIQQALGAKQGGSTTEVKTCLGRTVGVQSIGE 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE TGTDRPGL SE+ AVL +L CNVV AE+WTHN R A VV+VTD ST I++P+
Sbjct: 129 HTAIELTGTDRPGLLSEISAVLTNLKCNVVAAEVWTHNMRVACVVYVTDESTSRPIEEPE 188
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
+L+ IKE L NVL+G DD R KT S G+ + ERRLHQ+MF DRDYE + R
Sbjct: 189 QLAAIKEQLSNVLKGNDDRRGVKTDFSM-GLTHTERRLHQMMFADRDYEGPDT---RSLG 244
Query: 236 KSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
++ RP + + N EK Y+V+T+ KDRPKLLFD VCTLTDMQYVV H + + T A QE
Sbjct: 245 ENGRPIIKIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGTYALQE 304
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
+YIRH+DG + +E E++RVI+CLEAAIERR SEG+ LELCT DRVGLLSDITRIFREN
Sbjct: 305 YYIRHMDGCTLDTEGEKQRVIKCLEAAIERRVSEGVRLELCTSDRVGLLSDITRIFRENG 364
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP-P 413
LS+ RA+++T K + FYVTD +GNPVD KI++++RR+IGHT LQVK S +P+P P
Sbjct: 365 LSVTRADVTTRADKAVNVFYVTDTSGNPVDMKIVEAMRREIGHTILQVK-SIPSSPRPCP 423
Query: 414 KET--TTGFFLGNFFKA---RTFQTFKLIRS 439
+T F G+ K+ R F LI+S
Sbjct: 424 TDTGDKAKFSFGSLLKSQLERLSYNFGLIKS 454
>gi|242082075|ref|XP_002445806.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
gi|241942156|gb|EES15301.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
Length = 461
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/449 (55%), Positives = 314/449 (69%), Gaps = 15/449 (3%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMNPPRVVIDN+ C +ATVI+VD V KHGILL+ +QVL D+NLVI KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDACDNATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
WFMDVFNV D DG K++++EVID+IQ+ LE+D P V P ++ TSIE TG
Sbjct: 76 NWFMDVFNVTDQDGSKLQNREVIDHIQKCLESDGYLPPPANGGF-VPPEDQFTSIELTGA 134
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVLA L CN+V AE+WTH+ RAAAV+ +TD +TG AI D RLS +ELL
Sbjct: 135 DRPGLLSEVCAVLAALSCNIVKAEVWTHDRRAAAVIQITDEATGLAIHDVGRLSRAQELL 194
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDR------DYERVEKAVGRVEDKSS 238
N+++ + T +S G ERRLH++M DDR E+ G + +
Sbjct: 195 SNLMQSDGRCNRGATGVS-VGTARTERRLHKMMLDDRVGGGEEAVGGGEERGGCGKARHK 253
Query: 239 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT--GRTEAYQEF 295
+V V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ EAYQE+
Sbjct: 254 AAKVVVMDCTERQYTVVILRCRDRPKLLFDTLCALNDLQYVVFHGTVDAEGASKEAYQEY 313
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELEL--CTEDRVGLLSDITRIFREN 353
YIRHVDG P+ ++AER R+++CLEAA+ERRAS GLELEL TEDRVGLLS+ITR+FREN
Sbjct: 314 YIRHVDGHPVRADAERTRLVRCLEAAVERRASNGLELELEVRTEDRVGLLSEITRVFREN 373
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP-KP 412
SLSI RA I+T GK +DTFYV+D GNPVD + ID++ Q+GH L+VKR A K
Sbjct: 374 SLSIIRAAITTKDGKAEDTFYVSDTYGNPVDGRTIDAVGEQLGHAVLRVKRRGHDASVKH 433
Query: 413 PKETTTGFFLGNFFKARTFQTFKLIRSYS 441
E LG+ K +FQ +LIRSYS
Sbjct: 434 EAEGGAVSVLGSLLKG-SFQGLRLIRSYS 461
>gi|357502937|ref|XP_003621757.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
gi|355496772|gb|AES77975.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
Length = 451
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/431 (56%), Positives = 312/431 (72%), Gaps = 4/431 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + T+IKVDS NK G LL+V+QVL D+NL++++AYI
Sbjct: 10 LDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVF+V D +GKKI ++V D IQQ L S+R SVGV EHT+IE
Sbjct: 70 SSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV A+LADL CNVV AE+WTHN R A+VV++TD +TG I +P RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLAKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K LL VLRG D + A T++S +++RRLHQ+M+ DRDY+ + + ++
Sbjct: 190 KHLLLYVLRGDIDKKNANTAVSFCS-THKDRRLHQLMYADRDYDIYDGDYSCSTNDRNKL 248
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + I+K YTV+ +R DRPKLLFD VCT+TDMQYVV+HG VN EAYQE+YIRH
Sbjct: 249 NVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYYIRH 308
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
VDG PISSEAER+RVI CLEAA+ RR SEG++LEL EDRVGLLSD+TRIFREN LS+ R
Sbjct: 309 VDGYPISSEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRIFRENGLSVCR 368
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T G + + FYVTDV+GNPV + I+++R++IG T L+VK L K P +
Sbjct: 369 AEVTTRGSQAMNVFYVTDVSGNPVKSETIEAVRKEIGLTILRVKDDPCL--KSPTRESGK 426
Query: 420 FFLGNFFKART 430
F L + ++R+
Sbjct: 427 FSLRDLVRSRS 437
>gi|414871684|tpg|DAA50241.1| TPA: hypothetical protein ZEAMMB73_737306 [Zea mays]
Length = 442
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/441 (55%), Positives = 314/441 (71%), Gaps = 16/441 (3%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
++ +LI R R+VIDN + A+AT+++VDS N++GILL+VIQV+ D+NLVI KAYI+SD
Sbjct: 12 QFWRLIGR----RIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYITSD 67
Query: 64 GGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI 119
GGWFMDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H I
Sbjct: 68 GGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNII 127
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E TGTDRPGL SEV AVL L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL
Sbjct: 128 ELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLER 187
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 239
I+E L + RG + R A S S + ERRLHQ+M DD DYE++++ + +S R
Sbjct: 188 IREKLSYLFRGGNLSRGATVS-SRTATTHTERRLHQMMLDDGDYEQLQR---QAPGQSQR 243
Query: 240 PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VTV N +KDY+V+T+R KDR KLLFD VCTLTD+QYVVFH ++ +AYQEFY+R
Sbjct: 244 PNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVR 303
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
HV+G P+++E ER RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL++
Sbjct: 304 HVNGSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVT 363
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP-PKETT 417
RAE++T G +TFYV G VD K IDSIR IGH+ LQVK P+P KE+
Sbjct: 364 RAEVTTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVK-GQAEPPEPQKKESP 421
Query: 418 TGFFLGNFFKARTFQTFKLIR 438
T F N F+ R+ +F +R
Sbjct: 422 TWFLFANLFRPRSLYSFGFMR 442
>gi|224053525|ref|XP_002297856.1| predicted protein [Populus trichocarpa]
gi|118487724|gb|ABK95686.1| unknown [Populus trichocarpa]
gi|222845114|gb|EEE82661.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/444 (54%), Positives = 314/444 (70%), Gaps = 9/444 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDE+ KL+ RMNPPRV +DN + AT+IKVDS NK G LL+V+QVL D+NL+I++AYIS
Sbjct: 10 DDEFEKLVIRMNPPRVTVDNASSRKATLIKVDSANKRGSLLEVVQVLTDLNLIIRRAYIS 69
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFMDVF V D G K+ + +V + IQQ L SLR SVGV E+T+IE
Sbjct: 70 SDGEWFMDVFYVTDQHGNKLSEDDVAERIQQSLGPRGRSFRSLRRSVGVQAAAENTTIEL 129
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TG DRPGL SE+ A+L DL CNVV +E+WTHN R A+VV++TD +TG I DP RL+ IK
Sbjct: 130 TGRDRPGLLSEIFAILTDLKCNVVASEVWTHNSRMASVVYITDEATGLPIDDPDRLTKIK 189
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
+LL VL+G D R A T++S ++ERRLHQ+M+ DRDY+ + G ++ +P
Sbjct: 190 QLLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMDDADFGSASER--KPF 246
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VT+ N ++K YT++ +R DRPKLLFD VCTLTDMQYVV+HG + EA QE++IRH+
Sbjct: 247 VTLENCVDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEACQEYFIRHM 306
Query: 301 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 360
DG P+SSEAER+RVI CLEAAI RR SEG+ LELC+EDRVGLLSD+TRIFREN LS+ RA
Sbjct: 307 DGSPVSSEAERQRVINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRENGLSVTRA 366
Query: 361 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGF 420
E++T G + + FYVTD +G PV + I+++R++IG T L V + PP+E F
Sbjct: 367 EVTTRGSQAVNVFYVTDSSGYPVKNETIEAVRKEIGLTILHVNDDA-HSKSPPQERGL-F 424
Query: 421 FLGNFFKART---FQTFKLIRSYS 441
LGN F++R+ LIRSYS
Sbjct: 425 SLGNIFRSRSEKFLYNLGLIRSYS 448
>gi|297742666|emb|CBI34815.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/448 (54%), Positives = 311/448 (69%), Gaps = 23/448 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVV+DN CA T++KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 7 DEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 66
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI+YI+Q L +RS+ T++E T
Sbjct: 67 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSL----GCIHHVRSN----SFNGLTALELT 118
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL CNVV +++WTHN R A++++V D +G I+D +++ I+
Sbjct: 119 GTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEG 178
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER + S P V
Sbjct: 179 RLRNVLKGDNDIRSAKTSVSL-AVTHTERRLHQMMFADRDYEREPI----IRSASESPAV 233
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ KDR KLLFD+VCTLTDMQYVVFH +NT +AY EFYIRH D
Sbjct: 234 TVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTD 293
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSEAER+RVIQCL+AAIERRASEG+ LELCTEDR GLL+D+TR FREN L++ RAE
Sbjct: 294 GSPISSEAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAE 353
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK--ETTTG 419
IST + FYVTD GNP DPKII+++R++IG + L+VK ++ + + E T G
Sbjct: 354 ISTTSEIALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAERDEPTVG 413
Query: 420 ------FFLGNFFKARTFQTFKLIRSYS 441
LG+ + R LIRS+S
Sbjct: 414 VGGAVLLSLGSLVR-RNLYNLGLIRSHS 440
>gi|224030455|gb|ACN34303.1| unknown [Zea mays]
Length = 437
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/436 (55%), Positives = 307/436 (70%), Gaps = 19/436 (4%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
RVVIDN++C +ATVI+VD VNKHGILL+ +QVL D+NLVI KAYISSDG WFM VFNV D
Sbjct: 11 RVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDGNWFMHVFNVTD 70
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG DRPGL SEVCA
Sbjct: 71 QDGSKLHNREVIDHIQKCLESDGYLVPPANGYA--LPEDQFTSIELTGADRPGLLSEVCA 128
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195
VLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL +V+RG
Sbjct: 129 VLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRDVMRGDGTCN 188
Query: 196 KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS----SRPQVTVLNI-EKD 250
+ T +S ERRLH +M D E+A G ++ +RP+V V++ E+
Sbjct: 189 RGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARPKVVVMDCAERR 242
Query: 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN----TGRTEAYQEFYIRHVDGLPIS 306
YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ + EAYQE+YIRHVDG P+
Sbjct: 243 YTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYIRHVDGHPVR 302
Query: 307 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 366
S+AER R+++CLEAA+ERRAS GLELE+ TEDRVGLLS+ITR+FRENSLSI RA I+T
Sbjct: 303 SDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSLSIIRAAITTRD 362
Query: 367 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP-KPPKETTTGFFLGNF 425
GK +DTFYV+D GNPVD + +D++ Q+GH L+VKR AP K E LG+
Sbjct: 363 GKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEAEGGAVSVLGSL 422
Query: 426 FKARTFQTFKLIRSYS 441
K+ +FQ +LIRSYS
Sbjct: 423 LKS-SFQGLRLIRSYS 437
>gi|225426651|ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242743 [Vitis vinifera]
gi|147794108|emb|CAN62364.1| hypothetical protein VITISV_031924 [Vitis vinifera]
Length = 444
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/448 (54%), Positives = 311/448 (69%), Gaps = 23/448 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVV+DN CA T++KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 11 DEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 70
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI+YI+Q L +RS+ T++E T
Sbjct: 71 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSL----GCIHHVRSN----SFNGLTALELT 122
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL CNVV +++WTHN R A++++V D +G I+D +++ I+
Sbjct: 123 GTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEG 182
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER + S P V
Sbjct: 183 RLRNVLKGDNDIRSAKTSVSL-AVTHTERRLHQMMFADRDYEREPI----IRSASESPAV 237
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ KDR KLLFD+VCTLTDMQYVVFH +NT +AY EFYIRH D
Sbjct: 238 TVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTD 297
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSEAER+RVIQCL+AAIERRASEG+ LELCTEDR GLL+D+TR FREN L++ RAE
Sbjct: 298 GSPISSEAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAE 357
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK--ETTTG 419
IST + FYVTD GNP DPKII+++R++IG + L+VK ++ + + E T G
Sbjct: 358 ISTTSEIALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAERDEPTVG 417
Query: 420 ------FFLGNFFKARTFQTFKLIRSYS 441
LG+ + R LIRS+S
Sbjct: 418 VGGAVLLSLGSLVR-RNLYNLGLIRSHS 444
>gi|356502450|ref|XP_003520032.1| PREDICTED: uncharacterized protein LOC100798999 [Glycine max]
Length = 556
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/433 (56%), Positives = 311/433 (71%), Gaps = 8/433 (1%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+P V +DN + TVIKVDS NK G LL+V+QVL D+NL +++AYISSDG WFMDVF+
Sbjct: 128 DPVLVAVDNISSRTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFH 187
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
V D +GKK +V D IQQ L AS SLR SVGV EHT+IE TG DRPGL SE
Sbjct: 188 VTDPNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSE 247
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
V AVLADL CNVV AE+WTHN R A+VV++TD +TG +I DP RL+ IK+LL VL+G
Sbjct: 248 VFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDI 307
Query: 193 DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDY 251
D + A T++S G +++RRLHQ+M+ DRDY+ + G D++ + VTV + I+K Y
Sbjct: 308 DKKSANTAVSV-GSTHKDRRLHQLMYADRDYDVDDGDSGSTSDRN-KLLVTVDDCIDKGY 365
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 311
TV+ +R DRPKLLFD VCTLTDMQYVV+HG V EAYQE+YIRHVDG PISSEAER
Sbjct: 366 TVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAER 425
Query: 312 ERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKD 371
+RVI CLEAAI RR SEG++LELC EDRVGLLSD+TRIFREN LS+ RAE++T G + +
Sbjct: 426 QRVIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRGTQAMN 485
Query: 372 TFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKART- 430
FYVTDV+GNPV+ + I+++R++IG T L VK + KPP + + F L N F++ +
Sbjct: 486 VFYVTDVSGNPVNSETIEAVRKEIGLTILHVKDD--VCSKPPPQESGKFSLSNLFRSSSE 543
Query: 431 --FQTFKLIRSYS 441
L++SYS
Sbjct: 544 KFLYNLGLMKSYS 556
>gi|224082380|ref|XP_002306671.1| predicted protein [Populus trichocarpa]
gi|222856120|gb|EEE93667.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/434 (54%), Positives = 307/434 (70%), Gaps = 8/434 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D+T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCSDSTLIKVDSMNKPGILLEVVQILTDLDLIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS--VGVMPTEEHTS 118
SSDGGWFMDVF+V D GKKI D + IDYI++ L + S VGV +HT+
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKIADLKTIDYIEKALGPKGQEEVTTWSGKPVGVHSVGDHTA 128
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE TG DRPGL SE+ AVLA+LH NVV AE+WTHN R A VV+V D +T A+ DP RLS
Sbjct: 129 IELTGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVVYVNDDTTSRAVDDPTRLS 188
Query: 179 TIKELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+++ L N+LRG DD K +TS S G + +RRLHQ++F DRDYE A + S
Sbjct: 189 AMEDQLKNILRGCDDDEKEGRTSFSM-GFTHVDRRLHQMLFADRDYEGGIVATEIHDPPS 247
Query: 238 SRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
+P++TV + E K Y+V+T+R KDR KL+FDIVCTLTDMQYVVFH +++ A QE+Y
Sbjct: 248 FKPKITVEHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPHASQEYY 307
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
IRH+DG + +E E++RVI+CLEAAI RR SEGL LELC +DRVGLLS++TRI REN LS
Sbjct: 308 IRHMDGCVLDTEGEKDRVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRILRENGLS 367
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKRSTILAPKPPKE 415
+ RA + TIG + + FYV D +GNPVD KII+++RR+IGHT L VK+ + + +P
Sbjct: 368 VSRAGVMTIGEQAMNVFYVRDASGNPVDMKIIEALRREIGHTMMLNVKKPPVSSREPEAR 427
Query: 416 --TTTGFFLGNFFK 427
T FF GN +
Sbjct: 428 GWAKTSFFFGNLLE 441
>gi|302818108|ref|XP_002990728.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
gi|300141466|gb|EFJ08177.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
Length = 466
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/460 (51%), Positives = 307/460 (66%), Gaps = 21/460 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y LI R+N P VVIDN++C DAT++KVDS NKHGILL+V+QVL D++L I KAYI
Sbjct: 9 FDPDYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+RD+ +IDYIQQ L T + SL +VG + H
Sbjct: 69 SSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE +G DRPGL SE+ VL + CNVV AE+WTHN R A VV+VTD +TG IKDP++
Sbjct: 129 TAIELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEK 188
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--RVEKAVGRVE 234
L+ +KE L VLRG D+ R A T S G+ + ERRLHQ+M DRDY+ ++ V
Sbjct: 189 LARMKEQLSQVLRGDDENRLATTDFSS-GLTHTERRLHQMMLADRDYDVPSSTSSINAVL 247
Query: 235 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D RP +++ N +EK Y+V++++ KDRPKLLFD VCTLTDM+YVVFH AYQ
Sbjct: 248 DARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQ 307
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
E+YIRH+DG + +AE+ERV++CLEAAIERR SEGL LELCT DRVGLLSD+TR+FRE
Sbjct: 308 EYYIRHMDGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREK 367
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRST------- 406
LS+ RA++ST G + + FYVTD +G V K+++++R +IG L+VK
Sbjct: 368 GLSVTRADVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVKEEVKEGRGEG 427
Query: 407 -----ILAPKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
+ + F GN + R F L++SYS
Sbjct: 428 AAEVAAEVAAAGGMSRSRFSFGNLSE-RFFHGLGLVKSYS 466
>gi|302810022|ref|XP_002986703.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
gi|300145591|gb|EFJ12266.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
Length = 466
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/460 (51%), Positives = 307/460 (66%), Gaps = 21/460 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y LI R+N P VVIDN++C DAT++KVDS NKHGILL+V+QVL D++L I KAYI
Sbjct: 9 FDPDYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+RD+ +IDYIQQ L T + SL +VG + H
Sbjct: 69 SSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE +G DRPGL SE+ VL + CNVV AE+WTHN R A VV+VTD +TG IKDP++
Sbjct: 129 TAIELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEK 188
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--RVEKAVGRVE 234
L+ +KE L VLRG D+ R A T S G+ + ERRLHQ+M DRDY+ ++ V
Sbjct: 189 LARMKERLSQVLRGDDENRLATTDFSS-GLTHTERRLHQMMLADRDYDVPSSTSSINAVL 247
Query: 235 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D RP +++ N +EK Y+V++++ KDRPKLLFD VCTLTDM+YVVFH AYQ
Sbjct: 248 DARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQ 307
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
E+YIRH+DG + +AE+ERV++CLEAAIERR SEGL LELCT DRVGLLSD+TR+FRE
Sbjct: 308 EYYIRHMDGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREK 367
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRST------- 406
LS+ RA++ST G + + FYVTD +G V K+++++R +IG L+VK
Sbjct: 368 GLSVTRADVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVKEEVKEGRGEG 427
Query: 407 -----ILAPKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
+ + F GN + R F L++SYS
Sbjct: 428 AAEVAAEVAAAGGMSRSRFSFGNLSE-RFFHGLGLVKSYS 466
>gi|224066763|ref|XP_002302203.1| predicted protein [Populus trichocarpa]
gi|222843929|gb|EEE81476.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/433 (52%), Positives = 300/433 (69%), Gaps = 7/433 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C D+T++KVDS+NK GILL+V+QVL D++L+I KAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCNDSTLVKVDSMNKPGILLEVVQVLTDLDLIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVF+V D GKKI D + IDYI++ L ++ VGV HT+
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDIKTIDYIEKALGPKSQEEVTTWADKRVGVHSVGGHTA 128
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ AVLA+LH NVV AE+WTHN R A VV+V D +T A+ DP RLS
Sbjct: 129 IELIGKDRPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVVYVNDDTTSRAVADPTRLS 188
Query: 179 TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
+++ L N+LRG ++ +TS S G + +RRLHQ++F DRDYE A S
Sbjct: 189 IMEDQLKNILRGCENDEAGRTSFSM-GFTHVDRRLHQMLFADRDYEGGIVATEVDYPPSI 247
Query: 239 RPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+P++TV E K Y+V+T+R KDR KL+FDIVCTLTDMQYVVFH +++ A QE+YI
Sbjct: 248 KPKITVERCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYYI 307
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 357
RH+DG + +E E+ERVI+CLEAAI RR SEGL LELC +DRVGLLS++TRI REN L++
Sbjct: 308 RHMDGCVLDTEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRILRENGLAV 367
Query: 358 KRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE-- 415
RA + TIG + + FYV D +GNPVD KII+++R++IGHT + + T + + P+
Sbjct: 368 SRAGVMTIGEQATNVFYVRDASGNPVDTKIIEALRKEIGHTMMLNVKKTPASSREPEARG 427
Query: 416 -TTTGFFLGNFFK 427
T FF GN +
Sbjct: 428 WAKTSFFFGNLLE 440
>gi|224124920|ref|XP_002329846.1| predicted protein [Populus trichocarpa]
gi|222871083|gb|EEF08214.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/449 (53%), Positives = 307/449 (68%), Gaps = 24/449 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM PRVVIDN + ATV+KVDS KH ILL+ +QVL D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNAVSSKATVVKVDSARKHRILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI+YI+Q L T P + + T++E T
Sbjct: 68 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGT---IHPGKTTGSNGL-----TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV+A++WTHN R A++++V D ++G I+D + + I+
Sbjct: 120 GTDRIGLLSEVFAVLADLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDTQHIDRIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKT +S + + ERRLHQ+MF DRDYER K + ++ P V
Sbjct: 180 RLRNVLKGDNDIRSAKTMVSM-AVTHTERRLHQVMFADRDYER--KPI--LQPSGDSPVV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ KDR KLLFD+VCTLTDM+Y+VFH +NT AY EFYIRH D
Sbjct: 235 TVQNWVERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLEFYIRHTD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSE ER+RVIQCL+AA+ERRASEG+ LELCT DR GLL+D+TR FREN L++ RAE
Sbjct: 295 GTPISSEPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLNVTRAE 354
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR--STILAPKPPKETTTG 419
IST G + FYVTD GNP DPK+I+S+R++IG + L+VK I + +E T
Sbjct: 355 ISTAGDMALNVFYVTDAVGNPADPKLIESVRQKIGVSNLKVKELPPLIYHQEAEREDQTA 414
Query: 420 -------FFLGNFFKARTFQTFKLIRSYS 441
LG+ K + LIRSYS
Sbjct: 415 GVAGTVLLSLGSLVKKNLYH-LGLIRSYS 442
>gi|255537131|ref|XP_002509632.1| amino acid binding protein, putative [Ricinus communis]
gi|223549531|gb|EEF51019.1| amino acid binding protein, putative [Ricinus communis]
Length = 442
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/454 (53%), Positives = 304/454 (66%), Gaps = 34/454 (7%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM PRVVIDN C ATV+KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNGVCPTATVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEH-----T 117
DG WFMDVF+V D +G K+ D+ VI+YI+Q L T + H T
Sbjct: 68 DGRWFMDVFHVTDINGNKLTDESVINYIEQSLGT-------------IHYGRTHDFNGLT 114
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
++E TGTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D + +
Sbjct: 115 ALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQHI 174
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
I+ L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER K + R S
Sbjct: 175 DRIEARLRNVLKGDNDIRSAKTSVSM-AVTHTERRLHQMMFADRDYER--KPILRFSADS 231
Query: 238 SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P VTV N +E+ Y+V+ ++ KDR KLLFD+VCTLTDM+YVVFH +NT +AY EFY
Sbjct: 232 --PVVTVQNWVERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKAYLEFY 289
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
I+H DG PISSE ER+RVIQCL+AA+ERRASEG+ LELCT DR GLL+D+TR FREN L+
Sbjct: 290 IKHTDGTPISSEPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLN 349
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE- 415
+ RAEIST + FYVTD GNP D KII+S+R++IG + L+VK L E
Sbjct: 350 VTRAEISTSTKTATNVFYVTDAIGNPADSKIIESVRQRIGLSNLKVKELPPLMYHQEAER 409
Query: 416 --------TTTGFFLGNFFKARTFQTFKLIRSYS 441
T LG+ + + LIRSYS
Sbjct: 410 EEQGVGVAGTVLLSLGSLVR-KNLYNLGLIRSYS 442
>gi|359492290|ref|XP_003634395.1| PREDICTED: uncharacterized protein LOC100250578 isoform 2 [Vitis
vinifera]
Length = 465
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/436 (52%), Positives = 304/436 (69%), Gaps = 10/436 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 27 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 86
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G KI D ++IDYI++ L +++ VGV +H
Sbjct: 87 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 146
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP R
Sbjct: 147 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 206
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
LS ++E L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE +
Sbjct: 207 LSVMEEQLKNVLRGCEDDDKVARTSFSM-GFTHVDRRLHQMLFADRDYEGGGTTIEADYP 265
Query: 236 KSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S +P++T+ E K Y+ +++ KDRPKL+FDIVCTLTDMQYVVFH +++ A QE
Sbjct: 266 PSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQE 325
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
++IRH+DG + +E E+ERVI+CLEAAI RR SEGL LELC +DRVGLLS++TR+ RE+
Sbjct: 326 YFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREHG 385
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKR--STILAPK 411
LS+ RA +ST+G + + FYV D +G PVD K I+++R++IGHT L VK+ S+ P+
Sbjct: 386 LSVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKEPSSAKTPE 445
Query: 412 PPKETTTGFFLGNFFK 427
T FF G+ F+
Sbjct: 446 ASGWAKTSFFFGSLFE 461
>gi|225457853|ref|XP_002268570.1| PREDICTED: uncharacterized protein LOC100250578 isoform 1 [Vitis
vinifera]
gi|147789965|emb|CAN73861.1| hypothetical protein VITISV_007291 [Vitis vinifera]
Length = 447
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/436 (52%), Positives = 304/436 (69%), Gaps = 10/436 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 9 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G KI D ++IDYI++ L +++ VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP R
Sbjct: 129 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 188
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
LS ++E L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE +
Sbjct: 189 LSVMEEQLKNVLRGCEDDDKVARTSFSM-GFTHVDRRLHQMLFADRDYEGGGTTIEADYP 247
Query: 236 KSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S +P++T+ E K Y+ +++ KDRPKL+FDIVCTLTDMQYVVFH +++ A QE
Sbjct: 248 PSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQE 307
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
++IRH+DG + +E E+ERVI+CLEAAI RR SEGL LELC +DRVGLLS++TR+ RE+
Sbjct: 308 YFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREHG 367
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKR--STILAPK 411
LS+ RA +ST+G + + FYV D +G PVD K I+++R++IGHT L VK+ S+ P+
Sbjct: 368 LSVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKEPSSAKTPE 427
Query: 412 PPKETTTGFFLGNFFK 427
T FF G+ F+
Sbjct: 428 ASGWAKTSFFFGSLFE 443
>gi|302142726|emb|CBI19929.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/436 (52%), Positives = 304/436 (69%), Gaps = 10/436 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 28 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 87
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G KI D ++IDYI++ L +++ VGV +H
Sbjct: 88 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 147
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP R
Sbjct: 148 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 207
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
LS ++E L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE +
Sbjct: 208 LSVMEEQLKNVLRGCEDDDKVARTSFSM-GFTHVDRRLHQMLFADRDYEGGGTTIEADYP 266
Query: 236 KSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
S +P++T+ E K Y+ +++ KDRPKL+FDIVCTLTDMQYVVFH +++ A QE
Sbjct: 267 PSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQE 326
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
++IRH+DG + +E E+ERVI+CLEAAI RR SEGL LELC +DRVGLLS++TR+ RE+
Sbjct: 327 YFIRHMDGCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREHG 386
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKR--STILAPK 411
LS+ RA +ST+G + + FYV D +G PVD K I+++R++IGHT L VK+ S+ P+
Sbjct: 387 LSVTRAGVSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKEPSSAKTPE 446
Query: 412 PPKETTTGFFLGNFFK 427
T FF G+ F+
Sbjct: 447 ASGWAKTSFFFGSLFE 462
>gi|356540171|ref|XP_003538563.1| PREDICTED: Protein-PII uridylyltransferase [Glycine max]
Length = 441
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/402 (56%), Positives = 296/402 (73%), Gaps = 14/402 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KLI RM+ PRVVIDN+ C+ AT++KVDS +HGILL +QVL D+NL IKKAYIS+
Sbjct: 8 DEYEKLIIRMSTPRVVIDNSVCSSATLVKVDSARRHGILLDAVQVLTDLNLSIKKAYISA 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G KI D+ V+ YI+Q L + + + RS+ G+ T++E T
Sbjct: 68 DGKWFMDVFHVTDQNGNKIMDESVLKYIEQSL-GNIHYGRTNRSN-GL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G+DR GL SEV AVLADL C+V +A++WTHN R A++++V D S+G AI+D ++++ I+
Sbjct: 120 GSDRVGLLSEVFAVLADLQCDVADAKVWTHNGRIASLIYVKDCSSGSAIEDSQKINKIEL 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AK S+S +M+ ERRLHQ+MF DRDYER ++ S P V
Sbjct: 180 RLRNVLKGDNDIRSAKMSVSM-AVMHTERRLHQLMFVDRDYERTPI----LKLTSDNPLV 234
Query: 243 TVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E + Y+V+ ++ KDR KLLFDIVC LTDM+YVVFH +NT AY EFYIRH D
Sbjct: 235 TVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTSGDRAYLEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSE ER+RVIQCL+AA+ERRASEG+ LELCTEDR GLL+++ R FREN L++ RAE
Sbjct: 295 GTPISSEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAE 354
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
ISTIG + FYVTD G P D KII+S+R++IG + L+VK
Sbjct: 355 ISTIGNMATNIFYVTDAIGIPADSKIIESVRQKIGLSNLEVK 396
>gi|356497179|ref|XP_003517440.1| PREDICTED: uncharacterized protein LOC100780903 [Glycine max]
Length = 441
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/422 (54%), Positives = 297/422 (70%), Gaps = 14/422 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KLI RMN PRVVIDN+ + AT++KVDS +HGILL ++VL D+NL IKKAYIS+
Sbjct: 8 DEYEKLIIRMNTPRVVIDNSVFSSATLVKVDSARRHGILLDAVEVLADLNLSIKKAYISA 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G KI D+ V+ YI+Q L +L + + T++E T
Sbjct: 68 DGKWFMDVFHVTDQNGNKIIDESVLKYIEQSLGNIHYGRTNLSNGL--------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV +++WTHN R A++++V D S+G AI+D ++++ I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVESKVWTHNGRIASLIYVKDSSSGSAIEDSQKINKIEL 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AK S S +M+ ERRLHQ+MF DRDYER ++ S V
Sbjct: 180 RLRNVLKGDNDIRSAKISFSM-AVMHTERRLHQLMFVDRDYERAPI----LKLTSDNASV 234
Query: 243 TVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E + Y+V+ ++ KDR KLLFDIVC LTDM+YVVFH +NT AY EFYIRH D
Sbjct: 235 TVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYLEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSE ER+RVIQCL+AA+ERRASEG+ LELCTEDR GLL+++ R FREN L++ RAE
Sbjct: 295 GTPISSEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVVRTFRENGLNVTRAE 354
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 421
ISTIG K+ FYVTD GNP D KII+S+R++IG + L+VK ++ + +
Sbjct: 355 ISTIGNMAKNIFYVTDAIGNPADSKIIESVRQKIGLSNLEVKELPLINHQEAEREDQAVG 414
Query: 422 LG 423
+G
Sbjct: 415 MG 416
>gi|224075527|ref|XP_002304667.1| predicted protein [Populus trichocarpa]
gi|222842099|gb|EEE79646.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/445 (53%), Positives = 312/445 (70%), Gaps = 9/445 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE+ KL+ RMNPPRV +DN + AT+I+VDS NK G LL+V+QVL D+NL+I++AYI
Sbjct: 9 MDDEFEKLVIRMNPPRVTVDNASSRTATLIEVDSANKRGSLLEVVQVLTDLNLLIRRAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L SLR SV V EHT+IE
Sbjct: 69 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRGPSFRSLRRSVDVQGAAEHTTIE 128
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVLA L CNVV +EIWTHN R A+VV++TD +TG I DP RL+ I
Sbjct: 129 LTGRDRPGLLSEIFAVLAGLKCNVVASEIWTHNSRMASVVYITDEATGLPIDDPDRLTKI 188
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K+LL +L G D R A T++S G ++ERRLHQ+M+ DRDY+ + +++
Sbjct: 189 KQLLLCILIGDRDKRSANTAVS-VGSTHKERRLHQMMYADRDYDVDDADCSSASERNRF- 246
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV N ++K YTV+ +R DRPKL+FD VCTLTDMQYVV+H ++ EA QE++IRH
Sbjct: 247 -VTVENCVDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEACQEYFIRH 305
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG PI+SEAER+R+I CLEAAI RR SEG+ LELC+EDRVGLLSD+TRIFREN LS+ R
Sbjct: 306 MDGSPINSEAERQRLINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRENGLSVTR 365
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 419
AE++T G + + F+VTD +G+PV + I+++R++IG T L V + PP+E
Sbjct: 366 AEVTTRGSQAVNVFFVTDSSGHPVKSETIEAVRKEIGLTILNVNDDA-YSKSPPQERGL- 423
Query: 420 FFLGNFFKART---FQTFKLIRSYS 441
LGN F++++ LI+S S
Sbjct: 424 LSLGNIFRSKSEKFLYHLGLIKSNS 448
>gi|449459664|ref|XP_004147566.1| PREDICTED: uncharacterized protein LOC101209959 [Cucumis sativus]
gi|449520363|ref|XP_004167203.1| PREDICTED: uncharacterized LOC101209959 [Cucumis sativus]
Length = 448
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/448 (52%), Positives = 307/448 (68%), Gaps = 23/448 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY+KLI RMN PRVVIDN C AT++KVDS +HGILL+ +QVL D+NL I+KAYISS
Sbjct: 15 DEYSKLINRMNTPRVVIDNAVCETATLVKVDSARRHGILLEAVQVLTDLNLSIQKAYISS 74
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI Y++Q L T P+ + + T++E T
Sbjct: 75 DGIWFMDVFHVTDLEGNKLTDEGVISYLEQSLATIHCGKPA--------TSNDLTALELT 126
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+L C+VV A++WTHN R A++++V D ++G IK+ +R+ TI
Sbjct: 127 GTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIKESERIDTIVG 186
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G DD AKTS+S + + ERRLHQ+MF DRDYER K V + + S P V
Sbjct: 187 RLRNVLKGDDDILYAKTSVSMT-VTHTERRLHQMMFADRDYER--KPVQQHTEDS--PVV 241
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ KDR KLLFD++CT+TDM YVVFHG + T R AY EFYIRH D
Sbjct: 242 TVQNLVERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTITTSRHRAYLEFYIRHTD 301
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSEAER+RVIQCL+A+IERR S G+ LELCT DR LL+D+TR FREN L++ RAE
Sbjct: 302 GTPISSEAERQRVIQCLQASIERRTSRGVRLELCTTDRPCLLADVTRTFRENGLNVTRAE 361
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP----KETT 417
+ST + FYVTD G+ D K+IDS+R +IG + L+VK +++ + + +
Sbjct: 362 VSTSQEVALNLFYVTDGHGSAADTKMIDSVREKIGMSNLKVKELPLVSQQKTEGEEQAAS 421
Query: 418 TG----FFLGNFFKARTFQTFKLIRSYS 441
G LG+ + R LIRSYS
Sbjct: 422 VGGAVLLSLGSILR-RNLYNLGLIRSYS 448
>gi|224074729|ref|XP_002304443.1| predicted protein [Populus trichocarpa]
gi|222841875|gb|EEE79422.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/449 (53%), Positives = 300/449 (66%), Gaps = 24/449 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM PRVVIDN C ATV+KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNAVCPKATVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ DK VI+YI+Q L T + S G+ T++E T
Sbjct: 68 DGRWFMDVFHVTDLNGNKLTDKSVINYIEQSLVTIHYGRKT--GSNGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL CNVV+A++WTHN R AA++ V D ++G I+D +++ I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDTQQIDRIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKT +S + + ERRLHQ+MF DRDYER ++ P V
Sbjct: 180 RLRNVLKGDNDIRSAKTMVSM-AVTHTERRLHQMMFADRDYERNPI----LQPSGDSPVV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N +E+ Y+V+ ++ +DR KLLFD+VCTLTDM+Y+VFH + T AY EFYIRH D
Sbjct: 235 TVQNWVERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLEFYIRHTD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSE ER+RVIQCL+AA+ERR SEG+ LELCT DR LL+D+TR FREN L++ RAE
Sbjct: 295 GTPISSEPERQRVIQCLQAAVERRVSEGVRLELCTLDRQCLLADVTRTFRENGLNVTRAE 354
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE------ 415
IST + FYVTD GN DPK+I+S+R++IG + L+VK L E
Sbjct: 355 ISTTRDMALNVFYVTDAIGNAADPKLIESVRQKIGMSSLKVKELPPLVYHQEAEREDQTA 414
Query: 416 ---TTTGFFLGNFFKARTFQTFKLIRSYS 441
T LG+ K R LIRSYS
Sbjct: 415 GVAGTVLLSLGSLVK-RNLYHLGLIRSYS 442
>gi|255558468|ref|XP_002520259.1| amino acid binding protein, putative [Ricinus communis]
gi|223540478|gb|EEF42045.1| amino acid binding protein, putative [Ricinus communis]
Length = 447
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/436 (51%), Positives = 300/436 (68%), Gaps = 10/436 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C + T+IKVDS+NK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCNECTLIKVDSMNKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMD+F+V D GKKI D + IDYI++ L L++ VGV ++
Sbjct: 69 SSDGGWFMDIFHVTDQQGKKIIDSKTIDYIEKALGPKEYNKDELKTWPGKRVGVHSVGDY 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA+LH NV AE+WTHN R A VV+V D++T + DP R
Sbjct: 129 TAIELIGRDRPGLLSEITAVLANLHFNVAAAEVWTHNRRIACVVYVNDYTTCRPVDDPTR 188
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
LS ++E L N+LRG +D KA + G + +RRLHQ+ F DRDYE VE
Sbjct: 189 LSVMEEQLKNILRGCEDDEKASRTSFSMGFTHIDRRLHQMFFADRDYEG-GGVTNEVEYP 247
Query: 237 SS-RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
SS +P++TV EK Y+V+++ KDR KLLFDIVCTLTDMQYVVFH +++ A QE
Sbjct: 248 SSFKPKITVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSDGPYASQE 307
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
+YIRH+DG + +E E+ERVI+CLEAAI RR EGL LELC +DRVGLLS++TR+ REN
Sbjct: 308 YYIRHMDGCTLDTEGEKERVIKCLEAAIRRRVCEGLSLELCAKDRVGLLSEVTRVLRENG 367
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKRSTILAPKPP 413
LS+ RA ++T+G + + FYV D +GNPVD K I+++R++IGHT L VK++ + A +P
Sbjct: 368 LSVTRAGVTTVGEQAMNVFYVRDSSGNPVDMKTIEALRKEIGHTMMLNVKKTPVSASQPE 427
Query: 414 KE--TTTGFFLGNFFK 427
+ T FF GN +
Sbjct: 428 AKGWAKTSFFFGNLLE 443
>gi|217073154|gb|ACJ84936.1| unknown [Medicago truncatula]
Length = 387
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/379 (59%), Positives = 281/379 (74%), Gaps = 2/379 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + T+IKVDS NK G LL+V+QVL D+NL++++AYI
Sbjct: 10 LDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVF+V D +GKKI ++V D IQQ L S+R SVGV EHT+IE
Sbjct: 70 SSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV A+LADL CNVV AE+WTHN R A+VV++TD +TG I +P RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLTKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
K LL VLRG D + A T++S +++RRLHQ+M+ DRDY+ + + ++
Sbjct: 190 KHLLLYVLRGDIDKKNANTAVSFCS-THKDRRLHQLMYADRDYDIYDGDYSCSTNDRNKL 248
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
VTV + I+K YTV+ +R DRPKLLFD VCT+TDMQYVV+HG VN EAYQE+YIRH
Sbjct: 249 NVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYYIRH 308
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
VDG PISSEAER+RVI CLEAA+ RR SEG++LEL EDRVGLLSD+TRIFREN LS+ R
Sbjct: 309 VDGYPISSEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRIFRENGLSVCR 368
Query: 360 AEISTIGGKVKDTFYVTDV 378
AE++T G + + FYVTDV
Sbjct: 369 AEVTTRGSQAMNVFYVTDV 387
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 240 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P+VTV N + T+I + S ++ L ++V LTDM +V +++ F++
Sbjct: 24 PRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYISSDGGWFMDVFHVT 83
Query: 299 HVDGLPISSEAERERVIQCLEAAIE-----------RRASEGLELELCTEDRVGLLSDIT 347
+G I E +R+ Q L + + A+E +EL DR GLLS++
Sbjct: 84 DQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIELTGRDRPGLLSEVF 143
Query: 348 RIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPVD 384
I + ++ AE+ T ++ Y+T D TG P+D
Sbjct: 144 AILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPID 181
>gi|116781547|gb|ABK22147.1| unknown [Picea sitchensis]
Length = 466
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/457 (52%), Positives = 306/457 (66%), Gaps = 19/457 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L RR+NPP V IDN+TC D T+IKVDS NKHGILL+V+Q+L D++L I KAYI
Sbjct: 9 FDPEYENLERRINPPSVSIDNDTCPDCTLIKVDSANKHGILLEVVQLLTDLDLTISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ-----RLETDASFAPSLRSSVGVMPTEE 115
SSDGGWFMDVF+V D G K+ D+ +I+YIQQ R+ + L VGV E
Sbjct: 69 SSDGGWFMDVFHVTDQLGDKLTDESIIEYIQQSLGAKRVISSREVKTCLGRIVGVQSIGE 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+T+IE TGTDRPGL SE+ AVL CNVV AE WTHN R A VV+VTD S+ I+D
Sbjct: 129 YTAIELTGTDRPGLLSEISAVLTSFSCNVVAAESWTHNMRVACVVYVTDESSNRPIEDEV 188
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVE 234
RLSTIK L NVL+G DD K + G+ +RERRLHQ+MF DRDYE + + +
Sbjct: 189 RLSTIKGQLSNVLKGNDDSTKGVKTDFSMGLTHRERRLHQLMFADRDYECSSDSSNPSLL 248
Query: 235 DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D++ +P +TV N EK Y+V+ ++ +DRPKLLFD VCTLTDMQYVVFH + A Q
Sbjct: 249 DENMKPVITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYVVFHASITCNLPYALQ 308
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
E+YIRH+DG + +E E+ RVI+CLEAAI RRASEGL LEL DR+GLLSD+TR+FREN
Sbjct: 309 EYYIRHMDGCTLDTEGEKHRVIKCLEAAIGRRASEGLSLELSASDRIGLLSDVTRMFREN 368
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDV-TGN---PVDPKIIDSIRRQIGHTK-LQVKR--ST 406
LS+ RA+++T G K + FYV D +GN +D K+++++RR+IGHT LQVK
Sbjct: 369 GLSVTRADVTTRGDKAINVFYVRDASSGNLAINIDMKVVEAMRREIGHTMFLQVKNMPGD 428
Query: 407 ILAPKPPKETTTG--FFLGNFFKA---RTFQTFKLIR 438
I P ++ + F + FKA R F++I+
Sbjct: 429 IAYNSLPIDSRSKFRFSFASLFKAQLDRISYNFRMIK 465
>gi|449528978|ref|XP_004171478.1| PREDICTED: uncharacterized LOC101205369 [Cucumis sativus]
Length = 450
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/455 (52%), Positives = 311/455 (68%), Gaps = 28/455 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS + G LL+ +QVL D+NL IKKAY+SS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSIKKAYVSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G+K+ D+ VI Y++Q L T R + T T++E T
Sbjct: 68 DGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGT-----THYRRNEEFNGTT--TALELT 120
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D +++ TI
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VL+G +D R AKTS+S + + ERRLHQ+MF DRDYER K + ++ +S P V
Sbjct: 181 RLRSVLKGDNDIRSAKTSVSM-AVTHTERRLHQMMFADRDYER--KPILKLNADNS-PAV 236
Query: 243 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD++ TLTDMQYVVFH +NT + AY EFYIRH D
Sbjct: 237 TVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSD 296
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSEAER+RVIQCL+AAI+RRASEG+ LELCTEDR GLL+D+ R FREN L++ RAE
Sbjct: 297 GTPISSEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFRENGLNVTRAE 356
Query: 362 ISTIGGKVKDT-------FYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR--STILAPKP 412
IST ++ T FYVTDV GN D K I+S+R++IG + L+VK ST
Sbjct: 357 ISTTRAEISTTRDMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPSTYHQTTE 416
Query: 413 PKETTTG------FFLGNFFKARTFQTFKLIRSYS 441
+E T G F LG+ + R LIRS S
Sbjct: 417 REEQTFGVGGAVLFTLGSMVR-RNLYNLGLIRSCS 450
>gi|356514172|ref|XP_003525780.1| PREDICTED: uncharacterized protein LOC100802262 [Glycine max]
Length = 441
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/402 (54%), Positives = 293/402 (72%), Gaps = 14/402 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+ AT++KVDS KHGIL+ +QVL+D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ DK V+ YI+Q L + + + + + T +E T
Sbjct: 68 DGRWFMDVFHVTDENGDKLTDKSVLSYIEQSLGSIHNAKTNHSNGL--------TILELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+ C+VV+A++WTHN R A++++V D ++G I+D +R+STI+
Sbjct: 120 GTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS++ +++ ERRLHQ+M+ DRDY+R ++ S P V
Sbjct: 180 RLRNVLKGDNDIRNAKTSVTN-AVLHAERRLHQMMYTDRDYQRNPI----LKFASVTPIV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD+VC LTDM+YVVFH + T +AY EFYIRH D
Sbjct: 235 TVQNWAERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYIRHRD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSE ER RVIQCL+AA+ERRA EG+ LELCTEDR GLL+++ R FREN +++ RAE
Sbjct: 295 GTPISSEPERHRVIQCLQAAVERRAYEGVRLELCTEDRQGLLAEVMRTFRENGMNVTRAE 354
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
ISTIG + FYVTD G PVDPKI++S+R+++G + L+VK
Sbjct: 355 ISTIGNMASNVFYVTDAVGYPVDPKIVESVRQKVGLSNLKVK 396
>gi|356509344|ref|XP_003523410.1| PREDICTED: uncharacterized protein LOC100789173 [Glycine max]
Length = 445
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/437 (51%), Positives = 301/437 (68%), Gaps = 14/437 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY RMNPPRV +DN +C D T+IKVDSVNK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENFSNRMNPPRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID+I++ L + +++ VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVKNWPSKRVGVHSVGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA+LH NV AE+WTHN R A V++V D +T A+ + R
Sbjct: 129 TAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVND-ATNQAVDEANR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
LS ++E L N+LRG D + A+TS S G + +RRLHQ++F DRDYE AV R D
Sbjct: 188 LSLMEEQLNNILRGCDGEKVARTSFSM-GSTHMDRRLHQMLFADRDYE--SYAVAREVDS 244
Query: 237 --SSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
S RP++T+ E K Y+V++++ KDR KL+FDIVCTLTDMQYVVFH V++ A Q
Sbjct: 245 PPSLRPKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQ 304
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
E++IRH+DG + ++ E+ERVIQC+EAAI RR SEG+ LELC +DRVGLLS++TRI REN
Sbjct: 305 EYFIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILREN 364
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL-QVKR--STILAP 410
L++ RA +ST G + + FYV D +GNPVD K ++++R++IG T + VKR S AP
Sbjct: 365 GLTVCRAGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVPSNAKAP 424
Query: 411 KPPKETTTGFFLGNFFK 427
+ T FF GN +
Sbjct: 425 ETRGWAKTSFFFGNLLE 441
>gi|18411317|ref|NP_565146.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699222|ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699224|ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|79321337|ref|NP_001031289.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|186495930|ref|NP_001117608.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|13430820|gb|AAK26032.1|AF360322_1 unknown protein [Arabidopsis thaliana]
gi|2829923|gb|AAC00631.1| Similar to uridylyl transferases [Arabidopsis thaliana]
gi|21280959|gb|AAM44939.1| unknown protein [Arabidopsis thaliana]
gi|22138096|gb|AAM93428.1| ACR3 [Arabidopsis thaliana]
gi|222424164|dbj|BAH20041.1| AT1G76990 [Arabidopsis thaliana]
gi|332197796|gb|AEE35917.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197797|gb|AEE35918.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197798|gb|AEE35919.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197799|gb|AEE35920.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197800|gb|AEE35921.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
Length = 453
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/446 (50%), Positives = 305/446 (68%), Gaps = 24/446 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPP V IDN +C + T++KVDS+NK GILL+V+QVL D++L I KAYI
Sbjct: 9 FDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D + IDYI++ L + S + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TSIE DRPGL SEV AVLADL+ NVV AE WTHN R A V++V D++T A+ DP+R
Sbjct: 129 TSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LSTIKELLFNVLRGYD--DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
LS+++E L NVLRG + D + A+TSLS G + +RRLHQ+ F DRDYE AV +++
Sbjct: 189 LSSMEEQLNNVLRGCEEQDEKFARTSLSI-GSTHVDRRLHQMFFADRDYE----AVTKLD 243
Query: 235 DKSS---RPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
D +S P++TV + E K Y+VI + +DRPKL+FDIVCTLTDMQY+VFH +++ +
Sbjct: 244 DSASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSH 303
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIF 350
A QE++IRH DG + +E E+ERV++CLEAAI RR SEG LELC +DRVGLLS++TRI
Sbjct: 304 ASQEYFIRHKDGCTLDTEGEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRIL 363
Query: 351 RENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP 410
RE+ LS+ RA ++T+G + + FYV D +GNPVD K I+++R +IGH+ + ++ + +
Sbjct: 364 REHGLSVSRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKVPSR 423
Query: 411 KPPKETTTG---------FFLGNFFK 427
K +E G FF GN +
Sbjct: 424 KWKEEGQAGTGGGWAKTSFFFGNLLE 449
>gi|356515959|ref|XP_003526664.1| PREDICTED: uncharacterized protein LOC100797293 [Glycine max]
Length = 445
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/437 (51%), Positives = 299/437 (68%), Gaps = 14/437 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY RMNPPRV +DN +C D T+IK+DSVNK GILL+V+Q+L D++ VI KAYI
Sbjct: 9 FDPEYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFVITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID I++ L + +++ VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSKSTEGVKNWPSKHVGVHSVGDY 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA+LH NV AE+WTHN R A V++V D +T DPKR
Sbjct: 129 TAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVND-ATNQVADDPKR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
LS ++E L N+LRG D + A+TS S G + +RRLHQ++F DRDYE AV R D
Sbjct: 188 LSLMEEQLNNILRGCDGEKVARTSFSM-GSTHMDRRLHQMLFADRDYE--SYAVAREVDS 244
Query: 237 --SSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
S RP++T+ E K Y+V++++ KDR KL+FDIVCTLTDMQYVVFH V++ A Q
Sbjct: 245 PPSLRPRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQ 304
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
E++IRH+DG + ++ E+ERVIQC+EAAI RR SEG+ LELC +DRVGLLS++TRI REN
Sbjct: 305 EYFIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILREN 364
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL-QVKR--STILAP 410
LS+ RA +ST G + + FYV D +GNPVD K ++++ ++IG T + VKR S AP
Sbjct: 365 GLSVCRAGVSTRGEQALNVFYVRDASGNPVDMKTMEALCKEIGKTMMVDVKRVPSNTKAP 424
Query: 411 KPPKETTTGFFLGNFFK 427
+ T FF GN +
Sbjct: 425 ETRGWAKTSFFFGNLLE 441
>gi|449460443|ref|XP_004147955.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205369 [Cucumis sativus]
Length = 449
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/454 (52%), Positives = 309/454 (68%), Gaps = 27/454 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS + G LL+ +QVL D+NL IKKAY+SS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSIKKAYVSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G+K+ D+ VI Y++Q L T R + T T++E T
Sbjct: 68 DGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGT-----THYRRNEEFNGTT--TALELT 120
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D +++ TI
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VL+G +D R AKTS+S + + ERRLHQ+MF DRDYER K + ++ +S P V
Sbjct: 181 RLRSVLKGDNDIRSAKTSVSM-AVTHTERRLHQMMFADRDYER--KPILKLNADNS-PAV 236
Query: 243 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD++ TLTDMQYVVFH +NT + AY EFYIRH D
Sbjct: 237 TVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSD 296
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLS------DITRIFRENSL 355
G PISSEAER+RVIQCL+AAI+RRASEG+ LELCTEDR GLL+ D+ R FREN L
Sbjct: 297 GTPISSEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFDVMRTFRENGL 356
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR--STILAPKPP 413
++ RAEIST + FYVTDV GN D K I+S+R++IG + L+VK ST
Sbjct: 357 NVTRAEISTTRHMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPSTYHQTTER 416
Query: 414 KETTTG------FFLGNFFKARTFQTFKLIRSYS 441
+E T G F LG+ + R LIRS S
Sbjct: 417 EEQTFGVGGAVLFTLGSMVR-RNLYNLGLIRSCS 449
>gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
Length = 453
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/446 (50%), Positives = 304/446 (68%), Gaps = 24/446 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPP V IDN +C + T++KVDS+NK GILL+V+QVL D++L I KAYI
Sbjct: 9 FDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D + IDYI++ L + S + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TSIE DRPGL SEV AVLADL+ NVV AE WTHN R A V++V D++T A+ DP+R
Sbjct: 129 TSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LSTIKELLFNVLRGYD--DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
LS+++E L NVLRG + D + A+TSLS G + +RRLHQ+ F DRDYE AV +++
Sbjct: 189 LSSMEEQLNNVLRGCEEQDEKFARTSLSI-GSTHVDRRLHQMFFADRDYE----AVTKLD 243
Query: 235 DKSS---RPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
D +S P++TV + E K Y+VI + +DRPKL+FDIVCTLTDMQY+VFH +++ +
Sbjct: 244 DSASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSH 303
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIF 350
A QE++IRH DG + +E E+ER ++CLEAAI RR SEG LELC +DRVGLLS++TRI
Sbjct: 304 ASQEYFIRHKDGCTLDTEGEKERXVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRIL 363
Query: 351 RENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP 410
RE+ LS+ RA ++T+G + + FYV D +GNPVD K I+++R +IGH+ + ++ + +
Sbjct: 364 REHGLSVSRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKVPSR 423
Query: 411 KPPKETTTG---------FFLGNFFK 427
K +E G FF GN +
Sbjct: 424 KWKEEGQAGTGGGWAKTSFFFGNLLE 449
>gi|357481871|ref|XP_003611221.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
gi|355512556|gb|AES94179.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
Length = 441
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/448 (50%), Positives = 308/448 (68%), Gaps = 23/448 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+ AT++KV S ++G LL IQVL D+NL+IKKAYISS
Sbjct: 8 DEYEKLLIRMSTPRVVIDNAVCSTATLVKVISARRNGSLLNAIQVLIDLNLLIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V +G KI D+ ++ YI+Q L + + + + + V+ E +
Sbjct: 68 DGKWFMDVFHVTHQNGSKIIDENILKYIEQSLGSTHNVRTNCSNGLTVL--------ELS 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D +G I+D +++ I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKIKKIEV 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS+S +M+ ERRLHQ+MF DRDYER ++ S V
Sbjct: 180 RLRNVLKGDNDIRSAKTSVSMS-VMHSERRLHQMMFADRDYERTPI----LKLTSDNTLV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD+VC LTDM+YVVFH +NT +AY EFYIRH D
Sbjct: 235 TVQNWAERGYSVVNIQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSE ER+RVIQCL+A++ERRASEG++L+LCTED+ GLL+++ R FREN L++ RAE
Sbjct: 295 GTPISSEPERQRVIQCLKASVERRASEGVQLKLCTEDKQGLLAEVMRTFRENGLNVTRAE 354
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP--KETTTG 419
IST+ + FYVTDVTG P DP I+S+R++IG + L+VK ++ + ++ T G
Sbjct: 355 ISTLENMATNVFYVTDVTGKPADPTTIESVRQKIGSSNLEVKELPLIYHQKTEREDQTVG 414
Query: 420 ------FFLGNFFKARTFQTFKLIRSYS 441
+F+G+ + R + LI+S S
Sbjct: 415 IGGAVLWFIGSLVR-RNLYSLGLIKSCS 441
>gi|356563282|ref|XP_003549893.1| PREDICTED: uncharacterized protein LOC100794729 [Glycine max]
Length = 441
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/448 (50%), Positives = 307/448 (68%), Gaps = 23/448 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+ AT++KVDS KHGIL+ +QVL+D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ V+ YI+Q L + + S + + T +E T
Sbjct: 68 DGRWFMDVFHVTDQNGNKLTDESVLSYIEQSLGSIHNGKTSHSNGL--------TILELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+ C+VV+A++WTHN R A++++V D ++ I+D +R+STI+
Sbjct: 120 GTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSETPIEDSQRISTIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L NVL+G +D R AKTS++ +++ ERRLHQ+M+ DRDY+R + + S P V
Sbjct: 180 RLRNVLKGDNDIRNAKTSVTN-AVLHAERRLHQMMYTDRDYQR--NPIFKF--SSDTPIV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD+VC LT+M+YVVFH + T +AY EFYIRH D
Sbjct: 235 TVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTEMEYVVFHATIKTTIDQAYLEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSE ER RVIQCL+AA+ERRA EG+ LELCTEDR GLL+++ R FREN L++ RAE
Sbjct: 295 GTPISSEPERHRVIQCLQAAVERRAFEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAE 354
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTIL----APKPPKETT 417
ISTIG + FYVTD G P DPKI++S+R+++G + L+VK ++ A + +
Sbjct: 355 ISTIGDMASNVFYVTDAIGYPADPKIVESVRQKVGLSNLKVKELPLVCHEKAEREDQPVG 414
Query: 418 TG----FFLGNFFKARTFQTFKLIRSYS 441
G LG+ + R LI+S S
Sbjct: 415 VGGAVLLCLGSLVR-RNLYNLGLIKSCS 441
>gi|302809521|ref|XP_002986453.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
gi|300145636|gb|EFJ12310.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
Length = 452
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/441 (51%), Positives = 297/441 (67%), Gaps = 17/441 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIK-----VDSVNKHGILLQVIQVLNDVNLVI 55
D EY L R++PP VVIDN +C DAT+IK VDS NKHGILL+V+QVL D++L I
Sbjct: 3 FDPEYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAI 62
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVG----V 110
KAYISSDGGWFMDVF+V D G K+ D+ +IDYIQQ L S +++ +G +
Sbjct: 63 SKAYISSDGGWFMDVFHVTDQLGNKLIDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRFSL 122
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E T+IE G DRPGL S++ VL D+ CNVV AE+WTHN R A VV+VTD TG
Sbjct: 123 RSNTEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGP 182
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
I+D K+L+ IK L L+G + + +KT + P +++ ERRLHQIM D + E
Sbjct: 183 IEDEKKLAVIKARLSQALQGDESGKGSKTDI-PMAVLHTERRLHQIMSADFAAIQPESTN 241
Query: 231 GRVE--DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
V DK+ RP ++V N EK Y+V+ +R KDRPKLLFD VCTLTDM+YVVFH + +
Sbjct: 242 TFVAAADKT-RPAISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHAAIRSE 300
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDIT 347
+ AYQE+YIR +DG + SEAE+E V++CLEAAIERR G+ LELCT+DRVGLLSD+T
Sbjct: 301 GSFAYQEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGLLSDVT 360
Query: 348 RIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTI 407
RIFREN LS+ RA++ST G K + FYVTD +GNPVD +I+++ R++IG + LQVK T
Sbjct: 361 RIFRENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQVKDLTP 420
Query: 408 LAPKPPKETTTG--FFLGNFF 426
+P E + F G F
Sbjct: 421 SSPNSQHEVASKSRFSFGTFL 441
>gi|302784474|ref|XP_002974009.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
gi|302803458|ref|XP_002983482.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300148725|gb|EFJ15383.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300158341|gb|EFJ24964.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
Length = 477
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/469 (48%), Positives = 308/469 (65%), Gaps = 33/469 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRVVIDN AT+IK+DS N+HGILL V+QVL D++L I KA+I
Sbjct: 14 FDPEYETLAARINPPRVVIDNKVSEHATIIKLDSSNRHGILLDVVQVLTDLDLSILKAFI 73
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVF+V D DG K+ D++VI +I+ + A S ++GV EHT+IE
Sbjct: 74 SSDGGWFMDVFHVTDRDGNKLSDEKVIAHIEHKGVCQAYRTCSGARTIGVQSLAEHTAIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH-STGYAIKDPKRLST 179
TG DRPGL SE+ AVLA L CNVV AE+WTHN R A +V+VTDH G +KDP +L
Sbjct: 134 LTGNDRPGLLSEISAVLASLGCNVVAAEVWTHNTRVACMVYVTDHEGHGGPVKDPTKLCH 193
Query: 180 IKELLFNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER-----------VE 227
IK++L V++G D + A+T + G+ + ERRLHQ+M D++ E
Sbjct: 194 IKQMLGQVMKGDSLDGKTARTDFA-MGLTHTERRLHQMMSADKEEEMEVAEEEAALSPAP 252
Query: 228 KAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 286
++ D RP VTV N +EK Y+V+T++ DRPKLLFD VCTLTDM+YVVFH +++
Sbjct: 253 TSISDSVDYKGRPTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATIDS 312
Query: 287 GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDI 346
A+QE+YIRH+DG +++E ER+RV++CLEAAI RRAS+G+ LEL T+DR+GLLSD+
Sbjct: 313 EGPNAFQEYYIRHLDGYTLNTETERQRVVRCLEAAILRRASQGVRLELSTQDRIGLLSDV 372
Query: 347 TRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRST 406
TRIFREN LS+ RAE++T + FYVTD G VD +++++IR ++G L+V +
Sbjct: 373 TRIFRENGLSVARAEVTTRDDMAVNVFYVTDANGGSVDMRVVEAIREEVGLAILKVTQER 432
Query: 407 ILAPKPPK-----------ETTTGFFLGNFFKA---RTFQTFKLIRSYS 441
PPK ++ F LG+FF++ R T L++SY+
Sbjct: 433 F----PPKMLHSSPTESADKSAARFSLGSFFRSHSERLLYTLGLLKSYT 477
>gi|302794344|ref|XP_002978936.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
gi|300153254|gb|EFJ19893.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
Length = 452
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/441 (51%), Positives = 292/441 (66%), Gaps = 17/441 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIK-----VDSVNKHGILLQVIQVLNDVNLVI 55
D EY L R++PP VVIDN +C DAT+IK VDS NKHGILL+V+QVL D++L I
Sbjct: 3 FDPEYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAI 62
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVGV 110
KAYISSDGGWFMDVF+V D G K+ D+ +IDYIQQ L L V +
Sbjct: 63 SKAYISSDGGWFMDVFHVTDQLGNKLTDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRVSL 122
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E T+IE G DRPGL S++ VL D+ CNVV AE+WTHN R A VV+VTD TG
Sbjct: 123 RSNTEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGP 182
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
I+D K+L+ IK L L+G + + +KT + P +++ ERRLHQIM D + E
Sbjct: 183 IEDEKKLAVIKARLSQALQGDESGKGSKTDI-PMAVLHTERRLHQIMSADFAAIQPESTN 241
Query: 231 GRVE--DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
V DK+ RP ++V N EK Y+V+ +R DRPKLLFD VCTLTDM+YVVFH + +
Sbjct: 242 TFVAAADKT-RPAISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHAAIRSE 300
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDIT 347
+ AYQE+YIR +DG + SEAE+E V++CLEAAIERR G+ LELCT+DRVGLLSD+T
Sbjct: 301 GSFAYQEYYIRLMDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGLLSDVT 360
Query: 348 RIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTI 407
RIFREN LS+ RA++ST G K + FYVTD +GNPVD +I+++ R++IG + LQVK T
Sbjct: 361 RIFRENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQVKDLTP 420
Query: 408 LAPKPPKETTTG--FFLGNFF 426
+P E + F G F
Sbjct: 421 SSPNSQHEVASKSRFSFGTFL 441
>gi|356546978|ref|XP_003541896.1| PREDICTED: uncharacterized protein LOC100797658 [Glycine max]
Length = 449
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/439 (50%), Positives = 298/439 (67%), Gaps = 14/439 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY R+NPPRV +DN++C D T+IK DS+NK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID+I++ L ++S VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRVGVHSIGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ AVLA L NV+ AE+WTHN R A V++V D +T A+ D KR
Sbjct: 129 TVIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVND-ATNQAMDDSKR 187
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
LS I+E L ++LRG DD + A+TS S GI + +RRLHQ++F DRDYE V+
Sbjct: 188 LSIIEEQLNHILRGCEDDEKVARTSFSM-GITHMDRRLHQMLFADRDYESAGVTTTDVDC 246
Query: 236 KSS-RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
RP + + I EK Y+V++++ KDR KL+FDIVCTLTDM+YVVFH +++ A Q
Sbjct: 247 PPCFRPNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQ 306
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
E++IRH+DG + +E E+ER I+C+EAAI+RR SEG+ LELC +DRVGLLS++TRI REN
Sbjct: 307 EYFIRHMDGCTLDTEGEKERAIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILREN 366
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL-QVKRSTILAPKP 412
L++ RA +ST+G K + FYV D +GNPVD KII+++ ++IG T + VKR K
Sbjct: 367 GLTVSRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQTVMVNVKRIPAAYAKA 426
Query: 413 PKET----TTGFFLGNFFK 427
P ET T FF GN +
Sbjct: 427 PVETRGWARTSFFFGNLLE 445
>gi|297839565|ref|XP_002887664.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
gi|297333505|gb|EFH63923.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/446 (50%), Positives = 304/446 (68%), Gaps = 25/446 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPP V IDN +C + T++KVDS+NK GILL+V+QVL D++L I KAYI
Sbjct: 9 FDPEYENLSTRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D + IDYI++ L + S + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TSIE DRPGL SEV A+LADL+ NVV AE WTHN R A V++V D++T A+ DP+R
Sbjct: 129 TSIEIIARDRPGLLSEVSAILADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LSTIKELLFNVLRG--YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
LS ++E L NVLRG +D + A+TSLS G + +RRLHQ+ F D+DYE AV +++
Sbjct: 189 LSAMEEQLNNVLRGCEQEDEKFARTSLS-IGSTHVDRRLHQMFFADKDYE----AVTKLD 243
Query: 235 DKSSR---PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
D +SR P++TV + EK Y+VI + +DRPKL+FDIVCTLTDMQY+VFH +++ +
Sbjct: 244 DFASRGLEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSH 303
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIF 350
A QE++IRH DG + + E+ERV++CLEAAI RR SEG LELC +DRVGLLS++TRI
Sbjct: 304 ASQEYFIRHKDGCTLDT-GEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRIL 362
Query: 351 RENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP 410
RE+ LS+ RA ++T+G + + FYV D +GNPVD K I+++R +IGH+ + ++ + +
Sbjct: 363 REHGLSVSRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKVPSR 422
Query: 411 KPPKETTTG---------FFLGNFFK 427
K +E G FF GN +
Sbjct: 423 KGKEEGQAGTGGGWAKTTFFFGNLLE 448
>gi|356552731|ref|XP_003544716.1| PREDICTED: uncharacterized protein LOC100789044 [Glycine max]
Length = 448
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/438 (50%), Positives = 296/438 (67%), Gaps = 13/438 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY R+NPPRV +DN++C D T+IK DS+NK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID+I++ L + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVNCWQGKRVGVHSIGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA L NV+ AE+WTHN R A V++V D +T A+ D KR
Sbjct: 129 TAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVND-ATNQAMDDSKR 187
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
LS ++E L ++LRG DD + A+TS + G + +RRLHQ++F DRDYE V V+
Sbjct: 188 LSIMEEQLNHILRGCEDDEKVARTSFTM-GFTHMDRRLHQMLFADRDYESVGLTTTDVDC 246
Query: 236 KSS-RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
S RP++ + I EK Y+V+++R KDR KL+FDIVCTLTDM+YVVFH +++ A Q
Sbjct: 247 PPSFRPKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQ 306
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
E++IRH+DG + +E E+ERVI+C+EAAI+RR SEG+ LELC +DRVGLLS++TRI REN
Sbjct: 307 EYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILREN 366
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP 413
L + RA +ST+G K + FYV D +GNPVD KII+++ ++IG + + K P
Sbjct: 367 GLRVSRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQIMMVNVKRVPGYVKAP 426
Query: 414 KET----TTGFFLGNFFK 427
ET T FF GN +
Sbjct: 427 AETRGWAKTSFFFGNLLE 444
>gi|357477003|ref|XP_003608787.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
gi|355509842|gb|AES90984.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
Length = 441
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/402 (52%), Positives = 288/402 (71%), Gaps = 14/402 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+++T++K DS KHGILL+ +Q+L+D+NL IKKAY+SS
Sbjct: 8 DEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFIKKAYVSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ V+ YI+Q L + + + R+ + T++E
Sbjct: 68 DGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIYNGKTNHRNGL--------TALELK 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+L C+VV A++WTHN R A++++V D TG +I+D ++++ ++
Sbjct: 120 GTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRTASLIYVKDSITGTSIEDSQKINRLEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L VL+G D R A TS+S +++ ERRLHQ+MF DRDY+ + + S P V
Sbjct: 180 RLRYVLQGDSDIRSATTSISD-AVIHPERRLHQMMFADRDYQM--NPIFKF--SSETPVV 234
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
TV N E+ Y+V+ ++ KDR KLLFD+VC LTDM+YVVFH +NT +AY EFYIRH D
Sbjct: 235 TVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRVDQAYMEFYIRHKD 294
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PISSE ER+RVIQCL+AA+ERR+ EG+ LELCTEDR GLL+++ R FREN L++ RA+
Sbjct: 295 GTPISSEPERQRVIQCLQAAVERRSCEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAD 354
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
I+T G + FY TD G P D KII+S+R++IG T L+VK
Sbjct: 355 ITTTGDLAANVFYATDAIGYPADQKIIESVRQKIGLTNLKVK 396
>gi|242082077|ref|XP_002445807.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
gi|241942157|gb|EES15302.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
Length = 476
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/459 (49%), Positives = 294/459 (64%), Gaps = 20/459 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV +DN++ AT++KVDSVNK+G LL+V+QVL D+ L I +AYISS
Sbjct: 18 DEYQKLVLRMNPPRVTVDNDSDMTATLVKVDSVNKYGTLLEVVQVLTDLKLTINRAYISS 77
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSI 119
DG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+I
Sbjct: 78 DGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTI 137
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL DL CN+V +E+WTH+ R AA+V+VTD T AI+DP RL T
Sbjct: 138 ELVGRDRPGLLSEVFAVLTDLKCNIVASEVWTHDGRVAALVYVTDADTLGAIEDPARLDT 197
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV---EKAVGRVEDK 236
+K LL +VLRG +KA + PG+ + RRLHQ+M DR R + VG +
Sbjct: 198 VKRLLRHVLRGSSRDKKASRAAISPGVEHAPRRLHQMMQADRTARREVGDGEGVGERGEA 257
Query: 237 SSR----PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
S P V V + E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V +EA
Sbjct: 258 SGAGGGMPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEA 317
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFR 351
YQE+YIRH+D S +R+R+ +CLEAAI+RR +EGL LELC EDRVGLLSD+TRIFR
Sbjct: 318 YQEYYIRHLDDSTGGSGEDRDRLCRCLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRIFR 377
Query: 352 ENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS------ 405
E+ LS+ AE+ T G + + FYV D +G PV +D++R +IG L V+
Sbjct: 378 EHGLSVTHAEVDTRGAQAANVFYVVDASGEPVQGHAVDAVRAEIGEQFLFVREQHDAAAG 437
Query: 406 TILAPKPPKETTTGFFLGNFFKART---FQTFKLIRSYS 441
PK P LGN ++R+ LIRS S
Sbjct: 438 AGAGPKSPVGGGGRRSLGNMIRSRSEKFLYNLGLIRSCS 476
>gi|357487955|ref|XP_003614265.1| ACR4 [Medicago truncatula]
gi|355515600|gb|AES97223.1| ACR4 [Medicago truncatula]
Length = 362
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/350 (60%), Positives = 262/350 (74%), Gaps = 7/350 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN +ATVI+VDS NK GILL+V+Q+L D+NL+I KAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI++ L ++ FA ++R SVGV T +HT+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G+DRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + +RRLHQ+MFDDRDYERV+ D+ RP
Sbjct: 196 KELLCNVLGGGNRKRGAKTVVTDDST-HTDRRLHQMMFDDRDYERVDDDDF---DEKQRP 251
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V V+N +KDY+V+T+ +DRPKL+FD VCTLTDMQYVVFH ++ +AYQE+YI+H
Sbjct: 252 NVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKH 311
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRI 349
+DG P+ S+AER+RVI CLEAAIERR SE +L L D + + S RI
Sbjct: 312 IDGSPVKSDAERQRVIHCLEAAIERRVSEVRDLMLVLSD-ISIASKFGRI 360
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 394
+ ++ G+L ++ +I + +L I +A IS+ GG D F VTD GN V D I+D IR+
Sbjct: 50 SANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKS 109
Query: 395 IG 396
+G
Sbjct: 110 LG 111
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P+V + N ++ TVI + S ++ +L ++V LTD+ ++ +++ F +
Sbjct: 31 PRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT 90
Query: 299 HVDGLPISSEAERERVIQ------CLEAAIE----RRASEGLELELCTEDRVGLLSDITR 348
DG ++ E + + + C + ++ + +EL DR GLLS+++
Sbjct: 91 DQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMGSDRPGLLSEVSA 150
Query: 349 IFRENSLSIKRAEISTIGGKVKDTFYVTD 377
+ +I AE+ T + +VTD
Sbjct: 151 VLTNLKCNIVNAEVWTHNMRAAAVMHVTD 179
>gi|41469088|gb|AAS07062.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708792|gb|ABF96587.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 374
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/378 (56%), Positives = 273/378 (72%), Gaps = 10/378 (2%)
Query: 68 MDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
M VFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T IE TG
Sbjct: 1 MSVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTG 60
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
TDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL+ IKE
Sbjct: 61 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKER 120
Query: 184 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 243
L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V + P V+
Sbjct: 121 LSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---NPTPVVS 176
Query: 244 VLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 302
V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+YIRH+DG
Sbjct: 177 VVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDG 236
Query: 303 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 362
P++SEAER+RVIQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RAE+
Sbjct: 237 SPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEV 296
Query: 363 STIGGKVKDTFYVTDVTG-NPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 421
ST G K +TFYV D G + VD K +++IR++IG T LQVK PP+E+ + F
Sbjct: 297 STRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPSRFL 356
Query: 422 LGNFFKARTFQTFKLIRS 439
+ F+ R+ + LIRS
Sbjct: 357 FSSLFRPRSLYSLGLIRS 374
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 3 DEYAKLIRRMNP-PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
+ Y K +NP P V + N D +V+ + ++ +L + L D+ V+ +
Sbjct: 160 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 219
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
S+G + + DG + + + Q LE A R S G+ +E
Sbjct: 220 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEA----AIERRVSEGL-------KLEL 268
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ DR GL S+V + + V AE+ T D+A +V D + A+ D K L I+
Sbjct: 269 STGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIR 327
Query: 182 ELLFNV---LRGYDDFRKAKTSLSP 203
+ + ++G+ D RK+ SP
Sbjct: 328 QEIGQTVLQVKGHPDHRKSPPQESP 352
>gi|15221327|ref|NP_172704.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
gi|8778647|gb|AAF79655.1|AC025416_29 F5O11.14 [Arabidopsis thaliana]
gi|22138106|gb|AAM93433.1| ACR8 [Arabidopsis thaliana]
gi|110737291|dbj|BAF00592.1| hypothetical protein [Arabidopsis thaliana]
gi|111074504|gb|ABH04625.1| At1g12420 [Arabidopsis thaliana]
gi|332190757|gb|AEE28878.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
Length = 441
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/447 (49%), Positives = 300/447 (67%), Gaps = 21/447 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS ++GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ V+ YI+Q +ET + ++ + G+ T++E T
Sbjct: 68 DGTWNMDVFHVTDLNGNKLNDQSVLRYIEQSIET-VYYGENIEVN-GL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SE+ AVL+DL+C+VV+A++WTHN R A+V+++ D +G I D R+S I+
Sbjct: 120 GTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLKDCISGAPILDSHRISKIEG 179
Query: 183 LLFNVLRGYDDFRKA-KTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L NVL G +D A KT ++ +M+ ERRLHQ+MF+DRDYER K ++S
Sbjct: 180 RLKNVLNGDNDVNSAAKTCVTVDSMMHIERRLHQLMFEDRDYERRSKK----HERSPMVV 235
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
VTV N E+ Y+V+ + +DR KLLFD+VCTLTDM+Y VFH +NT +A+ EFYIRH
Sbjct: 236 VTVQNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIRHK 295
Query: 301 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 360
DG PISSEAER+RVIQCLEAA+ERRA EG+ LEL D+ GLL+++TR FREN L++ R
Sbjct: 296 DGSPISSEAERQRVIQCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVTRT 355
Query: 361 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP----PKET 416
EIST + FYVTD G+ D K+I+S+R +IG L+VK + K ++
Sbjct: 356 EISTSSDMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMYHKKGDGEEQQQ 415
Query: 417 TTGFF--LGNFFKARTFQTFKLIRSYS 441
T LG+ F F LI+S S
Sbjct: 416 TKAVLVSLGSLVWRNLFN-FGLIKSCS 441
>gi|297849610|ref|XP_002892686.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
gi|297338528|gb|EFH68945.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
Length = 440
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/448 (49%), Positives = 301/448 (67%), Gaps = 24/448 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS ++GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ V+ YI+Q +ET + ++ + G+ T++E T
Sbjct: 68 DGRWNMDVFHVTDLNGNKLNDQSVLRYIEQSIET-VYYGENIEVN-GL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SE+ AVL+DL+C+VV+A++WTHN R A+V+++ D S+G I D +R+S I+
Sbjct: 120 GTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLRDGSSGAPILDSQRISKIEG 179
Query: 183 LLFNVLRGYDDFRKA-KTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L NVL G +D A KT +S +M+ ERRLHQ+MF+DRDYER R + + P
Sbjct: 180 RLKNVLNGDNDVNSAAKTCVSVDSMMHIERRLHQLMFEDRDYER------RSNKQETSPT 233
Query: 242 V--TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
V TV N E+ Y+V+ + +DR KLLFD+VCTLTDM+Y VFH +NT +A+ EFYIR
Sbjct: 234 VVVTVQNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIR 293
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
H DG PISSEAER+RVI CLEAA+ERRA EG+ LEL D+ GLL+++TR FREN L++
Sbjct: 294 HKDGSPISSEAERQRVILCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVT 353
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP---PKE 415
R EIST + FYVTD G+ D K+I+S+R +IG L+VK + K ++
Sbjct: 354 RTEISTSSEMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMNHKKGDGEEQ 413
Query: 416 TTTGFF--LGNFFKARTFQTFKLIRSYS 441
T LG+ F F LI+S S
Sbjct: 414 QTKAVLVSLGSLVWRNLFN-FGLIKSCS 440
>gi|359496882|ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
gi|296085715|emb|CBI29515.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 294/438 (67%), Gaps = 17/438 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y LI R++PPRV IDN+ C D T++KVDS NKHGILL+++QVL D+ LVI K+YI
Sbjct: 9 FDPDYESLIERIHPPRVCIDNDACQDCTLVKVDSANKHGILLEMVQVLTDLELVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVG--VMP---T 113
SDGGWFMDVF+V D G K+ D+ +I YIQQ L + + L++ +G + P +
Sbjct: 69 CSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRKQGISKELQARLGREMNPRHVS 128
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
EHT+ E TGTDRPGL SE+ AVLA+L C+V A WTHN R A ++ + D G I+D
Sbjct: 129 TEHTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRD 188
Query: 174 PKRLSTIKELLFNVLRG-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAV 230
P+RL+ ++E L NV+ + + K L+ P G + +RRLHQ+MF D+DYER
Sbjct: 189 PERLAHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER---CC 245
Query: 231 GRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G + S R QV++ N EK Y+V+ ++S+DRPKLLFD VCTLTDMQYVVFH V++ +
Sbjct: 246 GGCDGSSDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGS 305
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRI 349
A QE++IR +DG + +++ER RV QCL AAIERR + GL L++ ++R+GLLSDITR+
Sbjct: 306 IAVQEYFIRQMDGCTLGTQSERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRV 365
Query: 350 FRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTI-- 407
FREN LSI+ AEI G + +FYVTDV+G V P ++ IR++IG T + V +S++
Sbjct: 366 FRENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPP 425
Query: 408 -LAPKPPKETTTGFFLGN 424
L P ++ +T + N
Sbjct: 426 SLPASPSRDRSTASSVEN 443
>gi|326515010|dbj|BAJ99866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 458
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/448 (48%), Positives = 293/448 (65%), Gaps = 11/448 (2%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DE+ KL+ MNPPRV +DN + AT++KVDS NK+G LL+V+QVL D+ L I +AYISS
Sbjct: 13 DEFQKLVINMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTDLKLAINRAYISS 72
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVGVMPTEE--HTSI 119
DG WFMDVF+V+D +G K+ D +VID I+Q L + SF + R VGV E T I
Sbjct: 73 DGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRGTDRC-VGVEAEAEAAQTVI 131
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL +L CN+ +E+WTH+ R AA+++VTD TG +I++P+RL T
Sbjct: 132 ELIGRDRPGLLSEVFAVLTNLKCNIAASEVWTHDGRMAALMYVTDAETGGSIEEPERLDT 191
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIM--NRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
+K LL +VLRG +KA + + +RRLHQ+M DR R + +D+S
Sbjct: 192 VKRLLRHVLRGSSRDKKAARAAISARAAAPHAQRRLHQMMHADRGVHRADGDDAVADDRS 251
Query: 238 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V V + E+ YT++ +R +DRPKLLFD VCTLTDMQY+VFHG V +EAYQE+Y
Sbjct: 252 L-PVVVVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYLVFHGTVIAEGSEAYQEYY 310
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
IRH+D +S+ +RE++ +CLEAAI+RR +EGL LELC EDRVGLLSD+TRIFRE+ LS
Sbjct: 311 IRHLDDGAAASDEDREQLRRCLEAAIQRRNTEGLGLELCCEDRVGLLSDVTRIFREHGLS 370
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 416
+ AE++T G + + FYV +G PV + ++++R +IG L VK P
Sbjct: 371 VTHAEVATRGERAANVFYVVTASGMPVQAQAVEAVRAEIGDEILLVKEDAAAPKSPLGRD 430
Query: 417 TTGFFLGNFFKART---FQTFKLIRSYS 441
G LGN ++R+ LIRS S
Sbjct: 431 GGGRSLGNMIRSRSEKFLYNLGLIRSCS 458
>gi|218201514|gb|EEC83941.1| hypothetical protein OsI_30028 [Oryza sativa Indica Group]
Length = 467
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/458 (48%), Positives = 293/458 (63%), Gaps = 21/458 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DE+ KL+ RMNPPRV +DN + AT++KVDS NK+G LL+V+QVL ++ L IK+AYISS
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTELKLTIKRAYISS 71
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMPTEE-HTSI 119
DG WFMDVF+V+D DG K+ D +VID I+ L + SF AP RS T+I
Sbjct: 72 DGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTAI 131
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL DL CN+V++E+WTH+ R AA+VHVTD T AI D RL T
Sbjct: 132 ELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLDT 191
Query: 180 IKELLFNVLRG-----YDDFRKAKTSLSPP----GIMNRERRLHQIMFDDRDYERVE-KA 229
+K LL ++LRG D A+ + P + RRLHQ+M DDR + +
Sbjct: 192 VKRLLRHLLRGGGAGARDRKDTARADIPAPRRDGAAAHAPRRLHQMMHDDRAAAAPQPSS 251
Query: 230 VGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
RP V V++ E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V
Sbjct: 252 SSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEG 311
Query: 289 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITR 348
+EAYQE+YIRH+D P++S ER+R+ +CLEAAI+RR +EGL LELC EDRVGLLSD+TR
Sbjct: 312 SEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELCCEDRVGLLSDVTR 371
Query: 349 IFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTIL 408
IFRE+ LS+ AE++T G + + FYV +G PV+ ++++R +IG L V+
Sbjct: 372 IFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGEQVLFVREDAGG 431
Query: 409 A-PK-PPKETTTGFFLGNFFKART---FQTFKLIRSYS 441
P+ PP LGN ++R+ LIRS S
Sbjct: 432 GEPRSPPGRDRRS--LGNMIRSRSEKFLYNLGLIRSCS 467
>gi|125604137|gb|EAZ43462.1| hypothetical protein OsJ_28068 [Oryza sativa Japonica Group]
Length = 415
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/449 (49%), Positives = 286/449 (63%), Gaps = 56/449 (12%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+RRMNPP VVIDN++C ATVI+VD V KHGILL+ +QVL D+NLVI KAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIE 120
SDG WFMDVFNV D DG K+++KEV D I++ LE+ D P+ + G P+EE T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS +
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ELL NV++G D RK T++S G N ERRLH++M DD D R + G V
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVS-LGAANAERRLHRLMLDDGDAGRCGEERGGVAAA 252
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
++ +V V++ E+ YTV+ +R +DRP+LLFD + LTD+ YVVFHG
Sbjct: 253 KAKAKVVVMDCTERRYTVVILRCRDRPRLLFDTLSPLTDLHYVVFHGT------------ 300
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
GLELE+ TEDR GLLS+ITR+FRENSL
Sbjct: 301 ---------------------------------GLELEVKTEDRAGLLSEITRVFRENSL 327
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKP 412
SI RA I+T G+ DTFYV+D GNPVD K ++++ Q+GH L+VK R+ I +
Sbjct: 328 SIIRAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRAED 387
Query: 413 PKETTTGFFLGNFFKARTFQTFKLIRSYS 441
+GN K +FQ F+LIRSYS
Sbjct: 388 SGGGGAAAIIGNLLKG-SFQGFRLIRSYS 415
>gi|293332811|ref|NP_001169709.1| hypothetical protein [Zea mays]
gi|224031079|gb|ACN34615.1| unknown [Zea mays]
gi|413921674|gb|AFW61606.1| hypothetical protein ZEAMMB73_976911 [Zea mays]
Length = 473
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/462 (49%), Positives = 295/462 (63%), Gaps = 26/462 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV +DN++ AT++KVDS NK+G LL+V+QVL D+ L I +AYISS
Sbjct: 15 DEYEKLVLRMNPPRVTVDNDSDMTATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISS 74
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSI 119
DG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+I
Sbjct: 75 DGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTI 134
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI DP RL T
Sbjct: 135 ELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIDDPARLDT 194
Query: 180 IKELLFNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE---- 234
+K LL +VLRG D + A+ ++S + + RRLHQ+M DR R G E
Sbjct: 195 VKRLLRHVLRGSSRDKKAARAAVSSARVEHAPRRLHQMMQADRSARREGGGDGDGEEERE 254
Query: 235 ------DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
+ + P V V + E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V
Sbjct: 255 RGEASGNGNGVPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAE 314
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDIT 347
+EAYQE+YIRH+D SS +R+R+ + LEAAI+RR +EGL LELC EDRVGLLSD+T
Sbjct: 315 GSEAYQEYYIRHLDD---SSGEDRDRLCRGLEAAIQRRCTEGLRLELCCEDRVGLLSDVT 371
Query: 348 RIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK-IIDSIRRQIGHTKL----QV 402
RIFRE+ LS+ AE+ T G + + FYV D +G PV + +D++R +IG L +
Sbjct: 372 RIFREHGLSVTHAEVETRGARAANVFYVVDASGEPVQAQAAVDAVRAEIGEQVLLLVREQ 431
Query: 403 KRSTILAPKPPKETTTGFFLGNFFKART---FQTFKLIRSYS 441
++ PK P LGN ++R+ LIRS S
Sbjct: 432 QQDAAGGPKSPAGAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 473
>gi|449437402|ref|XP_004136481.1| PREDICTED: uncharacterized protein LOC101219701 [Cucumis sativus]
gi|449525060|ref|XP_004169538.1| PREDICTED: uncharacterized LOC101219701 [Cucumis sativus]
Length = 469
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/461 (43%), Positives = 296/461 (64%), Gaps = 24/461 (5%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+N P RV IDN + D T++KVDS+NK G+LL+V+Q+L D+NL I K+
Sbjct: 9 FDPDFDTLPERINGPTCRVCIDNESMEDCTIVKVDSLNKQGLLLEVVQILTDLNLSISKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP------ 112
YIS D GWFMDVF+V D + K+ D++VI+ IQQ + T S ++ V
Sbjct: 69 YISCDAGWFMDVFHVKDENSHKLTDQKVINSIQQAIGTTKGPDNSAKTRRYVNKLLNSDN 128
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ EHT+IE TGTDRPGLFSE+ A LADLHCNVV A W+HN R A + +++D ST I+
Sbjct: 129 SGEHTAIEMTGTDRPGLFSEISAALADLHCNVVEAHAWSHNARLACIAYISDQSTDSPIE 188
Query: 173 DPKRLSTIKELLFNVLRG--------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
DP RL+ I+E L VLR + + + +S N ERRLHQ++ +DY+
Sbjct: 189 DPHRLANIEEHLSTVLRAATAPPIASWTHTLQQEVKISATITTNVERRLHQLLVSVKDYD 248
Query: 225 RVEKAVGRVEDKSSRPQVTVLNIE----KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
+++ R + + T ++IE K Y+++++ KDRP+L+FD VCTLTDMQYV+F
Sbjct: 249 WTSESISRRPKRKEEWRKTTVSIESCDQKGYSIVSIECKDRPRLMFDTVCTLTDMQYVIF 308
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 340
H +++ + A+QE++IRHV+G ++S+ ++ RV++CLEAAIERR EG+ LELC +RV
Sbjct: 309 HASISSKKDNAFQEYFIRHVNGYALNSDYDKHRVVKCLEAAIERRVCEGVRLELCANNRV 368
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL 400
GLLSDITR+ REN L++ RA+I+T G K + FYV D++G VD ++++S++++IG L
Sbjct: 369 GLLSDITRVLRENGLNVVRADIATQGEKAINAFYVKDISGKEVDMEMVESVKKEIGPVVL 428
Query: 401 QVKRSTILAPKPPKETTTGFFLGNFFKA---RTFQTFKLIR 438
+VK T P P+ T + F + K+ R F IR
Sbjct: 429 RVKNET-SPPSTPQITRSRFSFSDMLKSQLERLSHNFIAIR 468
>gi|297799732|ref|XP_002867750.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
gi|297313586|gb|EFH44009.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/407 (51%), Positives = 277/407 (68%), Gaps = 24/407 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+EY KL+ RMN PRVVIDN C ++TV+K+DS GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E T
Sbjct: 68 DGKWNMDVFHVSDLNGNKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIK 181
GTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 ELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKS 237
L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS-------- 231
Query: 238 SRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY
Sbjct: 232 --PIVSVQNLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFY 289
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
+RH DG P+SSE ER+R+IQCL+AAIERR +G+ LELCT DR GLL+++TR+ REN L+
Sbjct: 290 VRHSDGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRVLRENGLN 349
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
I RAEIST G ++ FYVTD GN +DP+II SIR +IG L VK
Sbjct: 350 IARAEISTKDGVARNVFYVTDANGNLIDPEIIQSIREKIGIDDLSVK 396
>gi|22328873|ref|NP_194009.2| ACT domain repeat 7 protein [Arabidopsis thaliana]
gi|22138104|gb|AAM93432.1| ACR7 [Arabidopsis thaliana]
gi|115646767|gb|ABJ17111.1| At4g22780 [Arabidopsis thaliana]
gi|332659257|gb|AEE84657.1| ACT domain repeat 7 protein [Arabidopsis thaliana]
Length = 449
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/407 (51%), Positives = 276/407 (67%), Gaps = 24/407 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+EY KL+ RMN PRVVIDN C ++TV+K+DS GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E T
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIK 181
GTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 ELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKS 237
L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS-------- 231
Query: 238 SRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY
Sbjct: 232 --PIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFY 289
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
+RH DG P+SSE ER+R+IQCL+AAIERR +G+ LELCT DR GLL+++TRI REN L+
Sbjct: 290 VRHSDGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLN 349
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
I RAEIST ++ FYVTD GN +DP+II SIR +IG L VK
Sbjct: 350 IARAEISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 396
>gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 449
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/407 (51%), Positives = 276/407 (67%), Gaps = 24/407 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+EY KL+ RMN PRVVIDN C ++TV+K+DS GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E T
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIK 181
GTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 ELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKS 237
L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS-------- 231
Query: 238 SRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P V+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY
Sbjct: 232 --PIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFY 289
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
+RH DG P+SSE ER+R+IQCL+AAIERR +G+ LELCT DR GLL+++TRI REN L+
Sbjct: 290 VRHSDGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLN 349
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
I RAEIST ++ FYVTD GN +DP+II SIR +IG L VK
Sbjct: 350 IARAEISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 396
>gi|42761392|dbj|BAD11660.1| uridylyl transferase-like [Oryza sativa Japonica Group]
Length = 475
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/466 (47%), Positives = 293/466 (62%), Gaps = 29/466 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIK--------VDSVNKHGILLQVIQVLNDVNLV 54
DE+ KL+ RMNPPRV +DN + AT++K VDS NK+G LL+V+QVL ++ L
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKLT 71
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMP 112
IK+AYISSDG WFMDVF+V+D DG K+ D +VID I+ L + SF AP RS
Sbjct: 72 IKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAE 131
Query: 113 TEE-HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
T+IE G DRPGL SEV AVL DL CN+V++E+WTH+ R AA+VHVTD T AI
Sbjct: 132 AAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAI 191
Query: 172 KDPKRLSTIKELLFNVLRG-----YDDFRKAKTSLSPP----GIMNRERRLHQIMFDDRD 222
D RL T+K LL ++LRG D A+ ++ P + RRLHQ+M DDR
Sbjct: 192 DDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQMMHDDRA 251
Query: 223 YERVE-KAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
+ + RP V V++ E+ YT++ +R +DRPKLLFD VCTLTDMQYVVF
Sbjct: 252 AAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVF 311
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 340
HG V +EAYQE+YIRH+D P++S ER+R+ +CLEAAI+RR +EGL LEL EDRV
Sbjct: 312 HGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELYCEDRV 371
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL 400
GLLSD+TRIFRE+ LS+ AE++T G + + FYV +G PV+ ++++R +IG L
Sbjct: 372 GLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGEQVL 431
Query: 401 QVKRSTILA-PK-PPKETTTGFFLGNFFKART---FQTFKLIRSYS 441
V+ P+ PP LGN ++R+ LIRS S
Sbjct: 432 FVREDAGGGEPRSPPGRDRRS--LGNMIRSRSEKFLYNLGLIRSCS 475
>gi|168024574|ref|XP_001764811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684105|gb|EDQ70510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/440 (46%), Positives = 285/440 (64%), Gaps = 23/440 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y +PPRV I+N+T + TV++V S ++HGILL V+QVL D++LVI K+ +
Sbjct: 9 FDPDYETASSSFDPPRVTIENDTSDNVTVVQVHSADRHGILLNVVQVLTDLDLVIVKSDM 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSVGVMPTEEH 116
SD GWF DVF+V+D G K+RD+ V+D+IQ R + S A LR S G + +H
Sbjct: 69 FSDKGWFFDVFHVVDHSGNKVRDRSVLDHIQNSLGYRTRREQSSADLLRRSSG-LSVSDH 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E TG DRPGL SE+ A+L L CNV AE+WTHN R A V+++TD +TG I+ R
Sbjct: 128 TVVELTGPDRPGLLSEISAILTQLDCNVNAAEVWTHNLRVACVIYLTDTTTGGPIQTQSR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L IKE L VLRG D A+ + I + ERRLHQ+M+DDR + G+
Sbjct: 188 LELIKEQLSKVLRGAHDENLARWKIEYATEITHVERRLHQLMYDDR------RHAGQDYS 241
Query: 236 KSS--RPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+SS RP++ + E+ Y++++++ KDRPKLLFDIVCTLTDMQYV+ H ++N+ + Q
Sbjct: 242 RSSEDRPKIQIKRNERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSHEADTTQ 301
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
EF+IRH +G + + AE + +I CLEAAI RR ++GL LELC DRVGLLS++T+IFREN
Sbjct: 302 EFFIRHENGCTLETPAE-QHLIVCLEAAINRRTTKGLRLELCMNDRVGLLSEVTKIFREN 360
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP 413
LS+ RA++ST K + FYV D +G PV+ K+++ +R+ IGH LQVK + PP
Sbjct: 361 GLSVARADVSTRDDKAVNVFYVLDASGRPVNMKVVEEMRKTIGHAILQVKGT------PP 414
Query: 414 KETTTGFFLGNFFKA--RTF 431
+E+ NFF RTF
Sbjct: 415 QESELPNPGANFFGGLYRTF 434
>gi|224129764|ref|XP_002320665.1| predicted protein [Populus trichocarpa]
gi|222861438|gb|EEE98980.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/436 (45%), Positives = 279/436 (63%), Gaps = 19/436 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E+ L+ R+ PPRV +DN T D T+IKVDS NK GILL+++QVL D++LVI K+YI
Sbjct: 10 IDAEFESLMERIYPPRVCVDNETYQDCTLIKVDSANKQGILLEMVQVLTDLDLVISKSYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-------MPT 113
SSDGGWFM+VF+V D G K+ D +I YIQQ L D S S + +
Sbjct: 70 SSDGGWFMEVFHVTDQLGSKLTDDSLILYIQQALCVDRRRGVSKESQTSLHREVRPPYAS 129
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+HT++E TGTDRPGL SE+ AVL+ L C+V + +WTHN+RAA+++++ D G I D
Sbjct: 130 TDHTAMEITGTDRPGLLSEISAVLSKLECHVTASAVWTHNNRAASIIYMEDGFQGGPITD 189
Query: 174 PKRLSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRE-RRLHQIMFDDRDYERVEKA 229
PKRL+ ++E L NV+ G + R + + PG RRLHQ+M+ + DYE +
Sbjct: 190 PKRLAHVQEQLENVVEAHHGVGERRSVRLTAPAPGQKTHTGRRLHQLMYANMDYEPCQGC 249
Query: 230 VGRVEDKSSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
G + R T +++ EK Y+V+ +RS+DRPKLLFD +C LTDMQYVVFH
Sbjct: 250 NG--GGLAHRNNCTKIHVSIDSCKEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAA 307
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLL 343
V+ T A QE++IR DG + +E+ER ++ QCL AAIERR S G L++CT +R+GLL
Sbjct: 308 VSAKGTMADQEYFIRQQDGCTLDTESERHKLTQCLIAAIERRVSHGARLDICTHNRMGLL 367
Query: 344 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
S++TR FREN LSI RAEI T G + +FYVTD +G +P+ ID +++++G + + V
Sbjct: 368 SNVTRAFRENGLSISRAEIGTNGDRAVGSFYVTDASGYEANPQAIDEVKKEMGGSVVVVN 427
Query: 404 RSTILAPKPPKETTTG 419
+S PK + + G
Sbjct: 428 KSPGWTPKTSRTPSVG 443
>gi|255568655|ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
gi|223535459|gb|EEF37129.1| amino acid binding protein, putative [Ricinus communis]
Length = 477
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/472 (44%), Positives = 294/472 (62%), Gaps = 36/472 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E+ LI R+ PPRV IDN C D TV+KVDS NKHGILL+++QVL D++LVI K+YI
Sbjct: 9 IDPEFESLIERIYPPRVCIDNEACQDCTVVKVDSANKHGILLEMVQVLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVG--VMP---T 113
SDGGWFMDVF+V D G K+ D+ +I YIQQ L T+ A + L++ + V P +
Sbjct: 69 CSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCTNRRAGASQELQNCLKREVRPRHVS 128
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+HT++E TG DRPG+ SE+ AVLA+L C+V A WTHN RAA ++++ D +G I D
Sbjct: 129 TDHTAMEMTGIDRPGMLSEISAVLAELQCHVTAAVAWTHNSRAACIIYMEDGLSGGPITD 188
Query: 174 PKRLSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+L+ ++E L NV+ G + R + + G + ERRLHQ+M DYE
Sbjct: 189 SNKLAHVEEQLQNVVEAHHGIGEMRSVRLASPVTGQTHTERRLHQLMSATLDYE---PCC 245
Query: 231 GRVE-DKSSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
G + D + + T +++ EK Y+V+ MRS DRPKLLFD +C LTDMQYVVFH
Sbjct: 246 GCTDGDAAHQRNCTKIHVSIESCKEKGYSVVNMRSMDRPKLLFDTLCALTDMQYVVFHAA 305
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLL 343
V++ T A QE++IRH DG + +E+ER ++ +CL AA ERRAS GL L++ T +RVGLL
Sbjct: 306 VSSKGTMARQEYFIRHKDGCTLDTESERHKLTKCLIAATERRASHGLRLDISTHNRVGLL 365
Query: 344 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
SD+TR+FREN LSI RAEI G + +FY+TD +G+ + ++ +R++IG + L V
Sbjct: 366 SDVTRVFRENGLSISRAEIGLQGDRAVGSFYITDASGDEANTHTLELVRKEIGGSVLVVN 425
Query: 404 RSTILAPKPP-----KETTTG--------FFLGNFFKA---RTFQTFKLIRS 439
+S P+ P T++G F LG+ + R F IRS
Sbjct: 426 KSPGWTPRTPSTAGISRTSSGSVGEEKPKFSLGSLLWSQLERLSGNFGSIRS 477
>gi|255548868|ref|XP_002515490.1| amino acid binding protein, putative [Ricinus communis]
gi|223545434|gb|EEF46939.1| amino acid binding protein, putative [Ricinus communis]
Length = 478
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/462 (44%), Positives = 295/462 (63%), Gaps = 37/462 (8%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ +L R+ P RV IDN + D +V+KVDSVNK G+LL+V+QVL D+NL I K+
Sbjct: 9 FDPDFDRLPERIYGPTCRVCIDNESMEDCSVVKVDSVNKQGLLLEVVQVLTDLNLTISKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVM--- 111
YISSD GWFMDVF+V D GKK+ D+ VIDYI Q + ET + P +S V +
Sbjct: 69 YISSDAGWFMDVFHVKDERGKKLTDQHVIDYIHQAIGTTRETQSPATP--KSYVNDVFEG 126
Query: 112 -PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ EHT+IE +GTDRPGLFSE+ A L DLHCN+V A W+HN R A V +++D ST
Sbjct: 127 EHSSEHTAIEMSGTDRPGLFSEISAALVDLHCNIVEAHAWSHNARLACVAYISDQSTDTP 186
Query: 171 IKDPKRLSTIKELLFNVLRG------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
I DP RL+TI++ L V+R + + + N ERRLHQ+M RD++
Sbjct: 187 IDDPHRLATIEDHLTTVIRATGPQPNSQEVKTGGVVGGEGTVTNVERRLHQLMLSARDFD 246
Query: 225 ------------RVEKAVGRVEDKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDI 268
R + G D + TV++I EK Y+++++ KDRP+L+FD
Sbjct: 247 GPLGSSITGSGPRSGRGSGSGLDNEDEGRKTVVSIDNCEEKGYSIVSIECKDRPRLMFDT 306
Query: 269 VCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VCTLTDMQYV+FH + G A+QE++IR++DG +++E+E+ERVI+CLEAAIERR
Sbjct: 307 VCTLTDMQYVIFHASIGAGDDGYAFQEYFIRYIDGYALNTESEKERVIKCLEAAIERRVC 366
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
EG+++ELC E+RVGLLSDITR+ REN L++ RA+++T G K + FYV D++GN VD
Sbjct: 367 EGVKVELCAENRVGLLSDITRVLRENGLTVVRADVATQGEKAVNAFYVRDISGNEVDMGF 426
Query: 388 IDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKAR 429
+ S+++++G L+VK+ ++ ++ F +G+ K++
Sbjct: 427 VKSMKKEMGAINLEVKKD--ISRPISRDQRARFSIGDMLKSQ 466
>gi|168045560|ref|XP_001775245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673458|gb|EDQ59981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/435 (45%), Positives = 284/435 (65%), Gaps = 17/435 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y NPPRV I+N +ATV++V S N+HGILL V+QVL D++LVI K+ +
Sbjct: 9 FDPDYETTSSSFNPPRVTIENEAYENATVVQVHSANRHGILLNVVQVLTDLDLVITKSDM 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPT 113
SDGGWF+DVF+V+D G K+RD+ V+DYIQ+ + + S A LR S G + T
Sbjct: 69 FSDGGWFLDVFHVVDDSGNKVRDQSVLDYIQKVCGGHSIPTQLEQSSADLLRRSSG-LTT 127
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+HT +E TG DRPGL SE+ AVL + CNV AE+WTHN R A V++ T+ +TG I+
Sbjct: 128 ADHTVVELTGPDRPGLLSEISAVLTSMECNVNAAEVWTHNHRVACVIYFTNTNTGGPIES 187
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGR 232
L IKE L VL+G D + A+ + I + ERRLHQ+M++DR + E+ R
Sbjct: 188 QSLLELIKEQLSRVLKGDHDEQHARCKIEYASEITHVERRLHQLMYEDRLHG--EQDCDR 245
Query: 233 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
+ RP++ + E+ Y++++++ KDRPKLLFDIVCTLTDMQYV+ H ++N+ E
Sbjct: 246 --NSQGRPKIQIKKSERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSPGPETT 303
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRE 352
QEF+IRH +G + + AE+ + CLEAAI RR +EGL LELC DRVGLLSD+T+IFRE
Sbjct: 304 QEFFIRHENGCVLDTAAEQHLKV-CLEAAINRRTTEGLRLELCMNDRVGLLSDVTKIFRE 362
Query: 353 NSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP 412
N LS+ RA+++T K + FYV D +G VD K+++++R+ IGH LQVK + +
Sbjct: 363 NGLSVARADVTTRDDKAVNVFYVVDASGCTVDMKVVEAMRKSIGHAILQVKG---VPRQE 419
Query: 413 PKETTTGFFLGNFFK 427
P+ +++ LG F+
Sbjct: 420 PELSSSKLSLGGLFR 434
>gi|226506214|ref|NP_001148163.1| LOC100281771 [Zea mays]
gi|195616314|gb|ACG29987.1| ACR5 [Zea mays]
gi|414869678|tpg|DAA48235.1| TPA: ACR5 [Zea mays]
Length = 471
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/460 (49%), Positives = 294/460 (63%), Gaps = 19/460 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
M DEY KL+ RMNPPRV +DN++ AT++KVDS NK+G LL+V+QVL D+ L IK+AYI
Sbjct: 12 MVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHT 117
SSDG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T
Sbjct: 72 SSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQT 131
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IE G DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI+DP RL
Sbjct: 132 TIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARL 191
Query: 178 STIKELLFNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDRD-----YERVEKAVG 231
T + LL +VLRG D + A+ ++S + + RRLHQ+M DR E
Sbjct: 192 DTARRLLRHVLRGSSRDKKAARAAVSARVVEHAPRRLHQMMRADRSARRDGEGEGEGDGE 251
Query: 232 RVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R + P V V + E+ YT++ +R +DR KLLFD VCTLTDMQYVVFHG V +E
Sbjct: 252 RERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSE 311
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIF 350
AYQE+YIRH+D SS ERER+ + LEAAI+RR +EGL LELC EDRVGLLSD+TR+F
Sbjct: 312 AYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRVF 371
Query: 351 RENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVDPKIIDSIRRQIGHTKLQVKR---ST 406
RE+ LS+ AE+ T G + + FYV D +G PV + + ++R +IG L V+ +
Sbjct: 372 REHGLSVTHAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQLLFVREHQDAA 431
Query: 407 ILAPKPPKETTTGF--FLGNFFKART---FQTFKLIRSYS 441
A + T G LGN ++R+ LIRS S
Sbjct: 432 AAAANGTRSTVAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 471
>gi|413937243|gb|AFW71794.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937244|gb|AFW71795.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937245|gb|AFW71796.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
Length = 460
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/422 (47%), Positives = 276/422 (65%), Gaps = 28/422 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY +R+NPPRV IDN TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI
Sbjct: 5 FDPEYENFNQRINPPRVCIDNTTCSDCTLVKVDSMNKNGILLEVLQVLSDLDLHIFKAYI 64
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF-----APSLRSSVGVMPTEE 115
+SDGGWFMDVF+V+D G+KI D + I YI++ L +++ + S SVG+ +
Sbjct: 65 TSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKALGPESNLLGAKGSNSAGRSVGLHSIGD 124
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE G DR GL SE+ AVLADL CNV+ AE+WTH R A VV+V D +TG AI DP
Sbjct: 125 HTAIELKGPDRRGLLSEIFAVLADLQCNVLAAEVWTHRMRVACVVYVNDVATGQAIDDPD 184
Query: 176 RLSTIKELLFNVLR----------------GYDDFRKAKTSLSPPGIMNRERRLHQIMFD 219
R++ +++ L +VLR + +F A S +P + +RRLHQ+M
Sbjct: 185 RVARVEDRLRHVLRGYGGGGGAGDDDDGSGAHANF--AAASSTPHHV---DRRLHQLMHA 239
Query: 220 DRDYERVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
D D + A + RP VTV + EK Y+V+ ++ KDR KLLFDIVCTLTDM+YV
Sbjct: 240 DVDAVHGDGAHAAAGGEGDRPAVTVEHCEEKSYSVVNVKCKDRSKLLFDIVCTLTDMEYV 299
Query: 279 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTED 338
VFH V++ QE YIR DG + + E E+VI+CLEAAI RR SEG LE+C D
Sbjct: 300 VFHAAVSSEANYGIQELYIRRKDGKTLLKD-EAEKVIRCLEAAISRRVSEGFTLEVCGRD 358
Query: 339 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT 398
RVGLLSD+TR+ RE+ L++ RA+++T GG+ + FYV + +G PVD K ++ +R Q G T
Sbjct: 359 RVGLLSDVTRVLREHGLTVSRADVTTAGGQATNVFYVRNPSGQPVDMKTVEGLRGQFGQT 418
Query: 399 KL 400
+
Sbjct: 419 AM 420
>gi|115446687|ref|NP_001047123.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|46389854|dbj|BAD15455.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725785|dbj|BAD33316.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113536654|dbj|BAF09037.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|215701465|dbj|BAG92889.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 481
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/432 (47%), Positives = 275/432 (63%), Gaps = 29/432 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY +R+NPPRV IDN+TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI
Sbjct: 5 FDPEYENFSQRINPPRVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYI 64
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTE 114
+SDGGWFMDVF+V+D G+K+ D++ I +I++ L D++ + SVG+
Sbjct: 65 TSDGGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIG 124
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+HT+IE G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP
Sbjct: 125 DHTAIELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDP 184
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIMFDDRDY 223
RLS I+ L VLRG+ P + +RRLHQ+M D D
Sbjct: 185 CRLSRIEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDA 244
Query: 224 ERVEKAVGRV---------EDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLT 273
+ + R RP VTV + EKDY+V+ ++ +DR KLLFDIVCTLT
Sbjct: 245 DDDDGLDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLT 304
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELE 333
DM YVV H V++ QE YIR DG + + E RVI+CLEAAI RR SEG LE
Sbjct: 305 DMHYVVSHASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLE 363
Query: 334 LCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRR 393
LC DRVGLLSD+TR+ RE+ L++ RA+++T+GG+ + FYV D +G PVD K I+ +R
Sbjct: 364 LCGRDRVGLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRV 423
Query: 394 QIGHT-KLQVKR 404
Q+GHT L VK+
Sbjct: 424 QVGHTVMLNVKK 435
>gi|2827555|emb|CAA16563.1| Translation factor EF-1 alpha - like protein [Arabidopsis thaliana]
gi|7269125|emb|CAB79233.1| Translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 458
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/416 (50%), Positives = 276/416 (66%), Gaps = 33/416 (7%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKV---------DSVNKHGILLQVIQVLNDVNL 53
+EY KL+ RMN PRVVIDN C ++TV+KV DS GILL+ +Q+L D+NL
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKVFTLTQPSSIDSARSPGILLESVQLLTDMNL 67
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
IKKAYISSDG W MDVF+V D +G K+ D+ +I YI++ +ET S G+
Sbjct: 68 WIKKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL--- 122
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 172
T++E TGTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I
Sbjct: 123 ---TALELTGTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDG 179
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEK 228
D R+ ++ L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK
Sbjct: 180 DSDRVQRVEGQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEK 239
Query: 229 AVGRVEDKSSRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
+ P V+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T
Sbjct: 240 S----------PIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTV 289
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDIT 347
A+ EFY+RH DG P+SSE ER+R+IQCL+AAIERR +G+ LELCT DR GLL+++T
Sbjct: 290 GETAFLEFYVRHSDGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVT 349
Query: 348 RIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
RI REN L+I RAEIST ++ FYVTD GN +DP+II SIR +IG L VK
Sbjct: 350 RILRENGLNIARAEISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 405
>gi|219886627|gb|ACL53688.1| unknown [Zea mays]
Length = 471
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/460 (49%), Positives = 291/460 (63%), Gaps = 19/460 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
M DEY KL+ RMNPPRV +DN++ AT++KVDS NK+G LL+V+QVL D+ L IK+AYI
Sbjct: 12 MVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHT 117
SSDG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T
Sbjct: 72 SSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQT 131
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IE G DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI+DP RL
Sbjct: 132 TIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARL 191
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE-RRLHQIMFDDRD-----YERVEKAVG 231
T + LL +VLRG +KA + ++ RRLHQ+M DR E
Sbjct: 192 DTARRLLRHVLRGSSRDKKAARAAVSARVVEYAPRRLHQMMRADRSARRDGEGEGEGDGE 251
Query: 232 RVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R + P V V + E+ YT++ +R +DR KLLFD VCTLTDMQYVVFHG V +E
Sbjct: 252 RERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSE 311
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIF 350
AYQE+YIRH+D SS ERER+ + LEAAI+RR +EGL LELC EDRVGLLSD+TR+F
Sbjct: 312 AYQEYYIRHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRVF 371
Query: 351 RENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVDPKIIDSIRRQIGHTKLQVKR---ST 406
RE+ LS+ AE+ T G + + FYV D +G PV + + ++R +IG L V+ +
Sbjct: 372 REHGLSVTHAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQLLFVREHQDAA 431
Query: 407 ILAPKPPKETTTGF--FLGNFFKART---FQTFKLIRSYS 441
A + T G LGN ++R+ LIRS S
Sbjct: 432 AAAANGTRSTVAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 471
>gi|224095019|ref|XP_002310330.1| predicted protein [Populus trichocarpa]
gi|222853233|gb|EEE90780.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/481 (43%), Positives = 288/481 (59%), Gaps = 49/481 (10%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E+ LI R+ PPRV IDN D T++K DS NKHGILL+++QVL D++LVI K+YI
Sbjct: 9 IDPEFESLIERIYPPRVCIDNEAYQDCTLVKADSANKHGILLEMVQVLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT------- 113
SSDGGWFMDVF+V D G K+ D+ +I YIQQ L A R +PT
Sbjct: 69 SSDGGWFMDVFHVTDQLGNKLTDESLILYIQQAL-----CANRRRGVSKELPTCLNREVR 123
Query: 114 -----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
EHT++E GTDRPGL SE+ AVL +L C+V A WTHN RAA+++++ D G
Sbjct: 124 PRHVSTEHTTLEMAGTDRPGLLSEISAVLFELECHVTAALAWTHNTRAASIIYMEDGFRG 183
Query: 169 YAIKDPKRLSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNR-ERRLHQIMFDDRDYE 224
I DPKRL+ ++E L NV+ G + R + + PG ERRLHQ+M+ + DYE
Sbjct: 184 GPITDPKRLAHVQEQLENVVEARHGMGERRSVRLTAPAPGQQTHTERRLHQLMYANIDYE 243
Query: 225 RVEKAVGRVEDKSSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
+ G + R T ++ EK Y+V+ +RS+DRPKLLFD +C LTDMQYV
Sbjct: 244 PCQGCNG--GGAAHRNNCTKTHVFIESCEEKGYSVVNVRSRDRPKLLFDTLCALTDMQYV 301
Query: 279 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTED 338
VFH +V++ T A QE++IR DG + +++ER ++ QCL AAIERR S GL L++ T +
Sbjct: 302 VFHAVVSSKGTMADQEYFIRQKDGCTLDTDSERHKLTQCLIAAIERRVSHGLRLDIRTHN 361
Query: 339 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT 398
R+GLLSD+TR FREN LSI AEI T G + +FYVTD +G +P++I+ ++++IG +
Sbjct: 362 RMGLLSDLTRAFRENGLSISSAEIGTNGDRAVGSFYVTDASGYEANPQVIEHVKKEIGGS 421
Query: 399 KLQVKRSTILAPKPPKETTTG-----------------FFLGNFFKA---RTFQTFKLIR 438
+ V +S PK K + F LG+ F + R F IR
Sbjct: 422 IVVVNKSPGWTPKTSKTPSVASISRTSSGSSIHEDKPRFSLGSLFWSQLERLSNNFSSIR 481
Query: 439 S 439
S
Sbjct: 482 S 482
>gi|168033466|ref|XP_001769236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679501|gb|EDQ65948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/432 (46%), Positives = 273/432 (63%), Gaps = 15/432 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y N PRV ++ +AT++KV+S N+HGILL V+QVL D++L I K+ I
Sbjct: 9 FDPDYETTCSSFNSPRVTVETEASENATIVKVNSANRHGILLNVVQVLTDLDLTITKSDI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSVGVMPTEEH 116
D GWFMDVF+V+D +G K DK+ D+I R + A SLR S G + +H
Sbjct: 69 FHDLGWFMDVFHVVDSNGNKALDKQTCDHIMNSLGYRTRREQFSADSLRRSTG-LTVADH 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE TG DRPGL SE+ AVL L CNV AE+WTHN RAA++V+ TD STG I + +
Sbjct: 128 TVIELTGPDRPGLLSELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSSTGRPITNQSK 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L IKE L V++G D A+ + I + ERRLHQ+M+DDR E R +
Sbjct: 188 LDYIKEQLSRVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRANE----VPDRSGN 243
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
RP + + E+ Y+V+++ KDRPKLLFDIVCTLTDMQYV++H ++N +E QEF
Sbjct: 244 MQGRPAIHIKRNERGYSVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPGSETSQEF 303
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
+IRHV+G + + AE + + CLEAAI RR SEGL LELC DRVGLLSD+TRIFREN L
Sbjct: 304 FIRHVNGCTLDTAAE-QHLKACLEAAISRRTSEGLRLELCMNDRVGLLSDVTRIFRENGL 362
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
S+ RA+I+T K + FYV D +G PV+ K+++++R IG + L+VK L P+
Sbjct: 363 SVARADITTRHDKAINVFYVVDASGRPVNMKVVEAMRETIG-SSLEVKG---LPRSEPEL 418
Query: 416 TTTGFFLGNFFK 427
+T LG F+
Sbjct: 419 PSTKLSLGGLFR 430
>gi|115477499|ref|NP_001062345.1| Os08g0533300 [Oryza sativa Japonica Group]
gi|113624314|dbj|BAF24259.1| Os08g0533300 [Oryza sativa Japonica Group]
Length = 498
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/489 (45%), Positives = 293/489 (59%), Gaps = 52/489 (10%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIK------------------------------- 31
DE+ KL+ RMNPPRV +DN + AT++K
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVLDNSCRLIQSISWEEFFSQTGE 71
Query: 32 VDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
VDS NK+G LL+V+QVL ++ L IK+AYISSDG WFMDVF+V+D DG K+ D +VID I+
Sbjct: 72 VDSANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIE 131
Query: 92 QRLETDA-SF-APSLRSSVGVMPTEE-HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAE 148
L + SF AP RS T+IE G DRPGL SEV AVL DL CN+V++E
Sbjct: 132 LSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSE 191
Query: 149 IWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG-----YDDFRKAKTSLSP 203
+WTH+ R AA+VHVTD T AI D RL T+K LL ++LRG D A+ ++
Sbjct: 192 VWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPA 251
Query: 204 P----GIMNRERRLHQIMFDDRDYERVE-KAVGRVEDKSSRPQVTVLNI-EKDYTVITMR 257
P + RRLHQ+M DDR + + RP V V++ E+ YT++ +R
Sbjct: 252 PRRDGAAAHAPRRLHQMMHDDRAAAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVR 311
Query: 258 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
+DRPKLLFD VCTLTDMQYVVFHG V +EAYQE+YIRH+D P++S ER+R+ +C
Sbjct: 312 CRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRC 371
Query: 318 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEAAI+RR +EGL LEL EDRVGLLSD+TRIFRE+ LS+ AE++T G + + FYV
Sbjct: 372 LEAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVA 431
Query: 378 VTGNPVDPKIIDSIRRQIGHTKLQVKRSTILA-PK-PPKETTTGFFLGNFFKART---FQ 432
+G PV+ ++++R +IG L V+ P+ PP LGN ++R+
Sbjct: 432 ASGEPVEAHAVEAVRAEIGEQVLFVREDAGGGEPRSPPGRDRRS--LGNMIRSRSEKFLY 489
Query: 433 TFKLIRSYS 441
LIRS S
Sbjct: 490 NLGLIRSCS 498
>gi|224141917|ref|XP_002324307.1| predicted protein [Populus trichocarpa]
gi|222865741|gb|EEF02872.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/430 (46%), Positives = 284/430 (66%), Gaps = 30/430 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D ++ L R+ P V IDN + D TV+KVDSVNK G+LL+V+QVL D+NL I K YI
Sbjct: 9 FDPDFDSLPERIFGPTVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKGYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVM----PTE 114
SSD GWFMDVF+V D GKK+RD+ VI+YIQQ + D S+ P+ R+ + +
Sbjct: 69 SSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQVINCDLSPSYPPNARAYTNNIFEADHSS 128
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT+IE +GTDRPGLFSE+ A LADL CN+V W+HN R A V +++D S+ I+DP
Sbjct: 129 EHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPIEDP 188
Query: 175 KRLSTIKELLFNVLRGYD----------DFRKAKTS--LSPPG-IMNRERRLHQIMFDDR 221
RL++I++ L VLR + R+ KT L G + N ERRLHQ+M R
Sbjct: 189 HRLASIEDHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLMLSVR 248
Query: 222 DYE----RVEKAVGRVEDKS-SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDM 275
D++ G +K S+ V++ N +K+Y+++ + KDR +L+FD +CTL DM
Sbjct: 249 DFDGPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDM 308
Query: 276 QYVVFHGMVNT---GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL 332
QYV+FH V++ GR A+QE++IRH DG ++E+E+ERVI+CLEAAIERR SEG+ L
Sbjct: 309 QYVIFHASVSSDHDGR--AFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSEGVLL 366
Query: 333 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIR 392
+L E+R+GLLSDITR+ REN L++ RA+++T G K + FYV D++GN VD I S++
Sbjct: 367 KLRAENRLGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGNEVDMGFIKSMK 426
Query: 393 RQIGHTKLQV 402
+++G T L+V
Sbjct: 427 KEMGLTDLEV 436
>gi|356554239|ref|XP_003545456.1| PREDICTED: uncharacterized protein LOC100820595 [Glycine max]
Length = 483
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/469 (44%), Positives = 288/469 (61%), Gaps = 46/469 (9%)
Query: 2 DDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAY 59
D E+ L R++ P RV +DN + TV+KVDSVNK G+LL+V+Q+L D+NL I K++
Sbjct: 10 DPEFDTLPERIHGPPCRVCVDNESMEGCTVVKVDSVNKQGLLLEVVQILTDMNLQICKSF 69
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM-------- 111
ISSD GWFMDVF+V D +G K+ D++VI+ IQQ + + +PS + S
Sbjct: 70 ISSDAGWFMDVFHVRDENGNKLTDQKVINDIQQAIGRSRASSPSQQHSNNNNNNSVFTTM 129
Query: 112 ----------------PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
P ++HT+IE TG DRPGLFSE+ A LADLHCN+V A W+HN R
Sbjct: 130 TNYKTYSKRLLPLLPNPNDQHTAIEMTGADRPGLFSEISAALADLHCNIVEAHAWSHNAR 189
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR--------GYDDFRKAKTS--LSPPG 205
A V +++D ST AI DP RL++I++ L VLR G + KTS L G
Sbjct: 190 LACVAYISDQSTDTAIDDPSRLASIEDHLTTVLRATTNPNGGGGANHPDVKTSELLGGEG 249
Query: 206 IMNR-ERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIE-KDYTVITMRSKDRPK 263
M ERRLHQ+M RD+E E K + V+V + E K Y+++++ KDRP+
Sbjct: 250 QMTTVERRLHQLMLSVRDFETPSSP---KEKKGRKRMVSVESCEQKGYSIVSIECKDRPR 306
Query: 264 LLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
L+FD VCTLTDMQYV+FH + + A QE++IRHVDG + + +E+ERV++CLEAAIE
Sbjct: 307 LMFDTVCTLTDMQYVIFHASITSHAGYACQEYFIRHVDGCALDTASEKERVMKCLEAAIE 366
Query: 324 RRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
RR EG+ LELC ++RVGLLSDITR+ REN L + RA++ T G K + FYV D++GN V
Sbjct: 367 RRVCEGIRLELCADNRVGLLSDITRVLRENGLVVVRADVETHGEKSVNAFYVRDISGNEV 426
Query: 384 DPKII-DSIRRQIGH-TKLQVKRSTI-LAPKPPKETTTGFFLGNFFKAR 429
D + +S+++++G L VK T P PK+ F G ++R
Sbjct: 427 DIEYFSNSVKKEMGPIATLHVKNDTNRRKPNSPKQAPLSF--GGMLRSR 473
>gi|302812986|ref|XP_002988179.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
gi|300143911|gb|EFJ10598.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
Length = 482
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/466 (44%), Positives = 291/466 (62%), Gaps = 36/466 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L +NPPRVVI+N DATVIK+DSVN+HGILL+V+QVL D++L I KAY+
Sbjct: 13 FDPEYESLNASLNPPRVVIENAAFTDATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYV 72
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSD GWFMDVF+V D DG KI D+EV+ +IQ+ + R S+G P +HT+IE
Sbjct: 73 SSDAGWFMDVFHVTDIDGNKITDEEVLKFIQEVCSAEG--GEITRVSLGTGP-HQHTAIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH-STGYAIKDPKRLST 179
+G +RPGL SEV + L+ ++CNV +A +WTHN R A ++ V + S+G I+D +L
Sbjct: 130 LSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDNACSSGGPIEDCDKLKD 189
Query: 180 IKELLFNVLRGYDDFR---KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVED 235
IK+ L V+R D R +T+ G+ + ERRLHQ+M D D+ + + GR+ D
Sbjct: 190 IKDRLCRVIRANDGERGGGAGRTADFFSGLTHMERRLHQMMSADEDHSGESRELEGRLGD 249
Query: 236 KS--------SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 286
