Query 013535
Match_columns 441
No_of_seqs 336 out of 2058
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 12:24:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013535.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013535hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 2.4E-18 8.1E-23 159.1 13.2 143 250-397 4-161 (195)
2 2nyi_A Unknown protein; protei 99.7 1.9E-17 6.7E-22 152.9 16.1 156 26-189 4-164 (195)
3 1u8s_A Glycine cleavage system 99.7 1.4E-16 4.9E-21 146.5 16.6 139 251-397 6-164 (192)
4 1u8s_A Glycine cleavage system 99.7 1.5E-15 5E-20 139.7 16.9 156 27-189 6-167 (192)
5 3p96_A Phosphoserine phosphata 98.9 1.8E-08 6.3E-13 102.8 17.6 150 26-189 11-167 (415)
6 3p96_A Phosphoserine phosphata 98.8 1.3E-07 4.6E-12 96.3 16.5 122 250-376 11-149 (415)
7 2f06_A Conserved hypothetical 98.5 2.1E-06 7.3E-11 74.5 15.1 112 252-375 7-118 (144)
8 2f06_A Conserved hypothetical 98.4 5E-06 1.7E-10 72.1 15.0 110 28-161 7-117 (144)
9 3l76_A Aspartokinase; alloster 98.1 0.0046 1.6E-07 65.9 32.3 266 29-361 272-562 (600)
10 1zpv_A ACT domain protein; str 98.1 2E-05 6.9E-10 62.5 10.0 67 115-188 4-70 (91)
11 1zpv_A ACT domain protein; str 98.1 2.7E-05 9.3E-10 61.7 10.3 50 27-76 5-54 (91)
12 2ko1_A CTR148A, GTP pyrophosph 97.9 5.5E-05 1.9E-09 59.3 8.9 64 329-397 5-68 (88)
13 3obi_A Formyltetrahydrofolate 97.8 0.00063 2.2E-08 65.9 17.2 117 27-151 6-124 (288)
14 2ko1_A CTR148A, GTP pyrophosph 97.8 0.00011 3.7E-09 57.5 9.2 64 115-185 4-67 (88)
15 3o1l_A Formyltetrahydrofolate 97.8 0.00036 1.2E-08 68.0 14.6 118 26-151 21-140 (302)
16 3n0v_A Formyltetrahydrofolate 97.8 0.00086 2.9E-08 64.9 16.7 116 27-151 8-125 (286)
17 3nrb_A Formyltetrahydrofolate 97.7 0.0011 3.9E-08 64.0 17.2 117 26-152 6-124 (287)
18 3lou_A Formyltetrahydrofolate 97.7 0.0012 4.1E-08 64.0 16.5 119 26-151 9-130 (292)
19 2re1_A Aspartokinase, alpha an 97.6 0.00052 1.8E-08 61.0 11.1 110 25-147 23-137 (167)
20 2re1_A Aspartokinase, alpha an 97.6 0.00084 2.9E-08 59.6 12.3 103 249-360 23-137 (167)
21 3obi_A Formyltetrahydrofolate 97.4 0.0043 1.5E-07 60.0 16.6 109 251-364 6-124 (288)
22 3o1l_A Formyltetrahydrofolate 97.4 0.0037 1.3E-07 60.8 15.7 108 250-364 21-140 (302)
23 2dtj_A Aspartokinase; protein- 97.2 0.0028 9.6E-08 56.8 11.9 114 249-375 13-140 (178)
24 3n0v_A Formyltetrahydrofolate 97.2 0.0066 2.3E-07 58.6 15.2 108 251-364 8-125 (286)
25 3lou_A Formyltetrahydrofolate 97.2 0.0084 2.9E-07 58.1 15.6 108 251-364 10-130 (292)
26 2dt9_A Aspartokinase; protein- 97.2 0.0011 3.8E-08 58.8 8.7 109 25-147 14-129 (167)
27 3nrb_A Formyltetrahydrofolate 97.1 0.015 5E-07 56.2 15.6 108 250-364 6-123 (287)
28 2f1f_A Acetolactate synthase i 97.1 0.0019 6.5E-08 57.2 8.6 63 116-186 3-67 (164)
29 2dtj_A Aspartokinase; protein- 97.0 0.0018 6.1E-08 58.1 8.5 110 25-147 13-129 (178)
30 2dt9_A Aspartokinase; protein- 97.0 0.0052 1.8E-07 54.3 10.9 115 249-376 14-141 (167)
31 2pc6_A Probable acetolactate s 96.9 0.0032 1.1E-07 55.8 8.9 63 116-186 4-68 (165)
32 3l76_A Aspartokinase; alloster 96.8 0.24 8.3E-06 52.6 24.3 196 16-283 348-562 (600)
33 2f1f_A Acetolactate synthase i 96.8 0.0036 1.2E-07 55.4 8.4 62 330-397 4-67 (164)