++ RP VTV N +E+ Y+V+ + +DR KLLFD VCTLTDM Y++FH + +
Sbjct: 250 ETEQRTVNGKGRPAVTVRNCVERGYSVVNIHCRDRSKLLFDTVCTLTDMDYMIFHATILS 309
Query: 287 GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDI 346
AYQEFYIRH DG + ++ ER+R+I+ L AAI+RR EGL LELCT DRVGLLSD+
Sbjct: 310 EGYFAYQEFYIRHTDGCTLETDEERQRLIKRLVAAIQRRFPEGLRLELCTYDRVGLLSDV 369
Query: 347 TRIFRENSLSIKRAEISTI-GGKVKDTFYVTD-VTGNPVDPKIIDSIRRQIGHTKLQVKR 404
T++F + L + RA +ST G V +TFYVTD +G+ VD + +++IR ++G L V+
Sbjct: 370 TKVFHRHGLCVTRAHVSTTRAGTVANTFYVTDAASGDAVDMRTVEAIREELGQAMLNVRS 429
Query: 405 STIL--------APKPPKETTTGFFLGNFFK---ARTFQTFKLIRS 439
+ + +P P F L FFK R + LI S
Sbjct: 430 APVCPQLLGLDDSPSPR------FSLAAFFKLHSERILYSLGLITS 469
>gi|357149509|ref|XP_003575136.1| PREDICTED: uncharacterized protein LOC100839017 [Brachypodium
distachyon]
Length = 450
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/445 (46%), Positives = 286/445 (64%), Gaps = 23/445 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY +R+NPPRV IDN+T ++ TV+KVDS+NK+GILL+V+QVL+D++L I KAYI
Sbjct: 5 FDPEYENFNQRINPPRVCIDNDTMSECTVVKVDSMNKNGILLEVVQVLSDLDLTILKAYI 64
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS-------SVGVMPT 113
+SDGGWFMDVF+V++ G+K+ D + I YI++ L ++ PS + SVG+
Sbjct: 65 TSDGGWFMDVFHVLNKQGQKVTDDKTIKYIEKALGPGSNL-PSAKKGGGSPGRSVGMHSI 123
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK- 172
+HT+IE G DR GL SE+ AVLA+L CNV+ AE+WTH R A VV+V D +TG I
Sbjct: 124 GDHTAIELKGPDRTGLLSEIFAVLAELQCNVLAAEVWTHRARVACVVYVNDVATGKPIDV 183
Query: 173 DPKRLSTIKELLFNVLRGY----DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
D +R+++I+ L NVLRG+ +D A T + G + +RRLHQ+M D + +
Sbjct: 184 DTRRMTSIEHRLRNVLRGHGGDDEDGTGAHTEFA-VGSTHVDRRLHQLMNADMELVDAQG 242
Query: 229 AVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
V D V EKDY+V+ +R +DR KLLFDIVCTLTDMQYVV H V++
Sbjct: 243 EGEEVADDGMSVTVGYCK-EKDYSVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDG 301
Query: 289 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITR 348
QE +IR DG + + E ++V++CL+AAI RR SEG LE+C DRVGLLS++TR
Sbjct: 302 LYGVQELFIRRKDGRTLLKD-EEDKVVKCLQAAISRRVSEGFTLEVCGRDRVGLLSEVTR 360
Query: 349 IFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKRSTI 407
+ RE+ L++ RA+++T+G + + FYV D +G VD K I+ +R QIG T L VK+
Sbjct: 361 VLREHGLTVTRADVATVGEQAMNVFYVRDASGQTVDMKTIEGLRGQIGQTVMLNVKKVPA 420
Query: 408 LAPKPPKE-----TTTGFF-LGNFF 426
A KPP+ TGFF G+ F
Sbjct: 421 PAVKPPEPARGGVAKTGFFSFGSLF 445
>gi|115474541|ref|NP_001060867.1| Os08g0118100 [Oryza sativa Japonica Group]
gi|42407901|dbj|BAD09041.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725644|dbj|BAD33111.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113622836|dbj|BAF22781.1| Os08g0118100 [Oryza sativa Japonica Group]
Length = 441
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/453 (47%), Positives = 282/453 (62%), Gaps = 30/453 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L ++LRG A ++ + + ERRLHQ+M DRD E + S P
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE---ERAAAAAAASPTPA 229
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
V+V + E+ Y+V+T++ +DRPKLLFD+VCTLTDM YVVFHG ++T +A+QEFYIRH
Sbjct: 230 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHA 289
Query: 301 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 360
DG PISSEAER RV QCL+ AIERR+ EG+ LELCT DR LLSD+TR FREN L + +A
Sbjct: 290 DGSPISSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQA 349
Query: 361 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPPKETT 417
E+ST G + FYVTD G+ V+ ID++R+++G L + R + P++
Sbjct: 350 EVSTKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAV 409
Query: 418 TG---------FFLGNFFKARTFQTFKLIRSYS 441
G F+LGNF K R + LI+S S
Sbjct: 410 DGNGGGGGIGLFYLGNFVK-RNLVSLGLIKSCS 441
>gi|296082058|emb|CBI21063.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 277/445 (62%), Gaps = 32/445 (7%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D E+ +L R+ P RV IDN + D T++KV+S+NK GILL+V++VL D+NL I K+
Sbjct: 12 FDPEFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKS 71
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---PTEE 115
YISSD GWFM VF+V D G K+ D+ VI+YIQQ + T SL V+ P E
Sbjct: 72 YISSDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASE 131
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE +G DRPGLFSE+ A LADL N+V A WTHN+R A V ++TD ST I+DP
Sbjct: 132 HTAIEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPH 191
Query: 176 RLSTIKELLFNVLRG-------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE---- 224
RL+ I+ L VL + + + A + ERRLHQ+M D+E
Sbjct: 192 RLAKIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSA 251
Query: 225 ----RVEKAVGRVED--KSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
E +G ED + S+ V++ + E+ Y+++++ KDR +L+FD+VCT+TDMQY
Sbjct: 252 PTTSSSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQY 311
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTE 337
++FHG + A QE++IRH+DG ++SE E+E V++CLEAAIERR EG+ LELC
Sbjct: 312 LIFHGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCAN 371
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD---------PKII 388
+R+GLLSDITR+ REN L++ RA++ T G K + FYV D++GN VD K I
Sbjct: 372 NRLGLLSDITRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFI 431
Query: 389 DSIRRQIGHTKLQVKRSTILAPKPP 413
+S+++++G L VK+ +P P
Sbjct: 432 ESVKKEMGPIDLAVKKEITSSPSSP 456
>gi|302760087|ref|XP_002963466.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
gi|300168734|gb|EFJ35337.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
Length = 503
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/485 (43%), Positives = 295/485 (60%), Gaps = 53/485 (10%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L +NPPRVVI+N ATVIK+DSVN+HGILL+V+QVL D++L I KAY+
Sbjct: 13 FDPEYESLNASLNPPRVVIENAAFTGATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYV 72
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL---------------- 104
SSD GWFMDVF+V D DG KI D+EV+ +IQ+ LE A+ P +
Sbjct: 73 SSDAGWFMDVFHVTDIDGNKITDEEVLKFIQESLEKKAAEMPWIGSKCSNPSKVCSAEGG 132
Query: 105 ---RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
R S+G P +HT+IE +G +RPGL SEV + L+ ++CNV +A +WTHN R A ++
Sbjct: 133 EITRVSLGTGP-HQHTAIELSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIF 191
Query: 162 VTDH-STGYAIKDPKRLSTIKELLFNVLRGYDDFR---KAKTSLSPPGIMNRERRLHQIM 217
V + S+G I+D +L IK+ L V+R D R +T+ G+ + ERRLHQ+M
Sbjct: 192 VDNACSSGGPIEDCDKLKDIKDRLCRVIRANDGERGGGAGRTAEFFSGLTHMERRLHQMM 251
Query: 218 FDDRDYERVEKAV-GRVEDKS--------SRPQVTVLN-IEKDYTVITMRSKDRPKLLFD 267
D D+ + + GR+ D++ RP VT+ N +E+ Y+V+ + +DR KLLFD
Sbjct: 252 SADEDHCGESRELEGRLCDETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLLFD 311
Query: 268 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VCTLTDM Y++FH + + AYQEFYIRH DG + ++ ER+R+I+ L AAI+RR
Sbjct: 312 TVCTLTDMDYMIFHATILSEGYFAYQEFYIRHTDGCTLETDDERQRLIKRLVAAIQRRFP 371
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD-VTGNPVDP 385
EGL LELCT DRVGLLSD+T++F + L + RA IST G V +TFYVTD +G+ VD
Sbjct: 372 EGLRLELCTYDRVGLLSDVTKVFHRHGLCVTRAYISTTRAGTVANTFYVTDAASGDAVDM 431
Query: 386 KIIDSIRRQIGHTKLQVKRSTIL--------APKPPKETTTGFFLGNFFK---ARTFQTF 434
+ +++IR ++G L V+ + + +P P F L FFK R +
Sbjct: 432 RTVEAIREELGQAMLNVRSAPVCPQLLGLDDSPSPR------FSLAAFFKLHSERILYSL 485
Query: 435 KLIRS 439
LI S
Sbjct: 486 GLITS 490
>gi|359476144|ref|XP_003631797.1| PREDICTED: uncharacterized protein LOC100852414 [Vitis vinifera]
Length = 481
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 277/445 (62%), Gaps = 32/445 (7%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D E+ +L R+ P RV IDN + D T++KV+S+NK GILL+V++VL D+NL I K+
Sbjct: 9 FDPEFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---PTEE 115
YISSD GWFM VF+V D G K+ D+ VI+YIQQ + T SL V+ P E
Sbjct: 69 YISSDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASE 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE +G DRPGLFSE+ A LADL N+V A WTHN+R A V ++TD ST I+DP
Sbjct: 129 HTAIEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPH 188
Query: 176 RLSTIKELLFNVLRG-------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE---- 224
RL+ I+ L VL + + + A + ERRLHQ+M D+E
Sbjct: 189 RLAKIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSA 248
Query: 225 ----RVEKAVGRVED--KSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
E +G ED + S+ V++ + E+ Y+++++ KDR +L+FD+VCT+TDMQY
Sbjct: 249 PTTSSSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQY 308
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTE 337
++FHG + A QE++IRH+DG ++SE E+E V++CLEAAIERR EG+ LELC
Sbjct: 309 LIFHGSTASHGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCAN 368
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD---------PKII 388
+R+GLLSDITR+ REN L++ RA++ T G K + FYV D++GN VD K I
Sbjct: 369 NRLGLLSDITRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFI 428
Query: 389 DSIRRQIGHTKLQVKRSTILAPKPP 413
+S+++++G L VK+ +P P
Sbjct: 429 ESVKKEMGPIDLAVKKEITSSPSSP 453
>gi|109676322|gb|ABG37643.1| unknown [Populus trichocarpa]
Length = 2224
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/433 (46%), Positives = 282/433 (65%), Gaps = 33/433 (7%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+ P RV IDN + D TV+KVDSVNK G+LL+V+QVL D+NL I K
Sbjct: 1747 FDPDFDSLPERIFGPTCRVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKG 1806
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP------ 112
YISSD GWFMDVF+V D GKK+RD+ VI+YIQQ + T PS ++
Sbjct: 1807 YISSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQAIGTTRESTPSPPNARAYTNNIFEAD 1866
Query: 113 -TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
+ EHT+IE +GTDRPGLFSE+ A LADL CN+V W+HN R A V +++D S+ I
Sbjct: 1867 HSSEHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPI 1926
Query: 172 KDPKRLSTIKELLFNVLRGYD----------DFRKAKTS--LSPPG-IMNRERRLHQIMF 218
+DP RL++I++ L VLR + R+ KT L G + N ERRLHQ+M
Sbjct: 1927 EDPHRLASIEDHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLML 1986
Query: 219 DDRDYE----RVEKAVGRVEDKS-SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTL 272
RD++ G +K S+ V++ N +K+Y+++ + KDR +L+FD +CTL
Sbjct: 1987 SVRDFDGPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTL 2046
Query: 273 TDMQYVVFHGMVNT---GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEG 329
DMQYV+FH V++ GR A+QE++IRH DG ++E+E+ERVI+CLEAAIERR SEG
Sbjct: 2047 NDMQYVIFHASVSSDHDGR--AFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSEG 2104
Query: 330 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
+ L+L E+R+GLLSDITR+ REN L++ RA+++T G K + FYV D++GN VD I
Sbjct: 2105 VLLKLRAENRLGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGNEVDMGFIK 2164
Query: 390 SIRRQIGHTKLQV 402
S+++++G T L+V
Sbjct: 2165 SMKKEMGLTDLEV 2177
>gi|15239390|ref|NP_197914.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332006043|gb|AED93426.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 500
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/426 (45%), Positives = 280/426 (65%), Gaps = 37/426 (8%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN++ D TV+KV+S NK G+LL+V+Q+L D+NL+I K+YISSDGGWFMDVF+V
Sbjct: 24 PCRVYIDNDSIQDCTVVKVNSENKQGLLLEVVQILTDMNLIITKSYISSDGGWFMDVFHV 83
Query: 74 IDCDGKKIRDKEVIDYIQQ-----RLETD---ASFAPSLRSSVGVMPTEEHTSIEFTGTD 125
D G K+ DK VI++I+ R E+D AS A + + EHT+IE TGTD
Sbjct: 84 KDEHGNKLTDKSVINHIKHAIGTSRRESDFIKASEANNNSLEPQLADHGEHTAIEMTGTD 143
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 185
RPGLFSE+ A ADLHCNV+ A W+HN R A + +V+D +T I DP RL++I++ L
Sbjct: 144 RPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSDDNTHTPIDDPSRLASIEDHLS 203
Query: 186 NVLRGYDDFRKAKTSLS-------------PPGIMNR--ERRLHQIMFDDRDYER----- 225
V+R D T + G MN ERRLHQ+M RD++
Sbjct: 204 TVIRATADPASNSTHVGHKENETDGFLAGQGKGCMNSNMERRLHQLMLSVRDFDEPFCEP 263
Query: 226 --VEKAVGRVE--DKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
+ ++E D R + T+++I E+ Y+++T++SKDR +L+FD +CTL DMQY
Sbjct: 264 SSLSLLSSKLEYCDHKER-KTTIVSIGNCEERGYSIVTVKSKDRRRLMFDTICTLVDMQY 322
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTE 337
V+FH + + +A+QE++IRH+DG +++E E+ERVI+CLEAAIERR EG++LELC E
Sbjct: 323 VIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERVIKCLEAAIERRVCEGVKLELCAE 382
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 397
+RVGLLSDITR+ REN L++ RA++ T G K + FYV D++GN +D + ++S+++++
Sbjct: 383 NRVGLLSDITRVLRENGLTVVRADVETQGQKSLNAFYVRDISGNKIDMEFVESVKKEMRP 442
Query: 398 TKLQVK 403
L+VK
Sbjct: 443 IHLEVK 448
>gi|218200397|gb|EEC82824.1| hypothetical protein OsI_27619 [Oryza sativa Indica Group]
Length = 433
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 275/439 (62%), Gaps = 29/439 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L ++LRG A ++ + + ERRLHQ+M DRD E + S P
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE---ERAAAAAAASPTPA 229
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
V+V + E+ Y+V+T++ +DRPKLLFD+VCTLTDM YVVFHG ++T +A+QEFYIRH
Sbjct: 230 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHA 289
Query: 301 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 360
DG PISSEAER RV QCL+ AIERR+ EG+ LELCT DR LLSD+TR FREN L + +A
Sbjct: 290 DGSPISSEAERHRVSQCLQYAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQA 349
Query: 361 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPPKETT 417
E+ST G + FYVTD G+ V+ ID++R+++G L + R + P++
Sbjct: 350 EVSTKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAV 409
Query: 418 TG---------FFLGNFFK 427
G F+LGNF K
Sbjct: 410 DGNGGGGGIGLFYLGNFVK 428
>gi|222639814|gb|EEE67946.1| hypothetical protein OsJ_25838 [Oryza sativa Japonica Group]
Length = 433
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 275/439 (62%), Gaps = 29/439 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L ++LRG A ++ + + ERRLHQ+M DRD E + S P
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE---ERAAAAAAASPTPA 229
Query: 242 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
V+V + E+ Y+V+T++ +DRPKLLFD+VCTLTDM YVVFHG ++T +A+QEFYIRH
Sbjct: 230 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHA 289
Query: 301 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 360
DG PISSEAER RV QCL+ AIERR+ EG+ LELCT DR LLSD+TR FREN L + +A
Sbjct: 290 DGSPISSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQA 349
Query: 361 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPPKETT 417
E+ST G + FYVTD G+ V+ ID++R+++G L + R + P++
Sbjct: 350 EVSTKGDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAV 409
Query: 418 TG---------FFLGNFFK 427
G F+LGNF K
Sbjct: 410 DGNGGGGGIGLFYLGNFVK 428
>gi|168034813|ref|XP_001769906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678812|gb|EDQ65266.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 196/399 (49%), Positives = 266/399 (66%), Gaps = 8/399 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D EY + ++PP+V+IDN++ +AT++KV S NKHG LL+V+Q L D++L I KAYI+
Sbjct: 11 DPEYDTMSSIIDPPKVMIDNDSEKNATLVKVSSQNKHGTLLEVVQELMDMDLTISKAYIT 70
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ-----QRLETDASFAPSLRSSVGVMPTEEH 116
SDGGWFMDVF+V D G KIRD+++I IQ Q+ + A F SVG EH
Sbjct: 71 SDGGWFMDVFHVTDQKGLKIRDEKLIGNIQKALSLQKKKWTAEFQKCPGRSVGTQTISEH 130
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE TGTDRPGL SEV AVLA++ C V AE+WTHN R A V++VTD T I++ ++
Sbjct: 131 TAIELTGTDRPGLLSEVTAVLAEMSCRVNAAEVWTHNRRVACVMYVTDEDTLGPIENVRK 190
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L I E L +++G DD + A+ S+ + ERRLHQ+M D D + K
Sbjct: 191 LERILEKLNPIMQGCDDEKVAR-SVVAESFTHVERRLHQLMLADHDSDPSVSQSQISSRK 249
Query: 237 SSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P +TV + EK+Y+V+ ++ DRPKLLFD VCTLTD++YVV H + + A QE+
Sbjct: 250 QKNPNITVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYAVQEY 309
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
+IR +DG + A + +V +CLEAAIERR+SEGL L LCT DR GLL+++TR FREN L
Sbjct: 310 HIRSMDGRTLDDPA-KAKVKRCLEAAIERRSSEGLRLYLCTTDRPGLLTEVTRTFRENGL 368
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 394
S+ RAE+ST G K +TFYVTDV G PVD K +++IR++
Sbjct: 369 SVTRAEVSTQGDKAVNTFYVTDVNGLPVDLKKVEAIRKE 407
>gi|297812735|ref|XP_002874251.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320088|gb|EFH50510.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 287/445 (64%), Gaps = 43/445 (9%)
Query: 1 MDDEYAKLIRRM-NPP-RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+ PP RV IDN++ D TV+KV+S NK G+LL+V+Q+L D+NL+I K+
Sbjct: 9 FDPDFDNLGERIYGPPCRVYIDNDSIIDCTVVKVNSENKQGLLLEVVQILTDMNLIITKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ-----RLETDASFAPSLRSSVGVMPT 113
YISSDGGWFMDVF+V D G K+ DK VI++I+ R E+D A ++
Sbjct: 69 YISSDGGWFMDVFHVKDEYGNKLTDKSVINHIKHAIGTSRRESDFIKASEAHNNPNNNSL 128
Query: 114 E-------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
E EHT+IE TGTDRPGLFSE+ A ADLHCNV+ A W+HN R A + +V+D +
Sbjct: 129 ESPLSDHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSDDN 188
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLS-------------PPGIMNR--ER 211
T I DP RL++I++ L V+R D T + G MN ER
Sbjct: 189 THTPIDDPSRLASIEDHLSTVIRATSDPASNSTHVGHKENETDGFLAGQGKGCMNSNVER 248
Query: 212 RLHQIMFDDRDYER-------VEKAVGRVE--DKSSRPQVTVLNI----EKDYTVITMRS 258
RLHQ+M RD++ + ++E D+ R + T+++I E+ Y+++T++S
Sbjct: 249 RLHQLMLSVRDFDEPFCEPSSLSLLSSKLEYCDQKER-KTTIVSIGNCEERGYSIVTVKS 307
Query: 259 KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
KDR +L+FD +CTL DMQYV+FH + + +A+QE++IRH+DG +++E E+ERVI+CL
Sbjct: 308 KDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERVIKCL 367
Query: 319 EAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 378
EAAIERR EG++LELC E+RVGLLSDITR+ REN L++ RA++ T G K + FYV D+
Sbjct: 368 EAAIERRVCEGVKLELCAENRVGLLSDITRVLRENGLTVVRADVETQGQKSLNAFYVRDI 427
Query: 379 TGNPVDPKIIDSIRRQIGHTKLQVK 403
+GN +D + ++S+++++ L+VK
Sbjct: 428 SGNKIDMEFVESVKKEMRPIHLEVK 452
>gi|168012723|ref|XP_001759051.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689750|gb|EDQ76120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 447
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/433 (45%), Positives = 273/433 (63%), Gaps = 16/433 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y NPP+V ++ +ATV+KV S N+HGILL V+QVL D++L I K+ I
Sbjct: 9 FDPDYETTFSSFNPPKVTVETEANENATVVKVYSANRHGILLNVVQVLTDLDLTITKSDI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET----DASFAPSLRSSVGVMPTEEH 116
D GWFMDVF+V+D +G K DK D+I + T A+ LR S G + EH
Sbjct: 69 FHDLGWFMDVFHVVDSNGNKTLDKRTCDHILKVRHTLPHSSAAAIYHLRRSTG-LTCSEH 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE TG DRPGL SE+ AVL L CNV AE+WTHN R A++++ D +TG I +
Sbjct: 128 TVIELTGPDRPGLLSEISAVLTRLECNVNGAEVWTHNQRVASIIYFNDINTGRPITAQSK 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L I+ L V++G D A+ + I + ERRLHQ+M+DDR E V G +
Sbjct: 188 LDHIRGQLSKVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRVNE-VPHVSG---N 243
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
RP + + E+ Y+V++++ KDR KLLFDIVCTLTDMQYV++H ++N+ E QEF
Sbjct: 244 PQQRPVIQIKRNERGYSVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPGPETSQEF 303
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
+IRHV+G + + A+ E + CLEAAI RR SEGL LELC DR+GLLSD+TR+FREN L
Sbjct: 304 FIRHVNGCTLDT-ADAEHLKVCLEAAINRRTSEGLRLELCMSDRIGLLSDVTRLFRENGL 362
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP-PK 414
S+ RA+I+T K + FYV D +G+PV+ +++++R+ +GH+ L+VK P+P P+
Sbjct: 363 SVARADITTRDDKAVNVFYVVDASGSPVNMNVVETMRKSLGHSILEVKG----LPRPEPE 418
Query: 415 ETTTGFFLGNFFK 427
++ LG F+
Sbjct: 419 LPSSKLSLGGLFR 431
>gi|449508537|ref|XP_004163340.1| PREDICTED: uncharacterized protein LOC101229243 [Cucumis sativus]
Length = 476
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/413 (46%), Positives = 271/413 (65%), Gaps = 22/413 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D + LI R+ PPRV IDN+T D T++KVDS NKHGILL+++QVL D++LVI K+YI
Sbjct: 11 VDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAPS---LRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D+ +I YI+Q L + +P + ++ + + EH
Sbjct: 71 SSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEH 130
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+ E TG DRPGL SE+ AVL +L CNV A WTH+ +AA+++++ + G IKD KR
Sbjct: 131 TAAEITGIDRPGLLSEIFAVLVELGCNVTAAVAWTHHKKAASIIYIEEGWNGGMIKDSKR 190
Query: 177 LSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L+ ++E L NV+ G + K + G + ERRLHQ+M+ + DYE+ R
Sbjct: 191 LAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQC-----RC 245
Query: 234 ED--KSSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
D KS + T ++ EK Y++I +RS+DRPKLLFD VC LTD+QYVVFH V+
Sbjct: 246 HDDSKSCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVS 305
Query: 286 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSD 345
+ T AYQE++IR G + SE+ER+R++Q L AAIERR S GL LELC +RVGLLSD
Sbjct: 306 SNGTVAYQEYFIRQKGGCILDSESERKRLLQALVAAIERRVSHGLRLELCALNRVGLLSD 365
Query: 346 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN--PVDPKIIDSIRRQIG 396
ITR+FREN SI ++ T G + + ++TD +G+ VDP I+D + ++IG
Sbjct: 366 ITRVFRENGFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIG 418
>gi|125582506|gb|EAZ23437.1| hypothetical protein OsJ_07127 [Oryza sativa Japonica Group]
Length = 610
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/425 (46%), Positives = 270/425 (63%), Gaps = 29/425 (6%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF 67
L++ + RV IDN+TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI+SDGGWF
Sbjct: 141 LLKEESTERVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWF 200
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTEEHTSIEF 121
MDVF+V+D G+K+ D++ I +I++ L D++ + SVG+ +HT+IE
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP RLS I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIMFDDRDYERVEKAV 230
L VLRG+ P + +RRLHQ+M D D + +
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLD 380
Query: 231 GRV---------EDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
R RP VTV + EKDY+V+ ++ +DR KLLFDIVCTLTDM YVV
Sbjct: 381 SRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVS 440
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 340
H V++ QE YIR DG + + E RVI+CLEAAI RR SEG LELC DRV
Sbjct: 441 HASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRDRV 499
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-K 399
GLLSD+TR+ RE+ L++ RA+++T+GG+ + FYV D +G PVD K I+ +R Q+GHT
Sbjct: 500 GLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVM 559
Query: 400 LQVKR 404
L VK+
Sbjct: 560 LNVKK 564
>gi|449451315|ref|XP_004143407.1| PREDICTED: uncharacterized protein LOC101215529 [Cucumis sativus]
Length = 476
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/408 (46%), Positives = 268/408 (65%), Gaps = 12/408 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D + LI R+ PPRV IDN+T D T++KVDS NKHGILL+++QVL D++LVI K+YI
Sbjct: 11 VDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAPS---LRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D+ +I YI+Q L + +P + ++ + + EH
Sbjct: 71 SSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEH 130
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+ E TG DRPGL SE+ AVL +L CN+ A WTH+ +AA+++++ + G IKD KR
Sbjct: 131 TAAEITGIDRPGLLSEIFAVLVELGCNITAAVAWTHHKKAASIIYIEEGWNGGMIKDSKR 190
Query: 177 LSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--RVEKAVG 231
L+ ++E L NV+ G + K + G + ERRLHQ+M+ + DYE R
Sbjct: 191 LAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQCRCHDDSK 250
Query: 232 RVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
+ +R V + + EK Y++I +RS+DRPKLLFD VC LTD+QYVVFH V++ T
Sbjct: 251 SCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVSSNGTV 310
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIF 350
AYQE++IR G + SE ER+R++Q L AAIERR S GL LELC +RVGLLSDITR+F
Sbjct: 311 AYQEYFIRQKGGCILDSECERKRLLQALVAAIERRVSHGLRLELCALNRVGLLSDITRVF 370
Query: 351 RENSLSIKRAEISTIGGKVKDTFYVTDVTGN--PVDPKIIDSIRRQIG 396
REN SI ++ T G + + ++TD +G+ VDP I+D + ++IG
Sbjct: 371 RENGFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIG 418
>gi|125539879|gb|EAY86274.1| hypothetical protein OsI_07644 [Oryza sativa Indica Group]
Length = 608
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 206/464 (44%), Positives = 280/464 (60%), Gaps = 46/464 (9%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF 67
L++ + RV IDN+TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI+SDGGWF
Sbjct: 141 LLKEESTERVCIDNSTCSDFTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWF 200
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTEEHTSIEF 121
MDVF+V+D G+K+ D++ I +I++ L D++ + SVG+ +HT+IE
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP RLS I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIMFDDRDYERVEKAV 230
L VLRG+ P + +RRLHQ+M D D + +
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLD 380
Query: 231 GRV---------EDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
R RP VTV + E KDY+V+ ++ +DR KLLFDIVCTLTDM YVV
Sbjct: 381 SRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVS 440
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 340
H V++ QE YIR DG + + E RVI+CLEAAI RR SEG LELC DRV
Sbjct: 441 HASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRDRV 499
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-K 399
GLLSD+TR+ RE+ L++ RA+++T+GG+ + FYV D +G PVD K I+ +R Q+GHT
Sbjct: 500 GLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVM 559
Query: 400 LQVKR----------STILAPKPPKETTTG-------FFLGNFF 426
L VK+ + K P + +G F GN F
Sbjct: 560 LNVKKVPSSPSSSSSAAAANGKSPGQPASGALSRTSFFSFGNLF 603
>gi|357163126|ref|XP_003579632.1| PREDICTED: uncharacterized protein LOC100841900 [Brachypodium
distachyon]
Length = 474
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 213/469 (45%), Positives = 299/469 (63%), Gaps = 33/469 (7%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+R MNPPRV IDN T I+VDSVN HG LL ++QV+ D+NLV++KAY ++
Sbjct: 8 DEYAKLVRGMNPPRVEIDNEISKIGTFIQVDSVNTHGTLLALVQVITDLNLVVRKAYFTA 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR-SSVGVMPTE------E 115
DG WFMDVF V D DG+K+ D+ ++YIQ LE+D + R +S ++P+E +
Sbjct: 68 DGDWFMDVFYVTDRDGEKVTDEATLNYIQTTLESDDCYYTEARDNSADIVPSESEEDSHQ 127
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DP 174
++SIE TGTDRPGL SEVCAVL+D+ C VV+A++WT N R AAVV V D +TG AI DP
Sbjct: 128 YSSIELTGTDRPGLLSEVCAVLSDVRCAVVSADLWTCNTRVAAVVQVADAATGVAISADP 187
Query: 175 KRLSTIKELLFNVL--RGYDDFRKAKTSLSPPGI--MNRERRLHQIMFDDRDYERVEKAV 230
R++ I L ++L R + A + P + M++ERRLHQ+M D + +E
Sbjct: 188 ARVAEISRRLAHLLRSRSWCHATVAASVAEEPSLVAMHKERRLHQLMAADPESGVIEGDG 247
Query: 231 GRVEDKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 286
++ TV+ + ++ YT + +R +D PKLLFD VCT+TD QYVV+HG V+T
Sbjct: 248 AYLQPAPGTTPATVVEVTDCAQRGYTFVVVRCRDVPKLLFDTVCTITDAQYVVYHGNVST 307
Query: 287 ---GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLL 343
G T AYQE+Y+R+ GL ++E ER + + LEAA+ERR ++G+ELE+ + DR GLL
Sbjct: 308 EPDGVT-AYQEYYVRNKAGLA-ATEPERLLLKRQLEAAVERRFADGIELEVRSGDRAGLL 365
Query: 344 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG--NPVDPKIIDSIRRQIGHTKLQ 401
SD+TRI REN L+I RA + + GG+ DTFYV+D G PV+P+ ID+IR QIG L+
Sbjct: 366 SDVTRIIRENGLTILRAGVKSQGGEAVDTFYVSDPMGLDYPVEPRTIDTIRAQIGEATLR 425
Query: 402 VKRSTILAPKPPKET---------TTGFFLGNFFK-ARTFQTFKLIRSY 440
VK++ ++ F LG+ +K R FQ+ L++ Y
Sbjct: 426 VKKNPFADADQQQQQHDAAASVVGAIAFILGSVYKFYRPFQSLALVKLY 474
>gi|356541590|ref|XP_003539257.1| PREDICTED: uncharacterized protein LOC100811109 [Glycine max]
Length = 459
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/451 (43%), Positives = 281/451 (62%), Gaps = 35/451 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L+ R++PPRV IDN++C D TV+KVDS N+ GILL+++QVL D++L+I K+YI
Sbjct: 9 IDREIESLLERIHPPRVCIDNDSCRDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVGVMPTE- 114
SSDGGW MDVF+V D GKK+ D+ ++ +IQQ L + + S L S G +
Sbjct: 69 SSDGGWCMDVFHVTDEAGKKLTDETLMLHIQQELCATRSKGEISRDTELASQKGAQAQQQ 128
Query: 115 ----EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E+T++E + TDR GL SE+ AVL +L +V +A WTHNDR A ++ + D S+
Sbjct: 129 NVAMENTALEMSVTDRAGLLSELSAVLVELGYSVTSATAWTHNDRVACIIFLEDASSPGP 188
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRK---AKTSLSPPGIMNRERRLHQIMFDDRDYE--- 224
I DPKRL ++E L NV+ + + + + + G + ERRLHQ+M+ DRDYE
Sbjct: 189 ISDPKRLGLVEEQLENVVAAHGETGQKNSVRVTTLGTGRTHTERRLHQLMYADRDYESCR 248
Query: 225 ---RVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 281
R +VGR EDK Y V+ +RS+DRPKLLFD VC LTDMQYVVFH
Sbjct: 249 ACDRTHVSVGRCEDKG-------------YLVVNVRSRDRPKLLFDTVCVLTDMQYVVFH 295
Query: 282 GMVNTGRTEAYQEFYIRHVDG-LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 340
+++ R+ A QE++IRH G L + SE+E E + CL AAIERR S GL +++ TE+R+
Sbjct: 296 AAISSKRSMADQEYFIRHCKGSLALPSESETEELTLCLIAAIERRVSRGLMVDIRTENRM 355
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL 400
GLLS++TR+FREN LSI R EI T G K +F+VTD +G V+P I++ +R+ G + +
Sbjct: 356 GLLSNVTRVFRENGLSISRFEIGTEGEKAVGSFFVTDSSGEQVNPNIVELVRQASGGSVV 415
Query: 401 QVKRST--ILAPKPPKETTTGFFLGNFFKAR 429
+S + + E F LG+ +R
Sbjct: 416 TDHKSPHRVRQSQSDIEAKPKFSLGSLLWSR 446
>gi|242080357|ref|XP_002444947.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
gi|241941297|gb|EES14442.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
Length = 443
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/415 (48%), Positives = 266/415 (64%), Gaps = 20/415 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNMPRVVIDNAICPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGT--WNEPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV--TDHSTGYAIKDPKRLSTI 180
G DR GL SEV AVLAD+ C+VV+A WTH R A VV + + ++G + D R++ I
Sbjct: 118 GPDRTGLLSEVFAVLADMQCSVVDARAWTHRGRLACVVFLRGEELASGASADDDDRVARI 177
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
L ++LRG + A ++ G+ + +R LHQ+M D D A + P
Sbjct: 178 LARLGHLLRGDGEAPGAVAAVPAAGVAHADRCLHQLMAADLDRAPSFPA------PALSP 231
Query: 241 QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V+V + E+ Y+V+T+ +DRPKLLFD+VCTL DM YVVFHG V+T A QEFYIR
Sbjct: 232 AVSVQSWAERGYSVVTVLCRDRPKLLFDVVCTLHDMDYVVFHGTVDTAGDRARQEFYIRR 291
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
DG PI SEAERER+ QCL+AAIERR+ EG+ LELCT DR GLLS++TR FREN L + +
Sbjct: 292 ADGSPIRSEAERERLNQCLQAAIERRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVVQ 351
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 414
AE+ST G + FYVTD G D ID++R ++G +L V P+PP+
Sbjct: 352 AEVSTKGDLASNVFYVTDAAGKAADQSAIDAVRERVGMDRLVVSEE----PRPPQ 402
>gi|357487957|ref|XP_003614266.1| ACR4 [Medicago truncatula]
gi|355515601|gb|AES97224.1| ACR4 [Medicago truncatula]
Length = 312
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 180/298 (60%), Positives = 224/298 (75%), Gaps = 6/298 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN +ATVI+VDS NK GILL+V+Q+L D+NL+I KAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI++ L ++ FA ++R SVGV T +HT+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G+DRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL G + R AKT ++ + +RRLHQ+MFDDRDYERV+ D+ RP
Sbjct: 196 KELLCNVLGGGNRKRGAKTVVTDDST-HTDRRLHQMMFDDRDYERVDDDDF---DEKQRP 251
Query: 241 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
V V+N +KDY+V+T+ +DRPKL+FD VCTLTDMQYVVFH ++ +AYQ + I
Sbjct: 252 NVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQVYII 309
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 394
+ ++ G+L ++ +I + +L I +A IS+ GG D F VTD GN V D I+D IR+
Sbjct: 50 SANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKS 109
Query: 395 IG 396
+G
Sbjct: 110 LG 111
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLT 273
Q + D +YE++ + + + P+V + N ++ TVI + S ++ +L ++V LT
Sbjct: 13 QSHYMDDEYEKLFR-------RMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILT 65
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ------CLEAAIE---- 323
D+ ++ +++ F + DG ++ E + + + C +
Sbjct: 66 DLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGV 125
Query: 324 RRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
++ + +EL DR GLLS+++ + +I AE+ T + +VTD
Sbjct: 126 KQTPDHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTD 179
>gi|242041567|ref|XP_002468178.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
gi|241922032|gb|EER95176.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
Length = 448
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/453 (44%), Positives = 268/453 (59%), Gaps = 30/453 (6%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL+ + L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKE-VIDYIQQRLETDA---SFAPSLRSSVGVMPTEEHTSI 119
G WFMDVF+V D G+K+ D + ++ ++ L DA P+ G P T +
Sbjct: 70 GRWFMDVFHVTDASGRKVADADALLARLESSLTADALPPRTPPAAAVGNGAGPAMP-TLL 128
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL DL C++ +A WTH R AA+V V D TG I D R+
Sbjct: 129 ELVGADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDVETGAPIDDAARVRR 188
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 239
++ L +VLRG A+ +N +RRLHQ++ +D G E ++ +
Sbjct: 189 VESRLRHVLRG--GALGARMVREDAAAVNMDRRLHQLLNED----------GEAECRADQ 236
Query: 240 PQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEF
Sbjct: 237 ADATAVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEF 296
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 355
YIR +DG PISS AER RVIQCL+AAIERRASEG+ LEL DR GLL+ +TR+FRENSL
Sbjct: 297 YIRRLDGRPISSAAERRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSL 356
Query: 356 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR-------STIL 408
S+ AEI+T G K + F+VTDV G P DPK ID + ++IG L+V ST
Sbjct: 357 SVTHAEITTRGDKAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEG 416
Query: 409 APKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
F LG+ K + + LIRS S
Sbjct: 417 DAGRGGGGAGIFSLGSLVK-KNLASLGLIRSCS 448
>gi|356497013|ref|XP_003517359.1| PREDICTED: uncharacterized protein LOC100781435 [Glycine max]
Length = 477
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 189/414 (45%), Positives = 275/414 (66%), Gaps = 20/414 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E LI R++PPRV I+N++C D TV+KVDS N+ GILL+++QVL D++L+I K+YI
Sbjct: 9 IDREIESLIERIHPPRVCIENDSCPDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--------ETDASFAPSLRSSVGVMP 112
SSDGGW MDVF+V D GKK+ D+ ++ +IQQ + +T+ + ++ +P
Sbjct: 69 SSDGGWCMDVFHVTDEAGKKLTDETLMLHIQQVIVSKREISRDTEMVSQKAPQAQQQNVP 128
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E+T++E + TDRPGL SE+ AVL +L C+V +A WTHNDR A ++ + D S+ I
Sbjct: 129 -KENTALEMSVTDRPGLLSELSAVLVELGCSVTSAMAWTHNDRVACIIFLEDASSPGPIS 187
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
DP+RL ++E L NV+ + + + K T+L G + ERRLHQ+M+ DRDYE
Sbjct: 188 DPERLGLVEEQLENVVAAHGETGQKKSVRVTTLG-TGRTHTERRLHQLMYADRDYESCRA 246
Query: 229 AVGRVEDKSSR----PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
G + + V+V E K Y V+ +RS+DRPKLLFD VC LTDMQYVVFH
Sbjct: 247 CDGDSSGEHKKGCDGTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAA 306
Query: 284 VNTGRTEAYQEFYIRHVDG-LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGL 342
+++ R+ A+QE++IR+ G L + SE E+E + CL AAIERR S GL +++ T++R+GL
Sbjct: 307 ISSKRSMAHQEYFIRNCKGSLALPSEREKEELTLCLIAAIERRVSHGLMVDIRTDNRMGL 366
Query: 343 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 396
LS++TR+FREN LSI R EI T G K +F+VTD +G V+P I++ +R+ G
Sbjct: 367 LSNVTRVFRENGLSISRFEIGTEGEKAVGSFFVTDSSGEEVNPDIVELVRQASG 420
>gi|108707164|gb|ABF94959.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|125860406|dbj|BAF46926.1| ACT-domain repeat protein 9 [Oryza sativa Japonica Group]
gi|215769363|dbj|BAH01592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/449 (45%), Positives = 265/449 (59%), Gaps = 28/449 (6%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+D+ CA AT+++V S KHG+LL+ + L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G WFMDVF+V D G+K+ D D + RLE+ S R++ G E T +E G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVG 126
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRPGL SEV AVL DL CN V A WTH R AA+V V D TG I D R+ I+
Sbjct: 127 ADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESR 186
Query: 184 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG R A+T L+ P N +RRLHQ++ +D G + + + P
Sbjct: 187 LRHVLRG--GARCARTVLADPSAAGNLDRRLHQLLKED----------GEADSRGAAPMT 234
Query: 243 TVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 235 AVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRR 294
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
DG PISSEAER+ VI+CL+AAIERRASEG+ LEL DR GLL+ +TR+FREN LS+
Sbjct: 295 SDGRPISSEAERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTH 354
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR-------STILAPKP 412
AEI+T + F+VTDV G P DPK ID + ++IG L+V S
Sbjct: 355 AEITTRDDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSAEGDAAG 414
Query: 413 PKETTTGFFLGNFFKARTFQTFKLIRSYS 441
F LG+ K F + LIRS S
Sbjct: 415 RGGGGGLFSLGSLVKKNLF-SLGLIRSCS 442
>gi|357113138|ref|XP_003558361.1| PREDICTED: uncharacterized protein LOC100843093 [Brachypodium
distachyon]
Length = 454
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 206/461 (44%), Positives = 275/461 (59%), Gaps = 40/461 (8%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN C AT+++V S K+G+LL+ + L+D + ++K YISSD
Sbjct: 10 YEHFVRHMNTPRVVVDNGVCETATLVQVHSARKNGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKE-VIDYIQQRLETDASFAPSLRSSVGV----MPTEEHTS 118
G WFMDVF+V D G+K+ D + ++ ++ L A+ A +L G E +
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADKLLARLESSLAAAAATADALPRPAGCDSSPAQNEGLSL 129
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E G DRPGL SEV AVL DL C++V+A+ WTH R AA+V V D TG I D R
Sbjct: 130 LELIGVDRPGLLSEVFAVLHDLRCSIVDAKAWTHGGRVAALVFVRDEDTGAPIDDAARTR 189
Query: 179 TIKELLFNVLRGYDDFRKAKTSL-SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
I+ L VLRG R A+T L + N +RRLHQ++ +DR+ A GR +
Sbjct: 190 RIESRLRYVLRG--GARGARTILVDAAAVGNLDRRLHQLLNEDRE------ADGR--PAA 239
Query: 238 SRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
RP T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A Q
Sbjct: 240 DRPTTTAVAVQEWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQ 299
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
EFYIR +DG PISS AER+RVIQ L+AAIERRASEG+ LEL +DR GLL+ +TR+FREN
Sbjct: 300 EFYIRRLDGQPISSAAERQRVIQRLQAAIERRASEGVRLELSIKDRRGLLAYVTRVFREN 359
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP 413
SLS+ AEI+T G K + F+VTDV G P DPK ID + IG L+V + P
Sbjct: 360 SLSVTHAEITTRGDKALNVFHVTDVAGRPADPKAIDEVIHGIGTESLRVDEE-----RWP 414
Query: 414 KETTTG-------------FFLGNFFKARTFQTFKLIRSYS 441
+ +T F LG+ K + LIRS S
Sbjct: 415 RLCSTQGDAGRDGGAGGGLFSLGSLVK-KNLYNLGLIRSCS 454
>gi|357482521|ref|XP_003611547.1| ACT domain-containing protein [Medicago truncatula]
gi|355512882|gb|AES94505.1| ACT domain-containing protein [Medicago truncatula]
Length = 486
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 265/419 (63%), Gaps = 25/419 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L R++P RV IDNNTC D TV+KVDS NK+GILL+++QVL D++L+I K+YI
Sbjct: 9 VDREIETLTERLHPARVCIDNNTCKDCTVVKVDSANKYGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ--------------QRLETDASFAPSLRS 106
SSDGGWFMDVF+V D GKK+ D+ ++ I+ + L+ A ++ S S
Sbjct: 69 SSDGGWFMDVFHVTDQAGKKLTDRNLMHQIEKELCATRAKEDIDDEELQGCAEYSQSKYS 128
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + E+T++E +G DRPGL SE+ AVL ++ CNV +A WTHN R A +++V + S
Sbjct: 129 KQIV--STENTALEMSGMDRPGLLSEISAVLVNMSCNVTSATAWTHNGRVACILYVEEAS 186
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY---DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
I+DP+RL+ +KE L +V+ + + + G + ERRLHQ+M+ DRDY
Sbjct: 187 KPGPIRDPRRLAQVKEQLESVVVAHCEKGERNNVRLRNFAAGRTHTERRLHQLMYADRDY 246
Query: 224 ERVEKAVGRVE-DKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
E G D T ++I ++ Y V+ + +DRPKL FD VC L DMQYV
Sbjct: 247 EGCRACHGDSSGDHKKGCDGTHVSISRCKDRGYWVVNLVCRDRPKLFFDTVCVLRDMQYV 306
Query: 279 VFHGMVNTGRTEAYQEFYIRH-VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTE 337
VFH +++ ++ A QE+YIRH +GL + +++ERE++I C+ AAIERR S GL +++CTE
Sbjct: 307 VFHAAISSKKSIADQEYYIRHKWNGLALRTQSEREKLILCIIAAIERRVSHGLRVDICTE 366
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 396
++ GLLS +TR+ REN LSI R EI G V TFYV D +G V P I++ +R++ G
Sbjct: 367 NKTGLLSKVTRVIRENGLSIPRVEIGMRGDDVVGTFYVRDPSGQEVKPNIVELLRQECG 425
>gi|414865819|tpg|DAA44376.1| TPA: ACR8 [Zea mays]
Length = 440
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 198/450 (44%), Positives = 266/450 (59%), Gaps = 32/450 (7%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL+ + L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYI---QQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
G WFMDVF+V D G+K+ D + + + L DA + ++ PT +E
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADADALLARLESSLSADALPPRTPPAAAAGTPT----LLE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G DRPGL SEV AVL DL C++ +A WTH R AA+V V D TG I D R+ +
Sbjct: 126 LVGADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDEDTGAPIDDAARVRRV 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
+ L +VLRG A+ + +N +RRLHQ++ +D + E S
Sbjct: 186 ESRLRHVLRG--GALGARMVRADAAAVNMDRRLHQLLNEDGEAE------------SRAD 231
Query: 241 QVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
Q T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFY
Sbjct: 232 QATAVAVQDWGERGYSVLTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFY 291
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 356
IR +DG PISS AER RVIQCL+AAIERRASEG+ LEL DR GLL+ +TR+FRENSLS
Sbjct: 292 IRRLDGRPISSAAERRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLS 351
Query: 357 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK-----RSTILAPK 411
+ AEI+T G + F+VTDV G P DPK ID + ++IG L+V R +
Sbjct: 352 VTHAEITTRGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCLTEGD 411
Query: 412 PPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
+ F LG+ K + + LIRS S
Sbjct: 412 AGRGGAGIFSLGSLVK-KNLASLGLIRSCS 440
>gi|413941729|gb|AFW74378.1| hypothetical protein ZEAMMB73_033208 [Zea mays]
Length = 443
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/414 (46%), Positives = 247/414 (59%), Gaps = 16/414 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L T A + P E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAA-------APPEGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G R GL SEV AVLAD+ C V +A W H R A V H+ R+S I
Sbjct: 118 GPGRAGLLSEVFAVLADMQCGVADARAWAHRGRLACVAHLRADDP-ADGDGDGRVSRILA 176
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
L ++LRG A ++ G+ + +RRLHQ+M D R V +
Sbjct: 177 RLSHLLRGDGVVAPGAVAAVPASGVAHADRRLHQLM--SADLHRAAPVPVPVPALAPAVS 234
Query: 242 VTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
V E+ Y+V+T++ DRPKLLFD+ CTL DM YVVFHG V+T A QEFYIR D
Sbjct: 235 VQSWA-ERGYSVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRARQEFYIRRAD 293
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PI SEAERE + L+AAIERR+ EG+ LELC DR GLLS++TR FREN L + +AE
Sbjct: 294 GSPIRSEAEREMLTHHLQAAIERRSLEGVRLELCAPDRAGLLSEVTRTFRENGLLVAQAE 353
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 415
+ST G + + FYVTD G D ID++R ++G +L V P+PP++
Sbjct: 354 VSTKGDQACNVFYVTDAAGKAPDRGAIDAVRERVGADRLVVSEE----PRPPQQ 403
>gi|357148614|ref|XP_003574833.1| PREDICTED: uncharacterized protein LOC100821029 [Brachypodium
distachyon]
Length = 472
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 211/463 (45%), Positives = 283/463 (61%), Gaps = 29/463 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DE+ KL+ RMNPPRV +DN + AT++KVDS NK+G LL+V+QVL D+ L I +AYISS
Sbjct: 15 DEFEKLVIRMNPPRVTVDNESDITATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISS 74
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMPTEEHTSIE 120
DG WFMDVF+V+D +G K+ D +VID I+Q L + SF A + + T+IE
Sbjct: 75 DGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRATDAETETAAAAMAQATAIE 134
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK---DPKRL 177
G DRPGL SEV AVL +L CN+ ++E+WTH+ R AA+V VTD TG I+ DP+RL
Sbjct: 135 LVGRDRPGLLSEVFAVLTNLRCNIASSEVWTHDGRMAALVRVTDADTGAGIEEDDDPERL 194
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD-RDYERVEKAVGRVEDK 236
T+K LL +VLRG +A P G ++ RRLHQ+M D R A E+
Sbjct: 195 DTVKRLLRHVLRG-----RAAVQARPGGALHAHRRLHQMMSADLRSRAAAAGAGDEEEED 249
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
V V E+ YTV+ +R +DR KLLFD VCTLTDMQYVVFHG V +EAYQEF
Sbjct: 250 CEGVVVGVEECAERGYTVVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEF 309
Query: 296 YIRHVDGLPISSEAERERVI--QCLEAAIERRASEG-LELELCTEDRVGLLSDITRIFRE 352
YIRH+D +S + +R +CL+AAI+RR +EG + LEL EDR GLLSD+TR+FRE
Sbjct: 310 YIRHLDDGAAASASAADRARLRRCLQAAIQRRNTEGVVGLELRCEDRPGLLSDVTRVFRE 369
Query: 353 NSLSIKRAEISTIGGKVKDTFYVTDVTGN-PVDPKIIDSIRRQIGHTKLQVKRSTILA-- 409
+ LS+ AE++T G + D F V +G+ PV + +D++R ++G L +K T+ A
Sbjct: 370 HGLSVTHAEVATWGTQAADVFRVVTASGDAPVPARAVDAVRAEVGEDILFIKDDTLAASA 429
Query: 410 --------PKPPKETTTGFFLGNFFKARTFQ---TFKLIRSYS 441
P LGN ++R+ + LIRS S
Sbjct: 430 NAVGGPVSPTGRGGGDGRRSLGNMIRSRSEKFLFNLGLIRSCS 472
>gi|195639256|gb|ACG39096.1| ACR8 [Zea mays]
Length = 450
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 197/450 (43%), Positives = 259/450 (57%), Gaps = 22/450 (4%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL + L+D + ++K YISSB
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLBAVXALSDHGVCVRKGYISSBD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI-EFT 122
G WFMDVF+V+D G K+ D + RLE+ S ++ E
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAAGAGTPTLLELV 126
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++
Sbjct: 127 GADRPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVES 186
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG A+ + +N +RRLHQ++ +D + R E ++ P
Sbjct: 187 RLRHVLRG--GALGARMVRADASAVNMDRRLHQLLNEDGE---AGSRADRAESEAEAPTP 241
Query: 243 TVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 242 TAVAVQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIR 301
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
+D PISS ER RVIQCLEAAIERRASEG+ LEL DR GLL+ +TR+FRENSLS+
Sbjct: 302 RLDERPISSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVT 361
Query: 359 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR-------STILAPK 411
AEI+T G + F+VTDV G P DPK ID + ++IG L+V ST
Sbjct: 362 HAEITTRGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGDAG 421
Query: 412 PPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
F LG+ K + + LIRS S
Sbjct: 422 RGGGGAGIFSLGSLVK-KNLVSLGLIRSCS 450
>gi|413921426|gb|AFW61358.1| ACR8 [Zea mays]
Length = 432
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/413 (46%), Positives = 252/413 (61%), Gaps = 26/413 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVVRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGTWNE--PARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLADL C VV+A WTH R A V + D R++ I
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLRGEG------DADRVARILA 171
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +++RG + A ++ + + +RRLHQ+M D + V +S
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHQLMAADHNNSATPYPAAAVSVQSW---- 227
Query: 243 TVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVD 301
E+ Y+V+T++ +DRPKLLFD+VC L + YVVFHG V+T + A QEFYI D
Sbjct: 228 ----AERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRARQEFYICSAD 283
Query: 302 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361
G PI SEAERER+ QCL+AAI+RR+ EG+ LELCT DR GLLS++TR FREN L + AE
Sbjct: 284 GSPIRSEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVAHAE 343
Query: 362 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 414
+ST GG + FYVTD G I+++R ++G L V P+PP+
Sbjct: 344 VSTKGGLASNVFYVTDADGKAAGQSAIEAVRARVGADCLVVGEE----PRPPR 392
>gi|357139522|ref|XP_003571330.1| PREDICTED: uncharacterized protein LOC100825212 [Brachypodium
distachyon]
Length = 456
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 207/467 (44%), Positives = 276/467 (59%), Gaps = 43/467 (9%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKV-------DSVNKHGILLQVIQVLNDVNLVI 55
+EY KL+ RM+ P+VVIDN C AT+++V DS G+LL+ +QVL D++L I
Sbjct: 5 NEYEKLVIRMDTPKVVIDNAACPTATLVQVRLPSTSVDSARNRGVLLEAVQVLADLDLSI 64
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT-- 113
KAYISSDG WFMDVF+V D G+K+ D VI YIQQ L + VG+ P+
Sbjct: 65 NKAYISSDGRWFMDVFHVTDRRGRKLTDHSVISYIQQSLA-------AWNGPVGIDPSAS 117
Query: 114 ----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E T +E TG DR GL SEV AVLAD+ C VV+A W+H R A +V++ D
Sbjct: 118 AAGMEGLTVLELTGADRTGLISEVFAVLADMGCGVVDARAWSHRGRLACLVYLRDADVAA 177
Query: 170 AIKDPKRLSTIKELLFNVLRGY---DDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYE 224
A + I+ L +LRG + F + + P + + +RRLHQ+M E
Sbjct: 178 AGA-----ARIEARLTPLLRGAAAAEPFSDSSVVAAVPACSVSHPDRRLHQLMHAAAARE 232
Query: 225 RVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
++ E + P V+V + E+ Y+V+T++ DRPKLL+D+VCTLTDM YVVFHG
Sbjct: 233 HDDRRASPSE--ADTPSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVVFHGT 290
Query: 284 VNTGRTE-AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGL 342
V+T + A QEFYIR DG PISS+AE RV CL+ AIERR+ EG+ LELCT DR GL
Sbjct: 291 VDTSASGGARQEFYIRSADGSPISSDAEMRRVSLCLQDAIERRSFEGVRLELCTPDRPGL 350
Query: 343 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT-GNPVDPKIIDSIRRQIGHTKLQ 401
LSD+TR FREN L + +AE+ST G + FYVT T G V ID++R ++G L
Sbjct: 351 LSDVTRTFRENGLLVAQAEVSTKGDMASNVFYVTGTTAGQAVHRSAIDAVREKVGVDSLV 410
Query: 402 V-KRSTILAPKP--PKETTTG----FFLGNFFKARTFQTFKLIRSYS 441
V +R L K P + + G F+LGN FK R + LI+S+S
Sbjct: 411 VEERPPQLHQKETRPADRSDGGLGLFYLGNLFK-RNLYSLGLIKSFS 456
>gi|226510421|ref|NP_001151985.1| ACR8 [Zea mays]
gi|195651513|gb|ACG45224.1| ACR8 [Zea mays]
Length = 433
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 193/420 (45%), Positives = 254/420 (60%), Gaps = 38/420 (9%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L + R + E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQSL---GXWNEPARPAA----LEGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLADL C VV+A WTH R A V + G D R++ I
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLR----GEGXAD--RVARILA 171
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP-- 240
L +++RG + A ++ + + +RRLH++M D + S+ P
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHELMAAD-------------HNNSATPYP 218
Query: 241 ----QVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQE 294
V+V + E+ Y+V+T++ +DRPKLLFD+VC L + YVVFHG V+T + QE
Sbjct: 219 AAAAAVSVQSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRXXQE 278
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
FYIR DG PI SEAERER+ QCL+AAI+RR+ EG+ LELCT DR GLLS++TR FREN
Sbjct: 279 FYIRSADGSPIRSEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENG 338
Query: 355 LSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 414
L + AE+ST GG + FYVTD G ID++R ++G L V P+PP+
Sbjct: 339 LLVAHAEVSTKGGLASNVFYVTDADGKAAGQSAIDAVRARVGADCLVVGEE----PRPPR 394
>gi|15239186|ref|NP_201390.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|13430688|gb|AAK25966.1|AF360256_1 putative uridylyl transferases [Arabidopsis thaliana]
gi|9759573|dbj|BAB11136.1| uridylyl transferases-like [Arabidopsis thaliana]
gi|14532892|gb|AAK64128.1| putative uridylyl transferases [Arabidopsis thaliana]
gi|22138094|gb|AAM93427.1| ACR1 [Arabidopsis thaliana]
gi|332010736|gb|AED98119.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 477
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/439 (40%), Positives = 265/439 (60%), Gaps = 23/439 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L+ R+NPPRV +DN++ + T+IKVDS NK+GILL ++QVL D++LVI K YI
Sbjct: 10 IDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVMPTE---- 114
SSDG WFMDVF+V D G K+ D+ +I YIQQ + + ++S++ +
Sbjct: 70 SSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVS 129
Query: 115 -EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I D
Sbjct: 130 TEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIID 189
Query: 174 PKRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
P R + +K+ L V+ + R + P G + ERRLH++M+ + DYE
Sbjct: 190 PIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYEN 249
Query: 226 V-------EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+V
Sbjct: 250 CFDCDCFGDRCDALWRGRCERIHVTIEAC-NGYSMVNVKCRDRPKLLFDTVCALKELQFV 308
Query: 279 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTED 338
VFH + + A QE++IR +G + +E +RER+ CL AAI RRAS+GL+LE+ TE+
Sbjct: 309 VFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIRTEN 368
Query: 339 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT 398
++GLLSD+TR+ REN LSI RAE+ T G +FYVTDV G P ++++ R++G
Sbjct: 369 KMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGGA 428
Query: 399 KLQVKRSTILAPKPPKETT 417
+ + + P+ T+
Sbjct: 429 VVSAVKGVGMMPRRIGSTS 447
>gi|297794201|ref|XP_002864985.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
gi|297310820|gb|EFH41244.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/439 (39%), Positives = 265/439 (60%), Gaps = 23/439 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L+ R+NPPRV +DN++ + T+IKVDS NK+GILL ++QVL D++LVI K YI
Sbjct: 10 IDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVMPTE---- 114
SSDG WFMDVF+V D G K+ D+ +I YIQQ + + ++S++ +
Sbjct: 70 SSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVS 129
Query: 115 -EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I D
Sbjct: 130 TEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIID 189
Query: 174 PKRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
P R + +K+ L V+ + R + +P G + ERRLH++M+ + DYE
Sbjct: 190 PIRKAQVKDHLDTVMEAHHRVGDVSHVVVRVVEAKGAPVGWAHTERRLHELMYGEGDYEN 249
Query: 226 V-------EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 278
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+V
Sbjct: 250 CFDCDCFGDRCDALWRGRCERIHVTIEAC-NGYSMVNVKCRDRPKLLFDTVCALKELQFV 308
Query: 279 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTED 338
VFH + + A QE++IR +G + +E +RER+ CL AAI RRAS GL+LE+ TE+
Sbjct: 309 VFHAVAGAKGSTAEQEYFIRKKNGCTLETEVQRERLRHCLVAAISRRASRGLKLEIRTEN 368
Query: 339 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT 398
++GLLSD+TR+ REN LSI RAE+ T G +FYVTDV G + ++++ R++G
Sbjct: 369 KMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETNANAVEAVVRELGGA 428
Query: 399 KLQVKRSTILAPKPPKETT 417
+ ++ + P T+
Sbjct: 429 VVSAVKAVGMVPTRMGSTS 447
>gi|242061954|ref|XP_002452266.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
gi|241932097|gb|EES05242.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
Length = 422
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/393 (46%), Positives = 249/393 (63%), Gaps = 31/393 (7%)
Query: 35 VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+NK+GILL+V+QVL+D++L I KAYI+SDGGWFMDVF+V+D G+KI D + I YI++ L
Sbjct: 1 MNKNGILLEVLQVLSDLDLHIFKAYITSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKAL 60
Query: 95 ETDASFAPSLRS-----SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 149
+++ S SVG+ +HT+IE G DR GL SE+ AVLADL CNV+ AE+
Sbjct: 61 GPESNLLCPKASNKQGRSVGLHSIGDHTAIELKGPDRTGLLSEIFAVLADLQCNVLAAEV 120
Query: 150 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR----------------GYDD 193
WTH R A VV+V D +TG AI DP R+S I+ L +VLR + +
Sbjct: 121 WTHRMRVACVVYVNDVATGLAIDDPGRVSRIENRLRHVLRGYGGGGGGNDDDDGSGAHAN 180
Query: 194 FRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIE-KDYT 252
F A S +P + +RRLHQ+M D D + RP+VTV + E K Y+
Sbjct: 181 FTDA--SSTPHHL---DRRLHQLMHADVDVAPAAALA--AGGQGDRPEVTVEHCEEKSYS 233
Query: 253 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERE 312
V+ ++ +DR KLLFDIVCTLTDM+YVVFH V++ QE YIR DG + + E E
Sbjct: 234 VVNVKCRDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIRRKDGKTLLKD-EAE 292
Query: 313 RVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDT 372
+VI+ LEAAI RR SEG LE+ DRVGLLSD+TR+ RE+ L++ RA+++T GG+ +
Sbjct: 293 KVIRSLEAAISRRVSEGFTLEVRGRDRVGLLSDVTRVLREHGLTVSRADVTTEGGQATNV 352
Query: 373 FYVTDVTGNPVDPKIIDSIRRQIGHTK-LQVKR 404
FYV D +G PVD K ++ +R Q G T L VK+
Sbjct: 353 FYVRDPSGQPVDMKTVEGLRGQFGQTAMLNVKK 385
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ +V+ V ++ +L ++ L D+ V+ A +SS+ + + +
Sbjct: 220 PEVTVEHCEEKSYSVVNVKCRDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIR 279
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DGK + E I+ SL +++ +E T +E G DR GL S+V
Sbjct: 280 RKDGKTLLKDEAEKVIR-----------SLEAAISRRVSEGFT-LEVRGRDRVGLLSDVT 327
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
VL + V A++ T +A V +V D S
Sbjct: 328 RVLREHGLTVSRADVTTEGGQATNVFYVRDPS 359
>gi|125543116|gb|EAY89255.1| hypothetical protein OsI_10752 [Oryza sativa Indica Group]
Length = 398
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/414 (44%), Positives = 241/414 (58%), Gaps = 28/414 (6%)
Query: 40 ILLQVIQVLNDVNLVIKKAYISSDGG-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA 98
+LL+ + L++ + ++K YISSD G WFMDVF+V D G+K+ D D + RLE+
Sbjct: 1 MLLEAVAALSEHGVCVRKGYISSDDGRWFMDVFHVTDAAGRKVADA---DALLARLESSL 57
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
S R++ G E T +E G DRPGL SEV AVL DL CN V A WTH R AA
Sbjct: 58 SAEALPRAAAGGPAAEGLTLLELVGADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAA 117
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIM 217
+V V D TG I D R+ I+ L +VLRG R A+T L+ P N +RRLHQ++
Sbjct: 118 LVFVRDEETGAPIDDAARVRRIESRLRHVLRG--GARCARTVLADPSAAGNLDRRLHQLL 175
Query: 218 FDDRDYERVEKAVGRVEDKSSRPQVTVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTD 274
+D G + + + P V E+ Y+V+T+ +DRPKLLFD+VCTLTD
Sbjct: 176 NED----------GEADSRGAAPMTAVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTD 225
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELEL 334
+ YVV+HG +T A QEFYIR DG PISSEAER+ VI+CL+AAIERRASEG+ LEL
Sbjct: 226 LDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAERQHVIRCLQAAIERRASEGVRLEL 285
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 394
DR GLL+ +TR+FREN LS+ AEI+T + F+VTDV G P DPK ID + ++
Sbjct: 286 RISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKTIDEVIQR 345
Query: 395 IGHTKLQVKR-------STILAPKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
IG L+V S F LG+ K F + LIRS S
Sbjct: 346 IGTESLRVDEERWPRLCSAEGDAAGRGGGGGLFSLGSLVKKNLF-SLGLIRSCS 398
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 203 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 262
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E +DR GL + V V + +
Sbjct: 263 QHVIRCLQAAIERRAS---------------EGVRLELRISDRRGLLAYVTRVFRENGLS 307
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +AEI T +D A V HVTD + A DPK TI E++
Sbjct: 308 VTHAEITTRDDMAMNVFHVTDVAGRPA--DPK---TIDEVI 343
>gi|356514354|ref|XP_003525871.1| PREDICTED: uncharacterized protein LOC100783892 [Glycine max]
Length = 481
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 178/435 (40%), Positives = 261/435 (60%), Gaps = 18/435 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E LI R++PPRV IDN++ D TV+K+DS N+HGILL+++QVL D++ VI K+YI
Sbjct: 9 IDREIESLIERIHPPRVCIDNDSSRDCTVVKIDSANRHGILLEMVQVLTDLDPVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE----- 115
SSDGGW MDVF+V D DG K+ D+ ++ YIQQ L S + + S + + E
Sbjct: 69 SSDGGWLMDVFHVTDHDGNKLTDRGLVHYIQQTLCEARSNSKEISSDIELTSCNEPPRLV 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+ +IE T ++ GLFSE+ AVL L NV +A WTHNDR A ++H+ D I + +
Sbjct: 129 NLAIELTTANQHGLFSEMSAVLLGLGFNVTSATAWTHNDRVACIIHLEDAKKLGPI-NAE 187
Query: 176 RLSTIKELLFNVLRGYD---DFRKAKTSLSP--PGIMNRERRLHQIMFDDRDYER----- 225
RL+ ++ L NV++ D + + + L G + ERRLHQ+M+ D DYER
Sbjct: 188 RLAQVQPELRNVVKARDRNGEEERVRLRLRSFGAGRNHTERRLHQMMYADGDYERCRACH 247
Query: 226 VEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
V G + QVTV EK Y V+ +RS+DRPKLLFD VC LTDMQY VFH V
Sbjct: 248 VGDRNGEKKKGCEETQVTVGRYEEKGYWVVNVRSRDRPKLLFDTVCVLTDMQYEVFHAAV 307
Query: 285 NTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLS 344
++ + A QE+++R + +E+E++++ CL AAIERR S GL++++ E+ GLLS
Sbjct: 308 SSNGSMADQEYFVRPKGSSNLDNESEKQKLSLCLIAAIERRVSHGLKVDIRAENTTGLLS 367
Query: 345 DITRIFRENSLSIKRAEISTIGGKVK-DTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 403
+TR+ REN LSI + +I ++ +F V + +G V+P I + +RR+ G + +
Sbjct: 368 KVTRVIRENGLSITKVQIGVESDEMAVGSFCVANSSGQEVNPNIAELVRRETGGSVVANY 427
Query: 404 RSTILAPKPPKETTT 418
S PK + T
Sbjct: 428 NSPYRVPKSLSSSKT 442
>gi|357140136|ref|XP_003571626.1| PREDICTED: uncharacterized protein LOC100823992 [Brachypodium
distachyon]
Length = 470
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 189/453 (41%), Positives = 269/453 (59%), Gaps = 25/453 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y L R+ RV +DN +C TV+KV+S NK +LL+V++VL D+ L I K Y+
Sbjct: 8 FDPDYENLNERIYGTRVHVDNESCGRCTVVKVNSRNKQDLLLEVLEVLIDLELSITKCYV 67
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS--VGVMP--TEEH 116
SSDGGW +DVF+V D +G K+ +K+ I YI+Q + T + ++R S P +
Sbjct: 68 SSDGGWSLDVFHVKDQEGSKVYNKKAISYIEQAICTREARRFTVRGSNEFASRPDVAAHY 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G +RPG+FSE+ AVLA+ CNV+ A W+H D A V V+D ST I D R
Sbjct: 128 TEIEMIGHNRPGIFSEISAVLAEEGCNVIEAHAWSHKDSLACVAFVSDESTSSPINDRNR 187
Query: 177 LSTIKELLFNVLRGY----DDFRKAKTSL-SPPGIMNR-ERRLHQIMFDDRDYERVEKAV 230
L+TI++ L VLR DD R A+ L G+ + ERRLHQ+MF RD++ V
Sbjct: 188 LATIEDHLGTVLRSGTSMDDDQRSARAHLLGVDGLTSHPERRLHQLMFASRDFDGQPGQV 247
Query: 231 ----------GRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
G +DKS+ + N EK Y+V+ + DRPKL+FD VCTLTDMQ+ VF
Sbjct: 248 STAFPMLSLDGYKKDKSTVVSLDRCN-EKGYSVVNVECVDRPKLMFDTVCTLTDMQFNVF 306
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDR- 339
H V++ A QE+YIRH DG + + E+ V++ L+AA+ERR EG++LELCTE +
Sbjct: 307 HASVSSQGPFACQEYYIRHKDGHMLDTADEKCLVVKGLKAAVERRTCEGVKLELCTEKKN 366
Query: 340 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTK 399
VG LS ITR+ RE+ L++ RA+I+ G K+TFYV D++GN +D ++S+RR++
Sbjct: 367 VGFLSHITRVLRESGLTVTRADIAMDGDVTKNTFYVKDISGNKIDMNAVESVRRELEPLP 426
Query: 400 LQVKRSTILAPKP---PKETTTGFFLGNFFKAR 429
QVK + P P GF + K++
Sbjct: 427 FQVKDELLSPGLPEGNPASERNGFCILGMLKSK 459
>gi|413956339|gb|AFW88988.1| hypothetical protein ZEAMMB73_242006 [Zea mays]
Length = 486
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 223/368 (60%), Gaps = 14/368 (3%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL + L+D + ++K YISSD
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLDAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI-EFT 122
G WFMDVF+V+D G K+ D + RLE+ S ++ E
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAAGAGTPTLLELV 126
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++
Sbjct: 127 GADRPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVES 186
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG A+ + +N +RRLHQ++ +D + R E ++ P
Sbjct: 187 RLRHVLRG--GALGARMVRADASAVNMDRRLHQLLNEDGE---AGSRADRAESEAEAPTP 241
Query: 243 TVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 242 TAVAVQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIR 301
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
+D PISS ER RVIQCLEAAIERRASEG+ LEL DR GLL+ +TR+FRENSLS+
Sbjct: 302 RLDERPISSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVT 361
Query: 359 RAEISTIG 366
AEI+T G
Sbjct: 362 HAEITTRG 369
>gi|357116994|ref|XP_003560261.1| PREDICTED: uncharacterized protein LOC100826395 [Brachypodium
distachyon]
Length = 506
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/461 (39%), Positives = 261/461 (56%), Gaps = 45/461 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ ++ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVG--VMP- 112
SSDGGW MDVF+V D G+K+ D + +IQQ L +P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPGFIQQALVPFQRRPGHGPSPKFTTCLGNVVGPG 128
Query: 113 ---TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ S+EFT DRPGL S + VL D C+V + + WTH+ RAA V++VT T
Sbjct: 129 GPDVSDCASLEFTVPDRPGLLSSITQVLVDQGCHVASGQSWTHSGRAAGVLYVT--MTAA 186
Query: 170 AIKDP---KRLSTIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRD 222
A P R + I+ L+ V+ + A+ S PG ++ ERRLHQ+M DDRD
Sbjct: 187 AEAQPPHQSRWAHIERLVSAVVDARESVSGARRWVCMSAPAPGRVHTERRLHQLMHDDRD 246
Query: 223 YERVEK---------AVGRVEDK---------------SSRPQVTVLNI-EKDYTVITMR 257
YE ++G V ++ +VT+ N E+ Y V+ M
Sbjct: 247 YESGPAPTPVDEEHFSMGDVRAATMMLMAARRSGARRGAADTRVTIDNWEERGYAVVKMT 306
Query: 258 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
S+DRPKLLFD VC LTDMQYVVFH V + A QE+YIRH DG + S AER++V +C
Sbjct: 307 SRDRPKLLFDTVCGLTDMQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRC 366
Query: 318 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
L AA+ERRAS G+ +E+ DR GLLSD TRI RE+ LS+ R E+ + TFY+
Sbjct: 367 LVAAVERRASHGVRVEVRAADRSGLLSDFTRILREHGLSLLRVELKRQKDEAVGTFYLVT 426
Query: 378 VTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 418
+G V P+++ ++R ++G + ++ + PP T+
Sbjct: 427 DSGGEVRPEVVRAVRARVGEMGISLEVAKEAPGWPPVRKTS 467
>gi|326518242|dbj|BAK07373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 265/486 (54%), Gaps = 49/486 (10%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ ++ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMP-- 112
SSDGGW MDVF+V D G K+ D + +IQQ L + + +P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGCKLTDPSLPGFIQQALLPFQRSGSGPSPKFTTCLGNVVGPGG 128
Query: 113 --TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ S+EFT DRPGL S + VL D C+V + + WTH+ RAA V++VT A
Sbjct: 129 PDVSDCASLEFTVHDRPGLLSSITQVLVDQGCHVASGQAWTHSGRAAGVLYVTATGADSA 188
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYE-- 224
P R + I+ L+ V+ ++ + +S P G ++ ERR+HQ+M DD DYE
Sbjct: 189 ALHPSRWARIERLVNAVVDARENMSGERRWVCMSAPVRGRVHTERRMHQLMHDDGDYESS 248
Query: 225 ---------------RVEKAVGRVEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDI 268
R A +R VT+ N E K Y ++ M S+DRPKLLFD
Sbjct: 249 PAPTPVDEEHFCMGDRAATAARSAHRTETR--VTIDNWEEKGYAIVKMTSRDRPKLLFDT 306
Query: 269 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
VC LTDM YVVFH V A QE+YIRH DG + S AER++V +CL AA+ERRAS
Sbjct: 307 VCALTDMHYVVFHATVGAQGPLAIQEYYIRHKDGRTVDSYAERQKVSRCLVAAVERRASH 366
Query: 329 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 388
G+ +E+ DR GLLSD TR RE+ LS+ R EI + TF++ TG V P+ +
Sbjct: 367 GVRVEVRAADRSGLLSDFTRALREHGLSLLRVEIKRQKEEAIGTFFLVTDTGGEVRPEAL 426
Query: 389 DSIRRQIGHTKLQ------------VKRSTILAPKPPKETTTGFFLGNFFKA---RTFQT 433
++R ++ + V+++ LAP P + + LG+ + +
Sbjct: 427 RAVRTRVAEMGISLDVAKEAFGWPPVRKTRALAPSPADQERPRYSLGSLLWSHLGKLSNN 486
Query: 434 FKLIRS 439
F IRS
Sbjct: 487 FGYIRS 492
>gi|297738125|emb|CBI27326.3| unnamed protein product [Vitis vinifera]
Length = 400
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/201 (70%), Positives = 167/201 (83%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN TC +A+VI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 7 MDDEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG KI D+E++DYIQ+ L +DA F S+R SVGV+P+ +HTSIE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIE 126
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL L C+VVNAE+WTHN RAAAV+HVTD TG AI DP+RLS +
Sbjct: 127 LTGSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKV 186
Query: 181 KELLFNVLRGYDDFRKAKTSL 201
K+LL NVL+G + R+AKT L
Sbjct: 187 KQLLCNVLKGSNKSREAKTLL 207
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 130/171 (76%)
Query: 257 RSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ 316
+S++ LLFD VCTLTDMQYVVFH V+ EAYQE+YIRH+DG P+ S+AER+RVIQ
Sbjct: 199 KSREAKTLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQ 258
Query: 317 CLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 376
CLEAAIERR SEGL+LELCT DRVGLLSD+TRIFRENSLS+ RAE++T GK +TF+V
Sbjct: 259 CLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTTRAGKAVNTFHVR 318
Query: 377 DVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFK 427
D +G PVD K IDSIR IG T LQVK S + P+E+ T F L F+
Sbjct: 319 DASGYPVDAKTIDSIREAIGQTILQVKGSPEEIKQIPQESPTRFLLVGLFR 369
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 40 ILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS 99
+L + L D+ V+ A + ++G + + DG ++ D +QR+
Sbjct: 206 LLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVKS----DAERQRVIQCLE 261
Query: 100 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
A R S G+ +E TDR GL S+V + + +V AE+ T +A
Sbjct: 262 AAIERRVSEGL-------KLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTTRAGKAVNT 314
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELL 184
HV D S GY + D K + +I+E +
Sbjct: 315 FHVRDAS-GYPV-DAKTIDSIREAI 337
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 394
+ ++ G+L ++ ++ + +L I +A IS+ GG D F VTD GN + D +I+D I++
Sbjct: 40 SANKHGILLEVVQVLIDLNLIITKAYISSDGGWFMDVFNVTDQDGNKITDEEILDYIQKS 99
Query: 395 IG 396
+G
Sbjct: 100 LG 101
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 249 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 308
K+ +VI + S ++ +L ++V L D+ ++ +++ F + DG I+ E
Sbjct: 31 KNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYISSDGGWFMDVFNVTDQDGNKITDE 90
Query: 309 AERERVIQ------CLEAAIERR-----ASEGLELELCTEDRVGLLSDITRIFRENSLSI 357
+ + + C +++ R +++ +EL DR GLLS+++ + S+
Sbjct: 91 EILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELTGSDRPGLLSEVSAVLTHLKCSV 150
Query: 358 KRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRR 393
AE+ T + +VTD TG + DP+ + +++
Sbjct: 151 VNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQ 188
>gi|28273389|gb|AAO38475.1| putative ACT domain containing protein [Oryza sativa Japonica
Group]
Length = 512
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 178/453 (39%), Positives = 257/453 (56%), Gaps = 35/453 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV--------G 109
SSDGGW MDVF+V D G+K+ D + ++IQ+ L + PS R + G
Sbjct: 69 SSDGGWLMDVFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLGNVVGPG 128
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT----DH 165
+ ++EFT DRPGL S + VLAD C+V + + WTH+ RAA V++VT
Sbjct: 129 GPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVTTAGGGA 188
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDR 221
+ A P R I+ L+ V+ + + S+S P G ++ ERRLHQ+M DDR
Sbjct: 189 AAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERRLHQLMHDDR 248
Query: 222 DYERVEKAVG------RVEDKSS------RPQVTVLNIE----KDYTVITMRSKDRPKLL 265
DYE A + DK++ R T ++IE + Y V+ M S+DRPKLL
Sbjct: 249 DYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKMTSRDRPKLL 308
Query: 266 FDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR 325
FD VC LTDM YVVFH V + A QE+YIRH DG + S AER++V +CL AA+ERR
Sbjct: 309 FDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCLVAAVERR 368
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
AS G ++E+ DR GLLSD TR+ RE+ LS+ R E+ + TFY+ G V
Sbjct: 369 ASHGAKVEVRAADRSGLLSDFTRMLREHGLSLLRVELKRRKDEAIGTFYLVTDAGGEVRA 428
Query: 386 KIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 418
+ + ++R ++G + + + PP T+
Sbjct: 429 EALHAVRARVGKVGISFEVAKDAPGWPPVRKTS 461
>gi|226508650|ref|NP_001145757.1| uncharacterized protein LOC100279264 [Zea mays]
gi|219884321|gb|ACL52535.1| unknown [Zea mays]
gi|413933158|gb|AFW67709.1| hypothetical protein ZEAMMB73_506779 [Zea mays]
Length = 494
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/452 (39%), Positives = 257/452 (56%), Gaps = 41/452 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R+ P VV+DN T D T++KVDSVN+ G+LL ++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLDRLGTPGVVVDNETREDCTLVKVDSVNRDGVLLDMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMPTE 114
SDGGW MDVF+V D G+K+ D + ++IQ+ L T +P + +G V P
Sbjct: 69 CSDGGWLMDVFHVTDRTGRKLTDPSLPEFIQRALVRFHRTVNCASPRFTTCLGNVVGPAG 128
Query: 115 EHTS----IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
S +EFT DRPGL S + +VLAD C+V + + WTHN RAA V++VT
Sbjct: 129 PDVSGCAALEFTVNDRPGLLSSITSVLADSGCHVASGQAWTHNGRAAGVLYVTP------ 182
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYER- 225
P R + ++ L+ V+ ++ + T +S P G ++ ERRLHQ+M DDRDYE
Sbjct: 183 -PLPSRWARVERLVEAVVGARENVAGERHWTRVSGPARGRVHTERRLHQLMRDDRDYESG 241
Query: 226 -----VEKAVGRVEDKSSRPQVTVLNI------------EKDYTVITMRSKDRPKLLFDI 268
V++ + V DK++ T E+ Y V+ M S+DRP LLFD
Sbjct: 242 PAPTPVDEGLFGVGDKAATTARTARRARAATRVSVDSWEERGYVVVKMTSRDRPSLLFDT 301
Query: 269 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
VC LTDMQYVVFH V + A QE+YIRH DG + S AER++V +CL AA+ERRA+
Sbjct: 302 VCALTDMQYVVFHATVGSQGVLAIQEYYIRHKDGGTVDSSAERQKVSRCLVAAVERRATH 361
Query: 329 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 388
G+ +E+ DR GLLSD TR+ RE+ LS+ R E+ + FY+ TG V + +
Sbjct: 362 GVRVEVHAADRSGLLSDFTRVLREHGLSLLRVELKRHRDEAFGVFYLDTDTGGEVRTEAL 421
Query: 389 DSIRRQIGHT--KLQVKRSTILAPKPPKETTT 418
+++ ++ L V + T PP T+
Sbjct: 422 RAVQMRVAEMGISLDVVKETKAPGWPPVRKTS 453
>gi|359497228|ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
vinifera]
Length = 338
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 153/326 (46%), Positives = 212/326 (65%), Gaps = 18/326 (5%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+ E TGTDRPGL SE+ AVLA+L C+V A WTHN R A ++ + D G I+DP+
Sbjct: 1 HTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPE 60
Query: 176 RLSTIKELLFNVLRG-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAVGR 232
RL ++E L NV+ + + K L+ P G + +RRLHQ+MF D+DYER G
Sbjct: 61 RLVHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER---CCGG 117
Query: 233 VEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
+ S R QV++ N EK Y+V+ ++S+DRPKLLFD VCTLTDMQYVVFH V++ + A
Sbjct: 118 CDGSSDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIA 177
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFR 351
QE++IR +DG + +E+ER RV QCL AAIERR + GL L++ ++R+GLLSDITR+FR
Sbjct: 178 VQEYFIRQMDGCTLGTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFR 237
Query: 352 ENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTI---L 408
EN LSI+ AEI G + +FYVTDV+G V P ++ IR++IG T + V +S++ L
Sbjct: 238 ENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSL 297
Query: 409 APKPPKETTTG--------FFLGNFF 426
P ++ +T F LG +
Sbjct: 298 PASPSRDRSTASSVENRPRFSLGTLW 323
>gi|222624567|gb|EEE58699.1| hypothetical protein OsJ_10135 [Oryza sativa Japonica Group]
Length = 369
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/390 (43%), Positives = 225/390 (57%), Gaps = 43/390 (11%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+D+ CA AT+++V S KHG+LL+ + L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G WFMDVF+V D G+K+ D D + RLE+ S R++ G E T +E G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVG 126
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRP F WTH R AA+V V D TG I D R+ I+
Sbjct: 127 ADRPASFRRA----------------WTHGGRVAALVFVRDEETGAPIDDAARVRRIESR 170
Query: 184 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG R A+T L+ P N +RRLHQ++ +D G + + + P
Sbjct: 171 LRHVLRG--GARCARTVLADPSAAGNLDRRLHQLLKED----------GEADSRGAAPMT 218
Query: 243 TVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 219 AVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRR 278
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
DG PISSEAER+ VI+CL+AAIERRASEG+ LEL DR GLL+ +TR+FREN LS+
Sbjct: 279 SDGRPISSEAERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTH 338
Query: 360 AEISTIGGKVKDTFYVTDVTGN--PVDPKI 387
AEI+T +D +T T P P I
Sbjct: 339 AEITT-----RDDMAMTSSTSPTWPAAPPI 363
>gi|242038257|ref|XP_002466523.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
gi|241920377|gb|EER93521.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
Length = 500
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 259/456 (56%), Gaps = 38/456 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVIYKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVG--VMP- 112
SSDGGW MDVF+V D G+K+ D + ++IQ+ L + P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPFHRPGNGPSPPRFTTCLGNVVGPG 128
Query: 113 ---TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ ++EFT DR GL S + +VL D C+V + + WTHN RAA V++VT +
Sbjct: 129 GPDVSDCAALEFTVHDRAGLLSSITSVLVDNGCHVASGQAWTHNGRAAGVLYVTTTAAAT 188
Query: 170 AIKD-------PKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMF 218
P R + I+ L+ V+ ++ + +S P G ++ ERRLHQ+M
Sbjct: 189 TADGAGAAALLPSRWARIERLVNAVVDARENVTGERHWVCVSEPVQGRVHTERRLHQLMH 248
Query: 219 DDRDYER------VEKAVGRVEDKSS------RPQVTVLNI----EKDYTVITMRSKDRP 262
DDRDYE V++ + + +K++ R VT ++I E+ Y V+ M S+DRP
Sbjct: 249 DDRDYESGPAPTPVDEELFSMGEKAATARTARRGAVTRVSIDSWEERGYAVVKMTSRDRP 308
Query: 263 KLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+LLFD VC LTDMQYVVFH V + A QE+YIRH DG + S AER++V +CL AA+
Sbjct: 309 RLLFDTVCALTDMQYVVFHATVGSQGALAIQEYYIRHKDGRTVDSSAERQKVSRCLVAAV 368
Query: 323 ERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP 382
ERRA+ G+ +E+ DR GLLSD TR+ RE+ LS+ R E+ FY+ TG
Sbjct: 369 ERRATHGVRVEVRAADRSGLLSDFTRVLREHGLSLLRVELKRHKDDAFGIFYLVTDTGGE 428
Query: 383 VDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 418
V + + +++ ++ + + PP T+
Sbjct: 429 VRAEALRAVQARVAEMDISLDVVKEAPGWPPVRKTS 464
>gi|145334915|ref|NP_001078803.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|332010737|gb|AED98120.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 425
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/396 (38%), Positives = 233/396 (58%), Gaps = 23/396 (5%)
Query: 44 VIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFA 101
++QVL D++LVI K YISSDG WFMDVF+V D G K+ D+ +I YIQQ + +
Sbjct: 1 MVQVLADLDLVISKCYISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGIT 60
Query: 102 PSLRSSVGVMPTE-----EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
++S++ + EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RA
Sbjct: 61 KEMQSNLKREVQQRHVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERA 120
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMN 208
A V+++ D G I DP R + +K+ L V+ + R + P G +
Sbjct: 121 AMVIYLEDGFNGGPIIDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAH 180
Query: 209 RERRLHQIMFDDRDYERV-------EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDR 261
ERRLH++M+ + DYE ++ + R VT+ Y+++ ++ +DR
Sbjct: 181 TERRLHELMYGEGDYENCFDCDCFGDRCDALWRGRCERIHVTIEAC-NGYSMVNVKCRDR 239
Query: 262 PKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 321
PKLLFD VC L ++Q+VVFH + + A QE++IR +G + +E +RER+ CL AA
Sbjct: 240 PKLLFDTVCALKELQFVVFHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAA 299
Query: 322 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
I RRAS+GL+LE+ TE+++GLLSD+TR+ REN LSI RAE+ T G +FYVTDV G
Sbjct: 300 ISRRASQGLKLEIRTENKMGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGG 359
Query: 382 PVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT 417
P ++++ R++G + + + P+ T+
Sbjct: 360 ETGPSEVEAVVRELGGAVVSAVKGVGMMPRRIGSTS 395
>gi|108707165|gb|ABF94960.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 538
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/329 (47%), Positives = 203/329 (61%), Gaps = 20/329 (6%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+D+ CA AT+++V S KHG+LL+ + L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G WFMDVF+V D G+K+ D D + RLE+ S R++ G E T +E G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVG 126
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRPGL SEV AVL DL CN V A WTH R AA+V V D TG I D R+ I+
Sbjct: 127 ADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESR 186
Query: 184 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L +VLRG R A+T L+ P N +RRLHQ++ +D G + + + P
Sbjct: 187 LRHVLRG--GARCARTVLADPSAAGNLDRRLHQLLKED----------GEADSRGAAPMT 234
Query: 243 TVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
V E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 235 AVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRR 294
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASE 328
DG PISSEAER+ VI+CL+AAIERRASE
Sbjct: 295 SDGRPISSEAERQHVIRCLQAAIERRASE 323
>gi|226491840|ref|NP_001142557.1| uncharacterized protein LOC100274815 [Zea mays]
gi|195606406|gb|ACG25033.1| hypothetical protein [Zea mays]
Length = 372
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 215/385 (55%), Gaps = 24/385 (6%)
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
MDVF+V+D G K+ D + RLE+ S T +E G DRP
Sbjct: 1 MDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAGAGTPTLLELVGADRP 57
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++ L +V
Sbjct: 58 GLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRHV 117
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 247
LRG A+ + +N +RRLHQ++ +D + G D++ P T + +
Sbjct: 118 LRG--GALGARMVRADAAAVNMDRRLHQLLNEDGE-------AGSRADQAEAPTPTAVAV 168
Query: 248 ----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR +D
Sbjct: 169 QDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDER 228
Query: 304 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 363
PISS ER RVIQCL+AAIERRASEG+ LEL DR GLL+ +TR+FRENSLS+ A I+
Sbjct: 229 PISSATERRRVIQCLQAAIERRASEGVRLELRINDRRGLLAYVTRVFRENSLSVTHAVIT 288
Query: 364 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR-------STILAPKPPKET 416
T G + F+VTDV G P DPK ID + ++IG L+V ST
Sbjct: 289 TRGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGDAGRGGGG 348
Query: 417 TTGFFLGNFFKARTFQTFKLIRSYS 441
F LG+ K + + LIRS S
Sbjct: 349 AGIFSLGSLVK-KNLVSLGLIRSCS 372
>gi|356565477|ref|XP_003550966.1| PREDICTED: uncharacterized protein LOC100797191 [Glycine max]
Length = 440
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 236/428 (55%), Gaps = 51/428 (11%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
E LI R+ PPRV IDN++ + TV+K+DS N+HGILL++ QVL D++LVI K+YISSD
Sbjct: 12 EIESLIERIYPPRVCIDNDSSRECTVVKIDSANRHGILLEMAQVLTDLDLVISKSYISSD 71
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE-----HTS 118
GGW MDVF+V D DG K+ D ++ YIQQ L S + S + + E + +
Sbjct: 72 GGWLMDVFHVTDQDGNKLTDVGLVHYIQQALCESRSSNKEISSDIELTSCNEPPRVVNLA 131
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE T TD+ G+FSE+ AVL L NV +A WTHNDR A ++H+ D + I + +RL+
Sbjct: 132 IELTTTDKHGMFSEISAVLLGLGFNVTSATAWTHNDRVACIIHLEDANKLGPI-NAERLA 190
Query: 179 TIKELLFNVLR------GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 232
++ L NV++ G DD + + G + ERRLHQ+M+ D DYER+ G
Sbjct: 191 QVQAQLQNVVKARDGKNGEDDRVRLRLRSFGGGRNHTERRLHQMMYADGDYERLRACHG- 249
Query: 233 VEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
E V+V E K Y V+ +RS+DRPKL FD VC LTDMQY VFH V++ + A
Sbjct: 250 -EKGCEGTNVSVGRYEVKGYWVVNVRSRDRPKLFFDTVCVLTDMQYEVFHAAVSSNGSMA 308
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFR 351
Q GL++++ E+ GLLS +TR+ R
Sbjct: 309 DQ-----------------------------------GLKVDIRAENTTGLLSKVTRVIR 333
Query: 352 ENSLSIKRAEISTIGGKVK-DTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP 410
EN LSI + +I G ++ +F+V + +G ++P I + +RRQIG + + S P
Sbjct: 334 ENGLSITKVQIGVEGDEMAVGSFHVANSSGQELNPNIAELVRRQIGGSVVANNNSPYRVP 393
Query: 411 KPPKETTT 418
K + T
Sbjct: 394 KSLSTSKT 401
>gi|255635655|gb|ACU18177.1| unknown [Glycine max]
Length = 245
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 186/243 (76%), Gaps = 3/243 (1%)
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQI 216
A+VV++TD +TG +I DP RL+ IK+LL VL+G D + A T++S G +++RRLHQ+
Sbjct: 2 ASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDIDKKSANTAVSV-GSTHKDRRLHQL 60
Query: 217 MFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDM 275
M+ DRDY+ + G D++ + VTV + I+K YTV+ +R DRPKLLFD VCTLTDM
Sbjct: 61 MYADRDYDVDDGDSGSTSDRN-KLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDM 119
Query: 276 QYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELC 335
QYVV+HG V EAYQE+YIRHVDG PISSEAER+RVI CLEAA+ RR SEG++LELC
Sbjct: 120 QYVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAERQRVIHCLEAAVRRRTSEGIKLELC 179
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 395
EDRVGLLSD+TRIFREN LS+ RAE++T G + + FYVTDV+GNPV + I+++R++I
Sbjct: 180 GEDRVGLLSDVTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVSGNPVKSETIETVRKEI 239
Query: 396 GHT 398
G T
Sbjct: 240 GLT 242
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 11/154 (7%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N V +D+ TV+ + ++ +L + L D+ V+ + ++G +
Sbjct: 81 NKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYY 140
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + +QR+ A R+S G+ +E G DR GL S+
Sbjct: 141 IRHVDGSPISSEAE----RQRVIHCLEAAVRRRTSEGI-------KLELCGEDRVGLLSD 189
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + + +V AE+ T +A V +VTD S
Sbjct: 190 VTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVS 223
>gi|115455115|ref|NP_001051158.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|108710889|gb|ABF98684.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549629|dbj|BAF13072.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|125587799|gb|EAZ28463.1| hypothetical protein OsJ_12444 [Oryza sativa Japonica Group]
Length = 551
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/492 (35%), Positives = 258/492 (52%), Gaps = 74/492 (15%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMD---------VFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV 108
SSDGGW MD +F+V D G+K+ D + ++IQ+ L + PS R +
Sbjct: 69 SSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTT 128
Query: 109 --------GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
G + ++EFT DRPGL S + VLAD C+V + + WTH+ RAA V+
Sbjct: 129 CLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVL 188
Query: 161 HVT----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERR 212
+VT + A P R I+ L+ V+ + + S+S P G ++ ERR
Sbjct: 189 YVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERR 248
Query: 213 LHQIMFDDRDYERVEKAVG------RVEDKSS------RPQVTVLNIE----KDYTVITM 256
LHQ+M DDRDYE A + DK++ R T ++IE + Y V+ M
Sbjct: 249 LHQLMHDDRDYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKM 308
Query: 257 RSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ 316
S+DRPKLLFD VC LTDM YVVFH V + A QE+YIRH DG + S AER++V +
Sbjct: 309 TSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSR 368
Query: 317 CLEAAIERRAS------------------------------EGLELELCTEDRVGLLSDI 346
CL AA+ERRAS +G ++E+ DR GLLSD
Sbjct: 369 CLVAAVERRASHVRLIIAILHFSPVGYSYARRHGRSLTMFPQGAKVEVRAADRSGLLSDF 428
Query: 347 TRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRST 406
TR+ RE+ LS+ R E+ + TFY+ G V + + ++R ++G + + +
Sbjct: 429 TRMLREHGLSLLRVELKRRKDEAIGTFYLVTDAGGEVRAEALHAVRARVGKVGISFEVAK 488
Query: 407 ILAPKPPKETTT 418
PP T+
Sbjct: 489 DAPGWPPVRKTS 500
>gi|125545602|gb|EAY91741.1| hypothetical protein OsI_13381 [Oryza sativa Indica Group]
Length = 551
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 177/492 (35%), Positives = 258/492 (52%), Gaps = 74/492 (15%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMD---------VFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV 108
SSDGGW MD +F+V D G+K+ D + ++IQ+ L + PS R +
Sbjct: 69 SSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTT 128
Query: 109 --------GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
G + ++EFT DRPGL S + VLAD C+V + + WTH+ RAA V+
Sbjct: 129 CLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVL 188
Query: 161 HVT----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERR 212
+VT + A P R I+ L+ V+ + + S+S P G ++ ERR
Sbjct: 189 YVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERR 248
Query: 213 LHQIMFDDRDYERVEKAVG------RVEDKSS------RPQVTVLNIE----KDYTVITM 256
LHQ+M DDRDYE A + DK++ R T ++IE + Y V+ M
Sbjct: 249 LHQLMHDDRDYESGPAATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKM 308
Query: 257 RSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ 316
S+DRPKLLFD VC LTDM YVVFH V + A QE+YIRH DG + S AER++V +
Sbjct: 309 TSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSR 368
Query: 317 CLEAAIERRAS------------------------------EGLELELCTEDRVGLLSDI 346
CL AA+ERRAS +G ++E+ DR GLLSD
Sbjct: 369 CLVAAVERRASHVRLIIAILHFSPVGYSYARRHGRSLTMFPQGAKVEVRAADRSGLLSDF 428
Query: 347 TRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRST 406
TR+ RE+ LS+ R E+ + TFY+ G V + + ++R ++G + + +
Sbjct: 429 TRMLREHGLSLLRVELKRRKDEAVGTFYLVTDAGGEVRAEALHAVRARVGKVGISFEVAK 488
Query: 407 ILAPKPPKETTT 418
PP T+
Sbjct: 489 DAPGWPPVRKTS 500
>gi|297742910|emb|CBI35746.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 200/312 (64%), Gaps = 18/312 (5%)
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
SE+ AVLA+L C+V A WTHN R A ++ + D G I+DP+RL ++E L NV+
Sbjct: 1 MSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLVHVEEQLENVVE 60
Query: 190 G-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 246
+ + K L+ P G + +RRLHQ+MF D+DYER G + S R QV++ N
Sbjct: 61 ARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER---CCGGCDGSSDRIQVSIEN 117
Query: 247 I-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 305
EK Y+V+ ++S+DRPKLLFD VCTLTDMQYVVFH V++ + A QE++IR +DG +
Sbjct: 118 CKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQMDGCTL 177
Query: 306 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 365
+E+ER RV QCL AAIERR + GL L++ ++R+GLLSDITR+FREN LSI+ AEI
Sbjct: 178 GTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLSIRMAEIGIH 237
Query: 366 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTI---LAPKPPKETTTG--- 419
G + +FYVTDV+G V P ++ IR++IG T + V +S++ L P ++ +T
Sbjct: 238 GERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASPSRDRSTASSV 297
Query: 420 -----FFLGNFF 426
F LG +
Sbjct: 298 ENRPRFSLGTLW 309
>gi|388512679|gb|AFK44401.1| unknown [Lotus japonicus]
Length = 224
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/227 (57%), Positives = 169/227 (74%), Gaps = 4/227 (1%)
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTD 274
+MF DRDYERV+ D+ RP VTV+N +KDY+V+T+ SKDRPKLLFD VCTLTD
Sbjct: 1 MMFADRDYERVDDDDF---DEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTD 57
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELEL 334
MQYVVFH ++ +AYQE+YIRH+DG P+ S+AER+RVIQCLEAAIERR SEGL+LEL
Sbjct: 58 MQYVVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLEL 117
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 394
CT DRVGLLS++TRIFRENSL++ RAE++T G K +TFYV+ +G VD K I+SIR+
Sbjct: 118 CTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGASGYLVDSKTIESIRQA 177
Query: 395 IGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
IG+T L+VK + +++ T FK+R+F F L++SYS
Sbjct: 178 IGNTILKVKGTPDELKSTHQDSPTRSLFSGLFKSRSFVNFGLVKSYS 224
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N + D +V+ + S ++ +L + L D+ V+ A I ++G + +
Sbjct: 22 PNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIR 81
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ A R S G+ +E TDR GL S V
Sbjct: 82 HIDGSPVKS----DAERQRVIQCLEAAIERRVSEGL-------KLELCTTDRVGLLSNVT 130
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T D+A +V+ S GY + D K + +I++ + N + +G
Sbjct: 131 RIFRENSLTVTRAEVTTKGDKAVNTFYVSGAS-GYLV-DSKTIESIRQAIGNTILKVKGT 188
Query: 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
D K+ SP R L +F R +
Sbjct: 189 PDELKSTHQDSPT------RSLFSGLFKSRSF 214
>gi|414872600|tpg|DAA51157.1| TPA: hypothetical protein ZEAMMB73_416104 [Zea mays]
Length = 390
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 214/354 (60%), Gaps = 30/354 (8%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YISSD
Sbjct: 12 DFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSD 71
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMPTEEHT 117
GGW MDVF+V D G+K+ D + ++IQ+ L +P + +G V P
Sbjct: 72 GGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCLGNVVGPGGPDV 131
Query: 118 S----IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
S +EFT DRPGL S + +VLAD C+V + + WTHN RAA V++VTD + G A+
Sbjct: 132 SGCAALEFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYVTDTAGGAALL- 190
Query: 174 PKRLSTIKELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYER---- 225
P R + I+ L+ V+ ++ + S G ++ ERRLHQ+M DDRDYE
Sbjct: 191 PGRCARIERLVNAVVDARENVTGERHWVRVSEPAQGRVHTERRLHQLMHDDRDYESGPAP 250
Query: 226 --VEKAVGRVEDKSSRPQVTVLNI---------EKDYTVITMRSKDRPKLLFDIVCTLTD 274
V++ + V +K++ + + E+ Y V+ M S+DRP+LLFD VC LTD
Sbjct: 251 TPVDEDLFSVGEKAATARTARRAVTRVSIDSWEERGYAVVKMTSRDRPRLLFDTVCALTD 310
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
MQYVVFH V + A QE+YIRH DG + + AER++V +CL AA+ERRA+
Sbjct: 311 MQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDNSAERQKVSRCLVAAVERRATH 364
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 63/169 (37%), Gaps = 22/169 (13%)
Query: 235 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV--------------- 278
D+ P V V N +D T++ + S +R +L ++V LTD+ V
Sbjct: 18 DRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSDGGWLMD 77
Query: 279 VFHGMVNTGRT---EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA---SEGLEL 332
VFH GR + EF R + R CL + S L
Sbjct: 78 VFHVTDQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCLGNVVGPGGPDVSGCAAL 137
Query: 333 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
E DR GLLS IT + +N + + T G+ YVTD G
Sbjct: 138 EFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYVTDTAGG 186
>gi|125590195|gb|EAZ30545.1| hypothetical protein OsJ_14593 [Oryza sativa Japonica Group]
Length = 397
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 188/326 (57%), Gaps = 28/326 (8%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+R MNPPRVV+DN C +ATVI+VDSV+ HG LL V+QV+ D+ LVI+KAY S
Sbjct: 15 DDEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFS 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFMDVFNV D DG K+ D + I YIQ LE D + P +R++VG++P EE+T IE
Sbjct: 75 SDGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIEL 134
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT-DHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA + C V +AE+WTHN R AAVVHVT D +G AI+D R++ I
Sbjct: 135 TGTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADI 194
Query: 181 KELLFNVLRGYDDF---------------RKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L N+LRG S P G +E + + D D R
Sbjct: 195 STRLGNLLRGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHV---DGDPVR 251
Query: 226 VEKAVGRVEDKSSRPQVTVLNIEK---DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 282
E RV Q IE+ D + +R+ DR LL D+ + +
Sbjct: 252 SEAERQRV------VQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRA 305
Query: 283 MVNTGRTEAYQEFYIRHVDGLPISSE 308
+++ R EA FY+ G P+ ++
Sbjct: 306 EISSERGEAVDTFYLSDPQGHPVEAK 331
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 132/195 (67%), Gaps = 12/195 (6%)
Query: 259 KDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
+ + LLFD VCT+TDM YV+ HG V++ R AYQE+YIRHVDG P+ SEAER+RV+QC
Sbjct: 203 RGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHVDGDPVRSEAERQRVVQC 262
Query: 318 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEAAIERR ++GL LE+ T DR GLLSD+TRIFREN L+I+RAEIS+ G+ DTFY++D
Sbjct: 263 LEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISSERGEAVDTFYLSD 322
Query: 378 VTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET----------TTGFFLGNFFK 427
G+PV+ K ID+IR QIG L+VK + +T F GN FK
Sbjct: 323 PQGHPVEAKTIDAIRAQIGEATLRVKHNPFADGDGAGGGGGGATDDVAGSTAFLFGNLFK 382
Query: 428 -ARTFQTFKLIRSYS 441
R FQ F LI+ YS
Sbjct: 383 FYRPFQNFSLIKLYS 397
>gi|343173133|gb|AEL99269.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 164/237 (69%), Gaps = 7/237 (2%)
Query: 210 ERRLHQIMFDDRDYERVEKAVGRVEDKSSR-PQVTVLNI-EKDYTVITMRSKDRPKLLFD 267
ERRLHQIM+ DRDY+ R P VTV N EK YT + +R DRPKLLFD
Sbjct: 3 ERRLHQIMYADRDYDVTNPNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLLFD 62
Query: 268 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VCTLTDMQYVV+H V EAYQE++IRH+DG PISSEAER+R+I CLEAAI+RR S
Sbjct: 63 AVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRRTS 122
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
EG+ LELC+EDR+GLLSD+TRIFREN LS+ RAE++T G + + FYV D +G PV +
Sbjct: 123 EGIRLELCSEDRIGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVKSET 182
Query: 388 IDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKART---FQTFKLIRSYS 441
I+++R +IG T L VK+ + PP+E + GF LG FK+R+ L++SYS
Sbjct: 183 IEAVRNEIGKTILHVKQDD-YSKSPPQE-SGGFSLGTLFKSRSEKFLYHLGLVKSYS 237
>gi|343173131|gb|AEL99268.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 164/237 (69%), Gaps = 7/237 (2%)
Query: 210 ERRLHQIMFDDRDYERVEKAVGRVEDKSSR-PQVTVLNI-EKDYTVITMRSKDRPKLLFD 267
ERRLHQ+M+ DRDY+ R P VTV N EK YT + +R DRPKLLFD
Sbjct: 3 ERRLHQMMYADRDYDVTNLNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLLFD 62
Query: 268 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
VCTLTDMQYVV+H V EAYQE++IRH+DG PISSEAER+R+I CLEAAI+RR S
Sbjct: 63 AVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRRTS 122
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
EG+ LELC+EDRVGLLSD+TRIFREN LS+ RAE++T G + + FYV D +G PV +
Sbjct: 123 EGIRLELCSEDRVGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVKSET 182
Query: 388 IDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKART---FQTFKLIRSYS 441
I+++R +IG T L VK+ + PP+E + GF LG FK+R+ L++SYS
Sbjct: 183 IEAVRNEIGKTILHVKQDD-YSKSPPQE-SGGFSLGTLFKSRSEKFLYHLGLVKSYS 237
>gi|357476531|ref|XP_003608551.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
gi|355509606|gb|AES90748.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
Length = 375
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 187/308 (60%), Gaps = 15/308 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L R++PPRV IDN++C + TV+K+D NKHGILL+++Q L D++L+I K+YI
Sbjct: 28 IDREIESLKERIHPPRVCIDNDSCRNCTVVKIDRANKHGILLEMVQALTDLDLIISKSYI 87
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM-----PTEE 115
SSDGGW MDVF+V D G K+ DK ++++I+Q L + + SS V P E
Sbjct: 88 SSDGGWLMDVFHVKDQIGNKLTDKSLVNHIEQILCECTAKSNGETSSETVQHCCKGPQEA 147
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+ +IE GTDRPGLFSE+ VL DL N+++A+ WTHND+ +++ D S I + +
Sbjct: 148 NVAIEVIGTDRPGLFSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPEDASRPGPINERE 207
Query: 176 RLSTIKELLFNVL-----RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
RL+ + + + NV+ +G D R S G + ERRLHQ+M+ DYE
Sbjct: 208 RLAQVVDQIRNVIEANEGKGDKDMRSVVLKSSTTGHSHTERRLHQMMYAASDYESCHACH 267
Query: 231 GRVEDKSSRP----QVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
G + + R V+V + +DY V+ +RS+DRPKLLFDIVC LTDMQY VFH V
Sbjct: 268 GDNDSEHKRQYDGTHVSVDRYQGRDYWVVNVRSRDRPKLLFDIVCMLTDMQYEVFHAAVT 327
Query: 286 TGRTEAYQ 293
+ A Q
Sbjct: 328 SNSPMAEQ 335
>gi|2827701|emb|CAA16674.1| predicted protein [Arabidopsis thaliana]
Length = 446
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 187/318 (58%), Gaps = 16/318 (5%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I DP
Sbjct: 100 EHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIIDP 159
Query: 175 KRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
R + +K+ L V+ + R + P G + ERRLH++M+ + DYE
Sbjct: 160 IRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYENC 219
Query: 227 -------EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+VV
Sbjct: 220 FDCDCFGDRCDALWRGRCERIHVTIEAC-NGYSMVNVKCRDRPKLLFDTVCALKELQFVV 278
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDR 339
FH + + A QE++IR +G + +E +RER+ CL AAI RRAS+GL+LE+ TE++
Sbjct: 279 FHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIRTENK 338
Query: 340 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTK 399
+GLLSD+TR+ REN LSI RAE+ T G +FYVTDV G P ++++ R++G
Sbjct: 339 MGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGGAV 398
Query: 400 LQVKRSTILAPKPPKETT 417
+ + + P+ T+
Sbjct: 399 VSAVKGVGMMPRRIGSTS 416
>gi|388519119|gb|AFK47621.1| unknown [Lotus japonicus]
Length = 262
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 157/232 (67%), Gaps = 10/232 (4%)
Query: 205 GIMNRERRLHQIMFDDRDYERVEKAVGRVE---DKSSRPQVTVLNI-EKDYTVITMRSKD 260
G + +RRLHQ++F DRDYER + S RP++ + EK Y+ ++++ KD
Sbjct: 28 GSTHMDRRLHQMLFADRDYERASVTTTTPDVDCPLSFRPKIEIERCGEKGYSAVSVKCKD 87
Query: 261 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320
R KL+FDIVCTLTDMQYVVFH +++ A QE++IRH+DG + +E E+ERV +C+EA
Sbjct: 88 RAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIRHMDGCTLDTEGEKERVTKCIEA 147
Query: 321 AIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
AI+RR SEG+ LELC +DRVGLLS++TRI RE+ L++ RA +ST+G K + FYV D G
Sbjct: 148 AIQRRVSEGVSLELCAKDRVGLLSEVTRILREHGLTVCRAGVSTVGEKGLNVFYVRDAYG 207
Query: 381 NPVDPKIIDSIRRQIGHTKL-QVKRSTILAPKPPKET----TTGFFLGNFFK 427
NPVD KII+++R++IG T + VKR A K P ET FF GN +
Sbjct: 208 NPVDMKIIEALRKEIGQTVMVNVKRVPTNA-KAPAETRGWAKISFFFGNLLE 258
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P++ I+ + + V ++ ++ ++ L D+ V+ A ISS+G + + +
Sbjct: 66 PKIEIERCGEKGYSAVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIR 125
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R + I+ QR R S GV S+E DR
Sbjct: 126 HMDGCTLDTEGEKERVTKCIEAAIQR-----------RVSEGV-------SLELCAKDRV 167
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
GL SEV +L + V A + T ++ V +V D A +P + I+ L
Sbjct: 168 GLLSEVTRILREHGLTVCRAGVSTVGEKGLNVFYVRD-----AYGNPVDMKIIEAL 218
>gi|384244797|gb|EIE18295.1| hypothetical protein COCSUDRAFT_10349, partial [Coccomyxa
subellipsoidea C-169]
Length = 385
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 216/387 (55%), Gaps = 21/387 (5%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
+Y L R+NP ++ IDN++ T I++DS N G L++V+Q + +NL I++A ISSD
Sbjct: 1 DYEALELRINPTQIEIDNDSDDLVTRIELDSANYPGTLVEVVQYMLGLNLQIRRARISSD 60
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------EHT 117
WF DVF V + +G+K+R+ +D++++ L + + S+ G M E E T
Sbjct: 61 RSWFHDVFEVTEVNGEKVRNTRKLDFLKRMLNIEEE---GIFSNAGAMGHEGASGPTEST 117
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+E G D+ G ++V +L + CNV +A +WT+ R A V+ V + G I D +L
Sbjct: 118 VVELAGPDKAGKLAQVTRLLTNNGCNVRSAAVWTYYGRVAFVLSVLE--KGKPIADQVKL 175
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF--DDRDYERVEKAVGRVED 235
+++++ +++ G + + + G+++ +R LHQ+M D R +++
Sbjct: 176 QGLRQIMLDIM-GPEGEGISGVHVQHSGVVHHDRTLHQMMLAEDSRAWDQSHS----THA 230
Query: 236 KSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG-RTEAYQ 293
+P ++++ Y +I++ KDR KLLFD VCTL DM+Y V+HG +N+ A Q
Sbjct: 231 ARLKPNISIVQCRHTGYWLISIACKDRNKLLFDTVCTLADMEYDVYHGTINSHPDGSATQ 290
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 353
E+Y + G P + A E++ LEA+I+RR +GL+L + + D G L+ +T + R+
Sbjct: 291 EYYAKPRWGRPWDARAA-EKLAAMLEASIQRRFPKGLKLHVHSVDSFGSLATLTGVLRDA 349
Query: 354 SLSIKRAEISTIGGKVKDTFYVTDVTG 380
L+I RA+ ++ TFYV D +G
Sbjct: 350 GLTINRAKTNSANNVCGHTFYVMDASG 376
>gi|159463310|ref|XP_001689885.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283873|gb|EDP09623.1| predicted protein [Chlamydomonas reinhardtii]
Length = 580
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 224/464 (48%), Gaps = 87/464 (18%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP VV+DN + +D T+I +DS N+ G L++V+Q+L ++ L + KA ISSD
Sbjct: 122 EYETLELRVHPPNVVVDNESYSDRTLITLDSANRPGTLVEVVQLLTELGLCVTKARISSD 181
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM--PTEEHTSIEF 121
GGWF+D F+V D GKK+ L D + VGV ++ T E
Sbjct: 182 GGWFVDEFHVTDA-GKKV------------LSVDTDPGSDAEADVGVFEEASQCSTVFEL 228
Query: 122 TGTDRPGLFSEVCAVLADLHC--------NVVNAEIWTHNDRAAAVVHVTD--------- 164
G DR GL +EV A+L + C V +A +WTHN R A V+ V +
Sbjct: 229 AGNDRIGLLAEVIALLKNNGCEVGPGAWGQVRSAAVWTHNHRVAFVISVLEASASATAGA 288
Query: 165 ----------HSTGYAIKDPKRLSTIKELLFNVL--RGYDDFRKAKTSLSPPGIMNRERR 212
IKD +L+ +++LL ++ G D T+ G+++ ERR
Sbjct: 289 VAAPAPGGGVGGGSCPIKDGIKLARLRQLLLGMMDPSGQDSVVNVATT---KGLIHYERR 345
Query: 213 LHQIMFDDRDYE-----RVEKAVGRVEDKSSRPQVTVLNIEK-DYTVITMRSKDRPKLLF 266
LHQ++ + + + + A + +P+V++ + ++ +Y +I++R +DR KLLF
Sbjct: 346 LHQLLLKEEEAQWRRAGELAAAYEAELAELQKPEVSIQHTKQHNYWMISIRCRDRQKLLF 405
Query: 267 DIVCTLTDMQYVVFHGMVNT--------GR--TEAYQEFYIRHVDGLPISSEAERERVIQ 316
D VCTL D+ Y V+HG V+ G+ + A Q FY+R G + ++
Sbjct: 406 DTVCTLADLNYDVYHGAVDCEVERERAHGQPLSIAVQTFYLRPRFGDCVWDAKRAAKLKY 465
Query: 317 CLEAAIERRASEGLELELC-------------------TEDRVGLLSDITRIFRENSLSI 357
LE AI+RR G ++ + T D L +T ++R+ L I
Sbjct: 466 MLEVAIQRRQPTGTKVHISGVPASAAAAASGAGGGGGATSD----LPALTAVWRDFGLCI 521
Query: 358 KRAEISTIGGKVKD-TFYVTDVTGNPVDPKIIDSIRRQIGHTKL 400
RA++ + G + TFY+ D G P ++ + +QIG +L
Sbjct: 522 SRAKVRALAGAAGEHTFYLVDRNGLPPADTVVQAACQQIGGVRL 565
>gi|148279892|gb|ABQ53997.1| unknown protein [Cicer arietinum]
Length = 106
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 93/106 (87%)
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 395
TEDRVGLLSDITRIFRENSL IKRAEIST GK KDTFYVTDVTG+PVDPKIIDSIRRQI
Sbjct: 1 TEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGSPVDPKIIDSIRRQI 60
Query: 396 GHTKLQVKRSTILAPKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 441
G T LQVK ++ L+PKPP+ T GF LG+FFKAR+FQ FKLIRSYS
Sbjct: 61 GDTVLQVKHNSSLSPKPPQGTKIGFLLGSFFKARSFQNFKLIRSYS 106
>gi|1532164|gb|AAB07874.1| similar to uridylyl transferase, Swiss-Prot Accession Number
P43919; localized according to blastn similarity to EST
sequences; therefore, the coding span corresponds only
to an area of similarity since the initation codon and
stop codon could not be precisely determined, partial
[Arabidopsis thaliana]
Length = 211
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 101/149 (67%), Gaps = 30/149 (20%)
Query: 70 VFNVIDCDGKKIRDKEVIDYIQ-----------------------------QRLETDAS- 99
VF VID DG KIRD +V+DYIQ QR+E++A
Sbjct: 1 VFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQRIESNAGW 60
Query: 100 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
F P LRSSVGVMPT+E+TSIE GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV
Sbjct: 61 FIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAV 120
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+HVTD+ST AI DP RLSTIKELL NVL
Sbjct: 121 IHVTDNSTHSAITDPIRLSTIKELLCNVL 149
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 86/145 (59%), Gaps = 9/145 (6%)
Query: 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEA 309
+YT I + DRP LL ++ LTD+ V + + T T A ++ ++
Sbjct: 76 EYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDP 135
Query: 310 ERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKV 369
R I+ L + LEL EDRVGLLSDITR FRENSL+I RAEIST GK
Sbjct: 136 IRLSTIKELLCNV---------LELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGKA 186
Query: 370 KDTFYVTDVTGNPVDPKIIDSIRRQ 394
KDTFYVTDVTGNPV+ KI++SIR+Q
Sbjct: 187 KDTFYVTDVTGNPVESKIVESIRQQ 211
>gi|302841007|ref|XP_002952049.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
gi|300262635|gb|EFJ46840.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
Length = 735
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 135/227 (59%), Gaps = 9/227 (3%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP V IDN T AD T+I +DS N+ G L++V+Q+L ++ L + KA ISSD
Sbjct: 45 EYETLELRVHPPNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARISSD 104
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS----- 118
GGWF+D F+V D GKK+ ++ + I++ L DA P + GV E S
Sbjct: 105 GGWFVDEFSVTDA-GKKVTNERKLRAIRKVLSVDAD--PGSDNESGVDSAFEEASQCSTL 161
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
E G DR GL ++V +L C V +A +WTHN R A V+ V D STG IKD +L+
Sbjct: 162 FELAGNDRIGLLADVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLA 221
Query: 179 TIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYE 224
+++LL N++ D ++ ++S G+++ ERRLHQ++ + + +
Sbjct: 222 RLRQLLLNMMHTPGDVAESVVNVSNTKGLIHYERRLHQLLLREEEAQ 268
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 239 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN---------TGR 288
+P+V V + ++DY ++ +R +DR KLLFD VCTL D+ Y V+HG V+
Sbjct: 504 KPEVFVQHSKQRDYWMVNIRCRDRQKLLFDTVCTLADLNYDVYHGAVDCELDRDKAGAKV 563
Query: 289 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGL------ 342
+ A Q FY+R G + ++ LE AI+RR +G ++ + G
Sbjct: 564 SIAVQTFYMRPRYGDAYWDPRKAAKLKYMLECAIQRRQPQGTKVHIQGAPSSGSGGSGGA 623
Query: 343 ----LSDITRIFRENSLSIKRAEISTIGGKVKD-TFYVTDVTGNPVDPKIIDSIRRQIGH 397
L +T ++R+ L I RA++ + G + TFY+ D G P ++ +QIG
Sbjct: 624 PAADLPALTAVWRKFGLCITRAKVRALAGSAGEHTFYLVDNFGRPPAEAVVQQACQQIGG 683
Query: 398 TKL 400
+L
Sbjct: 684 VRL 686
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 17/172 (9%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V + N D T+IT+ S +RP L ++V LT++ V +++ EF +
Sbjct: 56 PNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARISSDGGWFVDEFSVT 115
Query: 299 HVDGLPISSEAERERVIQCL--------------EAAIERRASEGLELELCTEDRVGLLS 344
G +++E + + + L ++A E + EL DR+GLL+
Sbjct: 116 DA-GKKVTNERKLRAIRKVLSVDADPGSDNESGVDSAFEEASQCSTLFELAGNDRIGLLA 174
Query: 345 DITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVDPKIIDSIRRQI 395
D+ + + N ++ A + T + V D TG P+ I + RQ+
Sbjct: 175 DVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLARLRQL 226
>gi|326507160|dbj|BAJ95657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 139/243 (57%), Gaps = 19/243 (7%)
Query: 70 VFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMP--TEEHTSIEFTGTD 125
VF+V D +G K+ K+ I+YI+Q + T S F + + + P +T IE G +
Sbjct: 18 VFHVRDQEGNKVYSKKAINYIEQAICTRDSGRFTVTRSNELASKPDVATHYTGIEMIGHN 77
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 185
RPG+FSE+ AVLA+ CNV+ A W+H D A V V+D ST I DP RL++I++ L
Sbjct: 78 RPGIFSEISAVLAEQGCNVMEAHAWSHKDSLACVAFVSDESTSTRINDPDRLASIQDHLC 137
Query: 186 NVLRGY----DDFRKAKTS-LSPPGIMNR-ERRLHQIMFDDRDYE----RVEKAVGRVE- 234
VL +D R+A+ L G+ + ERRLHQ+MF +D++ +V A +
Sbjct: 138 TVLGPGTSVDEDGRRARAHLLGVDGLTSHPERRLHQLMFASKDFDGQPGQVSAAFPMLSL 197
Query: 235 ---DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
K SR V+V EK Y+VI++ DRPKL+FD VCTLTDMQ+ VFH V++
Sbjct: 198 DGYKKGSRTVVSVDRCNEKGYSVISVECVDRPKLMFDTVCTLTDMQFDVFHASVSSCGPF 257
Query: 291 AYQ 293
A Q
Sbjct: 258 ACQ 260
>gi|12323212|gb|AAG51584.1|AC011665_5 unknown protein, 3' partial [Arabidopsis thaliana]
Length = 104
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 83/98 (84%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 7 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA 98
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA 104
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 396
G+L ++ +I + +L+I +A IS+ GG D F VTD GN V D ++D I++ +G
Sbjct: 45 GILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 101
>gi|343172210|gb|AEL98809.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 86/126 (68%), Gaps = 11/126 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ K + RMNPPRV +DNN+ + T+IKVDS NK G LL+V+QVLND+NL I++AYI
Sbjct: 10 VDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS-----SVGVMPTEE 115
SSDG WFMDVF+V D G K+ + +V + IQQ S P RS SVGV E
Sbjct: 70 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQ------SLGPRTRSFRSKRSVGVQSAVE 123
Query: 116 HTSIEF 121
HT+IE
Sbjct: 124 HTTIEL 129
>gi|241865260|gb|ACS68708.1| amino acid binding protein [Sonneratia alba]
gi|241865493|gb|ACS68779.1| amino acid binding protein [Sonneratia alba]
Length = 129
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 5/129 (3%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMD-VFNVID 75
V IDN +C D T+IKVDS+NK GILL+V+Q+L D++L+I KAY+SSDGGWFMD VF+ D
Sbjct: 1 VSIDNTSCTDCTLIKVDSMNKPGILLEVVQILADLDLIITKAYVSSDGGWFMDAVFHATD 60
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLR----SSVGVMPTEEHTSIEFTGTDRPGLFS 131
G KI D++ IDYI++ L + ++ VG+ ++T+IE TG DRPGL S
Sbjct: 61 QQGNKITDRKTIDYIEKVLGPNGHLTDRIKMWPGKRVGIHSIGDYTAIELTGKDRPGLLS 120
Query: 132 EVCAVLADL 140
E+ AVLA L
Sbjct: 121 EISAVLAGL 129
>gi|343172212|gb|AEL98810.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 87/123 (70%), Gaps = 5/123 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ K + RMNPPRV +DNN+ + T+IKVDS NK G LL+V+QVLND+NL +++AYI
Sbjct: 10 VDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS--SVGVMPTEEHTS 118
SSDG WFMDVF+V D +G K+ + +V + IQQ L S RS SVGV EHT+
Sbjct: 70 SSDGEWFMDVFHVTDQNGNKLSEDDVAERIQQSL---GPRTCSFRSKRSVGVQSAVEHTT 126
Query: 119 IEF 121
IE
Sbjct: 127 IEL 129
>gi|255646078|gb|ACU23526.1| unknown [Glycine max]
Length = 135
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 359
+DG + ++ E+ERVIQ +EAAI RR SEG+ LELC +DRVGLLS++TRI REN L++ R
Sbjct: 1 MDGCTLDTQGEKERVIQRIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCR 60
Query: 360 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL-QVKR--STILAPKPPKET 416
A +ST G + + FYV D +GNPVD K ++++R++IG T + VKR S AP+
Sbjct: 61 AGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVPSNAKAPETRGWA 120
Query: 417 TTGFFLGNFFK 427
T FF GN +
Sbjct: 121 KTSFFFGNLLE 131
>gi|222640928|gb|EEE69060.1| hypothetical protein OsJ_28067 [Oryza sativa Japonica Group]
Length = 314
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 86/127 (67%), Gaps = 10/127 (7%)
Query: 258 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
KDRP LL ++ LTD++ + + +E+YIRH+D P++S ER+R+ +C
Sbjct: 136 GKDRPGLLSEVFAVLTDLKCNIV----------SSEEYYIRHLDDSPVTSGDERDRLGRC 185
Query: 318 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEAAI+RR +EGL LEL EDRVGLLSD+TRIFRE+ LS+ AE++T G + + FYV
Sbjct: 186 LEAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVA 245
Query: 378 VTGNPVD 384
+G PV+
Sbjct: 246 ASGEPVE 252
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 98/157 (62%), Gaps = 18/157 (11%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIK--------VDSVNKHGILLQVIQVLNDVNLV 54
DE+ KL+ RMNPPRV +DN + AT++K VDS NK+G LL+V+QVL ++ L
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKLT 71
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRS-SVGVM 111
IK+AYISSDG WFMD +N K+ D VID I+ L + SF AP RS +
Sbjct: 72 IKRAYISSDGEWFMDGWN-------KLYDGLVIDRIELSLGAGSLSFRAPPERSVELEAE 124
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAE 148
T+IE G DRPGL SEV AVL DL CN+V++E
Sbjct: 125 AAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSE 161
>gi|159483207|ref|XP_001699652.1| hypothetical protein CHLREDRAFT_186726 [Chlamydomonas reinhardtii]
gi|158281594|gb|EDP07348.1| predicted protein [Chlamydomonas reinhardtii]
Length = 756
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 12/191 (6%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP VVIDN T D TVI +DS N+ G L++V+Q L ++ L I+ A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNETYEDVTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSSVGVMPTEEHTSIEF 121
GGWF+D F V + KI D+ I+ I++ L ETDA + E T E
Sbjct: 105 GGWFVDEFFVTETPKGKILDQRKINIIRKVLSIETDAERTARDK--------ELCTVFEL 156
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
G DR GL + V +L C V++A +WT +DR A V+ T+ G + DP +L ++
Sbjct: 157 AGRDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPPKLDRLE 214
Query: 182 ELLFNVLRGYD 192
++L+++L G D
Sbjct: 215 QILYDMLGGGD 225
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEA 309
+Y ++T+R +DR KL FD VCTL DM Y ++H +++ A Q FY+R G + E
Sbjct: 560 NYWLVTIRCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRPRYGECVWDER 619
Query: 310 ERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG-GK 368
++ LE+A++RR G ++ + + DR L++ + I RA++ G
Sbjct: 620 RAAKLRYMLESAVQRRFPRGTKVCVQSGDRSSLVA-LFSALSSGGFWITRADVRAHGHDN 678
Query: 369 VKDTFYVTDVTGN 381
F +TD G
Sbjct: 679 AVFEFTITDTRGQ 691
>gi|302850060|ref|XP_002956558.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
gi|300258085|gb|EFJ42325.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
Length = 763
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 8/189 (4%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP VVIDN+T D TVI +DS N+ G L++V+Q L ++ L I+ A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNDTYDDMTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
GGWF+D F V + K+ D I+ I++ L ++ + S + + T E G
Sbjct: 105 GGWFVDEFFVTETPKGKLLDPRKINIIRKVLSVESDSSASYKDK------DICTVFELAG 158
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DR GL + V +L C V++A +WT +DR A V+ T+ G + DP +L ++++
Sbjct: 159 RDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPVKLDRLEQI 216
Query: 184 LFNVLRGYD 192
L+++L D
Sbjct: 217 LYDMLGSGD 225
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%)
Query: 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEA 309
+Y ++T++ +DR KL FD VCTL DM Y ++H +++ A Q FY+R G I E
Sbjct: 619 NYWLVTIQCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRPRYGECIWDER 678
Query: 310 ERERVIQCLEAAIERRASEGLELELCTEDRVGLL 343
++ LE+A++RR G ++ + + DR L+
Sbjct: 679 RAAKLRYMLESAVQRRFPRGTKVCVQSSDRSALV 712
>gi|294460772|gb|ADE75960.1| unknown [Picea sitchensis]
Length = 178
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 13/177 (7%)
Query: 254 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERER 313
+ ++S ++ +L DIV L D ++ +++ F++ DG ++ E +
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 314 VIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTF 373
+ Q G LELC D++G LSD TRIFREN LS+ RA+I++ K D F
Sbjct: 61 IQQ------------GTRLELCRTDQIGPLSDATRIFRENGLSVTRADITSRDEKGVDVF 108
Query: 374 YVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKART 430
YVTDV GN VD K +++IR++IG LQVK S++ P+E ++ F G+ FK+++
Sbjct: 109 YVTDVAGNFVDSKTVEAIRQEIGKRALQVKESSMHVDSSPQE-SSAFSFGDLFKSQS 164
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 25/153 (16%)
Query: 30 IKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDY 89
+++ S NKHGILL ++QVL D +L+I KAYISSDG W MDVF+V D DG K+ D+ +ID+
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 90 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 149
IQQ T +E TD+ G S+ + + +V A+I
Sbjct: 61 IQQ-----------------------GTRLELCRTDQIGPLSDATRIFRENGLSVTRADI 97
Query: 150 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+ +++ V +VTD + + D K + I++
Sbjct: 98 TSRDEKGVDVFYVTDVAGNFV--DSKTVEAIRQ 128
>gi|307103237|gb|EFN51499.1| hypothetical protein CHLNCDRAFT_59210 [Chlorella variabilis]
Length = 997
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Query: 11 RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV 70
R++PP + IDN T + +DS N+ G L+ ++Q +++L I A ISSDGGWF+DV
Sbjct: 463 RVHPPTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWFVDV 522
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL---RSSVGVMPTEEHTSIEFTGTDRP 127
F++ + +G+K+R+ + + I+Q L L M E T E G DRP
Sbjct: 523 FHLSEPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGPDRP 582
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL +EV +L CNV +A +WT+ R A V+ +T+ G + D +L +++L+ +
Sbjct: 583 GLLAEVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITE--KGLPVVDGIKLQRLRQLVLGI 640
Query: 188 L 188
+
Sbjct: 641 M 641
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 318 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKD--TFYV 375
LE++I+RR +GL++ + + DR G L+ +TR+ + LS+ RA++ T TFYV
Sbjct: 828 LESSIQRRFPKGLKVHVHSLDRFGCLAALTRVLHQTGLSVTRAKVRTYATSKSSGHTFYV 887
Query: 376 TDVTGNPVDPKIIDSIRRQIG 396
D G P D +++ R+IG
Sbjct: 888 MDARGGPPDKARVEAACREIG 908
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 240 PQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P + + N D +T +T+ S +RP L IV T++ + +++ F++
Sbjct: 467 PTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWFVDVFHLS 526
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRAS--------------EGLELELCTEDRVGLLS 344
+G + + + + + Q L +++ E EL DR GLL+
Sbjct: 527 EPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGPDRPGLLA 586
Query: 345 DITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 394
++T + N +++ A + T G+V +T+ G PV +D I+ Q
Sbjct: 587 EVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITE-KGLPV----VDGIKLQ 631
>gi|302819653|ref|XP_002991496.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
gi|300140698|gb|EFJ07418.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
Length = 109
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
LELCT+DRVGLLSD+TRIFREN LS+ RA++ST G K + FYVTD +GNPVD +I+++
Sbjct: 2 LELCTKDRVGLLSDVTRIFRENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEAT 61
Query: 392 RRQIGHTKLQVKRSTILAPKPPKETTTG--FFLGNFF 426
R++IG + LQVK T +P E + F G F
Sbjct: 62 RKEIGQSILQVKDLTPSSPNSQHEVASKSRFSFGTFL 98
>gi|22795259|gb|AAN08231.1| unknown protein, 5'-partial [Oryza sativa Japonica Group]
Length = 108
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDS 390
+LELCT D+VGLLS++TRIFRENSL++ RAE+ST G +TFYV D TG VD K IDS
Sbjct: 1 KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDS 60
Query: 391 IRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKARTFQTFKLI 437
IR+ IG +QVK + KE+ T F N F+ R+ +F +
Sbjct: 61 IRQAIGQ-NIQVKGQPEPSEPQKKESPTWFLFANLFRPRSLYSFGMF 106
>gi|343173273|gb|AEL99339.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 97.8 bits (242), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SE+ AVLAD CNVV +E+WTHN R A+VV++TD +TG+ I DP RL+ I+
Sbjct: 1 GRDRPGLLSEIFAVLADHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 LLFNVLRGYDDFRKAKTSLS 202
LL +VL G D R A T++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|343173271|gb|AEL99338.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 95.9 bits (237), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 58/80 (72%)
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SE+ AVL D CNVV +E+WTHN R A+VV++TD +TG+ I DP RL+ I+
Sbjct: 1 GRDRPGLLSEIFAVLTDHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 LLFNVLRGYDDFRKAKTSLS 202
LL +VL G D R A T++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|12039282|gb|AAG46072.1|AC079830_12 hypothetical protein [Oryza sativa Japonica Group]
Length = 222
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 10/127 (7%)
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAV 230
D +R++ I+ L ++L G + P + + ERRLHQ+M DRD E E+A
Sbjct: 97 DTERMARIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQE--ERAT 154
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
S RP V+V + +E+ Y+V+T++ + RPKLL D+VCTLTDM YVVFH ++T
Sbjct: 155 -----TSPRPAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGD 209
Query: 290 EAYQEFY 296
+A+QE +
Sbjct: 210 QAHQESH 216
>gi|297846572|ref|XP_002891167.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
gi|297337009|gb|EFH67426.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
Length = 113
Score = 88.2 bits (217), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
AVL+DL+C+VV+A++WTHN R A V+++ D S+G I D +R+S I+ L NVL +D
Sbjct: 3 AVLSDLNCDVVDAKLWTHNGRVAYVIYLRDGSSGAPILDSQRISKIEGWLKNVLNVDNDV 62
Query: 195 RK-AKTSLSPPGIMNRERRLHQIMFDDRDYER 225
AKT +S +M+ E RLHQ+MF+ RDYER
Sbjct: 63 NSAAKTCVSMDSMMHIEHRLHQLMFEVRDYER 94
>gi|357437023|ref|XP_003588787.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
gi|355477835|gb|AES59038.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
Length = 168
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 83/131 (63%), Gaps = 8/131 (6%)
Query: 241 QVTVLNIEK-DYTVITMRSKDRPK-LLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
QV + N K D TV+ + S ++ +L D++ LTDM + + +++ E++IR
Sbjct: 29 QVCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISS------DEYFIR 82
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 358
H++G +++ +E+E++I+ +EAAIERR E ++LEL ++ VG LSDI+R+ RENSL I
Sbjct: 83 HINGYALNTTSEKEQLIKFIEAAIERRVCESVKLELSADNSVGFLSDISRVLRENSLVIV 142
Query: 359 RAEISTIGGKV 369
RA I+ V
Sbjct: 143 RAFINLFSSLV 153
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 16 RVVIDNNTCADATVIKVDSVNKH-GILLQVIQVLNDVNLVIKKAYISSD 63
+V IDN + D TV+KVDSVNKH G+LL ++ VL D+N I K+YISSD
Sbjct: 29 QVCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISSD 77
>gi|218193487|gb|EEC75914.1| hypothetical protein OsI_12989 [Oryza sativa Indica Group]
Length = 119
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 10/123 (8%)
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVE 234
++ I+ L ++LRG + P + + ERRLHQ+M DRD E E+A
Sbjct: 1 MARIEAHLGHLLRGDSSSVSGSAVATVPATSVAHAERRLHQLMSPDRDQE--ERAT---- 54
Query: 235 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
S RP V+V + +E+ Y+V+T++ + RPKLL D+VCTLTDM YVVFH ++T +A+Q
Sbjct: 55 -TSPRPAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAHQ 113
Query: 294 EFY 296
E +
Sbjct: 114 ESH 116
>gi|108710368|gb|ABF98163.1| ACT domain-containing protein, putative [Oryza sativa Japonica
Group]
Length = 122
Score = 84.0 bits (206), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 8/99 (8%)
Query: 197 AKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVIT 255
A ++ + + ERRLHQ+M DRD E E+A S RP V+V + +E+ Y+V+T
Sbjct: 23 AVATVPAASVAHAERRLHQLMSPDRDQE--ERAT-----TSPRPAVSVQSCVERGYSVVT 75
Query: 256 MRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
++ + RPKLL D+VCTLTDM YVVFH ++T +A+QE
Sbjct: 76 VQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAHQE 114
>gi|194695564|gb|ACF81866.1| unknown [Zea mays]
gi|413917413|gb|AFW57345.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917414|gb|AFW57346.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917415|gb|AFW57347.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 158
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 15/69 (21%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C A VI VL ++ L++ KAYIS
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAI---------------VIHVLTNLKLIVTKAYIS 68
Query: 62 SDGGWFMDV 70
SDGGWFMDV
Sbjct: 69 SDGGWFMDV 77
>gi|297600649|ref|NP_001049552.2| Os03g0247900 [Oryza sativa Japonica Group]
gi|255674366|dbj|BAF11466.2| Os03g0247900 [Oryza sativa Japonica Group]
Length = 177
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
+G+ LEL DR GLL+ +TR+FREN LS+ AEI+T + F+VTDV G P DPK
Sbjct: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
Query: 388 IDSIRRQIGHTKLQV 402
ID + ++IG L+V
Sbjct: 118 IDEVIQRIGTESLRV 132
>gi|83594868|ref|YP_428620.1| PII uridylyl-transferase [Rhodospirillum rubrum ATCC 11170]
gi|386351633|ref|YP_006049881.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
gi|91206753|sp|Q2RNG2.1|GLND_RHORT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|83577782|gb|ABC24333.1| GlnB (protein PII) uridylyltransferase, GlnD [Rhodospirillum rubrum
ATCC 11170]
gi|346720069|gb|AEO50084.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
Length = 936
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 103 SLRSSVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
L +V V+P E + + D PGLFS++ +A N+++A+I T +D A +
Sbjct: 711 GLTVAVEVLPDPERAVSEVLVATDDHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDI 770
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
G+AI+ +R++ + + + +VL G KA PP + R R L
Sbjct: 771 FTVQTLEGHAIEKEERIARLAKTVRDVLTGDLPLEKALRR-QPPRLPERTRHL------- 822
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
+ P+V V N K +TVI + +DRP L+ + LTD+ +
Sbjct: 823 ----------------TVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQI 866
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI----ERRASEGLE 331
V+T FY++ V G+ I A+ ++ + LEAAI R+ EG E
Sbjct: 867 SSARVSTYGERVVDSFYVKDVFGMKIVHRAKLAQIREALEAAITQTVPRKVEEGAE 922
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TVI+++ ++ G L V + L DV + I A +S+ G +D F V
Sbjct: 825 PPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G KI + + I++ LE
Sbjct: 885 KDVFGMKIVHRAKLAQIREALEA 907
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR G L +TR + ++ I A +ST G +V D+FYV DV G
Sbjct: 841 IEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVKDVFG 889
>gi|357030935|ref|ZP_09092879.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
gi|356415629|gb|EHH69272.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
Length = 945
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 24/213 (11%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDAEGCS 804
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P +L + L+ L G D R+ S G+ R R +H
Sbjct: 805 FEEPHQLGRLNHLVEQALSGRLDIRQGIAEASHHGLSRRMRAIH---------------- 848
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N D +TVI + +DRP LL D+ L+ + + T
Sbjct: 849 -------VPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGM 901
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
A FY+R + G+ I R+ + L A++
Sbjct: 902 RAVDVFYVRDLLGMKIVDPVRLNRIREALLASL 934
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ L RRM PPRVVIDN TVI+V+ ++ G+L V L+ +L I A+I
Sbjct: 837 HHGLSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHI 896
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102
++ G +DVF V D G KI D ++ I++ L AS P
Sbjct: 897 TTYGMRAVDVFYVRDLLGMKIVDPVRLNRIREALL--ASLTP 936
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DR GLL D+T SL I A I+T G + D FYV D+ G KI+D +
Sbjct: 866 IEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFYVRDLLGM----KIVDPV 921
Query: 392 RRQIGHTKLQVKRSTILAPKPPKETTT 418
R +++ + + + PP+ T
Sbjct: 922 RLN------RIREALLASLTPPQPATA 942
>gi|222625543|gb|EEE59675.1| hypothetical protein OsJ_12082 [Oryza sativa Japonica Group]
Length = 117
Score = 68.9 bits (167), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Query: 197 AKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVIT 255
A ++ + + ERRLHQ+M DRD E E+A S RP V+V + +E+ Y+V+T
Sbjct: 23 AVATVPAASVAHAERRLHQLMSPDRDQE--ERAT-----TSPRPAVSVQSCVERGYSVVT 75
Query: 256 MRSKDRPKLLFDIVCTLTDMQYV 278
++ + RPKLL D+VCTLTDM YV
Sbjct: 76 VQCRYRPKLLLDVVCTLTDMDYV 98
>gi|413941730|gb|AFW74379.1| hypothetical protein ZEAMMB73_033208, partial [Zea mays]
Length = 76
Score = 68.9 bits (167), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
MDVF+V D G+K+ D VI YIQQ L T A + P E T++E TG R
Sbjct: 1 MDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAA-------APPEGLTALELTGPGRA 53
Query: 128 GLFSEVCAVLADLHCNVVNAEIW 150
GL SEV AVLAD+ C V +A W
Sbjct: 54 GLLSEVFAVLADMQCGVADARAW 76
>gi|145355694|ref|XP_001422087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582327|gb|ABP00404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 29/182 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P V+IDN + A ATV++V N G LL + L ++ L I K + G F V
Sbjct: 12 PIVIIDNKSDAFATVVEVSFGNYLGELLDTVAALKNLGLDINKGDVQMSGDSTKTSKFYV 71
Query: 74 ID-CDGKKIRDKEVIDYIQQRLETD------------ASFAPSLRSSVGVM--------- 111
ID +G+K+ E ++ I+Q + T+ + AP+ GV+
Sbjct: 72 IDRENGEKVTKSERLEEIRQTILTNMMAFHPEAAEYIQAKAPTRAGGEGVLGKVKKKVQT 131
Query: 112 -----PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
P H+ +E TDRPGL +V L DL VV+AE+ T D+A+ +++VT H
Sbjct: 132 GIKCAPERYHSKLEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDKASDIIYVT-HK 190
Query: 167 TG 168
G
Sbjct: 191 GG 192
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 311 RERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVK 370
+++V ++ A ER S+ LE+ T DR GLL D+ R ++ SL + AE+ TIG K
Sbjct: 126 KKKVQTGIKCAPERYHSK---LEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDKAS 182
Query: 371 DTFYVTDVTGNPVDPKI 387
D YVT G P+ P +
Sbjct: 183 DIIYVTH-KGGPLSPPM 198
>gi|84515914|ref|ZP_01003275.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
gi|84510356|gb|EAQ06812.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
Length = 930
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PGLFS + LA + N+V+A +T D A V G ++ RL +
Sbjct: 745 FAMVDHPGLFSRMTGALALVGANIVDARTYTSKDGYATAVFWVQDGDGNPYEE-SRLQRL 803
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
++++ LRG R+A D+D + + RV+ K
Sbjct: 804 RQMIVRTLRGEVVAREA--------------------LKDKDKIKKRERAFRVDTK---- 839
Query: 241 QVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
+T N + YT+I + ++DRP LL+D+ TL + + ++ T + FY++
Sbjct: 840 -ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKD 898
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGL 330
+ GL SEA+R+ + + L AI + A +
Sbjct: 899 MVGLKYYSEAKRQSLERKLREAIAQGAQRAI 929
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR + I A I+T G +V DTFYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKDMVG 901
>gi|410943919|ref|ZP_11375660.1| PII uridylyl-transferase [Gluconobacter frateurii NBRC 101659]
Length = 948
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 80/200 (40%), Gaps = 24/200 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCS 804
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+DP +L + L+ L G D K G R R +H
Sbjct: 805 FEDPHQLGRLNHLVEQALSGRLDLEKGIAEARHRGASRRMRAIH---------------- 848
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N D +TVI + +DRP LL DI TL+ + + T
Sbjct: 849 -------VPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 290 EAYQEFYIRHVDGLPISSEA 309
A FY+R + G+ I+ A
Sbjct: 902 RAVDVFYVRDLLGMKITDPA 921
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVV+DN TVI+++ ++ G+L + + L+ +L I A+I++ G
Sbjct: 842 RRMRAIHVPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG 109
+DVF V D G KI D + +I+ L + + P +S+
Sbjct: 902 RAVDVFYVRDLLGMKITDPARLAHIRDSLLSSLTPLPVKKSAAA 945
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL DITR + SL I A I+T G + D FYV D+ G + DP +
Sbjct: 866 IEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVRDLLGMKITDPARLAH 925
Query: 391 IRRQI--GHTKLQVKRST 406
IR + T L VK+S
Sbjct: 926 IRDSLLSSLTPLPVKKSA 943
>gi|407799900|ref|ZP_11146768.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
gi|407057892|gb|EKE43860.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
Length = 930
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 33/215 (15%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I F +D PG+FS + LA + NVV+A +T D A V G+ DP +
Sbjct: 740 TRICFALSDHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQDGDGHPY-DPHK 798
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L ++ + +LRG ++ G+ R++ I +RD+ RV ++ +
Sbjct: 799 LPRLRGTIGKILRG--------EVIAREGLDTRDK----IKKRERDF-RVPTSIAFDNEG 845
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
S + YT++ + ++DRP LL+D+ TL + ++ T + FY
Sbjct: 846 S-----------EIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFY 894
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
++ + GL I S+A+ +AA+ER+ E ++
Sbjct: 895 VKDMFGLKIYSDAK--------QAALERKLREAID 921
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 327 SEGLEL----ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+EG E+ E+ T DR GLL D+TR +SI A I+T G +V DTFYV D+ G
Sbjct: 843 NEGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYVKDMFG 900
>gi|58040302|ref|YP_192266.1| PII uridylyl-transferase [Gluconobacter oxydans 621H]
gi|81170616|sp|Q5FPT6.1|GLND_GLUOX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|58002716|gb|AAW61610.1| [Protein-PII] uridylyltransferase [Gluconobacter oxydans 621H]
Length = 949
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 26/219 (11%)
Query: 107 SVGVMPTEEHTSIEFT--GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+V P E E T D PGLFS++ LA ++V+A I T +D A
Sbjct: 744 TVEAYPIPERGVTELTVLCADHPGLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQ 803
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
G + ++P +L + L+ L G D RK S R R +H
Sbjct: 804 DGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDASHHSTSRRMRAIH---------- 853
Query: 225 RVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
P+V + N D +TVI + +DRP LL D+ L+ +
Sbjct: 854 -------------VPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAH 900
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ T A FY+R + G+ I+ R+ + L A++
Sbjct: 901 ITTYGMRAVDVFYVRDLLGMKITDPVRLARLRETLLASL 939
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 2 DDEYAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKK 57
D + RRM PPRVVIDN TVI+V+ ++ G+L V L+ +L I
Sbjct: 839 DASHHSTSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISS 898
Query: 58 AYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102
A+I++ G +DVF V D G KI D + +++ L + AP
Sbjct: 899 AHITTYGMRAVDVFYVRDLLGMKITDPVRLARLRETLLASLTSAP 943
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DR GLL D+T SL I A I+T G + D FYV D+ G KI D +
Sbjct: 871 IEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVRDLLGM----KITDPV 926
Query: 392 RRQIGHTKLQVKRSTILAPKPPKETTT 418
R L R T+LA TT
Sbjct: 927 R-------LARLRETLLASLTSAPVTT 946
>gi|340778936|ref|ZP_08698879.1| PII uridylyl-transferase [Acetobacter aceti NBRC 14818]
Length = 988
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLF+++ +A ++V+A I T ++ A +TG A
Sbjct: 776 LPARGVTEVTIHTQDHPGLFAQIAGAMALAGASIVDARIHTLSNGMALDTLWIQDATGEA 835
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRK--AKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
+P RL+ + + L G D AKT+ S +++R R +H
Sbjct: 836 FDEPHRLTKLFSITERALSGRLDIATEIAKTNASGQ-LLSRTRAIH-------------- 880
Query: 229 AVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
P+V + N +TVI + +DRP LL D+ L +M+ ++ + T
Sbjct: 881 ---------VPPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTY 931
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
A FY++ + G+ ++ E +++ L A +++
Sbjct: 932 GVRAVDVFYVKDLSGMKVTDENRLKKIRDRLMAGLKK 968
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V LN++ L I A+I++ G +DVF V
Sbjct: 882 PPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYV 941
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ D+ + I+ RL
Sbjct: 942 KDLSGMKVTDENRLKKIRDRL 962
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 322 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ RAS +E+ DR GLL D+ E L I A I+T G + D FYV D++G
Sbjct: 887 IDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVKDLSG 946
Query: 381 NPV 383
V
Sbjct: 947 MKV 949
>gi|407768112|ref|ZP_11115491.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288825|gb|EKF14302.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 917
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I TD PGLFS++ +A NVV+A+I T D A + G A D +
Sbjct: 731 TEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADGMALDTFFIQDTNGEAFNDKSK 790
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L +++ L V+ G L P + R + + D++ AV +VE
Sbjct: 791 LDKLRKTLEQVISG---------RLRPSQEIERRQ-----IKDNKH----RTAVFKVE-- 830
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P V + N + +TVI + ++DR LL+D+ TL D+ + ++T A F
Sbjct: 831 ---PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVF 887
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIE 323
Y++ V GL I S + +V + L +E
Sbjct: 888 YVKDVFGLKIDSRTKFLQVKETLTQTLE 915
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
+E+ DR GLL D+TR R+ SL I A IST G + D FYV DV G +D +
Sbjct: 846 IEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKDVFGLKIDSR 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 80/191 (41%), Gaps = 27/191 (14%)
Query: 23 TCADATVIKVDSVNKHGILLQVI--QVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKK 80
T DAT I V + + G+ Q+ L N+V K +DG +D F + D +G+
Sbjct: 726 TDIDATEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADG-MALDTFFIQDTNGEA 784
Query: 81 IRDKEVIDYIQQRLET--DASFAPSL------------RSSV-GVMP--------TEEHT 117
DK +D +++ LE PS R++V V P + HT
Sbjct: 785 FNDKSKLDKLRKTLEQVISGRLRPSQEIERRQIKDNKHRTAVFKVEPNVIIDNKASRTHT 844
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE T DR GL +V L DL + +A I T +RA V +V D G I +
Sbjct: 845 VIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKD-VFGLKIDSRTKF 903
Query: 178 STIKELLFNVL 188
+KE L L
Sbjct: 904 LQVKETLTQTL 914
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI++ + ++ G+L V + L D++L I A IS+ G +DVF V
Sbjct: 831 PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVK 890
Query: 75 DCDGKKI 81
D G KI
Sbjct: 891 DVFGLKI 897
>gi|308813530|ref|XP_003084071.1| unnamed protein product [Ostreococcus tauri]
gi|116055954|emb|CAL58487.1| unnamed protein product [Ostreococcus tauri]
Length = 481
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+IDN + A ATV++V G L+ I L ++ L I + ++ G F V+
Sbjct: 275 PKVIIDNKSDAFATVLEVTFGTYLGELVDTIAALKNLGLDINRGEVTMGGDEKTSRFYVL 334
Query: 75 DCD-GKKIRDKEVIDYIQQRLETD--------ASF----APS-----------LRSSV-- 108
D D G+K+ E ++ I+Q + T+ A F AP+ +RS+V
Sbjct: 335 DRDTGEKVTKSERLEEIRQTVLTNMLAFHPESAEFIQAKAPTRAGANDSPLGKVRSTVET 394
Query: 109 GVMPTEE--HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
G+ T E HT ++ TDRPGL +V L DL VV+AE+ T ++A ++++T
Sbjct: 395 GIKCTAEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYIT 451
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
+L++ T DR GLL D+ R ++ SL + AE+ TIG K KD Y+T G P+ P +
Sbjct: 406 KLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYITH-RGGPLSPAM 461
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 21/185 (11%)
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE-LLFN 186
G + A L +L ++ E+ D + +V D TG + +RL I++ +L N
Sbjct: 299 GELVDTIAALKNLGLDINRGEVTMGGDEKTSRFYVLDRDTGEKVTKSERLEEIRQTVLTN 358
Query: 187 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 246
+L + + + + +P + L ++ VE +
Sbjct: 359 MLAFHPESAEFIQAKAPTRAGANDSPLGKVR------STVETGIK-------------CT 399
Query: 247 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 306
EK +T + + + DRP LL D+V TL D+ V V+T +A YI H G P+S
Sbjct: 400 AEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYITHRGG-PLS 458
Query: 307 SEAER 311
E+
Sbjct: 459 PAMEQ 463
>gi|46390848|dbj|BAD16352.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 224
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDR 126
FMDVF+V D G K+ + VI YI+Q L M E T++E TG R
Sbjct: 26 FMDVFHVTDRLGCKLTNDSVITYIEQSLGM-------WNGPTRPMALEGLTALELTGAGR 78
Query: 127 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
GL SEV AVLAD+ C VV W H ++ + + T D +R++ I+
Sbjct: 79 TGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNKET-----DTERMARIE 128
>gi|407772641|ref|ZP_11119943.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
gi|407284594|gb|EKF10110.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
Length = 913
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I TD PGLFS++ +A NVV+A+I T D A + G A D +
Sbjct: 727 TEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMALDTFFVQDTNGEAFNDSTK 786
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L +++ L V+ G + P + R + +D + AV +VE
Sbjct: 787 LDRLRDTLEKVISG---------QIRPSQEIERRQ--------TKD-NKHRTAVFKVE-- 826
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P V + N + +TVI + ++DR LL+DI L D+ + ++T A F
Sbjct: 827 ---PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVF 883
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAI 322
Y++ V GL I S + +V + L AI
Sbjct: 884 YVKDVFGLKIDSRTKFVQVKETLTQAI 910
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 38/189 (20%)
Query: 236 KSSRPQVTV---LNIEKDYTVITMRSKDRPKLLFDIVCTLTDM-QYVVFHGMVNTGRTEA 291
++S ++TV ++ E D T IT+ + D P L I + VV ++ A
Sbjct: 708 RNSGAEITVDVRIDTEIDATEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMA 767
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCLEAAI--ERRASEGLE------------------ 331
F+++ +G + + +R+ LE I + R S+ +E
Sbjct: 768 LDTFFVQDTNGEAFNDSTKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHRTAVFKVEP 827
Query: 332 --------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
+E+ DR+GLL DITR R+ S+ I A IST G + D FYV D
Sbjct: 828 NVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKD 887
Query: 378 VTGNPVDPK 386
V G +D +
Sbjct: 888 VFGLKIDSR 896
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 27/193 (13%)
Query: 22 NTCADATVIKVDSVNKHGILLQVI--QVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGK 79
+T DAT I V + + G+ Q+ L N+V K +DG +D F V D +G+
Sbjct: 721 DTEIDATEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADG-MALDTFFVQDTNGE 779
Query: 80 KIRDKEVIDYIQQRLET--DASFAPSL------------RSSV-GVMP--------TEEH 116
D +D ++ LE PS R++V V P + H
Sbjct: 780 AFNDSTKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHRTAVFKVEPNVIIDNKASRTH 839
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE T DR GL ++ L DL + +A I T +RA V +V D G I +
Sbjct: 840 TVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKD-VFGLKIDSRTK 898
Query: 177 LSTIKELLFNVLR 189
+KE L +R
Sbjct: 899 FVQVKETLTQAIR 911
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI++ + ++ G+L + + L D+++ I A IS+ G +DVF V
Sbjct: 827 PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVK 886
Query: 75 DCDGKKI 81
D G KI
Sbjct: 887 DVFGLKI 893
>gi|114770139|ref|ZP_01447677.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2255]
gi|114548976|gb|EAU51859.1| PII uridylyl-transferase [alpha proteobacterium HTCC2255]
Length = 931
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 47/248 (18%)
Query: 92 QRLETDASFA-PSLRSSVGVMPTEEH---------TSIEFTGTDRPGLFSEVCAVLADLH 141
Q L+T+ F +L ++G E H T +F D PG+FS + +A +
Sbjct: 707 QGLDTNTQFIFANLFKNLGSKKIESHFEVDQDRDATRAQFVMQDHPGIFSRLTGAIALAN 766
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG---YDDFRKAK 198
NV++A +T +D A V + G D +L +K+L+ L G D K +
Sbjct: 767 ANVIDARTYTTSDGYATPVFWIQDNDGKPF-DFSKLGKLKKLIDQTLAGDVIARDVLKVR 825
Query: 199 TSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVIT 255
P RER I FD++ + YT+I
Sbjct: 826 NKYKP-----RERNFKVPTDITFDNQGSD-------------------------IYTIIE 855
Query: 256 MRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVI 315
+ ++DR LLFD+ TL + + ++ T +A FY++ + GL I+SE +++ +
Sbjct: 856 VDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYVKDMIGLKITSENKQQIIK 915
Query: 316 QCLEAAIE 323
L+ AIE
Sbjct: 916 GKLQEAIE 923
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++H +L + + L + N+ I A I++ G +DVF V
Sbjct: 838 PTDITFDNQGSDIYTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYV 897
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
D G KI + I+ +L+
Sbjct: 898 KDMIGLKITSENKQQIIKGKLQ 919
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ T DR LL D+TR ++ I A I+T G + D FYV D+ G KI
Sbjct: 854 IEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYVKDMIG----LKITSEN 909
Query: 392 RRQIGHTKLQ 401
++QI KLQ
Sbjct: 910 KQQIIKGKLQ 919
>gi|414341139|ref|YP_006982660.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|411026474|gb|AFV99728.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|453330895|dbj|GAC87222.1| PII uridylyl-transferase [Gluconobacter thailandicus NBRC 3255]
Length = 948
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 24/200 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCS 804
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+DP +L + L+ L G D K + G R R +H
Sbjct: 805 FEDPHQLGRLNHLVEQALSGRLDLEKGISEARHRGASRRMRAIH---------------- 848
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N D +TVI + +DR LL DI TL+ + + T
Sbjct: 849 -------VPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 290 EAYQEFYIRHVDGLPISSEA 309
A FY+R + G+ I+ A
Sbjct: 902 RAVDVFYVRDLLGMKITDAA 921
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TVI+++ ++ G+L + + L+ +L I A+I++ G
Sbjct: 842 RRMRAIHVPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+DVF V D G KI D + +I+ L
Sbjct: 902 RAVDVFYVRDLLGMKITDAARLAHIRASL 930
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DR GLL DITR + SL I A I+T G + D FYV D+ G KI D+
Sbjct: 866 IEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVRDLLGM----KITDAA 921
Query: 392 RRQIGHTKLQVKRSTILAPKPPKETTT 418
R + H + + + L P P K+T T
Sbjct: 922 R--LAHIRASLLDT--LTPLPVKKTAT 944
>gi|28201273|dbj|BAC56782.1| unknown protein [Oryza sativa Japonica Group]
Length = 328
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 25/125 (20%)
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQ---------------RLETD--ASFAPSLRSSVG 109
FMDVF+V D G K+ + VI YI+Q R D ++ SL+S +G
Sbjct: 199 FMDVFHVTDRLGCKLTNDSVITYIEQVGGFSWWFLDSGTSVRRSWDFLMAYMASLQS-LG 257
Query: 110 V-------MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
+ M E T++E TG DR GL SEV VLAD+ C VV WTH ++ +
Sbjct: 258 MWNGPTRPMALEGLTALELTGADRTGLISEVFVVLADMDCGVVEGRTWTHRVHLGCLIFL 317
Query: 163 TDHST 167
D T
Sbjct: 318 RDEET 322
>gi|386287193|ref|ZP_10064368.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
gi|385279725|gb|EIF43662.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
Length = 889
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDGKKIRDK- 84
AT I V + K G+ + + L ++L I+ A I + G G+ +D F V+ DG+ I D
Sbjct: 699 ATQIFVHTKAKLGLFALLAEALEQLDLSIQDARIYNSGTGYTLDTFYVLGADGESIGDNP 758
Query: 85 ----EVIDYIQQRLETDASFAPSL---------------RSSVGVMPTEEHTSIEFTGTD 125
+I+++Q+ LE F ++ R+S+ + HT +E D
Sbjct: 759 SRIAHIIEFMQEHLEHPERFPATIERRTPRQMRLFSIPTRTSMATDLNKGHTVLEVITPD 818
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
RPGL + + + + NA+I T +R V +TD + I DPK I++
Sbjct: 819 RPGLLARLARIFNQYDIRLQNAKIATLGERVEDVFFITDENQ-RPIDDPKLCEEIQQ 874
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 32/145 (22%)
Query: 283 MVNTGRTEAYQEFYIRHVDGLPISSEAER-ERVIQCLE----------AAIERRASEGLE 331
+ N+G FY+ DG I R +I+ ++ A IERR +
Sbjct: 732 IYNSGTGYTLDTFYVLGADGESIGDNPSRIAHIIEFMQEHLEHPERFPATIERRTPRQMR 791
Query: 332 L--------------------ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKD 371
L E+ T DR GLL+ + RIF + + ++ A+I+T+G +V+D
Sbjct: 792 LFSIPTRTSMATDLNKGHTVLEVITPDRPGLLARLARIFNQYDIRLQNAKIATLGERVED 851
Query: 372 TFYVTDVTGNPV-DPKIIDSIRRQI 395
F++TD P+ DPK+ + I++ I
Sbjct: 852 VFFITDENQRPIDDPKLCEEIQQAI 876
>gi|329891103|ref|ZP_08269446.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
gi|328846404|gb|EGF95968.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
Length = 812
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P E + DRPGLF+++ A L+ +VV A + T +D A V G Y
Sbjct: 585 PLESTARVAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPY 644
Query: 170 AIKDPKRLST-IKELLFNVLRGYDDFRKAKTS-LSPPGIMNRERRLHQIMFDDRDYERVE 227
++P+RL+ +K + VL+G A+TS L PP + R + +FD R R++
Sbjct: 645 GGREPRRLAILVKAMERAVLKG------ARTSTLEPPRVSAR-----RAVFDVRPVVRID 693
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
G VI + DRP LL D+ T++ Y V +
Sbjct: 694 ADTG-----------------TSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASF 736
Query: 288 RTEAYQEFYIRHVDGLPISSEAERE 312
A FYI DG S+A E
Sbjct: 737 GERAVDGFYITDADGRKPKSKARLE 761
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID +T A VI+V ++ G+L + + ++ + A+++S G +D F +
Sbjct: 688 PVVRIDADTGTSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYIT 747
Query: 75 DCDGKKIRDKEVIDYIQ 91
D DG+K + K ++ ++
Sbjct: 748 DADGRKPKSKARLEALK 764
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 33/161 (20%)
Query: 254 ITMRSKDRPKLLFDIVCTLTDMQY-VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERE 312
+ + ++DRP L D+ TL+ VV + A F I+ G P R
Sbjct: 592 VAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGREPRR 651
Query: 313 RVI--QCLEAAI---------------ERRA---------------SEGLELELCTEDRV 340
I + +E A+ RRA + + +E+ DR
Sbjct: 652 LAILVKAMERAVLKGARTSTLEPPRVSARRAVFDVRPVVRIDADTGTSAVVIEVSGADRP 711
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
GLL+D+ R + S + A +++ G + D FY+TD G
Sbjct: 712 GLLADLARTISAHGYSTRSAHVASFGERAVDGFYITDADGR 752
>gi|449446279|ref|XP_004140899.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 287
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ ++AT+++V ++ G L+ ++ L D+ L + K +S++G F +
Sbjct: 81 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 140
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + ++S ++ + G+ P E+ H
Sbjct: 141 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 200
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL EV +LAD++ +V +AEI T A HV+ G
Sbjct: 201 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS--YGG 258
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ +++ N LR Y R+ +T +
Sbjct: 259 AALN-----SSLSQVVVNCLRYY--LRRPETDI 284
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E + DR G + L DL +V + T ++T +G ++DP
Sbjct: 94 TIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVEDPDL 153
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L +I+ + N L Y + ++ GI E++L D D V
Sbjct: 154 LESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKL------DVDIAT------HVHV 201
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
K+ P+ ++L +E + DRP LL +++ L D+ V ++T A +F
Sbjct: 202 KADGPKRSLLYLE---------TADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKF 252
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIER 324
++ + G ++S + V+ CL + R
Sbjct: 253 HVSY-GGAALNSSLS-QVVVNCLRYYLRR 279
>gi|449494163|ref|XP_004159466.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 283
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ ++AT+++V ++ G L+ ++ L D+ L + K +S++G F +
Sbjct: 77 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 136
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + ++S ++ + G+ P E+ H
Sbjct: 137 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 196
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL EV +LAD++ +V +AEI T A HV+ G
Sbjct: 197 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS--YGG 254
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ +++ N LR Y R+ +T +
Sbjct: 255 AALN-----SSLSQVVVNCLRYY--LRRPETDI 280
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E + DR G + L DL +V + T ++T +G ++DP
Sbjct: 90 TIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLTRLDSGRKVEDPDL 149
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L +I+ + N L Y + ++ GI E++L D D V
Sbjct: 150 LESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKL------DVDIAT------HVHV 197
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
K+ P+ ++L +E + DRP LL +++ L D+ V ++T A +F
Sbjct: 198 KADGPKRSLLYLE---------TADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKF 248
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIER 324
++ + G ++S + V+ CL + R
Sbjct: 249 HVSY-GGAALNSSLS-QVVVNCLRYYLRR 275
>gi|381167755|ref|ZP_09876961.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
gi|380683128|emb|CCG41773.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
Length = 924
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+TG D PGLFS++ +A N+V+A+I T + A S G P +L+ +
Sbjct: 733 YTG-DHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQDSEGAPFDSPAKLNRL 791
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
+ VL G R A+ S G N R H R V++K SR
Sbjct: 792 ANTIEQVLSGR--LRLAQELASRKG--NLPSRAHVFKVPPRVL---------VDNKPSR- 837
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
+TVI + +DRP LL+DI +T + + ++T FY++ V
Sbjct: 838 ---------SHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDV 888
Query: 301 DGLPISSEAERERVIQCLEAAIERRAS 327
G + E + ER+ L AA++ + S
Sbjct: 889 FGHKVEHERKLERIRVTLLAALKEQNS 915
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TVI+++ ++ G+L + + + L I A+IS+ G +DVF V
Sbjct: 826 PPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQ 91
D G K+ + ++ I+
Sbjct: 886 KDVFGHKVEHERKLERIR 903
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLRSSVG 109
++ I+ G +D F V D +G + + + I+Q L A L S G
Sbjct: 755 IVDAKIITLTNGMALDTFFVQDSEGAPFDSPAKLNRLANTIEQVLSGRLRLAQELASRKG 814
Query: 110 VMPTE------------------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+P+ HT IE G DRPGL ++ + + L + +A I T
Sbjct: 815 NLPSRAHVFKVPPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHIST 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ +R V +V D G+ ++ ++L I+ L L+
Sbjct: 875 YGERVVDVFYVKD-VFGHKVEHERKLERIRVTLLAALK 911
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 78/207 (37%), Gaps = 45/207 (21%)
Query: 245 LNIEKDYTVITMRSKDRPKLLFDIVCTLT-DMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
++ ++ T + + + D P L I + +V ++ A F+++ +G
Sbjct: 721 VDAQRAVTEMVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQDSEGA 780
Query: 304 PISSEAERERVIQCLEAAIERRASEGLEL------------------------------- 332
P S A+ R+ +E + R EL
Sbjct: 781 PFDSPAKLNRLANTIEQVLSGRLRLAQELASRKGNLPSRAHVFKVPPRVLVDNKPSRSHT 840
Query: 333 --ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDS 390
E+ DR GLL DIT + L I A IST G +V D FYV DV G+ V+ +
Sbjct: 841 VIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDVFGHKVEHE---- 896
Query: 391 IRRQIGHTKLQVKRSTILAPKPPKETT 417
KL+ R T+LA + +T
Sbjct: 897 -------RKLERIRVTLLAALKEQNST 916
>gi|340028705|ref|ZP_08664768.1| PII uridylyl-transferase [Paracoccus sp. TRP]
Length = 928
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T F D PG+FS + LA + N+V+A +T D A V + G+ R
Sbjct: 730 TRAAFVLADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYAS-DR 788
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L ++ ++ L+G I+ RE DRD + ++ R
Sbjct: 789 LPRLRAMIQRTLKGE--------------IVARE------ALADRDKPKKRESAFRFPT- 827
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+T N D YTVI + ++DRP LL+D+ TL D + ++ T + F
Sbjct: 828 ----HITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTF 883
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIE 323
Y++ + GL + + RE + + L AI+
Sbjct: 884 YVKDMFGLKLHQQNRREALEKKLRQAIK 911
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR +N + I A I+T G +V DTFYV D+ G
Sbjct: 842 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFG 890
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN TVI+VD+ ++ G+L + + L D ++ I A I++ G +D F V
Sbjct: 826 PTHITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + ++++L
Sbjct: 886 KDMFGLKLHQQNRREALEKKL 906
>gi|149200755|ref|ZP_01877730.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
gi|149145088|gb|EDM33114.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
Length = 921
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A V + G+ + RL +
Sbjct: 736 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDADGHPF-EADRLPRL 794
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+ ++ L+G R+A S + RER I FD+ E
Sbjct: 795 RNMIQKTLKGEVVPREAIKSRDK--LKKRERAFRVPTHITFDNDGSE------------- 839
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + ++ T + FY+
Sbjct: 840 ------------IYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
+ + GL S+++R + + L AAIE EG+E
Sbjct: 888 KDMFGLKFHSDSKRAALERKLRAAIE----EGVE 917
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFG 892
>gi|85704123|ref|ZP_01035226.1| PII uridylyl-transferase [Roseovarius sp. 217]
gi|85671443|gb|EAQ26301.1| PII uridylyl-transferase [Roseovarius sp. 217]
Length = 921
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A V + G+ + RL +
Sbjct: 736 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDADGHPF-ESDRLPRL 794
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+ ++ L+G R+A S + RER I FD+ E
Sbjct: 795 RNMIQKTLKGEVVPREAIKSRDK--LKKRERAFRVPTHITFDNDGSE------------- 839
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + ++ T + FY+
Sbjct: 840 ------------IYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
+ + GL SE++R + + L AAI +EG+E
Sbjct: 888 KDMFGLKFHSESKRAALERKLRAAI----AEGVE 917
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFG 892
>gi|254510379|ref|ZP_05122446.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
gi|221534090|gb|EEE37078.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
Length = 919
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 35/212 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
FT D PG+F+ + LA + NVV+A +T D + G+ + RL +
Sbjct: 734 FTMGDHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWVQDAEGHPF-EAARLPRL 792
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+++ L+G R+A S I RER + I FD+ E
Sbjct: 793 TQMIHKTLKGEVVAREALKSRDK--IKKRERAFNVPTHITFDNEGSE------------- 837
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL D + + ++ T + FY+
Sbjct: 838 ------------IYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQVVDTFYV 885
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEG 329
+ + GL SE++ ++ LEA + +EG
Sbjct: 886 KDMFGLKYHSESK----LRGLEAKLRTAITEG 913
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR + ++ I A I+T G +V DTFYV D+ G
Sbjct: 842 IEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQVVDTFYVKDMFG 890
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L D N+ I A I++ G +D F V
Sbjct: 826 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQVVDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G K + + ++ +L T
Sbjct: 886 KDMFGLKYHSESKLRGLEAKLRT 908
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 23/148 (15%)
Query: 39 GILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDG---KKIRDKEVIDYIQQR 93
GI ++ L V N+V ++Y + DG + D F V D +G + R + I +
Sbjct: 741 GIFARIAGALALVGANVVDARSYTTKDG-YVTDAFWVQDAEGHPFEAARLPRLTQMIHKT 799
Query: 94 LETDASFAPSLRSSVGV--------MPT---------EEHTSIEFTGTDRPGLFSEVCAV 136
L+ + +L+S + +PT E +T IE DRPGL ++
Sbjct: 800 LKGEVVAREALKSRDKIKKRERAFNVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRT 859
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTD 164
LAD + + NA I T+ ++ +V D
Sbjct: 860 LADANVYIANAVIATYGEQVVDTFYVKD 887
>gi|114707346|ref|ZP_01440243.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
gi|114537227|gb|EAU40354.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
Length = 964
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 59/100 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ +DN+ TVI+V+ +++ G+L + ++D++L I+ A+IS+ G +D F V
Sbjct: 857 PKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVT 916
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE 114
D G K+ + I I++RL++ A SSV MP++
Sbjct: 917 DLIGAKVTSEAKIARIERRLQSVLESAEGEVSSVNAMPSQ 956
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLL+DIT + SL I+ A IST G K+ D FYVTD+ G V
Sbjct: 878 DRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVTDLIGAKV 923
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I+ D P L S++ A N+ +++I+T D A V + + +R
Sbjct: 760 TRIKVLAPDHPRLVSQLAGACAGAKANIADSQIFTLTDGRALDVMTISRAFENEEDEMRR 819
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I E + +LRG IM+R ++ R R +
Sbjct: 820 ARRICENIEKLLRG-------------ETIMSR------LIGQSRGTRRADLF------- 853
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+P++TV N + TVI + DR LL DI ++D+ + ++T + F
Sbjct: 854 EVKPKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAF 913
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEG 329
Y+ + G ++SEA+ R+ + L++ +E ++EG
Sbjct: 914 YVTDLIGAKVTSEAKIARIERRLQSVLE--SAEG 945
>gi|365858204|ref|ZP_09398157.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
gi|363714593|gb|EHL98089.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
Length = 932
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-N 153
E +A+ AP L S V+ T + TD PGLFS + LA ++V+A I T N
Sbjct: 720 EAEATGAP-LTVSTRVLEARSVTEVTVYVTDHPGLFSRIAGALAVAGASIVDARIHTMTN 778
Query: 154 DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRL 213
RA V D + G A P +L+ + L+ L G +
Sbjct: 779 GRALDTFWVQD-AQGGAFDSPHKLARLSVLIEQALSGRLNL------------------- 818
Query: 214 HQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTL 272
D++ +V + R+ +V + N + +TVI + +DRP LL D+ +
Sbjct: 819 ------DQEIRKVRREPSRLRAVQVPGRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAI 872
Query: 273 TDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
++ + + T A FY++ V GL I +E + + + L AA+
Sbjct: 873 SEQGLQIASAHITTYGVRAVDVFYVKDVFGLKIENERKLASLREALLAAL 922
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVVIDN+ TVI+++ ++ G+L + +++ L I A+I++ G +DVF V
Sbjct: 838 PGRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYV 897
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPS 103
D G KI ++ + +++ L A+ P+
Sbjct: 898 KDVFGLKIENERKLASLREALL--AALGPA 925
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+EL DR GLL D+T E L I A I+T G + D FYV DV G
Sbjct: 854 IELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFG 902
>gi|339018851|ref|ZP_08644974.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
gi|338752065|dbj|GAA08278.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
Length = 983
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V +++ NL I A+I++ G +DVF V
Sbjct: 882 PPRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYV 941
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ +D I+ RL
Sbjct: 942 KDLFGLKITDKKRLDEIRDRL 962
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 29/229 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 762 EADAKDAP-LTVEVLPLPARGVTEVTVYTIDVPGLFSKIAGALALAGASIVDARIHTMMH 820
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + G A ++ RL+ + L+ L G D T ++ G + R+
Sbjct: 821 GMALDTFWIQDTAGSAYEETHRLARLSSLIEQALSGQLDI---GTEIARAGFGHMPLRMR 877
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLT 273
I P+V + N + YTVI + +DRP LL D+ ++
Sbjct: 878 AIHVP--------------------PRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMS 917
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCL 318
+ + + T A FY++ + GL I+ + R+R++ C+
Sbjct: 918 EENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLDEIRDRLLSCM 966
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL D+T E +L I A I+T G + D FYV D+ G + D K +D
Sbjct: 898 IEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLDE 957
Query: 391 IRRQI 395
IR ++
Sbjct: 958 IRDRL 962
>gi|51244781|ref|YP_064665.1| [protein-PII] uridylyltransferase [Desulfotalea psychrophila LSv54]
gi|50875818|emb|CAG35658.1| probable [Protein-PII] uridylyltransferase [Desulfotalea
psychrophila LSv54]
Length = 856
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+S V V E+ I DRPGL +++C VLA + V A+I+T D V
Sbjct: 656 KSLVKVFEGEDDWKILLMSHDRPGLLAKLCGVLALHNLAVAMAQIFTWEDGVIVDVVTVR 715
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
G D + +D FR A L+ ++ +L+Q Y
Sbjct: 716 PQDGAGFSD---------------KDWDSFR-ADIDLALSHRLDLGHKLYQKW--QTTYG 757
Query: 225 RVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
R + VG ++ P+V V N D Y+V+ + + DRP LL+ + TL D ++
Sbjct: 758 RKAELVGAID-----PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAY 812
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+ T + FY+ G + ++ RE ++Q L
Sbjct: 813 IATEVEQLIDVFYVLDSRGEKLLGDSLREDIVQAL 847
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRVV+DN + +V++V +V++ +L + Q L D + I KAYI+++ +DVF V+
Sbjct: 768 PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAYIATEVEQLIDVFYVL 827
Query: 75 DCDGKKI 81
D G+K+
Sbjct: 828 DSRGEKL 834
>gi|357160851|ref|XP_003578897.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 271
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 67 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 126
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P E+ H +
Sbjct: 127 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDVATHVIV 185
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL EV ++AD++ +V +AEI T A HV+
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDTEGLVAKDKFHVS------ 239
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ ++L N LR Y R+ +T
Sbjct: 240 -YRGAKLNSSLSQVLVNCLRYY--LRRPET 266
>gi|388515911|gb|AFK46017.1| unknown [Lotus japonicus]
Length = 290
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F +
Sbjct: 84 PVVIIDQDSDTDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ IQ E+ A A L ++ G++P +E H
Sbjct: 144 KADTGRKVDDSELLEAVRMTILNNMIQYHPESSAQLA--LGAAFGLVPPKEQVDVDIATH 201
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+I G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 202 LTISDDGPDRSLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKAKFHVS--Y 259
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++E+L N LR Y
Sbjct: 260 KGKAIIKP-----LQEVLANSLRYY 279
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + L +L NVV A ++ + +T TG + D
Sbjct: 95 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAITKADTGRKVDDS 154
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
+ L ++ + N + Y A+ +L G++ + ++
Sbjct: 155 ELLEAVRMTILNNMIQYHPESSAQLALGAAFGLVPPKEQV-------------------- 194
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D +T+ + D +++ + + DRP LL D+V +TD+ V G +T A
Sbjct: 195 -DVDIATHLTISDDGPDRSLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKA 253
Query: 294 EFYIRH 299
+F++ +
Sbjct: 254 KFHVSY 259
>gi|84499734|ref|ZP_00998022.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
gi|84392878|gb|EAQ05089.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
Length = 919
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A + G+ + R+ +
Sbjct: 734 FAMEDHPGIFSRLAGALALVGANVVDARTFTSKDGYATAAFWIQDADGHPY-ESARIPRL 792
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
++++ L+G R+A S I RER RV A+ + S
Sbjct: 793 RQMILKTLKGEVVPREAMKSRDK--IKKRERAF-----------RVSTAISFDNEGS--- 836
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
+ +T+I + ++DRP LLFD+ TL + ++ T + FY++ +
Sbjct: 837 --------EIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDM 888
Query: 301 DGLPISSEAERERVIQCLEAAIERRASEGLE 331
GL + SE ++ + LEA + SEG E
Sbjct: 889 FGLKLYSETKQ----KALEAKLREAISEGQE 915
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR LL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 842 IEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDMFG 890
>gi|89068998|ref|ZP_01156379.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
gi|89045367|gb|EAR51432.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
Length = 941
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 100 FAPSLRSSVG-------VMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150
FA LR +G + P E+ T + D PG+FS +C LA + N+ +A +
Sbjct: 726 FARLLRGGIGHDEVRFEITPDEDRDATRVCIVMEDHPGIFSRMCGALALVQANIKDARTF 785
Query: 151 THNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 210
T D A G+ + RL +++++ L+G ++A
Sbjct: 786 TSKDGYACAAFWVQDQDGHPY-ETDRLPRLRDMIGKTLKGEVVAKEA------------- 831
Query: 211 RRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD----YTVITMRSKDRPKLLF 266
F DRD + +A +V T + + D YT+I + ++DRP LL+
Sbjct: 832 -------FRDRDKLKKREAAFKVP--------TSITFDNDGSEIYTIIEVDTRDRPGLLY 876
Query: 267 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
D+ TL + ++ T + FY++ + GL SE+ R + L AI + A
Sbjct: 877 DLTRTLAAANVYIASAVIATYGEQVVDTFYVKDMFGLKFRSESRRRALEAKLRDAIRQGA 936
Query: 327 S 327
Sbjct: 937 Q 937
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG---------NP 382
+E+ T DR GLL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 864 IEVDTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQVVDTFYVKDMFGLKFRSESRRRA 923
Query: 383 VDPKIIDSIRR 393
++ K+ D+IR+
Sbjct: 924 LEAKLRDAIRQ 934
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 848 PTSITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQVVDTFYV 907
Query: 74 IDCDGKKIRDK 84
D G K R +
Sbjct: 908 KDMFGLKFRSE 918
>gi|119386663|ref|YP_917718.1| PII uridylyl-transferase [Paracoccus denitrificans PD1222]
gi|119377258|gb|ABL72022.1| metal dependent phosphohydrolase [Paracoccus denitrificans PD1222]
Length = 936
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T F D PG+FS + LA + N+V+A +T D A V + G+ R
Sbjct: 738 TRAAFVLADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYA-ADR 796
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L ++ ++ L+G I+ RE RD + +A R
Sbjct: 797 LPRLRTMIQRTLKGE--------------IVARE------ALAGRDKPKKREAAFRFPT- 835
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
VT N D YTVI + ++DRP LL+D+ TL D + ++ T + F
Sbjct: 836 ----HVTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTF 891
Query: 296 YIRHVDGL----PISSEAERERVIQCLEAAIER 324
Y++ + GL P EA +R+ Q ++ +ER
Sbjct: 892 YVKDMFGLKLHQPQRREALEKRLRQAIKEGVER 924
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR +N + I A I+T G +V DTFYV D+ G
Sbjct: 850 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFG 898
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V DN TVI+VD+ ++ G+L + + L D ++ I A I++ G +D F V
Sbjct: 834 PTHVTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYV 893
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + +++RL
Sbjct: 894 KDMFGLKLHQPQRREALEKRL 914
>gi|83952474|ref|ZP_00961205.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
gi|83836147|gb|EAP75445.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
Length = 923
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A + G+ + RL +
Sbjct: 738 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDADGHPF-EADRLPRL 796
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ LRG R+A S I RER I FD+ E
Sbjct: 797 RQMIDKTLRGEVIPREAIKSRDK--IKKRERAFRVPTHITFDNDGSE------------- 841
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 842 ------------IYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYV 889
Query: 298 RHVDGLPISSEAER----ERVIQCLEAAIERRAS 327
+ + GL SEA++ ++ + + A +ER S
Sbjct: 890 KDMFGLKFHSEAKQRSLDRKLREAISAGVERAES 923
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 846 IEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYVKDMFG 894
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L +N+ I A I++ G +D F V
Sbjct: 830 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYV 889
Query: 74 IDCDGKKI 81
D G K
Sbjct: 890 KDMFGLKF 897
>gi|149915372|ref|ZP_01903899.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
gi|149810661|gb|EDM70502.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
Length = 922
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 35/212 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + NVV+A +T D A + G + + +RL +
Sbjct: 737 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDAEG-SPYEAERLQRL 795
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L+G D + S + RER I FD+ E
Sbjct: 796 RDMIRKTLKG--DVVAGEAIRSRDKLKKRERAFKVPTHITFDNEGSE------------- 840
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 841 ------------IYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYV 888
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEG 329
+ + GL SEA+++ + + L AI SEG
Sbjct: 889 KDMFGLKFHSEAKQKALEKKLRTAI----SEG 916
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 845 IEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYVKDMFG 893
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V
Sbjct: 829 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYV 888
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDAS 99
D G K + ++++L T S
Sbjct: 889 KDMFGLKFHSEAKQKALEKKLRTAIS 914
>gi|114327079|ref|YP_744236.1| PII uridylyl-transferase [Granulibacter bethesdensis CGDNIH1]
gi|114315253|gb|ABI61313.1| [protein-PII] uridylyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 963
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGL ++ LA ++V+A I T + A ++G A
Sbjct: 749 LPARAVTEVTVYVADTPGLVGKIAGALAVAGASIVDARIHTMTNGMAMDTFWVQDTSGEA 808
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
P RL+ I L+ L G D + S P + R R +H
Sbjct: 809 FDQPNRLAKIAVLIEQALSGQLDIDEEIRKASNPLLGTRMRAIH---------------- 852
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V V N +TV+ + +DRP L+ DI + + + T
Sbjct: 853 -------VPPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGV 905
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
A FY++ V GL + +E + ++ Q L A+
Sbjct: 906 RAVDVFYVKDVFGLKVENERKLAKLRQALLGAL 938
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 27/215 (12%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATV--IKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+A++IR + +D V + V + G++ ++ L I A I +
Sbjct: 730 HARMIRAAGTQLLTVDTQPLPARAVTEVTVYVADTPGLVGKIAGALAVAGASIVDARIHT 789
Query: 63 -DGGWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLRSS---------- 107
G MD F V D G+ R ++ I+Q L +R +
Sbjct: 790 MTNGMAMDTFWVQDTSGEAFDQPNRLAKIAVLIEQALSGQLDIDEEIRKASNPLLGTRMR 849
Query: 108 -VGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+ V P + HT +E G DRPGL ++ A +A + +A I T+ RA
Sbjct: 850 AIHVPPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVD 909
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
V +V D G +++ ++L+ +++ L L DD
Sbjct: 910 VFYVKD-VFGLKVENERKLAKLRQALLGALTSPDD 943
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
LE+ DR GL+ DI + L I A I+T G + D FYV DV G V+
Sbjct: 870 LEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVKDVFGLKVE 922
>gi|384083336|ref|ZP_09994511.1| PII uridylyl-transferase [gamma proteobacterium HIMB30]
Length = 887
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 73/317 (23%)
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD----PKRLSTIKELLFNVL 188
+C +AD+ N E+WT + RA + + +T + + P R++ I+E
Sbjct: 578 LCLTVADI--TATNPELWT-SWRATLLRQLYHGTTDFLTRGLDSLPGRVAYIEET----- 629
Query: 189 RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIE 248
++ +L P I +R + E V D+ + T++++E
Sbjct: 630 ------KQDALTLVRPSIRSRADAFW-------NQWSQEYFVSHSSDELAWHLETLIDVE 676
Query: 249 KDYTVITMRSK----------------DRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
D TVI + + +R L D+ +D+ V ++T
Sbjct: 677 NDETVIALAANQTLTDIGSTQVLVSTPNRVHLFADLTACFSDLGLSVLDAKLHTSDAGRS 736
Query: 293 QEFYIRHVDGL--PISSEAERERVIQCLEAA-----IER-------RASEGLEL------ 332
+ +I D P+++ ++ER+++ LE A +E RA + L
Sbjct: 737 IDIFIIQHDATCQPVTASDDQERLLRGLEQAALGQYVENAGTRRTPRAHKYFNLPANVSI 796
Query: 333 -----------ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
EL DR GLL+ + R+F E L + A+I+T+G +V+D FYVTD GN
Sbjct: 797 RPDLEGKRTLIELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVTDSRGN 856
Query: 382 PV-DPKIIDSIRRQIGH 397
+ D I ++ ++ H
Sbjct: 857 NLYDDDFIHRLKERLEH 873
>gi|254465168|ref|ZP_05078579.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
gi|206686076|gb|EDZ46558.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
Length = 946
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D S G+ DP RL +
Sbjct: 761 FVMEDHPGIFARIVGALALVGANVVDARSYTTKDGYVTDAFWIQDSEGHPF-DPMRLHRL 819
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
K+++ L+G R A S I RER I FD+ E
Sbjct: 820 KQMIEKTLKGEVIARDALKSRDK--IKKRERAFKVPTHITFDNEGSE------------- 864
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 865 ------------IYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYV 912
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
+ + GL SE+++ + + L AI
Sbjct: 913 KDMFGLKYYSESKQRMLDRKLREAI 937
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V D FYV D+ G
Sbjct: 869 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYVKDMFG 917
>gi|84686319|ref|ZP_01014214.1| PII uridylyl-transferase [Maritimibacter alkaliphilus HTCC2654]
gi|84665846|gb|EAQ12321.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2654]
Length = 927
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 113 TEEH----TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHST 167
T++H T F D PG+FS + LA + NVV+A +T D A AV V DH
Sbjct: 730 TQDHDRDATRAAFVLADHPGIFSRLAGALALVGANVVDARTYTTKDGWATAVFWVQDHD- 788
Query: 168 GYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD-YERV 226
G+ +D K L +++++ L G R A S RD ++
Sbjct: 789 GHPFEDIK-LKRLEDMIHKTLSGKVIARDAMKS--------------------RDKMKKR 827
Query: 227 EKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
EKA + +T N D YT+I + ++DRP LL+D+ TL D + ++
Sbjct: 828 EKAF------TVPTNITFDNDGSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIA 881
Query: 286 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
T + FY++ + GL S+A+ + + + L AI + A
Sbjct: 882 TYGEQVVDTFYVKDMFGLKFFSDAKMKSLEKKLREAIVKGA 922
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR +N + I A I+T G +V DTFYV D+ G
Sbjct: 850 IEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDMFG 898
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 23/197 (11%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNV 73
R+ + + DAT + GI ++ L V N+V + Y + DG W VF V
Sbjct: 726 RIGLTQDHDRDATRAAFVLADHPGIFSRLAGALALVGANVVDARTYTTKDG-WATAVFWV 784
Query: 74 IDCDGKKIRD---KEVIDYIQQRLETDASFAPSLRSSVGVMPTEE--------------- 115
D DG D K + D I + L +++S + E+
Sbjct: 785 QDHDGHPFEDIKLKRLEDMIHKTLSGKVIARDAMKSRDKMKKREKAFTVPTNITFDNDGS 844
Query: 116 --HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+T IE DRPGL ++ LAD H + +A I T+ ++ +V D D
Sbjct: 845 DIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDMFGLKFFSD 904
Query: 174 PKRLSTIKELLFNVLRG 190
K S K+L +++G
Sbjct: 905 AKMKSLEKKLREAIVKG 921
>gi|399993822|ref|YP_006574062.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398658377|gb|AFO92343.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 933
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 35/212 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D S G+ + +RL +
Sbjct: 748 FCMADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDSEGHPY-EAERLPRL 806
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+E++ LRG + + S I RER + I FD+ E
Sbjct: 807 REMIHKTLRG--EVITGEALKSRDKIKKRERAFNVPTHITFDNDGSE------------- 851
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 852 ------------IYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 899
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEG 329
+ + GL SEA++ + LEA + +EG
Sbjct: 900 KDMFGLKYYSEAKQ----KSLEAKLRSAIAEG 927
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V D FYV D+ G
Sbjct: 856 IEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFG 904
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 840 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 899
Query: 74 IDCDGKK 80
D G K
Sbjct: 900 KDMFGLK 906
>gi|23015392|ref|ZP_00055169.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 924
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
I +TG D PGLFS++ +A N+V+A+I T + A S G A P +L+
Sbjct: 731 IVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDGGAFDSPAKLA 789
Query: 179 TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKS 237
+ + VL G +T L DR+ R K R
Sbjct: 790 KLSSCVEQVLSG-------RTRL------------------DRELAARKGKLPSRAHVFK 824
Query: 238 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
P+V V N+ + +TV+ + +DRP LL+DI +T++ + ++T FY
Sbjct: 825 VPPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFY 884
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIE 323
++ V G + + E++ L AA+E
Sbjct: 885 VKDVFGHKVEHGRKLEQIKAALLAALE 911
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L + + +V L I A+IS+ G +DVF V
Sbjct: 826 PPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ ++ I+ L
Sbjct: 886 KDVFGHKVEHGRKLEQIKAAL 906
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P+ HT +E G DRPGL ++ + + ++ + +A I T+ +R V +V D G+
Sbjct: 834 VPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKD-VFGHK 892
Query: 171 IKDPKRLSTIKELLFNVL 188
++ ++L IK L L
Sbjct: 893 VEHGRKLEQIKAALLAAL 910
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR GLL DIT L I A IST G +V D FYV DV G+ V+
Sbjct: 842 VEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKDVFGHKVE 894
>gi|126734870|ref|ZP_01750616.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
gi|126715425|gb|EBA12290.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
Length = 931
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 37/216 (17%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PGLFS + LA + NVV+A +T ND A V + G + RL +
Sbjct: 745 FAMVDHPGLFSRMTGALALVGANVVDARTYTSNDGYATAVFWVQDNDGNPY-EAARLPRL 803
Query: 181 KELLFNVLRG---YDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVE 234
++++ LRG D K K I RER I FD+ E
Sbjct: 804 RKMIERTLRGEVVAKDALKDKDK-----IKKRERAFKVPTNISFDNDGSE---------- 848
Query: 235 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
YT+I + ++DR LL+D+ TL + + ++ T +
Sbjct: 849 ---------------IYTIIEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDT 893
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGL 330
FY++ + GL SEA+R + + L AI + A +
Sbjct: 894 FYVKDIVGLKYHSEAKRAGLERKLREAIAQGAERAV 929
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N + I A I+T G +V DTFYV D+ G
Sbjct: 853 IEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDTFYVKDIVG 901
>gi|427431046|ref|ZP_18920742.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
gi|425878223|gb|EKV26942.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
Length = 926
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D PGLFS++ ++ +V+A+I T A V + G A+ D +
Sbjct: 727 TDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIMTLTTGMALDVFSVQDNDGTAVTDEDK 786
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L + ++ N L G K + + P G+ +R R V +V
Sbjct: 787 LDRLARIIENALSGKIWLEK-ELAAKPSGLPSRTR------------------VFKVP-- 825
Query: 237 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V V N K YTVI + +DRP L+D+ LT + V T F
Sbjct: 826 ---PRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVF 882
Query: 296 YIRHVDGLPISSEAERERVIQCL 318
Y++ V G+ I E + ++V + L
Sbjct: 883 YVKDVFGMKIEHEGKLKQVRETL 905
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 5 YAKLIRRMNPPRVVIDNNTCAD----ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+A+LIR ++ + C D T + + + + G+ ++ ++ + I A I
Sbjct: 700 HAELIRDAEAAGRLLTVDVCTDEIRGVTDVTIYTADHPGLFSKITGAMSLSGVTIVDAKI 759
Query: 61 SS-DGGWFMDVFNVIDCDGKKIRDKEVID--------------YIQQRLETDASFAPSLR 105
+ G +DVF+V D DG + D++ +D ++++ L S PS
Sbjct: 760 MTLTTGMALDVFSVQDNDGTAVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPSRT 819
Query: 106 SSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
V P ++ +T IE G DRPG +V A L + +A++ T +R
Sbjct: 820 RVFKVPPRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVV 879
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
V +V D G I+ +L ++E L + L G
Sbjct: 880 DVFYVKD-VFGMKIEHEGKLKQVRETLMDTLNG 911
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR G L D+T L I A+++T G +V D FYV DV G ++
Sbjct: 841 IEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYVKDVFGMKIE 893
>gi|385235075|ref|YP_005796417.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
gi|343463986|gb|AEM42421.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
Length = 915
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P + T F +D PGLFS + LA + NVV+A +T D A + G
Sbjct: 721 PDRDATRASFAMSDHPGLFSRMTGALALVGANVVDARTYTTKDGYATATFWVQDADGRPF 780
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+ RL +++++ + G ++ RE +RD +
Sbjct: 781 -EAARLPRLRQMIDRTMNGE--------------VVPRE------AMKERD------KIK 813
Query: 232 RVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
+ E + P + + E YT+I + ++DRP LL D+V TL + ++ T
Sbjct: 814 KRERAFTVPTLITFDNEGSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGE 873
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+A FY++ + GL +E R+++ L AI++ A
Sbjct: 874 QAVDTFYVKDMFGLKFHAEGRRQQLEAKLREAIKQGA 910
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R + +I A I+T G + DTFYV D+ G
Sbjct: 838 IEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYVKDMFG 886
>gi|356523245|ref|XP_003530251.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 291
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 85 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 144
Query: 75 DCD-GKKIRDKEVI---------DYIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ + E++ + IQ E+ + A L ++ G++P +E H
Sbjct: 145 KADTGRKVEEPELLEAIRLTIINNLIQYHPESSSQLA--LGAAFGLLPPKEQVDVDIATH 202
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+I G DRPGL ++ ++ D++ V + E T A A HV+ +
Sbjct: 203 INISDDGPDRSMLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVSYN- 261
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 262 -GKAISKP-----LQQVLANSLRYF 280
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + L +L NVV A ++ + +T TG +++P
Sbjct: 96 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEP 155
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
+ L I+ + N L Y ++ +L G++ + ++
Sbjct: 156 ELLEAIRLTIINNLIQYHPESSSQLALGAAFGLLPPKEQV-------------------- 195
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
D + + + D +++ + + DRP LL D+V +TD+ V G +T A
Sbjct: 196 -DVDIATHINISDDGPDRSMLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKA 254
Query: 294 EFYIRH 299
+F++ +
Sbjct: 255 KFHVSY 260
>gi|359409332|ref|ZP_09201800.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676085|gb|EHI48438.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 963
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+E T + D PGLFS + +A C+++NA I T +D + D + I+D
Sbjct: 764 KESTILVVMAADHPGLFSRIVGAVAVAGCSIMNARINTRHDGT-----ILDQ---FRIQD 815
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAK-TSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 232
R + I + N R AK S G ++ RRL ER + R
Sbjct: 816 KDRQAVIDPQIQN--------RIAKIIEQSLAGDISLFRRLQ---------ERSAQITKR 858
Query: 233 VEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
+ S P+V V N + +TVI + DRP LL+ I L + + V+T +
Sbjct: 859 QKAMSVPPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKV 918
Query: 292 YQEFYIRHVDGLPISSEAERERVIQCL 318
FY++ V GL I EA ++++ Q L
Sbjct: 919 VDVFYVKDVYGLKIEREASQKKIEQTL 945
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++ NN TVI+V+ ++ G+L Q+ L + L I A +S+ G +DVF V
Sbjct: 865 PPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYV 924
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI + I+Q L
Sbjct: 925 KDVYGLKIEREASQKKIEQTL 945
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 5 YAKLIRRMNP--PRVVIDNNTCAD--ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+A+L + N +++ID D +T++ V + + G+ +++ + I A I
Sbjct: 740 HARLAEQFNAGEKKLLIDFKIDDDKESTILVVMAADHPGLFSRIVGAVAVAGCSIMNARI 799
Query: 61 SS-DGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRS--------- 106
++ G +D F + D D + + D ++ + I+Q L D S L+
Sbjct: 800 NTRHDGTILDQFRIQDKDRQAVIDPQIQNRIAKIIEQSLAGDISLFRRLQERSAQITKRQ 859
Query: 107 -SVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
++ V P + HT IE G DRPGL ++ L L + +A + T+ ++
Sbjct: 860 KAMSVPPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVV 919
Query: 158 AVVHVTD 164
V +V D
Sbjct: 920 DVFYVKD 926
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR GLL IT + L I A +ST G KV D FYV DV G
Sbjct: 881 IEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVKDVYG 929
>gi|356557247|ref|XP_003546929.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 289
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 83 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 142
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E+++ IQ E+ A A L ++ G++P +E +E
Sbjct: 143 KADSGRKVEDPELLEAIRLTILNNMIQYHPESSAQLA--LGAAFGLVPPKEQVDVEIATQ 200
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ + D++ V + E T A A HV
Sbjct: 201 ITISDDGPKRSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEGLLAKAKFHVN--- 257
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
KD + ++ +L N LR +
Sbjct: 258 ----YKDKALIKPLQLVLVNSLRYF 278
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 22/188 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + L +L NVV A ++ + +T +G ++DP
Sbjct: 94 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDP 153
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
+ L I+ + N + Y A+ +L G++ + ++ VE A
Sbjct: 154 ELLEAIRLTILNNMIQYHPESSAQLALGAAFGLVPPKEQVD-----------VEIAT--- 199
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
Q+T+ + +++ + + DRP LL D+V T+TD+ V G +T A
Sbjct: 200 -------QITISDDGPKRSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEGLLAKA 252
Query: 294 EFYIRHVD 301
+F++ + D
Sbjct: 253 KFHVNYKD 260
>gi|395785698|ref|ZP_10465426.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|423717410|ref|ZP_17691600.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
gi|395424156|gb|EJF90343.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|395427625|gb|EJF93716.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
Length = 927
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 30/229 (13%)
Query: 105 RSSVGVMPT----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
++S+ +M T E+ T I D P L S + A N+V+A+I+T +D A +
Sbjct: 719 KTSLSIMMTPRASEDVTEITLLAPDHPRLLSIITGACAAAGANIVDAQIFTTSDGRALDI 778
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
+ + + + KR +KE++ L+G +PP R R++ +
Sbjct: 779 ILIKRAFDFDEDETKRARRVKEIIEQALKGTIRLPDEIARHAPP---KRTRKIFDVT--- 832
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
P V + N + + ++VI ++S DRP LL D+ TL+D+ +
Sbjct: 833 -------------------PTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDI 873
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
+ T +A FY+R + G +++ + R+ L + ++ + ++
Sbjct: 874 ASAHITTFGEKAIDSFYVRDLIGHKLTNPQRQTRICHKLLSIVQTQTAD 922
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ + DR GLLSD+T+ + SL I A I+T G K D+FYV D+ G+ +
Sbjct: 848 IEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYVRDLIGHKL 899
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N+ +VI+V S+++ G+L + + L+D++L I A+I++ G +D F V
Sbjct: 833 PTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYVR 892
Query: 75 DCDGKKIRDKE 85
D G K+ + +
Sbjct: 893 DLIGHKLTNPQ 903
>gi|110636357|ref|YP_676565.1| PII uridylyl-transferase [Chelativorans sp. BNC1]
gi|110287341|gb|ABG65400.1| UTP-GlnB uridylyltransferase, GlnD [Chelativorans sp. BNC1]
Length = 912
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLLS++T + + SL I A I+T G KV DTFYVTD+TG+ VD P ++
Sbjct: 826 IEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTDLTGSKVDNPDRLEV 885
Query: 391 IRRQI 395
IRR++
Sbjct: 886 IRREL 890
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE DRPGL SEV +VL+DL ++ +A I T ++ +VTD TG + +P RL
Sbjct: 826 IEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGSKVDNPDRLE 884
Query: 179 TIKELLFNVL 188
I+ L +
Sbjct: 885 VIRRELIETI 894
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR + N +VI+++ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 811 PRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVT 870
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS 107
D G K+ + + ++ I++ L P R++
Sbjct: 871 DLTGSKVDNPDRLEVIRRELIETIENGPPRRNN 903
>gi|90022247|ref|YP_528074.1| PII uridylyl-transferase [Saccharophagus degradans 2-40]
gi|89951847|gb|ABD81862.1| protein-P-II uridylyltransferase [Saccharophagus degradans 2-40]
Length = 900
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ + DR GLL+ I R+F + + ++ A+IST+G +V+D F+++D+ GNP+ DP +
Sbjct: 822 LEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISDIEGNPLSDPNLCAE 881
Query: 391 IRRQI 395
++++I
Sbjct: 882 LQKEI 886
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 35/201 (17%)
Query: 115 EHTSIEFTGT--------DRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDH 165
E TS EF G D P +F+ V LA + N+ +A +++ N A +V D
Sbjct: 700 ETTSHEFEGATQIFVRVKDAPHVFTAVANALAQQNLNIQDARVYSAANGYTADTFYVLDD 759
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
+ DP R I+E + LR +R + +P R+L Q R Y
Sbjct: 760 NFQPIGDDPARSEKIRESVLEELRLVSGYRDVVSRRTP-------RQLKQFAVPTRTYIS 812
Query: 226 VEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
+ G +TV+ + S DRP LL I DM + + ++
Sbjct: 813 NDIVSG-------------------HTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKIS 853
Query: 286 TGRTEAYQEFYIRHVDGLPIS 306
T F+I ++G P+S
Sbjct: 854 TLGERVEDIFFISDIEGNPLS 874
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P R I N+ + TV++V S ++ G+L + +V D+++ ++ A IS+ G D+F +
Sbjct: 806 PTRTYISNDIVSGHTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFI 865
Query: 74 IDCDGKKIRD--------KEVIDYIQQRLETDAS 99
D +G + D KE+ + R+E D +
Sbjct: 866 SDIEGNPLSDPNLCAELQKEICKQLDLRVEKDLA 899
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 22/177 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRD-- 83
AT I V + + V L NL I+ A + S+ G+ D F V+D + + I D
Sbjct: 709 ATQIFVRVKDAPHVFTAVANALAQQNLNIQDARVYSAANGYTADTFYVLDDNFQPIGDDP 768
Query: 84 ------KEVI-----------DYIQQRLETD-ASFAPSLRSSVGVMPTEEHTSIEFTGTD 125
+E + D + +R FA R+ + HT +E D
Sbjct: 769 ARSEKIRESVLEELRLVSGYRDVVSRRTPRQLKQFAVPTRTYISNDIVSGHTVLEVISPD 828
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
RPGL + + V D+ + NA+I T +R + ++D G + DP + +++
Sbjct: 829 RPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISD-IEGNPLSDPNLCAELQK 884
>gi|330993434|ref|ZP_08317369.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759464|gb|EGG75973.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 911
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 31/226 (13%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 703 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 762
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P++L + L+ L G+ D + ++ G RR+ I
Sbjct: 763 FEEPQQLGRLSLLIEQALTGHIDINR---EIAQCGRRLSGRRMRAIHVP----------- 808
Query: 231 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N + TV+ + +DRP LL DI L++ + + + T
Sbjct: 809 ---------PRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGV 859
Query: 290 EAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASE 328
A FY++ + GL I+ +R+ +Q EAA +RR+SE
Sbjct: 860 RAVDVFYVKDLFGLKITDRERLDRIRTTLLAGLQEAEAAAQRRSSE 905
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L + L++ L I A+I++ G
Sbjct: 800 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGV 859
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLET---DASFAPSLRSS 107
+DVF V D G KI D+E +D I+ L +A A RSS
Sbjct: 860 RAVDVFYVKDLFGLKITDRERLDRIRTTLLAGLQEAEAAAQRRSS 904
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 322 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ RAS + E+ DR GLL DIT E L I A I+T G + D FYV D+ G
Sbjct: 813 IDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 872
Query: 381 NPV-DPKIIDSIR 392
+ D + +D IR
Sbjct: 873 LKITDRERLDRIR 885
>gi|326403121|ref|YP_004283202.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
gi|325049982|dbj|BAJ80320.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
Length = 938
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 34/224 (15%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D GLFS + LA +V+A I T D A + G +
Sbjct: 738 LPARSVTEVVVYTADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGS 797
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++ P RL+ I ++ VL G RL R +EKA
Sbjct: 798 LEAPHRLAKISAVIEQVLSG---------------------RL-------RLATEIEKAA 829
Query: 231 -----GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
GR+ P+V V N + +TVI + +DRP LL D+ +T + +
Sbjct: 830 NSVVGGRMRAIHVPPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHI 889
Query: 285 NTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
T A FY++ V GL + +E + ++ L A+ R E
Sbjct: 890 TTYGVRAVDVFYVKDVFGLKVQNERKLAQLRSALIEALAGRPHE 933
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVV+DN+ TVI+V+ ++ G+L V + L I A+I++ G +DVF V
Sbjct: 843 PPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV 902
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K++++ + ++ L
Sbjct: 903 KDVFGLKVQNERKLAQLRSAL 923
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR GLL D+T L I A I+T G + D FYV DV G
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
>gi|400755337|ref|YP_006563705.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
gi|398654490|gb|AFO88460.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
Length = 933
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 35/212 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D S G+ + +RL +
Sbjct: 748 FCMADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDSEGHPY-EAERLPRL 806
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+E++ L+G + + S I RER + I FD+ E
Sbjct: 807 REMIHKTLKG--EVITGEALKSRDKIKKRERAFNVPTHITFDNDGSE------------- 851
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 852 ------------IYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 899
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEG 329
+ + GL SEA++ + LEA + +EG
Sbjct: 900 KDMFGLKYYSEAKQ----KSLEAKLRSAIAEG 927
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V D FYV D+ G
Sbjct: 856 IEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFG 904
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 840 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 899
Query: 74 IDCDGKK 80
D G K
Sbjct: 900 KDMFGLK 906
>gi|388516485|gb|AFK46304.1| unknown [Medicago truncatula]
Length = 293
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + DATV+++ ++ G LL ++ L D+ L + KA + D + F++
Sbjct: 87 PIVIIDQDLDPDATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSIT 146
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ IQ E+ + A + ++ G++P +E H
Sbjct: 147 KADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLA--MGAAFGLLPPKEQVDVDIATH 204
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+I G DRPGL ++ + D+ V + E T A A HV+
Sbjct: 205 INISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS--Y 262
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 263 KGKAISKP-----LQQVLANSLRYF 282
>gi|357467939|ref|XP_003604254.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
gi|355505309|gb|AES86451.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
Length = 293
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + DATV+++ ++ G LL ++ L D+ L + KA + D + F++
Sbjct: 87 PIVIIDQDLDPDATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSIT 146
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ IQ E+ + A + ++ G++P +E H
Sbjct: 147 KADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLA--MGAAFGLLPPKEQVDVDIATH 204
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+I G DRPGL ++ + D+ V + E T A A HV+
Sbjct: 205 INISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS--Y 262
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 263 KGKAISKP-----LQQVLANSLRYF 282
>gi|148259925|ref|YP_001234052.1| PII uridylyl-transferase [Acidiphilium cryptum JF-5]
gi|338981069|ref|ZP_08632305.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
gi|146401606|gb|ABQ30133.1| metal dependent phosphohydrolase [Acidiphilium cryptum JF-5]
gi|338208035|gb|EGO95934.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
Length = 938
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 34/224 (15%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D GLFS + LA +V+A I T D A + G +
Sbjct: 738 LPARSVTEVVVYTADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGS 797
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++ P RL+ I ++ VL G RL R +EKA
Sbjct: 798 LEAPHRLAKISAVIEQVLSG---------------------RL-------RLATEIEKAA 829
Query: 231 -----GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
GR+ P+V V N + +TVI + +DRP LL D+ +T + +
Sbjct: 830 NSVVGGRMRAIHVPPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHI 889
Query: 285 NTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
T A FY++ V GL + +E + ++ L A+ R E
Sbjct: 890 TTYGVRAVDVFYVKDVFGLKVQNERKLAQLRSALIEALAGRPHE 933
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVV+DN+ TVI+V+ ++ G+L V + L I A+I++ G +DVF V
Sbjct: 843 PPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV 902
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K++++ + ++ L
Sbjct: 903 KDVFGLKVQNERKLAQLRSAL 923
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR GLL D+T L I A I+T G + D FYV DV G
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
>gi|297844622|ref|XP_002890192.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
gi|297336034|gb|EFH66451.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
Length = 290
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ ++S ++ ++ GV+P E H +
Sbjct: 144 KADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHIT 203
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
IE G DRPGL E+ +++D+ V + E T A HV+
Sbjct: 204 IEDDGPNRSLLYIETADRPGLLVELVKIISDISVAVESGEFDTEGLLAKVKFHVS----- 258
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
++ + ++++L N LR +
Sbjct: 259 --YRNKALIKPLQQVLANSLRYF 279
>gi|254436503|ref|ZP_05049997.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
gi|198251949|gb|EDY76263.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
Length = 937
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 39/234 (16%)
Query: 100 FAPSLRS------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
FA LR + + P E+ T + F D PG+FS +C L+ + NVV+A +T
Sbjct: 723 FAQMLRGLGNDEVRINLTPDEDRDATRVCFAMADHPGIFSRMCGALSLVGANVVDARTFT 782
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
D A S G +D RL ++E++ L+G R A + RE+
Sbjct: 783 SKDGFATAAFWVQDSEGTPYEDI-RLPRLREVIERTLKGEVVARDALAGKDK--VKKREK 839
Query: 212 RLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDI 268
I FD+ E YT+I + ++DRP LL D+
Sbjct: 840 AFRVKTSITFDNEGSE-------------------------IYTIIEVDTRDRPGLLHDL 874
Query: 269 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
TL + + ++ T + FY++ + GL ++ +R+ + L AI
Sbjct: 875 TRTLANNNVYIASAVIATYGEQVVDTFYVKDMFGLKYHAQGKRDALENKLHEAI 928
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N++ I A I+T G +V DTFYV D+ G
Sbjct: 860 IEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDMFG 908
>gi|329114652|ref|ZP_08243411.1| uridylyltransferase [Acetobacter pomorum DM001]
gi|326696132|gb|EGE47814.1| uridylyltransferase [Acetobacter pomorum DM001]
Length = 996
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL D+T +L I A I+T G + D FYV D+ G + D K ++
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 391 IRRQI 395
IR ++
Sbjct: 971 IRERL 975
>gi|260425574|ref|ZP_05779554.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
gi|260423514|gb|EEX16764.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
Length = 915
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 108 VGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
+ + P E+ T + F +D PG+FS + L+ + NVV+A +T D A
Sbjct: 714 IDIHPDEDRDATRVCFALSDHPGIFSRLAGALSLVGANVVDARTFTSKDGYATAAFWIQD 773
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRL---HQIMFDDRD 222
+ G + + RL +++++ L G + + + LS I RER I FD+
Sbjct: 774 ADG-SPYEQNRLGRLRDMIRKTLMG--EVKPREAILSKGKIKKRERAFTVPTSITFDNEG 830
Query: 223 YERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 282
E YT+I + ++DRP LL+D+ TL + +
Sbjct: 831 SE-------------------------IYTIIEVDTRDRPGLLYDLTRTLAETNVYIASA 865
Query: 283 MVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
++ T + FY++ + GL + ++++ + + L AA+E
Sbjct: 866 VIATYGEQVVDTFYVKDMFGLKFYTPSKQKTLEKRLRAAME 906
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR E ++ I A I+T G +V DTFYV D+ G
Sbjct: 837 IEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYVKDMFG 885
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V
Sbjct: 821 PTSITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYV 880
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K +++RL
Sbjct: 881 KDMFGLKFYTPSKQKTLEKRL 901
>gi|346994787|ref|ZP_08862859.1| PII uridylyl-transferase [Ruegeria sp. TW15]
Length = 939
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 47/253 (18%)
Query: 94 LETDASFAPSLRS----------SVGVMPTEEHTSIE--FTGTDRPGLFSEVCAVLADLH 141
L T FA L+S + + P E+ + F D PG+FS + LA +
Sbjct: 715 LATHVEFAEMLKSLEDSGDPGAVEIRLHPDEDRDATRACFAMGDHPGIFSRIAGALALVG 774
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
NVV+A +T D + G+ + RL + +++ L+G R A S
Sbjct: 775 ANVVDARSYTTKDGYVTDAFWIQDAEGHPF-EASRLPRLTQMIHKTLKGEVVARDALKSR 833
Query: 202 SPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRS 258
I RER + + FD+ E YT+I + +
Sbjct: 834 DK--IKKRERAFNVPTHVTFDNEGSE-------------------------IYTIIEVDT 866
Query: 259 KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+DRP LL+D+ TL + + ++ T + FY++ + GL SEA++ + L
Sbjct: 867 RDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFGLKYHSEAKQ----RGL 922
Query: 319 EAAIERRASEGLE 331
EA + + EG E
Sbjct: 923 EAKLRKAIVEGAE 935
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V DTFYV D+ G
Sbjct: 862 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFG 910
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 846 PTHVTFDNEGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYV 905
Query: 74 IDCDGKK 80
D G K
Sbjct: 906 KDMFGLK 912
>gi|258542748|ref|YP_003188181.1| PII uridylyl-transferase [Acetobacter pasteurianus IFO 3283-01]
gi|384042669|ref|YP_005481413.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
gi|384051186|ref|YP_005478249.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|384054294|ref|YP_005487388.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|384057528|ref|YP_005490195.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|384060169|ref|YP_005499297.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|384063461|ref|YP_005484103.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|384119471|ref|YP_005502095.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633826|dbj|BAH99801.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01]
gi|256636885|dbj|BAI02854.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|256639938|dbj|BAI05900.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|256642994|dbj|BAI08949.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|256646049|dbj|BAI11997.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|256649102|dbj|BAI15043.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|256652089|dbj|BAI18023.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655146|dbj|BAI21073.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
Length = 996
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL D+T +L I A I+T G + D FYV D+ G + D K ++
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 391 IRRQI 395
IR ++
Sbjct: 971 IRERL 975
>gi|421849578|ref|ZP_16282556.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
gi|371459639|dbj|GAB27759.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
Length = 996
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL D+T +L I A I+T G + D FYV D+ G + D K ++
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 391 IRRQI 395
IR ++
Sbjct: 971 IRERL 975
>gi|357503663|ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497135|gb|AES78338.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+PGL E+ A L +LHCNVV AE+WTHND+A VVHVT+
Sbjct: 854 KPGLRYEIPAFLTELHCNVVAAEMWTHNDKAETVVHVTN 892
>gi|421853162|ref|ZP_16285841.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478622|dbj|GAB31044.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 996
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL D+T +L I A I+T G + D FYV D+ G + D K ++
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 391 IRRQI 395
IR ++
Sbjct: 971 IRERL 975
>gi|385808872|ref|YP_005845268.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
gi|383800920|gb|AFH48000.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
Length = 856
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYAIK 172
+++T+I D P L S++C VLA N+ +A+I+T D +VTD T I
Sbjct: 667 DDYTNITIITKDFPALLSKLCGVLAINDANIHDAKIFTRKDGIVIDTFNVTDFRTHKKI- 725
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 232
DP + I+ L L GY + K + L +R +RL Q +F
Sbjct: 726 DPSKYQKIENDLTKALTGYLEVNKEVSMLK-----SRWKRLEQKLF-------------- 766
Query: 233 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
+S + +V+ N E+ YT+I + S DR L+ I ++++ V+ ++T +
Sbjct: 767 --KRSGQVKVSFDNHER-YTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDDIV 823
Query: 293 QEFYIRHVDGLPISSEAE---RERVIQCLEAAI 322
FY+ + G IS + +E +I +E +
Sbjct: 824 DSFYVLNQSGKKISPSDQAFIKEELINTIEQIL 856
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+++ + DR+G L ITR E L I A+IST G + D+FYV + +G + P I
Sbjct: 785 IDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDDIVDSFYVLNQSGKKISPSDQAFI 844
Query: 392 RRQIGHTKLQV 402
+ ++ +T Q+
Sbjct: 845 KEELINTIEQI 855
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 7 KLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
KL +R +V DN+ T+I V S ++ G L + + ++++ LVI A IS+ G
Sbjct: 764 KLFKRSGQVKVSFDNH--ERYTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDD 821
Query: 67 FMDVFNVIDCDGKKIR-------DKEVIDYIQQRL 94
+D F V++ GKKI +E+I+ I+Q L
Sbjct: 822 IVDSFYVLNQSGKKISPSDQAFIKEELINTIEQIL 856
>gi|399519985|ref|ZP_10760776.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399112382|emb|CCH37335.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 897
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I RIF E LS++ A+I+T+G +V+D F++TD G P+ DP++
Sbjct: 817 LELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDDKGQPLSDPELCAR 876
Query: 389 --DSIRRQIGHTKLQVKRSTI 407
++I R++ +Q + +I
Sbjct: 877 LQETIVRRLSEPSIQPAQFSI 897
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 26/179 (14%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDG------- 78
T I + + ++H + ++ +NL I A I+S + +D + V+D DG
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGNNP 763
Query: 79 ---KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSVGVMPTEEHTSIEFTG 123
++IR+ K DY IQ+R+ +FAP + ++ T +E T
Sbjct: 764 ARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQV--TIHNDAQRPVTILELTA 821
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
DRPGL + + + + ++ NA+I T +R V +TD G + DP+ + ++E
Sbjct: 822 PDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKGQPLSDPELCARLQE 879
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D G+ + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDDKGQPLSDPELCARLQE 879
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 37/219 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 172
E T I D+ F+ A ++ L+ N+ +A I T + +V + G +I
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGN 761
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P R+ I+E L L+ DD+ P I+ R R+L F
Sbjct: 762 NPARIQQIREGLIEALKNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ T++ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
F+I G P+S + L+ I RR SE
Sbjct: 853 RVEDVFFITDDKGQPLSD----PELCARLQETIVRRLSE 887
>gi|347761851|ref|YP_004869412.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
gi|347580821|dbj|BAK85042.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
Length = 965
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L V L++ L I A+I++ G
Sbjct: 854 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 913
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLET---DASFAPSLRSS 107
+DVF V D G KI DKE +D ++ L +A A RSS
Sbjct: 914 RAVDVFYVKDLFGLKITDKERLDRVRTTLLAGLQEAEAAAQRRSS 958
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 31/226 (13%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 757 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 816
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P++L + L+ L G+ + + ++ G RR+ I
Sbjct: 817 FEEPQQLGRLSLLIEQALTGHLNINR---EIAQCGRRLSGRRMRAIHVP----------- 862
Query: 231 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N + TV+ + +DRP LL D+ L++ + + + T
Sbjct: 863 ---------PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 913
Query: 290 EAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASE 328
A FY++ + GL I+ + +RV +Q EAA +RR+SE
Sbjct: 914 RAVDVFYVKDLFGLKITDKERLDRVRTTLLAGLQEAEAAAQRRSSE 959
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 322 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ RAS + E+ DR GLL D+T E L I A I+T G + D FYV D+ G
Sbjct: 867 IDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 926
Query: 381 NPV-DPKIIDSIR 392
+ D + +D +R
Sbjct: 927 LKITDKERLDRVR 939
>gi|349686456|ref|ZP_08897598.1| PII uridylyl-transferase [Gluconacetobacter oboediens 174Bp2]
Length = 954
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 41/231 (17%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 746 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 805
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P++L+ + L+ L G+ + +NRE + +
Sbjct: 806 FEEPQQLARLSLLVEQALTGHLN-------------INRE---------------IAQCG 837
Query: 231 GRVEDKSSR-----PQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
RV + R P+V + N + TV+ + +DRP LL D+ L++ + + +
Sbjct: 838 RRVSGRRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHI 897
Query: 285 NTGRTEAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASE 328
T A FY++ + GL I+ + +R+ +Q EAA +RR+SE
Sbjct: 898 TTYGVRAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRRSSE 948
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L V L++ L I A+I++ G
Sbjct: 843 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 902
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLET---DASFAPSLRSS 107
+DVF V D G KI DK +D I+ L +A A RSS
Sbjct: 903 RAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRRSS 947
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 322 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ RAS + E+ DR GLL D+T E L I A I+T G + D FYV D+ G
Sbjct: 856 IDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 915
Query: 381 NPV-DPKIIDSIR 392
+ D +D IR
Sbjct: 916 LKITDKGRLDRIR 928
>gi|159045373|ref|YP_001534167.1| PII uridylyl-transferase [Dinoroseobacter shibae DFL 12]
gi|157913133|gb|ABV94566.1| [Protein-PII] uridylyltransferase [Dinoroseobacter shibae DFL 12]
Length = 943
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 31/213 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + F D PG+F+ + LA + NVV+A +T D + G D R
Sbjct: 754 TRVSFAMADHPGIFARLAGALALVGANVVDARTYTTKDGYVTACFWVQDADGKPY-DESR 812
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRV 233
L +++++ L G + ++ +S + R+ + I FD+ E
Sbjct: 813 LPRLRKMIDKTLSG--EVVTSQALVSKDKVKKRDAQFRFPTSISFDNEGSE--------- 861
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
YT+I + ++DRP LLFD+ L D V + T +
Sbjct: 862 ----------------IYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVD 905
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
FY++ + GL + EA++ + + L A+E A
Sbjct: 906 TFYVKDMFGLKLHGEAKQRTIEKRLREAVEHGA 938
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L D N+ + A I++ G +D F V
Sbjct: 850 PTSISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYV 909
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + I++RL
Sbjct: 910 KDMFGLKLHGEAKQRTIEKRL 930
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ + + ++ + A+I+T G +V DTFYV D+ G
Sbjct: 866 IEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYVKDMFG 914
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 31/186 (16%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVD-SVNKH-GILLQVIQVLNDV--NLVIKKAYIS 61
A L+R + +V +D AD V +V ++ H GI ++ L V N+V + Y +
Sbjct: 730 AHLLRGIEDDQVRLDLTLDADRDVTRVSFAMADHPGIFARLAGALALVGANVVDARTYTT 789
Query: 62 SDGGWFMDVFNVIDCDGK-----------KIRDK----EVI--------DYIQQRLETDA 98
DG + F V D DGK K+ DK EV+ D +++R DA
Sbjct: 790 KDG-YVTACFWVQDADGKPYDESRLPRLRKMIDKTLSGEVVTSQALVSKDKVKKR---DA 845
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
F S +E +T IE DRPGL ++ LAD + V +A+I T+ +
Sbjct: 846 QFRFPTSISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVD 905
Query: 159 VVHVTD 164
+V D
Sbjct: 906 TFYVKD 911
>gi|358249276|ref|NP_001240278.1| uncharacterized protein LOC100803191 [Glycine max]
gi|255644481|gb|ACU22744.1| unknown [Glycine max]
Length = 294
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 88 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 147
Query: 75 DCD-GKKIRDKEVI---------DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ + E++ + IQ E+ + A L ++ G++P +E ++
Sbjct: 148 KADTGRKVEEPELLEAIRLTIINNLIQYHPESSSRLA--LGAAFGLLPPKEQVDVDIATH 205
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 206 INISDDCPDRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVS--Y 263
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 264 NGKAISKP-----LQQVLANSLRYF 283
>gi|337264724|ref|YP_004608779.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
gi|336025034|gb|AEH84685.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
Length = 933
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 395
DR GLLS+ITR + SL I A I+T G KV DTFYVTD+TG +D P I +IR ++
Sbjct: 855 DRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRL 913
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPARIA 907
Query: 179 TIKELLFNVLRG 190
TI+ L L G
Sbjct: 908 TIRNRLIATLEG 919
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ + L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI I I+ RL
Sbjct: 893 TDLTGQKIDSPARIATIRNRL 913
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 84/218 (38%), Gaps = 28/218 (12%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D P L S + A N+V+A+I+T +D A + +
Sbjct: 733 EAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILISREFDRDEDE 792
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
+R + L+ +VL G S P I R + R +V K R
Sbjct: 793 RRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--------PRRGSKVFKIPPRA 836
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
E +++ + ++VI + DRP LL +I TL+D+ + + T +
Sbjct: 837 EIRNA--------LSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVID 888
Query: 294 EFYIRHVDGLPISSEAE----RERVIQCLEAAIERRAS 327
FY+ + G I S A R R+I LE A R
Sbjct: 889 TFYVTDLTGQKIDSPARIATIRNRLIATLEGAAPERGG 926
>gi|90420550|ref|ZP_01228457.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335278|gb|EAS49031.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 943
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV +DN TVI+V+ +++ G+L V ++D+NL I+ A+IS+ G +DVF V
Sbjct: 836 PRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVT 895
Query: 75 DCDGKKIRDKEVIDYIQQRLE 95
D G KI + I+ I+ RL+
Sbjct: 896 DLIGTKITSETRIERIEVRLK 916
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 100 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
FA R SV + + T IE G DRPGL S+V ++DL+ ++ +A I T+ ++ V
Sbjct: 832 FAVKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDV 891
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
+VTD G I R+ I+ L V F + +S P +M+ +R
Sbjct: 892 FYVTD-LIGTKITSETRIERIEVRLKRV------FESPEGEMSSPVVMSSQR 936
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLSD+T + +L I+ A IST G KV D FYVTD+ G +
Sbjct: 857 DRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVTDLIGTKI 902
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 35/205 (17%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E T I D P L S + A N+ +A+I+T +D A V
Sbjct: 737 EVTEIMVLAPDHPRLLSLIAGACAGTGANIADAQIFTMSDGRALDV-------------- 782
Query: 175 KRLSTIKELLFNVLRGY----DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+L N R + D+ R+A+ + G + + R + + +R R
Sbjct: 783 --------MLLN--REFESDEDEIRRAERICANIGKLLQGREMPASLLANRRPPR----- 827
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
E + +P+V+V N + TVI + DRP LL D+ ++D+ + ++T
Sbjct: 828 -STELFAVKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGE 886
Query: 290 EAYQEFYIRHVDGLPISSEAERERV 314
+ FY+ + G I+SE ER+
Sbjct: 887 KVVDVFYVTDLIGTKITSETRIERI 911
>gi|255564051|ref|XP_002523024.1| amino acid binding protein, putative [Ricinus communis]
gi|223537746|gb|EEF39366.1| amino acid binding protein, putative [Ricinus communis]
Length = 282
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 76 PKVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNVTKANVFLDSSGKHNTFSIT 135
Query: 75 DCD-GKKIRDKEVIDYI---------QQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ I Q E+ + A + + GV P ++ H
Sbjct: 136 KADTGRKVEDPELLEAIRLTIINNLLQYHPESSSQLA--MGVAFGVEPPKQQVDVDIATH 193
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
S+ G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 194 ISVYDDGPDRSLLFVETADRPGLLVDLVKIITDINVAVDSGEFDTEGLLAKAKFHVS--Y 251
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 252 KGKAIIKP-----LQQVLANSLRYF 271
>gi|83313575|ref|YP_423839.1| PII uridylyl-transferase [Magnetospirillum magneticum AMB-1]
gi|82948416|dbj|BAE53280.1| UTP:GlnB (protein PII) uridylyltransferase [Magnetospirillum
magneticum AMB-1]
Length = 929
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 101 APSLRSSVGVMP-TEEHTSIE----FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
A ++R+ + V P + H ++ +TG D PGLFS++ +A N+V+A+I T +
Sbjct: 708 AEAVRAPLTVEPRVDSHRAVTEIIVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANG 766
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A S G A P +L+ + + VL G +T L
Sbjct: 767 MALDTFCIQDSDGGAFDSPAKLAKLATCVEQVLSG-------RTRL-------------- 805
Query: 216 IMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLT 273
DR+ R K R P+V V N+ + +TV+ + +DRP LL+DI +T
Sbjct: 806 ----DRELAARKGKLPSRAHVFKVPPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMT 861
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEG 329
++ + ++T FY++ V G I + +++ L AA+E A++
Sbjct: 862 NVGLQISSAHISTYGERVVDVFYVKDVFGHKIEHGRKLDQIKAALLAALEDPAAKA 917
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L + + +V L I A+IS+ G +DVF V
Sbjct: 826 PPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI +D I+ L
Sbjct: 886 KDVFGHKIEHGRKLDQIKAAL 906
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR GLL DIT L I A IST G +V D FYV DV G+ ++
Sbjct: 842 VEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDVFGHKIE 894
>gi|356550663|ref|XP_003543704.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 290
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 84 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSIT 143
Query: 75 DCD-GKKIRDKEVI---------DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E++ + IQ E+ A A L ++ G++ +E +E
Sbjct: 144 KADSGRKVEDPELLEAIRLTILNNMIQYHPESSAQLA--LGAAFGLVTPKEQVDVEIATH 201
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++ D++ V + E T A A HV
Sbjct: 202 ITISDDGPKRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVN--- 258
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
KD + ++++L N LR +
Sbjct: 259 ----YKDKALIKPLQQVLVNSLRYF 279
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 34/192 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L +L NVV A ++ + +T +G ++DP+
Sbjct: 97 TVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDPEL 156
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSL-------SPPGIMNRERRLHQIMFDDRDYERVEKA 229
L I+ + N + Y A+ +L +P ++ E H + DD
Sbjct: 157 LEAIRLTILNNMIQYHPESSAQLALGAAFGLVTPKEQVDVEIATHITISDD--------- 207
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+ ++L +E + DRP LL D+V +TD+ V G +T
Sbjct: 208 ---------GPKRSLLYVE---------TADRPGLLVDLVKIITDINIAVESGEFDTEGL 249
Query: 290 EAYQEFYIRHVD 301
A +F++ + D
Sbjct: 250 LAKAKFHVNYKD 261
>gi|224284356|gb|ACN39913.1| unknown [Picea sitchensis]
Length = 306
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V ID ++ +ATV++V ++ G LL ++ L D+ L + KA + D + F++
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E ++ I+ + E+ A A + + G++P +E ++ +
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLA--MGEAFGIVPPKEKPDVDISTR 217
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL E+ L+D+ V + E T A A HV+
Sbjct: 218 IHIYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSYR- 276
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G A+ P +++++ N LR +
Sbjct: 277 -GSALIKP-----LQQVVANSLRYF 295
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L DL NVV A ++ + +T TG + DP+
Sbjct: 113 TVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L I+ + N L Y A+ ++ GI+ + + D D R+
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEK------PDVDIST------RIHI 220
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P ++L+IE + DRP LL +IV TL+D+ V G +T A +F
Sbjct: 221 YDDGPNRSLLSIE---------TADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKF 271
Query: 296 YIRH 299
++ +
Sbjct: 272 HVSY 275
>gi|254507884|ref|ZP_05120014.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus 16]
gi|219549257|gb|EED26252.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus 16]
Length = 711
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 517 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 576
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G+ + R K VI ++ L+ P ++++ V +PT+ +
Sbjct: 577 LDQHGEVVDESRHKAVIKHLTHVLQDGRPTKIKTRRVPRNLQHFTVKTQVDFLPTKSKKR 636
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADLH ++ A+I T +RA + +T + G
Sbjct: 637 TLMEFVALDTPGLLATVGATFADLHVHLHAAKITTIGERAEDLFIITSENGG 688
>gi|18394414|ref|NP_564010.1| uridylyltransferase-related protein [Arabidopsis thaliana]
gi|9802776|gb|AAF99845.1|AC051629_12 Unknown protein [Arabidopsis thaliana]
gi|14423502|gb|AAK62433.1|AF386988_1 Unknown protein [Arabidopsis thaliana]
gi|30023784|gb|AAP13425.1| At1g16880 [Arabidopsis thaliana]
gi|332191392|gb|AEE29513.1| uridylyltransferase-related protein [Arabidopsis thaliana]
gi|347949478|gb|AEP31952.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 290
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ ++S ++ ++ GV+P E H +
Sbjct: 144 RADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHIT 203
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
IE G DRPGL E+ +++D+ V + E T A HV+
Sbjct: 204 IEDDGPDRSLLFIESADRPGLLVELVKIISDISVAVESGEFDTEGLLAKVKFHVS----- 258
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
++ + ++++L N LR +
Sbjct: 259 --YRNKALIKPLQQVLANSLRYF 279
>gi|146308076|ref|YP_001188541.1| PII uridylyl-transferase [Pseudomonas mendocina ymp]
gi|421503969|ref|ZP_15950913.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
gi|166990445|sp|A4XWU3.1|GLND_PSEMY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145576277|gb|ABP85809.1| metal dependent phosphohydrolase [Pseudomonas mendocina ymp]
gi|400345070|gb|EJO93436.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
Length = 899
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I RIF E LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTDANNQPLSDPELCAR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQETI 881
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-------------------EVIDYIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E IQ+R+ +FAP + ++
Sbjct: 749 YVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V VTD +
Sbjct: 807 HNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTD-ANN 865
Query: 169 YAIKDPKRLSTIKE 182
+ DP+ + ++E
Sbjct: 866 QPLSDPELCARLQE 879
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DEYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF V D + + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCARLQE 879
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 85/219 (38%), Gaps = 37/219 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + +V + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L L+ D++ P I+ R R+L F
Sbjct: 762 NPARIKQIREGLIEALKNPDEY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ T++ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
F++ + P+S + L+ I RR SE
Sbjct: 853 RVEDVFFVTDANNQPLSD----PELCARLQETIVRRLSE 887
>gi|359780511|ref|ZP_09283737.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
gi|359371823|gb|EHK72388.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
Length = 899
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+EL DR GLL+ + RIF + LS+ A+I+T+G +V+D FYVTD G P+ DP + +
Sbjct: 817 IELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTDADGRPLADPGLCSA 876
Query: 391 IR----RQIGHTKLQVKRSTI 407
++ +Q+G Q S I
Sbjct: 877 LQHALIKQLGEPDSQTPLSRI 897
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCADA---TVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T D+ T I + + ++H + V++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIRETTQRDSEGGTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-------------------KEVIDYIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + +E I +R+ +F+P +
Sbjct: 749 YIVLDTDGGSIGNNPARIAQIRGGLIEALKHPEEYPSIINRRVTRQLKHFAFSPQVNIYT 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
M + + IE T DRPGL + V + D +V+NA+I T +R V +VTD + G
Sbjct: 809 DTMRSA--SLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTD-ADG 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S ++ L L
Sbjct: 866 RPLADPGLCSALQHALIKQL 885
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 33/198 (16%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI- 171
+E T I D+ F+ AV+ L+ N+ +A I T + ++ + G +I
Sbjct: 701 SEGGTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDTYIVLDTDGGSIG 760
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKA 229
+P R++ I+ L L+ +++ P I+NR R+L F
Sbjct: 761 NNPARIAQIRGGLIEALKHPEEY---------PSIINRRVTRQLKHFAFS---------- 801
Query: 230 VGRVEDKSSRPQVTVL-NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
PQV + + + ++I + + DRP LL + D V + + T
Sbjct: 802 ----------PQVNIYTDTMRSASLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLG 851
Query: 289 TEAYQEFYIRHVDGLPIS 306
FY+ DG P++
Sbjct: 852 ERVEDVFYVTDADGRPLA 869
>gi|372271448|ref|ZP_09507496.1| PII uridylyl-transferase [Marinobacterium stanieri S30]
Length = 884
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ T DR GLL+ I RIF E +S+++A+IS+IG +V+D F++TD P+ DP++
Sbjct: 811 LEIITPDRPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFFITDSQNQPISDPELCRE 870
Query: 391 IRRQI 395
+++ I
Sbjct: 871 LQQAI 875
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P R+ I N+ TV+++ + ++ G+L ++ ++ + ++ ++KA ISS G D F +
Sbjct: 795 PTRMTISNDPVVQQTVLEIITPDRPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFFI 854
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D + I D E+ +QQ
Sbjct: 855 TDSQNQPISDPELCRELQQ 873
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDGKKIRDK- 84
AT I + S + + + ++ +NL I+ A I +D G ++ + V+ D + + +
Sbjct: 698 ATEIFIYSEDLPTLFPATVAAMDQLNLNIQDARIILTDHGRTLNTYTVLTDDNQPLSENP 757
Query: 85 EVIDYIQQRLETDAS-------------------FAPSLRSSVGVMPTEEHTSIEFTGTD 125
E + +IQQ L + F R ++ P + T +E D
Sbjct: 758 EYLAHIQQHLTEELDDPEDYPDIIQRRVPRQLKLFTTPTRMTISNDPVVQQTVLEIITPD 817
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
RPGL + + + + +V A+I + +R +TD S I DP+
Sbjct: 818 RPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFFITD-SQNQPISDPE 866
>gi|189218779|ref|YP_001939420.1| UTP:GlnB (protein PII) uridylyltransferase [Methylacidiphilum
infernorum V4]
gi|189185637|gb|ACD82822.1| UTP:GlnB (protein PII) uridylyltransferase [Methylacidiphilum
infernorum V4]
Length = 908
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 27/213 (12%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYA 170
P +H+ + DR G+FS +C A + ++++A+I T D V V YA
Sbjct: 719 PEFDHSEVIIVTWDRLGVFSRICGSFAVVGLSILSADIHTRTDGIVLDVFKVCTSRKEYA 778
Query: 171 IKDPKRLSTIKELLFNVL-RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
++ + S K L L YD F + + PGIM + +++E
Sbjct: 779 CREQYKDSFCKVLEEAFLDESYDIFSR----IPKPGIMEK-----------KEFEGEFPT 823
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
+ + +SS K+YT++ +++ D+P LL+ I L D+ + + T +
Sbjct: 824 SIQFDQQSS----------KNYTILDIQTPDKPALLYRIANALLDLGIEIVSARIATEKG 873
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
A FYI + G ++ E E + +++ L AI
Sbjct: 874 AALDTFYILNSSGNKVTKETEIKEILKNLRKAI 906
>gi|330504246|ref|YP_004381115.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
gi|328918532|gb|AEB59363.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
Length = 898
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I RIF E LS++ A+I+T+G +V+D F++TD G P+ DP+
Sbjct: 817 LELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDDKGQPLSDPEFCAR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQEAI 881
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDG------- 78
T I + + ++H + ++ +NL I A I+S + +D + V+D DG
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGNNP 763
Query: 79 ---KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSVGVMPTEEHTSIEFTG 123
++IR+ K DY IQ+R+ +FAP + ++ T +E T
Sbjct: 764 ARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQV--TIHNDAQRPVTILELTA 821
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRPGL + + + + ++ NA+I T +R V +TD G + DP+ + ++E
Sbjct: 822 PDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKGQPLSDPEFCARLQEA 880
Query: 184 LFNVL 188
+ L
Sbjct: 881 IIAKL 885
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D G+ + D E +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDDKGQPLSDPEFCARLQE 879
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 172
E T I D+ F+ A ++ L+ N+ +A I T + +V + G +I
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGN 761
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P R+ I+E L L+ DD+ P I+ R R+L F
Sbjct: 762 NPARIQQIREGLIEALKNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ T++ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I G P+S
Sbjct: 853 RVEDVFFITDDKGQPLS 869
>gi|144900389|emb|CAM77253.1| Protein-P-II uridylyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 920
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I +D PGLFS++ +A N+V+A+I T + A S G A P +
Sbjct: 726 TEINVYTSDHPGLFSQIAGAMAVSGANIVDAKIVTLANGMALDSFWIQESDGAAFDTPSK 785
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L+ + ++ VL G ++ D R K R
Sbjct: 786 LAKLSTVIEQVLSG------------------------RMRLDKELAARKGKLPARAHVF 821
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V + N +T+I + +DRP LL+D+ +T + + ++T F
Sbjct: 822 KVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVF 881
Query: 296 YIRHVDGLPISSEAERERV 314
Y++ + GL + E + E++
Sbjct: 882 YVKDIFGLKVQHERKLEQI 900
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN + T+I+V+ ++ G+L + + + L I A+IS+ G +DVF V
Sbjct: 824 PPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYV 883
Query: 74 IDCDGKKIRDKEVIDYIQ 91
D G K++ + ++ I+
Sbjct: 884 KDIFGLKVQHERKLEQIR 901
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 30/214 (14%)
Query: 4 EYAKLIR----RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVL--NDVNLVIKK 57
+A+L+R R P V ++ T I V + + G+ Q+ + + N+V K
Sbjct: 698 HHARLVRDAEQRHAPLTVESRIDSFRSVTEINVYTSDHPGLFSQIAGAMAVSGANIVDAK 757
Query: 58 AYISSDGGWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLRSSVGVMP- 112
++ G +D F + + DG + ++ I+Q L L + G +P
Sbjct: 758 -IVTLANGMALDSFWIQESDGAAFDTPSKLAKLSTVIEQVLSGRMRLDKELAARKGKLPA 816
Query: 113 -----------------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ HT IE G DRPGL ++ A + L + +A I T+ +R
Sbjct: 817 RAHVFKVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGER 876
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
V +V D G ++ ++L I++ + LR
Sbjct: 877 VVDVFYVKD-IFGLKVQHERKLEQIRDGVLKALR 909
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 322 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ +AS L E+ DR GLL D+T + L I A IST G +V D FYV D+ G
Sbjct: 829 IDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYVKDIFG 888
Query: 381 NPV 383
V
Sbjct: 889 LKV 891
>gi|452964180|gb|EME69226.1| PII uridylyl-transferase [Magnetospirillum sp. SO-1]
Length = 926
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 31/233 (13%)
Query: 101 APSLRSSVGVMP-TEEHTSIE----FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
A ++R+ + V P + H ++ +TG D PGLFS++ +A N+V+A+I T +
Sbjct: 709 AEAVRAPLTVEPRVDSHRAVTEIVVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANG 767
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A S G A P +L+ + + VL G R R
Sbjct: 768 MALDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSG------------------RAR---- 805
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 274
D R K R P+V V N + +TV+ + +DRP LL+DI +T+
Sbjct: 806 --LDRELAARKGKLPSRAHVFKVPPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTN 863
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
+ + ++T FY++ V G I + E++ L AA+E A+
Sbjct: 864 VGLQISSAHISTYGERVVDVFYVKDVFGHKIEHGRKLEQIKAALLAALEDPAA 916
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L + + +V L I A+IS+ G +DVF V
Sbjct: 827 PPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 886
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE 114
D G KI ++ I+ L A P+ R++ G E
Sbjct: 887 KDVFGHKIEHGRKLEQIKAAL-LAALEDPAARTAAGTKAAE 926
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 71/188 (37%), Gaps = 37/188 (19%)
Query: 234 EDKSSRPQVTV---LNIEKDYTVITMRSKDRPKLLFDIVCTLT-DMQYVVFHGMVNTGRT 289
E ++ R +TV ++ + T I + + D P L I + +V ++
Sbjct: 708 EAEAVRAPLTVEPRVDSHRAVTEIVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANG 767
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL----------------- 332
A F I+ DG S A+ ++ C+E + RA EL
Sbjct: 768 MALDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSGRARLDRELAARKGKLPSRAHVFKVP 827
Query: 333 ----------------ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 376
E+ DR GLL DIT L I A IST G +V D FYV
Sbjct: 828 PRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVK 887
Query: 377 DVTGNPVD 384
DV G+ ++
Sbjct: 888 DVFGHKIE 895
>gi|356575488|ref|XP_003555872.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 282
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ++AT++++ N+ G LL ++ L D+ L + K +S++G F +
Sbjct: 76 PIVLIDQESDSEATIVQLSFGNRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 135
Query: 75 DCD-GKKIRDKEVIDYIQ---------------QRLETDASF---APS------LRSSVG 109
D G+K+ D ++++ I+ + L F AP +++ +
Sbjct: 136 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 195
Query: 110 VMPTEEHTSIEFTGT-DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V S+ + T DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVS--YGG 253
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
A+ S++ ++L N LR Y
Sbjct: 254 AALN-----SSMSQVLVNCLRYY 271
>gi|162147864|ref|YP_001602325.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542483|ref|YP_002274712.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786441|emb|CAP56023.1| putative uridylyltransferase (PII uridylyl transferase)
(Uridylyl-removing enzyme) (UTase) [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530160|gb|ACI50097.1| UTP-GlnB uridylyltransferase, GlnD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 989
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 28/223 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS + LA ++V+A I T + A + G A
Sbjct: 780 LPARGVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAGGEA 839
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P +L+ + L+ L G D K S R R +H
Sbjct: 840 FEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH---------------- 883
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N YTVI + +DRP LL D+ ++D + + + T
Sbjct: 884 -------VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGV 936
Query: 290 EAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 328
A FY++ + GL I+ E RE ++ L A E SE
Sbjct: 937 RAVDVFYVKDLFGLKITDERRLGEIREALLHGLRQAEEAMTSE 979
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V Q ++D L I A+I++ G +DVF V
Sbjct: 885 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 944
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI D+ + I++ L
Sbjct: 945 KDLFGLKITDERRLGEIREAL 965
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 322 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ RAS +E+ DR GLL D+T+ ++ L I A I+T G + D FYV D+ G