34 2pc6_A Probable acetolactate s 96.6 0.0062 2.1E-07 53.9 7.9 62 330-397 5-68 (165)
35 3s1t_A Aspartokinase; ACT doma 96.5 0.041 1.4E-06 49.3 13.1 110 26-148 15-131 (181)
36 2fgc_A Acetolactate synthase, 96.3 0.015 5.3E-07 52.5 8.9 64 116-187 29-94 (193)
37 2fgc_A Acetolactate synthase, 96.2 0.014 4.7E-07 52.8 8.2 63 329-397 29-93 (193)
38 2jhe_A Transcription regulator 96.2 0.013 4.6E-07 51.4 8.0 35 331-365 2-36 (190)
39 3s1t_A Aspartokinase; ACT doma 96.2 0.047 1.6E-06 48.9 11.6 103 250-361 15-131 (181)
40 4go7_X Aspartokinase; transfer 95.9 0.021 7E-07 52.2 8.0 111 25-148 33-150 (200)
41 3ab4_A Aspartokinase; aspartat 95.7 0.16 5.3E-06 51.6 14.6 109 26-147 263-378 (421)
42 2jhe_A Transcription regulator 95.5 0.054 1.9E-06 47.4 8.9 59 118-186 2-60 (190)
43 3ab4_A Aspartokinase; aspartat 95.3 0.2 6.8E-06 50.8 13.6 103 249-360 262-378 (421)
44 4go7_X Aspartokinase; transfer 95.0 0.13 4.6E-06 46.7 10.1 105 248-361 32-150 (200)
45 1y7p_A Hypothetical protein AF 95.0 0.03 1E-06 51.5 5.6 61 116-186 4-69 (223)
46 1y7p_A Hypothetical protein AF 94.9 0.051 1.8E-06 49.9 7.0 47 27-73 4-55 (223)
47 3c1m_A Probable aspartokinase; 94.6 0.25 8.6E-06 50.9 12.2 106 26-145 317-436 (473)
48 3c1m_A Probable aspartokinase; 92.6 0.59 2E-05 48.1 10.8 113 249-375 316-451 (473)
49 1ygy_A PGDH, D-3-phosphoglycer 91.7 0.43 1.5E-05 49.8 8.6 63 327-393 452-516 (529)
50 1sc6_A PGDH, D-3-phosphoglycer 91.4 0.31 1E-05 49.2 6.9 46 330-375 332-377 (404)
51 3mwb_A Prephenate dehydratase; 91.4 0.92 3.2E-05 44.0 10.0 92 274-385 163-258 (313)
52 2qmx_A Prephenate dehydratase; 90.8 0.5 1.7E-05 45.3 7.4 55 329-384 200-255 (283)
53 1sc6_A PGDH, D-3-phosphoglycer 90.4 0.71 2.4E-05 46.5 8.4 48 26-73 330-377 (404)
54 3luy_A Probable chorismate mut 89.9 1.6 5.4E-05 42.7 10.2 48 338-386 217-265 (329)
55 3tvi_A Aspartokinase; structur 88.1 1.4 4.9E-05 44.9 8.8 106 27-148 298-409 (446)
56 1ygy_A PGDH, D-3-phosphoglycer 87.5 2 6.8E-05 44.7 9.7 62 26-92 453-516 (529)
57 2qmw_A PDT, prephenate dehydra 86.9 1.6 5.3E-05 41.4 7.7 80 275-377 154-238 (267)
58 3tvi_A Aspartokinase; structur 86.5 2.9 0.0001 42.6 10.0 114 250-375 297-421 (446)
59 3k5p_A D-3-phosphoglycerate de 84.8 5.3 0.00018 40.3 10.8 50 113-162 340-389 (416)
60 3mtj_A Homoserine dehydrogenas 81.9 1.2 4E-05 45.5 4.7 33 329-361 359-391 (444)
61 2cdq_A Aspartokinase; aspartat 81.8 4.2 0.00014 42.1 8.9 137 27-189 341-483 (510)
62 3luy_A Probable chorismate mut 80.1 13 0.00044 36.2 11.2 49 116-164 206-257 (329)
63 3k5p_A D-3-phosphoglycerate de 78.4 5.2 0.00018 40.3 8.0 49 25-73 341-389 (416)
64 2qmx_A Prephenate dehydratase; 77.8 7.4 0.00025 37.1 8.5 50 115-164 199-249 (283)
65 2cdq_A Aspartokinase; aspartat 76.3 5.3 0.00018 41.4 7.6 118 249-375 339-466 (510)
66 3mah_A Aspartokinase; aspartat 74.2 2.7 9.1E-05 36.2 4.0 99 26-148 17-121 (157)
67 3mwb_A Prephenate dehydratase; 71.8 12 0.00041 36.2 8.4 50 115-164 200-251 (313)
68 3mtj_A Homoserine dehydrogenas 69.2 4.2 0.00015 41.3 4.7 38 113-150 356-393 (444)
69 2qmw_A PDT, prephenate dehydra 68.4 16 0.00055 34.4 8.3 50 115-164 185-238 (267)