Sbjct: 890 IDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFG 949
Query: 381 NPV-DPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 416
+ D + + IR + H Q + + PP E+
Sbjct: 950 LKITDERRLGEIREALLHGLRQAEEAMTSEIGPPAES 986
>gi|443469603|ref|ZP_21059757.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
gi|442899055|gb|ELS25586.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
Length = 900
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I RIF E LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVTDANNQPLSDPELCRR 876
Query: 389 --DSIRRQIGHTKLQVKRST 406
D+I Q+ Q + T
Sbjct: 877 LQDAIVSQLSQANGQGQSPT 896
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 13 NPPRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFM 68
N P V+I + AT I + + ++H + ++ +NL I A I+S + +
Sbjct: 687 NDPLVLIKETAQREFEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTL 746
Query: 69 DVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETD-ASFAPSLRSSV 108
D + V+D DG +I D K DY IQ+R+ FA + ++
Sbjct: 747 DTYIVLDADGGRIGDNPARIREIREGLIDALKNPDDYPAIIQRRVPRQLKHFAFPPQVTI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V VTD +
Sbjct: 807 SNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVTD-ANN 865
Query: 169 YAIKDPK 175
+ DP+
Sbjct: 866 QPLSDPE 872
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPAIIQRRVPRQLKHFAFPPQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA 101
++ A I++ G DVF V D + + + D E+ +Q + + S A
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCRRLQDAIVSQLSQA 888
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + ++ + G I D
Sbjct: 702 EGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYIVLDADGGRIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L + L+ DD+ P I+ R R+L F
Sbjct: 762 NPARIREIREGLIDALKNPDDY---------PAIIQRRVPRQLKHFAFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 802 ---------PQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F++ + P+S
Sbjct: 853 RVEDVFFVTDANNQPLS 869
>gi|254482871|ref|ZP_05096108.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
gi|214036952|gb|EEB77622.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
Length = 880
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ T DR GLL+ I RIF E + ++ A+I T+G +V+D F++TD P+ DP++ ++
Sbjct: 806 LEIATPDRPGLLARIGRIFVEYDIELQAAKIQTLGERVEDVFFITDAKQQPITDPELCEA 865
Query: 391 IRRQI 395
I++ I
Sbjct: 866 IQQAI 870
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 23/194 (11%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVI 74
R +D+N A+ T I + + + + ++ L ++L I A I +++ G +D F V+
Sbjct: 683 RSSLDSN-VANTTQIFIHARSHAQLFSRICAQLEQLDLSIHDARIYNANDGMTLDTFFVL 741
Query: 75 DCDGKKI-RDKEVIDYIQQRL-----ETD--------------ASFAPSLRSSVGVMPTE 114
DGK I D I++I++ L +TD SF+ +++ V +
Sbjct: 742 GSDGKSIAEDSTRINHIREHLSLTLSDTDNARDIVQRRTPRAKKSFSVPTETAMAVDEVK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
++ +E DRPGL + + + + + A+I T +R V +TD + I DP
Sbjct: 802 NYSVLEIATPDRPGLLARIGRIFVEYDIELQAAKIQTLGERVEDVFFITD-AKQQPITDP 860
Query: 175 KRLSTIKELLFNVL 188
+ I++ + + L
Sbjct: 861 ELCEAIQQAICDEL 874
>gi|254282307|ref|ZP_04957275.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
gi|219678510|gb|EED34859.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
Length = 440
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 30/162 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA-YQEFYIRHVDGLPISS-EA 309
T I + ++D+P+LL I L + + + TG A FY+ + DG PI+S EA
Sbjct: 255 TQIFVHAQDKPELLVRICIELELLHLSIHDARIYTGTDGATLNTFYVLNSDGSPIASDEA 314
Query: 310 ERERVIQCLEAAIE--------RRASEGLE--------------------LELCTEDRVG 341
+ + +E + RR L+ LE+ T DR G
Sbjct: 315 NLDYIRSSIETGLASNKSRSSTRRTPRQLKSFVMPTETHIRQDLDRGWTILEVATPDRPG 374
Query: 342 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
LL+ + +F ++ ++++ A+I T+G +V+D F+VTD+ G +
Sbjct: 375 LLARLGALFIDHGVALQSAKIQTLGERVEDVFFVTDMQGRAL 416
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 24/191 (12%)
Query: 21 NNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA--YISSDGGWFMDVFNVIDCDG 78
++ A+ T I V + +K +L+++ L ++L I A Y +DG ++ F V++ DG
Sbjct: 248 DSPVANTTQIFVHAQDKPELLVRICIELELLHLSIHDARIYTGTDGA-TLNTFYVLNSDG 306
Query: 79 KKIRDKEV-IDYIQQRLETDASFAPSLRSSVG---------VMPTEEH---------TSI 119
I E +DYI+ +ET + S RSS VMPTE H T +
Sbjct: 307 SPIASDEANLDYIRSSIETGLASNKS-RSSTRRTPRQLKSFVMPTETHIRQDLDRGWTIL 365
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E DRPGL + + A+ D + +A+I T +R V VTD G A+ + L
Sbjct: 366 EVATPDRPGLLARLGALFIDHGVALQSAKIQTLGERVEDVFFVTDMQ-GRALTNNTTLEH 424
Query: 180 IKELLFNVLRG 190
++ + L G
Sbjct: 425 LQTAIRETLDG 435
>gi|375152168|gb|AFA36542.1| putative amino acid binding protein, partial [Lolium perenne]
Length = 202
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 35/207 (16%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCD 77
+ID ++ DAT++++ ++ G LL ++ L D+ L + K +S+D F+++
Sbjct: 1 LIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTDSSVTQTKFHIMRL- 59
Query: 78 GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSIEFT 122
G+K+ D ++++ I+ + ++S ++ G+ E H +E
Sbjct: 60 GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPENKIDVEVATHVIVEDD 119
Query: 123 G----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
G DRPGL EV ++ D++C+V +AEI T A HV + +
Sbjct: 120 GPKRSMLYIETADRPGLLLEVIKIITDVNCDVESAEIDTEGLVAKDKFHV-------SYR 172
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKT 199
K S++ ++L N LR Y R+ +T
Sbjct: 173 GAKLNSSLSQVLVNCLRYY--LRRPET 197
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 85/215 (39%), Gaps = 38/215 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T ++ + DR G + L DL +V + T + H+ G ++DP
Sbjct: 11 TIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTDSSVTQTKFHIM--RLGRKVEDPDM 68
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSL-------SPPGIMNRERRLHQIMFDDRDYERVEKA 229
L TI+ + N L Y K ++ +P ++ E H I+ DD
Sbjct: 69 LETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPENKIDVEVATHVIVEDDG-------- 120
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+ ++L IE + DRP LL +++ +TD+ V ++T
Sbjct: 121 ----------PKRSMLYIE---------TADRPGLLLEVIKIITDVNCDVESAEIDTEGL 161
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
A +F++ + G ++S + ++ CL + R
Sbjct: 162 VAKDKFHVSY-RGAKLNSSLS-QVLVNCLRYYLRR 194
>gi|392955012|ref|ZP_10320563.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
gi|391857669|gb|EIT68200.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
Length = 894
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL T DR GLLS I RIF++ L + A+I TIG + +D F++TD P+ DP +D
Sbjct: 820 LELVTADRPGLLSMIGRIFQKRGLLLDAAKIGTIGERAEDVFFITDADHKPISDPSQLDE 879
Query: 391 IR 392
+R
Sbjct: 880 LR 881
>gi|399912538|ref|ZP_10780852.1| PII uridylyl-transferase [Halomonas sp. KM-1]
Length = 893
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 384
A+E LEL DR GLL+ + RIF E +S+ A+I+T+G +V+D F++TD +G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITDKSGAPLTD 874
Query: 385 PKIIDSIRRQI 395
P+ +R ++
Sbjct: 875 PERQQRLRARL 885
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD I+ I+ L E D
Sbjct: 729 AMEQLGLSIHDARIATSSNDWTLNTFIVLDDLGRAIRDPARIEEIRAHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + ++
Sbjct: 789 QIVTRHTPRQLRHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +TD S G + DP+R ++ L VL
Sbjct: 849 AKIATLGERVEDVFFITDKS-GAPLTDPERQQRLRARLIEVL 889
>gi|170723245|ref|YP_001750933.1| PII uridylyl-transferase [Pseudomonas putida W619]
gi|229487482|sp|B1JBR2.1|GLND_PSEPW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169761248|gb|ACA74564.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida W619]
Length = 900
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ I RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQIGHTKLQVKRSTILAP 410
++ I +LQ +++ +P
Sbjct: 877 LQEAIVQ-QLQAGQASDASP 895
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFNFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL I + + + + T
Sbjct: 802 ---------PQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 327
F+I D P+S +E ++Q L+A AS
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQASDAS 894
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|301058658|ref|ZP_07199659.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
gi|300447222|gb|EFK10986.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
Length = 878
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHST-GYAI 171
E I F DRPG+FS + VLA NVV A I+T D + T H+ +A+
Sbjct: 691 ESCVDITFMSKDRPGIFSRMAGVLAINRINVVAANIYTWGDGTVVDIFKATPHADRHHAL 750
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+ K++ E +V RG + +DR E+ + ++
Sbjct: 751 EVWKKVQKDAE---DVFRG------------------------NLSLEDRLKEKAKPSIL 783
Query: 232 RVEDKSSR-PQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
E K S P++ V N D+ T+I + + +R LL+DI TL ++ + + T
Sbjct: 784 DSEYKPSHAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKAD 843
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCL 318
+ FY+R ++G + E E R+++ L
Sbjct: 844 QVADVFYVRDLEGQKVEDEKETARIVETL 872
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 322 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+ RAS+ L E+ ++RVGLL DITR E L I+ A+I+T +V D FYV D+ G
Sbjct: 797 VNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFYVRDLEG 856
Query: 381 NPVD-----PKIIDSIRRQIG 396
V+ +I++++ +++G
Sbjct: 857 QKVEDEKETARIVETLNKKLG 877
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D EY + + P+++++N T+I+V + N+ G+L + + L ++ L I+ A I
Sbjct: 783 LDSEY----KPSHAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKI 838
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKE 85
++ DVF V D +G+K+ D++
Sbjct: 839 ATKADQVADVFYVRDLEGQKVEDEK 863
>gi|242084772|ref|XP_002442811.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
gi|241943504|gb|EES16649.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
Length = 273
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 128
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFTG---- 123
G+K+ D ++++ I+ + ++S ++ G+ P E+ ++
Sbjct: 129 RS-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKAVVDIATRIVI 187
Query: 124 --------------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNVDVESAEIDTEGLVAKDKFHVS------ 241
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ + L N LR Y R+ +T
Sbjct: 242 -YRGAKLNSSLSQALINCLRYY--LRRPET 268
>gi|17226253|gb|AAL37712.1|AF397025_2 uridylyltransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 990
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 28/223 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS + LA ++V+A I T + A + G A
Sbjct: 781 LPARGVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAGGEA 840
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P +L+ + L+ L G D K S R R +H
Sbjct: 841 FEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH---------------- 884
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N YTVI + +DRP LL D+ ++D + + + T
Sbjct: 885 -------VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGV 937
Query: 290 EAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 328
A FY++ + GL I+ E RE ++ L A E SE
Sbjct: 938 RAVDVFYVKDLFGLKITDERRLGEIREALLHGLRQAEEAMTSE 980
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V Q ++D L I A+I++ G +DVF V
Sbjct: 886 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 945
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI D+ + I++ L
Sbjct: 946 KDLFGLKITDERRLGEIREAL 966
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 322 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ RAS +E+ DR GLL D+T+ ++ L I A I+T G + D FYV D+ G
Sbjct: 891 IDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFG 950
Query: 381 NPV-DPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 416
+ D + + IR + H Q + + PP E+
Sbjct: 951 LKITDERRLGEIREALLHGLRQAEEAMTSEIGPPAES 987
>gi|422297483|ref|ZP_16385118.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
gi|407991091|gb|EKG33029.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
Length = 788
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 706 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 765
Query: 391 IRRQI 395
++ I
Sbjct: 766 LQEAI 770
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 578 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 637
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 638 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 695
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 696 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 754
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 755 QPLSDPQLCSQLQEAIVKQL 774
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 591 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 650
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 651 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 689
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 690 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 741
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 742 RVEDVFFITDANNQPLS 758
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 670 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 729
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + + D ++ +Q+ +L ++ LR S+
Sbjct: 730 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQEAIVKQLSVNSEPGGDLRISI 788
>gi|422657758|ref|ZP_16720197.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331016365|gb|EGH96421.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 898
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQEAI 880
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSQLQEAIVKQL 884
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNQPLS 868
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + + D ++ +Q+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQE 878
>gi|28868738|ref|NP_791357.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969116|ref|ZP_03397255.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|301383989|ref|ZP_07232407.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato Max13]
gi|302061957|ref|ZP_07253498.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato K40]
gi|302134052|ref|ZP_07260042.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|38257473|sp|Q886P5.1|GLND_PSESM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28851977|gb|AAO55052.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926114|gb|EEB59670.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 898
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQEAI 880
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSQLQEAIVKQL 884
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNQPLS 868
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + + D ++ +Q+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQE 878
>gi|312883806|ref|ZP_07743525.1| PII uridylyl-transferase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368555|gb|EFP96088.1| PII uridylyl-transferase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 877
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N T + V S ++ + +V+ LN NL + A + +S G+ +D F V
Sbjct: 677 PLVLVSKNATRGGTEVFVYSKDQQALFARVVAELNRRNLNVHDAQVMTSKDGFILDTFMV 736
Query: 74 IDCDGKKI---RDKEVIDYIQQRL------ETDASFAPS------LRSSVGVMPT--EEH 116
+D GK + R + ++ I + L + A AP +++ +PT ++H
Sbjct: 737 LDNKGKALEANRQQTIVKNITKALADSKPLKIKARRAPKNLQHFKVKTRAEFLPTKHQKH 796
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ +EF D PGL +++ A ++L ++ A+I T +RA + +T G
Sbjct: 797 SLLEFIALDTPGLLAKIGATFSELGIHLHAAKITTIGERAEDLFIITGEEKG 848
>gi|260574117|ref|ZP_05842122.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
gi|259023583|gb|EEW26874.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
Length = 914
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+FS + LA + N+V+A +T D A V S G + RL +
Sbjct: 729 FALHDHPGIFSRLAGALALVGANIVDARTYTSKDGYATAVFWVQDSEGRPY-EVARLPRL 787
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRL-HQIMFDDRDYERVEKAVGRVEDKSSR 239
+ ++ L+G R+A RE R I FD+ E
Sbjct: 788 RGMIDKTLKGEVLPREALADRDKVKKREREFRFPTHITFDNEGSE--------------- 832
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
YT+I + ++DRP LL+D+ TL + ++ T + FY++
Sbjct: 833 ----------IYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKD 882
Query: 300 VDGLPISSEAERERVIQCLEAAIERRASEGLE 331
+ GL + ++A++E LE + + +EG E
Sbjct: 883 MFGLKLHTKAKQE----ALETKLRQAIAEGAE 910
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 837 IEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKDMFG 885
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 821 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYV 880
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++ +L
Sbjct: 881 KDMFGLKLHTKAKQEALETKL 901
>gi|296115100|ref|ZP_06833741.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295978201|gb|EFG84938.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 952
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 25/231 (10%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E++A +P L +P T + D PGLFS + +A ++V+A I T +
Sbjct: 729 ESEARHSP-LTVESQPIPARGVTEVTIYAADHPGLFSRIAGAVAIAGASIVDARIHTMTN 787
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + G A ++P++L+ + L+ L G + K S G R R +H
Sbjct: 788 GMALDTLWVQDADGAAFEEPQQLARLSMLVEQALSGQLNISKEIASCGRRGSGRRMRAIH 847
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLT 273
P+V + N + TV+ + +DRP LL DI T++
Sbjct: 848 -----------------------VPPRVVIDNRASNACTVVEINGRDRPGLLHDITATIS 884
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
D + + + T A FY++ + GL I+ +A E + Q L A +++
Sbjct: 885 DQKLQIASAHITTYGVRAVDVFYVKDLFGLKITDKARLETIRQTLLAGLQK 935
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TV++++ ++ G+L + ++D L I A+I++ G +DVF V
Sbjct: 849 PPRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYV 908
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK ++ I+Q L
Sbjct: 909 KDLFGLKITDKARLETIRQTL 929
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 322 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ RAS + E+ DR GLL DIT + L I A I+T G + D FYV D+ G
Sbjct: 854 IDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYVKDLFG 913
Query: 381 NPVDPKIIDSIRRQIGHTKLQVKRSTILA 409
KI D R L+ R T+LA
Sbjct: 914 L----KITDKAR-------LETIRQTLLA 931
>gi|116786655|gb|ABK24191.1| unknown [Picea sitchensis]
gi|148908416|gb|ABR17321.1| unknown [Picea sitchensis]
Length = 306
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V ID ++ +ATV++V ++ G LL + L D+ L + KA + D + F++
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E ++ I+ + E+ A A + + G++P +E ++ +
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLA--MGEAFGIVPPKEKPDVDISTR 217
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL E+ L+D+ V + E T A A HV+
Sbjct: 218 IHIYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSYR- 276
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G A+ P +++++ N LR +
Sbjct: 277 -GSALIKP-----LQQVVANSLRYF 295
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L DL NVV A ++ + +T TG + DP+
Sbjct: 113 TVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L I+ + N L Y A+ ++ GI+ + + D D R+
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEK------PDVDIST------RIHI 220
Query: 236 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P ++L+IE + DRP LL +IV TL+D+ V G +T A +F
Sbjct: 221 YDDGPNRSLLSIE---------TADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKF 271
Query: 296 YIRH 299
++ +
Sbjct: 272 HVSY 275
>gi|289626037|ref|ZP_06458991.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651446|ref|ZP_06482789.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422582741|ref|ZP_16657874.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|298157152|gb|EFH98240.1| [Protein-PII] uridylyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330867581|gb|EGH02290.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 898
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQDAI 880
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 898
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 760
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|422608963|ref|ZP_16680922.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
gi|330894590|gb|EGH27251.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
Length = 898
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQDAI 880
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 898
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V D+ G +
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSSGD 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|422594799|ref|ZP_16669089.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330985106|gb|EGH83209.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 898
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQDAI 880
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 898
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 760
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|71735709|ref|YP_275980.1| PII uridylyl-transferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|416025723|ref|ZP_11569371.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|91206748|sp|Q48F57.1|GLND_PSE14 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|71556262|gb|AAZ35473.1| protein-P-II uridylyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320329606|gb|EFW85595.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 898
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQDAI 880
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 898
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 760
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|416018072|ref|ZP_11565073.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320323122|gb|EFW79211.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
Length = 898
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQDAI 880
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I D +E+ + + + L +FAP + ++
Sbjct: 748 YIVLDNEGGSIGDNPERAQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLST-----IKELLFNVLRGYD 192
+ + DP+ S +K+L N G+D
Sbjct: 865 HPLSDPQLCSQLQDAIVKQLSVNSEPGHD 893
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 898
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 760
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERAQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|242039737|ref|XP_002467263.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
gi|241921117|gb|EER94261.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
Length = 280
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 75 PKVIIDQDSDPDATIVEITLGDRLGELLDTMNALKNLGLNVVKASVCLDSTGKHNKFSIT 134
Query: 75 DCD-GKKIRDKEVIDYIQ---------------QRLETDASFAPS---------LRSSVG 109
G+KI D E+++ I+ +L A+F P + + +
Sbjct: 135 KASTGRKIDDPELLEAIRLTIINNMLVYHPESSSQLAMGATFGPEAPTEEVDVDIATHID 194
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ E + + DRPGL ++ +++D++ NV + E T A A HV+
Sbjct: 195 IYDGPERSLLVVETADRPGLLVDLVKIISDININVQSGEFDTEGLLAKAKFHVS------ 248
Query: 170 AIKDPKRLSTIKELLFNVLRGY 191
+ + +K++L N LR +
Sbjct: 249 -YRGKPLMEALKQVLSNSLRYF 269
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 21/185 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + L +L NVV A + + +T STG I DP
Sbjct: 86 DATIVEITLGDRLGELLDTMNALKNLGLNVVKASVCLDSTGKHNKFSITKASTGRKIDDP 145
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
+ L I+ + N + Y ++ ++ + E V+ +
Sbjct: 146 ELLEAIRLTIINNMLVYHPESSSQLAMG------------ATFGPEAPTEEVDVDIATHI 193
Query: 235 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
D P+ ++L +E + DRP LL D+V ++D+ V G +T A +
Sbjct: 194 DIYDGPERSLLVVE---------TADRPGLLVDLVKIISDININVQSGEFDTEGLLAKAK 244
Query: 295 FYIRH 299
F++ +
Sbjct: 245 FHVSY 249
>gi|293334853|ref|NP_001169848.1| uncharacterized protein LOC100383740 [Zea mays]
gi|224031989|gb|ACN35070.1| unknown [Zea mays]
gi|414882134|tpg|DAA59265.1| TPA: hypothetical protein ZEAMMB73_925280 [Zea mays]
Length = 270
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P E+ H +
Sbjct: 126 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 238
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ + L N LR Y R+ +T
Sbjct: 239 -YRGGKLNSSLSQALTNCLRYY--LRRPET 265
>gi|89092087|ref|ZP_01165042.1| PII uridylyl-transferase [Neptuniibacter caesariensis]
gi|89083822|gb|EAR63039.1| PII uridylyl-transferase [Oceanospirillum sp. MED92]
Length = 899
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ T DR GLL+ I IF ++LS+++A+I+++G +V+D F++TD G P+ DP++
Sbjct: 823 LEVITPDRPGLLARIGGIFAAHNLSVRKAKIASVGERVEDFFFITDEQGLPISDPELCQQ 882
Query: 391 IRRQI 395
++ +I
Sbjct: 883 LQNEI 887
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +V + N+ A TV++V + ++ G+L ++ + NL ++KA I+S G D F +
Sbjct: 807 PTQVFLSNDAIAHQTVLEVITPDRPGLLARIGGIFAAHNLSVRKAKIASVGERVEDFFFI 866
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G I D E+ +Q +
Sbjct: 867 TDEQGLPISDPELCQQLQNEI 887
>gi|410663631|ref|YP_006916002.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025988|gb|AFU98272.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
Length = 897
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LE+ + DR GLL+ I R+F ++ + ++ A+I+T+G +V+D F++TD GNP+ DP +
Sbjct: 821 LEVISPDRPGLLAAIGRVFLQHGIQLQNAKIATLGERVEDIFFITDHDGNPLSDPAQCEQ 880
Query: 387 IIDSIRRQI 395
+ D+IR+ +
Sbjct: 881 LQDNIRKAL 889
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 28/202 (13%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
P ++I + A AT I V + +++ + L+ + L I+ A I SS G+ +D
Sbjct: 695 PLILIRQSRIAGMEGATQIFVRTKDQNNVFAAAANALSGLQLDIQDARIYSSPDGYTIDT 754
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG----------VMPTEEHTS-- 118
F V+D +G+ + D I++ L + + S + MP+ S
Sbjct: 755 FFVLDENGEPT-SPDRFDLIRRALLDELALVNSYPEIISRRTPRMLKHFSMPSRTRLSND 813
Query: 119 -------IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
+E DRPGL + + V + NA+I T +R + +TDH G +
Sbjct: 814 LIAGTSVLEVISPDRPGLLAAIGRVFLQHGIQLQNAKIATLGERVEDIFFITDHD-GNPL 872
Query: 172 KDPKRLSTIKELLFNVLRGYDD 193
DP + +++ N+ + DD
Sbjct: 873 SDPAQCEQLQD---NIRKALDD 891
>gi|422671223|ref|ZP_16730589.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330968963|gb|EGH69029.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 898
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPK 175
+ + DP+
Sbjct: 864 NHPLSDPQ 871
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEPGNDLRISI 898
>gi|339486111|ref|YP_004700639.1| PII uridylyl-transferase [Pseudomonas putida S16]
gi|338836954|gb|AEJ11759.1| PII uridylyl-transferase [Pseudomonas putida S16]
Length = 897
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 814 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 873
Query: 391 IRRQIGHTKLQVKRSTILAP 410
++ I +LQ +++ +P
Sbjct: 874 LQEAIVQ-QLQAGQASDASP 892
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 864
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 865 LSDPQLCSRLQEAIVQQLQA 884
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 699 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 758
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 759 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 798
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 799 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 849
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 327
F+I D P+S +E ++Q L+A AS
Sbjct: 850 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQASDAS 891
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 858 TDADNQPLSDPQLCSRLQE 876
>gi|294676023|ref|YP_003576638.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
gi|294474843|gb|ADE84231.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
Length = 920
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 96 TDASFAPSLRS------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
T A FA LR + + P +H T F +D PG+FS + LA + NVV+A
Sbjct: 701 THAIFAEMLRGLGDDEIRIDLDPDLDHDATRAAFALSDHPGIFSRLAGALALVGANVVDA 760
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+T D A V S G+ + K L ++ ++ L+G R A
Sbjct: 761 RTYTSKDGYATAVFWVQDSEGHPYEATK-LPRLRGMIEKTLKGEVVARDA---------- 809
Query: 208 NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLF 266
DRD K R + +T N D YT++ + ++DRP LL+
Sbjct: 810 ----------LKDRD-----KIKKREREFRFPTHITFDNEGSDIYTIVEVDTRDRPGLLY 854
Query: 267 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
D+ L + ++ T + FY++ + GL + S +E + + L AI R A
Sbjct: 855 DLTRALASSNIYIASAVIATYGAQVVDTFYVKDMFGLKLHSGQRQESLEKRLRDAIIRGA 914
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 842 VEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYVKDMFG 890
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+++VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 826 PTHITFDNEGSDIYTIVEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + +++RL
Sbjct: 886 KDMFGLKLHSGQRQESLEKRL 906
>gi|431801156|ref|YP_007228059.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
gi|430791921|gb|AGA72116.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
Length = 900
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQIGHTKLQVKRSTILAP 410
++ I +LQ +++ +P
Sbjct: 877 LQEAIVQ-QLQAGQASDASP 895
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 327
F+I D P+S +E ++Q L+A AS
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQASDAS 894
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|66044589|ref|YP_234430.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae B728a]
gi|75503002|sp|Q4ZWT0.1|GLND_PSEU2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|63255296|gb|AAY36392.1| Protein-P-II uridylyltransferase [Pseudomonas syringae pv. syringae
B728a]
Length = 898
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPK 175
+ + DP+
Sbjct: 864 NHPLSDPQ 871
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEPGNDLRISI 898
>gi|343513795|ref|ZP_08750890.1| PII uridylyl-transferase [Vibrio sp. N418]
gi|342801414|gb|EGU36880.1| PII uridylyl-transferase [Vibrio sp. N418]
Length = 874
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+ L+R +P P V+I T + V ++H + V+ L+ N + A + +S
Sbjct: 668 SHLLRHDDPSKPLVLISEKATRGGTEVFVYHKDQHALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETD------ASFAP------SLRSS 107
G+ +D F V+D G I R K VI ++ L+ P ++++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFTVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +P++ + T++EF D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLNINLHAAKITTIGERAEDLFIITGT 847
Query: 166 STGYAIKDPKRL 177
G + K L
Sbjct: 848 EGGKLSEQEKSL 859
>gi|422645648|ref|ZP_16708783.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959197|gb|EGH59457.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 898
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQEAI 880
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTYREFDGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSQLQEAIVKQL 884
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102
++ A I++ G DVF + D + + + D ++ +Q+ + S P
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQEAIVKQLSVNP 888
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 33/194 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIKDPK 175
T I D+ F+ A + L+ N+ +A I T + + + V DH G +P+
Sbjct: 704 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGNNPE 763
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAVGRV 233
R+ I++ L L DD+ P I+ R R+L F
Sbjct: 764 RIQDIRDGLTEALHNPDDY---------PTIIKRRVPRQLKHFAF--------------- 799
Query: 234 EDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 800 -----APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVE 854
Query: 293 QEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 855 DVFFITDANNQPLS 868
>gi|407787724|ref|ZP_11134863.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
gi|407199003|gb|EKE69027.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
Length = 940
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F TD G+FS + LA + NVV+A +T D A V + G + RL +
Sbjct: 754 FALTDHHGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWIQDNDGNPFEQA-RLPRL 812
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
++++ +LRG R+A D RD + + E K P
Sbjct: 813 RQMIDKILRGEMGARQA--------------------LDSRD------KIKKRESKFRVP 846
Query: 241 QVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
+ E +T+I + ++DRP LL+D+ L + + T + FY++
Sbjct: 847 TSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVK 906
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRA 326
+ G+ SE++R + + L AI++ A
Sbjct: 907 DMFGMKFHSESKRRTLEKKLREAIDQGA 934
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR+ N++SI A+I+T G +V D FYV D+ G
Sbjct: 862 IEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVKDMFG 910
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + +VL N+ I A I++ G +DVF V
Sbjct: 846 PTSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYV 905
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K + ++++L
Sbjct: 906 KDMFGMKFHSESKRRTLEKKL 926
>gi|427409438|ref|ZP_18899640.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
gi|425711571|gb|EKU74586.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
Length = 918
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 26/230 (11%)
Query: 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
SL + P T + TD PGLF + + N+++A I T D A +
Sbjct: 712 SLSIAAQYYPQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFL 771
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
G A P++L+ IK + + SLS NR R + ++ + R
Sbjct: 772 VQDPLGGAFHSPEQLARIKAAI-------------EDSLS-----NRHRMITKL--EARP 811
Query: 223 YERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 281
R R+E P V + N + +TVI + ++DRP LLF + L + V
Sbjct: 812 LPRTRAEAFRIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHS 866
Query: 282 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
V T A FY+ + G I S+A + + + L A E LE
Sbjct: 867 AHVATYGERAVDTFYVTDLLGGKIESKARLQTLERRLLEAAGGEVGEALE 916
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 824 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI K + +++RL
Sbjct: 884 DLLGGKIESKARLQTLERRL 903
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
+E+ DR LL + ++ +++ A ++T G + DTFYVTD+ G ++ K
Sbjct: 839 IEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVTDLLGGKIESK 893
>gi|404398828|ref|ZP_10990412.1| PII uridylyl-transferase [Pseudomonas fuscovaginae UPB0736]
Length = 900
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTDAQNQPLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQDAI 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + V++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPKRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V VTD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTD-AQN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S +++ + L
Sbjct: 866 QPLSDPQLCSRLQDAIVEQL 885
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ AV+ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
PKR+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPKRVKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F++ P+S
Sbjct: 853 RVEDVFFVTDAQNQPLS 869
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF V D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDAQNQPLSDPQLCSRLQ 878
>gi|257487087|ref|ZP_05641128.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 403
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 321 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 380
Query: 391 IRRQI 395
++ I
Sbjct: 381 LQDAI 385
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 285 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 344
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ D I ++L ++ LR S+
Sbjct: 345 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 403
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 206 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 265
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 266 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 304
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 305 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 356
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 357 RVEDVFFITDANNHPLS 373
>gi|302187896|ref|ZP_07264569.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae 642]
Length = 898
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPK-----RLSTIKELLFNVLRGYD 192
+ + DP+ + + +K+L N +G D
Sbjct: 864 NHPLSDPQLCRQLQDAIVKQLSVNSEQGSD 893
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEQGSDLRISI 898
>gi|422638289|ref|ZP_16701720.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
gi|330950684|gb|EGH50944.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
Length = 898
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEPGGDLRISI 898
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPK 175
+ + DP+
Sbjct: 864 NHPLSDPQ 871
>gi|440744204|ref|ZP_20923508.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
gi|440374218|gb|ELQ10954.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
Length = 898
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 748 YIVLDNEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPK 175
+ + DP+
Sbjct: 864 NHPLSDPQ 871
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEPGGDLRISI 898
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V D+ G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|381199347|ref|ZP_09906497.1| PII uridylyl-transferase [Sphingobium yanoikuyae XLDN2-5]
Length = 920
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 26/230 (11%)
Query: 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
SL + P T + TD PGLF + + N+++A I T D A +
Sbjct: 714 SLSIAAQYYPQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFL 773
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
G A P++L+ IK + + SLS NR R + ++ + R
Sbjct: 774 VQDPLGGAFHSPEQLARIKAAI-------------EDSLS-----NRHRMITKL--EARP 813
Query: 223 YERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 281
R R+E P V + N + +TVI + ++DRP LLF + L + V
Sbjct: 814 LPRTRAEAFRIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHS 868
Query: 282 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
V T A FY+ + G I S+A + + + L A E LE
Sbjct: 869 AHVATYGERAVDTFYVTDLLGGKIESKARLQTLERRLLEAAGGEVGEALE 918
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI K + +++RL
Sbjct: 886 DLLGGKIESKARLQTLERRL 905
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
+E+ DR LL + ++ +++ A ++T G + DTFYVTD+ G ++ K
Sbjct: 841 IEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVTDLLGGKIESK 895
>gi|341613492|ref|ZP_08700361.1| PII uridylyl-transferase [Citromicrobium sp. JLT1363]
Length = 918
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKE 85
AT++ V + + GI +++ ++ V I A I ++ G+ +D F V D G++ +
Sbjct: 725 ATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGQRFGEDN 784
Query: 86 VIDYIQQR----LETDASFAPSL---------------RSSVGVMPTEEH--TSIEFTGT 124
++ I++ LE A P L R SV H T IE +
Sbjct: 785 QLERIERSIADALERGAQLVPKLAQRPLPRRGAGAFDVRPSVAFDNDASHRFTVIEVSAR 844
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRP L + + L + H + +A I + +RAA +VTD TG I DP RL TI+ L
Sbjct: 845 DRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVTD-LTGDKITDPSRLETIRAAL 903
Query: 185 FNV 187
+
Sbjct: 904 VDA 906
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 34/179 (18%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPIS 306
E+ T++T+ + D P + I + + + ++T RT A F ++ G
Sbjct: 722 ERGATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGQRFG 781
Query: 307 SEAERERVIQCLEAAIER---------------RASEGLE-----------------LEL 334
+ + ER+ + + A+ER R + + +E+
Sbjct: 782 EDNQLERIERSIADALERGAQLVPKLAQRPLPRRGAGAFDVRPSVAFDNDASHRFTVIEV 841
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIR 392
DR LL+ + R E+ I+ A I+ G + DTFYVTD+TG+ + DP +++IR
Sbjct: 842 SARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVTDLTGDKITDPSRLETIR 900
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V DN+ TVI+V + ++ +L ++ + L + + +I+ A+I+ G D F V
Sbjct: 824 PSVAFDNDASHRFTVIEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI D ++ I+ L AS
Sbjct: 884 DLTGDKITDPSRLETIRAALVDAAS 908
>gi|296080993|emb|CBI18591.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 103/212 (48%), Gaps = 34/212 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ + AT++++ ++ G L+ ++ L ++L ++K ++++G F +
Sbjct: 96 PMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFIT 155
Query: 75 DCDGKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTSI 119
DG+K+ D ++++ I+ + ++S ++ + G+ E+ H +
Sbjct: 156 RIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIHV 215
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ G DRPGL E+ ++ D++ +V +AEI T A HV+ G
Sbjct: 216 KDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVS--YRGA 273
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ +++ N LR Y R+ +T +
Sbjct: 274 ALS-----SSLSQVMINSLRYY--LRRPETEV 298
>gi|104783197|ref|YP_609695.1| PII uridylyl-transferase [Pseudomonas entomophila L48]
gi|122402173|sp|Q1I624.1|GLND_PSEE4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|95112184|emb|CAK16911.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl removing enzyme) (UTase)
[Pseudomonas entomophila L48]
Length = 900
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ I RIF E +S++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQIGHTKLQVKRSTILAP 410
++ I +LQ +++ +P
Sbjct: 877 LQEAIIQ-QLQAGQASEASP 895
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + + +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L T + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRTPEDYPAIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIIQQLQA 887
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A +A L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRTPEDY---------PAIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL I + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 327
F+I D P+S +E +IQ L+A AS
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIIQQLQAGQASEAS 894
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + ++ ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|407781039|ref|ZP_11128259.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
gi|407208465|gb|EKE78383.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
Length = 973
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN A TVI+++ ++ G+L + + LN ++L + A IS+ G +DVF V
Sbjct: 863 PPRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYV 922
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSV 108
D G K+ + I+++L T + S+ +S
Sbjct: 923 KDVFGLKVEHASKLAAIREKLLTALAEPGSVSASA 957
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 28/207 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D PGLFS + +A ++V+A I+T D A +T P +
Sbjct: 764 TEVTICTPDHPGLFSRLAGAMAVAGASIVDARIFTMTDGMALDTFWVQDATDGPFDQPTK 823
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L+ + + + G R+A + + +R R V +V
Sbjct: 824 LARLSAAIHKAMSGELKTRQALREKAAGALPSRTR------------------VFKVP-- 863
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V + N +TVI + +DRP LL DI L + V ++T A F
Sbjct: 864 ---PRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVF 920
Query: 296 YIRHVDGLPISSEAE----RERVIQCL 318
Y++ V GL + ++ RE+++ L
Sbjct: 921 YVKDVFGLKVEHASKLAAIREKLLTAL 947
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL S++ L L V +A+I T+ + A V +V D G ++
Sbjct: 876 HTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKD-VFGLKVEHAS 934
Query: 176 RLSTIKELLFNVL 188
+L+ I+E L L
Sbjct: 935 KLAAIREKLLTAL 947
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+EL DR GLLSDI R + SL + A+IST G D FYV DV G V+
Sbjct: 879 IELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKDVFGLKVE 931
>gi|410089166|ref|ZP_11285792.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
gi|409763453|gb|EKN48413.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
Length = 899
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 817 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNHPLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQEAI 881
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 748
Query: 71 FNVIDCDGKKIRDKEV-IDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I D V + I++ L T+A +FAP + +
Sbjct: 749 YIVLDNEGGSIGDNPVRVQEIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ + DP+ S ++E + L
Sbjct: 865 NHPLSDPQLCSRLQEAIIKQL 885
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + D ++ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNHPLSDPQLCSRLQE 879
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPVRVQEIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNHPLS 869
>gi|288958557|ref|YP_003448898.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
gi|288910865|dbj|BAI72354.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
Length = 947
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L+++ L I A IS+ G +DVF V
Sbjct: 840 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYV 899
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 900 KDVFGLKVTHEGKLAKIKERL 920
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 37/213 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + TD GLFS + LA ++V+A I+T + A V + G A + +
Sbjct: 742 TEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDAAGGAFESSDK 801
Query: 177 LSTIKELLFNVLRG----YDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKA 229
L+ + ++ VL G +D +TS + +R R H +++ D+
Sbjct: 802 LAKLSVMIEKVLSGQLKPLNDLATRRTSHA-----SRTRVFHVPPRVLIDN--------- 847
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
N +TVI + +DRP LL+D+ L+++ + ++T
Sbjct: 848 ----------------NASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGE 891
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+A FY++ V GL ++ E + ++ + L +A+
Sbjct: 892 KAIDVFYVKDVFGLKVTHEGKLAKIKERLLSAL 924
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR GLL D+TR +L I A+IST G K D FYV DV G
Sbjct: 856 IEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKDVFG 904
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L++L + +A+I T ++A V +V D G +
Sbjct: 853 HTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKD-VFGLKVTHEG 911
Query: 176 RLSTIKELLFNVL 188
+L+ IKE L + L
Sbjct: 912 KLAKIKERLLSAL 924
>gi|414875535|tpg|DAA52666.1| TPA: hypothetical protein ZEAMMB73_008664 [Zea mays]
Length = 270
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P E+ H +
Sbjct: 126 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 238
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ + L N LR Y R+ +T
Sbjct: 239 -YRGGKLNSSLSQALTNCLRYY--LRRPET 265
>gi|392380967|ref|YP_005030163.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
gi|356875931|emb|CCC96679.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
Length = 935
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L ++ L I A IS+ G +DVF V
Sbjct: 846 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 905
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 906 KDVFGLKVTHESKLAQIRERL 926
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPK 175
T + TD GLFS + LA ++V+A I+T N A V V D + G A +
Sbjct: 747 TEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAFESGD 806
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
+L+ + ++ VL G L P LH + +R R
Sbjct: 807 KLAKLSVMIEKVLSG---------QLKP---------LHDLT------KRKAPHASRTRV 842
Query: 236 KSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P+V + N +TVI + +DRP LL+D+ LT++ + ++T +A
Sbjct: 843 FHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDV 902
Query: 295 FYIRHVDGLPISSEAE----RERVIQCL 318
FY++ V GL ++ E++ RER++ L
Sbjct: 903 FYVKDVFGLKVTHESKLAQIRERLLHAL 930
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L +L + +A+I T+ ++A V +V D G +
Sbjct: 859 HTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKD-VFGLKVTHES 917
Query: 176 RLSTIKELLFNVL 188
+L+ I+E L + L
Sbjct: 918 KLAQIRERLLHAL 930
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR GLL D+TR +L I A+IST G K D FYV DV G
Sbjct: 862 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFG 910
>gi|67633328|gb|AAY78579.1| uridylyltransferase [uncultured bacterium MedeBAC82F10]
Length = 851
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR+ IDN AT ++ S ++ G+L+ ++Q+ +D N+ ++ A IS+ G D+F +
Sbjct: 767 PRITIDNQMSKLATTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KK++D + + ++ +L
Sbjct: 827 DLKNKKVKDTKTLKTLEDQL 846
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG-MVNTGRTEAYQEFYIRHVDGLPISSE 308
+Y + + +R +L DIV Q + +++ + F++ I +
Sbjct: 672 EYGAVIVICPNRSGVLKDIVAGFHSSQINILGSRIISLNNNDIIDVFWVTSSIQKAIIEK 731
Query: 309 AERERVIQCLEAAIERRASEGLE---------------------------LELCTEDRVG 341
E+ERVIQ + A++ + E + ++ + DR G
Sbjct: 732 NEQERVIQNITASLNQEELETYQTLFQTKIKVEVEPRITIDNQMSKLATTFQILSGDRQG 791
Query: 342 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 395
LL DI +IF + ++S++ A+IST G KV D F +TD+ V D K + ++ Q+
Sbjct: 792 LLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITDLKNKKVKDTKTLKTLEDQL 846
>gi|404496286|ref|YP_006720392.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|418064989|ref|ZP_12702365.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
gi|78193893|gb|ABB31660.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|373563262|gb|EHP89463.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
Length = 899
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T ++ A + + G+ I D R + E
Sbjct: 723 DVPGLFSMITGVMAANGINILGAQIHTSSNGKALDILQVNSPQGFIITDVGRWKRVNE-- 780
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
D R+ T +P + +R+ ++ EKA R S+R ++
Sbjct: 781 --------DLRQVLTGKTPVASLVAKRQRPTLL--------AEKAKPRF---SARVEIDN 821
Query: 245 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
+ DYTVI + + D+ +L+ I TLT++ + ++T + FY++ + G
Sbjct: 822 -EVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVKDIFGHK 880
Query: 305 ISS----EAERERVIQCLE 319
I++ E RER+++ +E
Sbjct: 881 ITNPERLEEIRERLLKAVE 899
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
RV IDN +D TVI + + +K GIL Q+ L ++ L I + IS+ DVF V
Sbjct: 815 ARVEIDNEVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVK 874
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + E ++ I++RL
Sbjct: 875 DIFGHKITNPERLEEIRERL 894
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ T D+VG+L IT E L I ++IST +V D FYV D+ G+ + +P+ ++
Sbjct: 830 IDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVKDIFGHKITNPERLEE 889
Query: 391 IRRQI 395
IR ++
Sbjct: 890 IRERL 894
>gi|30173092|sp|Q8RQD1.1|GLND_AZOBR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|19421768|gb|AAL87737.1|AF149716_1 uridylyltransferase [Azospirillum brasilense]
Length = 933
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L ++ L I A IS+ G +DVF V
Sbjct: 844 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 904 KDVFGLKVTHENKLAQIRERL 924
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPK 175
T + TD GLFS + LA ++V+A I+T N A V V D + G A +
Sbjct: 745 TEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAFESGD 804
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
+L+ + ++ VL G L P LH + +R R
Sbjct: 805 KLAKLSVMIEKVLSG---------QLKP---------LHDLT------KRKAPHASRTRV 840
Query: 236 KSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P+V + N +TVI + +DRP LL+D+ LT++ + ++T +A
Sbjct: 841 FHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDV 900
Query: 295 FYIRHVDGLPISSEAE----RERVIQCL 318
FY++ V GL ++ E + RER++ L
Sbjct: 901 FYVKDVFGLKVTHENKLAQIRERLLHAL 928
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L +L + +A+I T+ ++A V +V D G +
Sbjct: 857 HTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKD-VFGLKVTHEN 915
Query: 176 RLSTIKELLFNVL 188
+L+ I+E L + L
Sbjct: 916 KLAQIRERLLHAL 928
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR GLL D+TR +L I A+IST G K D FYV DV G
Sbjct: 860 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFG 908
>gi|422651057|ref|ZP_16713856.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964139|gb|EGH64399.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 898
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSL 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQEAI 880
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSLLQEAIVKQL 884
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 37/218 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
F+I + P+S ++ L+ AI ++ S
Sbjct: 852 RVEDVFFITDANNQPLSD----PQLCSLLQEAIVKQLS 885
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + + D ++ +Q+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSLLQE 878
>gi|422628315|ref|ZP_16693524.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330936832|gb|EGH40981.1| PII uridylyl-transferase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 623
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 541 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 600
Query: 391 IRRQI 395
++ +I
Sbjct: 601 LQDEI 605
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 505 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 564
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I Q+L ++ LR S+
Sbjct: 565 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDEIVQQLSVNSEQGGDLRISI 623
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 426 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 485
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 486 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 524
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 525 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 576
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 577 RVEDVFFITDANNHPLS 593
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 413 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 472
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 473 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 529
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 530 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 588
Query: 168 GYAIKDPK 175
+ + DP+
Sbjct: 589 NHPLSDPQ 596
>gi|422587022|ref|ZP_16661693.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330872741|gb|EGH06890.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 898
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSL 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQEAI 880
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 37/218 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 327
F+I + P+S ++ L+ AI ++ S
Sbjct: 852 RVEDVFFITDANNQPLSD----PQLCSLLQEAIVKQLS 885
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSLLQEAIVKQL 884
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + + D ++ +Q+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSLLQE 878
>gi|398846487|ref|ZP_10603457.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
gi|398252519|gb|EJN37706.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
Length = 900
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQIGHTKLQVKRSTILAP 410
++ I +LQ +++ +P
Sbjct: 877 LQEAIVQ-QLQAGQASESSP 895
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASF-------APSLRSSVGVMPT----- 113
+ V+D DG I D K++ D + + L + P P
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 114 ---EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 40/223 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFNFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRASE 328
F+I D P+S +E ++Q L+A +ASE
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG---QASE 892
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|349699981|ref|ZP_08901610.1| PII uridylyl-transferase [Gluconacetobacter europaeus LMG 18494]
Length = 969
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L V L++ L I A+I++ G
Sbjct: 858 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 917
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+DVF V D G KI DK +D I+ L
Sbjct: 918 RAVDVFYVKDLFGLKITDKGRLDRIRTTL 946
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 31/226 (13%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 761 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 820
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
++P++L+ + L+ L G + + ++ G RR+ I
Sbjct: 821 FEEPQQLARLSLLVEQALTGRININR---EIAQCGRRLSGRRMRAIHVP----------- 866
Query: 231 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N + TV+ + +DRP LL D+ L++ + + + T
Sbjct: 867 ---------PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 917
Query: 290 EAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASE 328
A FY++ + GL I+ + +R+ +Q EAA +R++SE
Sbjct: 918 RAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRQSSE 963
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 322 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ RAS + E+ DR GLL D+T E L I A I+T G + D FYV D+ G
Sbjct: 871 IDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 930
Query: 381 NPV-DPKIIDSIR 392
+ D +D IR
Sbjct: 931 LKITDKGRLDRIR 943
>gi|237800142|ref|ZP_04588603.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022999|gb|EGI03056.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 898
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSR 875
Query: 391 IRRQI 395
++ I
Sbjct: 876 LQEAI 880
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGL-TEALHNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 864 NQPLSDPQLCSRLQEAIVKQL 884
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + + D ++ +Q+ +L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSRLQEAIVKQLSVNSDTGGDLRISI 898
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L L DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALHNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNQPLS 868
>gi|224110178|ref|XP_002315438.1| predicted protein [Populus trichocarpa]
gi|222864478|gb|EEF01609.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ +DAT++++ ++ G L+ + L + L + K + +DG F +
Sbjct: 11 PVVLIDQDSDSDATIVQLSFGDRLGALIDTMNALKHLGLDVAKGTVLTDGPVKQTKFFIT 70
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
D G+K+ D ++++ I+ + ++S ++ + G+ E+ ++ T
Sbjct: 71 RLDTGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVDITTHVH 130
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ ++AD++ +V +AEI T A HV+ G
Sbjct: 131 VKEDGPKRSLLCIETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHVS--YRG 188
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ ++L N LR Y R+ +T +
Sbjct: 189 AALT-----SSLSQVLVNCLRYY--LRRPETDI 214
>gi|325278101|ref|ZP_08143616.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
gi|324096767|gb|EGB95098.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
Length = 900
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQIGHTKLQVKRSTILAP 410
++ I +LQ + + +P
Sbjct: 877 LQEAIVQ-QLQAGQGSDTSP 895
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D +++ D + + L ++ ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVRQIRDGLSEALRNPENYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|422616472|ref|ZP_16685178.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330896056|gb|EGH28277.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
Length = 728
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 646 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 705
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 706 LQDAIVKQL 714
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 531 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 590
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 591 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 629
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 630 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 681
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 682 RVEDVFFITDANNHPLS 698
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 518 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 577
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 578 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 634
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 635 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 693
Query: 168 GYAIKDPK-----RLSTIKELLFNVLRGYD 192
+ + DP+ + + +K+L N +G D
Sbjct: 694 NHPLSDPQLCRQLQDAIVKQLSVNSEQGGD 723
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 610 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 669
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 670 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEQGGDLRISI 728
>gi|254454604|ref|ZP_05068041.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
gi|198269010|gb|EDY93280.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
Length = 932
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 27/207 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + F D PG+FS +C L+ + NVV+A +T D A S G ++ R
Sbjct: 743 TRVCFAMADHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQDSDGTPFEE-TR 801
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L +++++ L G I+ RE F DRD + + RV
Sbjct: 802 LPRLRKMIERTLHG--------------DIVPRE------AFADRDKIKKRERAFRVS-- 839
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+T N + YT+I + ++DRP LL D+ TL + + ++ T + F
Sbjct: 840 ---TSITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTF 896
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAI 322
Y++++ GL + + + + + L AI
Sbjct: 897 YVKNMFGLKYHEQEKCDALERKLHEAI 923
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRAS-----EGLEL----ELCTEDRVGLLSDITRI 349
H D +P + A+R++ I+ E A S EG E+ E+ T DR GLL D+TR
Sbjct: 814 HGDIVPREAFADRDK-IKKRERAFRVSTSITFDNEGSEIYTIIEVDTRDRPGLLHDLTRT 872
Query: 350 FRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
++ I A I+T G +V DTFYV ++ G
Sbjct: 873 LANANVYIASAVIATYGEQVVDTFYVKNMFG 903
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
+ DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V +
Sbjct: 842 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNM 901
Query: 77 DGKKIRDKEVIDYIQQRL 94
G K ++E D ++++L
Sbjct: 902 FGLKYHEQEKCDALERKL 919
>gi|167032157|ref|YP_001667388.1| PII uridylyl-transferase [Pseudomonas putida GB-1]
gi|189041208|sp|B0KS97.1|GLND_PSEPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166858645|gb|ABY97052.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida GB-1]
Length = 900
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQIGHTKLQVKRSTILAP 410
++ I +LQ + + +P
Sbjct: 877 LQEAIVQ-QLQAGQGSDTSP 895
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 321
F+I D P+S +E ++Q L+A
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 888
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|356558203|ref|XP_003547397.1| PREDICTED: uncharacterized protein LOC100793459 [Glycine max]
Length = 424
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 130/305 (42%), Gaps = 41/305 (13%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N D +I V+ +K G+ + +++ D L I K +S+DG W V VI +
Sbjct: 19 NKPGDPFIITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIP---YSV 75
Query: 82 RDKEVIDY--IQQRLETDASFAPSLRSSVGVMPTEEHTS----IEFTGTDRPGLFSEVCA 135
Y +++RL+ P +S V+ +S ++F DR GL +V
Sbjct: 76 LLPMSCSYLILKERLQ---KICPPCLASFYVIQQPSRSSPVYLLKFCCLDRKGLLHDVTK 132
Query: 136 VLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
VL++L + ++ T D R + VTD+ ++ R E L VLR D
Sbjct: 133 VLSELELTIQKVKVTTTPDGRVLDLFFVTDNKELLHTRN--RQDETCERLNAVLR--DSC 188
Query: 195 RKAKTSLSPP------GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL--- 245
+ L+ P GI + L + +F R E + V ++ P +T L
Sbjct: 189 ISCELQLAGPEYEYNQGISSLSPALAEELF------RCELSDNEVRAQALSPDMTKLKKT 242
Query: 246 NIEKD------YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF--YI 297
N+ D +T++ +R D LL+DI+ TL D+ + +G + + Y++ +I
Sbjct: 243 NVTMDNSLSPAHTLVQIRCADHKGLLYDIMRTLKDLNMKISYGRFSPN-SMGYRDLDIFI 301
Query: 298 RHVDG 302
+ DG
Sbjct: 302 QQKDG 306
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 246 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY-IRHVDGLP 304
N D +IT+ D+ L DI + D + G V+T Y + I + LP
Sbjct: 19 NKPGDPFIITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIPYSVLLP 78
Query: 305 ISSE----AERERVI--QCLEA--AIER--RASEGLELELCTEDRVGLLSDITRIFRENS 354
+S ER + I CL + I++ R+S L+ C DR GLL D+T++ E
Sbjct: 79 MSCSYLILKERLQKICPPCLASFYVIQQPSRSSPVYLLKFCCLDRKGLLHDVTKVLSELE 138
Query: 355 LSIKRAEISTI-GGKVKDTFYVTD 377
L+I++ +++T G+V D F+VTD
Sbjct: 139 LTIQKVKVTTTPDGRVLDLFFVTD 162
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF--MDVFNVI 74
V +DN+ T++++ + G+L +++ L D+N+ I S + + +D+F +
Sbjct: 244 VTMDNSLSPAHTLVQIRCADHKGLLYDIMRTLKDLNMKISYGRFSPNSMGYRDLDIF-IQ 302
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D E + RL+ + P P E +E +G RP +F
Sbjct: 303 QKDGKKILDPEKQSALCSRLKQEM-LHPLRVIIANRGPDTELLVANPVELSGMGRPRVFY 361
Query: 132 EVCAVLADLHCNVVNAEIWTHN 153
+V L + V +AE+ H+
Sbjct: 362 DVTFALKTVGICVFSAEVGRHS 383
>gi|384260480|ref|YP_005415666.1| [protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
gi|378401580|emb|CCG06696.1| [Protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
Length = 917
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN TVI+V+ ++ G L V Q L V + I A IS+ G +DVF V
Sbjct: 825 PPRVLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G K+ K + I++ LE
Sbjct: 885 KDVFGMKVVHKTKLAQIREALEA 907
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS++ +A +++A I T D A G I +P+R+ + +
Sbjct: 735 DHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQTLDGRPIAEPERIERLARTV 794
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
VL G +A +P RL + R + P+V +
Sbjct: 795 RGVLTGTIALARALQEQAP--------RLPE----------------RAHALTVPPRVLI 830
Query: 245 LN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
N K +TVI + +DRP L + LT + + ++T FY++ V G+
Sbjct: 831 DNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKDVFGM 890
Query: 304 PISSEAERERVIQCLEAAI 322
+ + + ++ + LEAAI
Sbjct: 891 KVVHKTKLAQIREALEAAI 909
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNVID 75
V+ D++ +I D + G+ ++ + + I A I++ G +D F +
Sbjct: 718 VIPDSHRSVSDVIIYTD--DHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQT 775
Query: 76 CDGKKIRDKEVID--------------YIQQRLETDASFAPSLRSSVGVMP--------T 113
DG+ I + E I+ + + L+ A P ++ V P +
Sbjct: 776 LDGRPIAEPERIERLARTVRGVLTGTIALARALQEQAPRLPERAHALTVPPRVLIDNQAS 835
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ HT IE G DRPG V L + + +A I T+ +R V +V D G +
Sbjct: 836 KTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKD-VFGMKVVH 894
Query: 174 PKRLSTIKELL 184
+L+ I+E L
Sbjct: 895 KTKLAQIREAL 905
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR G L +T+ + I A IST G +V D FYV DV G V
Sbjct: 841 IEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKDVFGMKV 892
>gi|406707469|ref|YP_006757821.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
gi|406653245|gb|AFS48644.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
Length = 851
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR+ IDN T ++ S ++ G+L+ ++Q+ +D N+ ++ A IS+ G D+F +
Sbjct: 767 PRITIDNQMSKLVTTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KKI+D +++ ++ +L
Sbjct: 827 DLKNKKIKDTKILKTLEDQL 846
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 29/176 (16%)
Query: 249 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG-MVNTGRTEAYQEFYIRHVDGLPISS 307
K+Y + + +R +L DIV Q + +++ + F++ I
Sbjct: 671 KEYGAVIVICPNRSGVLKDIVAGFNSSQINILGSRIISLNNNDIIDVFWVTSSIQKAIVE 730
Query: 308 EAERERVIQCLEAAIERRASEGLE---------------------------LELCTEDRV 340
+ E+ERVIQ + +++ + E + ++ + DR
Sbjct: 731 KNEQERVIQNITSSLNQEELETYQPLFQTKIKVEVEPRITIDNQMSKLVTTFQILSGDRQ 790
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 395
GLL DI +IF + ++S++ A+IST G KV D F +TD+ + D KI+ ++ Q+
Sbjct: 791 GLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITDLKNKKIKDTKILKTLEDQL 846
>gi|423097068|ref|ZP_17084864.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
gi|397889129|gb|EJL05612.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
Length = 777
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 694 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 753
Query: 391 IRRQI 395
++ I
Sbjct: 754 LQEAI 758
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 566 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 625
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASF-------APSLRSSVGVMP------ 112
+ V+D DG I D K++ D + + L A + P P
Sbjct: 626 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPLVTIHN 685
Query: 113 --TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 686 DAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQP 744
Query: 171 IKDPKRLSTIKE 182
+ DP+ S ++E
Sbjct: 745 LSDPQLCSRLQE 756
>gi|343509231|ref|ZP_08746516.1| PII uridylyl-transferase [Vibrio scophthalmi LMG 19158]
gi|342805298|gb|EGU40574.1| PII uridylyl-transferase [Vibrio scophthalmi LMG 19158]
Length = 874
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+ L+R +P P V+I T + V ++H + V+ L+ N + A + +S
Sbjct: 668 SHLLRHDDPSKPLVLISEKATRGGTEVFVYHKDQHALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETD------ASFAP------SLRSS 107
G+ +D F V+D G I R K VI ++ L+ P +++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFKVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +P++ + T++EF D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLNINLHAAKITTIGERAEDLFIITGT 847
Query: 166 STGYAIKDPKRL 177
G + K L
Sbjct: 848 EGGKLSEQEKSL 859
>gi|372280408|ref|ZP_09516444.1| PII uridylyl-transferase [Oceanicola sp. S124]
Length = 921
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 50/251 (19%)
Query: 96 TDASFAPSLRSSVGVMPTEE------------HTSIEFTGTDRPGLFSEVCAVLADLHCN 143
T A+FA LR G +P +E T F D PG+F+ + LA + N
Sbjct: 702 TQAAFAGMLR---GGLPVDEIRIDLKADDDHDATRALFAMADHPGIFARLSGALALVGAN 758
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSP 203
VV+A +T D A + G A + RL + +++ +LRG R+A
Sbjct: 759 VVDARTYTTVDGYATAAFWVQDAEG-APYEASRLPRLTQMIHKILRGEVVTREAMQDRDR 817
Query: 204 PGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKD 260
I RER + FD+ E YT+I + ++D
Sbjct: 818 --IKKRERAFKVSTSVAFDNEGSE-------------------------IYTIIEVDTRD 850
Query: 261 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320
RP LL D+ TL + ++ T + FY++ + GL + S++++ + LEA
Sbjct: 851 RPGLLHDLTRTLAASNVQISSAVIATYGEQVVDTFYVKDMFGLKLFSDSKQ----KALEA 906
Query: 321 AIERRASEGLE 331
+ + G E
Sbjct: 907 KLREAIAAGQE 917
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLHDLTRTLAASNVQISSAVIATYGEQVVDTFYVKDMFG 892
>gi|424066534|ref|ZP_17803998.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440720411|ref|ZP_20900829.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440726539|ref|ZP_20906792.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443645006|ref|ZP_21128856.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
gi|408002133|gb|EKG42396.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440365936|gb|ELQ03023.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440366121|gb|ELQ03206.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443285023|gb|ELS44028.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
Length = 898
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPK-----RLSTIKELLFNVLRGYD 192
+ + DP+ + + +K+L N +G D
Sbjct: 864 NHPLSDPQLCRQLQDAIVKQLSVNSEQGGD 893
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEQGGDLRISI 898
>gi|359394094|ref|ZP_09187147.1| uridylyltransferase [Halomonas boliviensis LC1]
gi|357971341|gb|EHJ93786.1| uridylyltransferase [Halomonas boliviensis LC1]
Length = 891
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 384
A+E LEL DR GLL+ + RIF E +S+ A+I+T+G +V+D F++T G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 385 PKIIDSIRRQI 395
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD I+ ++Q L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNDWTLNTFIVLDSHGQPIRDPGHIEEMRQHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + ++
Sbjct: 789 DIVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITT-KAGEPLTDPERQQQLRERLIEVL 889
>gi|424071187|ref|ZP_17808613.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999261|gb|EKG39647.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 898
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 851
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPK-----RLSTIKELLFNVLRGYD 192
+ + DP+ + + +K+L N +G D
Sbjct: 864 NHPLSDPQLCRQLQDAIVKQLSVNSEQGGD 893
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEQGGDLRISI 898
>gi|352106684|ref|ZP_08961627.1| PII uridylyl-transferase [Halomonas sp. HAL1]
gi|350597727|gb|EHA13855.1| PII uridylyl-transferase [Halomonas sp. HAL1]
Length = 891
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 384
A+E LEL DR GLL+ + RIF E +S+ A+I+T+G +V+D F++T G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 385 PKIIDSIRRQI 395
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD I+ ++Q L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNDWTLNTFIVLDSHGQPIRDPNHIEEMRQHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + ++
Sbjct: 789 TIVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITT-KAGEPLTDPERQQQLRERLIEVL 889
>gi|448748399|ref|ZP_21730033.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
gi|445564020|gb|ELY20152.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
Length = 891
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 384
A+E LEL DR GLL+ + RIF E +S+ A+I+T+G +V+D F++T G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 385 PKIIDSIRRQI 395
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD I+ +++ L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNDWTLNTFIVLDNHGQPIRDPGHIEEMRRHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + ++
Sbjct: 789 DIVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITT-KAGEPLTDPERQQQLRERLIEVL 889
>gi|359787446|ref|ZP_09290493.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
gi|359295263|gb|EHK59538.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
Length = 891
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 384
A+E LEL DR GLL+ + RIF E +++ A+I+T+G +V+D F++T+ G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITNKAGEPLTD 874
Query: 385 PKIIDSIRRQI 395
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD E I+ ++Q L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNNWTLNTFIVLDNVGQPIRDLERIEEMRQHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + +
Sbjct: 789 DIVSRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T+ G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITN-KAGEPLTDPERQQQLRERLIEVL 889
>gi|323497974|ref|ZP_08102983.1| PII uridylyl-transferase [Vibrio sinaloensis DSM 21326]
gi|323317019|gb|EGA70021.1| PII uridylyl-transferase [Vibrio sinaloensis DSM 21326]
Length = 873
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFASVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G+ I R K VI ++ LE P ++++ + +PT+ +
Sbjct: 739 LDQHGEVIDESRHKAVIKHLAHVLEDGRPTKIKTRRVPRNLQHFTVKTKIDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADL ++ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLATVGATFADLGIHLHAAKITTIGERAEDLFIITSENGG 850
>gi|387770803|ref|ZP_10126978.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
gi|386903553|gb|EIJ68363.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
Length = 858
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 28/155 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 310
T I + KD+P L + + C +++ + + + T A+ F + +DG ++ +
Sbjct: 682 TGIFIYCKDQPSLFYKVACVISNKKLSIHDAQIMTSLDGYAFDTFIVTEIDGSLLNFDRR 741
Query: 311 RE----------------------RVIQCLEAAIERRASEGL-----ELELCTEDRVGLL 343
R+ +Q E R + E+EL D+ GLL
Sbjct: 742 RKLEKSIVEVLKSNDLPKLQGINNHRLQHFYVTTEVRFLNTIKNTHTEMELYALDKTGLL 801
Query: 344 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 378
+D++RIF E++L+I+ A+I+T+G KV+D F +T+
Sbjct: 802 ADVSRIFSEHNLNIQNAKITTVGEKVEDFFILTNA 836
>gi|339053462|ref|ZP_08648168.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC2047]
gi|330721330|gb|EGG99408.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC2047]
Length = 349
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ T DR GLL+ I RIF EN L +++A+I+T+G +V+D F++T P+ D K+ D+
Sbjct: 263 VEVVTPDRPGLLARIGRIFLENELELQKAKIATLGERVEDVFFITGKDLKPLGDSKLHDA 322
Query: 391 IRRQIGHTKLQVKRSTILAP 410
++ +I Q+ S AP
Sbjct: 323 LKVEIC---TQLDESAQFAP 339
>gi|422664985|ref|ZP_16724858.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330975404|gb|EGH75470.1| PII uridylyl-transferase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 380
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 298 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 357
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 358 LQDAIVKQL 366
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 183 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 242
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 243 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 281
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 282 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 333
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 334 RVEDVFFITDANNHPLS 350
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 170 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 229
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 230 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 286
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 287 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 345
Query: 168 GYAIKDPK-----RLSTIKELLFNVLRGYD 192
+ + DP+ + + +K+L N +G D
Sbjct: 346 NHPLSDPQLCRQLQDAIVKQLSVNSEQGGD 375
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 262 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 321
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 322 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEQGGDLRISI 380
>gi|357386406|ref|YP_004901130.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
gi|351595043|gb|AEQ53380.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
Length = 929
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAY 59
+D Y + ++ + P + +N +D TVI++ +++ G+L + + L+D+NL I A+
Sbjct: 821 VDSRYNRRLKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAH 880
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR 105
I + G +DVF V D G KI K I + LE A FAP+ R
Sbjct: 881 IGTYGEKAVDVFYVTDLTGGKITSKVRQKRIHEALE--AVFAPARR 924
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DR GLL +TR + +L+I A I T G K D FYVTD+TG KI +
Sbjct: 851 IEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDLTGG----KITSKV 906
Query: 392 RRQIGHTKLQVKRSTILAP 410
R++ H L+ + AP
Sbjct: 907 RQKRIHEALEA----VFAP 921
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 22/156 (14%)
Query: 54 VIKKAYISSDGGWFMDVFNV----IDCDGKKIRDKEVIDYIQQRLETDASFAPSL----- 104
+I ++ G+ +D F + + +KIR + D ++ LE L
Sbjct: 765 IIGAQIFNTKDGYALDTFRLRRAFTSDEDEKIRASRITDMVKALLEGRKYLPADLGVDSR 824
Query: 105 ---RSSVGVMPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152
R +PTE + T IE +G DR GL + L+DL+ + +A I T+
Sbjct: 825 YNRRLKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTY 884
Query: 153 NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
++A V +VTD TG I R I E L V
Sbjct: 885 GEKAVDVFYVTD-LTGGKITSKVRQKRIHEALEAVF 919
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 87/224 (38%), Gaps = 36/224 (16%)
Query: 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
S S + E T + F D P L S + +++ A+I+ D
Sbjct: 724 SFAGSTSIKAFEGITEVTFYTPDHPRLLSLIAGACTTADASIIGAQIFNTKD-------- 775
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGY-----DDFRKAKTSLSPPGIMNRERRLHQIM 217
GYA+ F + R + + R ++ + ++ + L +
Sbjct: 776 -----GYALDT-----------FRLRRAFTSDEDEKIRASRITDMVKALLEGRKYLPADL 819
Query: 218 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 276
D Y R R++ S ++ + N D +TVI + DR LL+ + L+D+
Sbjct: 820 GVDSRYNR------RLKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLN 873
Query: 277 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320
+ + T +A FY+ + G I+S+ ++R+ + LEA
Sbjct: 874 LTIGSAHIGTYGEKAVDVFYVTDLTGGKITSKVRQKRIHEALEA 917
>gi|374292182|ref|YP_005039217.1| [protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
gi|357424121|emb|CBS86988.1| [Protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
Length = 954
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L+++ L I A +S+ G +DVF V
Sbjct: 841 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYV 900
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 901 KDVFGLKVTHEGKLAKIKERL 921
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPK 175
T + TD GLFS + LA ++V+A I+T N A V V D + G A +
Sbjct: 742 TEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDAAGGGAFESGD 801
Query: 176 RLSTIKELLFNVLRG----YDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEK 228
+L+ + ++ VL G +D +T+ + +R R H +++ D+
Sbjct: 802 KLAKLSVMIEKVLSGQLKPLNDLSTRRTTQA-----SRTRVFHVPPRVLIDN-------- 848
Query: 229 AVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
N +TVI + +DRP LL+D+ L+++ + V+T
Sbjct: 849 -----------------NASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFG 891
Query: 289 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+A FY++ V GL ++ E + ++ + L +A++
Sbjct: 892 EKAIDVFYVKDVFGLKVTHEGKLAKIKERLLSALD 926
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L++L + +A++ T ++A V +V D G +
Sbjct: 854 HTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVKD-VFGLKVTHEG 912
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
+L+ IKE L + L DD PP + R R
Sbjct: 913 KLAKIKERLLSAL---DD---PSGDAPPPATVKRTR 942
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR GLL D+TR +L I A++ST G K D FYV DV G
Sbjct: 857 IEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVKDVFG 905
>gi|56695312|ref|YP_165660.1| PII uridylyl-transferase [Ruegeria pomeroyi DSS-3]
gi|81170627|sp|Q5LWE5.1|GLND_SILPO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56677049|gb|AAV93715.1| protein-P-II uridylyltransferase [Ruegeria pomeroyi DSS-3]
Length = 908
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 61/260 (23%)
Query: 94 LETDASFAPSLRS----------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLH 141
+ET +FA LR + + P E+ T F D PG+FS + LA +
Sbjct: 683 VETHVTFAEMLRQLEHSGDPGGIEIRLDPDEDRDATRACFAMADHPGIFSRMAGALALVG 742
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK-------RLSTIKELLFNVLRGYDDF 194
NVV+A +T D +VTD + I+D + RL + +++ L+G
Sbjct: 743 ANVVDARSYTTKDG-----YVTD---AFWIQDAEGHPYEAARLPRLSQMILKTLKGEVVA 794
Query: 195 RKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDY 251
R A S I RE+ + I FD+ + Y
Sbjct: 795 RDALKSRDK--IKKREKAFNVPTHITFDNEGSD-------------------------IY 827
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 311
T+I + ++DRP LL+D+ L + + ++ T + FY++ + GL SEA++
Sbjct: 828 TIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKDMFGLKYHSEAKQ 887
Query: 312 ERVIQCLEAAIERRASEGLE 331
+ LE + + +EG E
Sbjct: 888 ----RTLETKLRKAITEGAE 903
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V D+FYV D+ G
Sbjct: 830 IEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKDMFG 878
>gi|356536361|ref|XP_003536707.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 283
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ++AT++++ ++ G LL ++ L D+ L + K +S++G F +
Sbjct: 77 PIVLIDQESDSEATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 136
Query: 75 DCD-GKKIRDKEVIDYIQ---------------QRLETDASF---APS------LRSSVG 109
D G+K+ D ++++ I+ + L F AP +++ +
Sbjct: 137 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 196
Query: 110 VMPTEEHTSIEFTGT-DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V S+ + T DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 197 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVS--YGG 254
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
A+ S++ ++L N LR Y
Sbjct: 255 AALN-----SSMAQVLVNCLRYY 272
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 24/205 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E T ++ + DR G + L DL +V + T +T TG ++DP
Sbjct: 88 EATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFITQSDTGRKVEDP 147
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L I+ + N L Y ++ GI +++L D D + R+
Sbjct: 148 DMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKL------DDDIKT------RI 195
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+ K P+ ++L IE + DRP LL +I+ + D+ V ++T A
Sbjct: 196 QVKEDGPKRSLLYIE---------TADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKD 246
Query: 294 EFYIRHVDGLPISSEAERERVIQCL 318
F++ + SS A + ++ CL
Sbjct: 247 TFHVSYGGAALNSSMA--QVLVNCL 269
>gi|330807779|ref|YP_004352241.1| phosphohydrolase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695565|ref|ZP_17670055.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
gi|327375887|gb|AEA67237.1| putative Phosphohydrolase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388009553|gb|EIK70804.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQEAI 881
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 866 QPLSDPQLCSRLQEAIVQHL 885
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 782 DYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLS 841
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + D ++ +Q+
Sbjct: 842 LQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQE 879
>gi|114764208|ref|ZP_01443446.1| PII uridylyl-transferase [Pelagibaca bermudensis HTCC2601]
gi|114543360|gb|EAU46376.1| PII uridylyl-transferase [Roseovarius sp. HTCC2601]
Length = 915
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 43/271 (15%)
Query: 72 NVIDCDGKKIRDKEVIDY--IQQRLETDAS--FAPSLRS------SVGVMPTEEH--TSI 119
+ D D K +R + Y Q L A FA LR + + P E+ T +
Sbjct: 668 ELADWDAKDLRAETARHYDPYWQGLHVTAHKVFAELLRDIGDTEIRIDIHPDEDRDATRV 727
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
F D PG+F+ + L+ + NVV+A +T D A S G ++ R+
Sbjct: 728 CFALADHPGIFARLAGALSLVGANVVDARTFTSKDGYATAAFWIQDSEGSPYEE-SRIPR 786
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDK 236
+++ + L G + + + LS + RE+ + I FD+ E
Sbjct: 787 LRDTIRKTLMG--EVKPREAILSRGKLKKREKAFNVPTSIAFDNEGSE------------ 832
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
YT+I + ++DRP LL+D+ TL++ + ++ T + FY
Sbjct: 833 -------------IYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFY 879
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIERRAS 327
++ + GL + ++++ + + L AA+E A+
Sbjct: 880 VKDMFGLKFYTPSKQKTLERRLRAAMEDGAA 910
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R E+++ I A I+T G +V DTFYV D+ G
Sbjct: 837 IEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYVKDMFG 885
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L++ N+ I A I++ G +D F V
Sbjct: 821 PTSIAFDNEGSEIYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYV 880
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K +++RL
Sbjct: 881 KDMFGLKFYTPSKQKTLERRL 901
>gi|21592963|gb|AAM64912.1| unknown [Arabidopsis thaliana]
Length = 301
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + +AT++++ N+ G L+ ++ L D+ L + K +S++G F++
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + + S ++ + G+ E+ H
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ ++ ++L N LR + R+ +T +
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDI 298
>gi|70728556|ref|YP_258305.1| PII uridylyl-transferase [Pseudomonas protegens Pf-5]
gi|81170625|sp|Q4KHH8.1|GLND_PSEF5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68342855|gb|AAY90461.1| protein-P-II uridylyltransferase [Pseudomonas protegens Pf-5]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQDAI 881
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDVFNVIDCDGKKI-RDK 84
T I + + ++H + ++ +NL I A I + F +D + V+D DG+ I +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGESIGNNP 763
Query: 85 EVIDYIQQRLETDA----------------------SFAPSLRSSVGVMPTEEHTSIEFT 122
+ ++ I++ L TDA +FAP + ++ T +E +
Sbjct: 764 QRVEQIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--TIHNDAQRPVTVLELS 820
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
DRPGL + + + + ++ NA+I T +R V +TD + + DP+ S +++
Sbjct: 821 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQPLSDPQLCSRLQD 879
Query: 183 LLFNVL 188
+ L
Sbjct: 880 AIVEQL 885
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQ 878
>gi|378949067|ref|YP_005206555.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
gi|359759081|gb|AEV61160.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQEAI 881
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 29/194 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKE 182
+ DP+ S ++E
Sbjct: 866 QPLSDPQLCSRLQE 879
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 782 DYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLS 841
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + D ++ +Q+
Sbjct: 842 LQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQE 879
>gi|26988321|ref|NP_743746.1| PII uridylyl-transferase [Pseudomonas putida KT2440]
gi|386013537|ref|YP_005931814.1| protein GlnD [Pseudomonas putida BIRD-1]
gi|38257489|sp|Q88MI2.1|GLND_PSEPK RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24983069|gb|AAN67210.1|AE016348_2 protein-pII uridylyltransferase [Pseudomonas putida KT2440]
gi|313500243|gb|ADR61609.1| GlnD [Pseudomonas putida BIRD-1]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQEAI 881
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 321
F+I D P+S +E ++Q L+A
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 888
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|148549394|ref|YP_001269496.1| PII uridylyl-transferase [Pseudomonas putida F1]
gi|397695319|ref|YP_006533200.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|421522651|ref|ZP_15969292.1| PII uridylyl-transferase [Pseudomonas putida LS46]
gi|166990446|sp|A5W852.1|GLND_PSEP1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148513452|gb|ABQ80312.1| metal dependent phosphohydrolase [Pseudomonas putida F1]
gi|397332049|gb|AFO48408.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|402753751|gb|EJX14244.1| PII uridylyl-transferase [Pseudomonas putida LS46]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQEAI 881
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 321
F+I D P+S +E ++Q L+A
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 888
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|429769827|ref|ZP_19301919.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
gi|429186183|gb|EKY27137.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
Length = 896
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P E + DRPGLF+++ A L+ +VV A + T +D A V G Y
Sbjct: 669 PLESTARVAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPY 728
Query: 170 AIKDPKRLS-TIKELLFNVLRGYDDFRKAKTS-LSPPGIMNRERRLHQIMFDDRDYERVE 227
++P+RL+ +K + VL+G A+TS + P + R + +F+ R R++
Sbjct: 729 GGREPRRLALLVKAMERAVLKG------ARTSAMQAPRVSAR-----RAVFEVRPVVRID 777
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
G VI + DRP LL D+ T++ Y V +
Sbjct: 778 ADTG-----------------TSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASF 820
Query: 288 RTEAYQEFYIRHVDGLPISSEAERE 312
A FYI DG S+A+ E
Sbjct: 821 GERAVDGFYITDPDGRKPKSKAKLE 845
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID +T A VI+V ++ G+L + + ++ + A+++S G +D F +
Sbjct: 772 PVVRIDADTGTSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYIT 831
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D DG+K + K ++ ++ L
Sbjct: 832 DPDGRKPKSKAKLEALKADL 851
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 33/161 (20%)
Query: 254 ITMRSKDRPKLLFDIVCTLTDMQY-VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERE 312
+ + ++DRP L D+ TL+ VV + A F I+ G P R
Sbjct: 676 VAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGREPRR 735
Query: 313 R--VIQCLEAAI---------------ERRA---------------SEGLELELCTEDRV 340
+++ +E A+ RRA + + +E+ DR
Sbjct: 736 LALLVKAMERAVLKGARTSAMQAPRVSARRAVFEVRPVVRIDADTGTSAVVIEVSGADRP 795
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
GLL+D+ R + S + A +++ G + D FY+TD G
Sbjct: 796 GLLADLARTISAHGYSTRSAHVASFGERAVDGFYITDPDGR 836
>gi|331124067|ref|ZP_04591947.2| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331026351|gb|EGI06406.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 322
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 240 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSR 299
Query: 391 IRRQI 395
++ I
Sbjct: 300 LQEAI 304
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 86/226 (38%), Gaps = 33/226 (14%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 125 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 184
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L L DD+ P I+ R R+L F
Sbjct: 185 NPERIQDIREGLTEALHNPDDY---------PTIIKRRVPRQLKHFAF------------ 223
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 224 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 275
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELC 335
F+I + P+S R+ + + + + G +L +
Sbjct: 276 RVEDVFFITDANNQPLSDPQLCSRLQEAIVKQLSVNSDTGGDLRIS 321
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 112 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 171
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 172 YIVLDHEGGSIGNNPERIQDIREGL-TEALHNPDDYPTIIKRRVPRQLKHFAFAPQV--T 228
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 229 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 287
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 288 NQPLSDPQLCSRLQEAIVKQL 308
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 204 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 263
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + + D ++ +Q+ +L ++ LR S+
Sbjct: 264 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSRLQEAIVKQLSVNSDTGGDLRISI 322
>gi|254474863|ref|ZP_05088249.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
gi|214029106|gb|EEB69941.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
Length = 942
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D + G+ + RL +
Sbjct: 757 FCMADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDTEGHPY-EADRLPRL 815
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+++ L+G + + S I RER + I FD+ E
Sbjct: 816 SQMIHKTLKG--EVIAGEALKSRDKIKKRERAFNVPTHITFDNDGSE------------- 860
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 861 ------------IYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 908
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEG 329
+ + GL SEA++ + LEA + +EG
Sbjct: 909 KDMFGLKYYSEAKQ----KSLEAKLRSAIAEG 936
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V D FYV D+ G
Sbjct: 865 IEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFG 913
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 849 PTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 908
Query: 74 IDCDGKK 80
D G K
Sbjct: 909 KDMFGLK 915
>gi|395445036|ref|YP_006385289.1| PII uridylyl-transferase [Pseudomonas putida ND6]
gi|388559033|gb|AFK68174.1| PII uridylyl-transferase [Pseudomonas putida ND6]
Length = 897
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 814 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 873
Query: 391 IRRQI 395
++ I
Sbjct: 874 LQEAI 878
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 864
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 865 LSDPQLCSRLQEAIVQQLQA 884
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 699 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 758
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 759 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 798
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 799 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 849
Query: 290 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 321
F+I D P+S +E ++Q L+A
Sbjct: 850 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 885
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 858 TDADNQPLSDPQLCSRLQE 876
>gi|333901617|ref|YP_004475490.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
gi|333116882|gb|AEF23396.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
Length = 897
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+EL DR GLL+ I RIF + LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 VELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPELCAR 876
Query: 391 IRRQIGHTKLQVKRSTILAPKPPK 414
+++ I V + + +P P +
Sbjct: 877 LQQTI------VTQLSASSPSPAQ 894
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ D +L
Sbjct: 781 DEYPSIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS 99
++ A I++ G DVF V D D + + D E+ +QQ + T S
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDADNQPLSDPELCARLQQTIVTQLS 886
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A +A L+ N+ +A I T + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEAEGGSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
PKR+ I++ L + L D++ P I+ R R+L F
Sbjct: 762 NPKRIQQIRQSLIDTLMHPDEY---------PSIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I D V + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F++ D P+S
Sbjct: 853 RVEDVFFVTDADNQPLS 869
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + + +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD---------KEVID----------YIQQRLETDA---SFAPSLRSSV 108
+ V++ +G I D + +ID IQ+R+ +FAP + ++
Sbjct: 749 YIVLEAEGGSIGDNPKRIQQIRQSLIDTLMHPDEYPSIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL +++ + D +V NA+I T +R V VTD +
Sbjct: 807 HNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTD-ADN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ + +++ + L
Sbjct: 866 QPLSDPELCARLQQTIVTQL 885
>gi|388543702|ref|ZP_10146992.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
gi|388278259|gb|EIK97831.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQDAI 881
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D KE+ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGGSIGDNPVRVKEIRDGLAEALRNPDDYPNIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ADN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S +++ + + L
Sbjct: 866 QPLSDPQLCSRLQDAIVDHL 885
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPNIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSRLQ 878
>gi|209965870|ref|YP_002298785.1| PII uridylyl-transferase [Rhodospirillum centenum SW]
gi|209959336|gb|ACI99972.1| protein-P-II uridylyltransferase [Rhodospirillum centenum SW]
Length = 950
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L V + L +NL I A +++ G +DVF V
Sbjct: 848 PPRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVG 109
D G K+ + + I+Q L +TDA A R G
Sbjct: 908 KDVFGLKVTHEAKLTQIRQALLDALADPDTDARTAKPPRRKAG 950
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 32/204 (15%)
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS----T 179
D PGLFS + LA +V+A I+T ++ A V + G + + P +L+
Sbjct: 756 ADHPGLFSRLAGALALAGATIVDARIFTMSNGMALDVFSVHAAHGGSFESPDKLARLAVL 815
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 239
+++ L LR D+ K +++ P +R R V +V
Sbjct: 816 VEKALAGELRMADELAKRRSATLP----SRAR------------------VFKVP----- 848
Query: 240 PQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P+V V N +TV+ + DRP LL+ + LT + + V T A FY++
Sbjct: 849 PRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVK 908
Query: 299 HVDGLPISSEAERERVIQCLEAAI 322
V GL ++ EA+ ++ Q L A+
Sbjct: 909 DVFGLKVTHEAKLTQIRQALLDAL 932
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT +E G DRPGL V L L+ + +A++ T+ + A V +V D G +
Sbjct: 861 HTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKD-VFGLKVTHEA 919
Query: 176 RLSTIKELLFNVLRGYD-DFRKAKTSLSPP 204
+L+ I++ L + L D D R AK PP
Sbjct: 920 KLTQIRQALLDALADPDTDARTAK----PP 945
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR GLL +TR +L I A+++T G D FYV DV G
Sbjct: 864 VEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKDVFG 912
>gi|15238305|ref|NP_196094.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|7413536|emb|CAB86016.1| putative protein [Arabidopsis thaliana]
gi|9758449|dbj|BAB08978.1| unnamed protein product [Arabidopsis thaliana]
gi|18252933|gb|AAL62393.1| putative protein [Arabidopsis thaliana]
gi|21389645|gb|AAM48021.1| putative protein [Arabidopsis thaliana]
gi|332003394|gb|AED90777.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949480|gb|AEP31953.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 301
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + +AT++++ N+ G L+ ++ L D+ L + K +S++G F++
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + + S ++ + G+ E+ H
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ ++ ++L N LR + R+ +T +
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDI 298
>gi|326499446|dbj|BAJ86034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 108 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 167
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFT----- 122
G+K+ D ++++ I+ + ++S ++ G+ E+ +E
Sbjct: 168 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPEKKVDVEVATHVIV 226
Query: 123 -------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
DRPGL EV ++ D++ +V +AEI T A HV+
Sbjct: 227 QDDGPKRSMLYIETADRPGLLLEVIKIITDVNIDVESAEIDTEGLVAKDKFHVS------ 280
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ ++L N LR Y R+ +T
Sbjct: 281 -YRGAKLNSSLSQVLVNCLRYY--LRRPET 307
>gi|13474440|ref|NP_106008.1| PII uridylyl-transferase [Mesorhizobium loti MAFF303099]
gi|22256765|sp|Q98C27.1|GLND_RHILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|14025193|dbj|BAB51794.1| uridylyltransferase [Mesorhizobium loti MAFF303099]
Length = 933
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 395
DR GLLS+IT + SL I A I+T G KV DTFYVTD+TG +D P I +IR ++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRL 913
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPARIA 907
Query: 179 TIKELLFNVLRGYDDFRKAKT 199
TI+ L L G R K
Sbjct: 908 TIRNRLMATLEGIAPERGGKA 928
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI I I+ RL
Sbjct: 893 TDLTGQKIDSPARIATIRNRL 913
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 89/239 (37%), Gaps = 29/239 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DA+ L + V E T I D P L S + N+V+A+I+T D
Sbjct: 715 EADAA-GKKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACVGAGGNIVDAQIFTTAD 773
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + + +R + L+ +VL G S P I R +
Sbjct: 774 GRALDTILISREFDRDEDERRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--- 822
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 274
+ +V K R E +++ + ++VI + DRP LL +I TL+D
Sbjct: 823 -----PKRGAKVFKIPPRAEIRNT--------LSNRFSVIEVEGLDRPGLLSEITGTLSD 869
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASEG 329
+ + + T + FY+ + G I S A R R++ LE R +
Sbjct: 870 LSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRLMATLEGIAPERGGKA 928
>gi|302381407|ref|YP_003817230.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
gi|302192035|gb|ADK99606.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
Length = 890
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ATVI+V ++ G+L ++ + L+D L I+ A+++ G +D F V
Sbjct: 769 PVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVT 828
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAP 102
D G+KI + V+D + LE AP
Sbjct: 829 DARGRKITSEAVLDEVHAALEAVLDRAP 856
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 13/97 (13%)
Query: 322 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ ASEG +E+ DR GLL++++R +++LSI+ A ++ G + D+FYVTD G
Sbjct: 773 IDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVTDARG 832
Query: 381 NPVDPK-IIDSIRRQIGHTKLQVKRSTIL--APKPPK 414
+ + ++D + H L+ +L AP+PP+
Sbjct: 833 RKITSEAVLDEV-----HAALE----AVLDRAPEPPQ 860
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 101 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-V 159
A R G M E T I DRPGLF+++ AVLA +V A + T D V
Sbjct: 657 AAEARQGPGTM--EATTEIALAARDRPGLFADLTAVLAAAGADVAGARVATAADGTVLDV 714
Query: 160 VHVTDHS-TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF 218
V D + Y +P+RL+++ L RG +T ++PP + R + +F
Sbjct: 715 FQVQDGADRPYGQDEPRRLTSLIAALEAAARG-------ETPVAPPAMPAPSPR--RAVF 765
Query: 219 DDRDYERVEKAVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
D RP V + + + TVI + DRP LL ++ TL+D
Sbjct: 766 D------------------VRPVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHAL 807
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
+ V A FY+ G I+SEA + V LEA ++R
Sbjct: 808 SIRSAHVAGFGERAVDSFYVTDARGRKITSEAVLDEVHAALEAVLDR 854
>gi|323495364|ref|ZP_08100442.1| PII uridylyl-transferase [Vibrio brasiliensis LMG 20546]
gi|323310435|gb|EGA63621.1| PII uridylyl-transferase [Vibrio brasiliensis LMG 20546]
Length = 873
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPTE--EH 116
+D G+ I R K VI ++ LE R + V +PT+ +
Sbjct: 739 LDQHGEVIDESRHKAVIKHLAHVLEDGRQTKIKTRRIPRNLQHFKVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADL ++ A+I T +RA + +T + G
Sbjct: 799 TLLEFVALDTPGLLATVGATFADLGVHLHAAKITTIGERAEDLFIITSKNGG 850
>gi|359486976|ref|XP_002268975.2| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
Length = 280
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 98/202 (48%), Gaps = 32/202 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ + AT++++ ++ G L+ ++ L ++L ++K ++++G F +
Sbjct: 75 PMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFIT 134
Query: 75 DCDGKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTSI 119
DG+K+ D ++++ I+ + ++S ++ + G+ E+ H +
Sbjct: 135 RIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIHV 194
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ G DRPGL E+ ++ D++ +V +AEI T A HV+ G
Sbjct: 195 KDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVS--YRGA 252
Query: 170 AIKDPKRLSTIKELLFNVLRGY 191
A+ S++ +++ N LR Y
Sbjct: 253 ALS-----SSLSQVMINSLRYY 269
>gi|433771601|ref|YP_007302068.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
gi|433663616|gb|AGB42692.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
Length = 933
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 395
DR GLLS+IT + SL I A I+T G KV DTFYVTD+TG +D P I +IR ++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRL 913
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I +P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDNPARIA 907
Query: 179 TIKELLFNVLRG 190
TI+ L L G
Sbjct: 908 TIRNRLIATLEG 919
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + I I+ RL
Sbjct: 893 TDLTGQKIDNPARIATIRNRL 913
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 93/235 (39%), Gaps = 30/235 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DA+ L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 EADAA-GNKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSD 773
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + + +R + L+ +VL G S P I R +
Sbjct: 774 GRALDTILISREFDRDEDERRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--- 822
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 274
R +V K R E +++ + ++VI + DRP LL +I TL+D
Sbjct: 823 -----PRRGSKVFKIPPRAEIRNA--------LSNRFSVIEVEGLDRPGLLSEITGTLSD 869
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEA-AIER 324
+ + + T + FY+ + G I + A R R+I LE A+ER
Sbjct: 870 LSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRLIATLEGVALER 924
>gi|343505423|ref|ZP_08742995.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
gi|342807721|gb|EGU42901.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
Length = 874
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+ L+R +P P V+I T + V ++ + V+ L+ N + A + +S
Sbjct: 668 SHLLRHDDPTKPLVLISEKATRGGTEVFVYHKDQRALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETD------ASFAP------SLRSS 107
G+ +D F V+D G I R K VI ++ L+ P +++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFKVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +P++ + T++EF D PGL + V A ADLH N+ A+I T +RA + +T
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLHINLHAAKITTIGERAEDLFIITGA 847
Query: 166 STG 168
G
Sbjct: 848 EGG 850
>gi|388495334|gb|AFK35733.1| unknown [Lotus japonicus]
Length = 282
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ ++AT++++ ++ G L+ ++ L D+ L + K +S++G F +
Sbjct: 76 PMVLIDQDSDSEATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFIT 135
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
+ G+K+ D ++++ I+ + ++S ++ G+ + ++F
Sbjct: 136 QSNTGRKVEDPDMLERIRLTIISNLLKYHPESSEQLAMGEVFGIKAPVKKLDLDFATRIQ 195
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKDKFHVS--YGG 253
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
A+ S++ ++L N LR Y
Sbjct: 254 AALN-----SSMSQVLVNCLRYY 271
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 24/205 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E T ++ + DR G + L DL +V + T +T +TG ++DP
Sbjct: 87 EATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFITQSNTGRKVEDP 146
Query: 175 KRLSTIK-ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L I+ ++ N+L+ + + + GI ++L D D+ R+
Sbjct: 147 DMLERIRLTIISNLLKYHPESSEQLAMGEVFGIKAPVKKL------DLDF------ATRI 194
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+ K P+ ++L IE + DRP LL +I+ + D+ V ++T A
Sbjct: 195 QVKEDGPKRSLLYIE---------TADRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKD 245
Query: 294 EFYIRHVDGLPISSEAERERVIQCL 318
+F++ + G ++S + ++ CL
Sbjct: 246 KFHVSY-GGAALNSSMS-QVLVNCL 268
>gi|163801777|ref|ZP_02195674.1| PII uridylyl-transferase [Vibrio sp. AND4]
gi|159174285|gb|EDP59089.1| PII uridylyl-transferase [Vibrio sp. AND4]
Length = 874
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETD------ASFAPS------LRSSVGVMPTE--EH 116
+D GK I R VI ++ LE+ A P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEESRHSAVIKHMTHVLESGRPKKIRARRTPNKLQHFNVKTRVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|440225345|ref|YP_007332436.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
gi|440036856|gb|AGB69890.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
Length = 971
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ YI RL+
Sbjct: 908 ADLVGQKISNENRRAYITARLKA 930
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYV D+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 915
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I + R
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKISNENR 920
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ I L V+ G +D + + P GI+
Sbjct: 921 RAYITARLKAVMAGEEDEMRERM---PSGII 948
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V + N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 299 HVDGLPISSEAERERVIQCLEAAI 322
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVM 932
>gi|433658394|ref|YP_007275773.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
gi|432509082|gb|AGB10599.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
Length = 874
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSS 107
G +D F V+D G+ I R VI ++ LE P+ +++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 STG 168
+ G
Sbjct: 848 AGG 850
>gi|1184993|gb|AAC32290.1| putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
tropici CIAT 899]
Length = 971
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ YI RL+
Sbjct: 908 ADLVGQKISNENRRAYITARLKA 930
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYV D+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 915
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I + R
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKISNENR 920
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ I L V+ G +D + + P GI+
Sbjct: 921 RAYITARLKAVMAGEEDEMRERM---PSGII 948
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V + N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 299 HVDGLPISSEAERERVIQCLEAAI 322
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVM 932
>gi|374578662|ref|ZP_09651758.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
gi|374426983|gb|EHR06516.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
Length = 929
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 39/209 (18%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 170
T + D P L S + A N+V+A+I+T D RA + ++ D G
Sbjct: 739 TELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG-- 796
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+R + I E++ +VL G L P ++ R
Sbjct: 797 ----RRATRIGEMIEDVLEG---------KLRLPEVVARR-----------------TVR 826
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G+ P+VT+ N D YTVI M DRP LL+++ ++ + + V T
Sbjct: 827 GKARPFVIEPEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGE 886
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCL 318
A FY+ + G IS+ + + L
Sbjct: 887 RARDVFYVTDLLGAQISAPTRQSAIKSAL 915
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 851 IEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQISAPTRQSA 910
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 911 IKSALTH 917
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI++ +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|407777256|ref|ZP_11124526.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
gi|407300956|gb|EKF20078.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
Length = 934
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDSIRRQIG 396
DR GLLS++T + SL I A I+T G KV DTFYVTD+TG V P +++IR+
Sbjct: 853 DRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIVSPDRLETIRK--- 909
Query: 397 HTKLQVKRSTILAPKPPK 414
T LQ S + P K
Sbjct: 910 -TLLQTLESGVERPAKGK 926
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
R +G + + +E G DRPGL SE+ L+DL ++ +A I T ++ +VTD
Sbjct: 833 RVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTD 892
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLR-GYDDFRKAKT 199
TG I P RL TI++ L L G + K KT
Sbjct: 893 -LTGQKIVSPDRLETIRKTLLQTLESGVERPAKGKT 927
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I N +V++V +++ G+L ++ + L+D++L I A+I++ G +D F V
Sbjct: 832 PRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + ++ I++ L
Sbjct: 892 DLTGQKIVSPDRLETIRKTL 911
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L S + + N+V+A+I+T A + + + +R
Sbjct: 734 TEITVFAPDHPRLLSIIAGACSAAGANIVDAQIFTTTHGRALDTILISREFDFDADERRR 793
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I +L+ +VL G S P I R + R + + V RVE
Sbjct: 794 AERIGKLIEDVLSG--------KSYLPEMIEKRAK--------PRRGTKAFRVVPRVEIG 837
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
++ + ++V+ +R DRP LL ++ TL+D+ + + T + FY
Sbjct: 838 NT--------LSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFY 889
Query: 297 IRHVDGLPISS----EAERERVIQCLEAAIERRA 326
+ + G I S E R+ ++Q LE+ +ER A
Sbjct: 890 VTDLTGQKIVSPDRLETIRKTLLQTLESGVERPA 923
>gi|447915634|ref|YP_007396202.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
gi|445199497|gb|AGE24706.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
Length = 897
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 389 --DSIRRQIGHTKLQVKRSTI 407
+I +Q+ T+ V R TI
Sbjct: 877 LQAAIVQQLSVTQEPVTRLTI 897
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIRD + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|28899094|ref|NP_798699.1| PII uridylyl-transferase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361365|ref|ZP_05774430.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
gi|260876824|ref|ZP_05889179.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260895882|ref|ZP_05904378.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|260900384|ref|ZP_05908779.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|32363168|sp|Q87MD6.1|GLND_VIBPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28807318|dbj|BAC60583.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|308089359|gb|EFO39054.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308091507|gb|EFO41202.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308108580|gb|EFO46120.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|308113668|gb|EFO51208.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
Length = 874
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSS 107
G +D F V+D G+ I R VI ++ LE P+ +++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 STG 168
+ G
Sbjct: 848 AGG 850
>gi|417319179|ref|ZP_12105737.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
gi|328474369|gb|EGF45174.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
Length = 874
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSS 107
G +D F V+D G+ I R VI ++ LE P+ +++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 STG 168
+ G
Sbjct: 848 AGG 850
>gi|440737197|ref|ZP_20916770.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
gi|440382379|gb|ELQ18883.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
Length = 897
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 389 --DSIRRQIGHTKLQVKRSTI 407
+I +Q+ T+ V R TI
Sbjct: 877 LQAAIVQQLSVTQEPVTRLTI 897
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIRD + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|7387711|sp|Q53245.2|GLND_RHITR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 948
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 825 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ YI RL+
Sbjct: 885 ADLVGQKISNENRRAYITARLKA 907
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYV D+ G +
Sbjct: 847 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 892
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I + R
Sbjct: 839 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKISNENR 897
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ I L V+ G +D + + P GI+
Sbjct: 898 RAYITARLKAVMAGEEDEMRERM---PSGII 925
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P V + N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Query: 299 HVDGLPISSEAERERVIQCLEAAI 322
+ G IS+E R + L+A +
Sbjct: 886 DLVGQKISNENRRAYITARLKAVM 909
>gi|372268622|ref|ZP_09504670.1| PII uridylyl-transferase [Alteromonas sp. S89]
Length = 911
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYIRHVDGLPISSEA 309
T + + + DRP + F V T DM + H + ++ FY+ G P+ E
Sbjct: 720 TEVFVYTPDRPNV-FAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLDEP 778
Query: 310 ERE-----------RVIQCLEAAIERRASEGLE--------------------LELCTED 338
R ++++ I+RR L+ LE+ + D
Sbjct: 779 HRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSAD 838
Query: 339 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIGH 397
R GLL+ I RIF + L + A+IST+G +V+D F++TD P+ D +I+++++ I
Sbjct: 839 RPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHITDSEDQPLADNALIETLQQAICQ 898
Query: 398 TKLQVKRSTILAPKP 412
+L ++T L P+P
Sbjct: 899 -ELDAHQAT-LPPQP 911
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 85/178 (47%), Gaps = 24/178 (13%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDK- 84
AT + V + ++ + V+ L+ +NL I A + SS G+ +D F V+D G+ + D+
Sbjct: 719 ATEVFVYTPDRPNVFAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLDEP 778
Query: 85 ----EVIDYIQQRLETDASFA----------------PSLRSSVGVMPTEEHTSIEFTGT 124
++ + +Q+ L+ ++ PS ++ + P + ++++E T
Sbjct: 779 HRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPS-QAHISTEPGDTYSTLEITSA 837
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
DRPGL + + + + NA+I T +R + H+TD S + D + T+++
Sbjct: 838 DRPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHITD-SEDQPLADNALIETLQQ 894
>gi|154254033|ref|YP_001414857.1| PII uridylyl-transferase [Parvibaculum lavamentivorans DS-1]
gi|154157983|gb|ABS65200.1| metal dependent phosphohydrolase [Parvibaculum lavamentivorans
DS-1]
Length = 931
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
PT + T + D PGLF+ A L N+V+A+I+T D A + G AI
Sbjct: 723 PTRDVTQLTLYTQDHPGLFARFAGACAALGMNIVDAKIFTTRDGMALDMLWVQDPEGLAI 782
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+ +R+ ++E++ VL G +S P + E +
Sbjct: 783 SEQRRIIRLEEMIRKVLSG---------EISAPDAI----------------ESRTRRER 817
Query: 232 RVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R E S PQV + N DYTVI + DRP L+ + L + + + T
Sbjct: 818 RAEAFSVAPQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGER 877
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
A FY++ V G +++ +++ V + L A+
Sbjct: 878 AVDVFYVKDVIGHKVTNANKKKAVERHLLEAL 909
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V IDN+ D TVI+V+ +++ G++ + + L + L I A+I++ G +DVF V
Sbjct: 826 PQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDVFYVK 885
Query: 75 DCDGKKI 81
D G K+
Sbjct: 886 DVIGHKV 892
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 41/172 (23%)
Query: 249 KDYTVITMRSKDRPKLL--FDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 306
+D T +T+ ++D P L F C M +V + T A +++ +GL IS
Sbjct: 725 RDVTQLTLYTQDHPGLFARFAGACAALGMN-IVDAKIFTTRDGMALDMLWVQDPEGLAIS 783
Query: 307 SEAERERVIQCLEA-----AIERRASEGLE------------------------------ 331
E+ R+I+ E + E A + +E
Sbjct: 784 ---EQRRIIRLEEMIRKVLSGEISAPDAIESRTRRERRAEAFSVAPQVFIDNDASDDYTV 840
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GL+ ++R L+I A I+T G + D FYV DV G+ V
Sbjct: 841 IEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDVFYVKDVIGHKV 892
>gi|304393801|ref|ZP_07375726.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
gi|303294000|gb|EFL88375.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
Length = 967
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V IDN TVI+++++++ G+L ++ L D++L I A+I++ G F+D F V
Sbjct: 860 PKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVT 919
Query: 75 DCDGKKIRDKEVIDY----IQQRLETDASFAP 102
D G KI ++E +D + + LE +A P
Sbjct: 920 DLVGSKILNEERLDIARATLLEVLENNAHAKP 951
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+EL DR G+LS IT + SL I A I+T G K DTFYVTD+ G+ +
Sbjct: 875 IELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVTDLVGSKI-------- 926
Query: 392 RRQIGHTKLQVKRSTIL 408
+ +L + R+T+L
Sbjct: 927 ---LNEERLDIARATLL 940
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 37/220 (16%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
ETDA+ P + + + E T I D P L S + V A N+ +AEI+T D
Sbjct: 741 ETDAASIP-VATHIATRNFEAITEITLVAPDHPRLLSTITGVCAASGANIEDAEIYTMKD 799
Query: 155 -RAAAVVHVTDHSTGYAIKDP----KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
RA + V G DP +R I + + VLRG
Sbjct: 800 GRALDSIFV-----GRLYDDPDDEKRRARNIADTIEKVLRG------------------- 835
Query: 210 ERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDI 268
E+RL ++ + K R + + P+VT+ N + +TVI + + DR +L I
Sbjct: 836 EKRLSEL------ESQAGKPARRQQAFTITPKVTIDNAASNKFTVIELEALDRSGVLSRI 889
Query: 269 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 308
TL D+ + + T + FY+ + G I +E
Sbjct: 890 TDTLADLSLDIASAHIATYGEKFVDTFYVTDLVGSKILNE 929
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Query: 75 DCDGKKIRDKEVIDYIQQ---------RLETDASFAPSLRSSVGVMP--------TEEHT 117
D D +K R + + D I++ LE+ A + + + P + + T
Sbjct: 814 DPDDEKRRARNIADTIEKVLRGEKRLSELESQAGKPARRQQAFTITPKVTIDNAASNKFT 873
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE DR G+ S + LADL ++ +A I T+ ++ +VTD G I + +RL
Sbjct: 874 VIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVTD-LVGSKILNEERL 932
Query: 178 STIKELLFNVL 188
+ L VL
Sbjct: 933 DIARATLLEVL 943
>gi|289675253|ref|ZP_06496143.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 299
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 217 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 276
Query: 389 --DSIRRQI 395
D+I +Q+
Sbjct: 277 LQDAIVKQL 285
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 102 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 161
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 162 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 200
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 201 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 252
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 253 RVEDVFFITDANNHPLS 269
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 89 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 148
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 149 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 205
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 206 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 264
Query: 168 GYAIKDPK-----RLSTIKELLFNVLRGYD 192
+ + DP+ + + +K+L N +G D
Sbjct: 265 NHPLSDPQLCRQLQDAIVKQLSVNSEQGGD 294
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 181 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 240
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I ++L ++ LR S+
Sbjct: 241 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDAIVKQLSVNSEQGGDLRISI 299
>gi|338707473|ref|YP_004661674.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294277|gb|AEI37384.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 923
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 26/248 (10%)
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
R +++ I+Q TD + S+ MP + T I D PG F + +
Sbjct: 701 RSDVIVENIRQMAATDKA-QKSISVKGKEMPAYDATMISLYAIDHPGFFYRIAGAIHATG 759
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+++A I T D A + H+ G IK + L+ + + + + + +L
Sbjct: 760 GTILDARIHTTRDGMAMDNLLVQHTQGGIIKTGEHLNRMMQAIEDAATSHIRTSNKLAAL 819
Query: 202 SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKD 260
PP +F D VE P V + N D +TVI + ++D
Sbjct: 820 RPP------------LFWRGDAFHVE------------PSVFIDNQASDRFTVIEVNAQD 855
Query: 261 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 320
RP LL D+ C L + + + + T A FY+ + I+++ + + + L A
Sbjct: 856 RPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVSDLLAHKITNQNRLKAIEKRLLA 915
Query: 321 AIERRASE 328
A ER S+
Sbjct: 916 AAERANSK 923
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 834 PSVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 893
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPS 103
D KI ++ + I++RL A A S
Sbjct: 894 DLLAHKITNQNRLKAIEKRLLAAAERANS 922
>gi|319779935|ref|YP_004139411.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165823|gb|ADV09361.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 933
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I +P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDNPARIA 907
Query: 179 TIKELLFNVLRGYDDFRKAKT 199
TI+ L L G R K+
Sbjct: 908 TIRNRLMATLEGIVPERGGKS 928
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 395
DR GLLS+IT + SL I A I+T G KV DTFYVTD+TG +D P I +IR ++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRL 913
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + I I+ RL
Sbjct: 893 TDLTGQKIDNPARIATIRNRL 913
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 29/238 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DAS L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 EADAS-GNKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSD 773
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + + +R + L+ +VL G S P I R +
Sbjct: 774 GRALDTILISREFDRDEDERRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--- 822
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 274
R +V K R E +++ + ++VI + DRP LL +I TL+D
Sbjct: 823 -----PRRGSKVFKIPPRAEIRNT--------LSNRFSVIEVEGLDRPGLLSEITGTLSD 869
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 328
+ + + T + FY+ + G I + A R R++ LE + R +
Sbjct: 870 LSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRLMATLEGIVPERGGK 927
>gi|326503882|dbj|BAK02727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 425
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G+L +++ + D N+ + + Y G +D+F V
Sbjct: 246 VTMDNSLSPVHTLIQIQCGDHKGLLYDIMRTVKDCNIQVSYGRFYAGQKGRCEVDLFAV- 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D++ + RL T+ P + V P E +E +G RP +F
Sbjct: 305 QSDGKKILDQQKQRTMCSRLRTEL-LRPLHVALVNRGPDAELLVANPVEVSGKGRPLVFY 363
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHVT--DHSTGYAIKDPKRLSTIKELLF 185
++ L +LH V AEI H NDR V VH+ DH +++ S I + +
Sbjct: 364 DITLALKNLHRRVFLAEIGRHMVNDREWEVYRVHLGEDDHELSCSVR-----SKIVDSVT 418
Query: 186 NVLRGYD 192
N+L G+D
Sbjct: 419 NMLMGWD 425
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD 377
L+ C DR+GLL D+T + E L+I+R ++ST G+V D F++TD
Sbjct: 122 LKFCCYDRIGLLHDVTCVLCEMELTIRRVKVSTTPDGRVMDLFFITD 168
>gi|307546396|ref|YP_003898875.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
gi|307218420|emb|CBV43690.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
Length = 926
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
A+E LEL DR GLL+ + RIF E +++ A+I+T+G +V+D F++TD G P+
Sbjct: 848 ANERTLLELVAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGAPL 905
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G IRD ++ I+ L E D
Sbjct: 762 AMEQLGLSIHDARIATSSNNWTLNTFIVLDDHGHAIRDPARLEEIRHHLVEELDDPDDYP 821
Query: 98 ---ASFAP----SLRSSVGVM----PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
P R V P E T +E DRPGL + V + + +
Sbjct: 822 QIVTRHTPRQLKHFRVPTEVFIRQDPANERTLLELVAPDRPGLLARVGRIFMEQDIALSA 881
Query: 147 AEIWTHNDRAAAVVHVTD 164
A+I T +R V +TD
Sbjct: 882 AKIATLGERVEDVFFITD 899
>gi|347734806|ref|ZP_08867795.1| PII uridylyltransferase [Azospirillum amazonense Y2]
gi|346922124|gb|EGY02613.1| PII uridylyltransferase [Azospirillum amazonense Y2]
Length = 950
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN A TVI+V+ ++ G+L + + L +NL I A IS+ G +DVF V
Sbjct: 841 PPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYV 900
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++ L
Sbjct: 901 KDIFGLKVAHEAKLTQIRKEL 921
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 27/215 (12%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS--TGY 169
P T + D GLFS + +A ++V+A I T + A V + +G
Sbjct: 736 PGRSVTEVTIYTADHAGLFSRLAGAMALAGGDIVDARITTMTNGMALDVFSLQGAGPSGA 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
++ S +K + L G D + A P + R L
Sbjct: 796 RFDSGEKRSRLKSSVEKALAG--DIKLA------PELAKRASPLPS-----------RTR 836
Query: 230 VGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
V RV P+V V N YTVI + +DRP LL+D+ LT + + ++T
Sbjct: 837 VFRVP-----PRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYG 891
Query: 289 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
A FY++ + GL ++ EA+ ++ + L A ++
Sbjct: 892 NAAVDVFYVKDIFGLKVAHEAKLTQIRKELLAVLD 926
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 322 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
++ +AS G +E+ DR GLL D+TR +L I A+IST G D FYV D+ G
Sbjct: 846 VDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYVKDIFG 905
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 31/151 (20%)
Query: 65 GWFMDVFNV---------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE 115
G +DVF++ D K+ R K +++ L D AP L +P+
Sbjct: 779 GMALDVFSLQGAGPSGARFDSGEKRSRLKS---SVEKALAGDIKLAPELAKRASPLPSRT 835
Query: 116 ------------------HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
+T IE G DRPGL ++ L L+ + +A+I T+ + A
Sbjct: 836 RVFRVPPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAV 895
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +V D G + +L+ I++ L VL
Sbjct: 896 DVFYVKD-IFGLKVAHEAKLTQIRKELLAVL 925
>gi|398826993|ref|ZP_10585213.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
gi|398219320|gb|EJN05805.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
Length = 929
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 911 IKSALTH 917
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|62288144|sp|Q89VX9.2|GLND_BRAJA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 911 IKSALTH 917
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|383775112|ref|YP_005454181.1| [protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
gi|381363239|dbj|BAL80069.1| [Protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
Length = 930
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 911 IKSALTH 917
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|357030239|ref|ZP_09092200.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
gi|355532907|gb|EHH02254.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
Length = 933
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPTRMA 907
Query: 179 TIKELLFNVLRGYDDFRKAKT 199
TI + L L G R K
Sbjct: 908 TIHKRLIETLEGTAPERNGKA 928
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLLS+IT + SL I A I+T G KV DTFYVTD+TG +D P + +
Sbjct: 849 IEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPTRMAT 908
Query: 391 IRRQI 395
I +++
Sbjct: 909 IHKRL 913
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+++ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL-ETDASFAP 102
D G+KI + I +RL ET AP
Sbjct: 893 TDLTGQKIDSPTRMATIHKRLIETLEGTAP 922
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 88/236 (37%), Gaps = 31/236 (13%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
E DA+ L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 EADAA-GKKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSD 773
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + + +R + L+ +VL G S P
Sbjct: 774 GRALDTILISREFDLDEDERRRAERVGRLIEDVLSG--------KSWLPE---------- 815
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLT 273
M + R R V R+ P+ + N + ++VI + DRP LL +I L+
Sbjct: 816 --MIEKRTKPRRGAKVFRIP-----PRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALS 868
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERR 325
D+ + + T + FY+ + G I S +R+I+ LE R
Sbjct: 869 DLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPTRMATIHKRLIETLEGTAPER 924
>gi|27376027|ref|NP_767556.1| PII uridylyl-transferase [Bradyrhizobium japonicum USDA 110]
gi|27349166|dbj|BAC46181.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 110]
Length = 997
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 913 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 971
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 972 APTRQSAIKSALTHVMAG 989
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 919 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 978
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 979 IKSALTH 985
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 904 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 963
Query: 75 DCDGKKI 81
D G +I
Sbjct: 964 DLLGAQI 970
>gi|126461232|ref|YP_001042346.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17029]
gi|126102896|gb|ABN75574.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17029]
Length = 930
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKNRQETLEKKL 917
>gi|384214647|ref|YP_005605811.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
gi|354953544|dbj|BAL06223.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
Length = 929
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 911 IKSALTH 917
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|146276521|ref|YP_001166680.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17025]
gi|145554762|gb|ABP69375.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17025]
Length = 930
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V + G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDAEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A RD ++V+K
Sbjct: 796 EIS---RLPRLTSMIDKTLKGEVVAREAL----------------------RDRDKVKKR 830
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
E + P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 831 ----ESQFRFPTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKTRQETLEKKLRQAI 921
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKTRQETLEKKL 917
>gi|338999274|ref|ZP_08637924.1| PII uridylyl-transferase [Halomonas sp. TD01]
gi|338763838|gb|EGP18820.1| PII uridylyl-transferase [Halomonas sp. TD01]
Length = 891
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 384
A+E LEL DR GLL+ + RIF E +++ A+I+T+G +V+D F++T G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 385 PKIIDSIRRQI 395
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I+ S W ++ F V+D G+ IRD E I+ +++ L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNDWTLNTFIVLDHYGQPIRDPEHIEEMRRHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + +
Sbjct: 789 EIVTRHTPRQLKHFKVPTEVVIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITT-KAGEPLTDPERQQQLRERLIEVL 889
>gi|389879349|ref|YP_006372914.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
gi|388530133|gb|AFK55330.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
Length = 933
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
+I D GLF+ V +A N+V+A I T D A S A D R
Sbjct: 727 AAITVYAPDHHGLFAGVAGAMALAGGNIVDARIVTTTDGMALDTFWVQDSDRSAYDDEVR 786
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++ +++L+ L G + R AK + RD + R +
Sbjct: 787 VARMRDLVGRTLSG--ELRPAKA-----------------LAARRDGPK------RTDVF 821
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V + N TVI + ++DRP LLF I L+D+ + V T A F
Sbjct: 822 QVTPRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTF 881
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIE 323
Y++ V GL I+ + + RV + L AA++
Sbjct: 882 YVKDVFGLKITHQGKLTRVREELLAALD 909
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+IDN TVI+V + ++ G+L + VL+D+ L I A++++ G +D F V
Sbjct: 825 PRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVK 884
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + + +++ L
Sbjct: 885 DVFGLKITHQGKLTRVREEL 904
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 3 DEYAKLIR---RMNPPRVVID--NNTCADATVIKVDSVNKHGILLQVI--QVLNDVNLVI 55
+ +A+L+ R P +VID + I V + + HG+ V L N+V
Sbjct: 697 ERHARLVAKADRQGPAPLVIDVAPDRFRSVAAITVYAPDHHGLFAGVAGAMALAGGNIVD 756
Query: 56 KKAYISSDGGWFMDVFNVIDCDGK----KIRDKEVIDYIQQRLETDASFAPSL------- 104
+ ++DG +D F V D D ++R + D + + L + A +L
Sbjct: 757 ARIVTTTDG-MALDTFWVQDSDRSAYDDEVRVARMRDLVGRTLSGELRPAKALAARRDGP 815
Query: 105 -RSSV-GVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
R+ V V P + T IE T DRPGL + +VL+DL + +A + T+ +
Sbjct: 816 KRTDVFQVTPRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGE 875
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
RA +V D G I +L+ ++E L L
Sbjct: 876 RAVDTFYVKD-VFGLKITHQGKLTRVREELLAAL 908
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ DR GLL IT + + +L+I A ++T G + DTFYV DV G
Sbjct: 840 IEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVKDVFG 888
>gi|429207795|ref|ZP_19199051.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
gi|428189188|gb|EKX57744.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
Length = 930
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKNRQETLEKKL 917
>gi|115487380|ref|NP_001066177.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|77553037|gb|ABA95833.1| ACT domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648684|dbj|BAF29196.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|215704512|dbj|BAG94145.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616648|gb|EEE52780.1| hypothetical protein OsJ_35248 [Oryza sativa Japonica Group]
Length = 279
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DAT++++ ++ G LL ++ L D+ L + K +S++ F+++
Sbjct: 75 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTESAVTQTKFHIM 134
Query: 75 DCDGKKIRDKEVIDYI---------QQRLETDASF---------APSLRSSVGVMPTEEH 116
G+K+ D + ++ I Q E+ + AP + V V+ H
Sbjct: 135 RS-GRKVEDPDTLEKIRLTVINNLLQYHPESSENLAMGEFFGIKAPEKKVDVDVV---TH 190
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+E G DRPGL E+ ++ D++ +V +AEI T A HV+
Sbjct: 191 VIVEDDGPKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEGLVAKDKFHVS--- 247
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ ++L N LR Y R+ +T
Sbjct: 248 ----YRGAKLNSSLSQVLVNCLRYY--LRRPET 274
>gi|344940504|ref|ZP_08779792.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
gi|344261696|gb|EGW21967.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
Length = 881
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+EL T D GLLS I R F + + + A+I+TIG + +D FY+TD P+ DP +
Sbjct: 809 IELITTDHAGLLSKIGRAFVKKDIHLHSAKITTIGSRAEDMFYITDNQSQPITDPATQEQ 868
Query: 391 IRRQI 395
IR +I
Sbjct: 869 IREEI 873
>gi|332560239|ref|ZP_08414561.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
gi|332277951|gb|EGJ23266.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
Length = 938
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 744 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 803
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 804 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 840
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 841 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 894
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 895 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 929
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 861 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 909
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 845 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 904
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 905 KDMFGLKLHQKNRQETLEKKL 925
>gi|221638214|ref|YP_002524476.1| PII uridylyl-transferase [Rhodobacter sphaeroides KD131]
gi|221158995|gb|ACL99974.1| PII uridylyltransferase [Rhodobacter sphaeroides KD131]
Length = 930
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKNRQETLEKKL 917
>gi|94496584|ref|ZP_01303160.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
gi|94423944|gb|EAT08969.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
Length = 920
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 97/247 (39%), Gaps = 29/247 (11%)
Query: 86 VIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
+I +Q LE+ S L + P T + D PGLF V + N++
Sbjct: 700 LIHNVQHILESGDS---PLSIAAQYYPQRGATLVTVYAADHPGLFYRVAGAIHLAGGNII 756
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG 205
+A I T D A + G A P++L I+ + + SLS
Sbjct: 757 DARIHTTRDGVAIDNFLVQDPLGGAFHSPEQLKRIRSAI-------------EDSLS--- 800
Query: 206 IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKL 264
NR R + ++ R R R+E P V + N + +TVI + ++DRP L
Sbjct: 801 --NRHRLITKLA--ARPLPRTRAEAFRIE-----PNVLIDNKASNRFTVIEVNARDRPAL 851
Query: 265 LFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
LF + L + V V T A FYI + G I S+A + + + L AA
Sbjct: 852 LFSLANALFQSKVTVHSAHVATYGERAVDTFYITDLIGGKIESKARLQTLERRLLAAAGG 911
Query: 325 RASEGLE 331
E L+
Sbjct: 912 EVGEALQ 918
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F +
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYIT 885
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI K + +++RL A
Sbjct: 886 DLIGGKIESKARLQTLERRLLAAAG 910
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
+E+ DR LL + ++ +++ A ++T G + DTFY+TD+ G ++ K
Sbjct: 841 IEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYITDLIGGKIESK 895
>gi|77462355|ref|YP_351859.1| PII uridylyl-transferase [Rhodobacter sphaeroides 2.4.1]
gi|91206754|sp|Q3J5H6.1|GLND_RHOS4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77386773|gb|ABA77958.1| uridylyltransferase [Rhodobacter sphaeroides 2.4.1]
Length = 930
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 230 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 837 PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K + ++++L
Sbjct: 897 KDMFGLKLHQKNRQETLEKKL 917
>gi|407695749|ref|YP_006820537.1| protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
gi|407253087|gb|AFT70194.1| Protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
Length = 902
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ T DR GLL+ I RIF + L ++ A I+T+G +V+D F+VTD+ G+PV DP++
Sbjct: 821 VDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFVTDLNGDPVSDPELCQH 880
Query: 391 IR 392
++
Sbjct: 881 LQ 882
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +VVI N+ D TV+ + ++++ G+L + ++ L+++ A I++ G DVF V
Sbjct: 805 PTQVVISNDIVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFV 864
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D +G + D E+ ++Q L
Sbjct: 865 TDLNGDPVSDPELCQHLQDTL 885
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 29/209 (13%)
Query: 8 LIRRMNP--PRVVIDNNTCADA-----TVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-Y 59
L+ R NP P V+I N + I + + + + + L+ + L I A
Sbjct: 682 LLGRPNPEDPLVLIRENQMGQGQTEGGSQIFIYTPDTQNLFAATVNALDSLGLTIMDARI 741
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEV-IDYIQQRLETDASFAPSLRSSVGV-------- 110
I+S G+ +D + V+D G I D I++I+Q L ++V
Sbjct: 742 ITSADGFSLDTYIVLDEHGTPIGDDWPRIEHIRQTLTETLKHPEKFGTTVSRRMPRRHKH 801
Query: 111 --MPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
+PT+ + T ++ DRPGL + + + V NA I T +R V
Sbjct: 802 FDVPTQVVISNDIVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDV 861
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
VTD G + DP+ +++ L L
Sbjct: 862 FFVTD-LNGDPVSDPELCQHLQDTLMQEL 889
>gi|367474181|ref|ZP_09473703.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
gi|365273525|emb|CCD86171.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
Length = 931
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L D
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLLASED 924
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 38/208 (18%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISS 307
V T A FY+ + G I++
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|297599874|ref|NP_001048007.2| Os02g0729500 [Oryza sativa Japonica Group]
gi|255671227|dbj|BAF09921.2| Os02g0729500 [Oryza sativa Japonica Group]
Length = 159
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDR 126
FMDVF+V D G K+ + VI YI+Q L M E T++E TG R
Sbjct: 87 FMDVFHVTDRLGCKLTNDSVITYIEQSLGM-------WNGPTRPMALEGLTALELTGAGR 139
Query: 127 PGLFSEVCAVLADLHC 142
GL SEV AVLAD+ C
Sbjct: 140 TGLISEVFAVLADMDC 155
>gi|158421962|ref|YP_001523254.1| PII uridylyl-transferase [Azorhizobium caulinodans ORS 571]
gi|158328851|dbj|BAF86336.1| protein-P-II uridylyltransferase [Azorhizobium caulinodans ORS 571]
Length = 984
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 95 ETDASFAPSLRSSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
E A P R + V P + HT +E +G DRPGL E+ L+ L+ N+ +
Sbjct: 868 EVMAKKLPKARRTFSVEPEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIAS 927
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
A + T +RA V +VTD G I R STI+ L V G D
Sbjct: 928 AHVATFGERAVDVFYVTD-LMGAKITGAARQSTIRRALIGVFEGSFD 973
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV++V +++ G+L ++ L+ +NL I A++++ G +DVF V
Sbjct: 885 PEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVT 944
Query: 75 DCDGKKI 81
D G KI
Sbjct: 945 DLMGAKI 951
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDS- 390
+E+ DR GLL ++T +L+I A ++T G + D FYVTD+ G + S
Sbjct: 900 VEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVTDLMGAKITGAARQST 959
Query: 391 IRRQI 395
IRR +
Sbjct: 960 IRRAL 964
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S P+VTV N + +TV+ + DRP LLF++ TL+ + + V T A F
Sbjct: 882 SVEPEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVF 941
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIE 323
Y+ + G I+ A + + + L E
Sbjct: 942 YVTDLMGAKITGAARQSTIRRALIGVFE 969
>gi|449439743|ref|XP_004137645.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 292
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 30/177 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 86 PIVIIDQDSDQDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSIT 145
Query: 75 DCD-GKKIRDKEVI---------DYIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E++ + IQ E+ A A + ++ GV+P ++ H
Sbjct: 146 KADTGRKVDDPELLEAIRLTIINNLIQYHPESSAQLA--MGAAFGVVPPKQQVDVDIATH 203
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
+++ G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 204 INVQDDGPDRSLLYVETADRPGLLVDLVKIITDINVAVESGEFDTEGLLAKAKFHVS 260
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
++ T +E T DR G + L +L NVV A ++ + +T TG + D
Sbjct: 96 QDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSITKADTGRKVDD 155
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGR 232
P+ L I+ + N L Y A+ ++ G++ ++++
Sbjct: 156 PELLEAIRLTIINNLIQYHPESSAQLAMGAAFGVVPPKQQV------------------- 196
Query: 233 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
D + V + D +++ + + DRP LL D+V +TD+ V G +T A
Sbjct: 197 --DVDIATHINVQDDGPDRSLLYVETADRPGLLVDLVKIITDINVAVESGEFDTEGLLAK 254
Query: 293 QEFYIRH 299
+F++ +
Sbjct: 255 AKFHVSY 261
>gi|146337664|ref|YP_001202712.1| PII uridylyl-transferase [Bradyrhizobium sp. ORS 278]
gi|166226140|sp|A4YKP3.1|GLND_BRASO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146190470|emb|CAL74469.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 278]
Length = 931
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L D
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLLASED 924
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 38/208 (18%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISS 307
V T A FY+ + G I++
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|359788247|ref|ZP_09291225.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255938|gb|EHK58828.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 935
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
I+ +G DRPGL SE+ L+DL ++ +A I T ++ +V+D TG I +P RL
Sbjct: 849 IDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSD-LTGQKIDNPARLK 907
Query: 179 TIKELLFNVLRG 190
TI++ L L+G
Sbjct: 908 TIRDRLIATLQG 919
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 395
DR GLLS+IT + SL I A I+T G KV DTFYV+D+TG +D P + +IR ++
Sbjct: 855 DRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSDLTGQKIDNPARLKTIRDRL 913
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I N +VI V +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 834 PRVDIRNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVS 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + + I+ RL
Sbjct: 894 DLTGQKIDNPARLKTIRDRL 913
>gi|119477100|ref|ZP_01617336.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
gi|119449463|gb|EAW30701.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
Length = 896
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 22/176 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDGKKI-RDK 84
AT I + + K + L +NL I+ A I S G G+ +D F V+D +G+ I D
Sbjct: 709 ATQIFIHTQQKDSLFAIAASALEQLNLSIQDARIYSSGSGFTLDTFFVLDSNGEPIGNDP 768
Query: 85 EVIDYIQQRL-----ETDAS--------------FAPSLRSSVGVMPTEEHTSIEFTGTD 125
E ID IQ L TD+S F+ R+++ H+ +E D
Sbjct: 769 ERIDEIQSVLMEHLINTDSSLDIMQCRTPRQMRLFSVPTRTTLFTDVAGGHSVLEVLTPD 828
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
RPGL + + + D ++NA+I T + V +TD++ I DP +I+
Sbjct: 829 RPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFITDNNH-QPINDPALCESIQ 883
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ T DR GLL+ I +IF + + + A+I+T+G V D F++TD P+ DP + +S
Sbjct: 822 LEVLTPDRPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFITDNNHQPINDPALCES 881
Query: 391 IRRQI 395
I+ I
Sbjct: 882 IQNAI 886
>gi|92115857|ref|YP_575586.1| PII uridylyl-transferase [Nitrobacter hamburgensis X14]
gi|122418861|sp|Q1QRM1.1|GLND_NITHX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91798751|gb|ABE61126.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Nitrobacter
hamburgensis X14]
Length = 931
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE +G DRPGL ++ A ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 904
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 905 APTRQAAIKRALIHLL 920
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P+V+++N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 829 RLRPFVVEPKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGER 888
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 889 ARDVFYVTDLLGARI 903
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 852 IEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTRQAA 911
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 912 IKRALIH 918
>gi|92112694|ref|YP_572622.1| PII uridylyl-transferase [Chromohalobacter salexigens DSM 3043]
gi|91795784|gb|ABE57923.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Chromohalobacter
salexigens DSM 3043]
Length = 891
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+EL DR GLL+ + RIF E +++ A+I+T+G +V+D F++TD G P+ DP+
Sbjct: 821 VELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGEPLTDPERQAR 880
Query: 391 IRRQIGHT 398
+R ++ T
Sbjct: 881 LRERLCET 888
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 23/179 (12%)
Query: 30 IKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVID 88
I SVN + + + L I A I+ S W ++ F V+D DG+ IRD + ++
Sbjct: 714 IHTRSVND--LFAATAAAMEQLGLSIHDARIATSSNDWTLNTFIVLDDDGEPIRDPQRLE 771
Query: 89 YIQQRL--ETD-----------------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGL 129
I+ L E D F R + T +E T DRPGL
Sbjct: 772 EIRHHLVEELDDPADYPRIVTRHTSRQLKHFKVPTRVVIEQDTANARTIVELTAPDRPGL 831
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+ V + + + A+I T +R V +TD G + DP+R + ++E L L
Sbjct: 832 LARVGRIFMEQDIALSAAKIATLGERVEDVFFITD-KAGEPLTDPERQARLRERLCETL 889
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVVI+ +T T++++ + ++ G+L +V ++ + ++ + A I++ G DVF +
Sbjct: 805 PTRVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFI 864
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+ + D E +++RL
Sbjct: 865 TDKAGEPLTDPERQARLRERL 885
>gi|402850071|ref|ZP_10898284.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
gi|402499632|gb|EJW11331.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
Length = 938
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
SV + +T +E +G DRPGL E+ + L+ L+ N+ +A + T +RA V ++TD
Sbjct: 842 SVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITD-L 900
Query: 167 TGYAIKDPKRLSTIKELLF 185
G I P R++TIK L
Sbjct: 901 MGARITSPTRIATIKRALL 919
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 81/214 (37%), Gaps = 26/214 (12%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
ET+A L + P T + D P L S + A N+V+A+I+T D
Sbjct: 719 ETEAKGGDPLATRYSFDPARGVTVLTVLAPDHPWLLSVIAGACASAGANIVDAQIYTTTD 778
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
A + +R + + L LRG E RL
Sbjct: 779 GLALDTISVSREFERDDDEGRRAGRVVDALERALRG-------------------EMRLP 819
Query: 215 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLT 273
++M R+ A GR P+V+V N YTV+ + DRP LL+++ TL+
Sbjct: 820 EMMAAKRN------AKGRTRPFRVEPEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLS 873
Query: 274 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISS 307
+ + V T A FYI + G I+S
Sbjct: 874 KLNLNITSAHVATFGERAVDVFYITDLMGARITS 907
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV++V +++ G+L ++ L+ +NL I A++++ G +DVF +
Sbjct: 839 PEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYIT 898
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAP 102
D G +I I I++ L FAP
Sbjct: 899 DLMGARITSPTRIATIKRALLL--PFAP 924
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G + D FY+TD+ G + P I +
Sbjct: 854 VEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITDLMGARITSPTRIAT 913
Query: 391 IRRQIGHTKLQVKRSTILAPKPPK 414
I+R + AP+P K
Sbjct: 914 IKRAL---------LLPFAPRPEK 928
>gi|194701562|gb|ACF84865.1| unknown [Zea mays]
gi|413916121|gb|AFW56053.1| ACT domain containing protein [Zea mays]
Length = 271
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 67 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 126
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPT--------EEHTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P H +
Sbjct: 127 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 185
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 239
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S+ ++L N LR Y R+ +T
Sbjct: 240 -YRGAKLNSSSSQVLINCLRYY--LRRPET 266
>gi|422404700|ref|ZP_16481751.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878198|gb|EGH12347.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 118
Score = 55.1 bits (131), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 36 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 95
Query: 391 IRRQI 395
++ I
Sbjct: 96 LQDAI 100
>gi|153871765|ref|ZP_02000853.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
gi|152071768|gb|EDN69146.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
Length = 891
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 24/195 (12%)
Query: 17 VVIDNNTCADAT-VIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVI 74
VV++ T T +I +D+ + NL + AYI SD + + + VI
Sbjct: 694 VVLERQTTRGGTGIIVIDTRGCDYLFADTTYFFEQHNLTVVDAYIIPSDSKYTISGYTVI 753
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMP--------------T 113
+ DG +I KE ++ I Q L ET+A F P R G +
Sbjct: 754 EDDGTEITPKEQVEKILQSLTQALSRDETNAPFYPINRRIPGHLKHFPELTRVTFTQDHI 813
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
HT+++ TDRPG+ S + V A+I T R V VTD+ +A+
Sbjct: 814 NNHTTVQVITTDRPGVLSRIAQAFLTCQIRVKKAKIATFGTRVEDVFFVTDYE-NHALYS 872
Query: 174 PKRLSTIKELLFNVL 188
K+L +++ L +L
Sbjct: 873 SKQLDCLRDKLSELL 887
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ T DR G+LS I + F + +K+A+I+T G +V+D F+VTD + + K +D
Sbjct: 819 VQVITTDRPGVLSRIAQAFLTCQIRVKKAKIATFGTRVEDVFFVTDYENHALYSSKQLDC 878
Query: 391 IRRQIG 396
+R ++
Sbjct: 879 LRDKLS 884
>gi|224097618|ref|XP_002311013.1| predicted protein [Populus trichocarpa]
gi|222850833|gb|EEE88380.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ +++T++++ ++ G L+ + L D+ L + K + ++G F +
Sbjct: 12 PVVLIDQDSDSESTIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTEGPVKQTKFFIT 71
Query: 75 DCD-GKKIRDKEVIDYIQQ-------RLETDASFAPSLRSSVGVMPTEEHTSIEFTG--- 123
D G+K+ D ++++ I+ + ++S ++ + G+ E+ ++ T
Sbjct: 72 RLDSGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVDITTHVH 131
Query: 124 ---------------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ ++AD++ +V +AEI T A HV+ G
Sbjct: 132 VKEDGPKRSLLCVETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHVS--YGG 189
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
A+ S++ ++L N LR Y R+ +T
Sbjct: 190 AALN-----SSLSQVLVNCLRYY--LRRPET 213
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 84/211 (39%), Gaps = 24/211 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E T ++ + DR G + L DL +V + T +T +G ++DP
Sbjct: 23 ESTIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTEGPVKQTKFFITRLDSGRKVEDP 82
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L I+ + N L Y + ++ GI E++L D D V
Sbjct: 83 DMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKL------DVDI------TTHV 130
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
K P+ ++L +E + DRP LL +I+ + D+ V ++T A
Sbjct: 131 HVKEDGPKRSLLCVE---------TADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKD 181
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIER 324
+F++ + G ++S + ++ CL + R
Sbjct: 182 KFHVSY-GGAALNSSLS-QVLVNCLRYYLRR 210
>gi|261856728|ref|YP_003264011.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
gi|261837197|gb|ACX96964.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
Length = 863
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PK 386
E+++ T+DR GLL+DIT F + +S+ A +ST+G +V+D FYV + G+ VD PK
Sbjct: 790 EIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVERQGHAVDSPK 846
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 29/197 (14%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--------DGGW 66
P + I N DA I V + N HG +++ L+ L ++ A ++ +
Sbjct: 661 PVLWISNTPDQDAIQILVLTENSHGQFARIVTELDRSGLNVQSANMTVITPTAAHLEKRA 720
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDAS-------FAPSLRS---SVGVM 111
+ F + +G ++ D +D ++ RL TDA+ P L S + +
Sbjct: 721 LFEFFILDQHNGARL-DHWSLDMLRTRLRDRLQSTDAARTRIHRRSPPQLASIDVATQIQ 779
Query: 112 PTEEH----TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+H T I+ DRPGL +++ ADL ++ +A + T +R +V +
Sbjct: 780 FLSDHRRGRTEIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVERQ- 838
Query: 168 GYAIKDPKRLSTIKELL 184
G+A+ PKR + I+ L
Sbjct: 839 GHAVDSPKRCAEIEAAL 855
>gi|222642143|gb|EEE70275.1| hypothetical protein OsJ_30424 [Oryza sativa Japonica Group]
Length = 473
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G++ +++ L D N+ I + Y S +G +D+F +
Sbjct: 292 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLF-AV 350
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL T+ P + V P E +E +G RP +F
Sbjct: 351 QSDGKKIVDQHKQRALCCRLRTEL-HRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 409
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHV--TDHSTGYAIKDPKRLSTIKELLF 185
++ L LH + AEI H DR V VH+ DHS+ S I + +
Sbjct: 410 DITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSS--------LRSKIVDGVT 461
Query: 186 NVLRGYDD 193
N+L G+DD
Sbjct: 462 NMLMGWDD 469
>gi|163744702|ref|ZP_02152062.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
gi|161381520|gb|EDQ05929.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
Length = 940
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 31/209 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T F D PG+F+ + LA + NVV+A +T D S G A + R
Sbjct: 751 TRASFVMADHPGIFARLAGALALVGANVVDARSYTTKDGFVTDAFWIQDSEGNAY-EASR 809
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRV 233
L +++ + LRG R A S + RER I FD+ E
Sbjct: 810 LPRLRDTIEKTLRGEIVARDALKSRDK--VKKRERAFKVPTHITFDNEGSE--------- 858
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
YT+I + ++DRP LL+D+ TL + + ++ T +
Sbjct: 859 ----------------IYTIIEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVD 902
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAI 322
FY++ + GL +EA++ + + L AI
Sbjct: 903 TFYVKDMFGLKYYTEAKQRTLEKRLREAI 931
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 863 IEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVDTFYVKDMFG 911
>gi|262404596|ref|ZP_06081151.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC586]
gi|262349628|gb|EEY98766.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC586]
Length = 876
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPTE--EH 116
+D +G+ I R + +I ++ Q LE +R + V +PT+ +
Sbjct: 739 LDQNGQAIEENRHQALIHHLVQVLEEGRPTTQKVRRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + D +
Sbjct: 799 TLMEFVALDTPGLLASVGATFAELNFDLHAAKITTIGERAEDLFILTN-SQGARLNDEEE 857
Query: 177 LSTIKELLFNV 187
+ L+ NV
Sbjct: 858 QLLRERLIENV 868
>gi|386399179|ref|ZP_10083957.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
gi|385739805|gb|EIG60001.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
Length = 929
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R + IK L +V+ G
Sbjct: 904 APTRQAAIKSALTHVMAG 921
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 39/198 (19%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 170
T + D P L S + A N+V+A+I+T D RA + ++ D G
Sbjct: 739 TELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG-- 796
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+R + I E++ +VL G L P ++ R
Sbjct: 797 ----RRATRIGEMIEDVLEG---------KLRLPEVVARR-----------------TVR 826
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G+ P+VT+ N D YTVI M DRP LL+++ ++ + + V T
Sbjct: 827 GKARPFVIEPEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGE 886
Query: 290 EAYQEFYIRHVDGLPISS 307
A FY+ + G IS+
Sbjct: 887 RARDVFYVTDLLGAQISA 904
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 851 IEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQISAPTRQAA 910
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 911 IKSALTH 917
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI++ +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|148258814|ref|YP_001243399.1| PII uridylyl-transferase [Bradyrhizobium sp. BTAi1]
gi|166226139|sp|A5ETJ9.1|GLND_BRASB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146410987|gb|ABQ39493.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. BTAi1]
Length = 931
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 38/208 (18%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISS 307
V T A FY+ + G I++
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|409426404|ref|ZP_11260959.1| PII uridylyl-transferase [Pseudomonas sp. HYS]
Length = 899
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNLPLSDPQLCSR 875
Query: 391 IRRQIGHTKLQVKRST 406
++ I +L+V ++T
Sbjct: 876 LQDAIVE-QLRVDQAT 890
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 29/201 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 748 YIVLDNDGDSIGDNPVRVKQIRDGLTDALRNPDDYPTIIQRRVPRQLKHFTFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ADN 864
Query: 169 YAIKDPKRLSTIKELLFNVLR 189
+ DP+ S +++ + LR
Sbjct: 865 LPLSDPQLCSRLQDAIVEQLR 885
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIQRRVPRQLKHFTFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + D ++ +Q
Sbjct: 840 SLQNAKIATLGERVEDVFFITDADNLPLSDPQLCSRLQ 877
>gi|418055379|ref|ZP_12693434.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
gi|353210961|gb|EHB76362.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
Length = 932
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+I+N+ TVI+V ++ G+L ++ VL+D++L I A++++ G +DVF V
Sbjct: 834 PEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 75 DCDGKKI----RDKEVIDYIQQ-RLETDASFAP 102
D GK+I R + + D +Q L+ DA AP
Sbjct: 894 DLVGKQILSEVRQRAIRDRLQSVMLDKDAPVAP 926
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DR GLL ++T + + SL I A ++T G K D FYVTD+ G +I+ +
Sbjct: 849 IEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTDLVGK----QILSEV 904
Query: 392 RRQIGHTKLQVKRSTILAPKPPK 414
R++ +LQ AP P+
Sbjct: 905 RQRAIRDRLQSVMLDKDAPVAPE 927
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE +G DRPGL E+ +VL+DL ++ +A + T ++A V +VTD G I R
Sbjct: 847 TVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTD-LVGKQILSEVR 905
Query: 177 LSTIKELLFNVL 188
I++ L +V+
Sbjct: 906 QRAIRDRLQSVM 917
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
VE + P+V + N + TVI + +DRP LL+++ L+D+ + V T +A
Sbjct: 827 VEAFAVEPEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKA 886
Query: 292 YQEFYIRHVDGLPISSEAERERVIQ 316
FY+ + G I SE R+R I+
Sbjct: 887 VDVFYVTDLVGKQILSEV-RQRAIR 910
>gi|229588801|ref|YP_002870920.1| PII uridylyl-transferase [Pseudomonas fluorescens SBW25]
gi|259492003|sp|C3K5E4.1|GLND_PSEFS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229360667|emb|CAY47525.1| uridylyltransferase [Pseudomonas fluorescens SBW25]
Length = 900
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 389 --DSIRRQIGHTK---LQVKRSTI 407
D+I +Q+ T+ +++ R TI
Sbjct: 877 LQDAIVQQLSVTQEPGVELTRLTI 900
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDKEVI----------------DY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G+ I D V DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPVRVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 86/227 (37%), Gaps = 33/227 (14%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPVRVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCT 336
F+I D P+S R+ + + G+EL T
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQDAIVQQLSVTQEPGVELTRLT 899
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|365884301|ref|ZP_09423359.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
gi|365287146|emb|CCD95890.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
Length = 931
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 38/219 (17%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
V T A FY+ + G I++ + + L
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINAPTRQAAIKSAL 916
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|297810567|ref|XP_002873167.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319004|gb|EFH49426.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + +AT++++ N+ G L+ ++ L D+ L + K +S++G F++
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRSLKDLGLDVIKGTVSTEGDVKQTKFSIT 154
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
D G+K+ D ++++ I+ + + S ++ + G+ E ++
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPENKIDVDIATHIL 214
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADINIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ ++ ++L N LR + R+ +T +
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDI 298
>gi|99080287|ref|YP_612441.1| PII uridylyl-transferase [Ruegeria sp. TM1040]
gi|99036567|gb|ABF63179.1| UTP-GlnB uridylyltransferase GlnD [Ruegeria sp. TM1040]
Length = 893
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 34/241 (14%)
Query: 87 IDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE--FTGTDRPGLFSEVCAVLADLHCNV 144
+D+ + E DA PS V + P E+ + F D PG+F+ + LA + NV
Sbjct: 673 VDFAEMLREIDALDDPSA-MLVRLHPDEDRDATRACFVMPDHPGIFARIAGALALVGANV 731
Query: 145 VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPP 204
V+A +T D + G+ + RL ++ ++ LRG R A S
Sbjct: 732 VDARSYTTKDGFVTDAFWIQDADGHPF-EASRLPRLRSMIEKTLRGEVIARDALKSRDK- 789
Query: 205 GIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDR 261
I RER I FD+ D S YT+I + ++DR
Sbjct: 790 -IKKRERAFRVPTHITFDN--------------DGSD-----------IYTIIEVDTRDR 823
Query: 262 PKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 321
P LL+D+ TL + + ++ T + FY++ + GL S ++++ + + L A
Sbjct: 824 PGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYVKDMFGLKYHSASKQQSLEKKLREA 883
Query: 322 I 322
I
Sbjct: 884 I 884
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R +++ I A I+T G +V D+FYV D+ G
Sbjct: 816 IEVDTRDRPGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYVKDMFG 864
>gi|170740425|ref|YP_001769080.1| PII uridylyl-transferase [Methylobacterium sp. 4-46]
gi|168194699|gb|ACA16646.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium sp. 4-46]
Length = 936
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 101 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
AP L S+ + T +E +G DRPGL ++ L+ L+ N+ +A + T +RA V
Sbjct: 821 APDL--SIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVF 878
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG 205
+VTD TG I P R +TI+ + V G D A+ PPG
Sbjct: 879 YVTD-LTGTKITQPDRQATIRRAVMGVFEG--DAAAAR----PPG 916
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL D+T +L+I A ++T G + D FYVTD+TG + P +
Sbjct: 837 LEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVTDLTGTKITQPDRQAT 896
Query: 391 IRRQIGHTKLQVKRSTILAPKPP 413
IRR + + V A +PP
Sbjct: 897 IRRAV----MGVFEGDAAAARPP 915
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + IDN + TV+++ +++ G+L + L+ +NL I A++++ G +DVF V
Sbjct: 822 PDLSIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVT 881
Query: 75 DCDGKKI 81
D G KI
Sbjct: 882 DLTGTKI 888
>gi|365892864|ref|ZP_09431099.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
gi|365331013|emb|CCE03630.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
Length = 931
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 38/208 (18%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+V++ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISS 307
V T A FY+ + G I++
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|255560331|ref|XP_002521182.1| amino acid binding protein, putative [Ricinus communis]
gi|223539629|gb|EEF41213.1| amino acid binding protein, putative [Ricinus communis]
Length = 214
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P ++ID ++ +DAT ++V ++ G L+ ++ L D+ L + K + ++G F +
Sbjct: 8 PVLLIDQDSDSDATSVQVSFGDRLGALIDTMKALKDLGLDVAKGSVLTEGSVKQIKFFIT 67
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + ++S ++ + G+ E H
Sbjct: 68 RLDSGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPERKLDVDIATHIH 127
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL E+ ++AD++ +V +AEI T A HV+ G
Sbjct: 128 VKDDGPKRSLLYIETADRPGLLVEMIKIMADINVDVESAEIDTEGLVAKDKFHVS--YRG 185
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
A+ S++ ++L N LR Y R+ +T
Sbjct: 186 AALN-----SSMSQVLVNCLRYY--LRRPET 209
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 24/211 (11%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ TS++ + DR G + L DL +V + T +T +G ++DP
Sbjct: 19 DATSVQVSFGDRLGALIDTMKALKDLGLDVAKGSVLTEGSVKQIKFFITRLDSGRKVEDP 78
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L I+ + N L Y + ++ GI ER+L V+ A +
Sbjct: 79 DMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPERKLD-----------VDIAT-HI 126
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
K P+ ++L IE + DRP LL +++ + D+ V ++T A
Sbjct: 127 HVKDDGPKRSLLYIE---------TADRPGLLVEMIKIMADINVDVESAEIDTEGLVAKD 177
Query: 294 EFYIRHVDGLPISSEAERERVIQCLEAAIER 324
+F++ + G ++S + ++ CL + R
Sbjct: 178 KFHVSY-RGAALNSSMS-QVLVNCLRYYLRR 206
>gi|254488051|ref|ZP_05101256.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
gi|214044920|gb|EEB85558.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
Length = 928
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F TD PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 743 FVMTDHPGIFARLAGALALVGANVVDARSYTTKDGYVTGAFWIQDADGNPY-DIARLPRL 801
Query: 181 KELLFNVLRGYDDFRKAKTSL-SPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDK 236
++++ L+G KA+ L S + RE+ I FD+ E
Sbjct: 802 RQMIGKTLKGEI---KAREELKSRDKVKKREKAFRVPTHITFDNEGSE------------ 846
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
YT+I + ++DRP LL+D+ +L + + + ++ T + FY
Sbjct: 847 -------------IYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFY 893
Query: 297 IRHVDGLPISSEAER----ERVIQCLEAAIER 324
++ + GL SE+++ +R+ + A +ER
Sbjct: 894 VKDMFGLKYYSESKQKTLEKRLRTAIAAGVER 925
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R E+++ I A I+T G +V DTFYV D+ G
Sbjct: 851 IEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYVKDMFG 899
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V
Sbjct: 835 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYV 894
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G K + +++RL T
Sbjct: 895 KDMFGLKYYSESKQKTLEKRLRT 917
>gi|52425360|ref|YP_088497.1| PII uridylyl-transferase [Mannheimia succiniciproducens MBEL55E]
gi|81170622|sp|Q65SZ8.1|GLND_MANSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|52307412|gb|AAU37912.1| GlnD protein [Mannheimia succiniciproducens MBEL55E]
Length = 875
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDS 390
E+EL T D+ GLL+D++ +F E +LSI+ A+I+TIG K +D F +T+ G + +
Sbjct: 806 EMELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKGEALSER---- 861
Query: 391 IRRQIGHTKLQVK 403
RQ KLQ +
Sbjct: 862 -ERQSLSEKLQAR 873
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N A T + + ++ + L+V+ + + L I A I +S G+ D F V +
Sbjct: 688 VKISNRFSAGGTEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYAFDSFIVTE 747
Query: 76 CDG-------KKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--HTSI 119
DG +++ +K +I+ + Q E ++++ V + TE+ HT +
Sbjct: 748 LDGSLLKFDRRRVLEKAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNTEKTTHTEM 807
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E D+ GL ++V V ++L+ ++ NA+I T ++A +T+ + G A+ + +R S
Sbjct: 808 ELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTN-AKGEALSERERQSL 866
Query: 180 IKEL 183
++L
Sbjct: 867 SEKL 870
>gi|402699411|ref|ZP_10847390.1| PII uridylyl-transferase [Pseudomonas fragi A22]
Length = 900
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFVTDENNQPLSDPQL 873
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPNIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGMIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF V D + + + D ++ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDENNQPLSDPQLCMRLQE 879
>gi|375266429|ref|YP_005023872.1| PII uridylyl-transferase [Vibrio sp. EJY3]
gi|369841749|gb|AEX22893.1| PII uridylyl-transferase [Vibrio sp. EJY3]
Length = 874
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 6 AKLIRR--MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R + P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDLTKPLVLISKKATRGGTEVFVYSKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSS 107
G +D F V+D G+ I R VI ++ LE P ++++
Sbjct: 728 KDGHVIDTFIVLDQHGEAIDESRHAAVIKHLTHVLEDGRPTKIKTRRTPHKLQHFNVKTK 787
Query: 108 VGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT ++HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTRGKKHTLMEFVALDTPGLLAKVGRTFADLNINIHGAKITTIGERAEDLFILTSG 847
Query: 166 STG 168
+ G
Sbjct: 848 TGG 850
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E D GLL+ + R F + +++I A+I+TIG + +D F +T TG + + +++
Sbjct: 801 MEFVALDTPGLLAKVGRTFADLNINIHGAKITTIGERAEDLFILTSGTGGRLSEEQQNAL 860
Query: 392 RRQI 395
R Q+
Sbjct: 861 REQL 864
>gi|429330794|ref|ZP_19211576.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
gi|428764574|gb|EKX86707.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
Length = 900
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF + LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQDAI 881
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 172
E T I D+ F+ A + L+ N+ +A I T + + + V D+ G
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGN 761
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
+P+R+ I++ L + LR DD+ P I++R R+L F
Sbjct: 762 NPQRVKQIRDGLSDALRNPDDY---------PSIIHRRVPRQLKHFAFP----------- 801
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+LN ++ T++ + + DRP LL I D + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLETDASFAPSL--------------RSSVGVM 111
+ V+D DG I R K++ D + L + PS+ V ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLSDALRNPDDY-PSIIHRRVPRQLKHFAFPPQVTIL 807
Query: 112 PTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ T +E DRPGL + + + D ++ NA+I T +R V +TD +
Sbjct: 808 NDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITD-ADNQ 866
Query: 170 AIKDPKRLSTIKELLFNVLR-----GYDDFR 195
+ DP+ S +++ + LR G + FR
Sbjct: 867 PLSDPQLCSRLQDAIVEQLRVDQASGTESFR 897
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ D +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVI----DYIQQRLETD-ASFAPSLRSSV 108
D D + + D ++ D I ++L D AS S R ++
Sbjct: 861 TDADNQPLSDPQLCSRLQDAIVEQLRVDQASGTESFRLTI 900
>gi|226530840|ref|NP_001151043.1| ACT domain containing protein [Zea mays]
gi|195643854|gb|ACG41395.1| ACT domain containing protein [Zea mays]
Length = 273
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 128
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPT--------EEHTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P H +
Sbjct: 129 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 187
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 241
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S+ ++L N LR Y R+ +T
Sbjct: 242 -YRGAKLNSSSSQVLINCLRYY--LRRPET 268
>gi|451970864|ref|ZP_21924088.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
gi|451933281|gb|EMD80951.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
Length = 874
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|329893768|ref|ZP_08269856.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
gi|328923491|gb|EGG30805.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
Length = 891
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 320 AAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 378
A I + +GL LE+ + DR GLL+ + R+F E + I+ A+I T+G +V+D F++TD
Sbjct: 802 AQITQDHDKGLSILEVISPDRPGLLARLGRVFVEFGIEIQTAKIQTLGERVEDLFFITDA 861
Query: 379 TGNPV-DPKIIDSIRRQI 395
NP+ DP + I I
Sbjct: 862 QQNPITDPDLCQQIEAAI 879
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 30/194 (15%)
Query: 20 DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDG 78
++++ A+AT + + + ++ + + L ++L I A I + GG +D F V+D G
Sbjct: 695 NDSSVANATQMFIHARSRPHLFSLICATLEQLDLSIHDARIYGASGGMTLDTFFVLDSSG 754
Query: 79 KKI-----RDKEVIDYIQQRLETDA---------------SFAPSLRSSVGVMPTEEH-- 116
+ I R + VI + L A SF+ R+ + T++H
Sbjct: 755 ETIEHDAQRTRHVISELTTALTESAKTNGIATRRTPRQFKSFSIPTRAQI----TQDHDK 810
Query: 117 --TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E DRPGL + + V + + A+I T +R + +TD I DP
Sbjct: 811 GLSILEVISPDRPGLLARLGRVFVEFGIEIQTAKIQTLGERVEDLFFITDAQQN-PITDP 869
Query: 175 KRLSTIKELLFNVL 188
I+ + + L
Sbjct: 870 DLCQQIEAAIRDTL 883
>gi|91223471|ref|ZP_01258736.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
gi|91191557|gb|EAS77821.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
Length = 874
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|90415791|ref|ZP_01223724.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
gi|90332165|gb|EAS47362.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
Length = 904
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 32/164 (19%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 310
T I + SKDR I L + + +N+ A+ FY+ PI +
Sbjct: 704 TQIFVHSKDRANNFSIIASALDRLNLNIHDARLNSNSDGSAFDVFYVLDEQDQPIGQDRL 763
Query: 311 R-ERVIQCLEAAI----------ERRASEGLE--------------------LELCTEDR 339
R E+++Q L AI ++R L+ LE+ T DR
Sbjct: 764 RCEKIVQTLSGAIADPSKINAYVQQRTPRQLKNFALKTTAKLRHDVDANCVILEIITPDR 823
Query: 340 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
GLL+ +T+IF L + A+IST+G +V+D FY+TD P+
Sbjct: 824 PGLLAHLTQIFVRFELRVLHAKISTLGERVEDIFYLTDKNFEPL 867
>gi|317152370|ref|YP_004120418.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
gi|316942621|gb|ADU61672.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
Length = 873
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR+G L D+ R + LSI A+I+TI G+ D F+V D TG + DP+ I++
Sbjct: 802 VEVAAPDRIGFLHDMARTLSGHGLSIHIAKITTIKGRAADIFHVRDHTGAKLTDPERIET 861
Query: 391 IRRQIGHT 398
+RR + H
Sbjct: 862 LRRDLLHA 869
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 101 APSLRSSVGV--MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
AP LR V V ++ T +E DR G ++ L+ ++ A+I T RAA
Sbjct: 782 APRLRPIVTVDNQGSDFFTLVEVAAPDRIGFLHDMARTLSGHGLSIHIAKITTIKGRAAD 841
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
+ HV DH TG + DP+R+ T++ L +
Sbjct: 842 IFHVRDH-TGAKLTDPERIETLRRDLLHA 869
>gi|269966249|ref|ZP_06180338.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
gi|269829164|gb|EEZ83409.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
Length = 877
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 673 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 732
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 733 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 792
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 793 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 852
Query: 168 G 168
G
Sbjct: 853 G 853
>gi|192362270|ref|YP_001981600.1| PII uridylyl-transferase [Cellvibrio japonicus Ueda107]
gi|190688435|gb|ACE86113.1| protein-P-II uridylyltransferase [Cellvibrio japonicus Ueda107]
Length = 905
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 5 YAKLIRRMNPPRVVID---NNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI- 60
+A R + P V+I N A AT I V S ++ + + V L +NL I+ A I
Sbjct: 692 HAIAARTDDQPLVLIKKTANKELAGATQIFVYSKDQKNVFVAVATALAQLNLSIQDAKIY 751
Query: 61 SSDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDAS-------------------F 100
SS+ G +D F V++ DG+ + + ++ IQQ L + F
Sbjct: 752 SSNSGHTIDTFFVLNEDGEPLGNNPTLLKKIQQTLIDELGLVDNYRDVIGRRTPRRLKYF 811
Query: 101 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
A R+S+ + +E DRPGL + + + D ++NA+I T +R +
Sbjct: 812 ASPTRTSLNTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIF 871
Query: 161 HVTDHSTGYAIKDP 174
+ D S G + DP
Sbjct: 872 FIVD-SQGKPLGDP 884
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ + DR GLL+ I RIF + + + A+I+T+G +V+D F++ D G P+ DP + +
Sbjct: 830 LEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFFIVDSQGKPLGDPVLCEK 889
Query: 391 IRRQI 395
++++I
Sbjct: 890 LQQEI 894
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 46/82 (56%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+P R ++ + + +V++V S ++ G+L + ++ D ++ + A I++ G D+F
Sbjct: 813 SPTRTSLNTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFF 872
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
++D GK + D + + +QQ +
Sbjct: 873 IVDSQGKPLGDPVLCEKLQQEI 894
>gi|407972980|ref|ZP_11153893.1| PII uridylyl-transferase [Nitratireductor indicus C115]
gi|407431751|gb|EKF44422.1| PII uridylyl-transferase [Nitratireductor indicus C115]
Length = 932
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDSIRRQIG 396
DR GLLS++T + SL I A I+T G KV DTFYVTD+TG V P +D+I R +
Sbjct: 853 DRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIVSPDRLDAICRALL 912
Query: 397 HT 398
T
Sbjct: 913 ET 914
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNV 144
E+I+ + + +F R +G + + +E G DRPGL SE+ L+DL ++
Sbjct: 813 EIIEKRARPRRSTRAFRVEPRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDI 872
Query: 145 VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+A I T ++ +VTD TG I P RL I L L
Sbjct: 873 ASAHITTFGEKVIDTFYVTD-LTGQKIVSPDRLDAICRALLETL 915
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I N +V+++ +++ G+L ++ + L+D++L I A+I++ G +D F V
Sbjct: 832 PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + +D I + L
Sbjct: 892 DLTGQKIVSPDRLDAICRAL 911
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 30/215 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + + N+V+A+I+T A + + + +R
Sbjct: 734 TEVTVFAPDHPRLLSVIAGACSAAGANIVDAQIFTTTHGRALDTILIGREFDFDEDERRR 793
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I L+ +VL G KT L P I+ + R R RVE
Sbjct: 794 AERIGRLIEDVLSG-------KTYL--PEIIEKRAR-----------PRRSTRAFRVE-- 831
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+V + N + ++V+ ++ DRP LL ++ TL+D+ + + T + F
Sbjct: 832 ---PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTF 888
Query: 296 YIRHVDGLPISS----EAERERVIQCLEAAIERRA 326
Y+ + G I S +A +++ LE ++R A
Sbjct: 889 YVTDLTGQKIVSPDRLDAICRALLETLEHGVQRPA 923
>gi|421143790|ref|ZP_15603722.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
gi|404505051|gb|EKA19089.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQEAI 881
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G+ I D E + I++ L TDA +FAP + +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 33/223 (14%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L + LR DD+ P I+ R R+L F
Sbjct: 762 NPERVKKIRKGLTDALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+VT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL 332
F+I D P+S R+ + + + G+E+
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQEAIVQQLSVNQETGVEM 895
>gi|357160225|ref|XP_003578696.1| PREDICTED: uncharacterized protein LOC100833127 [Brachypodium
distachyon]
Length = 421
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 246 NIEKDYTVITMRSKD---------RPKLLFDIVCTLTDMQ------YVVFHGMVNTGRTE 290
++ D TV+T+ D R LLF + DM Y+V + GRT
Sbjct: 15 DVAGDPTVVTISCPDKTGLGCDLCRVVLLFGLNVLKGDMSTDGRWCYIVLWVVARRGRTM 74
Query: 291 AYQEFYIRHVDGLPISSEAERER---VIQCLEAAIERRASEGLELELCTEDRVGLLSDIT 347
A+ R V+ P+SS + L+ +E A L+ DR+GLL D+T
Sbjct: 75 AWDLLKERLVELCPVSSLCGLDSSYLAAAGLQEDLEPAAPRVFLLKFSCYDRMGLLHDVT 134
Query: 348 RIFRENSLSIKRAEISTI-GGKVKDTFYVTD 377
+ E L+I+R ++ST G+V D F++TD
Sbjct: 135 HVLSEMELTIRRVKVSTTPDGRVMDLFFITD 165
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ ++I++ + G+L +++ L D ++ I + Y +D+F V
Sbjct: 242 VTMDNSLSPVHSLIQIQCGDHKGLLYDIMRTLKDCDIQISYSRFYAGRKDRCEVDLFAV- 300
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D++ + RL + P + V P E +E +G RP +
Sbjct: 301 QSDGKKILDQQKQRALCSRLRMEL-LHPLRVALVNRGPDMELLVANPVEISGKGRPLVLH 359
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHVT--DHSTGYAIKDPKRLSTIKELLF 185
++ L +LH + AEI H +DR V VH+ DH A++ I + +
Sbjct: 360 DITLALKNLHRRIFLAEIGRHVVDDREWEVYRVHLGEDDHELSCAVR-----RKIVDGVT 414
Query: 186 NVLRGYD 192
N+L G++
Sbjct: 415 NMLMGWE 421
>gi|262393517|ref|YP_003285371.1| [protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|262337111|gb|ACY50906.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 874
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|395794807|ref|ZP_10474124.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
gi|395341076|gb|EJF72900.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQEAI 881
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G+ I D E + I++ L TDA +FAP + +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 33/223 (14%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L + LR DD+ P I+ R R+L F
Sbjct: 762 NPERVKKIRKGLTDALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+VT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL 332
F+I D P+S R+ + + + G+E+
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQEAIVQQLSVNQETGVEM 895
>gi|336123498|ref|YP_004565546.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
gi|335341221|gb|AEH32504.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
Length = 874
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L++ +P P +++ T + V + ++ + V+ L+ NL + A I SS
Sbjct: 670 LLKHSDPSQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKIRDK---EVIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G I ++ +I ++ LET LR + V
Sbjct: 730 GYVLDTFMVLDQNGHAIDEECHPSLIKHLLSGLETGWQNKLKLRRTPRNLQHFKVKTKVD 789
Query: 110 VMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 790 FLPTKSNKRTLMELVALDTPGLLATVGATFADLNINLHGAKITTIGERAEDLFILTGSQG 849
Query: 168 GYAIKDPKRLSTIKELL 184
G ++ + T++E+L
Sbjct: 850 GKLSEEEE--CTLREML 864
>gi|254229487|ref|ZP_04922901.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|151937952|gb|EDN56796.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 301
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 97 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 156
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 157 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 216
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 217 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 276
Query: 168 G 168
G
Sbjct: 277 G 277
>gi|374703800|ref|ZP_09710670.1| PII uridylyl-transferase [Pseudomonas sp. S9]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+EL DR GLL+ + RIF + LSI+ A+I+T+G +V+D F+VTD + DP++
Sbjct: 817 IELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVTDANNQQLSDPELCTR 876
Query: 391 IRRQIGHTKLQVKRSTILAPKPPKET 416
++ I Q+ ++ L +P K T
Sbjct: 877 LQETIVS---QLSDASTLGAEPSKIT 899
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P PRV I N+ TVI++ + ++ G+L +V ++ D +L
Sbjct: 781 DDYPSIIQRRVPRQLKHFDFAPRVTIHNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
I+ A I++ G DVF V D + +++ D E+ +Q+ + + S A S++G P+
Sbjct: 841 SIQNAKIATLGERVEDVFFVTDANNQQLSDPELCTRLQETIVSQLSDA----STLGAEPS 896
Query: 114 E 114
+
Sbjct: 897 K 897
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T + + + ++H + + +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQLFIYAQDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD---------KEVID----------YIQQRLETDAS---FAPSLRSSV 108
+ V++ DG I D + +ID IQ+R+ FAP R ++
Sbjct: 749 YIVLEGDGSSIGDNPARIKQIRQGLIDALINPDDYPSIIQRRVPRQLKHFDFAP--RVTI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T IE T DRPGL + V + D ++ NA+I T +R V VTD +
Sbjct: 807 HNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVTD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ + ++E + + L
Sbjct: 866 QQLSDPELCTRLQETIVSQL 885
>gi|388471183|ref|ZP_10145392.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
gi|388007880|gb|EIK69146.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 388
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 389 --DSIRRQIGHTK---LQVKRSTI 407
D+I Q+ T+ +++ R TI
Sbjct: 877 LQDAIVEQLSVTQEPGVELTRLTI 900
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 86/227 (37%), Gaps = 33/227 (14%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCT 336
F+I D P+S R+ + + G+EL T
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQDAIVEQLSVTQEPGVELTRLT 899
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|254785172|ref|YP_003072600.1| PII uridylyl-transferase [Teredinibacter turnerae T7901]
gi|237686077|gb|ACR13341.1| protein-P-II uridylyltransferase [Teredinibacter turnerae T7901]
Length = 905
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ + DR GLL+ I ++F E+ + ++ A+IST+G +V+D F++TD P+ DP++ +
Sbjct: 827 LEVISPDRPGLLATIGQVFMEHDVQLQNAKISTLGERVEDVFFITDADNQPLGDPRLCRA 886
Query: 391 IRRQI 395
++ I
Sbjct: 887 LQDDI 891
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P R I N+ + TV++V S ++ G+L + QV + ++ ++ A IS+ G DVF +
Sbjct: 811 PTRTSISNDIVSGNTVLEVISPDRPGLLATIGQVFMEHDVQLQNAKISTLGERVEDVFFI 870
Query: 74 IDCDGKKIRDKEVIDYIQ 91
D D + + D + +Q
Sbjct: 871 TDADNQPLGDPRLCRALQ 888
>gi|215687047|dbj|BAG90893.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 271
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G++ +++ L D N+ I + Y S +G +D+F +
Sbjct: 90 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLF-AV 148
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL T+ P + V P E +E +G RP +F
Sbjct: 149 QSDGKKIVDQHKQRALCCRLRTEL-HRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 207
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHV--TDHSTGYAIKDPKRLSTIKELLF 185
++ L LH + AEI H DR V VH+ DHS+ S I + +
Sbjct: 208 DITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSS--------LRSKIVDGVT 259
Query: 186 NVLRGYDD 193
N+L G+DD
Sbjct: 260 NMLMGWDD 267
>gi|398930982|ref|ZP_10664913.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
gi|398164505|gb|EJM52641.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD +P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDADGDSIGDNPARTKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP S +++ + L
Sbjct: 866 HPLSDPLLCSRLQDAIVEQL 885
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPARTKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNHPLS 869
>gi|395500382|ref|ZP_10431961.1| PII uridylyl-transferase [Pseudomonas sp. PAMC 25886]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQEAI 881
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G+ I D E + I++ L TDA +FAP + +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 33/223 (14%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P+R+ I++ L + LR DD+ P I+ R R+L F
Sbjct: 762 NPERVKKIRKGLTDALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+VT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL 332
F+I D P+S R+ + + + G+E+
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQEAIVQQLSVNQETGVEM 895
>gi|398892828|ref|ZP_10645783.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
gi|398184929|gb|EJM72355.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD +P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP S +++ + L
Sbjct: 866 HPLSDPLLCSRLQDAIVEQL 885
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPARIKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNHPLS 869
>gi|421595977|ref|ZP_16039900.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271916|gb|EJZ35673.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 534
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 450 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 508
Query: 173 DPKRLSTIKELLFNVLRG 190
P R + IK L +V+ G
Sbjct: 509 APTRQAAIKSALTHVMAG 526
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 456 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQAA 515
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 516 IKSALTH 522
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 441 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 500
Query: 75 DCDGKKI 81
D G +I
Sbjct: 501 DLLGAQI 507
>gi|444377211|ref|ZP_21176444.1| [Protein-PII] uridylyltransferase [Enterovibrio sp. AK16]
gi|443678676|gb|ELT85343.1| [Protein-PII] uridylyltransferase [Enterovibrio sp. AK16]
Length = 873
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N T I V S ++ + +V+ L+ NL + A I +S G+ +D F V
Sbjct: 680 PLVLVSKNATRGGTEIFVYSQDRPSLFARVVAALDKKNLSVHDAQIMTSKDGFALDTFMV 739
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDAS------------FAPSLRSSVGVMPTE--EH 116
+D + I R +++ + + L D A ++++ V +PT
Sbjct: 740 LDSHNEAIQPDRHEKIREGVTLALTQDGPITIPVKRASRKLMAFNVKTQVSFLPTRTGRR 799
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E D PGL + V AV A ++ A+I T +RA VTD A+ D +
Sbjct: 800 TLLELVALDTPGLLARVGAVFAREGVSLQAAKITTIGERAEDFFIVTD-GERQALSDEVQ 858
Query: 177 LSTIKELLFNVL 188
T+KE LF+ L
Sbjct: 859 -KTLKEALFDAL 869
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 47/282 (16%)
Query: 133 VCAVLADLHCNVVNAEIWTHNDRA--AAVVHVTDHSTGYAIKDP----KRLSTIKELLFN 186
+C +AD+ N N E+W R A + + T + +++P +R+ + L
Sbjct: 576 ICLTVADI--NATNPELWNSWKRTLLAELYYSTQKALRRGLENPPDIRERIRHNQHLASA 633
Query: 187 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV-EDKSSRPQVTVL 245
+LR K +P I +R F ++++ + + P V V
Sbjct: 634 LLR--------KHGHTPREIELLWQRFKADYFLRHTHKQIAWHSEHILSHEGDEPLVLVS 685
Query: 246 -NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYI--RHVD 301
N + T I + S+DRP L +V L V + T + A F + H +
Sbjct: 686 KNATRGGTEIFVYSQDRPSLFARVVAALDKKNLSVHDAQIMTSKDGFALDTFMVLDSHNE 745
Query: 302 GL-PISSEAERERVIQCL--EAAIE---RRASEGLE--------------------LELC 335
+ P E RE V L + I +RAS L LEL
Sbjct: 746 AIQPDRHEKIREGVTLALTQDGPITIPVKRASRKLMAFNVKTQVSFLPTRTGRRTLLELV 805
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
D GLL+ + +F +S++ A+I+TIG + +D F VTD
Sbjct: 806 ALDTPGLLARVGAVFAREGVSLQAAKITTIGERAEDFFIVTD 847
>gi|389774314|ref|ZP_10192433.1| PII uridylyl-transferase [Rhodanobacter spathiphylli B39]
gi|388437913|gb|EIL94668.1| PII uridylyl-transferase [Rhodanobacter spathiphylli B39]
Length = 870
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V VL+ + + +A I SS G +D F +
Sbjct: 677 PLVAVHPLSVRGSTELFVCTPDRDGLFATVTAVLDRLRFSVMEARILSSSTGMALDTFLL 736
Query: 74 IDCDGKK----IRDKEVIDYIQQRLETDASFAPSLRS------------SVGVMPTEEHT 117
+D D ++ R +E+ +Q+ L A PS R + + T
Sbjct: 737 LDADSQQPVSAARAQELQQRLQRALAQSAGVQPSKRGMSRHQKHFQMTPRISFHAAGDRT 796
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ GTDRPGL + V V++ V +A I T +R +TD
Sbjct: 797 QLALVGTDRPGLLAAVAQVMSSTGVRVHDARIATFGERVEDFFQLTD 843
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
A + +L L DR GLL+ + ++ + + A I+T G +V+D F +TD P+D
Sbjct: 792 AGDRTQLALVGTDRPGLLAAVAQVMSSTGVRVHDARIATFGERVEDFFQLTDRHDEPLDA 851
Query: 386 KI 387
I
Sbjct: 852 GI 853
>gi|387892452|ref|YP_006322749.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
gi|387162642|gb|AFJ57841.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQL 873
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPQ 872
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPQLCLRLQ 878
>gi|300024976|ref|YP_003757587.1| UTP-GlnB uridylyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526797|gb|ADJ25266.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
ATCC 51888]
Length = 932
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P +VI+N TVI+V ++ G+L ++ L+D++L I A++++ G +DVF V
Sbjct: 834 PEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 75 DCDGKK----IRDKEVIDYIQQ-RLETDASFAP 102
D GK+ +R + + D +Q L+ DAS AP
Sbjct: 894 DLTGKQVVSEVRQRTIRDRLQTILLDNDASVAP 926
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E T IE +G DRPGL E+ + L+DL ++ +A + T ++A V +VTD TG +
Sbjct: 843 SERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTD-LTGKQVV 901
Query: 173 DPKRLSTIKELLFNVL 188
R TI++ L +L
Sbjct: 902 SEVRQRTIRDRLQTIL 917
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 319 EAAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
E I SE L +E+ DR GLL ++T + SL I A ++T G K D FYVTD
Sbjct: 835 EIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTD 894
Query: 378 VTGNPVDPKIIDSIRRQIGHTKLQ 401
+TG +++ +R++ +LQ
Sbjct: 895 LTGK----QVVSEVRQRTIRDRLQ 914
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
VE + P++ + N + + TVI + +DRP LL+++ L+D+ + V T +A
Sbjct: 827 VEAFAVEPEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKA 886
Query: 292 YQEFYIRHVDGLPISSEAERERVIQ 316
FY+ + G + SE R+R I+
Sbjct: 887 VDVFYVTDLTGKQVVSEV-RQRTIR 910
>gi|398858407|ref|ZP_10614097.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
gi|398239133|gb|EJN24848.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ + IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|398907733|ref|ZP_10654028.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
gi|398171049|gb|EJM58964.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|398843542|ref|ZP_10600681.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
gi|398102080|gb|EJL92269.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ + IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|398877479|ref|ZP_10632624.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
gi|398202374|gb|EJM89220.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|399003066|ref|ZP_10705737.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
gi|398123470|gb|EJM13019.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|456358634|dbj|BAM93079.1| Uridylyl-removing enzyme [Agromonas oligotrophica S58]
Length = 931
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 904
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 905 APTRQAAIKSALLHLL 920
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 83/208 (39%), Gaps = 38/208 (18%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-- 163
+VG P T + D P L S + A N+V+A+I+T D RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 164 ---DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D G +R + I E + VL G K L P + R R Q
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ----- 829
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
KA S P+VT+ N + YTVI + DRP LL+++ ++ + +
Sbjct: 830 ------HKAF------SVEPEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNI 877
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISS 307
V T A FY+ + G I++
Sbjct: 878 ASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|354594396|ref|ZP_09012435.1| PII uridylyl-transferase [Commensalibacter intestini A911]
gi|353672072|gb|EHD13772.1| PII uridylyl-transferase [Commensalibacter intestini A911]
Length = 975
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 5 YAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
Y + +R ++ PPRVVIDN TVI+V+ ++ G+L V + + + L I A+I++
Sbjct: 851 YGRRMRAIHVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTY 910
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
G +DVF V D G K++D++ + +++
Sbjct: 911 GIRAVDVFYVKDVFGLKVQDRKRLSIVRE 939
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 27/218 (12%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ LA ++V+A I T + +
Sbjct: 755 LPDRGVTEVTVYAGDHPGLFSKISGALAVAGASIVDARIHTLTNGMVLDTFWIQDAAQDV 814
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
DP RL I EL+ L G D K R + ++ M Y R +A+
Sbjct: 815 FDDPHRLERIIELINTALAGTVDIEK------------RLQECNRHML----YGRRMRAI 858
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
P+V + N + +TVI + +DR LL+D+ T+ + + + + T
Sbjct: 859 ------HVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGI 912
Query: 290 EAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIE 323
A FY++ V GL + RE +++ LE E
Sbjct: 913 RAVDVFYVKDVFGLKVQDRKRLSIVREAILKVLEEVEE 950
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 322 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
I+ +AS G +E+ DR+GLL D+T+ +E L I A I+T G + D FYV DV G
Sbjct: 866 IDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYVKDVFG 925
Query: 381 NPV-DPKIIDSIRRQI 395
V D K + +R I
Sbjct: 926 LKVQDRKRLSIVREAI 941
>gi|398917470|ref|ZP_10658173.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
gi|398172864|gb|EJM60716.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDADGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|343500492|ref|ZP_08738384.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|418477317|ref|ZP_13046450.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342820208|gb|EGU55034.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|384575057|gb|EIF05511.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 873
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G + R K VI ++ LE P +++ V +PT+ +
Sbjct: 739 LDQNGDVVDESRHKAVIKHLAHVLEDGRPTKIKTRRVPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A AD ++ A+I T +RA + +T S G
Sbjct: 799 TLLEFVALDTPGLLATVGATFADSGVHLHAAKITTIGERAEDLFIITSESGG 850
>gi|407366174|ref|ZP_11112706.1| PII uridylyl-transferase [Pseudomonas mandelii JR-1]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCTR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDP 174
+ DP
Sbjct: 866 QPLSDP 871
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD 83
++ A I++ G DVF + D + + + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSD 870
>gi|424047451|ref|ZP_17785010.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
gi|408883944|gb|EKM22707.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
Length = 874
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E D GLL+ + R F + +++ A+I+TIG + +D F +T G + + D +
Sbjct: 801 MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRLSEEQQDEL 860
Query: 392 RRQI 395
R ++
Sbjct: 861 REKL 864
>gi|398936503|ref|ZP_10667004.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
gi|398167815|gb|EJM55852.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPTRVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPTRVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|357510825|ref|XP_003625701.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
gi|355500716|gb|AES81919.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
Length = 405
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 152/372 (40%), Gaps = 58/372 (15%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
+ T+I V+ +K G+ + +++ +L I +A +S+DG W VF V+ ++K
Sbjct: 18 GETTIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVG------KEK 71
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGV---------MPTEEHTSIEFTGTDRPGLFSEVCA 135
+++RL + P+ S+ G + ++F DR GL +V
Sbjct: 72 TRWSLLKKRL---IAACPTCSSASGFSYFCSDLQNQKPPDVFLLKFCCKDRKGLLHDVTE 128
Query: 136 VLADLHCNVVNAEIWTHND-RAAAVVHVTD-----HSTGYAIKDPKRLSTIKELLFNV-- 187
VL +L + ++ T D + + +TD H+ ++L+T+ E F
Sbjct: 129 VLCELELTIKKVKVSTTPDGKVLDLFFITDTRELLHTEKRKDDTIEKLTTVLEDFFTTID 188
Query: 188 --LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL 245
L G + ++ S S P + +FD + +V V D + P
Sbjct: 189 IELVGPETTAFSQPSSSLPNAITD-------VFDLQSGTSTSDSVSIVMDNTLSPA---- 237
Query: 246 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG-RTEAYQEFYIRHVDGLP 304
+T++ + +D LL+DI+ TL D + +G + R + + +I VDG
Sbjct: 238 -----HTLVQIMCQDHKGLLYDIMRTLKDFNIQISYGRFSKKPRGKCEIDLFIMQVDGKK 292
Query: 305 ISSEAERE--------RVIQCLEAAIERRASEGLEL-----ELCTEDRVGLLSDITRIFR 351
I +++E +++ L A+ R + L EL + R + DIT +
Sbjct: 293 IVDPSKKESLSSRLKTELLRPLRVAVVSRGPDTQLLVANPVELSGKGRPLVFYDITLALK 352
Query: 352 ENSLSIKRAEIS 363
L I AE+
Sbjct: 353 MLGLCIFSAEVG 364
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 297
E + T+IT+ D+ L D+ + + V+T Y F++
Sbjct: 17 EGETTIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVGKEKTRWSL 76
Query: 298 ---RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
R + P S A C + ++ + L+ C +DR GLL D+T + E
Sbjct: 77 LKKRLIAACPTCSSASGFSYF-CSDLQ-NQKPPDVFLLKFCCKDRKGLLHDVTEVLCELE 134
Query: 355 LSIKRAEISTI-GGKVKDTFYVTD 377
L+IK+ ++ST GKV D F++TD
Sbjct: 135 LTIKKVKVSTTPDGKVLDLFFITD 158
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74
+V+DN T++++ + G+L +++ L D N+ I S G +D+F ++
Sbjct: 228 IVMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDFNIQISYGRFSKKPRGKCEIDLF-IM 286
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D + + RL+T+ P + V P + +E +G RP +F
Sbjct: 287 QVDGKKIVDPSKKESLSSRLKTEL-LRPLRVAVVSRGPDTQLLVANPVELSGKGRPLVFY 345
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV 162
++ L L + +AE+ H DR V V
Sbjct: 346 DITLALKMLGLCIFSAEVGRHVIGDRECEVYRV 378
>gi|269960589|ref|ZP_06174961.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
gi|269834666|gb|EEZ88753.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
Length = 874
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E D GLL+ + R F + +++ A+I+TIG + +D F +T G + + D +
Sbjct: 801 MEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGGRLSEEQQDEL 860
Query: 392 RRQI 395
R ++
Sbjct: 861 REKL 864
>gi|423690335|ref|ZP_17664855.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
gi|388002188|gb|EIK63517.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
Length = 900
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPEL 873
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQ 878
>gi|331006419|ref|ZP_08329722.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
gi|330419719|gb|EGG94082.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
Length = 905
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ + DR G L+ + RI E ++ + A+I+T+G +V+D F++TD GNP+ DP + +
Sbjct: 824 LEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITDADGNPLSDPALCEQ 883
Query: 391 IRRQIGHTKLQVKR 404
++ I T+L K
Sbjct: 884 LQHAIC-TQLDAKH 896
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMD 69
P V+I +++ T I + + K I +L+ NL I+ A I S G MD
Sbjct: 695 PLVIISDSSVLGEHAVTQIFIRADLKQNIFAATTTILDHFNLNIQSAQIHSATSSGHTMD 754
Query: 70 VFNVIDCDGKKI-RDKEVI------------------DYIQQRLETDAS-FAPSLRSSVG 109
F V+D D I ++ E++ D I++R+ F+ R+S+
Sbjct: 755 TFYVLDQDDLPIGQNPEIVTQIIDLLLEEFSIADKYSDIIKRRIPRQLKYFSAPTRTSIH 814
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ E+T +E DRPG + + +L + + +V A+I T +R + +TD + G
Sbjct: 815 NDISNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITD-ADGN 873
Query: 170 AIKDP 174
+ DP
Sbjct: 874 PLSDP 878
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y+ +I+R P R I N+ + TV++V S ++ G L ++ ++L + N+
Sbjct: 788 DKYSDIIKRRIPRQLKYFSAPTRTSIHNDISNEYTVLEVISPDRPGFLARLARILVEYNI 847
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET 96
+ A I++ G D+F + D DG + D + + +Q + T
Sbjct: 848 ELVTAKITTLGERVEDIFFITDADGNPLSDPALCEQLQHAICT 890
>gi|163797114|ref|ZP_02191069.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
gi|159177630|gb|EDP62183.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
Length = 945
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN TV++V+ ++ G+L ++ + L V + I A IS+ G F+DVF +
Sbjct: 852 PPRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVDVFYL 911
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K ++ I++ L
Sbjct: 912 KDVFGLKVDSKSKLEDIRRAL 932
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 33/218 (15%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + TD PGLFS + +A NVV+A I+T ++ A + A P R
Sbjct: 754 TEVTVYATDHPGLFSRISGAMAATGANVVDARIFTLSNGMALDTFLIQDEDRLAFDRPDR 813
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRV 233
++ + + L G KA + P + R R L +++ D+
Sbjct: 814 IAKLVSAIERALSGALRVDKALEA-RKPTLGGRTRALKIPPRVLIDN------------- 859
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+ VT +TV+ + +D P +L+ + L + + ++T
Sbjct: 860 -----KASVT-------HTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVD 907
Query: 294 EFYIRHVDGLPISSEAE----RERVIQCLEAAIERRAS 327
FY++ V GL + S+++ R +++ L AA ++A+
Sbjct: 908 VFYLKDVFGLKVDSKSKLEDIRRALMKALGAAEAKKAA 945
>gi|115480793|ref|NP_001063990.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|52076090|dbj|BAD46603.1| unknown protein [Oryza sativa Japonica Group]
gi|113632223|dbj|BAF25904.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|215700991|dbj|BAG92415.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G++ +++ L D N+ I + Y S +G +D+F V
Sbjct: 246 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLFAV- 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL T+ P + V P E +E +G RP +F
Sbjct: 305 QSDGKKIVDQHKQRALCCRLRTEL-HRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 363
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHV--TDHSTGYAIKDPKRLSTIKELLF 185
++ L LH + AEI H DR V VH+ DHS+ S I + +
Sbjct: 364 DITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSS--------LRSKIVDGVT 415
Query: 186 NVLRGYDD 193
N+L G+DD
Sbjct: 416 NMLMGWDD 423
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD 377
DR+GLL D+TR+ E L+I+R ++ST G+V D F++TD
Sbjct: 132 DRMGLLHDVTRVLCELELTIRRVKVSTTPDGRVLDLFFITD 172
>gi|365895650|ref|ZP_09433753.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
gi|365423576|emb|CCE06295.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
Length = 930
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 904 APTRQAAIKSTLLHLL 919
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 78/202 (38%), Gaps = 26/202 (12%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+VG P T + D P L S + A N+V+A+I+T D A
Sbjct: 728 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 787
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
+ +R + I E + VL G K L P + R R Q
Sbjct: 788 YERDEDEARRATRIGETIEQVLEG-------KLKL-PDAVARRTTRGKQ----------- 828
Query: 227 EKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 285
KA S P+VT+ N + YTVI + DRP LL+++ ++ + + V
Sbjct: 829 HKAF------SVEPEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVA 882
Query: 286 TGRTEAYQEFYIRHVDGLPISS 307
T A FY+ + G IS+
Sbjct: 883 TFGERARDVFYVTDLLGAQISA 904
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVTDLLGAQI 902
>gi|328545863|ref|YP_004305972.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
gi|326415603|gb|ADZ72666.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
Length = 942
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 11 RMNPPRV---VIDNNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
RM RV VI NN+ +D TVI+V +++ G+L + + + +NL I A+IS+ G
Sbjct: 834 RMKAFRVASDVIVNNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGER 893
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
+DVF V D G+KI + D I++RL P S VM T
Sbjct: 894 VVDVFYVTDLTGQKIANVGRQDVIRERLRDAVEGRPEAGSGALVMQT 940
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL D+TR +L+I A IST G +V D FYVTD+TG +
Sbjct: 857 IEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDLTGQKI 908
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE TG DRPGL ++ +A L+ N+ +A I T +R V +VTD TG I
Sbjct: 851 SDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTD-LTGQKIA 909
Query: 173 DPKRLSTIKELLFNVLRG 190
+ R I+E L + + G
Sbjct: 910 NVGRQDVIRERLRDAVEG 927
>gi|398873974|ref|ZP_10629217.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
gi|398197674|gb|EJM84649.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
Length = 900
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|365540549|ref|ZP_09365724.1| PII uridylyl-transferase [Vibrio ordalii ATCC 33509]
Length = 874
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L++ +P P +++ T + V + ++ + V+ L+ NL + A I SS
Sbjct: 670 LLKHSDPSQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKIRDKE---VIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G I ++ +I ++ L T LR + V
Sbjct: 730 GYVLDTFMVLDQNGHAIDEESHPSLIKHLLNGLYTGWQNKLKLRRTPRNLQHFKVKTKVD 789
Query: 110 VMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 790 FLPTKSNKRTLMEFVALDTPGLLATVGATFADLNINLHGAKITTIGERAEDLFILTGSQG 849
Query: 168 GYAIKDPKRLSTIKELL 184
G ++ + T++E+L
Sbjct: 850 GKLSEEEE--CTLREIL 864
>gi|312959390|ref|ZP_07773907.1| uridylyltransferase [Pseudomonas fluorescens WH6]
gi|311286107|gb|EFQ64671.1| uridylyltransferase [Pseudomonas fluorescens WH6]
Length = 900
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPEL 873
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCLRLQEAIVQQL 885
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 33/227 (14%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCT 336
F+I D P+S R+ + + + G+EL T
Sbjct: 853 RVEDVFFITDADNQPLSDPELCLRLQEAIVQQLSVTQEPGVELTRLT 899
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQE 879
>gi|398881660|ref|ZP_10636645.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
gi|398200795|gb|EJM87697.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
Length = 216
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 133 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 192
Query: 387 IIDSIRRQIG 396
+ D+I Q+
Sbjct: 193 LQDAIVEQLS 202
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 14 PPRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMD 69
PP V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 4 PPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLD 63
Query: 70 VFNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSS 107
+ V+D DG I D E + DY IQ+R+ +FAP + +
Sbjct: 64 TYIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--T 121
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 122 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 180
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 181 NQPLSDPLLCSRLQDAIVEQL 201
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 18 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 77
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 78 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 116
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 117 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 168
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 169 RVEDVFFITDANNQPLS 185
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 97 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 156
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 157 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 194
>gi|384920430|ref|ZP_10020438.1| PII uridylyl-transferase [Citreicella sp. 357]
gi|384465698|gb|EIE50235.1| PII uridylyl-transferase [Citreicella sp. 357]
Length = 920
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 108 VGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
+ + P E+ T + F +D PG+F+ + L+ + NVV+A +T D A V
Sbjct: 718 IDIHPDEDRDATRVCFALSDHPGIFARLAGALSLVGANVVDARTFTSKDGFATAVFWIQD 777
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
G ++ RL +++++ L G R+A I +R R +++
Sbjct: 778 MDGTPFEE-SRLPRLRDMIRKTLWGEVKPREA--------IHSRLR-----------FKK 817
Query: 226 VEKAVGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
E+A S P + E YT+I + ++DRP LL+D+ TL++ + +
Sbjct: 818 RERAF-------SVPTSITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAV 870
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
+ T + FY++ + GL + ++++ + L AIE
Sbjct: 871 IATYGEQVVDTFYVKDMFGLKFFTPSKQKTLEHRLRDAIE 910
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR E+++ I A I+T G +V DTFYV D+ G
Sbjct: 841 IEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYVKDMFG 889
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L++ N+ I A I++ G +D F V
Sbjct: 825 PTSITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYV 884
Query: 74 IDCDGKKI 81
D G K
Sbjct: 885 KDMFGLKF 892
>gi|395648131|ref|ZP_10435981.1| PII uridylyl-transferase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 900
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ + IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 391 IRRQIGHTKLQVKRSTILAP 410
++ I +L V + + + P
Sbjct: 877 LQEAIVQ-QLSVNQESGVEP 895
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
>gi|424039494|ref|ZP_17777859.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
gi|408892923|gb|EKM30271.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
Length = 874
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|359483143|ref|XP_003632910.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
gi|298204773|emb|CBI25271.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ +AT++++ ++ G LL + L ++ L + KA + D + F +
Sbjct: 85 PKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAIT 144
Query: 75 DCD-GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ + ++S ++ + G+ P ++ H S
Sbjct: 145 KADTGRKVEDPELLEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPKQQVDVDIATHIS 204
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ G DRPGL ++ + D++ +V + E T A A HV+ G
Sbjct: 205 VNDDGPDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVS--YRG 262
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
AI P ++++L N LR +
Sbjct: 263 KAIIKP-----LQQVLGNSLRYF 280
>gi|262276529|ref|ZP_06054338.1| [Protein-PII] uridylyltransferase [Grimontia hollisae CIP 101886]
gi|262220337|gb|EEY71653.1| [Protein-PII] uridylyltransferase [Grimontia hollisae CIP 101886]
Length = 873
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I N T I V S +K + +V+ L+ NL + A I +S G+ +D F V
Sbjct: 680 PLVLISKNATRGGTEIFVYSEDKPSLFARVVAALDKRNLSVHDAQIMTSKDGFALDTFMV 739
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASF------AP------SLRSSVGVMPTE--EH 116
+D + + I R + + + + L + + AP +++ V +PT
Sbjct: 740 LDANNEAIQPDRHDRIRESVAEALMQEGAITIPVKRAPRKLMAFKVKTQVNFLPTRIGRR 799
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E D PGL ++V AV A ++ A+I T +RA VTD A+ D +
Sbjct: 800 TLLELIALDTPGLLAKVGAVFAREGVSLQAAKITTIGERAEDFFIVTD-GERQALTDEAQ 858
Query: 177 LSTIKELLFNVL 188
+++K LF+ L
Sbjct: 859 -TSLKNALFDAL 869
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 111/282 (39%), Gaps = 47/282 (16%)
Query: 133 VCAVLADLHCNVVNAEIWTHNDRA--AAVVHVTDHSTGYAIKDP----KRLSTIKELLFN 186
VC +AD+ N N E+W R A + + T + +++P +R+ ++L
Sbjct: 576 VCLTVADI--NATNPELWNSWKRTLLAELYYSTQKALRRGLENPPDIRERIRHNQQLASA 633
Query: 187 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL- 245
+LR K SP I +R F ++++ + + + ++
Sbjct: 634 LLR--------KNGHSPREITLLWQRFKADYFLRHTHKQIAWHSENILSHEGKDPLVLIS 685
Query: 246 -NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGL 303
N + T I + S+D+P L +V L V + T + A F + +
Sbjct: 686 KNATRGGTEIFVYSEDKPSLFARVVAALDKRNLSVHDAQIMTSKDGFALDTFMVLDANNE 745
Query: 304 PISSEAE---RERVIQCL--EAAIE---RRASEGLE--------------------LELC 335
I + RE V + L E AI +RA L LEL
Sbjct: 746 AIQPDRHDRIRESVAEALMQEGAITIPVKRAPRKLMAFKVKTQVNFLPTRIGRRTLLELI 805
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
D GLL+ + +F +S++ A+I+TIG + +D F VTD
Sbjct: 806 ALDTPGLLAKVGAVFAREGVSLQAAKITTIGERAEDFFIVTD 847
>gi|255263503|ref|ZP_05342845.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
gi|255105838|gb|EET48512.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
Length = 921
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 37/210 (17%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND---RAAAVVHVTDHSTGYAIKDPKRL 177
F D PG+F + LA + NVV+A +T D AA + +D T Y D RL
Sbjct: 736 FALVDHPGIFGRITGALALVGANVVDARTYTSKDGYVTAAFWIQDSD-DTPY---DEDRL 791
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVE 234
+++++ L G R A T I RER I FD+ E
Sbjct: 792 PRLRKMIERTLAGDILPRDALTDRDK--IKKRERAFKVPTHITFDNDGSEI--------- 840
Query: 235 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
YT+I + ++DRP LLFD+ +L + + ++ T +
Sbjct: 841 ----------------YTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDT 884
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIER 324
FY++ + GL SE++++ + + L AIE+
Sbjct: 885 FYVKDMFGLKFYSESKQKTLERKLRDAIEQ 914
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYVKDMFG 892
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 828 PTHITFDNDGSEIYTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYV 887
Query: 74 IDCDG--------KKIRDKEVIDYIQQRLE 95
D G +K ++++ D I+Q +E
Sbjct: 888 KDMFGLKFYSESKQKTLERKLRDAIEQGVE 917
>gi|126739156|ref|ZP_01754850.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
gi|126719773|gb|EBA16481.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
Length = 913
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 42/249 (16%)
Query: 87 IDYIQQRLETDASFAPSLRSSVGVM----PTEEH--TSIEFTGTDRPGLFSEVCAVLADL 140
ID+ + E DA P GV+ P E+ T FT D PG+F+ V LA +
Sbjct: 693 IDFAEMLRELDAKNDPG-----GVVIRLDPDEDRDATRACFTMWDHPGIFARVSGALALV 747
Query: 141 HCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTS 200
NVV+A +T D + G+ + RL + +++ L+G R A S
Sbjct: 748 GANVVDARSYTTKDGYVTDAFWIQDAEGHPF-EASRLKRLSQMIRKTLKGEVIARDALVS 806
Query: 201 LSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMR 257
I RE+ I FD+ E YT+I +
Sbjct: 807 RDK--IKKREKAFRVPTHITFDNEGSE-------------------------IYTIIEVD 839
Query: 258 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 317
++DRP LL+D+ +L + + ++ T + FY++ + GL S ++++ + +
Sbjct: 840 TRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDMFGLKYHSLSKQKTLEKR 899
Query: 318 LEAAIERRA 326
L AI A
Sbjct: 900 LREAISEGA 908
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V DTFYV D+ G
Sbjct: 836 IEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDMFG 884
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 820 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K +++RL
Sbjct: 880 KDMFGLKYHSLSKQKTLEKRL 900
>gi|260775287|ref|ZP_05884184.1| [Protein-PII] uridylyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608468|gb|EEX34633.1| [Protein-PII] uridylyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 873
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSRDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G+ + R K VI ++ L+ P +++ V +PT+ +
Sbjct: 739 LDQHGQAVHESRHKAVIKHLAHVLKDGRPTKIKTRRVPRNLQHFKVKTRVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADL ++ A+I T +RA + +T G
Sbjct: 799 TLMEFVALDTPGLLATVGATFADLDLHLHAAKITTIGERAEDLFIITSEQGG 850
>gi|224110036|ref|XP_002315393.1| predicted protein [Populus trichocarpa]
gi|222864433|gb|EEF01564.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID + DATV++V ++ G LL + L ++ L + KA + D + F++
Sbjct: 74 PKVIIDQDADPDATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSIT 133
Query: 75 DCD-GKKIRDKEVIDYI---------QQRLETDASFAPSLRSSVGVMPTEE--------- 115
G+K+ D E+++ I Q E+ + A + + GV P ++
Sbjct: 134 KASTGRKVDDPELLEAIRLTIINNLLQYHPESSSQLAMGI--AFGVEPPKQVDVDIATRV 191
Query: 116 -------HTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
S+ F DRPGL ++ + D++ V + E T A A HV+
Sbjct: 192 KVKEDSPDRSLLFVEAADRPGLLVDLVKAITDINIAVESGEFDTEGLLAKAKFHVS--YK 249
Query: 168 GYAIKDPKRLSTIKELLFNVLRGY 191
G AI P +L +L N LR +
Sbjct: 250 GKAISKPLQL-----VLANSLRYF 268
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 23/186 (12%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + L +L NVV A ++ + +T STG + DP
Sbjct: 85 DATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSITKASTGRKVDDP 144
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG-RV 233
+ L I+ + N L Y ++ ++ I F ++V+ + RV
Sbjct: 145 ELLEAIRLTIINNLLQYHPESSSQLAMG-------------IAFGVEPPKQVDVDIATRV 191
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+ K P ++L +E + DRP LL D+V +TD+ V G +T A
Sbjct: 192 KVKEDSPDRSLLFVE---------AADRPGLLVDLVKAITDINIAVESGEFDTEGLLAKA 242
Query: 294 EFYIRH 299
+F++ +
Sbjct: 243 KFHVSY 248
>gi|357145299|ref|XP_003573594.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 281
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT+++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 75 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 134
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
G+KI D E+++ ++ + ET + A + ++ G+ P E ++
Sbjct: 135 KSSTGRKIDDPELLEAVRLTIINNMLEYHPETSSQLA--MGATFGIEPPTEVVDVDIATH 192
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++AD++ V + E T A A HV+
Sbjct: 193 IDIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS--- 249
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 250 ----YRGKPLIKALQQVLANSLRYF 270
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 34/192 (17%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + + L +L NVV A + + +T STG I DP
Sbjct: 86 DATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAITKSSTGRKIDDP 145
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLS-------PPGIMNRERRLHQIMFDDRDYERVE 227
+ L ++ + N + Y ++ ++ P +++ + H ++DD
Sbjct: 146 ELLEAVRLTIINNMLEYHPETSSQLAMGATFGIEPPTEVVDVDIATHIDIYDD------- 198
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
P+ ++L +E S DRP LL D+V + D+ V G +T
Sbjct: 199 -----------GPERSLLVVE---------SADRPGLLVDLVKIIADINITVQSGEFDTE 238
Query: 288 RTEAYQEFYIRH 299
A +F++ +
Sbjct: 239 GLLAKAKFHVSY 250
>gi|424033774|ref|ZP_17773185.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
gi|408873887|gb|EKM13070.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
Length = 874
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|254417899|ref|ZP_05031623.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
gi|196184076|gb|EDX79052.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
Length = 900
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDG------K 79
AT I + + ++ G+ + Q + + + A +++ G +DVF V D G +
Sbjct: 677 ATEISIAAADRPGLFADLAQTMAALGADVTDARVATTSEGVVLDVFRVQDGAGLPYGQAE 736
Query: 80 KIRDKEVIDYIQQ--RLETDASFAPS-----LRSSVGVMP--------TEEHTSIEFTGT 124
R K ++D +++ R E S AP+ +++ V P +E T +E +G
Sbjct: 737 PRRLKALVDALEKAARGEGRISKAPAPAGNARKAAFEVRPVVMVDHHASETATVVEVSGA 796
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL + + V +D N+ +A + ++ +RA +V D G I +R++ ++ L
Sbjct: 797 DRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVD-GKGRKITSEQRIAELRTAL 855
Query: 185 FNVL 188
VL
Sbjct: 856 EAVL 859
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 31/240 (12%)
Query: 90 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 149
+Q+ +T A+ + + V +P + T I DRPGLF+++ +A L +V +A +
Sbjct: 652 VQRARQTGAAAQAAPLTPVEGLPVQA-TEISIAAADRPGLFADLAQTMAALGADVTDARV 710
Query: 150 WTHNDRAAAVVHVTDHSTG--YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
T ++ V G Y +P+RL + + L RG + + S +P
Sbjct: 711 ATTSEGVVLDVFRVQDGAGLPYGQAEPRRLKALVDALEKAARG-----EGRISKAPAPAG 765
Query: 208 NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLF 266
N + ++ RP V V + + TV+ + DRP LL
Sbjct: 766 NARKAAFEV----------------------RPVVMVDHHASETATVVEVSGADRPGLLA 803
Query: 267 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+ +D + V + A FY+ G I+SE + LEA ++ RA
Sbjct: 804 ALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDGKGRKITSEQRIAELRTALEAVLDSRA 863
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++D++ ATV++V ++ G+L + +V +D L I+ A+++S G +D F V+
Sbjct: 776 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 835
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ I ++ LE
Sbjct: 836 DGKGRKITSEQRIAELRTALEA 857
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 33/177 (18%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE-FYIR 298
P V + T I++ + DRP L D+ T+ + V V T + F ++
Sbjct: 666 PLTPVEGLPVQATEISIAAADRPGLFADLAQTMAALGADVTDARVATTSEGVVLDVFRVQ 725
Query: 299 HVDGLPISSEAER--ERVIQCLEAA-----------------------------IERRAS 327
GLP R + ++ LE A ++ AS
Sbjct: 726 DGAGLPYGQAEPRRLKALVDALEKAARGEGRISKAPAPAGNARKAAFEVRPVVMVDHHAS 785
Query: 328 E-GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
E +E+ DR GLL+ ++R+F + L+I+ A +++ G + D+FYV D G +
Sbjct: 786 ETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDGKGRKI 842
>gi|326503086|dbj|BAJ99168.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505920|dbj|BAJ91199.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT+++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 72 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 131
Query: 75 DCD-GKKIRDKEVID-----YIQQRLE--TDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
G+KI D E+++ I LE +AS ++ ++ G+ P E ++
Sbjct: 132 KSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIE 191
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL ++ ++AD++ V + E T A A HV+
Sbjct: 192 IYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS----- 246
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 247 --YRGKPLIKALQQVLANSLRYF 267
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 34/192 (17%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + + L +L NVV A + + +T STG I DP
Sbjct: 83 DATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAITKSSTGRKIDDP 142
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTS------LSPPG-IMNRERRLHQIMFDDRDYERVE 227
+ L ++ + N + Y ++ + L PP +++ + H ++DD
Sbjct: 143 ELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIYDD------- 195
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
P+ ++L +E S DRP LL D+V + D+ V G +T
Sbjct: 196 -----------GPERSLLVVE---------SADRPGLLVDLVKIIADINITVQSGEFDTE 235
Query: 288 RTEAYQEFYIRH 299
A +F++ +
Sbjct: 236 GLLAKAKFHVSY 247
>gi|408373493|ref|ZP_11171189.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
gi|407766661|gb|EKF75102.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
Length = 887
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ T DR GLL+ I RIF L ++ A I+T+G K +D F++TD+ G PV DP +
Sbjct: 812 VDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFITDLNGEPVSDPALCQQ 871
Query: 391 IRRQI 395
+++ +
Sbjct: 872 LQQTL 876
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVVI N+ D T + + ++++ G+L + ++ L+++ A I++ G DVF +
Sbjct: 796 PTRVVISNDLTNDRTAVDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFI 855
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D +G+ + D + +QQ L
Sbjct: 856 TDLNGEPVSDPALCQQLQQTL 876
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 27/207 (13%)
Query: 8 LIRRMNP--PRVVI---DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YIS 61
L++R P P V+I + A + I + + + + + L+ + L I A I+
Sbjct: 675 LLQRDTPDDPLVLIRESSQSVLAGGSQIFIYTPDTRNLFSATVNALDSLGLTIMDARIIT 734
Query: 62 SDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDASFAPSLRSSVGV-MP------- 112
S G+ +D + V+D G I D I+ I++ L ++V MP
Sbjct: 735 SADGFSLDTYIVLDEHGTPIGEDLARIEQIRKTLTETLKHPERFATTVSRRMPRRNKHFD 794
Query: 113 -----------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
T + T+++ DRPGL + + + V NA I T ++A V
Sbjct: 795 VPTRVVISNDLTNDRTAVDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFF 854
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVL 188
+TD + G + DP +++ L L
Sbjct: 855 ITDLN-GEPVSDPALCQQLQQTLIQEL 880
>gi|408483321|ref|ZP_11189540.1| PII uridylyl-transferase [Pseudomonas sp. R81]
Length = 356
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 273 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPEL 329
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 145 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 204
Query: 71 FNVIDCDG----------KKIRD---------KEVIDYIQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ E IQ+R+ +FAP + S+
Sbjct: 205 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFAPQVTISN 264
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 265 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 320
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 321 NQPLSDPELCLRLQEAIVQQL 341
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 237 DEYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 296
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 297 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQE 335
>gi|126732334|ref|ZP_01748134.1| PII uridylyl-transferase [Sagittula stellata E-37]
gi|126707203|gb|EBA06269.1| PII uridylyl-transferase [Sagittula stellata E-37]
Length = 896
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 43/219 (19%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD--- 173
T + F D PG+FS + LA NVV+A +T D A V + G +D
Sbjct: 707 TRVCFALQDHPGIFSRLTGALALSGANVVDARTFTTRDGYATAVFWIQDADGAPYEDVRI 766
Query: 174 PKRLSTIKELLFN------VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVE 227
P+ TI++ L ++ D ++K + + P I FD+ E
Sbjct: 767 PRLRETIRKTLTGEVVAREAVKSRDKYKKRERAFKVPT---------HITFDNEGSE--- 814
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
+T+I + ++DRP LL+D+ L + ++ T
Sbjct: 815 ----------------------IFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIATY 852
Query: 288 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+ FY++ + GL + S+ +R+ + + L A++ A
Sbjct: 853 GEQVVDTFYVKDMFGLKLHSKTKRDLIEKKLRLAMQEGA 891
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 3 DEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+Y K R P + DN T+I+VD+ ++ +L + +VL N+ I A I+
Sbjct: 791 DKYKKRERAFKVPTHITFDNEGSEIFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIA 850
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+ G +D F V D G K+ K D I+++L
Sbjct: 851 TYGEQVVDTFYVKDMFGLKLHSKTKRDLIEKKL 883
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
+E+ T DR LL D+ R+ ++ I A I+T G +V DTFYV D+ G + K
Sbjct: 819 IEVDTRDRPSLLYDLARVLASQNIYIASAVIATYGEQVVDTFYVKDMFGLKLHSK 873
>gi|398864639|ref|ZP_10620171.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
gi|398244757|gb|EJN30296.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ + IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|381152286|ref|ZP_09864155.1| (protein-PII) uridylyltransferase [Methylomicrobium album BG8]
gi|380884258|gb|EIC30135.1| (protein-PII) uridylyltransferase [Methylomicrobium album BG8]
Length = 876
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+EL T DR GLLS I R F + +++ A+I+TIG + +D FYVTD P+ D +
Sbjct: 806 IELITTDRAGLLSKIGRAFLKQHINLHNAKITTIGSRAEDMFYVTDSALRPITDAETQKK 865
Query: 391 IRRQI 395
+R +I
Sbjct: 866 LREEI 870
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T IE TDR GL S++ H N+ NA+I T RA + +VTD S I
Sbjct: 799 PLSHCTIIELITTDRAGLLSKIGRAFLKQHINLHNAKITTIGSRAEDMFYVTD-SALRPI 857
Query: 172 KDPKRLSTIKELLFNVLRG 190
D + ++E + + L G
Sbjct: 858 TDAETQKKLREEIVSALGG 876
>gi|226945943|ref|YP_002801016.1| PII uridylyl-transferase [Azotobacter vinelandii DJ]
gi|548353|sp|P36223.1|GLND_AZOVI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492000|sp|C1DSU8.1|GLND_AZOVD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|39257|emb|CAA42173.1| uridylyl transferase [Azotobacter vinelandii]
gi|226720870|gb|ACO80041.1| protein-P-II uridylyltransferase [Azotobacter vinelandii DJ]
Length = 899
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ I +IF + LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTDAHNQPLSDPELCAR 876
Query: 391 IRRQI------GHTKLQVKRSTI 407
++ I G + +Q R +I
Sbjct: 877 LQLAIAEQLADGDSYIQPSRISI 899
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + AT I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV-----------IDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG I R +E+ DY IQ+R+ +FAP + +
Sbjct: 749 YIVLDADGGSIGNNPARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ P T +E DRPGL + + + D ++ NA+I T +R V VTD +
Sbjct: 809 DALRPV---TILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTD-AH 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ D +L
Sbjct: 782 DYPTIIQRRVPRQLKHFAFAPQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLS 841
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ-----QRLETDASFAPS 103
++ A I++ G DVF V D + + D E+ +Q Q + D+ PS
Sbjct: 842 LQNAKIATLGERVEDVFFVTDAHNQPLSDPELCARLQLAIAEQLADGDSYIQPS 895
>gi|384247953|gb|EIE21438.1| hypothetical protein COCSUDRAFT_53990 [Coccomyxa subellipsoidea
C-169]
Length = 290
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IEF DR G + A L +L N+ A+I A ++TD T I RL
Sbjct: 93 TIEFG--DRLGQLLDTIAALKNLKLNIRRAKIKA--GAGANKFYITDALTSEKILKSARL 148
Query: 178 STIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
I+ +FN L Y A S SP + LH + RD +++ +V
Sbjct: 149 EEIRLTIFNNLLKYHPESGAAIGWGASASP---VTEADPLHPL--GTRDTPKIKTSVEVS 203
Query: 234 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
E++S ++ +++R++DRP LL DIV TL D+ V V+T A
Sbjct: 204 EEESG-----------THSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKD 252
Query: 294 EFYIRHVDGLPIS 306
EFY+ + G P++
Sbjct: 253 EFYVTY-HGEPLN 264
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN ATV+ ++ ++ G LL I L ++ L I++A I + G + F +
Sbjct: 77 PIVKIDNQHDPFATVVTIEFGDRLGQLLDTIAALKNLKLNIRRAKIKAGAG--ANKFYIT 134
Query: 75 DC-DGKKIRDKEVIDYIQQRL---------ETDASFA----------------------P 102
D +KI ++ I+ + E+ A+ P
Sbjct: 135 DALTSEKILKSARLEEIRLTIFNNLLKYHPESGAAIGWGASASPVTEADPLHPLGTRDTP 194
Query: 103 SLRSSVGVMPTEE--HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
+++SV V E H+ + DRPGL +++ L D+ NV++AE+ T A
Sbjct: 195 KIKTSVEVSEEESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEF 254
Query: 161 HVTDHS 166
+VT H
Sbjct: 255 YVTYHG 260
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
T DR GLL+DI ++ S+++ AE+ T G KD FYVT G P++P +
Sbjct: 217 TRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEFYVT-YHGEPLNPSM 267
>gi|426407999|ref|YP_007028098.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
gi|426266216|gb|AFY18293.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|398957202|ref|ZP_10677152.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
gi|398148649|gb|EJM37319.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|220921155|ref|YP_002496456.1| PII uridylyl-transferase [Methylobacterium nodulans ORS 2060]
gi|219945761|gb|ACL56153.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium nodulans ORS
2060]
Length = 1029
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E +G DRPGL E+ L+ L+ N+ +A + T +R V +VTD TG I
Sbjct: 929 SSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVTD-LTGTKIT 987
Query: 173 DPKRLSTIKELLFNVLRG 190
P R +TI+ + V G
Sbjct: 988 QPDRQATIRRAVMGVFEG 1005
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL ++T +L+I A ++T G +V D FYVTD+TG + P +
Sbjct: 935 LEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVTDLTGTKITQPDRQAT 994
Query: 391 IRRQI 395
IRR +
Sbjct: 995 IRRAV 999
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + IDN + TV+++ +++ G+L ++ L+ +NL I A++++ G +DVF V
Sbjct: 920 PDLSIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVT 979
Query: 75 DCDGKKI 81
D G KI
Sbjct: 980 DLTGTKI 986
>gi|398851998|ref|ZP_10608670.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
gi|398245286|gb|EJN30809.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
Length = 900
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D +G+ I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDNEGESIGDNPTRVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPTRVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I P+S
Sbjct: 853 RVEDVFFITDAHNQPLS 869
>gi|398984036|ref|ZP_10690345.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
gi|399011339|ref|ZP_10713671.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398118081|gb|EJM07821.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398156153|gb|EJM44577.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
Length = 900
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D +G+ I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDNEGESIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESIGD 761
Query: 174 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 230
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 290 EAYQEFYIRHVDGLPIS 306
F+I P+S
Sbjct: 853 RVEDVFFITDAHNQPLS 869
>gi|117928771|ref|YP_873322.1| PII uridylyl-transferase [Acidothermus cellulolyticus 11B]
gi|117649234|gb|ABK53336.1| metal dependent phosphohydrolase [Acidothermus cellulolyticus 11B]
Length = 771
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 333 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIR 392
E+ DR GLL I RI ++ L ++ A++ T+G D FYVTD G P+ + +R
Sbjct: 700 EVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVTDTAGKPLSEAAAEEVR 759
Query: 393 RQIGHTKLQVKR 404
R + L +R
Sbjct: 760 RALETALLDGRR 771
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP VV+ ADATV +V + ++ G+L + ++L+D L ++ A + + G +DVF V
Sbjct: 683 PPPVVLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYV 742
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D GK + + + +++ LET
Sbjct: 743 TDTAGKPL-SEAAAEEVRRALET 764
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 77/201 (38%), Gaps = 37/201 (18%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLSTIKEL 183
D+PGL VLA LH V A T D A V V D Y + DP RL +E
Sbjct: 600 DQPGLLWRSAGVLA-LHRLGVRAARATSIDSTA--VTVFDVEPEYLAEIDPDRL---RED 653
Query: 184 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 243
L L G D A ++ G + + + P
Sbjct: 654 LRRALDGSLDLSAALA---------------------------RRSAGAAQRQPAAPPPV 686
Query: 244 VL--NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
VL D TV +R+ DRP LLF I L+D V V T +A FY+
Sbjct: 687 VLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVTDTA 746
Query: 302 GLPISSEAERERVIQCLEAAI 322
G P+ SEA E V + LE A+
Sbjct: 747 GKPL-SEAAAEEVRRALETAL 766
>gi|83953368|ref|ZP_00962090.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
gi|83842336|gb|EAP81504.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
Length = 927
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 742 FVMADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAEGNPY-DVSRLPRL 800
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L+G R A S + RE+ I FD+ E
Sbjct: 801 RQMISKTLKGEILARDALKSRDK--VKKREKVFKVPTHITFDNEGSE------------- 845
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ +L++ + + ++ T + FY+
Sbjct: 846 ------------IYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
+ + GL +E++++ + + L AAI
Sbjct: 894 KDMFGLKYYTESKQKTLEKRLRAAI 918
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR E+++ I A I+T G +V DTFYV D+ G
Sbjct: 850 IEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFG 898
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L++ N+ I A I++ G +D F V
Sbjct: 834 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K + +++RL
Sbjct: 894 KDMFGLKYYTESKQKTLEKRL 914
>gi|388258218|ref|ZP_10135396.1| PII uridylyl-transferase [Cellvibrio sp. BR]
gi|387938339|gb|EIK44892.1| PII uridylyl-transferase [Cellvibrio sp. BR]
Length = 928
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 24/175 (13%)
Query: 15 PRVVIDNNTC---ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
P ++I T A AT I V S N+ + + L+ +NL I+ A I SS G+ +D
Sbjct: 725 PLILIKKTTSKELAGATQIFVYSKNQKNVFVAAATALSLLNLSIQDAKIYSSKSGYTIDT 784
Query: 71 FNVIDCDGKKIRDKE-VIDYIQQRLETDASFAPSLRSSVG----------VMPTEEHTS- 118
F V++ +G+ + + + ++ IQQ L + S + R +G PT S
Sbjct: 785 FFVLNENGEPLGNNQTLLKKIQQGLMEELSLVDNYRDVIGRRTPRRLKYFASPTRTSLST 844
Query: 119 --------IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
+E DRPGL + + + D ++NA+I T +R + + D+
Sbjct: 845 DTIRNCSVLEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIADN 899
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ + DR GLL+ I RIF + + + A+I+T+G +V+D F++ D G P+ D + +
Sbjct: 853 LEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIADNDGKPLGDVALCEK 912
Query: 391 IRRQI 395
++++I
Sbjct: 913 LQQEI 917
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+P R + +T + +V++V S ++ G+L + ++ D ++ + A I++ G D+F
Sbjct: 836 SPTRTSLSTDTIRNCSVLEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFF 895
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
+ D DGK + D + + +QQ +
Sbjct: 896 IADNDGKPLGDVALCEKLQQEI 917
>gi|398965080|ref|ZP_10680746.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
gi|398147534|gb|EJM36238.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
Length = 900
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDNDGESIGDNPTRIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|83944326|ref|ZP_00956781.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
gi|83844870|gb|EAP82752.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
Length = 927
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 742 FVMADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAEGNPY-DVSRLPRL 800
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L+G R A S + RE+ I FD+ E
Sbjct: 801 RQMISKTLKGEILARDALKSRDK--VKKREKVFKVPTHITFDNEGSE------------- 845
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ +L++ + + ++ T + FY+
Sbjct: 846 ------------IYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
+ + GL +E++++ + + L AAI
Sbjct: 894 KDMFGLKYYTESKQKTLEKRLRAAI 918
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR E+++ I A I+T G +V DTFYV D+ G
Sbjct: 850 IEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFG 898
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L++ N+ I A I++ G +D F V
Sbjct: 834 PTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K + +++RL
Sbjct: 894 KDMFGLKYYTESKQKTLEKRL 914
>gi|75674332|ref|YP_316753.1| PII uridylyl-transferase [Nitrobacter winogradskyi Nb-255]
gi|91206747|sp|Q3SWE0.1|GLND_NITWN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74419202|gb|ABA03401.1| Protein-P-II uridylyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 925
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 902
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 903 APTRQAAIKRALVHLL 918
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 10 RRMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
+R+ P P+V I+N T+I+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 KRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGE 885
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 RARDVFYVTDLLGARI 901
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 77/204 (37%), Gaps = 29/204 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 738 TELTILAADHPWLLSIIAGACASAGANIVDAQIYTTTDGQALDTIAISREYERDEDEGRR 797
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG-RVED 235
+ I E++ VL G L P +M +A G R+
Sbjct: 798 AARIAEIIEQVLEG---------RLRLPDVMP------------------SRAAGKRLRP 830
Query: 236 KSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P+VT+ N D +T+I + DRP LLF + ++ + + V T A
Sbjct: 831 FVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDV 890
Query: 295 FYIRHVDGLPISSEAERERVIQCL 318
FY+ + G I++ + + + L
Sbjct: 891 FYVTDLLGARITAPTRQAAIKRAL 914
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 850 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTRQAA 909
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 910 IKRALVH 916
>gi|389683284|ref|ZP_10174616.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
gi|388552797|gb|EIM16058.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
Length = 900
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD + DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQQLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQDAI 881
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG K+IRD + DY IQ+R+ FA + ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNQQ 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
+ DP+ S +++ + L S PP + R
Sbjct: 868 LSDPQLCSRLQDAIVEQL---------SVSHEPPTALTR 897
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + +++ D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQQLSDPQLCSRLQ 878
>gi|260431485|ref|ZP_05785456.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415313|gb|EEX08572.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 939
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 47/253 (18%)
Query: 94 LETDASFAPSLRS----------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLH 141
L+T FA LR+ + + P E+ T F D PG+F+ + LA
Sbjct: 715 LDTHVEFAKMLRALEHSGDPGEMEIHLHPDEDRDATRACFAMADHPGIFARIAGALALAG 774
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
NVV+A +T D + G+ + RL +K+++ L+G R A +
Sbjct: 775 ANVVDARSYTTKDGYVTDAFWIQDADGHPF-EAARLPRLKQMIHKTLKGEVVARDALKTR 833
Query: 202 SPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRS 258
I RE+ + I FD+ E YT+I + +
Sbjct: 834 DK--IKKREKAFNVPTHITFDNDGSE-------------------------IYTIIEVDT 866
Query: 259 KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+DRP LL+D+ TL + + ++ T + FY++ + GL SE+++ + L
Sbjct: 867 RDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFGLKYYSESKQ----RTL 922
Query: 319 EAAIERRASEGLE 331
EA + + +EG E
Sbjct: 923 EAKLRKAIAEGAE 935
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V DTFYV D+ G
Sbjct: 862 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFG 910
>gi|39996919|ref|NP_952870.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|409912341|ref|YP_006890806.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
gi|39983807|gb|AAR35197.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|298505932|gb|ADI84655.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
Length = 902
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T ++ + + G+ I + R S + E L
Sbjct: 723 DIPGLFSMITGVMAANGINILGAQIHTSSNGKVLDILQVNSPQGFMIIEESRWSRVDEDL 782
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
VL G R A + R+R + +R R V + SS
Sbjct: 783 RQVLTG--KIRVASL------VAKRQR---PTLLTERPKPRFPSRVDIDNEVSS------ 825
Query: 245 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 304
DYTVI + + D+ LL+ I TLTD+ + ++T + FY++ + G
Sbjct: 826 -----DYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKDIFGHK 880
Query: 305 ISSEAERERVIQCLEAAIER 324
I+S E + + L A+E+
Sbjct: 881 ITSVERLEEIREKLRVAVEQ 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L ++ L D+ L I A IS+ DVF V
Sbjct: 814 PSRVDIDNEVSSDYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYV 873
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI E ++ I+++L
Sbjct: 874 KDIFGHKITSVERLEEIREKL 894
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+++ T D+VGLL IT + L I A+IST +V D FYV D+ G+ +
Sbjct: 830 IDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKDIFGHKI 881
>gi|387814878|ref|YP_005430365.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381339895|emb|CCG95942.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 881
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+EL T DR GLL+ I ++ E+ + + A+I+T+G +V+D F++TD G+P+ DP + +
Sbjct: 809 MELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFITDEQGDPLRDPGVCQA 868
Query: 391 IRRQI 395
+++ +
Sbjct: 869 LQQDL 873
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V N+T TV+++ + ++ G+L ++ QVL + + + A I++ G DVF +
Sbjct: 793 PTEVTFSNDTINQRTVMELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFI 852
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G +RD V +QQ L
Sbjct: 853 TDEQGDPLRDPGVCQALQQDL 873
>gi|197286133|ref|YP_002152005.1| PII uridylyl-transferase [Proteus mirabilis HI4320]
gi|194683620|emb|CAR44522.1| [protein-PII] uridylyltransferase [Proteus mirabilis HI4320]
Length = 881
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 229 AVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
A +E S+ P V + E T I + DRP L + L + + + T
Sbjct: 675 AQALIEHNSAEPMVLISQQTEHGGTEIFIWCADRPSLFASVAGELDRRNLNIHNAQIFTN 734
Query: 288 R-TEAYQEFYIRHVDGLPIS---SEAERERVIQCLEAAIERRA----------------- 326
R A F + +G P++ A R+ +I+ + A A
Sbjct: 735 RDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTK 794
Query: 327 --------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 378
++ +EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD
Sbjct: 795 INFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDN 854
Query: 379 TGNPVDPKIIDSI 391
N ++ K+ D +
Sbjct: 855 ENNALNQKMKDEV 867
>gi|147800453|emb|CAN70848.1| hypothetical protein VITISV_038929 [Vitis vinifera]
Length = 453
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 33/207 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ +AT++++ ++ G LL + L ++ L + KA + D + F +
Sbjct: 85 PKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAIT 144
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ + ++S ++ + G+ P ++ H S
Sbjct: 145 KADTGRKVEDPELLEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPKQQVDVDIATHIS 204
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ G DRPGL ++ + D++ +V + E T A A HV+ G
Sbjct: 205 VNDDGPDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVS--YRG 262
Query: 169 YAIKDP--KRLSTIKELLFNVLRGYDD 193
AI P + +T K L G DD
Sbjct: 263 KAIIKPLQQNFNTTK---LGRLAGGDD 286
>gi|332288112|ref|YP_004418964.1| PII uridylyltransferase [Gallibacterium anatis UMN179]
gi|330431008|gb|AEC16067.1| PII uridylyltransferase [Gallibacterium anatis UMN179]
Length = 877
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 230 VGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
+ ++ED S+ V V + + T I + D+P+L +V TL + + T
Sbjct: 677 LCQIEDLSNEIVVLVSSRFSRGATEIFIYCADQPQLFNKVVRTLDAKNLSIHDAQIITAE 736
Query: 289 T-EAYQEFYIRHVDGLPISSEAERERVIQCLEA----------AIERRAS---------- 327
+ E + F + DG + ++ R+ + Q L+A A RR+S
Sbjct: 737 SGEVFDSFIVTENDGSALR-KSRRDEIAQVLKAVLKGEKRVPTATARRSSKLQHFNVPLE 795
Query: 328 ---------EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 378
E ELEL T+DR GLL+ I+ IF + L++ A+I+T G K +D F +T+
Sbjct: 796 VCFLNIEKTEQTELELITKDRAGLLAIISDIFTQQRLTLSNAKITTNGEKAEDFFILTNE 855
Query: 379 TGNPV 383
G +
Sbjct: 856 KGTAL 860
>gi|113460972|ref|YP_719039.1| PII uridylyl-transferase [Haemophilus somnus 129PT]
gi|112823015|gb|ABI25104.1| uridylyltransferase [Haemophilus somnus 129PT]
Length = 861
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 327 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
E E+ELC DR GLL++I++IF + L++ A+ISTIG KV+D F +T+
Sbjct: 788 QEQTEMELCALDRAGLLAEISQIFVQLELNLLNAKISTIGEKVEDFFILTN 838
>gi|83945035|ref|ZP_00957401.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
gi|83851817|gb|EAP89672.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
Length = 938
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLN--DVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
AT + V + ++H + + L+ N+V + +SDG F DVF V + GK
Sbjct: 730 ATEVMVLTPDRHALFADIAGALSREGANVVGAQVTTTSDGRAF-DVFYVQEQGGKPFGWS 788
Query: 85 EVIDYIQQRLET-------------------------DASFAPSLRSSVGVMPTEEHTSI 119
+ YIQ RL +A+F + ++ + +++ I
Sbjct: 789 D--SYIQDRLRDAVQSAAEHGLSSKDARPMLKPLRRREAAFTVTPSVNLDLEASDDALVI 846
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E TG DRPGL + L+D+ ++ A I + +RA +VT++ G+ RL+
Sbjct: 847 EATGRDRPGLLHALAKTLSDIGLSLEAARIDGYGERAVDTFYVTEN--GHKPSGDARLAG 904
Query: 180 IKELLFNVLRGYDD---FRKAKTSL-SPPGIMNR 209
IK L NVL G ++ +AK L S P R
Sbjct: 905 IKVHLMNVLAGAEEAVAVHRAKQGLVSTPASAGR 938
>gi|170717529|ref|YP_001784620.1| PII uridylyl-transferase [Haemophilus somnus 2336]
gi|168825658|gb|ACA31029.1| metal dependent phosphohydrolase [Haemophilus somnus 2336]
Length = 861
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 327 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
E E+ELC DR GLL++I++IF + L++ A+ISTIG KV+D F +T+
Sbjct: 788 QEQTEMELCALDRAGLLAEISQIFVQLELNLLNAKISTIGEKVEDFFILTN 838
>gi|85713993|ref|ZP_01044982.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
gi|85699119|gb|EAQ36987.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
Length = 925
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 902
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 903 APTRQTAIKRALVHLL 918
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 10 RRMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
+R+ P P+V I+N T+I+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 KRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGE 885
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 RARDVFYVTDLLGARI 901
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 850 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTRQTA 909
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 910 IKRALVH 916
>gi|397676406|ref|YP_006517944.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395397095|gb|AFN56422.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 926
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 93/236 (39%), Gaps = 38/236 (16%)
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
D WF + +VI + +QQ ++TD S S+ + MP + T I
Sbjct: 695 DDYWFSERTDVIAAN------------MQQIIDTD-SKGQSISVTGHEMPAYDATMISLY 741
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
D PG F + + N+++A I T D A + +S G IK + L+ + +
Sbjct: 742 AIDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQ 801
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
+ + + +L PP + R + H VE P V
Sbjct: 802 AIEDAATSHIRSSNKLAALRPP-LFWRGKAFH-----------VE------------PLV 837
Query: 243 TVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+ N D +TVI + ++DRP LL D+ C L + + + + T A FY+
Sbjct: 838 FIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYV 893
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI ++ + I++RL
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
>gi|260767827|ref|ZP_05876762.1| [Protein-PII] uridylyltransferase [Vibrio furnissii CIP 102972]
gi|260617336|gb|EEX42520.1| [Protein-PII] uridylyltransferase [Vibrio furnissii CIP 102972]
Length = 874
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V++ T I V + ++ + V+ L+ NL + A I +S
Sbjct: 670 LLRHEDPTQPLVMVSKKATRGGTEIFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G+ I R K + ++ LE R + V
Sbjct: 730 GYVLDTFMVLDQNGQAIEESRHKALSKHLVHVLEDGRPTKIKTRRIPRNLQHFKVKTQVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T +EF D PGL + V A A+LH ++ A+I T +RA
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLATVGATFAELHLDLHAAKITTIGERA 838
>gi|389792807|ref|ZP_10195989.1| (protein-PII) uridylyltransferase [Rhodanobacter fulvus Jip2]
gi|388435671|gb|EIL92568.1| (protein-PII) uridylyltransferase [Rhodanobacter fulvus Jip2]
Length = 877
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V +L+ + + +A I SS G MD F +
Sbjct: 684 PLVAVHPMSVRGSTELFVCTPDRDGLFASVTAMLDRLRFSVMEARILSSPKGMAMDTFLL 743
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------------------- 114
++ D ++ + + +QQRL+ +L S GV P++
Sbjct: 744 LEADSQQPANTVRAEELQQRLQR------ALTLSTGVQPSKRSMSRHQRHFQTAPKISFD 797
Query: 115 ---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST---G 168
+ T + GTDRPGL + V V+ D V +A I T +R ++D G
Sbjct: 798 DAGDRTQLALVGTDRPGLLAAVAQVILDAGARVHDARIATFGERVEDFFLLSDRHNAPLG 857
Query: 169 YAIKD 173
A++D
Sbjct: 858 PALRD 862
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
A + +L L DR GLL+ + ++ + + A I+T G +V+D F ++D P+ P
Sbjct: 799 AGDRTQLALVGTDRPGLLAAVAQVILDAGARVHDARIATFGERVEDFFLLSDRHNAPLGP 858
Query: 386 ----KIIDSIRRQIGHTK 399
+++ ++ +IG +K
Sbjct: 859 ALRDRLLHALLERIGPSK 876
>gi|375130169|ref|YP_004992269.1| protein-P-II uridylyltransferase [Vibrio furnissii NCTC 11218]
gi|315179343|gb|ADT86257.1| protein-P-II uridylyltransferase [Vibrio furnissii NCTC 11218]
Length = 874
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V++ T I V + ++ + V+ L+ NL + A I +S
Sbjct: 670 LLRHEDPTQPLVMVSKKATRGGTEIFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G+ I R K + ++ LE R + V
Sbjct: 730 GYVLDTFMVLDQNGQAIEESRHKALSKHLVHVLEDGRPTKIKTRRIPRNLQHFKVKTQVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T +EF D PGL + V A A+LH ++ A+I T +RA
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLATVGATFAELHLDLHAAKITTIGERA 838
>gi|90421866|ref|YP_530236.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB18]
gi|90103880|gb|ABD85917.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris BisB18]
Length = 931
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 904
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 905 APTRQAAIKRALIHLLANGD 924
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 38/209 (18%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 170
T + D P L S + A N+V+A+I+T D RA + +T D G
Sbjct: 739 TELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITREYDRDDDEG-- 796
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+R + I E++ ++L G L P ++ R
Sbjct: 797 ----RRATRIGEMIEDILEG---------KLRLPEVVARR----------------ASGK 827
Query: 231 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G+++ + P+V + N + YTVI + DRP LL+ + +++ + + V T
Sbjct: 828 GKLKPFTVEPEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGE 887
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCL 318
A FY+ + G I++ + + + L
Sbjct: 888 RARDVFYVTDLLGAQITAPTRQAAIKRAL 916
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 319 EAAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
E AI + SE +E+ DR GLL +T + +L+I A ++T G + +D FYVTD
Sbjct: 838 EVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVTD 897
Query: 378 VTGNPVD-PKIIDSIRRQIGH 397
+ G + P +I+R + H
Sbjct: 898 LLGAQITAPTRQAAIKRALIH 918
>gi|393765065|ref|ZP_10353658.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
gi|392729489|gb|EIZ86761.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
Length = 935
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L N+ +A + T +RA V +VTD TG +
Sbjct: 837 SSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVT 895
Query: 173 DPKRLSTIKELLFNVLRG 190
P R + I++ + +V G
Sbjct: 896 QPDRQAAIRKAMLDVFAG 913
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL ++T F SL+I A ++T G + D FYVTD+TG V P +
Sbjct: 843 VEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVTDLTGTRVTQPDRQAA 902
Query: 391 IRRQ--------IGHTKLQVKRSTILAPKPPKET 416
IR+ + + + + + AP PP+E
Sbjct: 903 IRKAMLDVFAGDVAMLRAEGLEALVAAP-PPREA 935
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV++V +++ G+L ++ ++L I A++++ G +DVF V
Sbjct: 827 PPDVGIDNALSSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYV 886
Query: 74 IDCDGKKI 81
D G ++
Sbjct: 887 TDLTGTRV 894
>gi|320155590|ref|YP_004187969.1| (Protein-PII) uridylyltransferase [Vibrio vulnificus MO6-24/O]
gi|319930902|gb|ADV85766.1| [Protein-PII] uridylyltransferase [Vibrio vulnificus MO6-24/O]
Length = 873
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 27/203 (13%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L+ N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPS---------------LRS 106
G+ +D F V+D G+ I K VI ++ L TD P+ +++
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVL-TDGR--PTKVKTRRTPYKLQHFKVKT 786
Query: 107 SVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
V +PT+ + T +E D PGL + A AD+ N+ A+I T +RA + +T
Sbjct: 787 KVDFLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTS 846
Query: 165 HSTGYAIKDPKRLSTIKELLFNV 187
+ G + + + L ++L+ N+
Sbjct: 847 ENGG-RLSEEQELQLREKLIHNI 868
>gi|37680743|ref|NP_935352.1| PII uridylyl-transferase [Vibrio vulnificus YJ016]
gi|62288143|sp|Q7MIF8.1|GLND_VIBVY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|37199492|dbj|BAC95323.1| protein-P-II uridylyltransferase [Vibrio vulnificus YJ016]
Length = 873
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 27/203 (13%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L+ N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPS---------------LRS 106
G+ +D F V+D G+ I K VI ++ L TD P+ +++
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVL-TDGR--PTKVKTRRTPYKLQHFKVKT 786
Query: 107 SVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
V +PT+ + T +E D PGL + A AD+ N+ A+I T +RA + +T
Sbjct: 787 KVDFLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTS 846
Query: 165 HSTGYAIKDPKRLSTIKELLFNV 187
+ G + + + L ++L+ N+
Sbjct: 847 ENGG-RLSEEQELQLREKLIHNI 868
>gi|326794433|ref|YP_004312253.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas mediterranea MMB-1]
gi|326545197|gb|ADZ90417.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas mediterranea MMB-1]
Length = 899
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
LE+ DR GLL+ I + F +N++ + +A+I+T+G +++DTFY+T+ G I DS+
Sbjct: 821 LEITAPDRPGLLAVIGQFFMQNNIMLHKAKIATLGERIEDTFYITEQNGE----LITDSM 876
Query: 392 RRQIGHTKLQ 401
R ++ T+L+
Sbjct: 877 RMKMICTRLK 886
>gi|152995299|ref|YP_001340134.1| metal dependent phosphohydrolase [Marinomonas sp. MWYL1]
gi|150836223|gb|ABR70199.1| metal dependent phosphohydrolase [Marinomonas sp. MWYL1]
Length = 897
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ I + F N++ + +A+I+T+G +V+DTFY+T+ G+ + DP+ +++
Sbjct: 821 LEITAPDRPGLLALIGQFFMNNNIMLHKAKIATLGERVEDTFYITEENGDLITDPESMNN 880
Query: 391 I 391
I
Sbjct: 881 I 881
>gi|402773665|ref|YP_006593202.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
gi|401775685|emb|CCJ08551.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
Length = 936
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 78 GKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
G+ + +E+ + L TDA S AP + V + +T IE +G DR GL E+
Sbjct: 812 GEVVVSEELRARAKTHLPTDAFSVAPEV--VVDNSLSNVYTVIEVSGLDREGLLFELTNA 869
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRK 196
++ L+ N+ +A I T +RA +VTD TG I P+R + IK L +V G R
Sbjct: 870 ISRLNLNIASAHIVTFGERAVDAFYVTD-LTGAKIASPQRQAAIKRQLLDVF-GGPGARG 927
Query: 197 AKT 199
AKT
Sbjct: 928 AKT 930
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VV+DN+ TVI+V +++ G+L ++ ++ +NL I A+I + G +D F V
Sbjct: 837 PEVVVDNSLSNVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVT 896
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS 107
D G KI + I+++L D P R +
Sbjct: 897 DLTGAKIASPQRQAAIKRQL-LDVFGGPGARGA 928
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL ++T +L+I A I T G + D FYVTD+TG + P+ +
Sbjct: 852 IEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVTDLTGAKIASPQRQAA 911
Query: 391 IRRQI 395
I+RQ+
Sbjct: 912 IKRQL 916
>gi|322419213|ref|YP_004198436.1| metal dependent phosphohydrolase [Geobacter sp. M18]
gi|320125600|gb|ADW13160.1| metal dependent phosphohydrolase [Geobacter sp. M18]
Length = 894
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T+ + + + G+ I + R + + L
Sbjct: 717 DIPGLFSMITGVMAANGMNILGAQIHTNTNEKVLDILQVNSPQGFVITEESRWARFETDL 776
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSRPQVT 243
VL G + P I+ E+ + V RVE +
Sbjct: 777 RQVLEGKVRVGQLVAKRHRPSILT---------------EKAKPTVPARVEIDN------ 815
Query: 244 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ DYTVI + + D+ LL+ I TLT + + ++T + FY++ + G
Sbjct: 816 --EVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQ 873
Query: 304 PISSEAERERVIQCLEAAIE 323
IS A+ E + + L AA++
Sbjct: 874 KISEPAKLEEIRKELLAAVD 893
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + ++ I++ L
Sbjct: 868 KDIFGQKISEPAKLEEIRKEL 888
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ D+VGLL IT L I ++IST +V D FYV D+ G + +P ++
Sbjct: 824 IDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKISEPAKLEE 883
Query: 391 IRRQI 395
IR+++
Sbjct: 884 IRKEL 888
>gi|77457326|ref|YP_346831.1| PII uridylyl-transferase [Pseudomonas fluorescens Pf0-1]
gi|398976829|ref|ZP_10686639.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
gi|91206750|sp|Q3KHB4.1|GLND_PSEPF RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77381329|gb|ABA72842.1| uridylyltransferase [Pseudomonas fluorescens Pf0-1]
gi|398138712|gb|EJM27726.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
Length = 900
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 386
LEL DR GLL+ + IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 387 IIDSIRRQI 395
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|27365205|ref|NP_760733.1| PII uridylyl-transferase [Vibrio vulnificus CMCP6]
gi|30173035|sp|Q8DBG3.1|GLND_VIBVU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|27361352|gb|AAO10260.1| protein-P-II uridylyltransferase [Vibrio vulnificus CMCP6]
Length = 873
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 27/203 (13%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L+ N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPS---------------LRS 106
G+ +D F V+D G+ I K VI ++ L A P+ +++
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVL---ADGRPTKVKTRRTPYKLQHFKVKT 786
Query: 107 SVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
V +PT+ + T +E D PGL + A AD+ N+ A+I T +RA + +T
Sbjct: 787 KVDFLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTS 846
Query: 165 HSTGYAIKDPKRLSTIKELLFNV 187
+ G + + + L ++L+ N+
Sbjct: 847 ENGG-RLSEEQELQLREKLIHNI 868
>gi|326509743|dbj|BAJ87087.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT+++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 72 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 131
Query: 75 DCD-GKKIRDKEVID-----YIQQRLE--TDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
G+KI D E+++ I LE +AS ++ ++ G+ P E ++
Sbjct: 132 KSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIE 191
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL + ++AD++ V + E T A A HV+
Sbjct: 192 IYDDGPERSLLVVESADRPGLLVGLVKIIADINITVQSGEFDTEGLLAKAKFHVS----- 246
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 247 --YRGKPLIKALQQVLANSLRYF 267
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 34/192 (17%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E T DR G + + L +L NVV A + + +T STG I DP
Sbjct: 83 DATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAITKSSTGRKIDDP 142
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTS------LSPPG-IMNRERRLHQIMFDDRDYERVE 227
+ L ++ + N + Y ++ + L PP +++ + H ++DD
Sbjct: 143 ELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIYDD------- 195
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
P+ ++L +E S DRP LL +V + D+ V G +T
Sbjct: 196 -----------GPERSLLVVE---------SADRPGLLVGLVKIIADINITVQSGEFDTE 235
Query: 288 RTEAYQEFYIRH 299
A +F++ +
Sbjct: 236 GLLAKAKFHVSY 247
>gi|452853079|ref|YP_007494763.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
gi|451896733|emb|CCH49612.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
Length = 867
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 83/202 (41%), Gaps = 25/202 (12%)
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
++ D PGLF+ + LA N++ A+I+T D A V + + +P
Sbjct: 682 TLTIAALDSPGLFATIAGALALHGLNILAADIFTWKDGTAVDV--------FTVGEPPEN 733
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
E+ V R R K ++ E RL D R+ K G
Sbjct: 734 LFPHEVWARVKRSIGYARVGK--------LDIESRLE----DRRNSPLTMKRPG----PR 777
Query: 238 SRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
RP VT+ N D YTVI + + DR LFD+ TL ++ + + T + A F+
Sbjct: 778 LRPIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFH 837
Query: 297 IRHVDGLPISSEAERERVIQCL 318
IR +G ++ A + V + L
Sbjct: 838 IRDTEGGKLTDSARLQAVHEAL 859
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DR G L D+ R SLSI A+I+TI G+ D F++ D G K+ DS
Sbjct: 795 IEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIRDTEGG----KLTDSA 850
Query: 392 RRQIGHTKL 400
R Q H L
Sbjct: 851 RLQAVHEAL 859
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 9 IRRMNP---PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
++R P P V IDN+ TVI+V + ++ G L + + L +++L I A I++ G
Sbjct: 771 MKRPGPRLRPIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKG 830
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
D+F++ D +G K+ D + + + L
Sbjct: 831 RAADIFHIRDTEGGKLTDSARLQAVHEAL 859
>gi|399006249|ref|ZP_10708777.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
gi|398122708|gb|EJM12294.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
Length = 900
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD + DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQDAI 881
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG K+IRD + DY IQ+R+ FA + ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQQ 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
+ DP+ S +++ + L S PP + R
Sbjct: 868 LSDPQLCSRLQDAIVEQL---------SVSQEPPTALTR 897
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D +++ D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSRLQ 878
>gi|425897799|ref|ZP_18874390.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892389|gb|EJL08867.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 900
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD + DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQDAI 881
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG K+IRD + DY IQ+R+ FA + ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQQ 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
+ DP+ S +++ + L S PP + R
Sbjct: 868 LSDPQLCSRLQDAIVEQL---------SVSHEPPTALTR 897
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D +++ D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSRLQ 878
>gi|398382543|ref|ZP_10540628.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
gi|397726649|gb|EJK87082.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
Length = 920
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 90/230 (39%), Gaps = 26/230 (11%)
Query: 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
SL + P T + TD PGLF + + N+++A I T D A +
Sbjct: 714 SLSIAAQYYPQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFL 773
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
G A P++L IK + + SLS NR R + ++ + R
Sbjct: 774 VQDPFGGAFHSPEQLGRIKAAI-------------EDSLS-----NRHRLITKL--EARP 813
Query: 223 YERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 281
R R E P V + N + +TVI + ++DRP LLF + L + V
Sbjct: 814 LPRT-----RAEAFQIVPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHS 868
Query: 282 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
V T A FY+ + G I S A + + + L A SE LE
Sbjct: 869 AHVATYGERAVDTFYVTDLLGGKIESRARLQTLERRLLEAAGGETSELLE 918
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + + +++RL
Sbjct: 886 DLLGGKIESRARLQTLERRL 905
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
+E+ DR LL + ++ +++ A ++T G + DTFYVTD+ G ++ +
Sbjct: 841 IEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVTDLLGGKIESR 895
>gi|156975508|ref|YP_001446415.1| PII uridylyl-transferase [Vibrio harveyi ATCC BAA-1116]
gi|166232255|sp|A7N1X9.1|GLND_VIBHB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|156527102|gb|ABU72188.1| hypothetical protein VIBHAR_03239 [Vibrio harveyi ATCC BAA-1116]
Length = 874
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE--EH 116
+D GK I R V +I LE P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|388602519|ref|ZP_10160915.1| PII uridylyl-transferase [Vibrio campbellii DS40M4]
Length = 874
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE--EH 116
+D GK I R V +I LE P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|309811519|ref|ZP_07705301.1| ACT domain protein [Dermacoccus sp. Ellin185]
gi|308434570|gb|EFP58420.1| ACT domain protein [Dermacoccus sp. Ellin185]
Length = 489
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP----KI 387
+E+ DR+GLL D+ F +S++ A I+T G+ DTFYVTD G+P+ P ++
Sbjct: 418 IEVRAADRLGLLFDVGSAFAAERVSVRSAHIATYAGRSADTFYVTDEQGSPLAPPHAARV 477
Query: 388 IDSIRRQIG 396
I ++ +G
Sbjct: 478 IGAVLDAVG 486
>gi|259416431|ref|ZP_05740351.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
gi|259347870|gb|EEW59647.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
Length = 907
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ + LA + NVV+A +T D + G+ + RL +
Sbjct: 722 FVMPDHPGIFARIAGALALVGANVVDARSYTTKDGFVTDAFWIQDADGHPF-EASRLPRL 780
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
+ ++ L G R A S I RER I FD+ D S
Sbjct: 781 RSMIEKTLHGEVIARDALKSRDK--IKKRERAFRVPTHITFDN--------------DGS 824
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 825 D-----------IYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYV 873
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
+ + GL S A+++ + + L AI
Sbjct: 874 KDMFGLKYHSAAKQQSLEKKLREAI 898
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V D+FYV D+ G
Sbjct: 830 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYVKDMFG 878
>gi|444424960|ref|ZP_21220409.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241745|gb|ELU53265.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 874
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE--EH 116
+D GK I R V +I LE P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|345865282|ref|ZP_08817470.1| [protein-PII] uridylyltransferase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345876936|ref|ZP_08828696.1| [protein-PII] uridylyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226044|gb|EGV52387.1| [protein-PII] uridylyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345123611|gb|EGW53503.1| [protein-PII] uridylyltransferase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 884
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+ L T DR GLLS++ + F +S++ A+ISTIG +V+D F++TD P+ + + ++
Sbjct: 810 MRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFITDRDKQPLQEEQQLEC 869
Query: 391 IRRQIGHTKLQVKRSTILAPKPPKE 415
+RR I PK P+E
Sbjct: 870 LRRSIAER----------LPKTPEE 884
>gi|389866034|ref|YP_006368275.1| [protein-PII] uridylyltransferase [Modestobacter marinus]
gi|388488238|emb|CCH89811.1| [Protein-PII] uridylyltransferase [Modestobacter marinus]
Length = 787
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 37/250 (14%)
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRS--SVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
G + V++ Q ++ T A P +VGV + + DRPGLFS
Sbjct: 557 GSAPLPEPVLEPTQPQVTTPAPSVPGQTGPVTVGVEDVLDGQQVTIGAADRPGLFSLCAG 616
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHST-GYAIKDPKRLSTIKELLFNVLRGYDDF 194
VLA +V RAA V H T +A++ + E+L D
Sbjct: 617 VLALNQLDV----------RAARVSVQDGHGTLVFAVRPRFGRPPVPEIL------ADGV 660
Query: 195 RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYT-- 252
R A P G R+R +RDY + +++ GR P+++ + E T
Sbjct: 661 RAALEGTLPLGERLRQR--------ERDYSQ-DRSPGRP------PRISWFDAEATGTTG 705
Query: 253 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERE 312
++ +R+ DR LL + L D V V T +A FY+ G PI + +RE
Sbjct: 706 LVEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDPSGTPIDPD-QRE 764
Query: 313 RVIQCLEAAI 322
R + L AA+
Sbjct: 765 RAERALVAAV 774
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
+E+ DR GLL +T + L + A + T+G D FYV+D +G P+DP
Sbjct: 707 VEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDPSGTPIDP 760
>gi|386818050|ref|ZP_10105268.1| UTP-GlnB uridylyltransferase, GlnD [Thiothrix nivea DSM 5205]
gi|386422626|gb|EIJ36461.1| UTP-GlnB uridylyltransferase, GlnD [Thiothrix nivea DSM 5205]
Length = 879
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFN 72
P + + + V+ V S ++ + +V+ L +NL V++ +S+ G+ + +
Sbjct: 685 PTLIHLRRTVSGSSNVLFVYSKDQDDLFSRVVSTLEQLNLNVVQARIVSTTDGFDLYTLH 744
Query: 73 VIDCDGKKI---RDKE-VIDYIQQRLETDASFAPSLRS-------------SVGVMPTEE 115
++ D + I D++ +ID ++ LE D S +LR S P +
Sbjct: 745 ILGPDNQLIISDADRQYIIDTLEANLERDISRQAALRKPRILRNFDVPTRVSFNQQPDKN 804
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
T IE D PGL S + + L V NA I T ++A + +VT G I D
Sbjct: 805 LTLIEINTGDMPGLLSRLGEAMDGLGIRVHNARINTLGEQAQDIFYVTARD-GSMITDET 863
Query: 176 RLSTIKELLFNVLRG 190
+ + I+E+L L+G
Sbjct: 864 QQAHIREVLVQALKG 878
>gi|120555461|ref|YP_959812.1| PII uridylyl-transferase [Marinobacter aquaeolei VT8]
gi|120325310|gb|ABM19625.1| metal dependent phosphohydrolase [Marinobacter aquaeolei VT8]
Length = 881
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+EL T DR GLL+ I ++ E+ + + A+I+T+G +V+D F++TD G P+ DP + +
Sbjct: 809 MELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFITDEQGEPLRDPGVCQA 868
Query: 391 IRRQI 395
+++ +
Sbjct: 869 LQQDL 873
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V N+T TV+++ + ++ G+L ++ QVL + + + A I++ G DVF +
Sbjct: 793 PTEVTFSNDTINQRTVMELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFI 852
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+ +RD V +QQ L
Sbjct: 853 TDEQGEPLRDPGVCQALQQDL 873
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E DRPGL + + VL + + NA+I T +R V +TD G ++DP
Sbjct: 805 QRTVMELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFITDEQ-GEPLRDP 863
Query: 175 KRLSTIKELLFNVL 188
+++ L +L
Sbjct: 864 GVCQALQQDLCKML 877
>gi|350532167|ref|ZP_08911108.1| PII uridylyl-transferase [Vibrio rotiferianus DAT722]
Length = 874
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE--EH 116
+D GK I R V +I LE P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSETGG 850
>gi|406894154|gb|EKD39032.1| hypothetical protein ACD_75C00526G0001, partial [uncultured
bacterium]
Length = 771
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 89/227 (39%), Gaps = 36/227 (15%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
RS V TE+ + DRPGL +++C V+A + VV A+I+T D VV V D
Sbjct: 571 RSLVVASETEDSWQLLIMTVDRPGLLAKICGVMALNNLTVVKAQIFTWAD--GTVVDVID 628
Query: 165 ----HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
G+A K + L+ +L H++
Sbjct: 629 VRATDGLGFAEKGWRSLNEQLDLAIE---------------------------HRMGLSH 661
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQY 277
R Y ++ GR ++ V+ ++Y+VI + + D P L+ I ++ D
Sbjct: 662 RLYRKLSSGYGRRSQRAGEVASKVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGL 721
Query: 278 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
+ + T + FY+ G + E R+ V Q + +I+R
Sbjct: 722 NIHKAYIATELEQLIDVFYVLDSRGQKLVDEDFRQEVTQGILHSIDR 768
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
+VVIDN + + +VI+V + + G L + Q + D L I KAYI+++ +DVF V
Sbjct: 682 ASKVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYV 741
Query: 74 IDCDGKKIRDKE 85
+D G+K+ D++
Sbjct: 742 LDSRGQKLVDED 753
>gi|115522288|ref|YP_779199.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisA53]
gi|115516235|gb|ABJ04219.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
BisA53]
Length = 931
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 904
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D +K
Sbjct: 905 APTRQAAIKRALIHLLADADAAQK 928
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 37/209 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 170
T + D P L S + A N+V+A+I+T D RA + +T D G
Sbjct: 738 TELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITREYDRDEDEG-- 795
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+R + I +++ VL G L P ++ R R
Sbjct: 796 ----RRATRIGDMIEEVLEG---------KLRLPDVVAR---------------RATNGK 827
Query: 231 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
G+++ + P+V + N D YTVI + DRP LL+ + ++ + + V T
Sbjct: 828 GKLKPFTVEPEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 887
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCL 318
A FY+ + G I++ + + + L
Sbjct: 888 RARDVFYVTDLLGAQITAPTRQAAIKRAL 916
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N+ TVI+V +++ G+L Q+ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 852 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 911
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 912 IKRALIH 918
>gi|420241261|ref|ZP_14745409.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
gi|398072002|gb|EJL63238.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
Length = 945
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLL+DIT + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 848 DRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYVTDLVGQKV 893
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V++ N TVI+V+ +++ G+L + VL D++L I A I++ G +D F V
Sbjct: 826 PPSVILSNGLSNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAP-SLRSSVGVMPT 113
D G+K+ ++ I RL+ S LRS MPT
Sbjct: 886 TDLVGQKVVNENRQGNIAARLKAVMSEQEDELRSG---MPT 923
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 78 GKKIRDKEVIDYIQQRLETDASFA--PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
GKK R EVI + + + +F PS+ S G+ + + T IE DR GL +++ A
Sbjct: 802 GKK-RLPEVIATRAKSRKRNKTFTIPPSVILSNGL--SNKFTVIEVECLDRTGLLADITA 858
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195
VLADL ++ +A I T ++ +VTD G + + R I L V+ +D
Sbjct: 859 VLADLSLDIHSARITTFGEKVIDTFYVTD-LVGQKVVNENRQGNIAARLKAVMSEQEDEL 917
Query: 196 KAKTSLSPPGIM 207
+ S P GI+
Sbjct: 918 R---SGMPTGII 926
>gi|262166338|ref|ZP_06034075.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM223]
gi|262026054|gb|EEY44722.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM223]
Length = 622
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 425 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 484
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 485 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 544
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + + +
Sbjct: 545 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEEEE 603
Query: 177 LSTIKELLFNVLR 189
++L+ NV R
Sbjct: 604 QLLREKLIENVAR 616
>gi|31789388|gb|AAP58504.1| putative PII uridylyltransferase [uncultured Acidobacteria
bacterium]
Length = 938
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+FA ++ + +T +E TG DR GL E+ A L+ L+ N+ +A + T +R
Sbjct: 838 AFALEPTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVID 897
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTS 200
V +VTD G I P R + IK L + G ++ KA +
Sbjct: 898 VFYVTD-LLGAQITSPTRQAAIKRALIALFAGPNNESKAAKA 938
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N T+++V +++ G+L ++ L+ +NL I A++++ G +DVF V
Sbjct: 843 PTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVT 902
Query: 75 DCDGKKI 81
D G +I
Sbjct: 903 DLLGAQI 909
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL ++T + +L+I A ++T G +V D FYVTD+ G + P +
Sbjct: 858 VEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVTDLLGAQITSPTRQAA 917
Query: 391 IRRQI 395
I+R +
Sbjct: 918 IKRAL 922
>gi|425070066|ref|ZP_18473181.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW6]
gi|404596023|gb|EKA96553.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW6]
Length = 881
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 229 AVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
A +E S+ P V + E T + + DRP L + L + + + T
Sbjct: 675 AQALIEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTN 734
Query: 288 RTE-AYQEFYIRHVDGLPIS---SEAERERVIQCLEAAIERRA----------------- 326
R A F + +G P++ A R+ +I+ + A A
Sbjct: 735 RDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTK 794
Query: 327 --------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 378
++ +EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD
Sbjct: 795 INFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDN 854
Query: 379 TGNPVDPKIIDSI 391
N ++ K+ D +
Sbjct: 855 ENNALNQKMKDEV 867
>gi|227357253|ref|ZP_03841610.1| [protein-PII] uridylyltransferase [Proteus mirabilis ATCC 29906]
gi|227162516|gb|EEI47505.1| [protein-PII] uridylyltransferase [Proteus mirabilis ATCC 29906]
Length = 881
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 229 AVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
A +E S+ P V + E T + + DRP L + L + + + T
Sbjct: 675 AQALIEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTN 734
Query: 288 RTE-AYQEFYIRHVDGLPIS---SEAERERVIQCLEAAIERRA----------------- 326
R A F + +G P++ A R+ +I+ + A A
Sbjct: 735 RDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTK 794
Query: 327 --------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 378
++ +EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD
Sbjct: 795 INFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDN 854
Query: 379 TGNPVDPKIIDSI 391
N ++ K+ D +
Sbjct: 855 ENNALNQKMKDEV 867
>gi|425071434|ref|ZP_18474540.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW4]
gi|404599241|gb|EKA99701.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW4]
Length = 881
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 229 AVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
A +E S+ P V + E T + + DRP L + L + + + T
Sbjct: 675 AQALIEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTN 734
Query: 288 RTE-AYQEFYIRHVDGLPIS---SEAERERVIQCLEAAIERRA----------------- 326
R A F + +G P++ A R+ +I+ + A A
Sbjct: 735 RDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTK 794
Query: 327 --------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 378
++ +EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD
Sbjct: 795 INFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDN 854
Query: 379 TGNPVDPKIIDSI 391
N ++ K+ D +
Sbjct: 855 ENNALNQKMKDEV 867
>gi|84498339|ref|ZP_00997136.1| PII uridylyl-transferase [Janibacter sp. HTCC2649]
gi|84381839|gb|EAP97722.1| PII uridylyl-transferase [Janibacter sp. HTCC2649]
Length = 789
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DR GLL ++ F + +S++ A I+T G+ DTFYV+D +G P+DP + +
Sbjct: 718 IEVRAHDRPGLLHELGMCFAKAGVSVRSAHIATYAGQTLDTFYVSDFSGRPLDPGKVAQV 777
>gi|88812375|ref|ZP_01127625.1| Protein-P-II uridylyltransferase [Nitrococcus mobilis Nb-231]
gi|88790382|gb|EAR21499.1| Protein-P-II uridylyltransferase [Nitrococcus mobilis Nb-231]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P ++ID + T + V + ++ I + LN + L I+ A I++D G +D + V
Sbjct: 696 PLILIDPISTRGGTEVFVYTRDRDHIFALTVTALNQLGLDIQDARIITTDDGHTLDSYLV 755
Query: 74 IDCDGKKI----RDKEVIDYIQQRLETDASF-APSLRS--------------SVGVMPTE 114
++ GK I R++E+I+++ L PS R+ P
Sbjct: 756 LEDTGKPIAAGYREREIIEHLSTMLCPGKPLPQPSTRTLPRRLRHFSTQTQIEFTAEPHN 815
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNV--VNAEIWTHNDRAAAVVHVTD 164
+ T++E DRPGL ++V A +HC V NA+I T +RA V +TD
Sbjct: 816 DRTAMELITGDRPGLLAQVG--YAFVHCGVRLQNAKISTMGERAEDVFFLTD 865
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+EL T DR GLL+ + F + ++ A+IST+G + +D F++TD + +
Sbjct: 820 MELITGDRPGLLAQVGYAFVHCGVRLQNAKISTMGERAEDVFFLTDRNNRALGTASQQCL 879
Query: 392 RRQI 395
R Q+
Sbjct: 880 REQL 883
>gi|146281909|ref|YP_001172062.1| PII uridylyl-transferase [Pseudomonas stutzeri A1501]
gi|339493516|ref|YP_004713809.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386020180|ref|YP_005938204.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|189041209|sp|A4VJR9.1|GLND_PSEU5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145570114|gb|ABP79220.1| protein-PII uridylyltransferase [Pseudomonas stutzeri A1501]
gi|327480152|gb|AEA83462.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|338800888|gb|AEJ04720.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQLCLR 876
Query: 391 IRRQI 395
+++ I
Sbjct: 877 LQQAI 881
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +QQ
Sbjct: 861 TDADNQPLSDPQLCLRLQQ 879
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETD-ASFAPSLRSSVGV 110
+ V++ DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLEADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ + L+ ++ + + +S+
Sbjct: 868 LSDPQLCLRLQQAIIKELQQENEQQPSPSSI 898
>gi|269127631|ref|YP_003301001.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
gi|268312589|gb|ACY98963.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
Length = 780
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV I + ATV++V + ++ G+L ++ Q + L + KA + + G +DVF V
Sbjct: 695 PPRVTIVEDASDTATVVEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVFYV 754
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+D G+ +R+ + +++++
Sbjct: 755 VDAQGRPLREPAALSALREKV 775
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL I + L + +A + T+G + D FYV D G P+ +P + +
Sbjct: 711 VEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVFYVVDAQGRPLREPAALSA 770
Query: 391 IRRQI 395
+R ++
Sbjct: 771 LREKV 775
>gi|291286752|ref|YP_003503568.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
gi|290883912|gb|ADD67612.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
Length = 863
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ +DR+GLL DI R F + L+++RA+IST +V D+FY+ D G + D +++D+
Sbjct: 790 VDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVDKHGKKITDQRVLDN 849
Query: 391 IRRQIG 396
IR ++
Sbjct: 850 IRGELS 855
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
++V DN+ + T++ + + ++ G+L +++ N L +++A IS+D +D F ++D
Sbjct: 776 KIVFDNDVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVD 835
Query: 76 CDGKKIRDKEVIDYIQ----QRLETD 97
GKKI D+ V+D I+ + +ETD
Sbjct: 836 KHGKKITDQRVLDNIRGELSKEIETD 861
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 114 EEHTSIEF--TGTDRPGLFSEVCAVLADLHCNVVNAEIWT-HNDRAAAVVHVTDHSTGYA 170
EE +IE DRP L S++C L+ N+ A+I+T ND + + + +G
Sbjct: 671 EELDTIELIVCAKDRPALLSDICGALSSFSYNIKWAKIYTMENDVTIDNIMIANPFSGRK 730
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRK---AKTSLSPPGIMNRERRLHQIMFDDRDYERVE 227
+ + K+ S K ++ + G D R+ +++S+ P + ++ +I+FD+
Sbjct: 731 MPEDKQESLKKRIINTIKDGRDIKRQITQSESSIKGPAQVFIKK--DKIVFDN------- 781
Query: 228 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 287
++ +YT++ + +KDR LL+DI+ + + V ++T
Sbjct: 782 ------------------DVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTD 823
Query: 288 RTEAYQEFYIRHVDGLPISSE 308
FY+ G I+ +
Sbjct: 824 VDRVVDSFYLVDKHGKKITDQ 844
>gi|414884706|tpg|DAA60720.1| TPA: hypothetical protein ZEAMMB73_962452 [Zea mays]
Length = 418
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG--LPISSEA 309
TV+T+ D+ L D+ + + V G ++T Y ++ G +P+ +
Sbjct: 21 TVVTVSCPDKTGLGCDLCRVVLLFRLSVVKGDMSTDGRWCYIVLWVLPRGGRPVPVPWDL 80
Query: 310 ERERVIQCLEAAI------ERRASEGLE-----------LELCTEDRVGLLSDITRIFRE 352
++R++Q A A+ GL+ L+LC DR+GLL D+TR+ E
Sbjct: 81 LKDRLLQLCPVAPPFGFDNAYLAAAGLQDLAPPPPKLFLLKLCCFDRMGLLHDVTRVLCE 140
Query: 353 NSLSIKRAEISTI-GGKVKDTFYVTD 377
L+I+R ++ST G V D F++TD
Sbjct: 141 LELTIRRVKVSTTPDGSVLDLFFITD 166
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ + T+I++ + G+L +++ + D N+ + + Y S +G +D+F V
Sbjct: 239 VTMDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNGRCEIDLFAV- 297
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL + P + V P E +E +G RP +F
Sbjct: 298 QSDGKKILDQHRQRALCCRLRMEL-LRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 356
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV---TDHSTGYAIKDPKRLSTIKELLFN 186
++ L +L + AEI H DR V + +H A++ S I + + N
Sbjct: 357 DITLALKNLQKRIFLAEIGRHVVEDREWEVYRLHFGEEHELSSALR-----SKIVDEVTN 411
Query: 187 VLRGYD 192
+L G+D
Sbjct: 412 MLMGWD 417
>gi|374328694|ref|YP_005078878.1| [protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
gi|359341482|gb|AEV34856.1| [Protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
Length = 942
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 99 SFAPSLRSSVGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
S A SL+++V V + E +T +E TG DRPGL S++ ++ L+ N+ +A + T ++A
Sbjct: 830 SKAFSLQTTVLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKA 889
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
V +VTD TG + + R +I++ L N G
Sbjct: 890 VDVFYVTD-LTGQKVHNVGRQESIRDRLKNAFDG 922
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
LE+ DR GLLSD+T +L+I A + T G K D FYVTD+TG V
Sbjct: 852 LEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDLTGQKV 903
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V++ N+ + TV++V +++ G+L + ++ +NL I A++ + G +DVF V D
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 77 DGKKIRDKEVIDYIQQRLET 96
G+K+ + + I+ RL+
Sbjct: 899 TGQKVHNVGRQESIRDRLKN 918
>gi|343492904|ref|ZP_08731251.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
gi|342826699|gb|EGU61113.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
Length = 873
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + S + + V L+ N I A + +S G+ +D F V
Sbjct: 679 PLVLLSKKPTRGGTEVFIYSPDLPNLFANVAGELDRRNFSIHDAQVMTSKDGYALDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPTE--EHT 117
+D GK I R V+ +Q L+ +S ++++ V +PT+ + T
Sbjct: 739 LDQHGKPIEENRHATVVKQLQSVLDETSSATKVRRTPRQLMHFNVKTKVDFIPTKTKKRT 798
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+EF D PGL + V A ADL+ N+ A+I T +RA + +T + G
Sbjct: 799 LMEFVALDTPGLLANVGATFADLNINLHAAKITTIGERAEDLFILTSPNGG 849
>gi|254472092|ref|ZP_05085492.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
gi|211958375|gb|EEA93575.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
Length = 942
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 99 SFAPSLRSSVGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
S A SL+++V V + E +T +E TG DRPGL S++ ++ L+ N+ +A + T ++A
Sbjct: 830 SKAFSLQTTVLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKA 889
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
V +VTD TG + + R +I++ L N G
Sbjct: 890 VDVFYVTD-LTGQKVHNVGRQESIRDRLKNAFDG 922
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
LE+ DR GLLSD+T +L+I A + T G K D FYVTD+TG V
Sbjct: 852 LEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDLTGQKV 903
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V++ N+ + TV++V +++ G+L + ++ +NL I A++ + G +DVF V D
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 77 DGKKIRDKEVIDYIQQRLET 96
G+K+ + + I+ RL+
Sbjct: 899 TGQKVHNVGRQESIRDRLKN 918
>gi|188579682|ref|YP_001923127.1| PII uridylyl-transferase [Methylobacterium populi BJ001]
gi|179343180|gb|ACB78592.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium populi BJ001]
Length = 928
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG + P R
Sbjct: 834 TVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVMQPDR 892
Query: 177 LSTIKELLFNVL 188
L+ I+ + V
Sbjct: 893 LAMIRAAVMEVF 904
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 880 TDLTGTRVMQPDRLAMIRAAVMEVFASDVAALRA 913
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V P +
Sbjct: 836 VEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVMQPDRLAM 895
Query: 391 IRRQI 395
IR +
Sbjct: 896 IRAAV 900
>gi|56551662|ref|YP_162501.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis ZM4]
gi|81355226|sp|Q5NPH0.1|GLND_ZYMMO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56543236|gb|AAV89390.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 926
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 38/236 (16%)
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
D WF + +VI + +QQ ++TD S S+ MP + T I
Sbjct: 695 DDYWFSERTDVIAAN------------MQQIIDTD-SKGQSISVRGHEMPAYDATMISLY 741
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
D PG F + + N+++A I T D A + +S G IK + L+ + +
Sbjct: 742 AIDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQ 801
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
+ + + +L PP + R + H VE P V
Sbjct: 802 AIEDAATSHIRSSNKLAALRPP-LFWRGKAFH------------------VE-----PLV 837
Query: 243 TVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+ N D +TVI + ++DRP LL D+ C L + + + + T A FY+
Sbjct: 838 FIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYV 893
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI ++ + I++RL
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
>gi|408376881|ref|ZP_11174484.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
gi|407748840|gb|EKF60353.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
Length = 941
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR+GLL++IT + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 848 DRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVTDLVGQKV 893
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L ++ VL+D++L I A I++ G +D F V
Sbjct: 827 PDVRISNALSNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVT 886
Query: 75 DCDGKKIRDKEVIDYIQQRLE 95
D G+K+ ++ I RL+
Sbjct: 887 DLVGQKVTNENRQVNIANRLK 907
>gi|414175718|ref|ZP_11430122.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
gi|410889547|gb|EKS37350.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
Length = 947
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
S+ ++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD
Sbjct: 856 SINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-L 914
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRK 196
G I P R + IK L ++L D K
Sbjct: 915 LGAQITAPTRQAAIKRALIHLLANGDAAEK 944
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 26/203 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 755 TELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEGRR 814
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ I + + VL G L P +M R + R++
Sbjct: 815 ATRIGDTIEQVLEG---------KLRLPDMMARR----------------TASKTRLKPF 849
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
S P+V++ N D YTVI + DRP LLF + ++ + + V T A F
Sbjct: 850 SVEPEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVF 909
Query: 296 YIRHVDGLPISSEAERERVIQCL 318
Y+ + G I++ + + + L
Sbjct: 910 YVTDLLGAQITAPTRQAAIKRAL 932
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 845 RLKPFSVEPEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 904
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 905 ARDVFYVTDLLGAQI 919
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 868 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 927
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 928 IKRALIH 934
>gi|121998250|ref|YP_001003037.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
gi|121589655|gb|ABM62235.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
Length = 889
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P V+ + I + + + + + + L+ + L I+ A I++DGG+ +D + V
Sbjct: 690 PLVLAASQETGGGARIFLYAPDSRDLFARCVWALDRLGLSIQDARVITTDGGFTLDSYRV 749
Query: 74 IDCDGKKIRDKEVIDYIQQRL-----ETDASFAP----------SLRSSVGVM----PTE 114
++ G +++ ++ ++Q L E AP R+ + P
Sbjct: 750 LEQHGAPPSEEQRLEEVRQALAAAAAEQGPPPAPVARHIPRQLQHFRTETQIHFTDDPDN 809
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
T +E DRPGL + V + V NA+I T +RA V +TD G ++ P
Sbjct: 810 HRTVVELITADRPGLLARVGKAFSGCGVRVKNAKIATMGERAEDVFFITD-DQGQPLRLP 868
Query: 175 KRLSTIKELLFNVL 188
+ ++E L+ +L
Sbjct: 869 VQYRCVREALYELL 882
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+EL T DR GLL+ + + F + +K A+I+T+G + +D F++TD G P+
Sbjct: 814 VELITADRPGLLARVGKAFSGCGVRVKNAKIATMGERAEDVFFITDDQGQPL 865
>gi|333908996|ref|YP_004482582.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas posidonica
IVIA-Po-181]
gi|333479002|gb|AEF55663.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas posidonica
IVIA-Po-181]
Length = 897
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ DR GLL+ I + F +++ + +A+I+T+G +V+DTFY+TD G + DP+ +D
Sbjct: 821 LEVTAPDRPGLLALIGQFFMNHNIMLHKAKIATLGERVEDTFYITDDQGELISDPQRMDK 880
Query: 391 I 391
I
Sbjct: 881 I 881
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 47 VLNDVNLVIKKAYIS-SDGGWFMDVFNVID---CDGKKIRDKEVIDYIQ----QRLETDA 98
+ + L I A IS + + +D F V+D D DK+ ID I+ ++LE +
Sbjct: 726 IFEQLGLTILDAKISHTSDNYTLDSFVVMDSNEADKNLYLDKQRIDLIKDTLMEQLENPS 785
Query: 99 SFAPSL-RSSVGVM-----PTEEH---------TSIEFTGTDRPGLFSEVCAVLADLHCN 143
S+ + R + ++ P+ H +++E T DRPGL + + + +
Sbjct: 786 SYGSVVQRHTPRILKIFNSPSTAHFVSQAEEVWSALEVTAPDRPGLLALIGQFFMNHNIM 845
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ A+I T +R ++TD G I DP+R+ I LL
Sbjct: 846 LHKAKIATLGERVEDTFYITD-DQGELISDPQRMDKICNLL 885
>gi|171914691|ref|ZP_02930161.1| protein-P-II uridylyltransferase, putative [Verrucomicrobium
spinosum DSM 4136]
Length = 934
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV I+N+ D VI++ ++++ G+L + + + L I A I+++ G +D +
Sbjct: 834 PQRVYINNDLTTDYNVIEIQALDRIGLLYDIFMAIGQLGLNICHARINTEKGVALDAIYI 893
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM 111
D +K+ DK+V+ +Q +LE +A F+ ++S G++
Sbjct: 894 QDKAEQKVTDKDVLKELQAQLE-EAVFSFGRQNSSGML 930
>gi|384411454|ref|YP_005620819.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335931828|gb|AEH62368.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 926
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 38/236 (16%)
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
D WF + +VI + +QQ ++TD S S+ MP + T I
Sbjct: 695 DDYWFSERTDVIAAN------------MQQIIDTD-SKGQSISVRGHEMPAYDATMISLY 741
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
D PG F + + N+++A I T D A + +S G IK + L+ + +
Sbjct: 742 AIDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQ 801
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
+ + + +L PP + R + H VE P V
Sbjct: 802 AIEDAATSHIRSSNKLAALRPP-LFWRGKAFH------------------VE-----PLV 837
Query: 243 TVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+ N D +TVI + ++DRP LL D+ C L + + + + T A FY+
Sbjct: 838 FIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYV 893
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI ++ + I++RL
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
>gi|4520376|dbj|BAA75913.1| uridylyl transferase [Pseudomonas aeruginosa]
Length = 900
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDAVRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|222055851|ref|YP_002538213.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
gi|221565140|gb|ACM21112.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
Length = 897
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN AD TVI + + +K G+L ++ L+++ L I + +S+ DVF V
Sbjct: 810 PTRVEIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYV 869
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI D++ ++ I+ RL
Sbjct: 870 KDIFGQKILDQDKLEEIRGRL 890
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
D PGLFS + V+A N++ A I T+ N + V+ V + G+ I D R +++
Sbjct: 719 DTPGLFSMITGVMAANGMNILGAHILTNLNGKVLDVLQV-NSPQGFVITDEARWQRVEDD 777
Query: 184 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP-QV 242
+ VL G KT ++ + ++R H+ F EKA K P +V
Sbjct: 778 MRQVLEG-------KTKIAA---LVKKR--HRAAF------LAEKA------KPKFPTRV 813
Query: 243 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 301
+ N + DYTVI + + D+ LL+ I L+++ + V+T + FY++ +
Sbjct: 814 EIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYVKDIF 873
Query: 302 GLPI----SSEAERERVIQCLEAA 321
G I E R R++Q ++ A
Sbjct: 874 GQKILDQDKLEEIRGRLLQSIDEA 897
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ T D+VGLL IT E L I +++ST +V D FYV D+ G + D ++
Sbjct: 826 IDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYVKDIFGQKILDQDKLEE 885
Query: 391 IRRQI 395
IR ++
Sbjct: 886 IRGRL 890
>gi|15598854|ref|NP_252348.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO1]
gi|254236571|ref|ZP_04929894.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|254242355|ref|ZP_04935677.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|355639998|ref|ZP_09051488.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|386057355|ref|YP_005973877.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|418586107|ref|ZP_13150153.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589465|ref|ZP_13153387.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|421152533|ref|ZP_15612113.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|421166110|ref|ZP_15624378.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|421518201|ref|ZP_15964875.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|451987762|ref|ZP_21935914.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
gi|12230934|sp|Q9Z9H0.2|GLND_PSEAE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|9949819|gb|AAG07046.1|AE004785_10 protein-PII uridylyltransferase [Pseudomonas aeruginosa PAO1]
gi|126168502|gb|EAZ54013.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|126195733|gb|EAZ59796.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|347303661|gb|AEO73775.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|354831518|gb|EHF15530.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|375043781|gb|EHS36397.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051699|gb|EHS44165.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|404347683|gb|EJZ74032.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|404525293|gb|EKA35569.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404539087|gb|EKA48592.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|451754521|emb|CCQ88437.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
Length = 900
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|296387835|ref|ZP_06877310.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAb1]
gi|416873843|ref|ZP_11917746.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
gi|334844257|gb|EGM22834.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
Length = 900
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|167950394|ref|ZP_02537468.1| UTP-GlnB uridylyltransferase, GlnD [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 346
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+ L T DR GLLS++ + F +S++ A+ISTIG +V+D F++TD P+ + + ++
Sbjct: 272 MRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFITDRDKQPLQEEQQLEC 331
Query: 391 IRRQIGHTKLQVKRSTILAPKPPKE 415
+RR I PK P+E
Sbjct: 332 LRRSIAER----------LPKTPEE 346
>gi|107103172|ref|ZP_01367090.1| hypothetical protein PaerPA_01004241 [Pseudomonas aeruginosa PACS2]
gi|218890117|ref|YP_002438981.1| PII uridylyl-transferase [Pseudomonas aeruginosa LESB58]
gi|416854831|ref|ZP_11911161.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|420138143|ref|ZP_14646084.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|421158549|ref|ZP_15617797.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|421179178|ref|ZP_15636774.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|424939528|ref|ZP_18355291.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|226723946|sp|B7V7F5.1|GLND_PSEA8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218770340|emb|CAW26105.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa LESB58]
gi|334843580|gb|EGM22167.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|346055974|dbj|GAA15857.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|403249126|gb|EJY62641.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|404547421|gb|EKA56419.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|404549490|gb|EKA58348.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|453047335|gb|EME95049.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA21_ST175]
Length = 900
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|116051655|ref|YP_789506.1| PII uridylyl-transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173104|ref|ZP_15630858.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
gi|122260798|sp|Q02RD0.1|GLND_PSEAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|115586876|gb|ABJ12891.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536405|gb|EKA46045.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
Length = 900
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|23012593|ref|ZP_00052640.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 654
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG + P R
Sbjct: 560 TVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVMQPDR 618
Query: 177 LSTIKELLFNVL 188
L+ I+ + V
Sbjct: 619 LAMIRAAVMEVF 630
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 546 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 605
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 606 TDLTGTRVMQPDRLAMIRAAVMEVFASDVAALRA 639
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V
Sbjct: 562 VEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTDLTGTRV 613
>gi|313109063|ref|ZP_07795035.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|386067693|ref|YP_005982997.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982618|ref|YP_006481205.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
gi|419754750|ref|ZP_14281108.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|310881537|gb|EFQ40131.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|348036252|dbj|BAK91612.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|384398568|gb|EIE44973.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318123|gb|AFM63503.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
Length = 900
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|452878644|ref|ZP_21955838.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
gi|452184717|gb|EME11735.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
Length = 900
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|152988175|ref|YP_001346865.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA7]
gi|166990444|sp|A6V1D0.1|GLND_PSEA7 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150963333|gb|ABR85358.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa PA7]
Length = 900
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|91974598|ref|YP_567257.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB5]
gi|91681054|gb|ABE37356.1| protein-P-II uridylyltransferase [Rhodopseudomonas palustris BisB5]
Length = 933
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D +K
Sbjct: 907 APTRQAAIKRALVHLLANGDAEQK 930
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G DVF V
Sbjct: 839 PEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 75 DCDGKKI 81
D G +I
Sbjct: 899 DLLGAQI 905
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 854 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 913
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 914 IKRALVH 920
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 37/222 (16%)
Query: 104 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 162
L +VG T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 727 LAVNVGFDEARGVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISI 786
Query: 163 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 217
D G +R + I E++ VL G L P + R
Sbjct: 787 RREYDRDEDEG------RRATRIGEIIEEVLEG---------KLRLPEAVAR-------- 823
Query: 218 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 276
R + ++ P++++ N D YTVI + DRP LL+ + ++ +
Sbjct: 824 -------RATSSKTKLRAFVVEPEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLN 876
Query: 277 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+ V T A FY+ + G I++ + + + L
Sbjct: 877 LNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAAIKRAL 918
>gi|414169144|ref|ZP_11424981.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
gi|410885903|gb|EKS33716.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
Length = 928
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 901
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 902 APTRQAAIKRALIHLLANGD 921
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 ARDVFYVTDLLGAQI 900
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 26/203 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 736 TELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEGRR 795
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ I + + VL G L P +M R + R++
Sbjct: 796 ATRIGDTIEQVLEG---------KLRLPDVMARR----------------TASKTRLKPF 830
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+VT+ N D YTVI + DRP LLF + ++ + + V T A F
Sbjct: 831 IVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVF 890
Query: 296 YIRHVDGLPISSEAERERVIQCL 318
Y+ + G I++ + + + L
Sbjct: 891 YVTDLLGAQITAPTRQAAIKRAL 913
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 849 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 908
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 909 IKRALIH 915
>gi|338972269|ref|ZP_08627644.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234433|gb|EGP09548.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
Length = 928
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 901
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 902 APTRQAAIKRALIHLLANGD 921
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 ARDVFYVTDLLGAQI 900
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 26/203 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 736 TELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEGRR 795
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
+ I + + VL G L P +M R + R++
Sbjct: 796 ATRIGDTIEQVLEG---------KLRLPDVMARR----------------TASKTRLKPF 830
Query: 237 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
P+VT+ N D YTVI + DRP LLF + ++ + + V T A F
Sbjct: 831 IVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVF 890
Query: 296 YIRHVDGLPISSEAERERVIQCL 318
Y+ + G I++ + + + L
Sbjct: 891 YVTDLLGAQITAPTRQAAIKRAL 913
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 849 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 908
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 909 IKRALIH 915
>gi|316932060|ref|YP_004107042.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
gi|315599774|gb|ADU42309.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
Length = 933
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 907 APTRQAAIKRALVHLLANGDAAEK 930
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 830 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 889
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 890 RARDVFYVTDLLGAQI 905
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 854 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 913
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 914 IKRALVH 920
>gi|50402114|sp|P62223.1|GLND_RHOPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 902
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 903 APTRQAAIKRALVHLLANGDAAEK 926
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 885
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 RARDVFYVTDLLGAQI 901
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 850 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 909
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 910 IKRALVH 916
>gi|39933668|ref|NP_945944.1| PII uridylyl-transferase [Rhodopseudomonas palustris CGA009]
gi|39647514|emb|CAE26035.1| Protein PII uridylyltransferase [Rhodopseudomonas palustris CGA009]
Length = 949
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 864 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 922
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 923 APTRQAAIKRALVHLLANGDAAEK 946
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 846 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 905
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 906 RARDVFYVTDLLGAQI 921
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 870 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 929
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 930 IKRALVH 936
>gi|192289024|ref|YP_001989629.1| PII uridylyl-transferase [Rhodopseudomonas palustris TIE-1]
gi|192282773|gb|ACE99153.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
TIE-1]
Length = 933
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 907 APTRQAAIKRALVHLLANGDAAEK 930
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 830 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 889
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 890 RARDVFYVTDLLGAQI 905
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 854 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 913
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 914 IKRALVH 920
>gi|429212269|ref|ZP_19203434.1| PII uridylyl-transferase [Pseudomonas sp. M1]
gi|428156751|gb|EKX03299.1| PII uridylyl-transferase [Pseudomonas sp. M1]
Length = 900
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ I +F + LS++ A+I+T+G +V+D FYVTD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVTDAHNQPLSDPDL 873
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I+ A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIQDARIITSTSLFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDADGGSIGDNPQRIAEIRQGLVDALKNPDDYPNIIQRRVPRQLKHFAFAPLV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V +VTD +
Sbjct: 807 STDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVTD-AHN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLSDPDLCKRLQA 879
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPNIIQRRVPRQLKHFAFAPLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF V D + + D ++ +Q L
Sbjct: 841 SVRNAKIATLGERVEDVFYVTDAHNQPLSDPDLCKRLQAAL 881
>gi|414589019|tpg|DAA39590.1| TPA: hypothetical protein ZEAMMB73_464424 [Zea mays]
Length = 295
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE- 310
TV+T+ D+ L D+ + V G ++T Y F++ P++ +
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 311 -RERVIQCLEAAIE---------RRASEGLE-----------LELCTEDRVGLLSDITRI 349
++R++Q A A+ GL+ L+LC DR+GLL D+TR+
Sbjct: 83 LKDRLLQLCPVAPPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLLHDVTRV 142
Query: 350 FRENSLSIKRAEISTIG-GKVKDTFYVTDVTG 380
E L+I+R ++ST G V D F++TD G
Sbjct: 143 LCELELTIRRVKVSTTPDGSVLDLFFITDARG 174
>gi|110678517|ref|YP_681524.1| PII uridylyl-transferase [Roseobacter denitrificans OCh 114]
gi|109454633|gb|ABG30838.1| protein-P-II uridylyltransferase [Roseobacter denitrificans OCh
114]
Length = 935
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F +D PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 750 FVMSDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAFWIQDADGNPY-DATRLPRL 808
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L G + + S + RER I FD+ E
Sbjct: 809 RKMIERTLMG--EVVTTEAIKSRDKVKKRERAFKVPTHITFDNEGSE------------- 853
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL D+ TL + + + ++ T + FY+
Sbjct: 854 ------------IYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 901
Query: 298 RHVDGLPISSEAERERVIQCLEAAIER 324
+ + GL S +++ + + L AAIE+
Sbjct: 902 KDMFGLKYYSASKQRNLERRLRAAIEQ 928
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R E+++ I A I+T G +V DTFYV D+ G
Sbjct: 858 IEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFG 906
>gi|402490590|ref|ZP_10837379.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
gi|401810616|gb|EJT02989.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
Length = 968
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ + + KA
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVIATRARHRKKNKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|302784983|ref|XP_002974263.1| hypothetical protein SELMODRAFT_101399 [Selaginella moellendorffii]
gi|302807877|ref|XP_002985632.1| hypothetical protein SELMODRAFT_122627 [Selaginella moellendorffii]
gi|300146541|gb|EFJ13210.1| hypothetical protein SELMODRAFT_122627 [Selaginella moellendorffii]
gi|300157861|gb|EFJ24485.1| hypothetical protein SELMODRAFT_101399 [Selaginella moellendorffii]
Length = 210
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 30/200 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVID + TV++V ++ G LL ++ L D+ L + K + G + F++
Sbjct: 8 PIVVIDQDADPHTTVVEVSFGDRLGALLDTMKSLRDLGLTVVKGNVKMVGNTRRNRFSIT 67
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEH-----TSIEF 121
D G+K+ D E+++ I+ + ++S ++ + G+ P ++ +I+
Sbjct: 68 RADNGRKVEDPELLESIRLTIIDNLLKYHPESSARLAMGEAFGIKPPKKQEIQTFITIKE 127
Query: 122 TGT----------DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
G+ D+PGL E+ ++ D+ +V +AE+ T A HV+ G A+
Sbjct: 128 DGSDKSLLTIETADKPGLMIEILKIINDISVSVESAEMDTEGLIAKDKFHVS--YGGKAL 185
Query: 172 KDPKRLSTIKELLFNVLRGY 191
++ ++L N LR Y
Sbjct: 186 S-----KSLSQVLTNCLRYY 200
>gi|86747159|ref|YP_483655.1| PII uridylyl-transferase [Rhodopseudomonas palustris HaA2]
gi|86570187|gb|ABD04744.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris HaA2]
Length = 932
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 847 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 905
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 906 APTRQAAIKRALVHLLANGD 925
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 829 AKLRAFVVEPEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 888
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 889 RARDVFYVTDLLGAQI 904
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 853 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 912
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 913 IKRALVH 919
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 37/222 (16%)
Query: 104 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 162
L +VG T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 726 LAVNVGFDEARGVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISI 785
Query: 163 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 217
+ D G +R + I E++ VL G L P + R
Sbjct: 786 SREYDRDEDEG------RRATRIGEMIEEVLEG---------KLRLPEAVAR-------- 822
Query: 218 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 276
R ++ P+V++ N D YTVI + DRP LL+ + ++ +
Sbjct: 823 -------RATNGRAKLRAFVVEPEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLN 875
Query: 277 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+ V T A FY+ + G I++ + + + L
Sbjct: 876 LNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAAIKRAL 917
>gi|308048667|ref|YP_003912233.1| UTP-GlnB uridylyltransferase, GlnD [Ferrimonas balearica DSM 9799]
gi|307630857|gb|ADN75159.1| UTP-GlnB uridylyltransferase, GlnD [Ferrimonas balearica DSM 9799]
Length = 858
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 246 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH--GMVNTGRTEAYQEFYIRHVDGL 303
++ + T + + DRP L F +V D + V H + T A F I DG
Sbjct: 670 HVTRGGTELLVYGPDRPGL-FAMVMAQLDAKRVSVHDAQIFTTRDGYALDSFVILEHDGH 728
Query: 304 PISSEAERERVIQCLEAAIE---------RRASEGLE--------------------LEL 334
PI + R+ L A+ R S L +EL
Sbjct: 729 PIQDPSRINRLRHSLNTALTKGTLTARPLRPLSRKLRSFRVPTRVQFLSSQRKNCTMMEL 788
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 394
T DR GLL+ I ++F LSI+ A+I+T+G K +D F + + G + P D++ R
Sbjct: 789 VTLDRPGLLAQIAQVFDRCELSIQAAKITTVGEKAEDFFMLCNPEGQALSPAEQDTLSRA 848
Query: 395 I 395
+
Sbjct: 849 L 849
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 46/258 (17%)
Query: 85 EVIDYIQQRLETD--ASFAPS----------------LRSSVGVMPTEEHTSIEFTGTDR 126
E ID + QRL D F+P+ + + T T + G DR
Sbjct: 626 EQIDALWQRLSADYFLRFSPAQIQWHSEMLLGRDLEAYQVHLSTHVTRGGTELLVYGPDR 685
Query: 127 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186
PGLF+ V A L +V +A+I+T D A V G+ I+DP R++ ++ L
Sbjct: 686 PGLFAMVMAQLDAKRVSVHDAQIFTTRDGYALDSFVILEHDGHPIQDPSRINRLRHSLNT 745
Query: 187 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 246
L K +L+ + R+L R + RV+ SS+
Sbjct: 746 AL--------TKGTLTARPLRPLSRKL-----------RSFRVPTRVQFLSSQ------- 779
Query: 247 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 306
K+ T++ + + DRP LL I + + + T +A F + + +G +S
Sbjct: 780 -RKNCTMMELVTLDRPGLLAQIAQVFDRCELSIQAAKITTVGEKAEDFFMLCNPEGQALS 838
Query: 307 SEAERERVIQCLEAAIER 324
AE++ + + L A+E+
Sbjct: 839 P-AEQDTLSRALVGALEQ 855
>gi|334345822|ref|YP_004554374.1| UTP-GlnB uridylyltransferase GlnD [Sphingobium chlorophenolicum
L-1]
gi|334102444|gb|AEG49868.1| UTP-GlnB uridylyltransferase, GlnD [Sphingobium chlorophenolicum
L-1]
Length = 919
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 87/224 (38%), Gaps = 31/224 (13%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + D PGLF + + N+++A I T D A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
P +LS I++ + + L NR R + ++ + R R
Sbjct: 783 HSPDQLSRIRKAIEDSL------------------ANRHRMITKL--EARPLPRTRAEAF 822
Query: 232 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R+E P V + N + +TVI + ++DRP LLF + L + V V T
Sbjct: 823 RIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGER 877
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLE-AAIERRASEGLELE 333
A FY+ + I S+A +Q LE +E E ELE
Sbjct: 878 AVDTFYVTDLLAGKIESKAR----LQTLERRLLEAAGGEVAELE 917
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI K + +++RL
Sbjct: 886 DLLAGKIESKARLQTLERRL 905
>gi|217978933|ref|YP_002363080.1| PII uridylyl-transferase [Methylocella silvestris BL2]
gi|217504309|gb|ACK51718.1| UTP-GlnB uridylyltransferase, GlnD [Methylocella silvestris BL2]
Length = 937
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 29/219 (13%)
Query: 106 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
+ + + P T + D P L S + A N+V+A+++T D A V
Sbjct: 730 THIDIEPLRGVTELTVIAPDSPHLLSIIAGACAASSANIVDAQVFTTTDGMALDTIVVSR 789
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
+ + +R S I + N L G +I D R
Sbjct: 790 EFDFDEDELRRASRIAFAVENALAG------------------------EITLTDMVAAR 825
Query: 226 VEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 284
V A R + P+VT+ N + +TV+ + DRP LLFD+ ++++ + +
Sbjct: 826 VGSAGARQKTFKVHPEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHI 885
Query: 285 NTGRTEAYQEFYIRHVDGL----PISSEAERERVIQCLE 319
T +A FY+ +G P+ EA R +++ +
Sbjct: 886 ATFGEKAADVFYVSDNEGTKITEPVRQEAVRRKILHIFD 924
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ DR GLL D+T E L+I A I+T G K D FYV+D G + +P ++
Sbjct: 855 VEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVSDNEGTKITEPVRQEA 914
Query: 391 IRRQIGHTKLQVKRSTILAPKPPKE 415
+RR+I H Q K + APK ++
Sbjct: 915 VRRKILHIFDQPKGES--APKSARK 937
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN+ TV++V +++ G+L + +++++L I A+I++ G DVF V
Sbjct: 840 PEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVS 899
Query: 75 DCDGKKI 81
D +G KI
Sbjct: 900 DNEGTKI 906
>gi|154244241|ref|YP_001415199.1| PII uridylyl-transferase [Xanthobacter autotrophicus Py2]
gi|154158326|gb|ABS65542.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
Length = 969
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT +E +G DRPGL + L+ L+ N+ +A + T +RA V +VTD G I
Sbjct: 879 SNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVTD-LMGAKIT 937
Query: 173 DPKRLSTIKELLFNVLRG 190
R STI+ L V G
Sbjct: 938 GAARQSTIRRALVAVFEG 955
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV++V +++ G+L + L+ +NL I A++++ G +DVF V
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 75 DCDGKKI 81
D G KI
Sbjct: 930 DLMGAKI 936
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 240 PQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P+VTV N + +TV+ + DRP LLF + TL+ + + V T A FY+
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEG 329
+ G I+ A + + + L A E RRA+ G
Sbjct: 930 DLMGAKITGAARQSTIRRALVAVFEGPAEDEEAPRRAARG 969
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDS- 390
+E+ DR GLL +T +L+I A ++T G + D FYVTD+ G + S
Sbjct: 885 VEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVTDLMGAKITGAARQST 944
Query: 391 IRRQI 395
IRR +
Sbjct: 945 IRRAL 949
>gi|190890057|ref|YP_001976599.1| PII uridylyl-transferase [Rhizobium etli CIAT 652]
gi|190695336|gb|ACE89421.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CIAT 652]
Length = 968
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ + KA
Sbjct: 810 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTRNRKKSKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|406833391|ref|ZP_11092985.1| protein-P-II uridylyltransferase [Schlesneria paludicola DSM 18645]
Length = 915
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVV+DN + TVI V + ++ G+L + + L + NL + A I++ +DVF V
Sbjct: 820 PMRVVVDNESSDRYTVIDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFV 879
Query: 74 IDCDGKKIRDKE 85
+ DG+K+RD E
Sbjct: 880 TESDGRKVRDGE 891
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T I+ DRPGL + L + + +V A+I TH D+ V VT+ S G ++
Sbjct: 830 SDRYTVIDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFVTE-SDGRKVR 888
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTS 200
D +RL ++++ L L+ DF K+ +
Sbjct: 889 DGERLKSLRDFLTLQLQ---DFEKSAAT 913
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ DR GLL ITR E +LS+ A+I+T +V D F+VT+ G V D + + S
Sbjct: 836 IDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFVTESDGRKVRDGERLKS 895
Query: 391 IR 392
+R
Sbjct: 896 LR 897
>gi|399035066|ref|ZP_10732590.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
gi|398067164|gb|EJL58707.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
Length = 969
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 871 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 916
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI I RL+
Sbjct: 909 TDLVGQKISGDSKRSNITARLKA 931
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFKDDA-DELR 810
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ + KA
Sbjct: 811 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTKNRKKSKAF----- 846
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 847 -VIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 905
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + L+A + E
Sbjct: 906 FYVTDLVGQKISGDSKRSNITARLKAVMAEEQDE 939
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 859 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 918
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
D KR + L + D+ R+ P GI+
Sbjct: 919 DSKRSNITARLKAVMAEEQDELRERM----PSGII 949
>gi|424898000|ref|ZP_18321574.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182227|gb|EJC82266.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 968
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ + + KA
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVIATRARHRKKNKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|424879748|ref|ZP_18303380.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516111|gb|EIW40843.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 968
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 177 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
+ + + D+ R+ A T+ +PP
Sbjct: 922 ANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|417110224|ref|ZP_11963559.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
gi|327188578|gb|EGE55788.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
Length = 968
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ + KA
Sbjct: 810 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTRNRKKSKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|86356044|ref|YP_467936.1| PII uridylyl-transferase [Rhizobium etli CFN 42]
gi|86280146|gb|ABC89209.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CFN 42]
Length = 944
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 846 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 891
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 884 TDLVGQKI 891
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 34/244 (13%)
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
D+I+Q + + A +R+ TE I D P L + + A N+V+A
Sbjct: 702 DFIRQADKAGQALATMVRTDSFHAITE----ITVLSPDHPRLLAVIAGACAAAGANIVDA 757
Query: 148 EIWTHND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGI 206
+I+T +D RA +HV+ A + +R TI ++ NVL G P I
Sbjct: 758 QIFTTSDGRALDTIHVSREFADDA-DELRRAGTIGRMIENVLAGRKRL--------PEVI 808
Query: 207 MNRER-RLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKL 264
R R R FD P V + N + +TVI + DRP L
Sbjct: 809 ATRTRNRKKSKAFD------------------IPPSVNITNSLSNKFTVIEVECLDRPGL 850
Query: 265 LFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
L +I L+D+ + + T + FY+ + G IS +++R + ++A +
Sbjct: 851 LSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAE 910
Query: 325 RASE 328
E
Sbjct: 911 EQDE 914
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 834 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 893
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
D KR + + + D+ R+ P GI+
Sbjct: 894 DSKRANITARMKAVMAEEQDELRERM----PSGII 924
>gi|398998506|ref|ZP_10701279.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
gi|398120211|gb|EJM09878.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
Length = 900
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LEL DR GLL+ I IF E LS+K A+I+T+G +V+D F++TD + + DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITDANNHQLSDPLLCSR 876
Query: 391 IRRQI 395
++ I
Sbjct: 877 LQDAI 881
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ + IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP S +++ + + L
Sbjct: 866 HQLSDPLLCSRLQDAIVDQL 885
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSS 107
+K A I++ G DVF + D + ++ D + +Q + + S P ++ S
Sbjct: 841 SLKNAKIATLGERVEDVFFITDANNHQLSDPLLCSRLQDAIVDQLSVSHEPDIKLS 896
>gi|150395259|ref|YP_001325726.1| PII uridylyl-transferase [Sinorhizobium medicae WSM419]
gi|166232254|sp|A6U5G1.1|GLND_SINMW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150026774|gb|ABR58891.1| metal dependent phosphohydrolase [Sinorhizobium medicae WSM419]
Length = 949
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV DTFYVTD+ G+ +
Sbjct: 852 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKI 897
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 831 PEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI + I RL+
Sbjct: 891 DLVGSKITSENRQMNIAARLKA 912
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I R
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENR 902
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
I L VL G D + + P GI+
Sbjct: 903 QMNIAARLKAVLAGEVDEARERM---PSGII 930
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 26/216 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V A+I T +D A + + A + +R
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G P I +R R + R
Sbjct: 793 AASIGKLIEDVLSGRKKL--------PDVIASRTR-----------------SKKRSRAF 827
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 828 TVTPEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 887
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
Y+ + G I+SE + + L+A + E E
Sbjct: 888 YVTDLVGSKITSENRQMNIAARLKAVLAGEVDEARE 923
>gi|116250174|ref|YP_766012.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. viciae 3841]
gi|6572661|gb|AAF17352.1|AF155830_1 putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
leguminosarum bv. viciae]
gi|115254822|emb|CAK05896.1| putative [Protein-PII] uridylyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 968
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 177 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
+ + + D+ R+ A T+ +PP
Sbjct: 922 ANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|424888942|ref|ZP_18312545.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174491|gb|EJC74535.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 968
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R ++
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRRKN 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|424873391|ref|ZP_18297053.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169092|gb|EJC69139.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 968
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 32/216 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + + A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMRAVMAEEEDE 938
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 177 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
+ + + D+ R+ A T+ +PP
Sbjct: 922 ANITARMRAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|424915802|ref|ZP_18339166.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851978|gb|EJB04499.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 968
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|12229842|sp|Q9RAE4.2|GLND_RHILV RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 944
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 840 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 891
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 884 TDLVGQKI 891
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 727 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 785
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 786 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 818
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 819 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 878
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 879 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 914
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 838 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 897
Query: 177 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
+ + + D+ R+ A T+ +PP
Sbjct: 898 ANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 935
>gi|409435802|ref|ZP_11263010.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
gi|408752560|emb|CCM74157.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
Length = 969
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 871 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 916
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI I RL+
Sbjct: 909 TDLVGQKISGDSKRSNITARLKA 931
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFKDDA-DELR 810
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ + KA
Sbjct: 811 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTKNRKKSKAF----- 846
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 847 -VIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 905
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + L+A + E
Sbjct: 906 FYVTDLVGQKISGDSKRSNITARLKAVMAEEQDE 939
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 859 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 918
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTS--LSPP 204
D KR + L + D+ R+ S ++PP
Sbjct: 919 DSKRSNITARLKAVMAEEQDELRERMPSGIIAPP 952
>gi|209547642|ref|YP_002279559.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533398|gb|ACI53333.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 968
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|241202799|ref|YP_002973895.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856689|gb|ACS54356.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 968
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|85375192|ref|YP_459254.1| PII uridylyl-transferase [Erythrobacter litoralis HTCC2594]
gi|122543574|sp|Q2N784.1|GLND_ERYLH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|84788275|gb|ABC64457.1| uridylyltransferase [Erythrobacter litoralis HTCC2594]
Length = 919
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 34/182 (18%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPIS 306
E+ T++T+ + D P L + I + + ++T R A + ++ G P +
Sbjct: 723 ERGATLVTVIAADHPGLFYRIAGGIHLAGGNIIDARIHTTRNGWAIDNYLVQDPVGQPFA 782
Query: 307 SEAERERVIQCLEAAIERR-------ASEGLE-------------------------LEL 334
E + R+ Q + AI R A L+ +E+
Sbjct: 783 EERQLARIEQAIADAIANRGELVPKLAKRPLKQTRAGAFDVRPRVLFDNDASGRFTVIEV 842
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRR 393
DR LL+ + R EN + ++ A I+ G + DTFYVTD+TG + D +D+IR+
Sbjct: 843 NARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVTDLTGAKITDESRMDTIRQ 902
Query: 394 QI 395
+
Sbjct: 903 AL 904
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN+ TVI+V++ ++ +L ++ + L + ++++ A+I++ G D F V
Sbjct: 825 PRVLFDNDASGRFTVIEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVT 884
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFA 101
D G KI D+ +D I+Q L AS A
Sbjct: 885 DLTGAKITDESRMDTIRQALLDAASDA 911
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 23/183 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKE 85
AT++ V + + G+ ++ ++ I A I ++ GW +D + V D G+ ++
Sbjct: 726 ATLVTVIAADHPGLFYRIAGGIHLAGGNIIDARIHTTRNGWAIDNYLVQDPVGQPFAEER 785
Query: 86 VIDYIQQRLETDASFAPSLRSSVGVMPTEE---------------------HTSIEFTGT 124
+ I+Q + + L + P ++ T IE
Sbjct: 786 QLARIEQAIADAIANRGELVPKLAKRPLKQTRAGAFDVRPRVLFDNDASGRFTVIEVNAR 845
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DR L + + L + V +A I + +RAA +VTD TG I D R+ TI++ L
Sbjct: 846 DRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVTD-LTGAKITDESRMDTIRQAL 904
Query: 185 FNV 187
+
Sbjct: 905 LDA 907
>gi|260752753|ref|YP_003225646.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552116|gb|ACV75062.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 926
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 38/236 (16%)
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
D WF + +VI + +QQ ++TD S S+ MP + T I
Sbjct: 695 DDYWFSERTDVIAAN------------MQQIIDTD-SKGQSISVRGHEMPPYDATMISLY 741
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
D PG F + + N+++A I T D A + +S G IK + L+ + +
Sbjct: 742 AIDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQ 801
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
+ + + +L PP + R + H VE P V
Sbjct: 802 AIEDAATSHIRSSNKLAALRPP-LFWRGKAFH------------------VE-----PLV 837
Query: 243 TVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
+ N D +TVI + ++DRP LL D+ C L + + + + T A FY+
Sbjct: 838 FIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYV 893
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN TVI+V++ ++ +L + L + L I A+I++ G +DVF V
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI ++ + I++RL
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
>gi|15964149|ref|NP_384502.1| PII uridylyl-transferase [Sinorhizobium meliloti 1021]
gi|334314799|ref|YP_004547418.1| UTP-GlnB uridylyltransferase GlnD [Sinorhizobium meliloti AK83]
gi|384528136|ref|YP_005712224.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|384534494|ref|YP_005718579.1| protein GlnD [Sinorhizobium meliloti SM11]
gi|407719238|ref|YP_006838900.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|418400279|ref|ZP_12973821.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|433612182|ref|YP_007188980.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
gi|7387710|sp|P56884.1|GLND_RHIME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|7188745|gb|AAF37852.1|AF227730_2 uridylyltransferase [Sinorhizobium meliloti]
gi|15073325|emb|CAC41833.1| Protein-PII uridylyltransferase [Sinorhizobium meliloti 1021]
gi|333810312|gb|AEG02981.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|334093793|gb|AEG51804.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti AK83]
gi|336031386|gb|AEH77318.1| GlnD [Sinorhizobium meliloti SM11]
gi|359505748|gb|EHK78268.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|407317470|emb|CCM66074.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|429550372|gb|AGA05381.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
Length = 949
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV DTFYVTD+ G+ +
Sbjct: 852 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKI 897
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 831 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI + I RL+
Sbjct: 891 DLVGSKITSENRQMNIAARLKA 912
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I R
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENR 902
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
I L VL G D + + P GI+
Sbjct: 903 QMNIAARLKAVLAGEVDEARERM---PSGII 930
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 26/216 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V A+I T +D A + + A + +R
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G P I +R R V+K R
Sbjct: 793 AASIGKLIEDVLSGRKRL--------PEVIASRTR--------------VKK---RSRAF 827
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 828 TVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 887
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
Y+ + G I+SE + + L+A + E E
Sbjct: 888 YVTDLVGSKITSENRQMNIAARLKAVLAGEVDEARE 923
>gi|337739621|ref|YP_004631349.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
gi|386028639|ref|YP_005949414.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336093707|gb|AEI01533.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336097285|gb|AEI05108.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
Length = 939
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL ++ ++ L N+ +A + T +R V +VTD G I
Sbjct: 855 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQIT 913
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
P R + IK L ++L D R A
Sbjct: 914 APTRQAAIKRALVHLLSNADPTRGA 938
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + SL+I A ++T G +V+D FYVTD+ G + P +
Sbjct: 861 IEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAA 920
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 921 IKRALVH 927
>gi|224100729|ref|XP_002311991.1| predicted protein [Populus trichocarpa]
gi|222851811|gb|EEE89358.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDV 70
NP V +DN T++K+ + G++ + + L D N+ I + S G +D+
Sbjct: 232 NPVSVTVDNAFSPSHTLVKILCKDHKGLIYDITRTLKDYNIQISYGRFLASRKGNCEVDL 291
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F ++ DGKKI D + + RL + P + V P E +E +G RP
Sbjct: 292 F-LMQADGKKIVDPNKQNALCSRLRMEL-LCPLRLAVVSRGPDTELLVANPVELSGRGRP 349
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 185
+F ++ L +L+ + + EI H +DR V + G + K I+E +
Sbjct: 350 LVFHDITLALKNLNTPIFSVEIGRHMIHDREWEVYRILLEGDGLPVSRNK----IEEGVR 405
Query: 186 NVLRGYD 192
VL G++
Sbjct: 406 KVLMGWE 412
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD 377
C+ D GLL D+T + E L+I+R ++ST G+V D FY+TD
Sbjct: 116 CSYDYEGLLHDVTEVLCELELTIERVKVSTAPDGRVMDLFYITD 159
>gi|452747344|ref|ZP_21947141.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
gi|452008865|gb|EME01101.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQF 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALVKELQQENEQQPSPSSI 898
>gi|392420714|ref|YP_006457318.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
gi|390982902|gb|AFM32895.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQF 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPKRIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALVKELQQENEQQPSPSSI 898
>gi|418295712|ref|ZP_12907562.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379067045|gb|EHY79788.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDAHNQPLSDPQF 873
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+T T++++ + ++ G+L +V Q+ D +L
Sbjct: 781 DDYLNIIQRRVPRQLKHFAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF V D + + D + +QQ L
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDAHNQPLSDPQFCLRLQQAL 881
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG I R +E+ ++ IQ+R+ FA + ++
Sbjct: 749 YIVLDVDGSPIGNNPERIEEIRRGLITALRNPDDYLNIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-AHNQP 867
Query: 171 IKDPKRLSTIKELLFNVLR 189
+ DP+ +++ L L+
Sbjct: 868 LSDPQFCLRLQQALVKELQ 886
>gi|357406291|ref|YP_004918215.1| [protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
gi|351718956|emb|CCE24630.1| [Protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
Length = 878
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+EL T D GLLS I + ++++ + A+I+TIG + +D FY TD NP+
Sbjct: 806 MELITTDHAGLLSKIGHVLNDHNIQLHDAKITTIGSRAEDMFYFTDYQSNPI 857
>gi|227820619|ref|YP_002824589.1| PII uridylyl-transferase [Sinorhizobium fredii NGR234]
gi|227339618|gb|ACP23836.1| [Protein-PII] uridylyltransferase [Sinorhizobium fredii NGR234]
Length = 965
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I A I+T G KV DTFYVTD+ G +
Sbjct: 868 DRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKI 913
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L ++ VL+D++L I A+I++ G +D F V
Sbjct: 847 PEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVT 906
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 907 DLVGAKITNENRQGNIAARLKA 928
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DR GL SE+ AVL+DL ++ +A I T ++ +VTD G I + R
Sbjct: 860 TVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKITNENR 918
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
I L VL G D + + P GI+
Sbjct: 919 QGNIAARLKAVLAGEVDEARERM---PSGII 946
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 26/216 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V+A+I T +D A + + + +R
Sbjct: 749 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTSDGRALDTILVNREFSVDEDEMRR 808
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G P I +R R A R +
Sbjct: 809 AASIGKLIEDVLSGRKRL--------PEVIASRTR-----------------AKKRSKAF 843
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL +I L+D+ + + T + F
Sbjct: 844 TVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTF 903
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
Y+ + G I++E + + L+A + E E
Sbjct: 904 YVTDLVGAKITNENRQGNIAARLKAVLAGEVDEARE 939
>gi|254459661|ref|ZP_05073077.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium
HTCC2083]
gi|206676250|gb|EDZ40737.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium
HTCC2083]
Length = 922
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 35/226 (15%)
Query: 107 SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT 163
++ + P E+ T + F D PG+FS + LA + NVV+A +T ND A A +
Sbjct: 720 AIDIHPDEDRDATRVCFALADHPGIFSRLSGALALVGANVVDARTFTSNDGYATAAFWIQ 779
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDD 220
D G + R+ +++++ L G + + I RER I FD+
Sbjct: 780 DGDDG--PYEEARIPRLRKMIEKTLSG--EVVATEAIRDRDKIKKRERAFRVPTHITFDN 835
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
E YT+I + ++DRP LL D+ L M +
Sbjct: 836 EGSEI-------------------------YTIIEVDTRDRPGLLHDLTRCLASMNVYIS 870
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
++ T + FY++ + GL + +++ + + + AI + A
Sbjct: 871 SAVIATYGEQVVDTFYVKDMFGLKYHAASKQRTLEKKMREAISKGA 916
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQVVDTFYVKDMFG 892
>gi|209883288|ref|YP_002287145.1| PII uridylyl-transferase [Oligotropha carboxidovorans OM5]
gi|209871484|gb|ACI91280.1| protein-P-II uridylyltransferase [Oligotropha carboxidovorans OM5]
Length = 942
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL ++ ++ L N+ +A + T +R V +VTD G I
Sbjct: 858 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQIT 916
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
P R + IK L ++L D R A
Sbjct: 917 APTRQAAIKRALVHLLSNADPTRGA 941
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + SL+I A ++T G +V+D FYVTD+ G + P +
Sbjct: 864 IEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAA 923
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 924 IKRALVH 930
>gi|91775885|ref|YP_545641.1| PII uridylyl-transferase [Methylobacillus flagellatus KT]
gi|91709872|gb|ABE49800.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Methylobacillus
flagellatus KT]
Length = 856
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 42/64 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
L++ T DR GLLS I + +++ + + A+I+T+G +V+DTF + D +G + +++ ++
Sbjct: 789 LDIATNDRPGLLSRIAHVLQQHHIRLHTAKINTLGNRVEDTFLIADQSGQRLTAEVLAAL 848
Query: 392 RRQI 395
R +
Sbjct: 849 ERSL 852
>gi|421617884|ref|ZP_16058866.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
gi|409780129|gb|EKN59772.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQF 873
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRNGLITALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALVKELQQENEQQPSPSSI 898
>gi|421588176|ref|ZP_16033492.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
gi|403707146|gb|EJZ22223.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
Length = 899
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 801 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 846
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 779 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 838
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 839 TDLVGQKI 846
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ + + +
Sbjct: 682 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFPDDS-DELR 740
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R +TI ++ +VL G +RL +++ + KA
Sbjct: 741 RAATIGRMIEDVLSG-------------------RKRLPEVIATRTRNRKKSKAF----- 776
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 777 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 835
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + L+A + E
Sbjct: 836 FYVTDLVGQKISGDSKRANITARLKAVMAEEEDE 869
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 793 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 852
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ L + D+ R+ P GI+
Sbjct: 853 ANITARLKAVMAEEEDELRERM----PSGII 879
>gi|298290064|ref|YP_003692003.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
gi|296926575|gb|ADH87384.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
Length = 932
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT +E +G DRPGL + L+ L+ N+ +A I T +RA V +VTD G I
Sbjct: 849 SNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVTD-LMGAKII 907
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
R S I+ L VL D+ A
Sbjct: 908 GAARHSAIRRALLQVLDADDEANAA 932
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N+ TV++V +++ G+L + Q L+ +NL I A+I++ G +DVF V
Sbjct: 840 PEVTLNNSWSNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVT 899
Query: 75 DCDGKKI 81
D G KI
Sbjct: 900 DLMGAKI 906
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DR GLL +T+ +L+I A I+T G + D FYVTD+ G KII +
Sbjct: 855 VEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVTDLMG----AKIIGAA 910
Query: 392 R 392
R
Sbjct: 911 R 911
>gi|431927945|ref|YP_007240979.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
gi|431826232|gb|AGA87349.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
Length = 900
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQF 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-RDKEVID------------------YIQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG I + E ID IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPERIDEIRKGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALIKELQQENEQQPSPSSI 898
>gi|118591469|ref|ZP_01548866.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
gi|118435797|gb|EAV42441.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
Length = 944
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
LE+ DR GLL D+TR +L+I A IST G KV D FYVTD+TG +
Sbjct: 855 LEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDLTGQKI 906
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++++T +E +G DRPGL ++ +A L+ N+ +A I T ++ V +VTD TG I
Sbjct: 849 SDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTD-LTGQKIA 907
Query: 173 DPKRLSTIKELLFNVLRGY 191
+ R I+E L + + G+
Sbjct: 908 NIGRQEIIRERLADAVEGH 926
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V+++N D TV+++ +++ G+L + + + +NL I A+IS+ G +DVF V D
Sbjct: 842 VLVNNALSDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 901
Query: 77 DGKKIRDKEVIDYIQQRL 94
G+KI + + I++RL
Sbjct: 902 TGQKIANIGRQEIIRERL 919
>gi|238007756|gb|ACR34913.1| unknown [Zea mays]
gi|414589017|tpg|DAA39588.1| TPA: hypothetical protein ZEAMMB73_464424 [Zea mays]
Length = 428
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 300
Q+ + + TV+T+ D+ L D+ + V G ++T Y F++
Sbjct: 12 QIRHADAAGEPTVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPR 71
Query: 301 DGLPISSEAE--RERVIQCLEAA---------IERRASEGLE-----------LELCTED 338
P++ + ++R++Q A A+ GL+ L+LC D
Sbjct: 72 GRRPVAVPWDLLKDRLLQLCPVAPPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFD 131
Query: 339 RVGLLSDITRIFRENSLSIKRAEISTIG-GKVKDTFYVTDVTG 380
R+GLL D+TR+ E L+I+R ++ST G V D F++TD G
Sbjct: 132 RMGLLHDVTRVLCELELTIRRVKVSTTPDGSVLDLFFITDARG 174
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G+L V++++ D N+ I + Y S +G +D+F V
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCEIDLFAVQ 314
Query: 75 DCDGKKIRDKE 85
DGKKI D+
Sbjct: 315 S-DGKKILDQH 324
>gi|226528888|ref|NP_001143395.1| uncharacterized protein LOC100276033 [Zea mays]
gi|195619682|gb|ACG31671.1| hypothetical protein [Zea mays]
Length = 277
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D F +
Sbjct: 71 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMSALKNLGLNVVKASVCLDSTGKHIKFAIT 130
Query: 75 DC-DGKKIRDKEVIDYIQ---------------QRLETDASFAPSLRSSVGVMPTEE--- 115
G+KI D E+++ ++ +L A+F P PTEE
Sbjct: 131 RAFTGRKIDDPELLEAVRLTIINNMIQYHPESSSQLAMGATFGPE-------APTEEVDV 183
Query: 116 ----HTSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
H I G DRPGL ++ +++D+ NV + E T A A H
Sbjct: 184 DIATHIDIYDDGPERSLLVVETADRPGLLVDLVKIISDISINVQSGEFDTEGLLAKAKFH 243
Query: 162 VT 163
V+
Sbjct: 244 VS 245
>gi|338741595|ref|YP_004678557.1| [protein-PII] uridylyltransferase [Hyphomicrobium sp. MC1]
gi|337762158|emb|CCB67993.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Hyphomicrobium sp.
MC1]
Length = 932
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
LE+ DR GLL ++T + SL I A ++T G K D FYVTD+ G ++I+
Sbjct: 850 LEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTDLLGK----QVINET 905
Query: 392 RRQIGHTKLQVKRSTILAPKPPKETT 417
R+ ++L+ +IL P PK T
Sbjct: 906 RQATLRSRLR----SILDPARPKSAT 927
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVI+N TV++V ++ G+L ++ L+D++L I A++++ G +DVF V
Sbjct: 835 PEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVT 894
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D GK++ ++ ++ RL +
Sbjct: 895 DLLGKQVINETRQATLRSRLRS 916
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E +G DRPGL E+ + L+DL ++ +A + T ++A V +VTD G + + R
Sbjct: 848 TVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTD-LLGKQVINETR 906
Query: 177 LSTIKELLFNVL 188
+T++ L ++L
Sbjct: 907 QATLRSRLRSIL 918
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 233 VEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 291
VE + P+V + N D TV+ + +DRP LL+++ L+D+ + V T +A
Sbjct: 828 VEAFTVEPEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKA 887
Query: 292 YQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 328
FY+ + G + +E R R+ L+ A + A+E
Sbjct: 888 VDVFYVTDLLGKQVINETRQATLRSRLRSILDPARPKSATE 928
>gi|254501628|ref|ZP_05113779.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
gi|222437699|gb|EEE44378.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
Length = 945
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
LE+ DR GLL D+TR +L+I A IST G KV D FYVTD+TG KI +
Sbjct: 856 LEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDLTGQ----KIANIG 911
Query: 392 RRQIGHTKLQ--VKRSTILAPKPP 413
R++I +L V+ L P P
Sbjct: 912 RQEIIRERLSAAVEGQVELDPAAP 935
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V+++N D TV++V +++ G+L + + + +NL I A+IS+ G +DVF V D
Sbjct: 843 VLLNNTLSDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 902
Query: 77 DGKKIRDKEVIDYIQQRL 94
G+KI + + I++RL
Sbjct: 903 TGQKIANIGRQEIIRERL 920
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++++T +E +G DRPGL ++ +A L+ N+ +A I T ++ V +VTD TG I
Sbjct: 850 SDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTD-LTGQKIA 908
Query: 173 DPKRLSTIKELLFNVLRG 190
+ R I+E L + G
Sbjct: 909 NIGRQEIIRERLSAAVEG 926
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D P L S + N+V+A+I T D G+A
Sbjct: 743 TELTILAQDHPRLLSVIAGACYSTGANIVDAQIDTTTD-------------GFA------ 783
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK---AVGRV 233
L TI + L G DD R+ ++ ++ R R D++ E V K GR+
Sbjct: 784 LDTI--FIGRELPGDDDERRRGERIT--ALIERTLR-----GDEQIPEPVAKKGSVRGRM 834
Query: 234 EDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
+ +V + N + DYTV+ + DRP LL+D+ ++ + + ++T +
Sbjct: 835 KAFKVASEVLLNNTLSDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVV 894
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIE 323
FY+ + G I++ +E + + L AA+E
Sbjct: 895 DVFYVTDLTGQKIANIGRQEIIRERLSAAVE 925
>gi|352086340|ref|ZP_08953881.1| UTP-GlnB uridylyltransferase, GlnD [Rhodanobacter sp. 2APBS1]
gi|351679639|gb|EHA62776.1| UTP-GlnB uridylyltransferase, GlnD [Rhodanobacter sp. 2APBS1]
Length = 877
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V VL+ + V++ +SS G +D F +
Sbjct: 684 PLVAVHPLSVRGSTELFVYTPDRDGLFATVTAVLDRLRFSVMESRILSSPTGMALDTFLL 743
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------------------- 114
+D D ++ + +QQRL+ +L S GV P++
Sbjct: 744 LDADSQQPVSAARAEELQQRLQR------ALVQSAGVQPSKRGLSRHQKHFQMTPQISFH 797
Query: 115 ---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T + GTDRPGL + V V+ V +A I T +R +TD
Sbjct: 798 AAGDRTQLALVGTDRPGLLAAVAQVMLATGVRVHDARIATFGERVEDFFQLTD 850
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
A + +L L DR GLL+ + ++ + + A I+T G +V+D F +TD P+D
Sbjct: 799 AGDRTQLALVGTDRPGLLAAVAQVMLATGVRVHDARIATFGERVEDFFQLTDRHNAPLDA 858
Query: 386 ----KIIDSIRRQIGHTK 399
+++ ++ +IG +
Sbjct: 859 AQQDRLLHALLERIGPAR 876
>gi|218508896|ref|ZP_03506774.1| PII uridylyl-transferase [Rhizobium etli Brasil 5]
Length = 227
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 124 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 175
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 108 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 167
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 168 TDLVGQKI 175
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 11 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 69
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G R+R I R+ ++ + V
Sbjct: 70 RAGTIGRMIEDVLSG------------------RKRLPEVIATRTRNRKKSKAFV----- 106
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 107 --IPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 164
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 165 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 198
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 118 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 177
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
D KR + + + D+ R+ A T SPP
Sbjct: 178 DSKRANITARMKAVMAEEEDELRERMPSGIIAPAATRTSPPA 219
>gi|226494031|ref|NP_001150201.1| LOC100283831 [Zea mays]
gi|195637534|gb|ACG38235.1| amino acid binding protein [Zea mays]
gi|414589018|tpg|DAA39589.1| TPA: amino acid binding protein [Zea mays]
Length = 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE- 310
TV+T+ D+ L D+ + V G ++T Y F++ P++ +
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 311 -RERVIQCLEAA---------IERRASEGLE-----------LELCTEDRVGLLSDITRI 349
++R++Q A A+ GL+ L+LC DR+GLL D+TR+
Sbjct: 83 LKDRLLQLCPVAPPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLLHDVTRV 142
Query: 350 FRENSLSIKRAEISTI-GGKVKDTFYVTDVTG 380
E L+I+R ++ST G V D F++TD G
Sbjct: 143 LCELELTIRRVKVSTTPDGSVLDLFFITDARG 174
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G+L V++++ D N+ I + Y S +G +D+F V
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCEIDLFAV- 313
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL + P + V P E +E +G RP +F
Sbjct: 314 QSDGKKILDQHRQRALCCRLRMELR-RPLHVALVNRGPDTELLVANPVEVSGKGRPLVFY 372
Query: 132 EVCAVLADLHCNVVNAEIWTH 152
++ L +L + AEI H
Sbjct: 373 DITLALKNLQRRIFLAEIGRH 393
>gi|83647919|ref|YP_436354.1| PII uridylyl-transferase [Hahella chejuensis KCTC 2396]
gi|83635962|gb|ABC31929.1| protein-P-II uridylyltransferase [Hahella chejuensis KCTC 2396]
Length = 906
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ T DR GLL+ I I E+ + + A I+T+G +V+D F +TDV G P+ DP++ +
Sbjct: 830 MEIITPDRPGLLARIGSILLEHEVELVTARIATLGERVEDVFVLTDVDGAPLSDPELCRT 889
Query: 391 IRRQI 395
+R I
Sbjct: 890 LRDDI 894
>gi|168008130|ref|XP_001756760.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691998|gb|EDQ78357.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 35/211 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ++AT++++ ++ G LL I+ L D+ L + + ++++G ++
Sbjct: 7 PIVLIDQESDSEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGSRLRRKKFLV 66
Query: 75 --DCDGKKIRDKEVIDYIQ---------------QRLETDASFAPSLRSSVGVMPTEEHT 117
+ KK+ D E+++ I+ ++L +F+ + + + H
Sbjct: 67 TRSANNKKVEDPELLEAIRLTIINNLLQYHPESSEQLAMGVAFSDTPPKNQIDVDVATHV 126
Query: 118 SIEFTGT---------DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G+ DRPGL E+ V+ D+ V +AEI T A +VT H
Sbjct: 127 TVTREGSRSLLLVETADRPGLLLEILKVICDISIFVESAEIDTEGLIAKDKFYVTYHGDV 186
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ +++E+L N LR Y R+ +T
Sbjct: 187 LS-------KSMEEVLTNALRYY--LRRPET 208
>gi|389798397|ref|ZP_10201414.1| PII uridylyl-transferase [Rhodanobacter sp. 116-2]
gi|388445005|gb|EIM01093.1| PII uridylyl-transferase [Rhodanobacter sp. 116-2]
Length = 863
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V VL+ + V++ +SS G +D F +
Sbjct: 670 PLVAVHPLSVRGSTELFVYTPDRDGLFATVTAVLDRLRFSVMESRILSSPTGMALDTFLL 729
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------------------- 114
+D D ++ + +QQRL+ +L S GV P++
Sbjct: 730 LDADSQQPVSAARAEELQQRLQR------ALVQSAGVQPSKRGLSRHQKHFQMTPQISFH 783
Query: 115 ---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T + GTDRPGL + V V+ V +A I T +R +TD
Sbjct: 784 AAGDRTQLALVGTDRPGLLAAVAQVMLATGVRVHDARIATFGERVEDFFQLTD 836
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
A + +L L DR GLL+ + ++ + + A I+T G +V+D F +TD P+D
Sbjct: 785 AGDRTQLALVGTDRPGLLAAVAQVMLATGVRVHDARIATFGERVEDFFQLTDRHNAPLDA 844
Query: 386 ----KIIDSIRRQIGHTK 399
+++ ++ +IG +
Sbjct: 845 AQQDRLLHALLERIGPAR 862
>gi|182680031|ref|YP_001834177.1| PII uridylyl-transferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635914|gb|ACB96688.1| UTP-GlnB uridylyltransferase, GlnD [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 953
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID-S 390
+E+ DR GLL D+TRI + +L+I A I T G +V D FYVTD+ G + +
Sbjct: 868 IEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVTDLHGAKITTAARQTA 927
Query: 391 IRRQI 395
+RRQI
Sbjct: 928 VRRQI 932
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN+ + TVI+V +++ G+L + ++L+ NL I A+I + G +DVF V
Sbjct: 853 PEVSIDNSLSSRFTVIEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVT 912
Query: 75 DCDGKKI 81
D G KI
Sbjct: 913 DLHGAKI 919
>gi|125540993|gb|EAY87388.1| hypothetical protein OsI_08795 [Oryza sativa Indica Group]
Length = 223
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 17/115 (14%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-------MP 112
I SDG WF+ + + T AS S R S+G+ M
Sbjct: 58 IWSDGRWFIRSWTSSMSPTASVASSP----------TTASSPTSSRLSLGMWNGPTRPMA 107
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
E T++E TG R GL SEV AVLAD+ C VV W H ++ + + T
Sbjct: 108 LEGLTALELTGAGRTGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNEET 162
>gi|254448782|ref|ZP_05062239.1| protein-P-II uridylyltransferase [gamma proteobacterium HTCC5015]
gi|198261623|gb|EDY85911.1| protein-P-II uridylyltransferase [gamma proteobacterium HTCC5015]
Length = 885
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ T DR GLL+ I + F E + A+I+TIG +V D F+VTD P+ DP +I+
Sbjct: 812 VEVMTADRPGLLARIGQAFIETDTRLHNAKINTIGEQVDDIFFVTDDDNQPLSDPNVIEH 871
Query: 391 IRRQIGH 397
+++ H
Sbjct: 872 FTQRLQH 878
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
R+ I++ + TV++V + ++ G+L ++ Q + + + A I++ G D+F V D
Sbjct: 798 RIHINSTSDNRFTVVEVMTADRPGLLARIGQAFIETDTRLHNAKINTIGEQVDDIFFVTD 857
Query: 76 CDGKKIRDKEVIDYIQQRLE 95
D + + D VI++ QRL+
Sbjct: 858 DDNQPLSDPNVIEHFTQRLQ 877
>gi|329847428|ref|ZP_08262456.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
gi|328842491|gb|EGF92060.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
Length = 948
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDGKKIR- 82
+AT + + ++ G+ + + ++ N+V + + SS G +DVF V D G
Sbjct: 745 NATAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGH-ALDVFYVQDSQGLPFGH 803
Query: 83 -DKEVIDYIQQRLETDA-----------SFAPSLRSSVGVMPT--------EEHTSIEFT 122
D + + +Q+LE A S ++ + PT T IE +
Sbjct: 804 DDAQRMKQAEQQLEQAALGHLPPPVAYRSALAGRTAAFAIAPTVAFDDASKANATIIEVS 863
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
G DRPGL +++ V+A L ++ +A I + +RA +VTDH
Sbjct: 864 GRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYVTDH 906
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 30/184 (16%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--YAIKDP 174
T+ + DRPGLF+++ A++ NVV A+++T + A V S G + D
Sbjct: 747 TAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGHALDVFYVQDSQGLPFGHDDA 806
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
+R+ ++ L G+ PP + R GR
Sbjct: 807 QRMKQAEQQLEQAALGH----------LPPPVAYR-----------------SALAGRTA 839
Query: 235 DKSSRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 293
+ P V + K + T+I + +DRP LL D+V + ++ + ++ A
Sbjct: 840 AFAIAPTVAFDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVD 899
Query: 294 EFYI 297
FY+
Sbjct: 900 AFYV 903
>gi|94500620|ref|ZP_01307150.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
gi|94427175|gb|EAT12155.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
Length = 896
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHG-MVNTGRTEAYQEFYIRHVDGLPISSEAE 310
T I + KD+P L + L + + ++ + A + + +G I+
Sbjct: 707 TQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNALDTYVVLDENGDSITDPLR 766
Query: 311 RERVIQCLEAA----------IERRASEGLE--------------------LELCTEDRV 340
E++ LE A I+RR S L+ LE+ DR
Sbjct: 767 LEKIQSTLEEALSNPESFPNLIQRRTSRQLKQFEFEPTAFISNDPYSKRTLLEVIAPDRP 826
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 395
GLL+ + ++F + +LS++ A+I T ++ D FY+TD G+P+ DP+ +++ +
Sbjct: 827 GLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYITDANGDPISDPEFCMELQQAV 882
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 25/184 (13%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDGKKIRDKE 85
AT I + ++ + + L+ ++L I+ A I+S +D + V+D +G I D
Sbjct: 706 ATQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNALDTYVVLDENGDSITDPL 765
Query: 86 VIDYIQQRLETDAS---------------------FAPSLRSSVGVMPTEEHTSIEFTGT 124
++ IQ LE S F P+ + + P + T +E
Sbjct: 766 RLEKIQSTLEEALSNPESFPNLIQRRTSRQLKQFEFEPT--AFISNDPYSKRTLLEVIAP 823
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL + + + D + ++ A+I T +R + ++TD + G I DP+ +++ +
Sbjct: 824 DRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYITD-ANGDPISDPEFCMELQQAV 882
Query: 185 FNVL 188
N L
Sbjct: 883 VNAL 886
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 82/217 (37%), Gaps = 34/217 (15%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D+P LF+ + A L LH N+ +A I T + A +V G +I DP R
Sbjct: 707 TQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNALDTYVVLDENGDSITDPLR 766
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR--ERRLHQIMFDDRDYERVEKAVGRVE 234
L I+ L L + F P ++ R R+L Q F+ + + R
Sbjct: 767 LEKIQSTLEEALSNPESF---------PNLIQRRTSRQLKQFEFEPTAFISNDPYSKR-- 815
Query: 235 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
T++ + + DRP LL + D + + T
Sbjct: 816 -----------------TLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDI 858
Query: 295 FYIRHVDGLPISSE----AERERVIQCLEAAIERRAS 327
FYI +G PIS ++ V+ L +E +AS
Sbjct: 859 FYITDANGDPISDPEFCMELQQAVVNALSDQLELQAS 895
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P I N+ + T+++V + ++ G+L ++ ++ D NL ++ A I ++ D+F +
Sbjct: 803 PTAFISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYIT 862
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSV 108
D +G I D E +QQ + S L++S+
Sbjct: 863 DANGDPISDPEFCMELQQAVVNALSDQLELQASL 896
>gi|294013488|ref|YP_003546948.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
gi|292676818|dbj|BAI98336.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
Length = 919
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 34/230 (14%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + D PGLF + + N+++A I T D A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
P +L+ I++ + + L NR R + ++ + R R
Sbjct: 783 HSPDQLTRIRKAIEDSL------------------ANRHRMITKL--EARPLPRTRAEAF 822
Query: 232 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R+E P V + N + +TVI + ++DRP LLF + L + V V T
Sbjct: 823 RIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGER 877
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 340
A FY+ + I S+A +Q L ERR E E+ +RV
Sbjct: 878 AVDTFYVTDLLAGKIESKAR----LQTL----ERRLLEAAGGEVAELERV 919
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI K + +++RL
Sbjct: 886 DLLAGKIESKARLQTLERRL 905
>gi|413934235|gb|AFW68786.1| hypothetical protein ZEAMMB73_680007 [Zea mays]
Length = 277
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D F +
Sbjct: 71 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMSALKNLGLNVVKASVCLDSTGKHIKFAIT 130
Query: 75 DC-DGKKIRDKEVIDYIQ---------------QRLETDASFAPSLRSSVGVMPTEE--- 115
G+KI D E+++ ++ +L A+F P PTEE
Sbjct: 131 RAFTGRKIDDPELLEAVRLTIINNMIQYHPESSSQLAMGATFGPE-------APTEEVDV 183
Query: 116 ----HTSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
H I G DRPGL ++ +++D+ NV + E T A A H
Sbjct: 184 DIATHIDIYDDGPERSLLVVETADRPGLLVDLVKIISDISINVQSGEFDTEGLLAKAKFH 243
Query: 162 VT 163
V+
Sbjct: 244 VS 245
>gi|258620994|ref|ZP_05716028.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM573]
gi|424807474|ref|ZP_18232882.1| PII uridylyl-transferase [Vibrio mimicus SX-4]
gi|258586382|gb|EEW11097.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM573]
gi|342325416|gb|EGU21196.1| PII uridylyl-transferase [Vibrio mimicus SX-4]
Length = 876
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + + +
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEEEE 857
Query: 177 LSTIKELLFNV 187
++L+ NV
Sbjct: 858 QLLREKLIENV 868
>gi|258627348|ref|ZP_05722132.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM603]
gi|258580386|gb|EEW05351.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM603]
Length = 876
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + + +
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEEEE 857
Query: 177 LSTIKELLFNV 187
++L+ NV
Sbjct: 858 QLLREKLIENV 868
>gi|262170770|ref|ZP_06038448.1| [Protein-PII] uridylyltransferase [Vibrio mimicus MB-451]
gi|261891846|gb|EEY37832.1| [Protein-PII] uridylyltransferase [Vibrio mimicus MB-451]
Length = 876
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + + +
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEEEE 857
Query: 177 LSTIKELLFNV 187
++L+ NV
Sbjct: 858 QLLREKLIENV 868
>gi|339505073|ref|YP_004692493.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
gi|338759066|gb|AEI95530.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
Length = 925
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F +D PG+F+ + LA + NVV+A +T D + + G D RL +
Sbjct: 740 FVMSDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAYWIQDADGNPY-DVSRLPRL 798
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 237
++++ L G + + S + RER I FD+ E
Sbjct: 799 RKMIERTLMG--EVVTTEAMKSRDKVKKRERAFKVPTHITFDNEGSE------------- 843
Query: 238 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
YT+I + ++DRP LL D+ TL + + + ++ T + FY+
Sbjct: 844 ------------IYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 891
Query: 298 RHVDGLPISSEAERERVIQCLEAAIER 324
+ + GL S +++ + + L AIE+
Sbjct: 892 KDMFGLKYYSASKQRTLERRLRTAIEQ 918
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R E+++ I A I+T G +V DTFYV D+ G
Sbjct: 848 IEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFG 896
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L + N+ I A I++ G +D F V
Sbjct: 832 PTHITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 891
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G K +++RL T
Sbjct: 892 KDMFGLKYYSASKQRTLERRLRT 914
>gi|398349930|ref|YP_006395394.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
gi|390125256|gb|AFL48637.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
Length = 971
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV DTFYVTD+ G +
Sbjct: 874 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKI 919
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 853 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 913 DLVGAKITNENRQANIAARLKA 934
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I + R
Sbjct: 866 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKITNENR 924
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ I L VL G D + + P GI+
Sbjct: 925 QANIAARLKAVLAGEVDEARERM---PSGII 952
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 26/216 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V+A+I T D A + + + +R
Sbjct: 755 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTADGRALDTILVNREFSVDEDETRR 814
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G P I +R R A R +
Sbjct: 815 AASIGKLIEDVLSGRKRL--------PEVIASRTR-----------------ARKRSKAF 849
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 850 TVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 909
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
Y+ + G I++E + + L+A + E E
Sbjct: 910 YVTDLVGAKITNENRQANIAARLKAVLAGEVDEARE 945
>gi|354598884|ref|ZP_09016901.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
gi|353676819|gb|EHD22852.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
Length = 894
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 32/186 (17%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E SS+P V + + + T I +R +DRP L + L V + T R
Sbjct: 689 LEHDSSKPLVLISHQASRGGTEIFIRCQDRPYLFATVAGELDRRNLSVHDAQIFTSRDGM 748
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAI---------ERRASEGLE---------- 331
A F + DG P++ + E LE A+ RR+S L
Sbjct: 749 AMDTFIVLEPDGSPLAQD-RHETTRYALEQALTQRDYQHPRARRSSPKLRHFSVPTEVSF 807
Query: 332 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 808 LPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSERR 867
Query: 382 PVDPKI 387
+ P++
Sbjct: 868 ALKPEL 873
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + ++ + V L+ NL + A I +S G MD F V
Sbjct: 696 PLVLISHQASRGGTEIFIRCQDRPYLFATVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 755
Query: 74 IDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + E Y ++ T + +P LR + V +PT +
Sbjct: 756 LEPDGSPLAQDRHETTRYALEQALTQRDYQHPRARRSSPKLRHFSVPTEVSFLPTHTDRR 815
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ +E + D+PGL + + + ADL+ ++ A I T +R + + D
Sbjct: 816 SYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD 863
>gi|358448298|ref|ZP_09158802.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
gi|357227395|gb|EHJ05856.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
Length = 881
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ T DR GLL+ I ++ E+ + + A+I+T+G +V+D F+VTD G P+ +P + +
Sbjct: 809 MEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFVTDEHGEPIREPAVCQA 868
Query: 391 IRRQI 395
+++ +
Sbjct: 869 LQQDL 873
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V N+T TV++V + ++ G+L ++ QVL + + + A I++ G DVF V
Sbjct: 793 PTEVTFSNDTINQRTVMEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFV 852
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+ IR+ V +QQ L
Sbjct: 853 TDEHGEPIREPAVCQALQQDL 873
>gi|389693889|ref|ZP_10181983.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
gi|388587275|gb|EIM27568.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
Length = 916
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN+ + TVI++ +++ G+L + L +NL I A+I + G +DVF V
Sbjct: 819 PPEVNIDNSLSSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYV 878
Query: 74 IDCDGKKI 81
D G KI
Sbjct: 879 TDLTGTKI 886
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T IE +G DRPGL ++ L L+ N+ +A I T ++A V +VTD TG I
Sbjct: 829 SSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTD-LTGTKIT 887
Query: 173 DPKRLSTIKELLFNVLRG 190
R +TI L V +
Sbjct: 888 HAGRQATITRTLLEVFKA 905
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL D+T + +L+I A I T G K D FYVTD+TG +
Sbjct: 835 IEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTDLTGTKI 886
>gi|302542214|ref|ZP_07294556.1| protein-P-II uridylyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302459832|gb|EFL22925.1| protein-P-II uridylyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 448
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ +D GLL I R L+++ A +ST+G D FYVTD TG P+ P +
Sbjct: 380 IEVRAQDIPGLLHRIGRALEAAGLTVRSAHVSTLGANAVDAFYVTDPTGAPLAPMRAAEV 439
Query: 392 RRQI 395
R++
Sbjct: 440 AREV 443
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
Y K RR PPRV I + ATVI+V + + G+L ++ + L L ++ A++
Sbjct: 351 YRKYPRRRGVHAPPPRVTIAPGSSQLATVIEVRAQDIPGLLHRIGRALEAAGLTVRSAHV 410
Query: 61 SSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL 94
S+ G +D F V D G + R EV ++Q L
Sbjct: 411 STLGANAVDAFYVTDPTGAPLAPMRAAEVAREVEQAL 447
>gi|254429939|ref|ZP_05043646.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
gi|196196108|gb|EDX91067.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
Length = 890
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ T DR GLL+ I RIF + ++ A I+T+G + +D F++TD+ G PV DP +
Sbjct: 814 VDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQE 873
Query: 391 IRRQI 395
+++ +
Sbjct: 874 LQQTL 878
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 47/84 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +VVI N+ D T + + ++++ G+L + ++ ++++ A I++ G DVF +
Sbjct: 798 PTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFI 857
Query: 74 IDCDGKKIRDKEVIDYIQQRLETD 97
D DG+ + D + +QQ L+ +
Sbjct: 858 TDLDGEPVSDPTLCQELQQTLKQE 881
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 8 LIRRMNP--PRVVI---DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YIS 61
L+ R +P P V+I + A + I + + + + + L+ + L I A I+
Sbjct: 677 LLDREDPDDPLVLIRESSQSVLAGGSQIFIYTPDTRNLFSATVNALDSLGLTIMDARIIT 736
Query: 62 SDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDASFAPSLRSSVGV---------- 110
S G+ +D + V+D G I D I+ I++ L + ++V
Sbjct: 737 SVDGFSLDTYIVLDEHGTPIGEDWARIEQIRKTLTETLKYPDRYATTVSRRMPRRNKHFD 796
Query: 111 MPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+PT+ + T+++ DRPGL + + + V NA I T +RA V
Sbjct: 797 VPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFF 856
Query: 162 VTDHSTGYAIKDPKRLSTIKELL 184
+TD G + DP +++ L
Sbjct: 857 ITDLD-GEPVSDPTLCQELQQTL 878
>gi|110834002|ref|YP_692861.1| PII uridylyl-transferase [Alcanivorax borkumensis SK2]
gi|110647113|emb|CAL16589.1| protein-pII uridylyltransferase [Alcanivorax borkumensis SK2]
Length = 890
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ T DR GLL+ I RIF + ++ A I+T+G + +D F++TD+ G PV DP +
Sbjct: 814 VDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQE 873
Query: 391 IRRQI 395
+++ +
Sbjct: 874 LQQTL 878
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 3 DEYAKLI-RRMN--------PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D YA + RRM P +VVI N+ D T + + ++++ G+L + ++ +
Sbjct: 778 DRYASTVSRRMPRRNKHFDVPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEI 837
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDA 98
+++ A I++ G DVF + D DG+ + D + +QQ L E DA
Sbjct: 838 LVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQELQQTLKQELDA 884
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 8 LIRRMNP--PRVVI---DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YIS 61
L+ R +P P V+I + A + I + + + + + ++ + L I A I+
Sbjct: 677 LLDREDPEDPLVLIRESSQSVLAGGSQIFIYTPDTRNLFSATVNAIDSLGLTIMDARIIT 736
Query: 62 SDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDASFAPSLRSSVGV---------- 110
S G+ +D + V+D G I D I+ I++ L + S+V
Sbjct: 737 SVDGFSLDTYIVLDEQGTPIGEDWARIEQIRKTLTETLKYPDRYASTVSRRMPRRNKHFD 796
Query: 111 MPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+PT+ + T+++ DRPGL + + + V NA I T +RA V
Sbjct: 797 VPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFF 856
Query: 162 VTDHSTGYAIKDPKRLSTIKELL 184
+TD G + DP +++ L
Sbjct: 857 ITDLD-GEPVSDPTLCQELQQTL 878
>gi|378824627|ref|YP_005187359.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
gi|365177679|emb|CCE94534.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
Length = 971
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV DTFYVTD+ G +
Sbjct: 874 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKI 919
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 853 PEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 913 DLVGAKITNENRQINIAARLKA 934
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I + R
Sbjct: 866 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKITNENR 924
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
I L VL G D + + P GI+
Sbjct: 925 QINIAARLKAVLAGEVDEARERM---PSGII 952
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 26/216 (12%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L + + A N+V+A+I T +D A + + + +R
Sbjct: 755 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTSDGRALDTILVNREFSVDEDEMRR 814
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
++I +L+ +VL G P I +R R A R +
Sbjct: 815 AASIGKLIEDVLSGRKRL--------PEVIASRTR-----------------AKKRSKAF 849
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 295
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 850 TVTPEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 909
Query: 296 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
Y+ + G I++E + + L+A + E E
Sbjct: 910 YVTDLVGAKITNENRQINIAARLKAVLAGEVDEARE 945
>gi|404493132|ref|YP_006717238.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
gi|77545196|gb|ABA88758.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
Length = 906
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P +T + D PGLF+ + V+A N+ A+I+T D A + +GYA
Sbjct: 713 PDGFYTQLTIVTHDMPGLFTMITGVMAAYGINIFGAQIFTQRDGTAFDILQVKGPSGYAD 772
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
++ T++E L V+ G L ++ + +R + + D + +V
Sbjct: 773 ATSEKWRTVEESLLAVIEG---------RLKVEDLIRKRQR--PVFWADAGHPKVP---- 817
Query: 232 RVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
+V + N + +DYTV+ + + D +L+ I TL D+ + ++T +
Sbjct: 818 --------SRVDIDNEVSQDYTVLDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQ 869
Query: 291 AYQEFYIRHVDGLPISS----EAERERVIQCLE 319
FY++ + I+ E R +++ CL+
Sbjct: 870 VADTFYVKDIFSQKITDPDRMEEVRSQLLNCLD 902
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
L++ T D VG+L I R R+ L + A+IST +V DTFYV D+ + DP ++
Sbjct: 833 LDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQVADTFYVKDIFSQKITDPDRMEE 892
Query: 391 IRRQI 395
+R Q+
Sbjct: 893 VRSQL 897
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN D TV+ V + ++ G+L ++ + L D+ L + A IS+ D F V
Sbjct: 817 PSRVDIDNEVSQDYTVLDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQVADTFYV 876
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D +KI D + ++ ++ +L
Sbjct: 877 KDIFSQKITDPDRMEEVRSQL 897
>gi|303290516|ref|XP_003064545.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454143|gb|EEH51450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 271
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+I+N ATV+ V + G LL L + L I +A +S ++ F +
Sbjct: 53 PAVIINNTEDPLATVVTVAFGDVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYIT 112
Query: 75 DC-DGKKIRDKEVIDYIQ---------------------QRLET-----------DASFA 101
D +KI + ++ I+ Q +E A A
Sbjct: 113 DARTSEKITKSKTLELIRMTIINNMLQYHPEAADYLVEGQHIEMPGDRDADANPLGARVA 172
Query: 102 PSLRSSVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
P++++SV V T + + T TDRPGL ++ A L DL NV++AEI T +A +
Sbjct: 173 PAVKTSVVVDNTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDI 232
Query: 160 VHVT 163
V+VT
Sbjct: 233 VYVT 236
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 71/183 (38%), Gaps = 27/183 (14%)
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
G + A L L N+V AE+ + ++TD T I K L I+ + N
Sbjct: 77 GQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYITDARTSEKITKSKTLELIRMTIINN 136
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE------RVEKAV--GRVEDKSSR 239
+ Y P H M DRD + RV AV V D +S
Sbjct: 137 MLQYH----------PEAADYLVEGQHIEMPGDRDADANPLGARVAPAVKTSVVVDNTSG 186
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
+ + L +IT + DRP LL DIV TL D+ V ++T +AY Y+ +
Sbjct: 187 ARQSKL-------IIT--TTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDIVYVTY 237
Query: 300 VDG 302
G
Sbjct: 238 QGG 240
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 376
+L + T DR GLL DI ++ SL++ AEI TIG K D YVT
Sbjct: 191 KLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDIVYVT 236
>gi|78357352|ref|YP_388801.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
gi|78219757|gb|ABB39106.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
Length = 872
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D+PGLFS + VLA +V +A+ + G + D R+S
Sbjct: 693 FAAKDQPGLFSVLTGVLALHGLDVFSADAFVWG--------------GGVVLDVFRVSPP 738
Query: 181 KELLFNVLRGYDDFRKAKTSL--SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
+ L+ D + K + S+ + G ++ + RL ++ R V+KA G
Sbjct: 739 PDPLY----ARDFWAKVRGSVHFALTGKLSLDFRLEEMR--SRSLSPVQKAGG------G 786
Query: 239 RPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
R +VT+ N D Y+VI + + DRP LL+DI T+ M+ + + T + F +
Sbjct: 787 RTEVTIDNAISDFYSVIDITAPDRPVLLYDIARTMQAMRLDIQFARIATHGMQTSDSFSV 846
Query: 298 RHVDGLPISSEAERERVIQCLEAAI 322
R V G + E + E V Q L A+
Sbjct: 847 RDVFGNKLLEEQQCEEVRQALLHAV 871
>gi|222147341|ref|YP_002548298.1| PII uridylyl-transferase [Agrobacterium vitis S4]
gi|254798828|sp|B9JZI2.1|GLND_AGRVS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|221734331|gb|ACM35294.1| protein-P-II uridylyltransferase [Agrobacterium vitis S4]
Length = 941
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N+ TVI+++ +++ G+L +V VL D++L I A I++ G +D F VI
Sbjct: 826 PHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVI 885
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAP 102
D G+KI ++ I RL+ S P
Sbjct: 886 DLVGQKITNENRQGSISVRLKAVMSEQP 913
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR+GLL+++T + + SL I A I+T G KV DTFYV D+ G +
Sbjct: 841 IEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVIDLVGQKI 892
>gi|163849787|ref|YP_001637830.1| PII uridylyl-transferase [Methylobacterium extorquens PA1]
gi|240136999|ref|YP_002961468.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens AM1]
gi|418060313|ref|ZP_12698231.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
gi|163661392|gb|ABY28759.1| protein-P-II uridylyltransferase [Methylobacterium extorquens PA1]
gi|240006965|gb|ACS38191.1| [Protein-PII] uridylyltransferase (PII uridylyl- transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens AM1]
gi|373566138|gb|EHP92149.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
Length = 928
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVV 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 880 TDLTGTRVVQPDRLAMIRAAVMEVFASDVAALRA 913
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDS 390
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V P +
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVVQPDRLAM 895
Query: 391 IRRQI 395
IR +
Sbjct: 896 IRAAV 900
>gi|414164976|ref|ZP_11421223.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
gi|410882756|gb|EKS30596.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
Length = 943
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
KIR E + Q D F + ++ +T IE TG DRPGL ++ ++
Sbjct: 826 KIRLPETVAKRTQTRTKDKVFVVEPEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISK 885
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKA 197
L N+ +A + T +R V +VTD G I P R + IK L ++L D R A
Sbjct: 886 LSLNIGSAHVATFGERVRDVFYVTD-LMGAQITAPTRQAAIKRALVHLLANPDVARGA 942
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + SL+I A ++T G +V+D FYVTD+ G + P +
Sbjct: 865 IEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAA 924
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 925 IKRALVH 931
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVI+N TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V
Sbjct: 850 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 909
Query: 75 DCDGKKI 81
D G +I
Sbjct: 910 DLMGAQI 916
>gi|261253730|ref|ZP_05946303.1| [Protein-PII] uridylyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954531|ref|ZP_12597565.1| PII uridylyl-transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260937121|gb|EEX93110.1| [Protein-PII] uridylyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815251|gb|EGU50175.1| PII uridylyl-transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 873
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYCKDQHALFASVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPS---------------LRSSVGVMPTE- 114
+D +G I R K V ++ L A P+ ++++V +PT+
Sbjct: 739 LDQNGDAIDESRHKAVTKHLAHVL---ADGRPTKIKRRRTPRNLQHFKVKTTVDFLPTKS 795
Query: 115 -EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +EF D PGL + V A AD ++ A+I T +RA + +T S G
Sbjct: 796 KKRTLLEFVALDTPGLLATVGATFADQGVHLHAAKITTIGERAEDLFIITSPSGG 850
>gi|254558851|ref|YP_003065946.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens DM4]
gi|254266129|emb|CAX21881.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens DM4]
Length = 928
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVV 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 880 TDLTGTRVVQPDRLAMIRAAVMEVFASDVAALRA 913
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDS 390
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V P +
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVVQPDRLAM 895
Query: 391 IRRQI 395
IR +
Sbjct: 896 IRAAV 900
>gi|218528430|ref|YP_002419246.1| PII uridylyl-transferase [Methylobacterium extorquens CM4]
gi|218520733|gb|ACK81318.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens
CM4]
Length = 928
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVV 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKI 81
D G ++
Sbjct: 880 TDLTGTRV 887
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGTRV 887
>gi|407802895|ref|ZP_11149734.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
gi|407023055|gb|EKE34803.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
Length = 902
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 51/84 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +V+I N+ D TV+ V ++++ G+L ++ ++ + +L+++ A I++ G DVF +
Sbjct: 802 PTQVIISNDIVNDRTVVDVQTLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFI 861
Query: 74 IDCDGKKIRDKEVIDYIQQRLETD 97
DG + D ++ +QQRL+ +
Sbjct: 862 TQKDGGPVTDPDLCQRLQQRLKEE 885
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 394
T DR GLL+ I R+F E L ++ A I+T+G +V+D F++T G PV DP + ++++
Sbjct: 822 TLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFITQKDGGPVTDPDLCQRLQQR 881
Query: 395 I 395
+
Sbjct: 882 L 882
>gi|384248969|gb|EIE22452.1| glycoside hydrolase [Coccomyxa subellipsoidea C-169]
Length = 938
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCD 77
DNNT DATV+ + ++H +LL++ LN + L + A I SSD G +DVF V + +
Sbjct: 99 FDNNTDPDATVVTITGPDQHNLLLRLTAALNSMGLNVVSASISSSDDGTVLDVFRVTNSE 158
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTGTDRPG 128
+K+ + + LE A A S RSS G P E G+ R G
Sbjct: 159 DQKVPEDSWDGVRESVLEMLA--ASSSRSSKPAIFGAAPAPEEQQRRPLGSAREG 211
>gi|222084682|ref|YP_002543211.1| PII uridylyl-transferase [Agrobacterium radiobacter K84]
gi|398379620|ref|ZP_10537740.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
gi|221722130|gb|ACM25286.1| protein-P-II uridylyltransferase [Agrobacterium radiobacter K84]
gi|397722252|gb|EJK82796.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
Length = 971
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I A I++ G +D F V
Sbjct: 848 PPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
D G+KI ++ I RL+
Sbjct: 908 TDLVGQKISNENKRANITARLK 929
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS+IT + + SL I A I+T G KV D+FYVTD+ G +
Sbjct: 870 DRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTDLVGQKI 915
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIFTTADGRALDTIHVSREFTDDA-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL +++ R KA
Sbjct: 810 RAGTIGRMIEDVLAG-------------------RKRLPEVIATRTKNRRKNKAF----- 845
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P VT+ N + +TVI + DR LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDS 904
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAI 322
FY+ + G IS+E +R + L+ +
Sbjct: 905 FYVTDLVGQKISNENKRANITARLKPVM 932
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DR GL SE+ +VL+DL ++ +A I T ++ +VTD G I + +
Sbjct: 862 TVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTD-LVGQKISNENK 920
Query: 177 LSTIKELLFNVLRGYDD 193
+ I L V+ G +D
Sbjct: 921 RANITARLKPVMAGEED 937
>gi|405377530|ref|ZP_11031471.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
gi|397325967|gb|EJJ30291.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
Length = 963
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLLS++T + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 864 IEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 32/216 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 175
T I D P L + + A N+V+A+I+T +D RA +HV+ + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFPNDE-DELR 809
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
R TI ++ +VL G +RL ++ +A R +
Sbjct: 810 RAGTIGRMIEDVLSG-------------------RKRLPDVI--------ATRAKNRKKS 842
Query: 236 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 292
K+ P V + N + +TVI + DRP LL ++ L+D+ + + T +
Sbjct: 843 KAFIIPPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVI 902
Query: 293 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEQDE 938
>gi|95929135|ref|ZP_01311879.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
gi|95134633|gb|EAT16288.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
Length = 892
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV IDN + TV+ V ++++ G+L Q+ L + + I + IS+ G D F V
Sbjct: 806 PPRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTKGDRAGDTFYV 865
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI E +D +++ L D S
Sbjct: 866 QDIFGHKIVQPEKLDELRETLIKDLS 891
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDS 390
+++ T DRVGLL I ++ + I ++IST G + DTFYV D+ G+ V P+ +D
Sbjct: 822 VDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTKGDRAGDTFYVQDIFGHKIVQPEKLDE 881
Query: 391 IR 392
+R
Sbjct: 882 LR 883
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 36 NKHGILLQVIQVLNDVNLV---IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
K GI + ++QV D N+ K A I D WF+ +D +K R ++D +Q
Sbjct: 743 QKSGIAVDILQVGRDGNIYDDDRKWATIEKDLIWFLQGRGDVDEQVEK-RKSSILDLSRQ 801
Query: 93 RLETDASFAPSL--RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150
P++ R + ++E+T ++ T DR GL ++ L + + ++I
Sbjct: 802 --------VPTIPPRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKIS 853
Query: 151 THNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
T DRA +V D G+ I P++L ++E L L
Sbjct: 854 TKGDRAGDTFYVQD-IFGHKIVQPEKLDELRETLIKDL 890
>gi|372276073|ref|ZP_09512109.1| PII uridylyl-transferase [Pantoea sp. SL1_M5]
Length = 884
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSEWAPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 390 SIRRQI 395
++R+++
Sbjct: 869 ALRQRL 874
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + +AP S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSEWAPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|390436901|ref|ZP_10225439.1| PII uridylyl-transferase [Pantoea agglomerans IG1]
Length = 884
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSEWAPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 390 SIRRQI 395
++R+++
Sbjct: 869 ALRQRL 874
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + +AP S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSEWAPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|393721067|ref|ZP_10340994.1| PII uridylyl-transferase [Sphingomonas echinoides ATCC 14820]
Length = 926
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 34/182 (18%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPIS 306
E+ T++T+ + D P L + I ++ + ++T R A F ++ G P
Sbjct: 732 ERGATLVTVYAADHPGLFYRIAGAISVGGGNIIDARIHTTRDGMALDNFLVQDPFGRPFD 791
Query: 307 SEAERERVIQCLEAAIERRA---------------SEGLEL-----------------EL 334
A+ R+ Q +E A+ R +E + E+
Sbjct: 792 ESAQLSRLKQAIEDALANRGKMIDRLMAKPLTRPRAEAFAIAPNVLIDNKASNRFTVIEI 851
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRR 393
DR LL + ++ ++I A ++T G + DTFY+TD+TG+ + P + +I R
Sbjct: 852 NARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLTDLTGDKIAAPSRLKTIER 911
Query: 394 QI 395
++
Sbjct: 912 RL 913
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI++++ ++ +L Q+ L + I A++++ G +D F +
Sbjct: 834 PNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I++RL
Sbjct: 894 DLTGDKIAAPSRLKTIERRL 913
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 26/199 (13%)
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
V P T + D PGLF + ++ N+++A I T D A + G
Sbjct: 729 VYPERGATLVTVYAADHPGLFYRIAGAISVGGGNIIDARIHTTRDGMALDNFLVQDPFGR 788
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
+ +LS +K+ + + L NR + + ++M R E
Sbjct: 789 PFDESAQLSRLKQAIEDAL------------------ANRGKMIDRLMAKPLTRPRAEAF 830
Query: 230 VGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
+ P V + N + +TVI + ++DRP LL + L + + V T
Sbjct: 831 -------AIAPNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYG 883
Query: 289 TEAYQEFYIRHVDGLPISS 307
A FY+ + G I++
Sbjct: 884 ERAVDTFYLTDLTGDKIAA 902
>gi|407791701|ref|ZP_11138781.1| PII uridylyl-transferase [Gallaecimonas xiamenensis 3-C-1]
gi|407199178|gb|EKE69199.1| PII uridylyl-transferase [Gallaecimonas xiamenensis 3-C-1]
Length = 856
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 36/169 (21%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V + +T T + V + ++ + + VL+ NL I A + +S GW +D V
Sbjct: 665 PLVKLSKHTTRGGTELFVYTRDRAQLFACIASVLDGKNLSINDAQVMTSKDGWALDSLVV 724
Query: 74 IDCDGKKIRDKEVIDYIQQRLE--------------------------TDASFAPSLRSS 107
++ DG + + ++ +E TD +F PS R
Sbjct: 725 VERDGSPVESPSRVQSTRRAIEKALLQAKFPKPVQRPLPRQLKPFQVSTDVTFLPSSR-- 782
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ T +EFT DRPGL ++V V A+ ++ A+I T +RA
Sbjct: 783 -------KQTLVEFTALDRPGLLAQVGQVFAEQDISLKAAKITTIGERA 824
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E DR GLL+ + ++F E +S+K A+I+TIG + +D F +T + G +
Sbjct: 787 VEFTALDRPGLLAQVGQVFAEQDISLKAAKITTIGERAEDFFILTTMAGEAL 838
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 329 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG-GKVKDTFYVTDVTGNPVD-PK 386
G EL + T DR L + I + +LSI A++ T G D+ V + G+PV+ P
Sbjct: 677 GTELFVYTRDRAQLFACIASVLDGKNLSINDAQVMTSKDGWALDSLVVVERDGSPVESPS 736
Query: 387 IIDSIRRQIGHTKLQVKRSTILAPKP 412
+ S RR I LQ K PKP
Sbjct: 737 RVQSTRRAIEKALLQAK-----FPKP 757
>gi|197106924|ref|YP_002132301.1| PII uridylyl-transferase [Phenylobacterium zucineum HLK1]
gi|238690153|sp|B4RC79.1|GLND_PHEZH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|196480344|gb|ACG79872.1| protein-P-II uridylyltransferase [Phenylobacterium zucineum HLK1]
Length = 938
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++DN +TV++ ++ G+L + + ++D L I A+I G +D F V+
Sbjct: 831 PAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGYGERAVDAFYVV 890
Query: 75 DCDGKKIRD 83
D DG+K+ D
Sbjct: 891 DADGRKLTD 899
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 22/144 (15%)
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKI--RDKEVIDYIQQRLETDASFAPSLR------ 105
V+ +S G +DVF V D G+ D + + + L A P R
Sbjct: 760 VMGARVFTSRAGQALDVFYVQDASGQPFGSHDPRALARLAETLACAARGEPVAREPRKPQ 819
Query: 106 -----SSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152
++ + P +E T +E +G DRPGL + + ++D ++++A I +
Sbjct: 820 DLGRTAAFAITPAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGY 879
Query: 153 NDRAAAVVHVTDHSTGYAIKDPKR 176
+RA +V D + G + D ++
Sbjct: 880 GERAVDAFYVVD-ADGRKLTDARK 902
>gi|168006925|ref|XP_001756159.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692669|gb|EDQ79025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 422
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 158/395 (40%), Gaps = 55/395 (13%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY + R NP D + I ++ +K G+ + +++ + L + K +S+
Sbjct: 6 DEYVVVRRGRNP----------GDPSEITINCPDKVGLGCDLARIVFEFGLSVTKGDMST 55
Query: 63 DGGW-FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSV--GVMPTEEHTS- 118
DG W F+ ++ +R ++QRLE PS +S+ V P
Sbjct: 56 DGRWCFVALWVTPRSRPSTVR----WSLLKQRLE---DVCPSALASILTPVSPPVPEAKR 108
Query: 119 ---IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDP 174
++ +DR GL +V L ++ + ++ T D RA + VTD+ K
Sbjct: 109 VLLLQVCSSDRTGLLHDVAQKLWEMELTIHKIKVSTSPDGRAVDLFFVTDNRNKQPWKKR 168
Query: 175 KRLST--IKELLFN-------VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
T +KE L L G + T P + ++ ++ +
Sbjct: 169 AEEVTNQLKEFLGEPCSLCEISLAGSEC--GGLTCFPLPATITKDIFYEDPATFEKGNTK 226
Query: 226 VEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH--- 281
EK R E ++ VTV N ++++ + K R LL+D + T+ D V H
Sbjct: 227 SEKINSRSEHHANEVVVTVENSTSPVHSLVQLTCKSRKSLLYDCLRTVKDFSLKVAHGRI 286
Query: 282 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE-----RRASEGLELEL-- 334
GM+ G +E ++ G I++ +++ + QC+E + + + G + EL
Sbjct: 287 GMLENGNSEI--SLFVLGPSGQRITNVQDQKSLAQCVEEEVGHPVRIKVGTRGPDTELLV 344
Query: 335 ------CTEDRVGLLSDITRIFRENSLSIKRAEIS 363
C R +L D+T + + I +A+I
Sbjct: 345 ATPIEKCGRGRPRVLYDVTLALKMLDICIFKADIG 379
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD 377
A L L++C+ DR GLL D+ + E L+I + ++ST G+ D F+VTD
Sbjct: 106 AKRVLLLQVCSSDRTGLLHDVAQKLWEMELTIHKIKVSTSPDGRAVDLFFVTD 158
>gi|403057411|ref|YP_006645628.1| protein-P-II uridylyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804737|gb|AFR02375.1| protein-P-II uridylyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 930
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 729 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 788
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + E+I + ++ T S+ +P LR + V +PT
Sbjct: 789 FIVLEPDGSPLAQDRHEMIRHALEQALTHRSYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 848
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 849 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 907
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 908 DLRLKLQERL 917
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 31/166 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 310
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 745 TEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLAQD-R 803
Query: 311 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 341
E + LE A+ RR S L +EL D+ G
Sbjct: 804 HEMIRHALEQALTHRSYQHPRVRRPSPKLRHFSVPTEVNFLPTHTDRRSYMELSALDQPG 863
Query: 342 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
LL+ I IF + +LS+ A ISTIG +V+D F + D + P +
Sbjct: 864 LLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRRALKPDL 909
>gi|406895502|gb|EKD40049.1| hypothetical protein ACD_75C00195G0001, partial [uncultured
bacterium]
Length = 651
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
+VVIDN + +VI+V + + G L + Q + D L I KAYI+++ +DVF V
Sbjct: 562 ASKVVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYV 621
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+D G+K+ D++ + Q L
Sbjct: 622 LDSRGRKLVDEDFRHEVTQGL 642
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
RS V TE+ + DRPGL +++C V+A + VV A+I+T D VV V D
Sbjct: 451 RSLVLASETEDAWQLLIMTVDRPGLLAKICGVMALNNLTVVKAQIFTWAD--GTVVDVID 508
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
++ LS + +G+ + + L+ M RL++ + Y
Sbjct: 509 ------VRSMDGLSFAE-------KGWRSLNE-QLDLAIEHRMGLSHRLYRKL--SSGYG 552
Query: 225 RVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
R + VG V K V + N + Y+VI + + D P L+ I + D +
Sbjct: 553 RRSQMVGEVASK-----VVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAY 607
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+ T + FY+ G + E R V Q L +I R +
Sbjct: 608 IATEVEQLIDVFYVLDSRGRKLVDEDFRHEVTQGLLHSIGRES 650
>gi|145631865|ref|ZP_01787623.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
gi|144982521|gb|EDJ90079.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
Length = 863
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 322 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 382 PVDPKIIDSIR----RQIG 396
+D + + +R R IG
Sbjct: 845 ALDSQQREILRNVLYRNIG 863
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ ++P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSIVPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|325109443|ref|YP_004270511.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
gi|324969711|gb|ADY60489.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
Length = 888
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
VVIDN+T + AT++ V + ++ G+L + + + D++L + A I++ +DVF V D
Sbjct: 794 VVIDNDTSSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDL 853
Query: 77 DGKKIRD----KEVIDYIQQRLE 95
DG KI D K + D +Q+ L+
Sbjct: 854 DGNKILDEYSRKAIRDRVQRVLD 876
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
+S+ +++ DR GLL I++ + LS+ A I+T +V D FYVTD+ GN
Sbjct: 801 SSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDLDGN---- 856
Query: 386 KIIDSIRRQIGHTKLQ 401
KI+D R+ ++Q
Sbjct: 857 KILDEYSRKAIRDRVQ 872
>gi|334703601|ref|ZP_08519467.1| protein-P-II uridylyltransferase [Aeromonas caviae Ae398]
Length = 880
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
LEL D GLL+ I +F++ LS+ A+I+TIG +V+D F +T + G P++P+
Sbjct: 803 LELTALDTPGLLARIGAVFQQCGLSLHAAKITTIGERVEDFFSLTTLAGEPLNPE 857
>gi|260582819|ref|ZP_05850605.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
gi|260094145|gb|EEW78047.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
Length = 863
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 322 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 382 PVDPKIIDSIR----RQIG 396
+D + + +R R IG
Sbjct: 845 ALDSQQREILRNVLYRNIG 863
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|323137182|ref|ZP_08072261.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
gi|322397540|gb|EFY00063.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
Length = 938
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+T IE +G DR GL ++ ++ L+ N+ +A I T +RA +VTD TG I P+
Sbjct: 850 YTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVTD-LTGAKIIAPQ 908
Query: 176 RLSTIKELLFNVLRGYDDFRKAK 198
R +TIK L V + + R A+
Sbjct: 909 RQATIKRQLLEVFQPSAEKRPAR 931
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VV+DN+ TVI+V +++ G+L + ++ +NL I A+I + G +D F V
Sbjct: 838 PEVVVDNSLSNVYTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVT 897
Query: 75 DCDGKKI 81
D G KI
Sbjct: 898 DLTGAKI 904
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDS 390
+E+ DR GLL D+T + +L+I A I T G + D FYVTD+TG + P+ +
Sbjct: 853 IEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVTDLTGAKIIAPQRQAT 912
Query: 391 IRRQI 395
I+RQ+
Sbjct: 913 IKRQL 917
>gi|333983340|ref|YP_004512550.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
gi|333807381|gb|AEG00051.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
Length = 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 327 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
S+ +EL T DR GLLS I + F + + + A+I+TIG + +D FYVTD P+
Sbjct: 804 SKHTTIELITTDRAGLLSTIGKAFTKLDIHLHDAKITTIGSRAEDMFYVTDQNCQPI 860
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P V++ T + I V + N+ I L+ + L I A I+++ + ++ F V
Sbjct: 685 PLVLLRPQTQRGSAEIFVYTRNEAQIFSICTATLDHLGLTILDARIITTEDQYVLNSFQV 744
Query: 74 IDCDGKKI----RDKEVIDYIQQRL--------------ETDASFAPSLRSSVGVM--PT 113
++ G+ I R+ + D ++Q L A P + +SV + P
Sbjct: 745 LEQSGEAINDLYREIHICDTLRQGLINKKANSSKNIHKQSRQARHFP-IETSVTFLDNPL 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+HT+IE TDR GL S + L ++ +A+I T RA + +VTD +
Sbjct: 804 SKHTTIELITTDRAGLLSTIGKAFTKLDIHLHDAKITTIGSRAEDMFYVTDQN 856
>gi|307943361|ref|ZP_07658705.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
gi|307772991|gb|EFO32208.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
Length = 945
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V+++N+ D TV+++ +++ G+L + + ++ +NL I A+I++ G +DVF V D
Sbjct: 846 VLVNNSISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDL 905
Query: 77 DGKKIRDKEVIDYIQQRLET 96
G+KI + + I++RLE
Sbjct: 906 TGQKIANIGRQEIIRERLEA 925
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DR GLL D+TR +L+I A I+T G KV D FYVTD+TG KI +
Sbjct: 859 VEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDLTGQ----KIANIG 914
Query: 392 RRQIGHTKLQV 402
R++I +L+
Sbjct: 915 RQEIIRERLEA 925
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++++T +E TG DRPGL ++ ++ L+ N+ +A I T ++ V +VTD TG I
Sbjct: 853 SDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTD-LTGQKIA 911
Query: 173 DPKRLSTIKELLFNVLRGYDDF 194
+ R I+E L + G D
Sbjct: 912 NIGRQEIIRERLEAAVGGNVDM 933
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 246 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 305
+I DYTV+ + DRP LLFD+ ++ + + + T + FY+ + G I
Sbjct: 851 SISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDLTGQKI 910
Query: 306 SSEAERERVIQCLEAAI 322
++ +E + + LEAA+
Sbjct: 911 ANIGRQEIIRERLEAAV 927
>gi|170749943|ref|YP_001756203.1| PII uridylyl-transferase [Methylobacterium radiotolerans JCM 2831]
gi|170656465|gb|ACB25520.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium radiotolerans
JCM 2831]
Length = 935
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E TG DRPGL E+ + L N+ +A + T +RA V +VTD TG + P R
Sbjct: 841 TVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVTQPDR 899
Query: 177 LSTIKELLFNVL 188
+ I+ + +V
Sbjct: 900 QAAIRAAVMDVF 911
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN---------P 382
+E+ DR GLL ++T F SL+I A ++T G + D FYVTD+TG
Sbjct: 843 VEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVTDLTGTRVTQPDRQAA 902
Query: 383 VDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 416
+ ++D + K + + + AP PP+E
Sbjct: 903 IRAAVMDVFAHDVATLKAEGLEALVAAP-PPREA 935
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+IDN + TV+++ +++ G+L ++ + ++L I A++++ G +DVF V
Sbjct: 827 PPDVIIDNALSSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYV 886
Query: 74 IDCDGKKI 81
D G ++
Sbjct: 887 TDLTGTRV 894
>gi|86139310|ref|ZP_01057880.1| PII uridylyl-transferase [Roseobacter sp. MED193]
gi|85824154|gb|EAQ44359.1| PII uridylyl-transferase [Roseobacter sp. MED193]
Length = 937
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 45/214 (21%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
F D PG+F+ V LA + NVV+A +T D + G+ + RL +
Sbjct: 752 FVMADHPGIFARVSGALALVGANVVDARSYTTKDGYVTDAFWIQDADGHPF-EASRLPRL 810
Query: 181 KELLFNVLRG----------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
+++ L G D F+K + + P I FD+ E
Sbjct: 811 NQMILKTLNGEVITGEALETRDKFKKREKAFKVPT---------HITFDNEGSE------ 855
Query: 231 GRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
YT+I + ++DR LL+D+ TL + + ++ T +
Sbjct: 856 -------------------IYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQ 896
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
FY++ + GL S+++++ + + L AI +
Sbjct: 897 VVDTFYVKDMFGLKYHSKSKQDFLERKLREAISK 930
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 844 PTHITFDNEGSEIYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQVVDTFYV 903
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K K D+++++L
Sbjct: 904 KDMFGLKYHSKSKQDFLERKL 924
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ R ++ I A I+T G +V DTFYV D+ G
Sbjct: 860 IEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQVVDTFYVKDMFG 908
>gi|378697957|ref|YP_005179915.1| uridylyltransferase [Haemophilus influenzae 10810]
gi|301170473|emb|CBW30080.1| uridylyltransferase [Haemophilus influenzae 10810]
Length = 863
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 322 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNRFGQ 844
Query: 382 PVDPKIIDSIR----RQIG 396
+D + + +R R IG
Sbjct: 845 ALDSQQREILRNVLYRNIG 863
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ ++P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSIVPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNR-FGQALDSQQR-----EILRNVL 858
>gi|229513904|ref|ZP_04403366.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TMA 21]
gi|229349085|gb|EEO14042.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TMA 21]
Length = 876
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|295687464|ref|YP_003591157.1| UTP-Glnb uridylyltransferase GlnD [Caulobacter segnis ATCC 21756]
gi|295429367|gb|ADG08539.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter segnis ATCC 21756]
Length = 940
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN+ DATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 834 PSVTVDNDASDDATVVEASGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQ 893
Query: 75 DCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSV 108
G+KI + I+ ++ LE + + AP+ R +
Sbjct: 894 TAQGEKITETRRINALKADLLDALEQNEAGAPAARPGL 931
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+++ T +E +G DRPGL + LAD ++ +A I + +RA +V + G I
Sbjct: 843 SDDATVVEASGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQT-AQGEKIT 901
Query: 173 DPKRLSTIKELLFNVL 188
+ +R++ +K L + L
Sbjct: 902 ETRRINALKADLLDAL 917
>gi|148825740|ref|YP_001290493.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229847338|ref|ZP_04467440.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
gi|166226151|sp|A5UBF9.1|GLND_HAEIE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148715900|gb|ABQ98110.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229809763|gb|EEP45487.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
Length = 863
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + +
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLSALSITPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+ GL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|229522208|ref|ZP_04411625.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|419837969|ref|ZP_14361407.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|421354961|ref|ZP_15805293.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|423735926|ref|ZP_17709118.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|424010264|ref|ZP_17753198.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
gi|229341133|gb|EEO06138.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|395954086|gb|EJH64699.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|408629352|gb|EKL02051.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|408856517|gb|EKL96212.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|408863294|gb|EKM02784.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
Length = 876
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|153007502|ref|YP_001368717.1| PII uridylyl-transferase [Ochrobactrum anthropi ATCC 49188]
gi|166232253|sp|A6WV84.1|GLND_OCHA4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|151559390|gb|ABS12888.1| metal dependent phosphohydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 934
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVLRG 190
I+ L VL G
Sbjct: 906 QGNIRRKLLGVLSG 919
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
>gi|153820325|ref|ZP_01972992.1| [Protein-PII] uridylyltransferase, partial [Vibrio cholerae NCTC
8457]
gi|126509132|gb|EAZ71726.1| [Protein-PII] uridylyltransferase [Vibrio cholerae NCTC 8457]
Length = 334
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 135 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 194
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 195 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 254
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ T +EF D PGL + V A A+L+ ++ A+I T +RA
Sbjct: 255 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERA 296
>gi|254226776|ref|ZP_04920350.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
gi|125620714|gb|EAZ49074.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
Length = 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 297 IRHV-----DGLPISSEAER-ERVIQCLEAAIE-----RRASEGLELELCTEDRVGLLSD 345
IRH+ DG P + +A R R +Q + + ++ + +E D GLL+
Sbjct: 760 IRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKRTLMEFVALDTPGLLAT 819
Query: 346 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 395
+ F E +L + A+I+TIG + +D F +T+ G +D + +R ++
Sbjct: 820 VGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLDEEEEQHLREKL 869
>gi|304312446|ref|YP_003812044.1| PII uridylyl-transferase [gamma proteobacterium HdN1]
gi|301798179|emb|CBL46401.1| PII uridylyl-transferase (Uridylyl-removing enzyme) [gamma
proteobacterium HdN1]
Length = 902
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
L++ T DR GLL++I +IF + + I+ A+I+T G + +D FY+TD G + DP+ +
Sbjct: 830 LDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDTNGEMLHDPEFCAT 889
Query: 391 IRRQI 395
++ ++
Sbjct: 890 LKERL 894
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 20 DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDG 78
D AT + + + + + + L +NL I A I++ + +D + +++ G
Sbjct: 711 DERKYQGATQVFIYAKDAPNLFAATVAALTQLNLTIADARIITAANQYTLDTYVIMEEGG 770
Query: 79 KKIRDKEVIDYIQQRLET---------DASFAPSLRSSVGVMPTEE----------HTSI 119
+ D+ I+ I ++L T D P R+ E T +
Sbjct: 771 AAVVDETRIEQIARKLRTTLADPTRFPDIVHRPLPRALKHFRVATEITLANDLDSRATVL 830
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
+ T DRPGL +E+ + + A+I T +RA V ++TD + G + DP+ +T
Sbjct: 831 DITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITD-TNGEMLHDPEFCAT 889
Query: 180 IKELL 184
+KE L
Sbjct: 890 LKERL 894
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 46/78 (58%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
+ + N+ + ATV+ + ++++ G+L ++ ++ ++I+ A I++ G DVF + D
Sbjct: 817 ITLANDLDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDT 876
Query: 77 DGKKIRDKEVIDYIQQRL 94
+G+ + D E +++RL
Sbjct: 877 NGEMLHDPEFCATLKERL 894
>gi|404317041|ref|ZP_10964974.1| PII uridylyl-transferase [Ochrobactrum anthropi CTS-325]
Length = 934
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVLRG 190
I+ L VL G
Sbjct: 906 QGNIRRKLLGVLSG 919
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
>gi|307129818|ref|YP_003881834.1| uridylyltransferase/uridylyl-removing enzyme [Dickeya dadantii
3937]
gi|306527347|gb|ADM97277.1| uridylyltransferase/uridylyl-removing enzyme [Dickeya dadantii
3937]
Length = 893
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 693 VNKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 752
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R + I+Q L P +R + VG +PT
Sbjct: 753 FIVLEPDGSPLAPDRHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGFLPTHT 812
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL+ ++ A I T +R
Sbjct: 813 DRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGER 854
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E ++P V + + + T I + S DRP L + L V + T R
Sbjct: 689 LEHDVNKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 748
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 331
A F + DG P++ + + + +E A+ RR S L
Sbjct: 749 AMDTFIVLEPDGSPLAPD-RHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGF 807
Query: 332 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
+EL D+ GLL+ + +F + +LS+ A ISTIG +V+D F + D
Sbjct: 808 LPTHTDRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSERR 867
Query: 382 PVDPKI 387
+ P++
Sbjct: 868 ALSPEL 873
>gi|15642260|ref|NP_231893.1| PII uridylyl-transferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586159|ref|ZP_01675950.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121729748|ref|ZP_01682187.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|147673286|ref|YP_001217777.1| PII uridylyl-transferase [Vibrio cholerae O395]
gi|153217366|ref|ZP_01951117.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|153823644|ref|ZP_01976311.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|153827573|ref|ZP_01980240.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227082386|ref|YP_002810937.1| PII uridylyl-transferase [Vibrio cholerae M66-2]
gi|227118708|ref|YP_002820604.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254849392|ref|ZP_05238742.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|298500363|ref|ZP_07010168.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
gi|9656824|gb|AAF95406.1| protein-P-II uridylyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549571|gb|EAX59595.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121628499|gb|EAX60985.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|124113612|gb|EAY32432.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|126518839|gb|EAZ76062.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|146315169|gb|ABQ19708.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|149737953|gb|EDM52858.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227010274|gb|ACP06486.1| protein-P-II uridylyltransferase [Vibrio cholerae M66-2]
gi|227014158|gb|ACP10368.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254845097|gb|EET23511.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|297541056|gb|EFH77110.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
Length = 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|422923565|ref|ZP_16956712.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|424591969|ref|ZP_18031393.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
gi|341643854|gb|EGS68116.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|408029997|gb|EKG66678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
Length = 876
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|374986229|ref|YP_004961724.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
gi|297156881|gb|ADI06593.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
Length = 883
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ +D GLL I R + ++++ A +ST+G D FYVTD +G P+ P +
Sbjct: 814 IEVRAQDAPGLLHRIGRALEDAGVTVRSAHVSTLGANAVDAFYVTDASGAPLQPMRAAEV 873
Query: 392 RRQIGHT 398
+++ T
Sbjct: 874 AKEVERT 880
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
Y K RR PPRV + + ATVI+V + + G+L ++ + L D + ++ A++
Sbjct: 785 YRKYPRRRGVHAPPPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEDAGVTVRSAHV 844
Query: 61 SSDGGWFMDVFNVIDCDG---KKIRDKEVIDYIQQRL 94
S+ G +D F V D G + +R EV +++ L
Sbjct: 845 STLGANAVDAFYVTDASGAPLQPMRAAEVAKEVERTL 881
>gi|153803000|ref|ZP_01957586.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
gi|124121443|gb|EAY40186.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
Length = 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 297 IRHV-----DGLPISSEAER-ERVIQCLEAAIE-----RRASEGLELELCTEDRVGLLSD 345
IRH+ DG P + +A R R +Q + + ++ + +E D GLL+
Sbjct: 760 IRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKRTLMEFVALDTPGLLAT 819
Query: 346 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 395
+ F E +L + A+I+TIG + +D F +T+ G +D + +R ++
Sbjct: 820 VGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLDEEEEQHLREKL 869
>gi|254286066|ref|ZP_04961027.1| protein-P-II uridylyltransferase [Vibrio cholerae AM-19226]
gi|150423976|gb|EDN15916.1| protein-P-II uridylyltransferase [Vibrio cholerae AM-19226]
Length = 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|417825496|ref|ZP_12472084.1| protein-P-II uridylyltransferase [Vibrio cholerae HE48]
gi|340046981|gb|EGR07911.1| protein-P-II uridylyltransferase [Vibrio cholerae HE48]
Length = 876
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|422308202|ref|ZP_16395355.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1035(8)]
gi|408618067|gb|EKK91156.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1035(8)]
Length = 876
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|421351981|ref|ZP_15802346.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
gi|395952426|gb|EJH63040.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
Length = 876
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|153828190|ref|ZP_01980857.1| protein-P-II uridylyltransferase [Vibrio cholerae 623-39]
gi|148876279|gb|EDL74414.1| protein-P-II uridylyltransferase [Vibrio cholerae 623-39]
Length = 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|399544195|ref|YP_006557503.1| [protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
gi|399159527|gb|AFP30090.1| [Protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
Length = 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ T DR GLL+ I ++ E+ + + A+I+T+G +V+D F+VTD GN + DP +
Sbjct: 809 LEVITPDRPGLLARIGQVLLEHKVRLTTAKIATLGERVEDVFFVTDENGNALCDPAACQA 868
Query: 391 IR 392
++
Sbjct: 869 LQ 870
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 47 VLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKI-----RDKEVIDYIQQRLETDASF 100
VL +NL I A ISS DG W + + V+D G+ + R + V + + L+ +
Sbjct: 716 VLEQLNLNIVDARISSSDGPWSISSYVVLDDHGQPLGIDPDRKERVRSRLIEELDDPEDY 775
Query: 101 APSLRSSVG------VMPTEE---------HTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
+ PTE T +E DRPGL + + VL + +
Sbjct: 776 PDIIHRRTPRQLKHFAFPTEVLLSNDSFNLRTVLEVITPDRPGLLARIGQVLLEHKVRLT 835
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V VTD + G A+ DP +++ L L
Sbjct: 836 TAKIATLGERVEDVFFVTDEN-GNALCDPAACQALQDDLCKTL 877
>gi|229507664|ref|ZP_04397169.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229512141|ref|ZP_04401620.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229519276|ref|ZP_04408719.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229524265|ref|ZP_04413670.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229607168|ref|YP_002877816.1| PII uridylyl-transferase [Vibrio cholerae MJ-1236]
gi|255747043|ref|ZP_05420988.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262161413|ref|ZP_06030523.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|262168262|ref|ZP_06035959.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|360036138|ref|YP_004937901.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742066|ref|YP_005334035.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|384425225|ref|YP_005634583.1| [protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|417814289|ref|ZP_12460942.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|417818026|ref|ZP_12464655.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|418335271|ref|ZP_12944182.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|418338880|ref|ZP_12947774.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|418346804|ref|ZP_12951562.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|418350566|ref|ZP_12955297.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|418355711|ref|ZP_12958430.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|419827220|ref|ZP_14350719.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|421317962|ref|ZP_15768530.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|421322018|ref|ZP_15772571.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|421325820|ref|ZP_15776344.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|421329478|ref|ZP_15779988.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|421333434|ref|ZP_15783911.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|421336976|ref|ZP_15787437.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|421340404|ref|ZP_15790836.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|421348410|ref|ZP_15798787.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|422897359|ref|ZP_16934803.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|422903557|ref|ZP_16938527.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|422907442|ref|ZP_16942240.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|422914286|ref|ZP_16948791.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|422926490|ref|ZP_16959503.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|423145812|ref|ZP_17133406.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|423150488|ref|ZP_17137802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|423154307|ref|ZP_17141488.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|423157390|ref|ZP_17144483.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|423160961|ref|ZP_17147901.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|423165788|ref|ZP_17152512.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|423731810|ref|ZP_17705113.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|423769093|ref|ZP_17713231.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|423895955|ref|ZP_17727434.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|423931487|ref|ZP_17731827.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|424003240|ref|ZP_17746315.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|424007031|ref|ZP_17750001.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|424025011|ref|ZP_17764661.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|424027897|ref|ZP_17767499.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|424587177|ref|ZP_18026755.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|424595829|ref|ZP_18035148.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|424599742|ref|ZP_18038920.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|424602503|ref|ZP_18041643.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|424607436|ref|ZP_18046377.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|424611254|ref|ZP_18050093.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|424614069|ref|ZP_18052854.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|424622827|ref|ZP_18061332.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|424645790|ref|ZP_18083525.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|424653561|ref|ZP_18090941.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|424657380|ref|ZP_18094665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|440710501|ref|ZP_20891149.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443504608|ref|ZP_21071564.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443508509|ref|ZP_21075270.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443512353|ref|ZP_21078988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443515907|ref|ZP_21082417.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443519701|ref|ZP_21086094.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443524592|ref|ZP_21090802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443532186|ref|ZP_21098200.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443535994|ref|ZP_21101865.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443539527|ref|ZP_21105381.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|449055281|ref|ZP_21733949.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
gi|50402122|sp|Q9KPV0.2|GLND_VIBCH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229337846|gb|EEO02863.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229343965|gb|EEO08940.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229352106|gb|EEO17047.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229355169|gb|EEO20090.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229369823|gb|ACQ60246.1| [Protein-PII] uridylyltransferase [Vibrio cholerae MJ-1236]
gi|255735445|gb|EET90845.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262023154|gb|EEY41858.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|262028724|gb|EEY47378.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|327484778|gb|AEA79185.1| [Protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|340036775|gb|EGQ97751.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|340037749|gb|EGQ98724.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|341620497|gb|EGS46268.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|341620633|gb|EGS46400.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|341621242|gb|EGS46989.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|341636528|gb|EGS61223.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|341645880|gb|EGS70004.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|356416647|gb|EHH70272.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|356417810|gb|EHH71423.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|356422650|gb|EHH76124.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|356427999|gb|EHH81230.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|356430522|gb|EHH83731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|356431788|gb|EHH84988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|356439280|gb|EHH92267.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|356444238|gb|EHH97050.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|356445062|gb|EHH97871.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|356450289|gb|EHI03019.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|356452209|gb|EHI04888.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|356647292|gb|AET27347.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795576|gb|AFC59047.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|395916220|gb|EJH27050.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|395917658|gb|EJH28486.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|395919012|gb|EJH29836.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|395928012|gb|EJH38775.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|395928836|gb|EJH39589.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|395932075|gb|EJH42819.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|395939687|gb|EJH50369.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|395942989|gb|EJH53665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|395958328|gb|EJH68824.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|395958738|gb|EJH69209.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|395970366|gb|EJH80137.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|395972525|gb|EJH82115.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|395975181|gb|EJH84678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|408006605|gb|EKG44743.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|408011829|gb|EKG49630.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|408031198|gb|EKG67835.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|408041099|gb|EKG77239.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|408042427|gb|EKG78479.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|408052501|gb|EKG87540.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|408608010|gb|EKK81413.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|408622742|gb|EKK95712.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|408633370|gb|EKL05731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|408653714|gb|EKL24869.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|408654657|gb|EKL25792.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|408844885|gb|EKL85008.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|408845774|gb|EKL85889.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|408869891|gb|EKM09178.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|408878520|gb|EKM17521.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|439973830|gb|ELP50034.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443431079|gb|ELS73633.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443434917|gb|ELS81063.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443438741|gb|ELS88459.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443442844|gb|ELS96147.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443446700|gb|ELT03359.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443449450|gb|ELT09744.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443457576|gb|ELT24973.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443460884|gb|ELT31964.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443465627|gb|ELT40287.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|448265323|gb|EMB02558.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
Length = 876
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|424618043|ref|ZP_18056714.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
gi|395961418|gb|EJH71746.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
Length = 876
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|429888049|ref|ZP_19369548.1| [Protein-PII] uridylyltransferase [Vibrio cholerae PS15]
gi|429224925|gb|EKY31233.1| [Protein-PII] uridylyltransferase [Vibrio cholerae PS15]
Length = 876
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|319789629|ref|YP_004151262.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
gi|317114131|gb|ADU96621.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
Length = 874
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ T DR+G+L IT++ E ++RA I+T G +V D+FY+TD+ V DP+ +
Sbjct: 802 VEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTEGNRVIDSFYITDMDYKKVTDPQKLLR 861
Query: 391 IRRQIGHTKLQVKRSTILAPKP 412
I+ +I L+PKP
Sbjct: 862 IKERIVEA---------LSPKP 874
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 7 KLIRRMNP---PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
K RR P +V +DN T T+++V + ++ G+L + +VL + +++A I+++
Sbjct: 776 KTFRRSVPLPETKVKVDNETSDKYTIVEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTE 835
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
G +D F + D D KK+ D + + I++R+
Sbjct: 836 GNRVIDSFYITDMDYKKVTDPQKLLRIKERI 866
>gi|357454137|ref|XP_003597349.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
gi|355486397|gb|AES67600.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
Length = 421
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 27/278 (9%)
Query: 21 NNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKK 80
N D +I V+ +K G+ + + + L I K +S+DG W V VI
Sbjct: 16 GNKPGDPFIITVNCPDKTGLACDICRFILHFGLCILKGDVSTDGVWCYIVLWVIP--QSI 73
Query: 81 IRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS----IEFTGTDRPGLFSEVCAV 136
+ + Y++ RL+ + P +S ++ +S ++F DR GL +V V
Sbjct: 74 LLPRMSYSYLKDRLQ---AICPPCVASFYLVQKPTTSSPVYLLKFCCLDRKGLLHDVTKV 130
Query: 137 LADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195
L +L + ++ T D + + VTD+ + KR + E L VL D
Sbjct: 131 LCELELTIQRVKVTTTPDGKVLDLFFVTDNME--LLHTRKRQNETCERLNAVLG--DSCI 186
Query: 196 KAKTSLSPP------GIMNRE----RRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL 245
K + L+ P GI + L Q D D +A+ K + +
Sbjct: 187 KCELQLAGPEYEHNQGISSLSPVLANELFQCELSDNDVR--SQALSPDMKKLKKANAALD 244
Query: 246 N-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 282
N + + +T++ ++ D LL+DI+ TL DM + + +G
Sbjct: 245 NSLSQAHTLLQIQCADHKGLLYDIMRTLKDMNFKISYG 282
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 241 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY-IRH 299
Q+ + N D +IT+ D+ L DI + + G V+T Y + I
Sbjct: 12 QIQLGNKPGDPFIITVNCPDKTGLACDICRFILHFGLCILKGDVSTDGVWCYIVLWVIPQ 71
Query: 300 VDGLP-ISSEAERERVIQCLEAAIER--------RASEGLELELCTEDRVGLLSDITRIF 350
LP +S ++R+ + +S L+ C DR GLL D+T++
Sbjct: 72 SILLPRMSYSYLKDRLQAICPPCVASFYLVQKPTTSSPVYLLKFCCLDRKGLLHDVTKVL 131
Query: 351 RENSLSIKRAEISTI-GGKVKDTFYVTD 377
E L+I+R +++T GKV D F+VTD
Sbjct: 132 CELELTIQRVKVTTTPDGKVLDLFFVTD 159
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWF 67
++++ +DN+ T++++ + G+L +++ L D+N I ++ + G+
Sbjct: 233 MKKLKKANAALDNSLSQAHTLLQIQCADHKGLLYDIMRTLKDMNFKISYGRFLPNVMGYR 292
Query: 68 -MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTG 123
+D+F + DGKKI D E + + RL+ + P + P E +E +G
Sbjct: 293 DLDIF-IQQKDGKKILDPEKQNALCSRLKLEM-LHPLRVTIADRGPDTELLVANPVELSG 350
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F +V L L + +AE+
Sbjct: 351 NGRPRVFYDVTFALKTLGICIFSAEV 376
>gi|417821593|ref|ZP_12468207.1| protein-P-II uridylyltransferase [Vibrio cholerae HE39]
gi|419830711|ref|ZP_14354196.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-1A2]
gi|419834394|ref|ZP_14357849.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A2]
gi|422918100|ref|ZP_16952418.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02A1]
gi|423823002|ref|ZP_17717012.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55C2]
gi|423856967|ref|ZP_17720819.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59A1]
gi|423883595|ref|ZP_17724406.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-60A1]
gi|423957568|ref|ZP_17735311.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-40]
gi|423985548|ref|ZP_17738862.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-46]
gi|423998525|ref|ZP_17741777.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02C1]
gi|424017422|ref|ZP_17757251.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55B2]
gi|424020347|ref|ZP_17760130.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59B1]
gi|424625721|ref|ZP_18064182.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A1]
gi|424630209|ref|ZP_18068493.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-51A1]
gi|424634253|ref|ZP_18072353.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-52A1]
gi|424637330|ref|ZP_18075338.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55A1]
gi|424641238|ref|ZP_18079121.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A1]
gi|424649306|ref|ZP_18086969.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A1]
gi|443528223|ref|ZP_21094267.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-78A1]
gi|340039224|gb|EGR00199.1| protein-P-II uridylyltransferase [Vibrio cholerae HE39]
gi|341636982|gb|EGS61676.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02A1]
gi|408011662|gb|EKG49469.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A1]
gi|408017616|gb|EKG55107.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-52A1]
gi|408022723|gb|EKG59918.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A1]
gi|408023118|gb|EKG60298.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55A1]
gi|408032022|gb|EKG68621.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A1]
gi|408054177|gb|EKG89163.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-51A1]
gi|408620484|gb|EKK93496.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-1A2]
gi|408634978|gb|EKL07213.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55C2]
gi|408640314|gb|EKL12110.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59A1]
gi|408640661|gb|EKL12449.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-60A1]
gi|408649216|gb|EKL20533.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A2]
gi|408656672|gb|EKL27766.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-40]
gi|408663665|gb|EKL34527.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-46]
gi|408852424|gb|EKL92252.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02C1]
gi|408859619|gb|EKL99276.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55B2]
gi|408866924|gb|EKM06295.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59B1]
gi|443453481|gb|ELT17304.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-78A1]
Length = 876
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|163757730|ref|ZP_02164819.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
gi|162285232|gb|EDQ35514.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
Length = 953
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 239 RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
RPQVT+ N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 833 RPQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYV 892
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASE 328
R + G+ I++E + ++ L+A + + E
Sbjct: 893 RDLVGMKITNENRQTNIVARLKAVLAKEDDE 923
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+EL DR GLLS+IT + + SL I A I+T G KV DTFYV D+ G
Sbjct: 849 IELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVRDLVG 897
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V I N TVI+++ +++ G+L ++ VL+D++L I A+I++ G +D F V
Sbjct: 834 PQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVR 893
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 894 DLVGMKITNENRQTNIVARLKA 915
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ +VL+DL ++ +A I T ++ +V D G I + R
Sbjct: 847 TVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVRD-LVGMKITNENR 905
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ I L VL DD + + PPG++
Sbjct: 906 QTNIVARLKAVLAKEDDELRDQM---PPGMI 933
>gi|297580906|ref|ZP_06942831.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
gi|297534732|gb|EFH73568.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
Length = 881
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|422911100|ref|ZP_16945728.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|424660765|ref|ZP_18098012.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
gi|341632472|gb|EGS57338.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|408050138|gb|EKG85311.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
Length = 876
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 739 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 799 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|398782192|ref|ZP_10546010.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
gi|396996929|gb|EJJ07908.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
Length = 836
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + HG+L ++ + L + ++ A+IS+ G +D F V
Sbjct: 752 PPRVSAVTGSSRTATVIEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYV 811
Query: 74 IDCDGKKI 81
D DG+ +
Sbjct: 812 TDPDGEPL 819
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ +D GLL I R ++++ A IST+G D FYVTD G P+
Sbjct: 768 IEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYVTDPDGEPL 819
>gi|418296832|ref|ZP_12908675.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355539007|gb|EHH08249.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 942
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
>gi|421344317|ref|ZP_15794720.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
gi|395940397|gb|EJH51078.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
Length = 861
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 662 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 721
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 722 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 781
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 782 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 831
>gi|114571561|ref|YP_758241.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
gi|114342023|gb|ABI67303.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
Length = 936
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSE-- 308
T + + S DR ++ DIV ++ V +NT + + + FYI+ G P
Sbjct: 731 TEVMIWSPDRERVFADIVAAFAEVGADVVGATINTTTSRQVFDIFYIQDAAGQPYGKHDA 790
Query: 309 AERERVIQCL------EAAIERRASEGLE------------------------LELCTED 338
+R+ ++ L E + RR + L+ +E D
Sbjct: 791 VQRQALVGYLREVATGEVTVRRRPAAPLKRRDAAFRVTPSVTISNEIAEQATVIEASGRD 850
Query: 339 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIR 392
R GLL+D+ + + L++ A+I G + D FYVT VD I +S+R
Sbjct: 851 RPGLLADLADVLADEGLALTSAQIDGYGERATDVFYVTHKDEKLVDEAISESVR 904
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 97 DASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
DA+F + ++ E+ T IE +G DRPGL +++ VLAD + +A+I + +RA
Sbjct: 822 DAAFRVTPSVTISNEIAEQATVIEASGRDRPGLLADLADVLADEGLALTSAQIDGYGERA 881
Query: 157 AAVVHVT 163
V +VT
Sbjct: 882 TDVFYVT 888
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N ATVI+ ++ G+L + VL D L + A I G DVF V
Sbjct: 829 PSVTISNEIAEQATVIEASGRDRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYVT 888
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D +K+ D+ + + ++ L
Sbjct: 889 HKD-EKLVDEAISESVRNGL 907
>gi|312113912|ref|YP_004011508.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
gi|311219041|gb|ADP70409.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
Length = 917
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP +VIDN + TVI+V ++++ G+L + + +D+ L I A+I++ G +DVF V
Sbjct: 831 PPDIVIDNTASQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYV 890
Query: 74 IDCDGKKIRDK 84
+K+ D+
Sbjct: 891 TGPGKQKVTDE 901
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDS- 390
+E+ DR GLL D+ R F + L I A I+T G K D FYVT P K+ D
Sbjct: 847 IEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYVT----GPGKQKVTDEA 902
Query: 391 ----IRRQI 395
IR QI
Sbjct: 903 TKSRIRGQI 911
>gi|402824693|ref|ZP_10874039.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
gi|402261772|gb|EJU11789.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
Length = 917
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN TV+++++ ++ +L ++ L + L++ A+I++ G D F V
Sbjct: 824 PRVLFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG 109
D G+KI I I++RL +A+ PSL +V
Sbjct: 884 DLLGEKITAAPRIKAIERRL-LEATSEPSLEEAVA 917
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 112/275 (40%), Gaps = 35/275 (12%)
Query: 56 KKAYISSDGGWF---MDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAPSLRSSVGVM 111
KKA + + GG + ++ I D I + E D I + L + DAS L S
Sbjct: 663 KKAQVEAMGGAYAALVEKVGAILGDAYWIAEPE--DVIARNLIQLDASDDEPLSISTEYY 720
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + +D PGLF + + N+++A I H R V + +
Sbjct: 721 PARGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARI--HTTRTGRAV------DNFLV 772
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+DP L Y R+ + ++ + NR + L Q++ A
Sbjct: 773 QDP---------LGRPFMEYGQLRRLELTIEN-ALANRIKILPQLVAK-------PDARP 815
Query: 232 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R + RP+V N + +TV+ + ++DRP LL + L + + +V + T
Sbjct: 816 RADAFDVRPRVLFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGER 875
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQ--CLEAAIE 323
A FY+ + G I++ A R + I+ LEA E
Sbjct: 876 AADTFYVTDLLGEKITA-APRIKAIERRLLEATSE 909
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD--PKI 387
+E+ DR LL+ + E+ L + A I+T G + DTFYVTD+ G + P+I
Sbjct: 839 VEINARDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVTDLLGEKITAAPRI 896
>gi|284992396|ref|YP_003410950.1| UTP-GlnB uridylyltransferase, GlnD [Geodermatophilus obscurus DSM
43160]
gi|284065641|gb|ADB76579.1| UTP-GlnB uridylyltransferase, GlnD [Geodermatophilus obscurus DSM
43160]
Length = 791
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+VGV + + G DR GLFS++ VLA +V A++ DRA AV
Sbjct: 588 AVGVEDVADGQQVTIVGPDRHGLFSQLAGVLALNQLDVRAAKVNVVGDRATAV------- 640
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
+A++ + + +L + +R + G + RL Q R+ +
Sbjct: 641 --FAVRPRFGRAPVASILADAVRAALE-----------GTLPLAERLRQ-----READYR 682
Query: 227 EKAVGRVEDKSSRPQVTVLNIE--KDYT-VITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 283
+ AV +++ P+++ N E D T ++ +R+ DR LL+ + L V
Sbjct: 683 QDAV-----RATPPRISWHNGEVTGDATGIVEVRAGDRAGLLYRLTAALATEGLDVTSAR 737
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERV 314
+ T +A FY+ + G PI SE +R RV
Sbjct: 738 IETLGADAADHFYVCNPSGEPIGSE-QRSRV 767
>gi|299132879|ref|ZP_07026074.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
gi|298593016|gb|EFI53216.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
Length = 961
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+T IE TG DRPGL ++ ++ L N+ +A + T +R V +VTD G I P
Sbjct: 880 YTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQITAPT 938
Query: 176 RLSTIKELLFNVLRGYDDFR 195
R + IK L ++L D R
Sbjct: 939 RQAAIKRALVHLLANPDTTR 958
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+E+ DR GLL +T + SL+I A ++T G +V+D FYVTD+ G + P +
Sbjct: 883 IEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAA 942
Query: 391 IRRQIGH 397
I+R + H
Sbjct: 943 IKRALVH 949
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVI+N TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V
Sbjct: 868 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 927
Query: 75 DCDGKKI 81
D G +I
Sbjct: 928 DLMGAQI 934
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 27/224 (12%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
DAS L VG T + D P L S V A N+V+A+I+T D
Sbjct: 750 ADAS-GKKLAIEVGFEEGRAVTELTLLAPDHPWLLSIVAGACAANGANIVDAQIYTTTDG 808
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 215
A + +R S I E++ VL G K L P +M R
Sbjct: 809 LALDTIAISREYDRNEDEARRASRIGEMIEQVLEG-------KVRL--PEVMAR------ 853
Query: 216 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTD 274
R R + V VE P+V + N D YTVI + DRP LL+ + ++
Sbjct: 854 -----RTQARAKTKVFVVE-----PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISK 903
Query: 275 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 318
+ + V T FY+ + G I++ + + + L
Sbjct: 904 LSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAAIKRAL 947
>gi|430001964|emb|CCF17744.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Rhizobium sp.]
Length = 946
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V++ N TV++V+ +++ G+L ++ VL D++L I A I++ G +D F V
Sbjct: 825 PPSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 885 TDLLGTKITNENRQGNISARLKA 907
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLL++IT + + SL I A I+T G KV DTFYVTD+ G +
Sbjct: 847 DRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYVTDLLGTKI 892
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 102 PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
PS+ S G+ + + T +E DRPGL +E+ AVLADL ++ +A I T ++ +
Sbjct: 826 PSVILSNGL--SNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFY 883
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
VTD G I + R I L V+ +D + S P GI+
Sbjct: 884 VTD-LLGTKITNENRQGNISARLKAVMAEQEDELR---SGMPSGII 925
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 28/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I D P L S + + N+ +A+I+T +D A + + + +R
Sbjct: 728 TEITVLAPDHPRLLSVIAGACSAAGANIADAQIFTTSDGRALDTILINREFPVDEDELRR 787
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER-RLHQIMFDDRDYERVEKAVGRVED 235
+TI ++ +VL G P I R + + MFD
Sbjct: 788 AATIGRMIEDVLSGKKRL--------PEVIATRAKAKRRNKMFD---------------- 823
Query: 236 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
P V + N + +TV+ + DRP LL +I L D+ + + T +
Sbjct: 824 --IPPSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDT 881
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
FY+ + G I++E + + L+A + + E
Sbjct: 882 FYVTDLLGTKITNENRQGNISARLKAVMAEQEDE 915
>gi|325294777|ref|YP_004281291.1| uridylyltransferase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065225|gb|ADY73232.1| UTP-GlnB uridylyltransferase, GlnD [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 874
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 11 RMNPP----RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R N P +V IDN T T+++V + ++ G+L + +VL ++N +++A I+++G
Sbjct: 782 RRNIPLPVNKVKIDNKTSDRYTIVEVSTYDRLGVLYAITKVLLEMNTRLRRAIIATEGNR 841
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+D F + D + +KI D +++ I++++
Sbjct: 842 VIDSFYITDMEYRKITDAKLLKEIEEKI 869
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ T DR+G+L IT++ E + ++RA I+T G +V D+FY+TD+ + D K++
Sbjct: 805 VEVSTYDRLGVLYAITKVLLEMNTRLRRAIIATEGNRVIDSFYITDMEYRKITDAKLLKE 864
Query: 391 IRRQI 395
I +I
Sbjct: 865 IEEKI 869
>gi|159184269|ref|NP_353378.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
gi|22256761|sp|Q8UIF1.1|GLND_AGRT5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|159139596|gb|AAK86163.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
Length = 942
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
+ G ++++ + + Q L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|218782918|ref|YP_002434236.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
gi|218764302|gb|ACL06768.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
Length = 893
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD A +RR RV +DN++ T+++V + ++ G+L ++ L L I A I+
Sbjct: 772 DDNSASALRR---ERVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIA 828
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQR-LET 96
+ +DVF V D DG+K+ E +D I+Q LET
Sbjct: 829 TKADQVVDVFYVRDFDGQKVDSPESVDAIKQTVLET 864
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 49/216 (22%)
Query: 221 RDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
R YER++ A +E SR + + +T+ +KDRP L I LT +F
Sbjct: 660 RLYERLQGADAVIEAAPSR--------DANLRTVTVCAKDRPGLFSKIAGVLTLNNLNIF 711
Query: 281 HGMVNTGRTEAYQEFYIRHVDGLPISSEAER---ERVIQCLEAAI--ERRASEGLE---- 331
+ T R + + P+ S E+ +RV + L + E S+ LE
Sbjct: 712 DAQIFTWRNHTAMDIFQV---SPPLDSLFEKRTWQRVERDLGKVLSGEMDLSKALEDKPV 768
Query: 332 ----------------------------LELCTEDRVGLLSDITRIFRENSLSIKRAEIS 363
+E+ D++GLL IT L I A+I+
Sbjct: 769 AKSDDNSASALRRERVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIA 828
Query: 364 TIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQIGHT 398
T +V D FYV D G VD P+ +D+I++ + T
Sbjct: 829 TKADQVVDVFYVRDFDGQKVDSPESVDAIKQTVLET 864
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 54/253 (21%)
Query: 84 KEVIDYIQ--QRLE-TDASF--APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLA 138
KE++D+I+ +RL+ DA APS +++ ++ DRPGLFS++ VL
Sbjct: 653 KEIVDHIRLYERLQGADAVIEAAPSRDANL--------RTVTVCAKDRPGLFSKIAGVLT 704
Query: 139 DLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK 198
+ N+ +A+I+T + A + F V D + +
Sbjct: 705 LNNLNIFDAQIFTWRNHTAMDI------------------------FQVSPPLDSLFEKR 740
Query: 199 TSLSPPGIMNRERRLHQIMFDDRDYERV--EKAVGRVEDKSS----RPQVTVLNIEKD-Y 251
T ER L +++ + D + +K V + +D S+ R +V+V N +
Sbjct: 741 T------WQRVERDLGKVLSGEMDLSKALEDKPVAKSDDNSASALRRERVSVDNDSSGFF 794
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL----PISS 307
T++ + + D+ LL+ I L ++ + T + FY+R DG P S
Sbjct: 795 TIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVFYVRDFDGQKVDSPESV 854
Query: 308 EAERERVIQCLEA 320
+A ++ V++ L
Sbjct: 855 DAIKQTVLETLHG 867
>gi|390169710|ref|ZP_10221643.1| PII uridylyl-transferase [Sphingobium indicum B90A]
gi|389587714|gb|EIM65776.1| PII uridylyl-transferase [Sphingobium indicum B90A]
Length = 919
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 88/224 (39%), Gaps = 31/224 (13%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + D PGLF + + N+++A I T D A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
P +L+ I++ + + L NR R + ++ + R R
Sbjct: 783 HSPDQLTRIRKAIEDSL------------------ANRHRMITKL--EARPLPRTRAEAF 822
Query: 232 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
R+E P V + N + +TVI + ++DRP LLF + L + V V T
Sbjct: 823 RIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGER 877
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLE-AAIERRASEGLELE 333
A FY+ + ++ + E + +Q LE +E E ELE
Sbjct: 878 AVDTFYVTDL----LAGKIESKGRLQTLERRLLEAAGGEVAELE 917
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KI K + +++RL
Sbjct: 886 DLLAGKIESKGRLQTLERRL 905
>gi|335033078|ref|ZP_08526450.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
gi|333795754|gb|EGL67079.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
Length = 942
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
+ G ++++ + + Q L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|126666182|ref|ZP_01737162.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
gi|126629504|gb|EBA00122.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
Length = 881
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
LE+ T DR GLL+ I ++ E+ + + A+I+T+G +V+D F+VTD GN + DP +
Sbjct: 809 LEVITPDRPGLLARIGQVLLEHRVRLTTAKIATLGERVEDVFFVTDENGNALCDPAACQA 868
Query: 391 IR 392
++
Sbjct: 869 LQ 870
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 47 VLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKI-----RDKEVIDYIQQRLETDASF 100
VL +NL I A ISS DG W ++ + V+D G+ + R + V + + L+ +
Sbjct: 716 VLEQLNLNIVHARISSSDGPWSINSYVVLDDHGQPLGIDPDRKERVRSRLIEELDDPEDY 775
Query: 101 APSLRSSVG------VMPTEE---------HTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
+ PTE T +E DRPGL + + VL + +
Sbjct: 776 PDIIHRRTPRQLKHFAFPTEVLLSNDRFNLRTVLEVITPDRPGLLARIGQVLLEHRVRLT 835
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V VTD + G A+ DP +++ L L
Sbjct: 836 TAKIATLGERVEDVFFVTDEN-GNALCDPAACQALQDDLCKTL 877
>gi|221133317|ref|ZP_03559622.1| UTP-GlnB uridylyltransferase, GlnD [Glaciecola sp. HTCC2999]
Length = 876
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+EL D GLL+ I +F + +L+++ A+ISTIG + +D F V+D + + P++ ++
Sbjct: 800 IELEALDTPGLLASIGHVFVDFNLTLRLAKISTIGERAEDVFIVSDEHNHALSPELQLAL 859
Query: 392 RRQIGHTKLQVKRSTIL 408
++QI T Q++ T L
Sbjct: 860 KKQISLTLDQLETETAL 876
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 21 NNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGK 79
N+T T + + ++ + Q+ VL++ NL I A I+ + G+ D V+D D +
Sbjct: 684 NHTTKAGTELLIYGKDRPAVFAQIASVLDNANLSILDANIAITPDGYVFDSIIVVDEDNE 743
Query: 80 KIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPT--------EEHTSIEFT 122
KI E I+Q + E S S R +PT ++ T IE
Sbjct: 744 KIASTERCYKIEQAILAQLNKATREHHNSRKLSRRLKQLNVPTKVRFFSASDDATLIELE 803
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
D PGL + + V D + + A+I T +RA V V+D +A+ +L+ K+
Sbjct: 804 ALDTPGLLASIGHVFVDFNLTLRLAKISTIGERAEDVFIVSDEH-NHALSPELQLALKKQ 862
Query: 183 L 183
+
Sbjct: 863 I 863
>gi|417858727|ref|ZP_12503784.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
gi|338824731|gb|EGP58698.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
Length = 942
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I RL+
Sbjct: 886 TDLFGQKVTNDNRQASIATRLKA 908
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIATRLKAVMSEQED 915
>gi|255556900|ref|XP_002519483.1| amino acid binding protein, putative [Ricinus communis]
gi|223541346|gb|EEF42897.1| amino acid binding protein, putative [Ricinus communis]
Length = 409
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T++++ + G+L +++ L D N+ I + I +D+F ++
Sbjct: 232 VTMDNSLSPGHTLVQIACQDHKGLLYDIMRTLKDYNIKISYGRFSIKQRRNCEIDLF-IV 290
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D + RLE + P + V P E +E +G RP +F
Sbjct: 291 QADGKKIVDPSKQGALCSRLEMEL-LRPLRVAVVSRGPDIELLVANPVELSGNGRPLVFH 349
Query: 132 EVCAVLADLHCNVVNAEI--WTHNDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVL 188
++ L L + +AEI DR V V D G ++ P+ S I+E ++N+L
Sbjct: 350 DITLALKMLSTGIFSAEIRRCMIGDREYEVYRVLLDEGEGLSV--PR--SKIQERVWNML 405
Query: 189 RGYD 192
G+D
Sbjct: 406 MGWD 409
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 25/149 (16%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 297
E D +VIT+ D+ L D+ + + G +T Y F++
Sbjct: 17 ESDLSVITVNCPDKTGLGCDLCRIILFFGLSIVRGDFSTDGKWCYIVFWVAGNSSTRWGL 76
Query: 298 ---RHVDGLPISSEAE-----RERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRI 349
R + P S A R+ ++Q R + L+LC DR GLL ++T +
Sbjct: 77 LKKRLLGVCPSCSSASGIPYYRDELLQ------PPRPPDVFLLKLCCHDRRGLLHNVTEV 130
Query: 350 FRENSLSIKRAEISTI-GGKVKDTFYVTD 377
E L+I++ ++ST G+V D F+VTD
Sbjct: 131 LCELELTIRKVKVSTTPDGRVMDLFFVTD 159
>gi|16124269|ref|NP_418833.1| PII uridylyl-transferase [Caulobacter crescentus CB15]
gi|221232952|ref|YP_002515388.1| PII uridylyl-transferase [Caulobacter crescentus NA1000]
gi|22256766|sp|Q9AC53.1|GLND_CAUCR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798830|sp|B8GWX0.1|GLND_CAUCN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|13421101|gb|AAK22001.1| [protein-pII] uridylyltransferase [Caulobacter crescentus CB15]
gi|220962124|gb|ACL93480.1| protein-PII uridylyltransferase [Caulobacter crescentus NA1000]
Length = 940
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 64/163 (39%), Gaps = 33/163 (20%)
Query: 254 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAER- 311
+ + +KDR L D+ ++ + V V T R +A FY++ V G P E R
Sbjct: 738 VVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRA 797
Query: 312 -ERVIQCLEAAIE--------RRASEGLE----------------------LELCTEDRV 340
R+ LEAA + RR SE +E DR
Sbjct: 798 LRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEASGRDRP 857
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
GLL + + +++LSI+ A I G + D FYV G V
Sbjct: 858 GLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTEGGKV 900
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN+ DATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893
Query: 75 DCDGKKIRD 83
+G K+ D
Sbjct: 894 TTEGGKVTD 902
>gi|325291780|ref|YP_004277644.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|418407873|ref|ZP_12981190.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
gi|325059633|gb|ADY63324.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|358005859|gb|EHJ98184.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
Length = 942
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I RL+
Sbjct: 886 TDLFGQKVTNDNRQASIATRLKA 908
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIATRLKAVMSEQED 915
>gi|296448846|ref|ZP_06890683.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
gi|296253644|gb|EFH00834.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
Length = 896
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 30/211 (14%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQ---VLNDVNLVIKK 57
+A+L+R +N P +D +T + A + V H LL +I + N+V
Sbjct: 669 HARLLRELNNAQAPLATTVDLDTKSGAVELTV-VAQDHRRLLSIIAGACAASGANIVDAH 727
Query: 58 AYISSDGGWFMDVFNV----IDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSS---- 107
+ ++DG +F +D D + R + V DYI++ L E S A + RS+
Sbjct: 728 IFTTADGLALDTIFFSRAFPLDEDETR-RARRVADYIEKALRGEIAISEAVAARSAKDRS 786
Query: 108 --VGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
+ P + T IE +G DR GL ++ +++L+ N+ +A I T +RA
Sbjct: 787 LAFDIAPDIVIDNSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAV 846
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD TG I R +TIK L V
Sbjct: 847 DSFYVTD-LTGGKILSASRQATIKRQLLEVF 876
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ DRVGLL D+T +L+I A I T G + D+FYVTD+TG KI+ +
Sbjct: 808 IEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVTDLTGG----KILSAS 863
Query: 392 RRQIGHTKLQVKRSTILAPKPPKE 415
R + +KR + P +E
Sbjct: 864 R------QATIKRQLLEVFAPARE 881
>gi|408787213|ref|ZP_11198944.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
gi|408486844|gb|EKJ95167.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
Length = 942
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+ PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T ++
Sbjct: 824 TIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVID 881
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
+VTD G + + R ++I + L V+ +D
Sbjct: 882 TFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
+ G ++++ + + Q L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|385330904|ref|YP_005884855.1| [protein-PII] uridylyltransferase [Marinobacter adhaerens HP15]
gi|311694054|gb|ADP96927.1| [protein-PII] uridylyltransferase [Marinobacter adhaerens HP15]
Length = 881
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ T DR GLL+ I ++ E+ + + A+I+T+G +V+D F+VTD G P+
Sbjct: 809 MEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFVTDEHGEPI 860
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V N+T TV++V + ++ G+L ++ QVL + + + A I++ G DVF V
Sbjct: 793 PTEVTFSNDTINQRTVMEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFV 852
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+ IR+ V +QQ L
Sbjct: 853 TDEHGEPIRELAVCQALQQDL 873
>gi|424909280|ref|ZP_18332657.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845311|gb|EJA97833.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 942
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+ PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T ++
Sbjct: 824 TIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVID 881
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
+VTD G + + R ++I + L V+ +D
Sbjct: 882 TFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 240 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 298
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 299 HVDGLPISSEAERERVIQCLEAAIERRASE 328
+ G ++++ + + Q L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|89053388|ref|YP_508839.1| PII uridylyl-transferase [Jannaschia sp. CCS1]
gi|88862937|gb|ABD53814.1| UTP-GlnB (protein PII) uridylyltransferase GlnD [Jannaschia sp.
CCS1]
Length = 914
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 39/217 (17%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTD-HSTGYAIKDP 174
T + F D PG+ + + L+ + NVV+A +T D A AV V D + Y
Sbjct: 725 TRVCFALADHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQDREGSPYEKARL 784
Query: 175 KRLSTI--KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKA 229
RL+T+ K L+ V+ ++ K I RER + I FD+ E
Sbjct: 785 PRLTTMIRKTLMGEVVASEAMEKRDK-------IKKRERPFNVPTTITFDNEGSE----- 832
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
YT+I + ++DRP LL+D+ L + + T
Sbjct: 833 --------------------IYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGV 872
Query: 290 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 326
+ FY++ GL + SE R + + L AI R A
Sbjct: 873 QVVDTFYVKDTFGLKLHSEPRRAALERKLRDAIARVA 909
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+E+ T DR GLL D+ + ++ I A I+T G +V DTFYV D G
Sbjct: 837 IEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYVKDTFG 885
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 821 PTTITFDNEGSEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYV 880
Query: 74 IDCDGKKI 81
D G K+
Sbjct: 881 KDTFGLKL 888
>gi|403713835|ref|ZP_10939894.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
gi|403211941|dbj|GAB94577.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
Length = 792
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
D +++V + ++ G+ VL L +++A +S+D G +D ++V G + D+
Sbjct: 615 GDGQLVEVVAPDRVGLFADTAGVLAAHGLSVRRARLSTDDGIAIDHWHVESPSGARA-DR 673
Query: 85 EVIDYIQQRLETD--ASFAPSLRSSVGV----------MP--TEEHTSIEFTGTDRPGLF 130
E ++ RL + AP R V V +P + T +E TDRPGL
Sbjct: 674 EALERAMLRLRSGDRRGLAPLSRRPVPVPDAPVTRALLVPDAAADATVLELRATDRPGLL 733
Query: 131 SEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+V LA L +V +A + T+ +A V++T+
Sbjct: 734 HDVGRCLAQLTVSVRSAHVATYCGQAVDTVYLTE 767
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 326 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
A++ LEL DR GLL D+ R + ++S++ A ++T G+ DT Y+T+ G+ + P
Sbjct: 716 AADATVLELRATDRPGLLHDVGRCLAQLTVSVRSAHVATYCGQAVDTVYLTEPDGSQLAP 775
Query: 386 KIIDSIRRQI 395
+ + R +
Sbjct: 776 ARVAQVIRSL 785
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 327 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+G +E+ DRVGL +D + + LS++RA +ST G D ++V +G D
Sbjct: 615 GDGQLVEVVAPDRVGLFADTAGVLAAHGLSVRRARLSTDDGIAIDHWHVESPSGARAD 672
>gi|88798256|ref|ZP_01113842.1| PII uridylyl-transferase [Reinekea blandensis MED297]
gi|88779032|gb|EAR10221.1| PII uridylyl-transferase [Reinekea sp. MED297]
Length = 893
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL+DI R FR L++ A IST+G V+D F++ D G P+
Sbjct: 819 VEVVASDRPGLLADIGRCFRRLELTLLNARISTLGEHVEDVFFLVDRQGLPL 870
>gi|307104916|gb|EFN53167.1| hypothetical protein CHLNCDRAFT_136962 [Chlorella variabilis]
Length = 262
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN-- 72
P V IDN + AT++ V+ ++ G LL I L + L I++A + SD V +
Sbjct: 46 PVVKIDNESDPFATIVSVEYGDRLGELLDTIASLKALGLNIRRAKLKSDREHKFYVTDMR 105
Query: 73 -----VIDCDGKKIRDKEVIDYIQQRLETDASFA---PSLRSSV---------------G 109
V ++IR + + +Q E+ A P+ R +V G
Sbjct: 106 TSEKVVRSAKLEEIRLTILQNLLQFHPESGEQLAWGTPAARQAVVTRDIDPTAPLGAKRG 165
Query: 110 VM--------PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+ PT H+ + DRPGL +++ VL D++ NVV+AE+ T A +
Sbjct: 166 ISTQIEVREHPTGTHSVLLVNTLDRPGLLTDIVRVLKDVNLNVVSAEVDTIGRNAMDRFN 225
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
+T H G + DP T+ L + + +G
Sbjct: 226 ITYH--GEPLSDPMCQLTVNALQYYLSQG 252
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP 385
T DR GLL+DI R+ ++ +L++ AE+ TIG D F +T G P+ DP
Sbjct: 187 TLDRPGLLTDIVRVLKDVNLNVVSAEVDTIGRNAMDRFNIT-YHGEPLSDP 236
>gi|399071685|ref|ZP_10750077.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
gi|398043201|gb|EJL36128.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
Length = 962
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 64/161 (39%), Gaps = 33/161 (20%)
Query: 254 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAER- 311
I + +KDR L D+ ++ + V V T R +A F+++ V G P+ E R
Sbjct: 760 IVVAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQDVTGAPLGCENPRA 819
Query: 312 -ERVIQCLEAA-------IERR-----------------------ASEGLELELCTEDRV 340
R+ LEAA +E R ++E +E DR
Sbjct: 820 LRRMADALEAAGRGEPLVMEPRRGGEQSRTAAFSIAPTVVVDNEASNEATVVEASGRDRP 879
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
GLL + R +N LSI+ A I G + D FYV G
Sbjct: 880 GLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQTSEGG 920
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VV+DN +ATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 856 PTVVVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ 915
Query: 75 DCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
+G K+ D + ++ LE + + APS R +
Sbjct: 916 TSEGGKLADVRKVTTLKADLLAALEQNEAGAPSTRPGL 953
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 25/187 (13%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDGKKI- 81
A+A I V + ++ G+ + ++ + N+V + + S G +DVF+V D G +
Sbjct: 755 ANAAEIVVAAKDRRGLFADLALAISSLGGNVVGARVFTSRQG-QALDVFHVQDVTGAPLG 813
Query: 82 -RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPT--------EEHTSIEF 121
+ + + LE P S ++ + PT E T +E
Sbjct: 814 CENPRALRRMADALEAAGRGEPLVMEPRRGGEQSRTAAFSIAPTVVVDNEASNEATVVEA 873
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+G DRPGL + LAD ++ +A I + +RA +V S G + D ++++T+K
Sbjct: 874 SGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQT-SEGGKLADVRKVTTLK 932
Query: 182 ELLFNVL 188
L L
Sbjct: 933 ADLLAAL 939
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 33/202 (16%)
Query: 106 SSVGVMPTEEHTS-IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT-HNDRAAAVVHVT 163
++ G +P + + I DR GLF+++ ++ L NVV A ++T +A V HV
Sbjct: 746 AAEGRVPAGANAAEIVVAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQ 805
Query: 164 DHSTGYAI--KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDR 221
D TG + ++P+ L + + L RG P +M R Q
Sbjct: 806 D-VTGAPLGCENPRALRRMADALEAAGRG------------EPLVMEPRRGGEQ------ 846
Query: 222 DYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 280
R S P V V N + TV+ +DRP LL + TL D +
Sbjct: 847 ---------SRTAAFSIAPTVVVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQ 897
Query: 281 HGMVNTGRTEAYQEFYIRHVDG 302
++ A FY++ +G
Sbjct: 898 SAHIDGYGERAVDAFYVQTSEG 919
>gi|168057125|ref|XP_001780567.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668045|gb|EDQ54661.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 159/393 (40%), Gaps = 63/393 (16%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW-FMDVFNVID 75
VV D + + ++ +K G+ + +V+ + L + K IS+DG W F+ ++ +
Sbjct: 10 VVRKGKNLGDPSEVTINCPDKVGLGCDLARVVFEFGLSVTKGDISTDGRWCFVALWVIPR 69
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE--------FTGTDRP 127
+ +R ++QRLE PS S ++PT +E +DR
Sbjct: 70 SNPSVVR----WSLLKQRLE---DVCPSALGS--MLPTVAPPRLESKKILLLQVRSSDRT 120
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDP--KRLSTIKELL 184
GL +V L ++ + ++ T D RA + VTD+ KDP KR + + L
Sbjct: 121 GLLHDVAQKLWEMELTIHKIKVSTSPDGRAIDLFFVTDNRN----KDPWKKRAEEVTKEL 176
Query: 185 FNVLRGYDDFRKAKTSLSPP---GIMNR---ERRLHQIMFDD------------RDYERV 226
L + + SL+ P G+ I +DD +D+
Sbjct: 177 KEFLG--EPCSHCEISLAGPECGGLTCSPLPASLTKDIFYDDPANFEKDYITSEKDHTNS 234
Query: 227 EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG---M 283
EK R E + + N ++++ + K R LL+D + T+ D V HG M
Sbjct: 235 EKDHIRSECHDNNVFIVENNTSPIHSLLQLNCKSRKGLLYDCLRTVKDFNLQVAHGRIAM 294
Query: 284 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE-----RRASEGLELEL---- 334
+ G +E Y+ +G I+ E++ ++Q LE + + + G + EL
Sbjct: 295 MENGNSEI--NVYVLGPNGQRITDLQEQKVLVQSLEEEVGHPVRIKVGTRGPDTELLVAT 352
Query: 335 ----CTEDRVGLLSDITRIFRENSLSIKRAEIS 363
C R +L D+T + + I +A+I
Sbjct: 353 SIEKCGRGRPRVLYDVTLALKMLDICIFKADIG 385
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS--SDGGWFMDVFNVID 75
+++NNT ++++++ ++ G+L ++ + D NL + I+ +G ++V+ V+
Sbjct: 250 IVENNTSPIHSLLQLNCKSRKGLLYDCLRTVKDFNLQVAHGRIAMMENGNSEINVY-VLG 308
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM-PTEE---HTSIEFTGTDRPGLFS 131
+G++I D + + Q LE + +R VG P E TSIE G RP +
Sbjct: 309 PNGQRITDLQEQKVLVQSLEEEVGHP--VRIKVGTRGPDTELLVATSIEKCGRGRPRVLY 366
Query: 132 EVCAVLADLHCNVVNAEIWTH 152
+V L L + A+I H
Sbjct: 367 DVTLALKMLDICIFKADIGRH 387
>gi|270159640|ref|ZP_06188296.1| protein-P-II uridylyltransferase [Legionella longbeachae D-4968]
gi|269987979|gb|EEZ94234.1| protein-P-II uridylyltransferase [Legionella longbeachae D-4968]
Length = 876
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 282 GMVNTGRTEAYQEF---YIRHVDGLPISSEAERERVIQCLEAAIERR-----ASEGLELE 333
NT R+ QE ++ H D +P+ ++ R + + A+ L
Sbjct: 747 AFFNTQRSIDIQEALSTHLAHSDQMPVVAKRRLSRALAHFNVKTQIHYYDEIANNQTRLF 806
Query: 334 LCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRR 393
L T DR GLL+ I R+F + + A+I T G + +DTFY+T+ + P+ + +R
Sbjct: 807 LVTGDRPGLLATIGRVFSTLKIHLHNAKIVTAGERAEDTFYITNQKNQSLTPEEKEMLRE 866
Query: 394 QI 395
++
Sbjct: 867 KL 868
>gi|85712036|ref|ZP_01043090.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
gi|85694222|gb|EAQ32166.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
Length = 873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 90/188 (47%), Gaps = 20/188 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I + T + V ++ + V VL+ L I A I ++ G+ MD F +
Sbjct: 681 PLILIGDENNYGTTELFVYHHDEGHLFAAVAGVLDSQQLTILDAQILATRDGFVMDTFVL 740
Query: 74 IDCDGKKIRD--------KEVIDYIQQRLETDASFAP--------SLRSSVGVMPTEEH- 116
+ +GK + + + ++D + +R + + P S+++ V +P +
Sbjct: 741 LQRNGKPLTETRRIEEVKQHLLDVLHRRRKVPKNNRPLSRRLKNFSVKTQVNFLPVKHRG 800
Query: 117 -TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
T+ E DRPGL + + A+L L +++ A+I T ++A + V+ H G A+ D +
Sbjct: 801 RTTFELVALDRPGLVARIAAILQRLDVSLLAAKITTIGEQAEDLFIVSSHR-GEALSDEQ 859
Query: 176 RLSTIKEL 183
+L+ +++
Sbjct: 860 KLALKQQI 867
>gi|421082948|ref|ZP_15543827.1| Protein-P-II uridylyltransferase [Pectobacterium wasabiae CFBP
3304]
gi|401702174|gb|EJS92418.1| Protein-P-II uridylyltransferase [Pectobacterium wasabiae CFBP
3304]
Length = 903
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
N P V+I + T I + S ++ + V L+ NL + A I +S G MD F
Sbjct: 703 NKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 762
Query: 72 NVIDCDGKKI-RDKEVIDYIQQRLETDASF-----------APSLR-----SSVGVMPT- 113
V++ DG + +D+ + I+Q LE + +P LR + V +PT
Sbjct: 763 IVLEPDGSPLAQDRH--EMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTH 820
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 821 TDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALK 879
Query: 173 DPKRLSTIKEL 183
RL + L
Sbjct: 880 PDLRLKLQERL 890
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 32/186 (17%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E +++P V + + + T I + S DRP L + L V + T R
Sbjct: 698 LEHDTNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 757
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 331
A F + DG P++ + E + Q LE ++ RR S L
Sbjct: 758 AMDTFIVLEPDGSPLAQD-RHEMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNF 816
Query: 332 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 817 LPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRR 876
Query: 382 PVDPKI 387
+ P +
Sbjct: 877 ALKPDL 882
>gi|296533888|ref|ZP_06896417.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296265785|gb|EFH11881.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 934
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 31/219 (14%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-N 153
E +AS AP L + V+ T + +D PGLFS + LA +V+A I T N
Sbjct: 721 EAEASGAP-LSVATRVLEARAVTEVTVYCSDHPGLFSRIAGALAVAGATIVDARIHTMTN 779
Query: 154 DRAAAVVHVTDH---STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 210
A V D G A +L+ + L+ L G
Sbjct: 780 GMALDTFWVQDAQPGGAGGAFDASHKLARLSVLIEQALSG-------------------- 819
Query: 211 RRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIV 269
RL+ + ++ +V + R+ +V + N + +TVI + +DRP LL D+
Sbjct: 820 -RLNLV----QEIRKVRREPARLRAVQVPGRVVIDNFASNTHTVIELNGRDRPGLLHDVT 874
Query: 270 CTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 308
+++ + + T A FY++ V GL + ++
Sbjct: 875 AAISEQGLQIASAHITTYGVRAVDVFYVKDVFGLKVEND 913
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+EL DR GLL D+T E L I A I+T G + D FYV DV G V+
Sbjct: 859 IELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFGLKVE 911
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
E A+L P RVVIDN TVI+++ ++ G+L V +++ L I A+I++
Sbjct: 833 EPARLRAVQVPGRVVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTY 892
Query: 64 GGWFMDVFNVIDCDGKKIRD 83
G +DVF V D G K+ +
Sbjct: 893 GVRAVDVFYVKDVFGLKVEN 912
>gi|119505664|ref|ZP_01627734.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2080]
gi|119458476|gb|EAW39581.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2080]
Length = 875
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
LE+ T DR GLL++I +F +++++ A+I T+G +V+D F+VT GN ++
Sbjct: 799 LEVATPDRPGLLANIGAVFVAQNVALQAAKIQTLGERVEDVFFVTTSDGNSIN 851
>gi|451982313|ref|ZP_21930631.1| putative (Protein-PII) uridylyltransferase [Nitrospina gracilis
3/211]
gi|451760478|emb|CCQ91915.1| putative (Protein-PII) uridylyltransferase [Nitrospina gracilis
3/211]
Length = 906
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD------ 384
EL +CT D+ GLL I + N LSI A + T+ V D F V TG+PVD
Sbjct: 712 ELVVCTRDQQGLLYKIAAVLAFNHLSIIEANVHTLDDNVFDIFKVVSATGDPVDFSNFFF 771
Query: 385 --PKIIDSIRR 393
++ID +RR
Sbjct: 772 IQKQVIDDLRR 782
>gi|239908123|ref|YP_002954864.1| protein-PII uridylyltransferase [Desulfovibrio magneticus RS-1]
gi|239797989|dbj|BAH76978.1| putative protein-PII uridylyltransferase [Desulfovibrio magneticus
RS-1]
Length = 884
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 319 EAAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
E AI+ +AS+ +++ +DRVGLL DI R E L A++ T G+V+D FYV
Sbjct: 794 EVAIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVRG 853
Query: 378 VTGNPV-DPKIIDSIRRQIGH 397
G V DP+ + I+ + H
Sbjct: 854 PAGRRVEDPEQLAEIKAALLH 874
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+PP V IDN TVI V ++ G+L + + L ++ L A + + G DVF
Sbjct: 791 SPPEVAIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFY 850
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
V G+++ D E + I+ L
Sbjct: 851 VRGPAGRRVEDPEQLAEIKAAL 872
>gi|289165574|ref|YP_003455712.1| PII uridylyl-transferase [Legionella longbeachae NSW150]
gi|288858747|emb|CBJ12652.1| putative PII uridylyl-transferase [Legionella longbeachae NSW150]
Length = 859
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 282 GMVNTGRTEAYQEF---YIRHVDGLPISSEAERERVIQCLEAAIERR-----ASEGLELE 333
NT R+ QE ++ H D +P+ ++ R + + A+ L
Sbjct: 730 AFFNTQRSIDIQEALSTHLAHSDQMPVVAKRRLSRALAHFNVKTQIHYYDEIANNQTRLF 789
Query: 334 LCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRR 393
L T DR GLL+ I R+F + + A+I T G + +DTFY+T+ + P+ + +R
Sbjct: 790 LVTGDRPGLLATIGRVFSTLKIHLHNAKIVTAGERAEDTFYITNQKNQSLTPEEKEMLRE 849
Query: 394 QI 395
++
Sbjct: 850 KL 851
>gi|149190035|ref|ZP_01868312.1| PII uridylyl-transferase [Vibrio shilonii AK1]
gi|148836065|gb|EDL53025.1| PII uridylyl-transferase [Vibrio shilonii AK1]
Length = 874
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N T + V ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLMSKNATRGGTEVFVYCQDQPALFATVVAELDRRNFNVHDAQIMTSKDGFVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G I R VI ++ LE AP ++++ V +PT+ +
Sbjct: 739 LDQHGDAIDVERHSAVIKHLVHVLEDGRPTRVKTRRAPRNLKHFNVKTQVDFLPTKGKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E D PGL ++V A A L N+ A+I T +RA + +T + G
Sbjct: 799 TLMELVALDAPGLLAKVGATFAQLGVNLHAAKITTIGERAEDLFILTSATGG 850
>gi|87118629|ref|ZP_01074528.1| PII uridylyl-transferase [Marinomonas sp. MED121]
gi|86166263|gb|EAQ67529.1| PII uridylyl-transferase [Marinomonas sp. MED121]
Length = 893
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDS 390
L++ DR GLL+ I + F + + + +A+I+T+G +V+DTFY+T+ +G VDP I
Sbjct: 818 LDVIAPDRPGLLAMIGQFFMKQDVMLHKAKIATLGERVEDTFYITEKSGERIVDPNRIKQ 877
Query: 391 IRRQI 395
+ +Q+
Sbjct: 878 LCQQL 882
>gi|430761259|ref|YP_007217116.1| [Protein-PII] uridylyltransferase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430010883|gb|AGA33635.1| [Protein-PII] uridylyltransferase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 886
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 395
DR GLLS I +F E +++++ A IST G +V+D F + + G + P+ D++RRQ+
Sbjct: 825 DRPGLLSTIGCVFAEQNVNVRTARISTAGEQVEDIFLLFNTDGRELTPEQQDALRRQL 882
>gi|397687902|ref|YP_006525221.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
gi|395809458|gb|AFN78863.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
Length = 900
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR GLL+ I ++F E LS++ A+I+T+G +V+D F+VT+ P+
Sbjct: 817 IEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVTNADNQPL 868
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T+I+V + ++ G+L ++ Q+ + +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+ D + + D ++ +QQ L
Sbjct: 861 TNADNQPLSDLQLCTQLQQAL 881
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 27/212 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQHEFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA--------------------SFAPSLRSSVG 109
+ V+D DG I D E I I+Q L T+A FA + ++
Sbjct: 749 YIVLDADGAPIGNDPERIQEIRQGL-TEALRNPEDYLTIIKRHVPRQLKHFAFPPQVTIH 807
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
T IE DRPGL + + + + +V NA+I T +R V VT+ +
Sbjct: 808 NDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVTN-ADNQ 866
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ D + + +++ L L ++ + + +S+
Sbjct: 867 PLSDLQLCTQLQQALVKQLSQENEHQPSPSSI 898
>gi|313672568|ref|YP_004050679.1| UTP-glnb uridylyltransferase, glnd [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939324|gb|ADR18516.1| UTP-GlnB uridylyltransferase, GlnD [Calditerrivibrio nitroreducens
DSM 19672]
Length = 856
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ ED VGLL I +F + +S+++A+IST +V D+FY+TD GN + D ++ +
Sbjct: 788 VDIYAEDFVGLLYYILSVFEKLRISVQKAKISTDVNRVVDSFYITDEFGNKIEDKSMLQT 847
Query: 391 IRRQI 395
IR +I
Sbjct: 848 IREEI 852
>gi|224056635|ref|XP_002298947.1| predicted protein [Populus trichocarpa]
gi|222846205|gb|EEE83752.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 12/181 (6%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV-FNVIDCD 77
+DN+ T++++ + G+L +++ L D N+ I S + G D+ ++ D
Sbjct: 237 MDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQISYGRFSMNHGRACDIDLFLVQTD 296
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSEVC 134
GKKI D + RLE + P ++V P E +E +G RP +F ++
Sbjct: 297 GKKIVDPRKQKALSSRLEMEL-VRPLRVATVSRGPDTELLVANPVELSGKGRPLVFHDIT 355
Query: 135 AVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVLRGY 191
L L+ + +AEI DR V V D G A+ P+ S I++ ++ +L G+
Sbjct: 356 LALKMLNTCIFSAEIRRRMIGDREFEVYRVLLDEGEGLAV--PR--SKIEKQVWKMLMGW 411
Query: 192 D 192
+
Sbjct: 412 E 412
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 297
E D TVIT+ D+ L D+ + + G V+T Y F++
Sbjct: 18 EGDPTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYLVFWVVGKSTTRWGL 77
Query: 298 ---RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 354
R V+ P S A + R + L+L +DR GLL D+T + E
Sbjct: 78 LKKRLVEACPSCSSASGLSFYR--SELQPPRPPDVFLLKLSCQDRRGLLHDVTSVLCELE 135
Query: 355 LSIKRAEISTI-GGKVKDTFYVTD 377
L+IK+ ++ST G+V D F++TD
Sbjct: 136 LTIKKVKVSTTPDGRVIDLFFITD 159
>gi|253687335|ref|YP_003016525.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259492002|sp|C6DAI1.1|GLND_PECCP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|251753913|gb|ACT11989.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 904
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 703 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 762
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + E+I + ++ T + +P LR + V +PT
Sbjct: 763 FIVLEPDGSPLAQDRHEMIRHALEQALTQRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 822
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 881
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 882 ELRLKLQERL 891
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 31/166 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 310
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 719 TEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLAQD-R 777
Query: 311 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 341
E + LE A+ RR S L +EL D+ G
Sbjct: 778 HEMIRHALEQALTQRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTDRRSYMELSALDQPG 837
Query: 342 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
LL+ I IF + +LS+ A ISTIG +V+D F + D + P++
Sbjct: 838 LLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRRALKPEL 883
>gi|68250319|ref|YP_249431.1| PII uridylyl-transferase [Haemophilus influenzae 86-028NP]
gi|81170617|sp|Q4QJM6.1|GLND_HAEI8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68058518|gb|AAX88771.1| [protein-PII] uridylyltransferase [Haemophilus influenzae 86-028NP]
Length = 863
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 322 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
++ E ++EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 382 PVDPKIIDSIR----RQIG 396
+D + + +R R IG
Sbjct: 845 ALDSQQREILRNVLYRNIG 863
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ ++P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTLALQSEKLPALSIVPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLQENKKEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|325578503|ref|ZP_08148603.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
gi|325159739|gb|EGC71869.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
Length = 861
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 33/196 (16%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N + T I V ++ + +V+ + I A I +SD G+ D F + +
Sbjct: 675 VKISNRFSSGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDSFIITE 734
Query: 76 CDGKKIRDKEVIDYIQQRLET------------DASFAPSLRSSVGVMPTE--------- 114
+G+ +R + ++ LET SFA + + + T+
Sbjct: 735 LNGELVRSER-----RRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKK 789
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+ +
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTN-EKGIALTEE 848
Query: 175 KRLSTIKELLFNVLRG 190
+R LL NVL G
Sbjct: 849 ER-----GLLENVLYG 859
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
E ELE+ D+ GLL+ I++IF E L+I A+I+T+G K +D F +T+ G
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKG 842
>gi|419839139|ref|ZP_14362557.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
gi|386909850|gb|EIJ74514.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
Length = 863
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + +
Sbjct: 720 ITAQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|317051031|ref|YP_004112147.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
gi|316946115|gb|ADU65591.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
Length = 897
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ T D+ GLL D+TR+ L+I A I+T +V D FYV+D+ GN V + I+
Sbjct: 829 VEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVDVFYVSDLKGNKVLSEERIEG 888
Query: 391 IRRQIG 396
I+ Q+G
Sbjct: 889 IKEQVG 894
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
RV + N+ TV++V + +K G+L + ++L + L I A I+++ +DVF V D
Sbjct: 815 RVFVHNDQSEKYTVVEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVDVFYVSD 874
Query: 76 CDGKKIRDKEVIDYIQQRL 94
G K+ +E I+ I++++
Sbjct: 875 LKGNKVLSEERIEGIKEQV 893
>gi|168031081|ref|XP_001768050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680688|gb|EDQ67122.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 41/217 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDVFNV 73
P V+ID + A+AT++++ ++ G LL I+ L D+ L + + ++++G F V
Sbjct: 7 PIVLIDQESDAEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGPNLRRKKFLV 66
Query: 74 IDCD-GKKIRDKEVIDYIQ---------------QRLETDASFAPS---------LRSSV 108
D KK+ D E+++ I+ ++L +F + + + V
Sbjct: 67 TRLDNNKKVEDPELLEAIRLTIINNLLQYHPESGEQLAMGVAFGENPPKKEIDVDVATHV 126
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND------RAAAVVHV 162
V + + DRPGL E+ V+ D+ V +AEI T D A +V
Sbjct: 127 TVTREGSRSLLSVETADRPGLLLEILKVICDISIYVESAEIDTEADFLHFGLVAKDKFYV 186
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
T H + +++E+L N LR Y R+ +T
Sbjct: 187 TYHGEVLS-------KSMEEVLTNALRYY--LRRPET 214
>gi|374620392|ref|ZP_09692926.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
gi|374303619|gb|EHQ57803.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
Length = 869
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 35/196 (17%)
Query: 235 DKSSRPQVTVL----NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
D SS P V + ++ + T I + + D + + L + + + +G
Sbjct: 664 DGSSEPLVLIKQSSESLIANATQIFVHTHDTENVFSKVCSALELLDLSINDARIYSGTDG 723
Query: 291 AYQE-FYIRHVDGLPISSEAERERVIQ--CLEAAIERRASEGLE---------------- 331
A + F++ DG PI S E +I+ +EA S+G +
Sbjct: 724 ATLDTFFVLKADGSPIDSAPETLTLIERSIVEALSASSVSQGNQRMNRTLRSFLSPTEVT 783
Query: 332 -----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
+EL + DR GLL+ + +I +N +SI+ A+I T+G +V+D F++T G
Sbjct: 784 FIEDQNRNLTIMELSSPDRPGLLARVGQIMADNQISIQGAKIQTLGERVEDVFFLTTDQG 843
Query: 381 NPV-DPKIIDSIRRQI 395
+ + D I + +R Q+
Sbjct: 844 DRLADDTICERLREQV 859
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 22/171 (12%)
Query: 15 PRVVIDNNT---CADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
P V+I ++ A+AT I V + + + +V L ++L I A I S G +D
Sbjct: 669 PLVLIKQSSESLIANATQIFVHTHDTENVFSKVCSALELLDLSINDARIYSGTDGATLDT 728
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---------PTE------- 114
F V+ DG I + +R +A A S+ M PTE
Sbjct: 729 FFVLKADGSPIDSAPETLTLIERSIVEALSASSVSQGNQRMNRTLRSFLSPTEVTFIEDQ 788
Query: 115 --EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T +E + DRPGL + V ++AD ++ A+I T +R V +T
Sbjct: 789 NRNLTIMELSSPDRPGLLARVGQIMADNQISIQGAKIQTLGERVEDVFFLT 839
>gi|451947389|ref|YP_007467984.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
gi|451906737|gb|AGF78331.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
Length = 855
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH--VTDHSTGYAIKDPKRLSTIKE 182
DR GL +++C VL + +V+NA+I+T D +A + + + Y KD + ++
Sbjct: 674 DRRGLLAKICGVLGLHNLSVLNAQIFTWKDGSAVDILDVLPEDGVEYEEKDWQAINDDLN 733
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 242
L N H++ R Y+++ +GR + + ++
Sbjct: 734 LALN---------------------------HRLGLGHRLYKKLSSGIGRAKRSTGTNEI 766
Query: 243 TVLNIEK---DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 297
V+ K +YTV+ + S D P L+ I TL D ++ + T + FY+
Sbjct: 767 RVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFYV 824
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N RVV+DN + TV++V S + G L ++ Q L D + I +A+I+++ +DVF
Sbjct: 764 NEIRVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFY 823
Query: 73 VIDCDGKKI 81
V+D +KI
Sbjct: 824 VLDSQQEKI 832
>gi|417844045|ref|ZP_12490108.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
gi|341947997|gb|EGT74636.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
Length = 863
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S AP+ + +
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSIAPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|359483492|ref|XP_002273615.2| PREDICTED: glycogen phosphorylase 1-like [Vitis vinifera]
Length = 981
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +D D+T + + NK G+L + +V + L I KA + +G +F F V
Sbjct: 65 PTVTVDAAVSTDSTSFVIRARNKIGLLQVITRVFKVLGLHIDKATVEFEGDFFTQKFFVT 124
Query: 75 DCDGKKIRDKEVIDYIQQRL----------ETDASFAPSLRSSV----GVMPTEEHTSIE 120
D G+KI D+E +D I + L T+ S PS R V G+ P + +
Sbjct: 125 DSHGRKIEDQENLDRITKALLEAIDGGGGWGTETSVGPSTRGIVVRRAGLGPKPQAERM- 183
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
F DR L ++ ++ D+ + + H+ R + D + KDPKRL
Sbjct: 184 FALMDR-FLSNDPVSLQKDILDHAL-----AHSVRDRLIERWHDTQQYFKRKDPKRL 234
>gi|417844793|ref|ZP_12490832.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
gi|341956273|gb|EGT82703.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
Length = 863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ +MP
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTLALQSEKLPALSIMPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++A
Sbjct: 773 LQHFIVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|114321016|ref|YP_742699.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227410|gb|ABI57209.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
Length = 894
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P V++ T + + + + + + + L+ + L I+ A I++D G+ +D + V
Sbjct: 693 PIVLVKQRGPRGGTELFIYARDNRYVFARTVSTLDRLGLNIQDARIITTDQGYTLDSYLV 752
Query: 74 IDCDGKKIRDKEVIDYIQQRLET---DASFAPSL-------RSSVGVMPTE--------- 114
++ +G+ + D+ + +RL T DA P L R PT+
Sbjct: 753 LEDNGEPVTDEGRCREMVERLRTSLADAHRPPDLAEHRLPRRLKHFSTPTQINFSTDGPN 812
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E DRPGL ++V + + NA+I T +RA V +TD + DP
Sbjct: 813 QRTVLELITGDRPGLLAQVGQAFSQCRVKLKNAKIATIGERAEDVFFITD-DQDEPLADP 871
Query: 175 KRLSTIKELLFNVL 188
+ ++++L + L
Sbjct: 872 VQFRCLRDVLSDCL 885
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP 385
LEL T DR GLL+ + + F + + +K A+I+TIG + +D F++TD P+ DP
Sbjct: 817 LELITGDRPGLLAQVGQAFSQCRVKLKNAKIATIGERAEDVFFITDDQDEPLADP 871
>gi|374854463|dbj|BAL57344.1| protein-P-II uridylyltransferase [uncultured gamma proteobacterium]
Length = 859
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
LEL DR GLL+ + +F L + A I+T+G + +D F++TD G P+
Sbjct: 790 LELIAADRPGLLARVGEVFERFRLRLHEARIATLGNRAEDIFFLTDCQGQPL 841
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ + + V ++ I Q +L + L + A + ++ G+ ++ F V
Sbjct: 666 PLVLLRPQNRRGSAEVFVYMRDRDAIFAQTAALLEQLGLTVLAARLETTQDGYVVNSFLV 725
Query: 74 IDCDGKKI----RDKEVIDYIQQRLE--TDASFA----PSLRSSVGVMPTEEH------- 116
++ DG+ I R +++ +Q+ L+ + FA P+ R +PT+ H
Sbjct: 726 LERDGQPILDLSRQYQIVTRLQRCLKDPRPSCFAIERRPNRRLRHFSIPTQVHFYPDAKH 785
Query: 117 --TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E DRPGL + V V + A I T +RA + +TD
Sbjct: 786 GRTMLELIAADRPGLLARVGEVFERFRLRLHEARIATLGNRAEDIFFLTD 835
>gi|417839977|ref|ZP_12486136.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
gi|341951103|gb|EGT77683.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
Length = 863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S AP+ + +
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIAPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|342904961|ref|ZP_08726756.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21621]
gi|341952197|gb|EGT78733.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21621]
Length = 863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G KV+D F + + G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKVEDFFILANQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++ + + G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKVEDFF-ILANQFGQALDS 848
Query: 174 PKRLSTIKELLFNVL 188
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|308185738|ref|YP_003929869.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
gi|308056248|gb|ADO08420.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
Length = 884
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 390 SIRRQI 395
++++++
Sbjct: 869 ALQQRL 874
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + + P S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSDWVPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|224109552|ref|XP_002315234.1| predicted protein [Populus trichocarpa]
gi|222864274|gb|EEF01405.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74
V +DN T++++ V++ G+ ++++ D+N+ + SS G MD+F V
Sbjct: 243 VTVDNLLSPAHTLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSSIKGYRNMDLF-VQ 301
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D +++D + RL+ + P P E +E G RP +F
Sbjct: 302 QTDGKKILDPKLLDNLCSRLKEEM-LHPLRVIITNRGPDTELLVANPVELCGKGRPRVFY 360
Query: 132 EVCAVLADLHCNVVNAEIWTHN 153
+V L L + +AEI H+
Sbjct: 361 DVTLALKKLGICIFSAEIGRHS 382
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 156/390 (40%), Gaps = 63/390 (16%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI-- 74
++ N+ D T++ V+ +K G+ + +++ + L I +A +DG W V V+
Sbjct: 10 LIQQGNSPHDPTIVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVLWVVQL 69
Query: 75 --------DCDGKKIRDKEVID------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
D D K R V Y Q+L +S APS+ ++
Sbjct: 70 QHSNLLRLDWDSLKNRLLRVSPPCLTPLYYDQKL-NGSSAAPSV------------YLLK 116
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLST 179
F DR GL +V VL +L + ++ T D + + +TD K KR
Sbjct: 117 FCCVDRKGLLHDVTEVLTELEFTIQRLKVMTTPDGKVVDLFFITDGRELLHTK--KRRDD 174
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQI-------MFDDRDYERVEKAVGR 232
L++V R Y + L+ P + +R L + +F E+ E +
Sbjct: 175 TCRYLYDVFREY--CIGCELQLAGPEC-DTQRNLSSLPLVVAEELFSCELSEK-ESCMQA 230
Query: 233 VEDKSSRPQVTVLNIEK----DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 288
+ ++ P+ ++ ++ +T++ ++ D+ L +DI+ D+ V +G ++
Sbjct: 231 LRTATTSPKKAIVTVDNLLSPAHTLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSS- 289
Query: 289 TEAYQ--EFYIRHVDGLPI--------SSEAERERVIQCLEAAIERRASEGLEL-----E 333
+ Y+ + +++ DG I +E ++ L I R + L E
Sbjct: 290 IKGYRNMDLFVQQTDGKKILDPKLLDNLCSRLKEEMLHPLRVIITNRGPDTELLVANPVE 349
Query: 334 LCTEDRVGLLSDITRIFRENSLSIKRAEIS 363
LC + R + D+T ++ + I AEI
Sbjct: 350 LCGKGRPRVFYDVTLALKKLGICIFSAEIG 379
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 246 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---RHVDG 302
N D T++T+ D+ L D+ + + + T Y ++ +H +
Sbjct: 15 NSPHDPTIVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVLWVVQLQHSNL 74
Query: 303 LPISSEAERERVIQ----CLEAAIERRASEGLE-------LELCTEDRVGLLSDITRIFR 351
L + ++ + R+++ CL + G L+ C DR GLL D+T +
Sbjct: 75 LRLDWDSLKNRLLRVSPPCLTPLYYDQKLNGSSAAPSVYLLKFCCVDRKGLLHDVTEVLT 134
Query: 352 ENSLSIKRAEI-STIGGKVKDTFYVTD 377
E +I+R ++ +T GKV D F++TD
Sbjct: 135 ELEFTIQRLKVMTTPDGKVVDLFFITD 161
>gi|381405610|ref|ZP_09930294.1| PII uridylyl-transferase [Pantoea sp. Sc1]
gi|380738809|gb|EIB99872.1| PII uridylyl-transferase [Pantoea sp. Sc1]
Length = 884
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSQWVPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 390 SIRRQI 395
++++++
Sbjct: 869 ALQQRL 874
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + + P S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSQWVPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|407070690|ref|ZP_11101528.1| PII uridylyl-transferase [Vibrio cyclitrophicus ZF14]
Length = 873
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 26/184 (14%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L+ N + A + S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPS---------------LRS 106
G +D F V+D GK I R K V ++ L A P+ +++
Sbjct: 730 GHVLDTFIVLDQHGKAIDEARHKAVAKHLVHVL---ADGRPTKIKTRRTPRNLQHFKVKT 786
Query: 107 SVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
V +PT+ +HT +E D PGL +EV A A+L N+ A+I T +RA + +T
Sbjct: 787 LVEFLPTKSKKHTLMELRALDTPGLLAEVGATFAELDINLHGAKITTIGERAEDLFILTS 846
Query: 165 HSTG 168
+ G
Sbjct: 847 DAGG 850
>gi|145633652|ref|ZP_01789379.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229845252|ref|ZP_04465385.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
gi|144985529|gb|EDJ92345.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229811847|gb|EEP47543.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
Length = 863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSKKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|319896795|ref|YP_004134989.1| uridylyltransferase [Haemophilus influenzae F3031]
gi|317432298|emb|CBY80651.1| uridylyltransferase [Haemophilus influenzae F3031]
Length = 863
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + ++
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFIVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|261211379|ref|ZP_05925667.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
gi|260839334|gb|EEX65960.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
Length = 876
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 18/183 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTLKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E D PGL + V A A+L+ ++ A+I T +RA + +T+ +D
Sbjct: 797 KRTLMELVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNSQGARLNEDE 856
Query: 175 KRL 177
++L
Sbjct: 857 EQL 859
>gi|224100951|ref|XP_002312081.1| predicted protein [Populus trichocarpa]
gi|222851901|gb|EEE89448.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 148/372 (39%), Gaps = 47/372 (12%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE 85
D TV+ V+ +K G+ + +++ + L I +A +DG W VF V+ D
Sbjct: 19 DPTVVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVFWVVQRSNSLRLD-- 76
Query: 86 VIDYIQQRL--ETDASFAPSLRSSV--GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
D ++ RL + AP G ++F DR GL ++ VL +L
Sbjct: 77 -WDSLKNRLLIVSPPCLAPLYYDHKLNGSTAAPSVYLLKFCCVDRKGLLHDITEVLTELE 135
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY--DDFRK--- 196
+ ++ T D + + I D + L KE N GY D F++
Sbjct: 136 FTIQRLKVMTTPDEKVVDL--------FFITDGRELLHTKERRDNTC-GYLCDVFKEYCI 186
Query: 197 -AKTSLSPPGIMNRE------RRLHQIMF--DDRDYERVEKAVGRVEDKSSRPQVTVLN- 246
+ L+ P N+ + + +F + + E +A+G + VTV N
Sbjct: 187 SCELQLAGPECENQRTFSSLPMAVAEELFSCELSEKESCTQALGTATTPPKKAIVTVDNL 246
Query: 247 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ--EFYIRHVDG-- 302
+ +T++ ++ D+ L +DI+ T D+ V +G ++ + Y + IR DG
Sbjct: 247 LSPAHTLLQIQCVDQKGLFYDILRTSKDLNIQVAYGRFSSS-IKGYHNMDLLIRQTDGKK 305
Query: 303 ------LPISSEAERERVIQCLEAAIERRASEGLEL-----ELCTEDRVGLLSDITRIFR 351
L + +E ++ L I R + L ELC + R + D+T +
Sbjct: 306 IVDPELLANTCSRLKEEMLHPLRVIITNRGPDTELLVANPVELCGKGRPRVFYDVTLTLK 365
Query: 352 ENSLSIKRAEIS 363
+ + I AEI
Sbjct: 366 KLGICIFSAEIG 377
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 14 PPR---VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFM 68
PP+ V +DN T++++ V++ G+ +++ D+N+ + SS G M
Sbjct: 235 PPKKAIVTVDNLLSPAHTLLQIQCVDQKGLFYDILRTSKDLNIQVAYGRFSSSIKGYHNM 294
Query: 69 DVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTD 125
D+ + DGKKI D E++ RL+ + P P E +E G
Sbjct: 295 DLL-IRQTDGKKIVDPELLANTCSRLKEEM-LHPLRVIITNRGPDTELLVANPVELCGKG 352
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHN 153
RP +F +V L L + +AEI H+
Sbjct: 353 RPRVFYDVTLTLKKLGICIFSAEIGRHS 380
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEI-STIGGKVKDTFYVTD 377
L+ C DR GLL DIT + E +I+R ++ +T KV D F++TD
Sbjct: 113 LKFCCVDRKGLLHDITEVLTELEFTIQRLKVMTTPDEKVVDLFFITD 159
>gi|398795140|ref|ZP_10555055.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
gi|398206971|gb|EJM93727.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
Length = 884
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 686 LNKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + + P R + V +PT
Sbjct: 746 FIVLEPDGSPLAADRHPLIIQALEQAITQNEWVPPRTRRQSARLKHFSVDTEVNFLPTHT 805
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + +E D+PGL + V V ADL ++ A I T +R + + D
Sbjct: 806 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAD 856
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 36/168 (21%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P++++ +IQ LE AI RR S L+
Sbjct: 750 EPDGSPLAAD-RHPLIIQALEQAITQNEWVPPRTRRQSARLKHFSVDTEVNFLPTHTDRR 808
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + D
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAD 856
>gi|386265651|ref|YP_005829143.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
gi|309972887|gb|ADO96088.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
Length = 863
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + ++
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFIVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|409393661|ref|ZP_11244961.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409393804|ref|ZP_11245087.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121642|gb|EKM97708.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121803|gb|EKM97865.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
Length = 900
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 387
+E+ DR GLL+ + ++F LS++ A+I+T+G +V+D F+VT+ P+ DP++
Sbjct: 817 IEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTNADNQPLSDPQL 873
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 13 NPPRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-M 68
N P V+I T + T I + + ++H + ++ +NL I A I + F +
Sbjct: 687 NGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTL 746
Query: 69 DVFNVIDCDGKKIRD-KEVIDYIQQRLETDA--------------------SFAPSLRSS 107
D + V+D DG I D +E I+ I+Q L DA FA + +
Sbjct: 747 DTYIVLDADGTPIGDNRERIEEIRQGL-IDAVRNPDEYLTIIQRHVPRQLKHFAFPPQVT 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T IE DRPGL + V + +V NA+I T +R V VT+ +
Sbjct: 806 IHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTN-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPQ 872
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R PP+V I N+T T+I++ + ++ G+L +V Q+ +L
Sbjct: 781 DEYLTIIQRHVPRQLKHFAFPPQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEV 86
++ A I++ G DVF V + D + + D ++
Sbjct: 841 SVQNAKIATLGERVEDVFFVTNADNQPLSDPQL 873
>gi|288941756|ref|YP_003443996.1| UTP-GlnB uridylyltransferase, GlnD [Allochromatium vinosum DSM 180]
gi|288897128|gb|ADC62964.1| UTP-GlnB uridylyltransferase, GlnD [Allochromatium vinosum DSM 180]
Length = 885
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 390
+ L T DR GLL+++ +F + + ++ A+I+T+G +V D F++T P+ + +
Sbjct: 811 MRLTTLDRPGLLAEVGAVFEQCGIRLQNAKIATVGAEVDDVFFITTAEETPITCEQALSC 870
Query: 391 IRRQIGHTKLQVK 403
+RR+I H +L+ +
Sbjct: 871 LRREI-HDRLEAR 882
>gi|227326535|ref|ZP_03830559.1| PII uridylyl-transferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 904
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 703 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 762
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + E+I + ++ T + +P LR + V +PT
Sbjct: 763 FIVLEPDGSPLAQDRHEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 822
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 881
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 882 DLRLKLQERL 891
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 31/166 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 310
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 719 TEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLAQD-R 777
Query: 311 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 341
E + LE A+ RR S L +EL D+ G
Sbjct: 778 HEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTDRRSYMELSALDQPG 837
Query: 342 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
LL+ I IF + +LS+ A ISTIG +V+D F + D + P +
Sbjct: 838 LLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRRALKPDL 883
>gi|398830549|ref|ZP_10588735.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
gi|398213986|gb|EJN00570.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
Length = 937
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ V++D++L I A++++ G +DVF V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G +I + I+++L
Sbjct: 894 DLVGHQITNTTRQSRIRKKL 913
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F + R + + + T IE G DRPG+ SE+ V++DL ++ +A + T ++
Sbjct: 829 AFKITPRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +VTD G+ I + R S I++ L +
Sbjct: 889 VFYVTD-LVGHQITNTTRQSRIRKKLLALF 917
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR G+LS+IT + + SL I A ++T G KV D FYVTD+ G+ +
Sbjct: 855 DRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVTDLVGHQI 900
>gi|145639126|ref|ZP_01794733.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|145271688|gb|EDK11598.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|309750707|gb|ADO80691.1| PII uridylyl-transferase [Haemophilus influenzae R2866]
Length = 863
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|452751845|ref|ZP_21951590.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
gi|451961064|gb|EMD83475.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
Length = 908
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV++ N TVI+V++ ++ G+L +++ L D + I A+I++ G +D F +
Sbjct: 815 PRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMT 874
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+K+ + + ++ RL
Sbjct: 875 DLTGQKLDGSQRLKGLETRL 894
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+E+ DR GLL + R + ++I A I+T G + DTFY+TD+TG +D
Sbjct: 830 IEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTDLTGQKLD 882
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 72 NVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP--TEEHTSIEFTGTDRPGL 129
++ D K+R +E + Q+ L + A +++ V V P + T IE DRPGL
Sbjct: 783 SIADVLAGKVRLRE--ELAQRPLPQRRADAFAVQPRVLVQPNASNRFTVIEVNAADRPGL 840
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ L D + +A I T+ +RA ++TD TG + +RL ++ L N ++
Sbjct: 841 LYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTD-LTGQKLDGSQRLKGLETRLLNAVK 899
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 28/188 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYAIKDPK 175
T + D PGL + ++ N+++A I T D A + + H G D
Sbjct: 717 TQVRTYSEDHPGLLMRLAGAISLCGANIIDARIHTTRDGMALNNIGIQGHG-GQPFGDAH 775
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
+L +K + +VL G R+ P +R R +
Sbjct: 776 QLDRLKRSIADVLAGKVRLREELAQRPLP-----QR--------------------RADA 810
Query: 236 KSSRPQVTVL-NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
+ +P+V V N +TVI + + DRP LL+ ++ TL D + + + T A
Sbjct: 811 FAVQPRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDT 870
Query: 295 FYIRHVDG 302
FY+ + G
Sbjct: 871 FYMTDLTG 878
>gi|304396642|ref|ZP_07378523.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
gi|304356151|gb|EFM20517.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
Length = 884
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 390 SIRRQI 395
++++++
Sbjct: 869 ALQQRL 874
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + + P S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSDWVPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|145629183|ref|ZP_01784982.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
gi|144978686|gb|EDJ88409.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
Length = 863
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|431930140|ref|YP_007243186.1| (protein-PII) uridylyltransferase [Thioflavicoccus mobilis 8321]
gi|431828443|gb|AGA89556.1| (protein-PII) uridylyltransferase [Thioflavicoccus mobilis 8321]
Length = 874
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 31/208 (14%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I DR GLF+ A+L L N+++A I T++D + G ++D R
Sbjct: 690 TEIFIYTRDRQGLFARTTAMLDQLGLNIMDARILTNDDGMTLNSYQVLDQGGTQVEDETR 749
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L+ I+ L +VL +D SL M R+ + Y +E V D+
Sbjct: 750 LAEIQGALVSVLAEHD------PSLEVARRMPRQYK----------YFPIETKVTFTTDE 793
Query: 237 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 296
++R TV+ + + DRP LL + + + + T E F+
Sbjct: 794 TNR-----------RTVMRLTTLDRPGLLAAVGSVFETCGIRLSNAKIATIGAEVDDVFF 842
Query: 297 IRHVDGLPISSEAERERVIQCLEAAIER 324
I +G PI+ EA+ + CL+ I R
Sbjct: 843 ITSPEGRPITCEAD----LNCLQEEIHR 866
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+ L T DR GLL+ + +F + + A+I+TIG +V D F++T G P+
Sbjct: 800 MRLTTLDRPGLLAAVGSVFETCGIRLSNAKIATIGAEVDDVFFITSPEGRPI 851
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 7 KLIRRMNP---PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+LI +P P V I T T I + + ++ G+ + +L+ + L I A I ++
Sbjct: 666 RLILAADPQDLPIVRIRPQTARGGTEIFIYTRDRQGLFARTTAMLDQLGLNIMDARILTN 725
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAPSLRSSVGVMP--------- 112
D G ++ + V+D G ++ D+ + IQ L A PSL + MP
Sbjct: 726 DDGMTLNSYQVLDQGGTQVEDETRLAEIQGALVSVLAEHDPSLEVARR-MPRQYKYFPIE 784
Query: 113 ---------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
T T + T DRPGL + V +V + NA+I T
Sbjct: 785 TKVTFTTDETNRRTVMRLTTLDRPGLLAAVGSVFETCGIRLSNAKIAT 832
>gi|149185003|ref|ZP_01863320.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
gi|148831114|gb|EDL49548.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
Length = 919
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 39/186 (20%)
Query: 237 SSRPQVTVLNIEKDY------TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 290
S+R + L++ +Y T++T+ + D P L + I + + ++T RT
Sbjct: 706 SAREKGHELSVHCEYYEARGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTSRTG 765
Query: 291 -AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA---------------SEGLE--- 331
A F ++ G P E + ER+ + + A+ R S+ +
Sbjct: 766 WALDNFLVQDPHGAPFREEQQLERLKKSIADALANRIDLTPKLAQRPLPHSRSKAFDVSP 825
Query: 332 --------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
+E+ DR LL+ + R+ E+ L + A I+ G + DTFYVTD
Sbjct: 826 RVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVTD 885
Query: 378 VTGNPV 383
+TG +
Sbjct: 886 LTGGKL 891
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN TVI+V++ ++ +L ++ +VL + LV+ A+I+ G +D F V
Sbjct: 825 PRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVT 884
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G K+ E D ++ RL
Sbjct: 885 DLTGGKLAGGERQDRLEARL 904
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRD-- 83
AT++ V + + G+ ++ ++ I A I +S GW +D F V D G R+
Sbjct: 726 ATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTSRTGWALDNFLVQDPHGAPFREEQ 785
Query: 84 ------KEVIDYIQQRLETDASFA----PSLRS-SVGVMP--------TEEHTSIEFTGT 124
K + D + R++ A P RS + V P + T IE
Sbjct: 786 QLERLKKSIADALANRIDLTPKLAQRPLPHSRSKAFDVSPRVLFDNKASNRFTVIEVNAR 845
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRP L + + VL + V +A I + +RA +VTD + G
Sbjct: 846 DRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVTDLTGG 889
>gi|344339494|ref|ZP_08770423.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
gi|343800798|gb|EGV18743.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
Length = 886
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 33/182 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHG-MVNTGRTEAYQEFYIRHVDGLPISSEAE 310
T I + + DR L I L + + ++ T A + + DG PI
Sbjct: 701 TEIFIYTTDRANLFGRITALLDQVGLNIMDARILTTEGGMAVNTYQVLDQDGSPIHDTLR 760
Query: 311 RERVIQCLEAAIERRASEGLE------------------------------LELCTEDRV 340
E + CL A + A E ++ + L T DR
Sbjct: 761 MEEIRSCLVADLAEDAGEEIQVARSMPRRHRYFPTETRVTFSTDEPNRRTIMRLATLDRP 820
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI-IDSIRRQIGHTK 399
GLL+++ +F+E + ++ A+I+T+G +V D F++T+ P+ + + +RR+I H +
Sbjct: 821 GLLAEVGAVFQECGIRLQNAKIATVGAEVDDVFFITNDDETPITCETALSCLRREI-HDR 879
Query: 400 LQ 401
L+
Sbjct: 880 LE 881
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P VVI T T I + + ++ + ++ +L+ V L I A I +++GG ++ + V
Sbjct: 688 PLVVIRPVTARGGTEIFIYTTDRANLFGRITALLDQVGLNIMDARILTTEGGMAVNTYQV 747
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDAS--------FAPSLRSSVGVMPTE----------- 114
+D DG I D ++ I+ L D + A S+ PTE
Sbjct: 748 LDQDGSPIHDTLRMEEIRSCLVADLAEDAGEEIQVARSMPRRHRYFPTETRVTFSTDEPN 807
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
T + DRPGL +EV AV + + NA+I T
Sbjct: 808 RRTIMRLATLDRPGLLAEVGAVFQECGIRLQNAKIAT 844
>gi|357417896|ref|YP_004930916.1| PII uridylyl-transferase [Pseudoxanthomonas spadix BD-a59]
gi|355335474|gb|AER56875.1| PII uridylyl-transferase [Pseudoxanthomonas spadix BD-a59]
Length = 875
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
LEL DR GLL+ + ++ R L + A I+T G + +D F+++D P+ + D++
Sbjct: 804 LELVAPDRPGLLAQVAQVLRGQRLRVHEARIATFGERAEDVFHLSDEADRPLSGQARDAL 863
Query: 392 R 392
R
Sbjct: 864 R 864
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 59/161 (36%), Gaps = 21/161 (13%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRD 83
A A + V S ++ G+ ++ L+ + I +A + G D F ++ D D
Sbjct: 693 ARAMEVFVHSPDRDGLFAAILATLDRLGFGIHQARVLMGPHGTVFDTFEILPADTYASAD 752
Query: 84 KEVIDYIQQRLETDA------------------SFAPSLRSSVGVMPTEEHTSIEFTGTD 125
+ +R F P R G HT +E D
Sbjct: 753 TATVAETLRRALAGPLDQVRVSQRTVPRQLRHFRFPP--RFEFGTTLDGRHTVLELVAPD 810
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
RPGL ++V VL V A I T +RA V H++D +
Sbjct: 811 RPGLLAQVAQVLRGQRLRVHEARIATFGERAEDVFHLSDEA 851
>gi|381159779|ref|ZP_09869011.1| (protein-PII) uridylyltransferase [Thiorhodovibrio sp. 970]
gi|380877843|gb|EIC19935.1| (protein-PII) uridylyltransferase [Thiorhodovibrio sp. 970]
Length = 890
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+ L T DR GLL+++ +F + ++ A+I+T+G +V D F++T + P+ + + +
Sbjct: 815 MRLVTLDRPGLLAEVGSVFASCDIRLQSAKIATVGAEVDDVFFITTLADEPIRCETVLAC 874
Query: 392 RRQIGHTKLQ 401
RQ H +L+
Sbjct: 875 LRQEIHRRLE 884
>gi|261756034|ref|ZP_05999743.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
gi|261745787|gb|EEY33713.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
Length = 675
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 596 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 641
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 575 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 634
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 635 DLVGHKISNATRQGNIKRKL 654
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 588 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 646
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 647 QGNIKRKLLALL 658
>gi|145635426|ref|ZP_01791127.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
gi|145267300|gb|EDK07303.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
Length = 157
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 14 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSKKLPALSITPNRQ 66
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 67 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 126
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 127 EDFFILTNQF-GQALDSQQR-----EILRNVL 152
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 85 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 144
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 145 REILRNVLYRNIG 157
>gi|262375426|ref|ZP_06068659.1| protein-P-II uridylyltransferase [Acinetobacter lwoffii SH145]
gi|262309680|gb|EEY90810.1| protein-P-II uridylyltransferase [Acinetobacter lwoffii SH145]
Length = 890
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
+E+ T D GLL+ I +F L I A+I+T+G + +D F+VT GNP+ P
Sbjct: 810 VEIATLDHPGLLAKIGGLFMMQGLDIHSAKIATLGERAEDIFFVTKKDGNPMTP 863
>gi|238792757|ref|ZP_04636388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
gi|238727865|gb|EEQ19388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
Length = 880
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ + T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 685 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 744
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ +I + ++ T ++ +P LR + +PT E
Sbjct: 745 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 804
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 805 TYLELIALDQPGLLARVGGIFADLGLSLHSARITTIGERVEDLFVLAD 852
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + + T I + S DRP L +V L V + T R
Sbjct: 678 LEHDSTKPLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 737
Query: 291 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIE---------RRASEGLE--------- 331
A F + DG P++ + R +I LE A+ RR S L
Sbjct: 738 AMDTFIVLEPDGSPLAQD--RHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETN 795
Query: 332 -----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 796 FLPTHNERRTYLELIALDQPGLLARVGGIFADLGLSLHSARITTIGERVEDLFVLAD 852
>gi|261324258|ref|ZP_05963455.1| uridylyltransferase [Brucella neotomae 5K33]
gi|261300238|gb|EEY03735.1| uridylyltransferase [Brucella neotomae 5K33]
Length = 934
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|23501056|ref|NP_697183.1| PII uridylyl-transferase [Brucella suis 1330]
gi|376279844|ref|YP_005153850.1| PII uridylyl-transferase [Brucella suis VBI22]
gi|384223838|ref|YP_005615002.1| PII uridylyl-transferase [Brucella suis 1330]
gi|30173076|sp|Q8G312.1|GLND_BRUSU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|23346922|gb|AAN29098.1| [protein-pII] uridylyltransferase, putative [Brucella suis 1330]
gi|343382018|gb|AEM17510.1| PII uridylyl-transferase [Brucella suis 1330]
gi|358257443|gb|AEU05178.1| PII uridylyl-transferase [Brucella suis VBI22]
Length = 934
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|256368608|ref|YP_003106114.1| PII uridylyl-transferase [Brucella microti CCM 4915]
gi|255998766|gb|ACU47165.1| protein-P-II uridylyl-transferase [Brucella microti CCM 4915]
Length = 934
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|261751472|ref|ZP_05995181.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
gi|261741225|gb|EEY29151.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
Length = 935
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 856 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 901
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 848 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 906
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 907 QGNIKRKLLALL 918
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 835 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 895 DLVGHKISNATRQGNIKRKL 914
>gi|227114685|ref|ZP_03828341.1| PII uridylyl-transferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 937
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 736 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 795
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + E+I + ++ T + +P LR + V +PT
Sbjct: 796 FIVLEPDGSPLAQDRHEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 855
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 856 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 914
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 915 DLRLKLQERL 924
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 31/166 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 310
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 752 TEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLAQD-R 810
Query: 311 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 341
E + LE A+ RR S L +EL D+ G
Sbjct: 811 HEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTDRRSYMELSALDQPG 870
Query: 342 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
LL+ I IF + +LS+ A ISTIG +V+D F + D + P +
Sbjct: 871 LLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRRALKPDL 916
>gi|261316802|ref|ZP_05955999.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340789768|ref|YP_004755232.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
gi|261296025|gb|EEX99521.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340558226|gb|AEK53464.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
Length = 934
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|260885020|ref|ZP_05896634.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297247538|ref|ZP_06931256.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260874548|gb|EEX81617.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297174707|gb|EFH34054.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 934
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|306842568|ref|ZP_07475219.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
gi|306287424|gb|EFM58904.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
Length = 858
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 779 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 824
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 771 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 829
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 830 QGNIKRKLLALL 841
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 758 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 817
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 818 DLVGHKISNATRQGNIKRKL 837
>gi|260772220|ref|ZP_05881136.1| [Protein-PII] uridylyltransferase [Vibrio metschnikovii CIP 69.14]
gi|260611359|gb|EEX36562.1| [Protein-PII] uridylyltransferase [Vibrio metschnikovii CIP 69.14]
Length = 881
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQ--------RLETD------ASFAPSLRSSVGVMPTE-- 114
+D +G+ I R +I ++ RL+T F ++R+ V +PT+
Sbjct: 739 LDHNGQAIEENRHHALIKHLTHVLTDGRPTRLKTRRIPRNLQHF--TVRTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ T +E D PGL + + A A+L+ ++ A+I T +RA
Sbjct: 797 KRTLMELVALDTPGLLATIGATFAELNLDLHGAKITTLGERA 838
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+EL D GLL+ I F E +L + A+I+T+G + +D F +T+ G + + +++
Sbjct: 801 MELVALDTPGLLATIGATFAELNLDLHGAKITTLGERAEDLFILTNQQGAKLTDQEQNAL 860
Query: 392 RRQIGHTKLQVKRSTILAPKP 412
R ++ T Q+ S A P
Sbjct: 861 RERLIDTIAQLSSSHQEALSP 881
>gi|265987872|ref|ZP_06100429.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
gi|264660069|gb|EEZ30330.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
Length = 934
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|261218146|ref|ZP_05932427.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261321007|ref|ZP_05960204.1| uridylyltransferase [Brucella ceti M644/93/1]
gi|260923235|gb|EEX89803.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261293697|gb|EEX97193.1| uridylyltransferase [Brucella ceti M644/93/1]
Length = 934
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|225851679|ref|YP_002731912.1| PII uridylyl-transferase [Brucella melitensis ATCC 23457]
gi|256264811|ref|ZP_05467343.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|384210514|ref|YP_005599596.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|384407618|ref|YP_005596239.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|384444233|ref|YP_005602952.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
gi|254798829|sp|C0RGK0.1|GLND_BRUMB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|225640044|gb|ACN99957.1| protein-P-II uridylyltransferase [Brucella melitensis ATCC 23457]
gi|263095221|gb|EEZ18890.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|326408165|gb|ADZ65230.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|326537877|gb|ADZ86092.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|349742229|gb|AEQ07772.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
Length = 934
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|53805193|ref|YP_113084.1| protein-P-II uridylyltransferase [Methylococcus capsulatus str.
Bath]
gi|81170623|sp|Q60BB2.1|GLND_METCA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|53758954|gb|AAU93245.1| protein-P-II uridylyltransferase [Methylococcus capsulatus str.
Bath]
Length = 877
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
LEL DR GLLS + + F + + A+IST+G + +D F++TD P+D
Sbjct: 806 LELIATDRPGLLSKVGQAFMRTGIRLHNAKISTVGSRAEDIFFITDREDRPLD 858
>gi|260567217|ref|ZP_05837687.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
gi|260156735|gb|EEW91815.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
Length = 934
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|148560425|ref|YP_001258178.1| PII uridylyl-transferase [Brucella ovis ATCC 25840]
gi|166226141|sp|A5VN81.1|GLND_BRUO2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148371682|gb|ABQ61661.1| protein-P-II uridylyltransferase [Brucella ovis ATCC 25840]
Length = 934
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|17988087|ref|NP_540721.1| PII uridylyl-transferase [Brucella melitensis bv. 1 str. 16M]
gi|62289122|ref|YP_220915.1| PII uridylyl-transferase [Brucella abortus bv. 1 str. 9-941]
gi|82699061|ref|YP_413635.1| PII uridylyl-transferase [Brucella melitensis biovar Abortus 2308]
gi|189023397|ref|YP_001934165.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225626684|ref|ZP_03784723.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237814613|ref|ZP_04593611.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260546419|ref|ZP_05822159.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260563217|ref|ZP_05833703.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260756000|ref|ZP_05868348.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260759224|ref|ZP_05871572.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760946|ref|ZP_05873289.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|261215276|ref|ZP_05929557.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|261221372|ref|ZP_05935653.1| uridylyltransferase [Brucella ceti B1/94]
gi|261314640|ref|ZP_05953837.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261759259|ref|ZP_06002968.1| uridylyltransferase [Brucella sp. F5/99]
gi|265992346|ref|ZP_06104903.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994089|ref|ZP_06106646.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265997332|ref|ZP_06109889.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|376271945|ref|YP_005150523.1| uridylyltransferase [Brucella abortus A13334]
gi|423167714|ref|ZP_17154417.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|423169910|ref|ZP_17156585.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|423175099|ref|ZP_17161768.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|423178050|ref|ZP_17164695.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|423179343|ref|ZP_17165984.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|423182473|ref|ZP_17169110.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|423186584|ref|ZP_17173198.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
gi|423190978|ref|ZP_17177586.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|22256763|sp|Q8YES3.1|GLND_BRUME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|75497477|sp|Q57FN0.1|GLND_BRUAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91206741|sp|Q2YNZ1.1|GLND_BRUA2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238689407|sp|B2S8D8.1|GLND_BRUA1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|17983838|gb|AAL52985.1| [protein-pii] uridylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|62195254|gb|AAX73554.1| [protein-pII] uridylyltransferase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615162|emb|CAJ10099.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:Metal-dependent phosphohydrolase, HD region
[Brucella melitensis biovar Abortus 2308]
gi|189018969|gb|ACD71691.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225618341|gb|EEH15384.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237789450|gb|EEP63660.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260096526|gb|EEW80402.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260153233|gb|EEW88325.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260669542|gb|EEX56482.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260671378|gb|EEX58199.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676108|gb|EEX62929.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260916883|gb|EEX83744.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|260919956|gb|EEX86609.1| uridylyltransferase [Brucella ceti B1/94]
gi|261303666|gb|EEY07163.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261739243|gb|EEY27239.1| uridylyltransferase [Brucella sp. F5/99]
gi|262551800|gb|EEZ07790.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|262765070|gb|EEZ10991.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|263003412|gb|EEZ15705.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|363399551|gb|AEW16521.1| uridylyltransferase [Brucella abortus A13334]
gi|374537330|gb|EHR08843.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|374541148|gb|EHR12647.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|374542146|gb|EHR13635.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|374547534|gb|EHR18988.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|374550862|gb|EHR22297.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|374551319|gb|EHR22753.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|374553668|gb|EHR25082.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|374558263|gb|EHR29657.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
Length = 934
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|306844413|ref|ZP_07477003.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
gi|306275226|gb|EFM56976.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
Length = 934
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|242280894|ref|YP_002993023.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
gi|242123788|gb|ACS81484.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
Length = 845
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AK + P R+ +DN++ A+ T+I+V + ++ GIL ++ +N+ ++ A IS+ G
Sbjct: 749 AKSVPSRVPTRISVDNDSSAECTLIEVITQDRSGILYDMVASFARMNINLRMARISTTGE 808
Query: 66 WFMDVFNVIDCDGKKIRD----KEVIDYIQQRL 94
DVF+V +G +I D +E+I ++ L
Sbjct: 809 SVFDVFHVEGPEGGRIEDHIHLRELISALEYSL 841
>gi|161618133|ref|YP_001592020.1| PII uridylyl-transferase [Brucella canis ATCC 23365]
gi|376275082|ref|YP_005115521.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
gi|161334944|gb|ABX61249.1| protein-P-II uridylyltransferase [Brucella canis ATCC 23365]
gi|363403649|gb|AEW13944.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
Length = 934
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|167643982|ref|YP_001681645.1| PII uridylyl-transferase [Caulobacter sp. K31]
gi|167346412|gb|ABZ69147.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter sp. K31]
Length = 941
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 33/163 (20%)
Query: 254 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAER- 311
I + +KDR L D+ ++ + V V T R +A F+++ V G + E R
Sbjct: 739 IVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQDVTGAALGCENPRV 798
Query: 312 -ERVIQCLEAA-------IERR-----------------------ASEGLELELCTEDRV 340
R+ LEAA IE R ++E +E DR
Sbjct: 799 LRRLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTVVIDNEASNEATVVEASGRDRP 858
Query: 341 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
GLL + R +N LSI+ A I G + D FYV G V
Sbjct: 859 GLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQTSEGGKV 901
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVIDN +ATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 835 PTVVIDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ 894
Query: 75 DCDGKKIRDKEVI 87
+G K+ D + +
Sbjct: 895 TSEGGKVADAKKV 907
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDGKKI- 81
A+A I + + ++ G+ + ++ + N+V + + S G +DVF+V D G +
Sbjct: 734 ANAAEIVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQG-QALDVFHVQDVTGAALG 792
Query: 82 -RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPT--------EEHTSIEF 121
+ V+ + LE P S ++ + PT E T +E
Sbjct: 793 CENPRVLRRLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTVVIDNEASNEATVVEA 852
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+G DRPGL + LAD ++ +A I + +RA +V S G + D K+++
Sbjct: 853 SGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQT-SEGGKVADAKKVT 908
>gi|265983322|ref|ZP_06096057.1| uridylyltransferase [Brucella sp. 83/13]
gi|306839592|ref|ZP_07472396.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
gi|264661914|gb|EEZ32175.1| uridylyltransferase [Brucella sp. 83/13]
gi|306405290|gb|EFM61565.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
Length = 934
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|239830994|ref|ZP_04679323.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
gi|239823261|gb|EEQ94829.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
Length = 969
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 890 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 935
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 882 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 940
Query: 177 LSTIKELLFNVL 188
I+ L VL
Sbjct: 941 QGNIRRKLLGVL 952
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 869 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 928
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 929 DLVGHKISNATRQGNIRRKL 948
>gi|290957105|ref|YP_003488287.1| protein P-II uridylyltransferase [Streptomyces scabiei 87.22]
gi|260646631|emb|CBG69728.1| putative protein P-II uridylyltransferase [Streptomyces scabiei
87.22]
Length = 816
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D +L ++ A++S+ G +D F V
Sbjct: 731 PPRVTVAAAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
DG + E ++ ET
Sbjct: 791 TGTDGAPLPGDEAASVARKLEET 813
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ +D GLL I R + L ++ A +ST+G D FYVT G P+ S+
Sbjct: 747 IEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVTGTDGAPLPGDEAASV 806
Query: 392 RRQIGHT 398
R++ T
Sbjct: 807 ARKLEET 813
>gi|163842415|ref|YP_001626819.1| PII uridylyl-transferase [Brucella suis ATCC 23445]
gi|189041205|sp|B0CIQ3.1|GLND_BRUSI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|163673138|gb|ABY37249.1| protein-P-II uridylyltransferase [Brucella suis ATCC 23445]
Length = 934
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|444309189|ref|ZP_21144829.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
gi|443487580|gb|ELT50342.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
Length = 934
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
I+ L VL
Sbjct: 906 QGNIRRKLLGVL 917
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
>gi|238751453|ref|ZP_04612945.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
gi|238710320|gb|EEQ02546.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
Length = 892
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V+I T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKEVI--DYIQQRLETDASF--------APSLR-----SSVGVMPT--EE 115
++ DG + +D+ I D +QQ + T ++ +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIRDALQQAM-TQPNYQHPRVRRLSPKLRHFSVPTETNYLPTHNER 815
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 816 RTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V + + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQ-CLEAAIE---------RRASEGLE--------- 331
A F + DG P++ + R +I+ L+ A+ RR S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIIRDALQQAMTQPNYQHPRVRRLSPKLRHFSVPTETN 807
Query: 332 -----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 YLPTHNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|50119969|ref|YP_049136.1| PII uridylyl-transferase [Pectobacterium atrosepticum SCRI1043]
gi|81170615|sp|Q6D8E5.1|GLND_ERWCT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|49610495|emb|CAG73940.1| [protein-PII] uridylyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 904
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 32/186 (17%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E +++P V + + + T I + S DRP L + L V + T R
Sbjct: 699 LEHDTNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 758
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 331
A F + DG P++ + E + LE A+ RR S L
Sbjct: 759 AMDTFIVLEPDGSPLAQD-RHEMIRHALEQALTQRHYQHPRVRRTSPKLRHFSVPTEVNF 817
Query: 332 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 818 LPTHTDRRSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIGERVEDLFILADSDRR 877
Query: 382 PVDPKI 387
+ P++
Sbjct: 878 ALKPEL 883
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
N P V+I + T I + S ++ + V L+ NL + A I +S G MD F
Sbjct: 704 NKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 763
Query: 72 NVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT--E 114
V++ DG + E+I + ++ T + +P LR + V +PT +
Sbjct: 764 IVLEPDGSPLAQDRHEMIRHALEQALTQRHYQHPRVRRTSPKLRHFSVPTEVNFLPTHTD 823
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E + D+PGL + + + +DL+ ++ A I T +R + + D S A+K
Sbjct: 824 RRSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIGERVEDLFILAD-SDRRALKPE 882
Query: 175 KRLSTIKEL 183
RL + L
Sbjct: 883 LRLKLQERL 891
>gi|251790747|ref|YP_003005468.1| PII uridylyl-transferase [Dickeya zeae Ech1591]
gi|247539368|gb|ACT07989.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya zeae Ech1591]
Length = 893
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 696 PMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 755
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT--EEH 116
++ DG + R + I+Q L P +R + VG +PT +
Sbjct: 756 LEPDGSPLAPDRHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGFLPTHNDRR 815
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ +E D+PGL + V V ADL+ ++ A I T +R
Sbjct: 816 SYMELVALDQPGLLARVGEVFADLNLSLHGARISTIGER 854
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 32/186 (17%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E +S+P V + + + T I + S DRP L + L V + T R
Sbjct: 689 LEHDASKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 748
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 331
A F + DG P++ + + + +E A+ RR S L
Sbjct: 749 AMDTFIVLEPDGSPLAPD-RHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGF 807
Query: 332 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
+EL D+ GLL+ + +F + +LS+ A ISTIG +V+D F + D
Sbjct: 808 LPTHNDRRSYMELVALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSERR 867
Query: 382 PVDPKI 387
+ P++
Sbjct: 868 ALSPEL 873
>gi|436841087|ref|YP_007325465.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169993|emb|CCO23364.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 843
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P ++ IDN + T+++V + ++ GIL + + + +N+ I+ A IS+ G DVF++
Sbjct: 753 PTQISIDNESSETYTLLEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHI 812
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
+G KI+DKE + + LE
Sbjct: 813 ESPEGGKIKDKEHANELVSALE 834
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
LE+ T DR G+L D+ +F ++ I+ A IST G V D F++ G + K
Sbjct: 769 LEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHIESPEGGKIKDK 823
>gi|456388589|gb|EMF54029.1| glnD protein [Streptomyces bottropensis ATCC 25435]
Length = 816
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D +L ++ A++S+ G +D F V
Sbjct: 731 PPRVTVAPAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
DG + E ++ ET
Sbjct: 791 TGTDGAPLPGDEAASVARKLEET 813
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ +D GLL I R + L ++ A +ST+G D FYVT G P+ S+
Sbjct: 747 IEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVTGTDGAPLPGDEAASV 806
Query: 392 RRQIGHT 398
R++ T
Sbjct: 807 ARKLEET 813
>gi|357476529|ref|XP_003608550.1| Uridylyl transferases-like protein [Medicago truncatula]
gi|355509605|gb|AES90747.1| Uridylyl transferases-like protein [Medicago truncatula]
Length = 109
Score = 47.8 bits (112), Expect = 0.011, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 340 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 396
+GLLS +T++ EN LSI R E G + YVT +G V+ I++ I+R+IG
Sbjct: 1 MGLLSKVTQVIHENGLSITRIEFGVEGEAAIGSLYVTGCSGQDVNENIVELIKREIG 57
>gi|253700950|ref|YP_003022139.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
gi|251775800|gb|ACT18381.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
Length = 894
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T+ + + G+ I + R + + L
Sbjct: 717 DVPGLFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDL 776
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSRPQVT 243
VL G P I++ E+ + V RVE +
Sbjct: 777 RQVLEGKVKVSALVAKRHRPSILS---------------EKAKPTVPARVEIDN------ 815
Query: 244 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+ DYTVI + + D+ LL+ I TLT + + ++T + FY++ + G
Sbjct: 816 --EVSSDYTVIDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGA 873
Query: 304 PISSEAERERVIQCLEAAIE 323
+ + + E + + L AA++
Sbjct: 874 KVMNPVKLEEIRKELLAAVD 893
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + ++ I++ L
Sbjct: 868 KDIFGAKVMNPVKLEEIRKEL 888
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+++ D++GLL IT L I ++IST +V D FYV D+ G V +P ++
Sbjct: 824 IDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGAKVMNPVKLEE 883
Query: 391 IRRQI 395
IR+++
Sbjct: 884 IRKEL 888
>gi|52841948|ref|YP_095747.1| protein-PII uridylyltransferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777582|ref|YP_005186020.1| protein-PII uridylyltransferase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|81170620|sp|Q5ZUS2.1|GLND_LEGPH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|52629059|gb|AAU27800.1| protein-PII uridylyltransferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364508397|gb|AEW51921.1| protein-PII uridylyltransferase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 861
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG ++
Sbjct: 788 QLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLN 841
>gi|336176218|ref|YP_004581593.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
gi|334857198|gb|AEH07672.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
Length = 765
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 83/223 (37%), Gaps = 43/223 (19%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA---AAVVHVT 163
+V +P + I DRPGL + VLA +V A N RA AAV +
Sbjct: 578 AVNPLPDDSMFEIVVVAPDRPGLLAATTGVLAVNRLDVHRASARGENGRALLQAAVA--S 635
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH----QIMFD 219
H G + ++ L VL G D A+ + RRL +I+FD
Sbjct: 636 THDGGPSA------GKLRGDLLRVLAGRVDL-DARIAGREQAYAAARRRLPPAPPKIIFD 688
Query: 220 DRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 279
D + TV+ +R+ DR +LF +V LTD V
Sbjct: 689 DSGSD---------------------------TVVEIRTPDRAGVLFRMVRALTDAGLGV 721
Query: 280 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 322
+V T + FY+R DG + RE V + AA+
Sbjct: 722 RTAIVATIGLDVVNAFYVREADGSTVGRPGRREEVANRVLAAL 764
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 5 YAKLIRRM--NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
YA RR+ PP+++ D++ TV+++ + ++ G+L ++++ L D L ++ A +++
Sbjct: 671 YAAARRRLPPAPPKIIFDDSGSD--TVVEIRTPDRAGVLFRMVRALTDAGLGVRTAIVAT 728
Query: 63 DGGWFMDVFNVIDCDGKKI 81
G ++ F V + DG +
Sbjct: 729 IGLDVVNAFYVREADGSTV 747
>gi|54294608|ref|YP_127023.1| hypothetical protein lpl1684 [Legionella pneumophila str. Lens]
gi|81170621|sp|Q5WVX6.1|GLND_LEGPL RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|53754440|emb|CAH15924.1| hypothetical protein lpl1684 [Legionella pneumophila str. Lens]
Length = 861
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG ++
Sbjct: 788 QLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLN 841
>gi|54297634|ref|YP_124003.1| hypothetical protein lpp1685 [Legionella pneumophila str. Paris]
gi|81170619|sp|Q5X4J1.1|GLND_LEGPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|53751419|emb|CAH12837.1| hypothetical protein lpp1685 [Legionella pneumophila str. Paris]
Length = 861
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG ++
Sbjct: 788 QLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLN 841
>gi|397667447|ref|YP_006508984.1| uridylyltransferase [Legionella pneumophila subsp. pneumophila]
gi|395130858|emb|CCD09107.1| uridylyltransferase [Legionella pneumophila subsp. pneumophila]
Length = 861
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG ++
Sbjct: 788 QLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLN 841
>gi|397664171|ref|YP_006505709.1| uridylyltransferase [Legionella pneumophila subsp. pneumophila]
gi|395127582|emb|CCD05781.1| uridylyltransferase [Legionella pneumophila subsp. pneumophila]
Length = 861
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG ++
Sbjct: 788 QLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLN 841
>gi|307610416|emb|CBW99986.1| hypothetical protein LPW_17431 [Legionella pneumophila 130b]
Length = 861
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG ++
Sbjct: 788 QLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLN 841
>gi|148359259|ref|YP_001250466.1| protein-PII uridylyltransferase [Legionella pneumophila str. Corby]
gi|296107306|ref|YP_003619006.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy]
gi|166226152|sp|A5ICM0.1|GLND_LEGPC RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148281032|gb|ABQ55120.1| protein-PII uridylyltransferase [Legionella pneumophila str. Corby]
gi|295649207|gb|ADG25054.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy]
Length = 861
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG ++
Sbjct: 788 QLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGYSLN 841
>gi|284104807|ref|ZP_06386156.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
gi|283830186|gb|EFC34444.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
Length = 911
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 11 RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV 70
R + V IDN T TVI V + +K G+L ++ + L D+ L + A I + +DV
Sbjct: 814 RRHRTEVKIDNETSDHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDV 873
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE 95
F V + +G+K+ + + IQ RL+
Sbjct: 874 FYVTERNGRKVEEARTCESIQARLQ 898
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 27/217 (12%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
E++ I F G+F ++ VLA V++A+I T D + S P
Sbjct: 717 EYSLIAFEAVA-SGMFMKMTGVLAARGLRVLDAQIVTRPDGIVVDTFLVKDSDFSCEPTP 775
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
RL + + +VLRG LS M + +R + F R R + +++
Sbjct: 776 ARLGKVGNAIVSVLRG---------ELSIEAFMEQNQR---VSFRSRMPIRRHRTEVKID 823
Query: 235 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
+++S +TVI + + D+ LL +I TL D+ V + T +
Sbjct: 824 NETS----------DHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDV 873
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331
FY+ +G + E R + ++A ++ + L+
Sbjct: 874 FYVTERNGRKV----EEARTCESIQARLQEQVDRFLQ 906
>gi|255074903|ref|XP_002501126.1| predicted protein [Micromonas sp. RCC299]
gi|226516389|gb|ACO62384.1| predicted protein [Micromonas sp. RCC299]
Length = 246
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 357
R VD P+ + R R + IE + L + T DR GLL DI R ++ SL++
Sbjct: 138 RDVDANPLGA---RPRGKVATKVTIEAMGAARSRLIVETADRPGLLVDIVRTLKDLSLNV 194
Query: 358 KRAEISTIGGKVKDTFYVT 376
AEI TIG K DT Y+T
Sbjct: 195 VSAEIDTIGPKASDTVYLT 213
>gi|398801948|ref|ZP_10561179.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
gi|398090630|gb|EJL81097.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
Length = 884
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 686 LNKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + R +I ++Q + T + P S+ + V +PT
Sbjct: 746 FIVLEPDGSPLAADRHPLIIQALEQAI-TQTEWVPPRTRRQSARLKHFSVDTEVNFLPTH 804
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + +E D+PGL + V V ADL ++ A I T +R + + D
Sbjct: 805 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAD 856
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P++++ +IQ LE AI RR S L+
Sbjct: 750 EPDGSPLAAD-RHPLIIQALEQAITQTEWVPPRTRRQSARLKHFSVDTEVNFLPTHTDRR 808
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + D + ++ D
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILADSERRALGVEMRD 868
Query: 390 SIRRQI 395
+++++
Sbjct: 869 VLQQRL 874
>gi|149374439|ref|ZP_01892213.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
gi|149361142|gb|EDM49592.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
Length = 881
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ T DR GLL+ + ++ E+ + + A+I+T+G +V+D F+VTD G + DP + +
Sbjct: 809 MEVITPDRPGLLARVGQVLLEHRVRLTNAKIATLGERVEDVFFVTDEHGEQISDPAVCQA 868
Query: 391 IRRQI 395
+++ +
Sbjct: 869 LQQDL 873
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V N+T TV++V + ++ G+L +V QVL + + + A I++ G DVF V
Sbjct: 793 PTEVTFSNDTINQRTVMEVITPDRPGLLARVGQVLLEHRVRLTNAKIATLGERVEDVFFV 852
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G++I D V +QQ L
Sbjct: 853 TDEHGEQISDPAVCQALQQDL 873
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 47 VLNDVNLVIKKAYISSDGGWF-MDVFNVIDCDGKKIR-DKEVIDYIQQRL---ETDASFA 101
VL +NL I A ISS G F + + V+D GK + D D ++ RL D
Sbjct: 716 VLEQLNLNIVDARISSSEGPFSISSYIVLDEKGKPLGIDPARKDRVRMRLIEELDDPEDY 775
Query: 102 PSL-------RSSVGVMPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
P + + PTE + T +E DRPGL + V VL + +
Sbjct: 776 PDIIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMEVITPDRPGLLARVGQVLLEHRVRLT 835
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
NA+I T +R V VTD G I DP +++ L +L
Sbjct: 836 NAKIATLGERVEDVFFVTDEH-GEQISDPAVCQALQQDLCQML 877
>gi|357410930|ref|YP_004922666.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces flavogriseus ATCC
33331]
gi|320008299|gb|ADW03149.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces flavogriseus ATCC
33331]
Length = 810
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ +D GLL I ++++ ++ A +ST+G D FYVTD G P+ P+ +
Sbjct: 742 IEVRAQDAPGLLHRIGHALEQSAVRVRSAHVSTLGANAVDAFYVTDPDGEPLAPEQAAQV 801
Query: 392 RRQI 395
R++
Sbjct: 802 AREV 805
>gi|410465082|ref|ZP_11318452.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409981801|gb|EKO38320.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 884
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 319 EAAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
E I+ +AS+ +++ +DRVGLL DI R E L A++ T G+V+D FYV
Sbjct: 794 EVTIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVRG 853
Query: 378 VTGNPV-DPKIIDSIRRQIGH 397
G V DP+ + I+ + H
Sbjct: 854 TAGRRVEDPEQLAEIKAALLH 874
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+PP V IDN TVI V ++ G+L + + L ++ L A + + G DVF
Sbjct: 791 SPPEVTIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFY 850
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
V G+++ D E + I+ L
Sbjct: 851 VRGTAGRRVEDPEQLAEIKAAL 872
>gi|238784877|ref|ZP_04628877.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
gi|238714194|gb|EEQ06206.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
Length = 892
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ + T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFVV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ +I + ++ T ++ +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQE 294
S++P V V + + T I + S DRP L +V L V + T R A
Sbjct: 694 STKPLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 295 FYIRHVDGLPISSEAERERVI-QCLEAAIE---------RRASEGLE------------- 331
F + DG P++ + R +I LE A+ RR S L
Sbjct: 754 FVVLEPDGSPLAQD--RHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPT 811
Query: 332 -------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 812 HNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|307245459|ref|ZP_07527547.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254413|ref|ZP_07536251.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258872|ref|ZP_07540604.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853800|gb|EFM86017.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862712|gb|EFM94668.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867223|gb|EFM99079.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 850
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N AT I + ++ + L++ Q+L+ + I A I +S G +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 IDCDGKKIRDKEVIDYIQQRLET------------------DASFAPSLRSSVGVMPTEE 115
+ +GK + + + I+Q LE SF + +
Sbjct: 719 TELNGKPLEEMRC-EQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ E DR GL + V +V L N+VNA+I T +R VT
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVT 825
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
EL T DR GLL+ ++ +F + L++ A+I+TIG +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 392 R 392
+
Sbjct: 841 K 841
>gi|212722976|ref|NP_001132108.1| uncharacterized protein LOC100193524 [Zea mays]
gi|413941849|gb|AFW74498.1| hypothetical protein ZEAMMB73_599986 [Zea mays]
Length = 215
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ + T+I++ + G+L +++ + D N+ + + Y S +G +D+F V
Sbjct: 36 VTMDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNGRCEIDLFAV- 94
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL + P + V P E +E +G RP +F
Sbjct: 95 QSDGKKILDQHRQRALCCRLRMEL-LRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 153
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV---TDHSTGYAIKDPKRLSTIKELLFN 186
++ L +L + AEI H DR V + +H A++ S I + + N
Sbjct: 154 DITLALKNLQKRIFLAEIGRHVVEDREWEVYRLHFGEEHELSSALR-----SKIVDEVTN 208
Query: 187 VLRGYD 192
+L G+D
Sbjct: 209 MLMGWD 214
>gi|116748021|ref|YP_844708.1| UTP-GlnB uridylyltransferase GlnD [Syntrophobacter fumaroxidans
MPOB]
gi|116697085|gb|ABK16273.1| UTP-GlnB uridylyltransferase, GlnD [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ T DR G+L IT +SI+ A+IST G +V D FYVTD++GN + D ++ +
Sbjct: 792 IEVYTWDRPGVLHCITDTLYHLDVSIQLAKISTPGAQVADVFYVTDLSGNKLMDYEMHEK 851
Query: 391 IR 392
IR
Sbjct: 852 IR 853
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 8 LIRRMNPPR----VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
++++ N PR V++D T+I+V + ++ G+L + L +++ I+ A IS+
Sbjct: 766 ILQQKNLPRKDDIVLVDEEASDFYTIIEVYTWDRPGVLHCITDTLYHLDVSIQLAKISTP 825
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
G DVF V D G K+ D E+ + I+
Sbjct: 826 GAQVADVFYVTDLSGNKLMDYEMHEKIR 853
>gi|284032664|ref|YP_003382595.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
gi|283811957|gb|ADB33796.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
Length = 752
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
L++ DR GLL DIT I+ A +ST+G + D FY+TD G+P+D
Sbjct: 683 LQIRAHDRPGLLYDITAAIASTGADIRSAHVSTLGAECVDVFYLTDGHGSPLD 735
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 202 SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL-NIEKDYTVITMRSKD 260
SPP + RL + D+ D R A K + +V +L + + TV+ +R+ D
Sbjct: 630 SPPDPVRLRDRLSVALRDNSDLVRRLAARDSSVRKGAASRVDLLPDASETATVLQIRAHD 689
Query: 261 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 311
RP LL+DI + + V+T E FY+ G P+ E R
Sbjct: 690 RPGLLYDITAAIASTGADIRSAHVSTLGAECVDVFYLTDGHGSPLDEEDAR 740
>gi|224117840|ref|XP_002317681.1| predicted protein [Populus trichocarpa]
gi|222860746|gb|EEE98293.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVID 75
++DN T++++ + G+L +++ L D N+ I + YI +D+F ++
Sbjct: 235 IMDNLLSPAHTLVQIVCQDHKGLLYDIMRTLKDYNIQISYGRFYIKHRRTCEIDLF-IMQ 293
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSE 132
DGKKI D + RLE + P + V P E +E +G RP +F +
Sbjct: 294 ADGKKIVDPNKQKALSSRLEMEL-VRPLRVAVVSRGPDTELMVANPVELSGKGRPLVFHD 352
Query: 133 VCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ L L+ + +AEI DR V V D G A+ P+R I+E ++ +L
Sbjct: 353 ITLALTMLNSCIFSAEIRRRMIGDREFEVYRVLLDEGEGLAV--PRR--KIEEQVWKMLM 408
Query: 190 GYD 192
G++
Sbjct: 409 GWE 411
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 297
E D VIT+ D+ L D+ + + G V+T Y F +
Sbjct: 17 EGDPAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVVGKSTTRWGL 76
Query: 298 ---RHVDGLPISSEAERERVIQCLEAAIER-RASEGLELELCTEDRVGLLSDITRIFREN 353
R V P S A I A ++ R + L+L DR GLL D+T + E
Sbjct: 77 LKKRLVGACPSCSSASG---ISYYTAELQPPRPPDVFLLKLACHDRKGLLHDVTGVLCEL 133
Query: 354 SLSIKRAEISTI-GGKVKDTFYVTD 377
L+IK+ ++ST G+V D F+VTD
Sbjct: 134 ELTIKKVKVSTTPDGRVMDLFFVTD 158
>gi|153004974|ref|YP_001379299.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028547|gb|ABS26315.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 927
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
++ + T DRPGL + V VLA ++ +AE+++ D + D
Sbjct: 731 YSELSLTARDRPGLLATVAGVLAAHRIDIQHAEVFSTPDGS----------------DLG 774
Query: 176 RLSTIKELLFNVLRGYDD-------FRKAKTSLSPPGIMNRERRLHQIMFDD-RDYERVE 227
RL+ +F LRG D+ +R A+T L+ ++ E L ++ R E
Sbjct: 775 RLAGRALDVFE-LRGPDERAVEPARWRAARTDLA--RVLAGEEGLDALLARRLRASSLPE 831
Query: 228 KAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 286
K + RV K V + N + ++V+ + + DR LL + T ++ V + T
Sbjct: 832 KPLPRVPTK-----VVIDNDSARAHSVVDVFTADRVGLLHTLARTFYELGLSVDLARIAT 886
Query: 287 GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324
A FY+R DG P+ E RV+ L AA+ R
Sbjct: 887 EGHRASDAFYVRTPDGAPLEGE-RAARVVAALTAAVSR 923
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
+++ T DRVGLL + R F E LS+ A I+T G + D FYV G P++
Sbjct: 854 VDVFTADRVGLLHTLARTFYELGLSVDLARIATEGHRASDAFYVRTPDGAPLE 906
>gi|238796605|ref|ZP_04640112.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
gi|238719583|gb|EEQ11392.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
Length = 892
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ + T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFVV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ +I + ++ T ++ +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 237 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQE 294
SS+P V V + + T I + S DRP L +V L V + T R A
Sbjct: 694 SSKPLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 295 FYIRHVDGLPISSEAERERVI-QCLEAAIE---------RRASEGLE------------- 331
F + DG P++ + R +I LE A+ RR S L
Sbjct: 754 FVVLEPDGSPLAQD--RHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPT 811
Query: 332 -------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 812 HNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|87198706|ref|YP_495963.1| PII uridylyl-transferase [Novosphingobium aromaticivorans DSM
12444]
gi|123490505|sp|Q2GAJ4.1|GLND_NOVAD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|87134387|gb|ABD25129.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Novosphingobium
aromaticivorans DSM 12444]
Length = 912
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 33/168 (19%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAE 310
T++T+ + D P L + I + + ++T R A F ++ G P++ ++
Sbjct: 722 TLVTVLAADHPGLFYRIAGGIHLAGGNIIDARIHTARNGTAVDNFLVQDPLGRPLNEASQ 781
Query: 311 RERVIQCLEAAIERR-------ASEGLE-------------------------LELCTED 338
ER+ + A+ R A+ L +E+ D
Sbjct: 782 IERLKNAIADALANRVKLVPQLAARPLARPRADAFDVRPIVIFDNKASNRFTVIEVGARD 841
Query: 339 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
R LL+ + R E L + A I+T G + DTFYVTDV G VD +
Sbjct: 842 RPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVTDVLGEKVDSE 889
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 32/261 (12%)
Query: 72 NVIDCDGKKIRDKEVI----DYIQQRLE-TDASFAPSLRSSVGVMPTEEHTSIEFTGTDR 126
N+I G+++ D I D I L+ D + L P T + D
Sbjct: 672 NLIGTVGRQLGDAYWIAEPEDIIALNLQQMDQALGELLSVEAHWYPARGATLVTVLAADH 731
Query: 127 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186
PGLF + + N+++A I T + A + G + + ++ +K + +
Sbjct: 732 PGLFYRIAGGIHLAGGNIIDARIHTARNGTAVDNFLVQDPLGRPLNEASQIERLKNAIAD 791
Query: 187 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 246
L NR + + Q+ R R R + RP V N
Sbjct: 792 AL------------------ANRVKLVPQLA--ARPLARP-----RADAFDVRPIVIFDN 826
Query: 247 IEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 305
+ +TVI + ++DRP LL + L + + +V + T A FY+ V G +
Sbjct: 827 KASNRFTVIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVTDVLGEKV 886
Query: 306 SSEAERERV-IQCLEAAIERR 325
SEA + V + LEAA +R+
Sbjct: 887 DSEARMKAVEKRLLEAAEDRK 907
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ DN TVI+V + ++ +L ++ + L + L++ A+I++ G +D F V
Sbjct: 820 PIVIFDNKASNRFTVIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVT 879
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+K+ + + +++RL
Sbjct: 880 DVLGEKVDSEARMKAVEKRL 899
>gi|378768474|ref|YP_005196947.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
gi|365187960|emb|CCF10910.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
Length = 882
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 693 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 747
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P+S + +IQ LE AI RR + L+
Sbjct: 748 EPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHTDRR 806
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 807 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEEMRQ 866
Query: 390 SIRRQI 395
++++++
Sbjct: 867 TLQQRL 872
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|296282185|ref|ZP_06860183.1| PII uridylyl-transferase [Citromicrobium bathyomarinum JL354]
Length = 922
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 34/179 (18%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPIS 306
E+ T++T+ + D P + I + + + ++T RT A F ++ G P
Sbjct: 726 ERGATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGRPFG 785
Query: 307 SEAERERVIQCL---------------EAAIERRASEGLE-----------------LEL 334
+ + R+ + + + + RR + E +E+
Sbjct: 786 EDDQLARIERSIADGLTGGVQLVPKLAKRPLPRRGAGAFEVQPFVAFDNDASHRFTVIEV 845
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIR 392
DR LL+ + R E I+ A I+ G + DTFYVTD+TG+ + DP ++++R
Sbjct: 846 GARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVTDLTGDKITDPGRLEALR 904
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKE 85
AT++ V + + GI +++ ++ V I A I ++ G+ +D F V D G+ + +
Sbjct: 729 ATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGRPFGEDD 788
Query: 86 VIDYIQQR----LETDASFAPSL------RSSVG---VMP--------TEEHTSIEFTGT 124
+ I++ L P L R G V P + T IE
Sbjct: 789 QLARIERSIADGLTGGVQLVPKLAKRPLPRRGAGAFEVQPFVAFDNDASHRFTVIEVGAR 848
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRP L + + L + H + +A I + +RAA +VTD TG I DP RL ++ L
Sbjct: 849 DRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVTD-LTGDKITDPGRLEALRAAL 907
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V DN+ TVI+V + ++ +L ++ + L + + +I+ A+I+ G D F V
Sbjct: 828 PFVAFDNDASHRFTVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVT 887
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI D ++ ++ L AS
Sbjct: 888 DLTGDKITDPGRLEALRAALSDAAS 912
>gi|226327059|ref|ZP_03802577.1| hypothetical protein PROPEN_00920 [Proteus penneri ATCC 35198]
gi|225204277|gb|EEG86631.1| ACT domain protein [Proteus penneri ATCC 35198]
Length = 144
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD ++ K+ D +
Sbjct: 71 MELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDSENKALNQKMKDEV 130
>gi|291616343|ref|YP_003519085.1| GlnD [Pantoea ananatis LMG 20103]
gi|386080595|ref|YP_005994120.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
gi|291151373|gb|ADD75957.1| GlnD [Pantoea ananatis LMG 20103]
gi|354989776|gb|AER33900.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
Length = 882
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 693 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 747
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P+S + +IQ LE AI RR + L+
Sbjct: 748 EPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHTDRR 806
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 807 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEEMRQ 866
Query: 390 SIRRQI 395
++++++
Sbjct: 867 TLQQRL 872
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|386014735|ref|YP_005933012.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
gi|327392794|dbj|BAK10216.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
Length = 882
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 693 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 747
Query: 299 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 331
DG P+S + +IQ LE AI RR + L+
Sbjct: 748 EPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHTDRR 806
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 807 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEEMRQ 866
Query: 390 SIRRQI 395
++++++
Sbjct: 867 TLQQRL 872
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|429105301|ref|ZP_19167170.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 681]
gi|426292024|emb|CCJ93283.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 681]
Length = 891
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 38/187 (20%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 297
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 298 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 331
DG P+S + E + Q LE AI +R + +
Sbjct: 756 LEPDGSPLSPD-RHEAIRQGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 814
Query: 332 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 388
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 389 DSIRRQI 395
+R+++
Sbjct: 875 QEVRQRL 881
>gi|190149913|ref|YP_001968438.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307263237|ref|ZP_07544857.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915044|gb|ACE61296.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|306871454|gb|EFN03178.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 850
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N AT I + ++ + L++ Q+L+ + I A I +S G +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 IDCDGKKIRDKEVIDYIQQRLET------------------DASFAPSLRSSVGVMPTEE 115
+ +GK + + + I+Q LE SF + +
Sbjct: 719 TELNGKPLEEMRC-EQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ E DR GL + V +V L N+VNA+I T +R VT
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVT 825
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
EL T DR GLL+ ++ +F + L++ A+I+TIG +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 392 R 392
+
Sbjct: 841 K 841
>gi|261822601|ref|YP_003260707.1| PII uridylyl-transferase [Pectobacterium wasabiae WPP163]
gi|261606614|gb|ACX89100.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium wasabiae WPP163]
Length = 903
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 705 PLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 764
Query: 74 IDCDGKKI-RDKEVIDYIQQRLETDASF-----------APSLR-----SSVGVMPT--E 114
++ DG + +D+ + I+Q LE + +P LR + V +PT +
Sbjct: 765 LEPDGSPLAQDRH--EMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTD 822
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 RRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKPD 881
Query: 175 KRLSTIKEL 183
RL + L
Sbjct: 882 LRLKLQERL 890
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E + +P V + + + T I + S DRP L + L V + T R
Sbjct: 698 LEHDTDKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 757
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 331
A F + DG P++ + E + Q LE ++ RR S L
Sbjct: 758 AMDTFIVLEPDGSPLAQD-RHEMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNF 816
Query: 332 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 817 LPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRR 876
Query: 382 PVDPKI 387
+ P +
Sbjct: 877 ALKPDL 882
>gi|385872915|gb|AFI91435.1| [Protein-PII] uridylyltransferase [Pectobacterium sp. SCC3193]
Length = 903
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 705 PLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 764
Query: 74 IDCDGKKI-RDKEVIDYIQQRLETDASF-----------APSLR-----SSVGVMPT--E 114
++ DG + +D+ + I+Q LE + +P LR + V +PT +
Sbjct: 765 LEPDGSPLAQDRH--EMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTD 822
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 RRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKPD 881
Query: 175 KRLSTIKEL 183
RL + L
Sbjct: 882 LRLKLQERL 890
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 233 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E + +P V + + + T I + S DRP L + L V + T R
Sbjct: 698 LEHDTDKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 757
Query: 291 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 331
A F + DG P++ + E + Q LE ++ RR S L
Sbjct: 758 AMDTFIVLEPDGSPLAQD-RHEMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNF 816
Query: 332 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 817 LPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRR 876
Query: 382 PVDPKI 387
+ P +
Sbjct: 877 ALKPDL 882
>gi|386393406|ref|ZP_10078187.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
gi|385734284|gb|EIG54482.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
Length = 881
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ +DRVGLL DI R E L A++ T G+V+D FYV G V DP+ +
Sbjct: 805 IEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGADGRRVEDPEQAEE 864
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 865 IKAALLH 871
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
PP V++DN TVI+V ++ G+L + + L ++ L A + + G DVF
Sbjct: 788 TPPVVLLDNRASDLFTVIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFY 847
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
V DG+++ D E + I+ L
Sbjct: 848 VRGADGRRVEDPEQAEEIKAAL 869
>gi|302781406|ref|XP_002972477.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
gi|302805113|ref|XP_002984308.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300148157|gb|EFJ14818.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300159944|gb|EFJ26563.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
Length = 236
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E + DR G + L DL NVV + + + +T +TG ++DP+
Sbjct: 46 TIVELSYGDRLGALLDTMKALKDLGLNVVKGSVAVSGKTKSNRLSITRAATGRKVEDPEL 105
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
L +I+ + + L Y K ++ +A G+ K
Sbjct: 106 LESIRLTIISNLLQYHPESSEKLAMG-------------------------EAFGKKPPK 140
Query: 237 S--SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 294
+ +TV + +++T+ + D+P LL DIV +T V ++T A
Sbjct: 141 KIDVKTHITVTDQGPARSLLTIETADKPGLLLDIVEMITATSVTVESAEIDTEGLVARDR 200
Query: 295 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 328
F++ + G +++ E ++ CL + R SE
Sbjct: 201 FHVSY--GGAALTKSLAEVLVNCLRFHLRRSESE 232
>gi|393722132|ref|ZP_10342059.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26605]
Length = 914
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 33/169 (19%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPIS 306
E+ T++T+ + D P L + I ++ + ++T R A F ++ G P
Sbjct: 720 ERGATLVTIYAADHPGLFYRIAGAISVAGGNIIDARIHTTRDGMALDNFLVQDPYGRPFD 779
Query: 307 SEAERERVIQCLEAAIERRA---------------SEGLEL-----------------EL 334
+ ER+ Q +E A+ R +E + E+
Sbjct: 780 EAPQLERLKQSIEDALANRGKMIDRLMAKPLPRPRAEAFAIVPNVLIDNKASNRFTVIEV 839
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
DR LL + ++ ++I A ++T G + DTFY+TD+TG+ +
Sbjct: 840 NARDRPALLHQLAYSLFQSRVTIHSAHVATYGERAVDTFYLTDLTGDKI 888
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L Q+ L + I A++++ G +D F +
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAYSLFQSRVTIHSAHVATYGERAVDTFYLT 881
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI + I++RL A+
Sbjct: 882 DLTGDKIGAASRLKTIERRLLAAAA 906
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 98/249 (39%), Gaps = 31/249 (12%)
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
++VID RL +A A L + V P T + D PGLF + ++ N
Sbjct: 693 EDVIDR-NARLVAEAGDA-QLSIAAQVYPERGATLVTIYAADHPGLFYRIAGAISVAGGN 750
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSP 203
+++A I T D A + G + +L +K+ + + L
Sbjct: 751 IIDARIHTTRDGMALDNFLVQDPYGRPFDEAPQLERLKQSIEDAL--------------- 795
Query: 204 PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRP 262
NR + + ++M R E A V P V + N + +TVI + ++DRP
Sbjct: 796 ---ANRGKMIDRLMAKPLPRPRAE-AFAIV------PNVLIDNKASNRFTVIEVNARDRP 845
Query: 263 KLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ--CLEA 320
LL + +L + + V T A FY+ + G I + A R + I+ L A
Sbjct: 846 ALLHQLAYSLFQSRVTIHSAHVATYGERAVDTFYLTDLTGDKIGA-ASRLKTIERRLLAA 904
Query: 321 AIERRASEG 329
A R ++
Sbjct: 905 AAGERMADA 913
>gi|238759952|ref|ZP_04621106.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
gi|238701859|gb|EEP94422.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
Length = 764
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 569 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 628
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASFAP-------------SLRSSVGVMPT--EEH 116
++ DG + +D+ +I Q+ T ++ P S+ + +PT E
Sbjct: 629 LEPDGSPLAQDRHPIIRQALQQAMTQPNYQPPRVRRLSPKLRHFSVPTEANFLPTHNERR 688
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 689 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 736
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 562 LEHDSTQPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 621
Query: 291 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIE---------RRASEGLE--------- 331
A F + DG P++ + R +I Q L+ A+ RR S L
Sbjct: 622 AMDTFIVLEPDGSPLAQD--RHPIIRQALQQAMTQPNYQPPRVRRLSPKLRHFSVPTEAN 679
Query: 332 -----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 680 FLPTHNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 736
>gi|419801642|ref|ZP_14326857.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|419844393|ref|ZP_14367684.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
gi|385193249|gb|EIF40627.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|386417518|gb|EIJ31997.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
Length = 861
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 33/196 (16%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N T I V ++ + +V+ + I A I +SD G+ D F + +
Sbjct: 675 VKISNRFSNGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDNFIITE 734
Query: 76 CDGKKIRDKEVIDYIQQRLET------------DASFAPSLRSSVGVMPTE--------- 114
+G+ +R + ++ LET SFA + + + T+
Sbjct: 735 LNGELVRSER-----RRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKK 789
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+ +
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTN-EKGIALTEE 848
Query: 175 KRLSTIKELLFNVLRG 190
+R LL NVL G
Sbjct: 849 ER-----GLLENVLYG 859
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
E ELE+ D+ GLL+ I++IF E L+I A+I+T+G K +D F +T+ G
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKG 842
>gi|251792356|ref|YP_003007081.1| PII uridylyl-transferase [Aggregatibacter aphrophilus NJ8700]
gi|422335916|ref|ZP_16416889.1| uridylyltransferase [Aggregatibacter aphrophilus F0387]
gi|247533748|gb|ACS96994.1| protein-P-II uridylyltransferase [Aggregatibacter aphrophilus
NJ8700]
gi|353346878|gb|EHB91162.1| uridylyltransferase [Aggregatibacter aphrophilus F0387]
Length = 866
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 384
E+EL DR GLL+D++ +F E L++ A+I+TIG K +D F +T+ G ++
Sbjct: 797 EMELFALDRAGLLADVSAVFCELELNLCNAKITTIGEKAEDFFILTNKEGRALN 850
>gi|317046980|ref|YP_004114628.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
gi|316948597|gb|ADU68072.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
Length = 884
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 298
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 299 HVDGLPISSEAERERVIQCLEAAI---------ERRASEGLE------------------ 331
DG P++++ +IQ LE AI RR S L+
Sbjct: 750 EPDGSPLAAD-RHPMIIQALEQAITQTQWVPPRARRQSSRLKHFSVETEVNFLPTHTDRR 808
Query: 332 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 389
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++ +
Sbjct: 809 SYLELIALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERRALDAEMRN 868
Query: 390 SIRRQI 395
+++++
Sbjct: 869 VLQQRL 874
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 686 LSKPLVLVSPQATRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + R +I ++Q + T + P S+ + V +PT
Sbjct: 746 FIVLEPDGSPLAADRHPMIIQALEQAI-TQTQWVPPRARRQSSRLKHFSVETEVNFLPTH 804
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 805 TDRRSYLELIALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|418052914|ref|ZP_12690991.1| UTP-GlnB uridylyltransferase, GlnD [Mycobacterium rhodesiae JS60]
gi|353179702|gb|EHB45259.1| UTP-GlnB uridylyltransferase, GlnD [Mycobacterium rhodesiae JS60]
Length = 827
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 80/203 (39%), Gaps = 51/203 (25%)
Query: 254 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERER 313
+ M + DR LL L V VN+ A F + G P ++E R++
Sbjct: 628 VAMIAPDRRGLLSKAAGVLALNSLRVHSASVNSAEGSAINTFVVSPHFGAPPAAELLRQQ 687
Query: 314 VIQCLE------AAIERR-----------------------------------ASEG-LE 331
I L+ AA+E+R +SEG L
Sbjct: 688 FILALDGELDVIAALEKRDADAAQYGTGRVGEHKPAVPINAVPAPPRILWHAGSSEGQLI 747
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ T DR GLL+ +TR+F + I A+I+T+G V D F ++ N V +++
Sbjct: 748 VEIRTTDRTGLLALLTRVFERAAADIAWAKITTLGSSVVDAFGISVQAQNSV-----ETV 802
Query: 392 RRQIGHTKLQVKRSTILAPKPPK 414
R Q+ V + AP P K
Sbjct: 803 RAQLERELYAV----LPAPPPAK 821
>gi|357635440|ref|ZP_09133318.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
gi|357583994|gb|EHJ49327.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
Length = 905
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 390
+E+ +DRVGLL DI R E L A++ T G+V+D FYV G V DP+ +
Sbjct: 829 IEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGADGRRVEDPEQAEE 888
Query: 391 IRRQIGH 397
I+ + H
Sbjct: 889 IKAALLH 895
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
PP V++DN TVI+V ++ G+L + + L ++ L A + + G DVF
Sbjct: 812 TPPVVLLDNRASDLFTVIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFY 871
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
V DG+++ D E + I+ L
Sbjct: 872 VRGADGRRVEDPEQAEEIKAAL 893
>gi|315497085|ref|YP_004085889.1| utp-glnb uridylyltransferase, glnd [Asticcacaulis excentricus CB
48]
gi|315415097|gb|ADU11738.1| UTP-GlnB uridylyltransferase, GlnD [Asticcacaulis excentricus CB
48]
Length = 959
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 48/188 (25%)
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--YAIKDPKRLST 179
TG DRPGLF+++ +L NVV A+++T A V + G + DP R+
Sbjct: 763 TGPDRPGLFADLARCFTNLGANVVGAQVFTSTTAQALDVFYVQDTQGKPFGHDDPGRIRQ 822
Query: 180 IKELLFNVLRG----------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
+++ L + G + R A +++P ++FDD
Sbjct: 823 MEKALEKAVGGEAAAPLIHKAINAHRTAAFAIAP-----------TVVFDD--------- 862
Query: 230 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 289
S PQ+T++ + +DRP LL D+ L + ++
Sbjct: 863 -------ESNPQMTIIEVS---------GRDRPGLLADVASVLARARLDTASAHIDCYGE 906
Query: 290 EAYQEFYI 297
A FY+
Sbjct: 907 RAVDAFYV 914
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNVIDCDGKK 80
+T +A + ++ G+ + + ++ V+ +S +DVF V D GK
Sbjct: 752 DTTRNAACFCITGPDRPGLFADLARCFTNLGANVVGAQVFTSTTAQALDVFYVQDTQGKP 811
Query: 81 IR--DKEVIDYIQQRLET---DASFAPSLRSSV--------GVMPT--------EEHTSI 119
D I +++ LE + AP + ++ + PT + T I
Sbjct: 812 FGHDDPGRIRQMEKALEKAVGGEAAAPLIHKAINAHRTAAFAIAPTVVFDDESNPQMTII 871
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E +G DRPGL ++V +VLA + +A I + +RA +V DH T + +R
Sbjct: 872 EVSGRDRPGLLADVASVLARARLDTASAHIDCYGERAVDAFYVVDHFTRKQLTKAQR--- 928
Query: 180 IKELLFNVLRGYDDFRKAKTS-LSPPGIMNR 209
D +A T L PP NR
Sbjct: 929 ------------DKVHRALTEVLDPPSAPNR 947
>gi|224105273|ref|XP_002333837.1| predicted protein [Populus trichocarpa]
gi|222838705|gb|EEE77070.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVID 75
++DN T++++ + G+L +++ L D N+ I + YI +D+F ++
Sbjct: 234 IMDNLLSPAHTLVQIVCQDHKGLLYDIMRTLKDYNIQISYGRFYIKHRRTCEIDLF-IMQ 292
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSE 132
DGKKI D + RLE + P + V P E +E +G RP +F +
Sbjct: 293 ADGKKIVDPNKQKALSSRLEMEL-VRPLRVAVVSRGPDTELMVANPVELSGKGRPLVFHD 351
Query: 133 VCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ L L+ + +AEI DR V V D G A+ P+R I+E ++ +L
Sbjct: 352 ITLALTMLNSCIFSAEIRRRMIGDREFEVYRVLLDEGEGLAV--PRR--KIEEQVWKMLM 407
Query: 190 GYD 192
G++
Sbjct: 408 GWE 410
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 18/147 (12%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 297
E D VIT+ D+ L D+ + + G V+T Y F +
Sbjct: 17 EGDPAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVVGKSTTRWGL 76
Query: 298 ---RHVDGLPISSEAERERVIQCLEAAIER-RASEGLELELCTEDRVGLLSDITRIFREN 353
R V P S A I A ++ R + L+L DR GLL D+T + E
Sbjct: 77 LKKRLVGACPSCSSASG---ISYYTAELQPPRPPDVFLLKLACHDRKGLLHDVTGVLCEL 133
Query: 354 SLSIKRAEISTI-GGKVKDTFYVTDVT 379
L+IK+ ++ST G+V D F+VTD +
Sbjct: 134 ELTIKKVKVSTTPDGRVMDLFFVTDTS 160
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 139/344 (40%), Gaps = 60/344 (17%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
D VI V+ +K G+ + +++ L I + +S+DG W VF+V+ GK
Sbjct: 18 GDPAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVV---GKSTTRW 74
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS---------IEFTGTDRPGLFSEVCA 135
+ +++RL PS S+ G+ ++ DR GL +V
Sbjct: 75 GL---LKKRL---VGACPSCSSASGISYYTAELQPPRPPDVFLLKLACHDRKGLLHDVTG 128
Query: 136 VLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLST---IKELLFNVLRGY 191
VL +L + ++ T D R + VTD S+ I + ++ T ++ ++ N +
Sbjct: 129 VLCELELTIKKVKVSTTPDGRVMDLFFVTDTSS--CIXNKRKEDTYDHLRAVMGNSMISC 186
Query: 192 D--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 243
D A++S P I E L M D+ +V + D P
Sbjct: 187 DIEMVGPEITACSAESSFLPTAIT--ENILPLQMPDELPSSLTSTSVSVIMDNLLSPA-- 242
Query: 244 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 303
+T++ + +D LL+DI+ TL D + +Y FYI+H
Sbjct: 243 -------HTLVQIVCQDHKGLLYDIMRTLKDYNIQI-----------SYGRFYIKHRRTC 284
Query: 304 PIS---SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLS 344
I +A+ ++++ + ++ S LE+EL RV ++S
Sbjct: 285 EIDLFIMQADGKKIV---DPNKQKALSSRLEMELVRPLRVAVVS 325
>gi|418938172|ref|ZP_13491734.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
gi|375055173|gb|EHS51446.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
Length = 944
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ DR+G L++IT + SL I A I+T G KV DTFYV D+ G V
Sbjct: 842 IEVECLDRIGFLAEITAALADLSLDIHSARITTFGEKVIDTFYVMDLVGQKV 893
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N+ TVI+V+ +++ G L ++ L D++L I A I++ G +D F V+
Sbjct: 827 PDVRISNSLSNKFTVIEVECLDRIGFLAEITAALADLSLDIHSARITTFGEKVIDTFYVM 886
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G+K+ ++ I RL+
Sbjct: 887 DLVGQKVTNENRQANIVNRLKA 908
>gi|302554421|ref|ZP_07306763.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
gi|302472039|gb|EFL35132.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
Length = 833
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V S + G+L ++ + L D N+ ++ A++S+ G +D F V
Sbjct: 748 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYV 807
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
+G + E + + ++LE
Sbjct: 808 TGPEGAPLPGDEA-ESVARKLE 828
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ ++D GLL I R + ++ ++ A +ST+G D FYVT G P+ +S+
Sbjct: 764 IEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYVTGPEGAPLPGDEAESV 823
Query: 392 RRQIGHT 398
R++ T
Sbjct: 824 ARKLEET 830
>gi|373468040|ref|ZP_09559325.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
gi|371756913|gb|EHO45715.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
Length = 863
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 328 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
E E+EL D+ G+L+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 388 IDSIR----RQIG 396
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + SL+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITEFNG------ELVEFDRRR-ELEQALTVSLQSEKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PG+ ++V + ++L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|418470937|ref|ZP_13040863.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
gi|371548442|gb|EHN76681.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
Length = 146
Score = 47.0 bits (110), Expect = 0.019, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++D++ ATV++V ++ G+L + +V +D L I+ A+++S G +D F V+
Sbjct: 22 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 81
Query: 75 DCDGKKIRDKEVIDYIQQRLE 95
D G+KI ++ + ++ LE
Sbjct: 82 DRKGRKITSEQRVAELRAALE 102
Score = 42.7 bits (99), Expect = 0.33, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 322 IERRASE-GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 380
++ ASE +E+ DR GLL+ ++R+F + L+I+ A +++ G + D+FYV D G
Sbjct: 26 VDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDRKG 85
Query: 381 NPV 383
+
Sbjct: 86 RKI 88
Score = 41.2 bits (95), Expect = 1.2, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E T +E +G DRPGL + + V +D N+ +A + ++ +RA +V D G I
Sbjct: 31 SETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDRK-GRKIT 89
Query: 173 DPKRLSTIKELLFNVL 188
+R++ ++ L VL
Sbjct: 90 SEQRVAELRAALEAVL 105
>gi|365864086|ref|ZP_09403779.1| PII uridylyl-transferase [Streptomyces sp. W007]
gi|364006483|gb|EHM27530.1| PII uridylyl-transferase [Streptomyces sp. W007]
Length = 814
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 320 AAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT 379
AA RRA+ +E+ +D GLL I R +++ ++ A +ST+G D FYVT
Sbjct: 737 AAGSRRATV---IEVRAQDAPGLLHRIGRALEGSAVRVRSAHVSTLGANAVDAFYVTGTD 793
Query: 380 GNPVDPKIIDSIRRQI 395
G P+ P + R++
Sbjct: 794 GEPLSPDRAAEVAREV 809
>gi|56459955|ref|YP_155236.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina loihiensis
L2TR]
gi|81170618|sp|Q5QXT0.1|GLND_IDILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56178965|gb|AAV81687.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina loihiensis
L2TR]
Length = 879
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I + T + + + + V VL+ L I A I ++ G+ MD F V
Sbjct: 687 PLILIGDENNYGTTELFIYHHEEGHLFASVAGVLDSQQLNILDAQILATRDGFVMDTFVV 746
Query: 74 IDCDGKKIRD--------KEVIDYIQQRLETDASFAP--------SLRSSVGVMPTEEH- 116
+ DGK + + ++++D + +R+ ++ P S+ + V +P++ H
Sbjct: 747 LQRDGKPLTEPHRIEEVKQQLLDVLHKRIPVPSTKRPLSRRMKNFSVATEVTFIPSKHHG 806
Query: 117 -TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV-TDHSTGYAIKDP 174
T+ E DRPGL +++ A+L + ++ A+I T ++A + V T+ T + K
Sbjct: 807 RTTFELVTLDRPGLIAKLAAILQQQNVILLAAKITTIGEQAEDLFIVTTEQQTALSDKQK 866
Query: 175 KRLST--IKELLF 185
K L IK+L F
Sbjct: 867 KTLKAKIIKDLEF 879
>gi|90580969|ref|ZP_01236770.1| PII uridylyl-transferase [Photobacterium angustum S14]
gi|90437847|gb|EAS63037.1| PII uridylyl-transferase [Vibrio angustum S14]
Length = 873
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P +++ T + V S +K + V+ L+ NL + A I +S
Sbjct: 672 ALLTHDHDKPLILLSKKATRGGTEVFVYSKDKAKLFAIVVSELDKKNLSVHDAQIMNSKD 731
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL-----ETDASFAP------SLRSSVGV 110
G+ +D F V+D +GK I R + + + L E AP ++++ V
Sbjct: 732 GYTLDTFMVLDPNGKAINENRHTTIRRTLTKALTVMKSERKIRRAPRKLLHFNVKTKVSF 791
Query: 111 MPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA-AVVHVTDHST 167
+PT+ + T +E D PGL ++V AV A+ + ++ A+I T +RA + V D
Sbjct: 792 LPTKTGKKTMMELVALDMPGLLAKVGAVFAEHNISLQAAKITTIGERAEDFFILVNDQGC 851
Query: 168 GYAIKDPKRL 177
+++ K L
Sbjct: 852 NLSVEQQKVL 861
>gi|319776024|ref|YP_004138512.1| uridylyltransferase [Haemophilus influenzae F3047]
gi|317450615|emb|CBY86834.1| uridylyltransferase [Haemophilus influenzae F3047]
Length = 863
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 322 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 382 PV 383
+
Sbjct: 845 AL 846
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 67/140 (47%), Gaps = 31/140 (22%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ ++P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSIVPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKR 176
+T+ G A+ +R
Sbjct: 833 EDFFILTNQ-FGQALAREER 851
>gi|329936726|ref|ZP_08286433.1| protein P-II uridylyltransferase [Streptomyces griseoaurantiacus
M045]
gi|329303956|gb|EGG47839.1| protein P-II uridylyltransferase [Streptomyces griseoaurantiacus
M045]
Length = 829
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+E+ +D GLL I R + + ++ A ST+G DT YVT TG+P+ P+ S+
Sbjct: 760 IEVRAQDAPGLLHRIGRALEKAGVRVRSAHASTLGANAVDTVYVTGPTGSPLPPQEATSV 819
Query: 392 RRQI 395
R +
Sbjct: 820 ARAL 823
>gi|345002318|ref|YP_004805172.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces sp. SirexAA-E]
gi|344317944|gb|AEN12632.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces sp. SirexAA-E]
Length = 816
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
+E+ +D GLL I R ++++ ++ A +ST+G D FYVTD G P+ P+
Sbjct: 748 IEVRAQDAPGLLHRIGRALEQSAVRVRSAHVSTLGANAVDAFYVTDPDGEPLVPE 802
>gi|421744909|ref|ZP_16182832.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
gi|406686683|gb|EKC90781.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
Length = 849
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ Q L L ++ A++S+ G +D F V
Sbjct: 764 PPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYV 823
Query: 74 IDCDGKKIRDKEV 86
D G+ + ++E
Sbjct: 824 TDAGGRPLGEEEA 836
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ +D GLL I + + L ++ A +ST+G D FYVTD G P+
Sbjct: 780 IEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYVTDAGGRPL 831
>gi|386826231|ref|ZP_10113338.1| (protein-PII) uridylyltransferase [Beggiatoa alba B18LD]
gi|386427115|gb|EIJ40943.1| (protein-PII) uridylyltransferase [Beggiatoa alba B18LD]
Length = 899
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 325 RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
R ++ LE+ T DR GLLS I + F + +K+A I+T+G +V+D F++TD
Sbjct: 807 RGNDHTILEVITTDRPGLLSRIAQAFVNCDVRLKKANIATLGSRVEDVFFITD 859
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDVFNVID 75
+V++ + +T V + + + ++ L + I AYI F M F+V++
Sbjct: 691 LVMERHNTQGSTEFTVFAHERDSLFAEITYFLEQQGITIVDAYIIPTQSEFTMAGFSVLE 750
Query: 76 CDGKKIRDKEVIDYIQQRL------ETDASFAPSLRS-----SVGVMPT---------EE 115
G +I D+E ++ I Q L +T F P R +PT +
Sbjct: 751 ESGAEIHDQERVEEILQALKDALSRDTSVPFYPINRRIPRQVKYFTVPTRITFTQDRGND 810
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT +E TDRPGL S + + + A I T R V +TD + + +
Sbjct: 811 HTILEVITTDRPGLLSRIAQAFVNCDVRLKKANIATLGSRVEDVFFITDRNN-HLLYSSD 869
Query: 176 RLSTIKELLFNVL 188
+L ++E L VL
Sbjct: 870 QLDALREELSMVL 882
>gi|16273605|ref|NP_439860.1| PII uridylyl-transferase [Haemophilus influenzae Rd KW20]
gi|260581059|ref|ZP_05848881.1| protein-P-II uridylyltransferase [Haemophilus influenzae RdAW]
gi|1169938|sp|P43919.1|GLND_HAEIN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|1574572|gb|AAC23362.1| uridylyl transferase (glnD) [Haemophilus influenzae Rd KW20]
gi|260092299|gb|EEW76240.1| protein-P-II uridylyltransferase [Haemophilus influenzae RdAW]
Length = 863
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 322 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 382 PV 383
+
Sbjct: 845 AL 846
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 71/145 (48%), Gaps = 31/145 (21%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ ++P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSIVPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDH-STGYAIKDPKRLSTI 180
+T+ A ++ +RL+++
Sbjct: 833 EDFFILTNQFGQALAREERERLNSV 857
>gi|308270950|emb|CBX27560.1| hypothetical protein N47_H23820 [uncultured Desulfobacterium sp.]
Length = 407
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
D L RM+ ++ IDNN+ + T+I+V S + G+L ++ L L IK A I++
Sbjct: 310 DHKPPLTSRMH--KINIDNNSSSFFTIIEVFSYDFPGLLYKITNALFSCRLDIKLAKIAT 367
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
+DVF V+D DG+K+ KE + I+
Sbjct: 368 KVDQVVDVFYVMDFDGQKVDSKERVSLIE 396
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 34/175 (19%)
Query: 246 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 305
++E D +IT+ +KDRP L + T + +NT + + + I
Sbjct: 215 HVESDTRIITICAKDRPGLFSKMAGVYTLNGLDILDARINTWKNGIALDIFTLKPPADQI 274
Query: 306 SSEAERERVIQCLEAA----------IERRASEGLE------------------------ 331
E + + + LE+A I + SE L+
Sbjct: 275 FEENKWAKTKENLESALSGHLDLTIAINEKLSEQLDHKPPLTSRMHKINIDNNSSSFFTI 334
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 386
+E+ + D GLL IT L IK A+I+T +V D FYV D G VD K
Sbjct: 335 IEVFSYDFPGLLYKITNALFSCRLDIKLAKIATKVDQVVDVFYVMDFDGQKVDSK 389
>gi|186896425|ref|YP_001873537.1| PII uridylyl-transferase [Yersinia pseudotuberculosis PB1/+]
gi|186699451|gb|ACC90080.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
PB1/+]
Length = 912
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 709 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 768
Query: 291 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 331
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 769 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 826
Query: 332 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 827 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 884
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 716 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 775
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE-TDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 776 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 835
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 836 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 884
>gi|242240399|ref|YP_002988580.1| PII uridylyl-transferase [Dickeya dadantii Ech703]
gi|242132456|gb|ACS86758.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya dadantii Ech703]
Length = 890
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 18/171 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 693 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 752
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R + I+Q L P +R + V +PT
Sbjct: 753 FIVLEPDGNPLAPDRHDMIRHAIEQALTQRDYQHPRIRRPSPKLRHFSVPTEVSFLPTHT 812
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + +E D+PGL + V V ADL+ ++ A I T +R + + D
Sbjct: 813 DRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILAD 863
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 31/166 (18%)
Query: 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 310
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 709 TEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGNPLAPD-R 767
Query: 311 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 341
+ + +E A+ RR S L +EL D+ G
Sbjct: 768 HDMIRHAIEQALTQRDYQHPRIRRPSPKLRHFSVPTEVSFLPTHTDRRSYMELIALDQPG 827
Query: 342 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 387
LL+ + +F + +LS+ A ISTIG +V+D F + D + P++
Sbjct: 828 LLARVGEVFADLNLSLHGARISTIGERVEDLFILADGERRALSPEL 873
>gi|329123179|ref|ZP_08251748.1| protein-P-II uridylyltransferase [Haemophilus aegyptius ATCC 11116]
gi|327471524|gb|EGF16968.1| protein-P-II uridylyltransferase [Haemophilus aegyptius ATCC 11116]
Length = 863
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 322 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 381
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 382 PV 383
+
Sbjct: 845 AL 846
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 67/140 (47%), Gaps = 31/140 (22%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ ++P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSIVPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKR 176
+T+ G A+ +R
Sbjct: 833 EDFFILTNQ-FGQALAREER 851
>gi|148264430|ref|YP_001231136.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
gi|146397930|gb|ABQ26563.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
Length = 898
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
D PGLFS + V+A N++ A+I T + A V + G+ I D R ++
Sbjct: 719 DVPGLFSMITGVMAANGMNILGAQILTSRNGKALDVLQVNSPQGFVITDESRWQRLE--- 775
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 244
DD R+ G + ++R I+ + K RVE +
Sbjct: 776 -------DDMRQVLQGKVRVGTLVKKRYRPTILTEKPK----PKFPTRVEIDN------- 817
Query: 245 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 302
+ DYTVI + + D+ LL+ I TLT++ + V+T + FY++ + G
Sbjct: 818 -EVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYVKDIFG 874
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN AD TVI + + +K G+L ++ L ++ L I + +S+ DVF V
Sbjct: 810 PTRVEIDNEVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYV 869
Query: 74 IDCDGKKI 81
D G K+
Sbjct: 870 KDIFGHKL 877
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+++ T D+VGLL IT E L I +++ST +V D FYV D+ G+ +
Sbjct: 826 IDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYVKDIFGHKL 877
>gi|170768427|ref|ZP_02902880.1| protein-P-II uridylyltransferase [Escherichia albertii TW07627]
gi|170122531|gb|EDS91462.1| protein-P-II uridylyltransferase [Escherichia albertii TW07627]
Length = 890
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + +VI Y +++ T +++ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSTDRHDVIRYGLEQVLTQSTWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
E + +E D+PGL ++V + ADL ++ A I T +R
Sbjct: 812 ERKSFLELIALDQPGLLAQVGKIFADLGISLHGARITTIGER 853
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 70/169 (41%), Gaps = 40/169 (23%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH--GMVNTGRTEAYQEFYI 297
PQ T + T I + S DRP LF VC D + + H + T A F +
Sbjct: 701 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIV 754
Query: 298 RHVDGLPISSEAERERVIQ-CLEAAI---------ERRASEGLE---------------- 331
DG P+S++ R VI+ LE + RR L
Sbjct: 755 LEPDGSPLSTD--RHDVIRYGLEQVLTQSTWQPPQPRRQPAKLRHFTVETEVTFLPTHTE 812
Query: 332 ----LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 376
LEL D+ GLL+ + +IF + +S+ A I+TIG +V+D F +
Sbjct: 813 RKSFLELIALDQPGLLAQVGKIFADLGISLHGARITTIGERVEDLFIIA 861
>gi|420852309|ref|ZP_15316947.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
gi|391732820|gb|EIT61338.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
Length = 891
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 291 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 331
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 807
Query: 332 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE-TDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|383188836|ref|YP_005198964.1| (protein-PII) uridylyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371587094|gb|AEX50824.1| (protein-PII) uridylyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 896
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V L+ NL I A I ++ G MD F V
Sbjct: 702 PLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGMAMDTFIV 761
Query: 74 IDCDGKKIRD--KEVIDYIQQRLETDASFAP------------SLRSSVGVMPT--EEHT 117
++ DG + E I Y ++ T A P S+++ V +PT + T
Sbjct: 762 LEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLPTHTDRRT 821
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+E D+PGL + + V +DL ++ A I T +R
Sbjct: 822 YMELVALDQPGLLARIGEVFSDLGLSLHGARISTIGER 859
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + T I + S DRP L + L + + T R
Sbjct: 695 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGM 754
Query: 291 AYQEFYIRHVDGLPISS---EAERERVIQCLEAAIE----RRASEGLE------------ 331
A F + DG P++ EA R + Q + A + RR S L
Sbjct: 755 AMDTFIVLEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLP 814
Query: 332 --------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+EL D+ GLL+ I +F + LS+ A ISTIG +V+D F + + +
Sbjct: 815 THTDRRTYMELVALDQPGLLARIGEVFSDLGLSLHGARISTIGERVEDLFILANGERRAL 874
Query: 384 DPKIIDSIRRQI 395
D + I R++
Sbjct: 875 DKQTRQEITRRL 886
>gi|108806513|ref|YP_650429.1| PII uridylyl-transferase [Yersinia pestis Antiqua]
gi|108813119|ref|YP_648886.1| PII uridylyl-transferase [Yersinia pestis Nepal516]
gi|145598953|ref|YP_001163029.1| PII uridylyl-transferase [Yersinia pestis Pestoides F]
gi|153946912|ref|YP_001399995.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 31758]
gi|162421348|ref|YP_001607773.1| PII uridylyl-transferase [Yersinia pestis Angola]
gi|165927056|ref|ZP_02222888.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939842|ref|ZP_02228382.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011922|ref|ZP_02232820.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166211324|ref|ZP_02237359.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399773|ref|ZP_02305291.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419478|ref|ZP_02311231.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425260|ref|ZP_02317013.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229837749|ref|ZP_04457909.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|229840971|ref|ZP_04461130.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229843072|ref|ZP_04463222.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229903561|ref|ZP_04518674.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|270487342|ref|ZP_06204416.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294503059|ref|YP_003567121.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|384121499|ref|YP_005504119.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|384125673|ref|YP_005508287.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|384141091|ref|YP_005523793.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|384413672|ref|YP_005623034.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420545665|ref|ZP_15043744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|420550968|ref|ZP_15048489.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|420556475|ref|ZP_15053365.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|420562065|ref|ZP_15058261.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|420567089|ref|ZP_15062800.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|420572758|ref|ZP_15067950.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|420578086|ref|ZP_15072772.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|420583421|ref|ZP_15077624.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|420588573|ref|ZP_15082266.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|420593889|ref|ZP_15087058.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|420599592|ref|ZP_15092159.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|420605051|ref|ZP_15097038.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|420610412|ref|ZP_15101885.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|420615712|ref|ZP_15106577.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|420621124|ref|ZP_15111351.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|420626166|ref|ZP_15115918.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|420636457|ref|ZP_15125179.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|420642053|ref|ZP_15130233.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|420647183|ref|ZP_15134929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|420652835|ref|ZP_15140002.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|420658345|ref|ZP_15144958.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|420663678|ref|ZP_15149726.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|420668650|ref|ZP_15154232.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|420673944|ref|ZP_15159049.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|420679489|ref|ZP_15164079.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|420684734|ref|ZP_15168782.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|420689909|ref|ZP_15173366.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|420695728|ref|ZP_15178458.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|420701095|ref|ZP_15183052.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|420707106|ref|ZP_15187933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|420712418|ref|ZP_15192723.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|420717821|ref|ZP_15197459.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|420723425|ref|ZP_15202276.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|420729057|ref|ZP_15207305.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|420734102|ref|ZP_15211856.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|420739572|ref|ZP_15216786.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|420744908|ref|ZP_15221485.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|420750699|ref|ZP_15226436.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|420755963|ref|ZP_15231009.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|420761839|ref|ZP_15235802.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|420767061|ref|ZP_15240513.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|420772050|ref|ZP_15244994.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|420777488|ref|ZP_15249858.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|420782988|ref|ZP_15254671.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|420788341|ref|ZP_15259387.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|420793815|ref|ZP_15264328.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|420798934|ref|ZP_15268933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|420804282|ref|ZP_15273744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|420809549|ref|ZP_15278518.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|420815238|ref|ZP_15283613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|420820411|ref|ZP_15288296.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|420825508|ref|ZP_15292851.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|420831275|ref|ZP_15298064.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|420836129|ref|ZP_15302443.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|420841271|ref|ZP_15307101.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|420846889|ref|ZP_15312173.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|420857822|ref|ZP_15321636.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|421762492|ref|ZP_16199289.1| PII uridylyl-transferase [Yersinia pestis INS]
gi|21362571|sp|Q8ZH68.2|GLND_YERPE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122980003|sp|Q1CFE4.1|GLND_YERPN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|123072950|sp|Q1CAN8.1|GLND_YERPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166232257|sp|A4TL94.1|GLND_YERPP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166990448|sp|A7FFG7.1|GLND_YERP3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238687289|sp|A9R397.1|GLND_YERPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|108776767|gb|ABG19286.1| (protein-PII) uridylyltransferase [Yersinia pestis Nepal516]
gi|108778426|gb|ABG12484.1| (protein-PII) uridylyltransferase [Yersinia pestis Antiqua]
gi|145210649|gb|ABP40056.1| (protein-PII) uridylyltransferase [Yersinia pestis Pestoides F]
gi|152958407|gb|ABS45868.1| protein-P-II uridylyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|162354163|gb|ABX88111.1| protein-P-II uridylyltransferase [Yersinia pestis Angola]
gi|165912245|gb|EDR30882.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920952|gb|EDR38176.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989188|gb|EDR41489.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207095|gb|EDR51575.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962219|gb|EDR58240.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050481|gb|EDR61889.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055660|gb|EDR65444.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229679331|gb|EEO75434.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|229689948|gb|EEO82007.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229697337|gb|EEO87384.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704126|gb|EEO91138.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|262361095|gb|ACY57816.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|262365337|gb|ACY61894.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|270335846|gb|EFA46623.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294353518|gb|ADE63859.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|320014176|gb|ADV97747.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|342856220|gb|AEL74773.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|391429975|gb|EIQ91756.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|391431125|gb|EIQ92735.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|391433526|gb|EIQ94853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|391446182|gb|EIR06245.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|391446790|gb|EIR06785.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|391450718|gb|EIR10319.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|391462288|gb|EIR20815.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|391463605|gb|EIR21997.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|391465595|gb|EIR23774.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|391479011|gb|EIR35853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|391480139|gb|EIR36844.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|391480383|gb|EIR37060.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|391494241|gb|EIR49495.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|391495407|gb|EIR50510.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|391498131|gb|EIR52924.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|391510216|gb|EIR63773.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|391515089|gb|EIR68138.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|391525731|gb|EIR77846.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|391528582|gb|EIR80384.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|391529444|gb|EIR81128.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|391542257|gb|EIR92732.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|391544003|gb|EIR94268.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|391544974|gb|EIR95120.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|391559083|gb|EIS07898.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|391559648|gb|EIS08382.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|391561235|gb|EIS09787.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|391574272|gb|EIS21199.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|391574858|gb|EIS21685.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|391586651|gb|EIS31929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|391587211|gb|EIS32406.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|391590188|gb|EIS34972.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|391603614|gb|EIS46779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|391603932|gb|EIS47047.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|391605164|gb|EIS48082.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|391617994|gb|EIS59482.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|391618549|gb|EIS59951.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|391625563|gb|EIS66037.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|391629625|gb|EIS69527.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|391641029|gb|EIS79505.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|391643627|gb|EIS81779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|391643718|gb|EIS81855.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|391653265|gb|EIS90247.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|391659125|gb|EIS95461.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|391664031|gb|EIS99803.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|391666070|gb|EIT01582.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|391672015|gb|EIT06896.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|391684241|gb|EIT17939.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|391685591|gb|EIT19109.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|391686547|gb|EIT19957.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|391698275|gb|EIT30597.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|391701914|gb|EIT33863.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|391702855|gb|EIT34691.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|391712365|gb|EIT43251.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|391718715|gb|EIT48932.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|391719043|gb|EIT49220.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|391729901|gb|EIT58834.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|391736472|gb|EIT64490.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|411176698|gb|EKS46713.1| PII uridylyl-transferase [Yersinia pestis INS]
Length = 893
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 291 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 331
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 807
Query: 332 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE-TDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|345009603|ref|YP_004811957.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
gi|344035952|gb|AEM81677.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
Length = 871
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 385
+E+ +D GLL I R ++++ A ST+G D FYVTD +G P+ P
Sbjct: 798 IEVRAQDAPGLLHRIGRALEHTGVAVRSAHASTLGANAVDAFYVTDSSGAPLKP 851
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
Y K RR PPRV + + ATVI+V + + G+L ++ + L + ++ A+
Sbjct: 769 YRKYPRRRGVHAPPPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEHTGVAVRSAHA 828
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
S+ G +D F V D G ++ + Q+
Sbjct: 829 STLGANAVDAFYVTDSSGAPLKPMHAAEVAQK 860
>gi|260913600|ref|ZP_05920076.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
gi|260632139|gb|EEX50314.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
Length = 872
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
E+ELC D+ GLL+ ++++F E L++ A+I+T+G K +D F +T+
Sbjct: 802 EMELCALDQTGLLAKVSQVFSELKLNLLNAKITTVGEKAEDFFILTN 848
>gi|114562446|ref|YP_749959.1| PII uridylyl-transferase [Shewanella frigidimarina NCIMB 400]
gi|114333739|gb|ABI71121.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella frigidimarina NCIMB
400]
Length = 857
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P V++ +T T + V S +K + V+ VL++ N+ + A I +S
Sbjct: 654 AILKHHHDEPLVLMSKHTTRGGTELFVYSKDKPKLFATVMTVLDNKNINVHDANIMTSKD 713
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD-ASFAPSL---------------RSSV 108
+ +D F +++ DG+ I I I++ LE AS P L + V
Sbjct: 714 NYALDTFVILEQDGEPIIQLSRIQSIRKALEKALASENPKLPKFRKLARIMKPFNVATHV 773
Query: 109 GVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+P+ H + +E D PGL ++V L + ++ A+I T +RA + +
Sbjct: 774 SFLPSARHGTSMMELITLDTPGLLAKVGDTLYRCNVTLLAAKITTIGERAEDFF-ILQNQ 832
Query: 167 TGYAIKDPKR 176
+G A+ +P++
Sbjct: 833 SGTALDEPQQ 842
>gi|424512908|emb|CCO66492.1| predicted protein [Bathycoccus prasinos]
Length = 250
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 49/216 (22%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+IDN + AT+++++ +K G L + + ++ L I +A I+ + F V
Sbjct: 35 PKVIIDNLSDPLATILEIEFGDKLGELADTCEAIRNLGLDISRAEITESN---QNRFYVT 91
Query: 75 D--CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG-------------------VMPT 113
D K + D Q L T + P + V V PT
Sbjct: 92 DHQSSEKITASARLEDLRQTVLTTMCYYHPEAQEFVQQTARNSKPYEVADDAETEYVTPT 151
Query: 114 EEH-----TSIEFTG-------------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
++ T I T TDRPGL SE+ VL DL+ NVV AEI T
Sbjct: 152 KKKRQIVPTRITVTSVSNGTKSKLLIETTDRPGLLSEIVRVLKDLNLNVVQAEIDTIGAA 211
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY 191
A + T H G A+ D +++L+ N L+ Y
Sbjct: 212 AVDTMLCTYH--GKALND-----NMEQLVVNTLQYY 240
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 336 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 376
T DR GLLS+I R+ ++ +L++ +AEI TIG DT T
Sbjct: 179 TTDRPGLLSEIVRVLKDLNLNVVQAEIDTIGAAAVDTMLCT 219
>gi|359148709|ref|ZP_09181829.1| PII uridylyl-transferase [Streptomyces sp. S4]
Length = 850
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ Q L L ++ A++S+ G +D F V
Sbjct: 765 PPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYV 824
Query: 74 IDCDGKKIRDKEV 86
D G+ + ++E
Sbjct: 825 TDAGGRPLGEEEA 837
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+E+ +D GLL I + + L ++ A +ST+G D FYVTD G P+
Sbjct: 781 IEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYVTDAGGRPL 832
>gi|322831586|ref|YP_004211613.1| UTP-GlnB uridylyltransferase, GlnD [Rahnella sp. Y9602]
gi|384256700|ref|YP_005400634.1| PII uridylyl-transferase [Rahnella aquatilis HX2]
gi|321166787|gb|ADW72486.1| UTP-GlnB uridylyltransferase, GlnD [Rahnella sp. Y9602]
gi|380752676|gb|AFE57067.1| PII uridylyl-transferase [Rahnella aquatilis HX2]
Length = 896
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V L+ NL I A I ++ G MD F V
Sbjct: 702 PLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGMAMDTFIV 761
Query: 74 IDCDGKKIRD--KEVIDYIQQRLETDASFAP------------SLRSSVGVMPT--EEHT 117
++ DG + E I Y ++ T A P S+++ V +PT + T
Sbjct: 762 LEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLPTHTDRRT 821
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+E D+PGL + V V +DL ++ A I T +R
Sbjct: 822 YMELVSLDQPGLLARVGEVFSDLGLSLHGARISTIGER 859
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + T I + S DRP L + L + + T R
Sbjct: 695 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGM 754
Query: 291 AYQEFYIRHVDGLPISS---EAERERVIQCLEAAIE----RRASEGLE------------ 331
A F + DG P++ EA R + Q + A + RR S L
Sbjct: 755 AMDTFIVLEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLP 814
Query: 332 --------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 383
+EL + D+ GLL+ + +F + LS+ A ISTIG +V+D F + + +
Sbjct: 815 THTDRRTYMELVSLDQPGLLARVGEVFSDLGLSLHGARISTIGERVEDLFILANGERRAL 874
Query: 384 DPKIIDSIRRQI 395
D + I R++
Sbjct: 875 DKQTRQEITRRL 886
>gi|420631353|ref|ZP_15120613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
gi|391510963|gb|EIR64418.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
Length = 893
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 291 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 331
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQPPPRVRRLSPKLRHFSVPTEA 807
Query: 332 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASFAP--------------SLRSSVGVMPT--EE 115
++ DG + +D+ +I + Q+ + + P S+ + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQPPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|356548347|ref|XP_003542564.1| PREDICTED: uncharacterized protein LOC100816138 [Glycine max]
Length = 412
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 248 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 297
+ D T++T+ D+ L D+ + + G V+T Y F++
Sbjct: 17 DGDPTLLTVNCPDKTGLGCDLCRIILFFGLNILRGDVSTDGKWCYIVFWVVGKQRTRWSL 76
Query: 298 ---RHVDGLPISSEAERERVIQCLEAAIE-RRASEGLELELCTEDRVGLLSDITRIFREN 353
R ++ P S A I + ++ + S+ L C DR GLL D+T + E
Sbjct: 77 LKKRLIEACPSFSSASG---ISYYRSDLQPSKPSDVFLLNFCCHDRKGLLHDVTEVLCEL 133
Query: 354 SLSIKRAEISTI-GGKVKDTFYVTD 377
L+IK+ ++ST GKV D F++TD
Sbjct: 134 ELTIKKVKVSTTPDGKVIDLFFITD 158
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74
+ +DN T++++ + G+L +++ L D N+ I ++ G +D+F ++
Sbjct: 235 ITMDNLLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTAKPRGKCEIDLF-IM 293
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D + + RL + P + V P E +E +G RP +F
Sbjct: 294 QADGKKIVDPNKQNSLSSRLRMEL-LRPLRVAIVSRGPDTELLVSNPVELSGKGRPLVFY 352
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVL 188
++ L L + A+I H DR V + D G ++ K ++E ++ +L
Sbjct: 353 DITLALKMLDTCIFLAKIGRHLIGDREWEVYRILLDEGEGLSVPRNK----VEEGVWKML 408
Query: 189 RGYD 192
G++
Sbjct: 409 MGWE 412
>gi|22127015|ref|NP_670438.1| PII uridylyl-transferase [Yersinia pestis KIM10+]
gi|45442577|ref|NP_994116.1| PII uridylyl-transferase [Yersinia pestis biovar Microtus str.
91001]
gi|149366957|ref|ZP_01888990.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|167468856|ref|ZP_02333560.1| PII uridylyl-transferase [Yersinia pestis FV-1]
gi|170023313|ref|YP_001719818.1| PII uridylyl-transferase [Yersinia pseudotuberculosis YPIII]
gi|218928210|ref|YP_002346085.1| PII uridylyl-transferase [Yersinia pestis CO92]
gi|21960062|gb|AAM86689.1|AE013914_9 protein PII [Yersinia pestis KIM10+]
gi|45437442|gb|AAS62993.1| [protein-PII] uridylyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|115346821|emb|CAL19707.1| [protein-PII] uridylyltransferase [Yersinia pestis CO92]
gi|149290571|gb|EDM40647.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|169749847|gb|ACA67365.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
YPIII]
Length = 912
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 709 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 768
Query: 291 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 331
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 769 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 826
Query: 332 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 827 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 884
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 716 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 775
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE-TDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 776 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 835
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 836 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 875
>gi|357022083|ref|ZP_09084314.1| PII uridylyl-transferase [Mycobacterium thermoresistibile ATCC
19527]
gi|356479831|gb|EHI12968.1| PII uridylyl-transferase [Mycobacterium thermoresistibile ATCC
19527]
Length = 830
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 51/205 (24%)
Query: 254 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERER 313
+T+ + DR LL L V VN+ A F + G P ++ R++
Sbjct: 628 VTLVAPDRRGLLSKAAGVLALNSLRVHSASVNSHHGSAINTFVVSPHFGAPPAANLLRQQ 687
Query: 314 VIQCLE------AAIERRASEG-----------------------------------LEL 332
+I L+ AA+ERR +G L +
Sbjct: 688 LILALDGDLDVLAALERRDHDGAPGSHRPGEPAAAVPVIAAPAPPRVLWFDGSAPGELVV 747
Query: 333 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTF--YVTDVTGNPVDPKIIDS 390
++ DR GLL+ +T +F + + I A+++T+G V D F V +TG DP +
Sbjct: 748 QIRAADRPGLLARLTAVFERDGVDIAWAKVTTLGAAVVDVFGIVVPALTGGTADPA---A 804
Query: 391 IRRQIGHTKLQVKRSTILAPKPPKE 415
+R ++ H V L PP E
Sbjct: 805 VRGELEHDLYAV-----LPTPPPAE 824
>gi|51597320|ref|YP_071511.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 32953]
gi|81638764|sp|Q667I7.1|GLND_YERPS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|51590602|emb|CAH22243.1| [protein-PII] uridylyltransferase [Yersinia pseudotuberculosis IP
32953]
Length = 893
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 233 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 290
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 291 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 331
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 807
Query: 332 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 377
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE-TDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
>gi|255585359|ref|XP_002533376.1| amino acid binding protein, putative [Ricinus communis]
gi|223526783|gb|EEF29007.1| amino acid binding protein, putative [Ricinus communis]
Length = 413
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDV 70
NP V +DN T+++ + G++ +++ L D N+ I + Y + G +D+
Sbjct: 232 NPVSVSMDNTLSRSHTLLQFLCKDHKGLMYDIMRTLKDYNIQISYGRFYATPKGHCEVDL 291
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F ++ DGKKI D D + RL + P + V P E +E + RP
Sbjct: 292 F-IMQADGKKIIDSYKQDALCSRLRMEL-LRPLRVAVVSRGPDTELLVANPVELSERGRP 349
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELL 184
+F ++ L L+ + + EI H +DR V + D G+ + K I+E +
Sbjct: 350 LVFYDITLALKILNTRIFSVEIGRHMIHDREWEVYRILLDEGDGFTVPRNK----IEESV 405
Query: 185 FNVLRGYD 192
L G+D
Sbjct: 406 RKRLMGWD 413
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 335 CTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD 377
C+ DR GLL D+T + E L+IKR ++ST G+V D F++TD
Sbjct: 116 CSYDREGLLHDVTEVLCELELTIKRVKVSTAPDGRVMDLFFITD 159
>gi|294635116|ref|ZP_06713627.1| protein-P-II uridylyltransferase [Edwardsiella tarda ATCC 23685]
gi|451965796|ref|ZP_21919052.1| [protein-PII] uridylyltransferase [Edwardsiella tarda NBRC 105688]
gi|291091493|gb|EFE24054.1| protein-P-II uridylyltransferase [Edwardsiella tarda ATCC 23685]
gi|451315368|dbj|GAC64414.1| [protein-PII] uridylyltransferase [Edwardsiella tarda NBRC 105688]
Length = 884
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+EL DR GLL+ I IF E LS+ A I+TIG +V+D F + D + P++ +
Sbjct: 811 MELVALDRPGLLARIGEIFAEMGLSLHGARITTIGERVEDLFILADGERRALTPEMQHEL 870
Query: 392 RRQIGHTKLQVKR 404
+++ T L +
Sbjct: 871 AQRLTETLLSADK 883
>gi|269138091|ref|YP_003294791.1| PII uridylyl-transferase [Edwardsiella tarda EIB202]
gi|387866822|ref|YP_005698291.1| uridylyltransferase [Edwardsiella tarda FL6-60]
gi|267983751|gb|ACY83580.1| PII uridylyl-transferase [Edwardsiella tarda EIB202]
gi|304558135|gb|ADM40799.1| uridylyltransferase [Edwardsiella tarda FL6-60]
Length = 884
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
+EL DR GLL+ I IF E LS+ A I+TIG +V+D F + D + P++ +
Sbjct: 811 MELVALDRPGLLAHIGEIFAEMGLSLHGARITTIGERVEDLFILADGERRALTPEMQREL 870
Query: 392 RRQIGHTKLQVKRS 405
+++ T L +
Sbjct: 871 AQRLTETLLSADKG 884
>gi|387127004|ref|YP_006295609.1| (Protein-PII) uridylyltransferase [Methylophaga sp. JAM1]
gi|386274066|gb|AFI83964.1| (Protein-PII) uridylyltransferase [Methylophaga sp. JAM1]
Length = 866
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 25/180 (13%)
Query: 224 ERVEKAVGRVEDKSSRPQVTVLNIEKDYTV-ITMRSKDRPKLLFDIVCTLTDMQYVVFHG 282
E V + GR+E+ P + V +T+ + + +++R L + +L +Q +
Sbjct: 664 EIVWQTNGRLENPEQEPLILVRPHSDRHTLELFIYAQNRQALFAAMTASLEQLQLNILDA 723
Query: 283 MVN-TGRTEAYQEFYI-----RHVDGL-PISSEAERERVIQCLEAAIERRASEGLE---- 331
+N G A F I R+ D + +S + E +I + + R ++ +
Sbjct: 724 KININGDDSALNTFIINGAQQRYEDIINAVSKQLANEELISGYKPQLIPRTTKLFKTEPV 783
Query: 332 -------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 378
+EL T DR GLLS + ++F + + + A++ T+G +V+D F++T++
Sbjct: 784 IKFTTNIQQNHTVMELYTHDRPGLLSAVAQVFLSHQIQVINAKMVTLGDQVEDVFFITNL 843
>gi|413917417|gb|AFW57349.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917418|gb|AFW57350.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 210
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNK 37
DDEY K I+ MNPPRV IDN +C A VI +SV++
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAIVIH-ESVHR 58
>gi|392944986|ref|ZP_10310628.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
gi|392288280|gb|EIV94304.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
Length = 807
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 240 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 299
PQV + TV+ +R+ DR +LF IV L+ ++ V +V T + FY++
Sbjct: 683 PQVIFDDGLGSTTVLEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFYVQE 742
Query: 300 VDGLPISSEAERERVIQCLEAAI 322
DG P++ +A R + + + AA+
Sbjct: 743 ADGRPVADDARRREIARAVLAAL 765
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
PP+V+ D+ TV++V + ++ G+L ++++ L+ + L + A +++ G +D F
Sbjct: 681 GPPQVIFDDG-LGSTTVLEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFY 739
Query: 73 VIDCDGKKIRD 83
V + DG+ + D
Sbjct: 740 VQEADGRPVAD 750
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 391
LE+ DR G+L I R L + A ++T+G V D FYV + G PV D+
Sbjct: 697 LEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFYVQEADGRPV---ADDAR 753
Query: 392 RRQIGHTKL 400
RR+I L
Sbjct: 754 RREIARAVL 762
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,671,853,019
Number of Sequences: 23463169
Number of extensions: 272018340
Number of successful extensions: 671979
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 548
Number of HSP's that attempted gapping in prelim test: 663147
Number of HSP's gapped (non-prelim): 6858
length of query: 441
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 295
effective length of database: 8,933,572,693
effective search space: 2635403944435
effective search space used: 2635403944435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)