70 3mah_A Aspartokinase; aspartat 67.0 2.9 0.0001 35.9 2.6 109 250-376 17-134 (157)
71 1phz_A Protein (phenylalanine 59.9 8.9 0.00031 38.6 4.9 50 329-379 34-84 (429)
72 1ib8_A Conserved protein SP14. 59.2 40 0.0014 29.1 8.6 89 266-364 16-111 (164)
73 3g12_A Putative lactoylglutath 40.0 91 0.0031 24.6 7.4 49 26-81 66-115 (128)
74 1phz_A Protein (phenylalanine 39.3 23 0.0008 35.5 4.2 52 113-164 31-83 (429)
75 3dhx_A Methionine import ATP-b 36.4 60 0.002 25.6 5.5 67 1-75 4-71 (106)
76 3g12_A Putative lactoylglutath 35.8 89 0.003 24.7 6.7 49 250-305 66-115 (128)
77 1tdj_A Biosynthetic threonine 32.7 1.5E+02 0.0051 30.4 9.1 129 28-164 339-483 (514)
78 1zvp_A Hypothetical protein VC 23.8 92 0.0031 25.9 4.6 46 114-164 69-117 (133)
79 1zhv_A Hypothetical protein AT 23.5 57 0.002 27.2 3.3 45 115-164 61-108 (134)
80 1tdj_A Biosynthetic threonine 21.4 2E+02 0.0069 29.4 7.6 111 251-368 338-471 (514)
81 3v69_A Protein filia; RNA-bind 21.2 72 0.0025 26.8 3.4 36 2-37 74-109 (140)
82 1zhv_A Hypothetical protein AT 21.2 83 0.0028 26.2 3.9 33 338-375 74-106 (134)
83 2qsw_A Methionine import ATP-b 20.8 2.2E+02 0.0075 21.8 6.2 52 340-396 37-88 (100)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.77 E-value=2.4e-18 Score=159.07 Aligned_cols=143 Identities=13% Similarity=0.104 Sum_probs=113.5
Q ss_pred CeEEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh-----
Q 013535 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER----- 324 (441)
Q Consensus 250 ~~t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~----- 324 (441)
..++|+|+|+|||||+++++++|+++|+||.+|++++..|.+.-.|.|..... ....+++.|++.|...+..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAK---DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSS---SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCc---cchhHHHHHHHHHHHHHHhcCCeE
Confidence 35789999999999999999999999999999999998775554788765421 2223577777777644321
Q ss_pred --------hcCCceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEeeC--CeeEEEEEEEcCCCCCCChHHHHHHHHH
Q 013535 325 --------RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG--GKVKDTFYVTDVTGNPVDPKIIDSIRRQ 394 (441)
Q Consensus 325 --------r~~~~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~g--~~~~d~F~v~d~~g~~~~~~~~~~l~~~ 394 (441)
.....++|+|.++|||||+++|+++|+++|+||..++..|.+ +++.+.||++...+.| .+.. ++|+++
T Consensus 81 ~~~~~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~-~~l~~~ 158 (195)
T 2nyi_A 81 SVAERHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY-QEVVTA 158 (195)
T ss_dssp CC----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH-HHHHHH
T ss_pred EEEeCCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc-HHHHHH
Confidence 012368999999999999999999999999999999999998 7789999998765544 2334 777777
Q ss_pred hcc
Q 013535 395 IGH 397 (441)
Q Consensus 395 l~~ 397 (441)
|..
T Consensus 159 l~~ 161 (195)
T 2nyi_A 159 LSR 161 (195)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.75 E-value=1.9e-17 Score=152.91 Aligned_cols=156 Identities=19% Similarity=0.185 Sum_probs=112.9
Q ss_pred CeEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCC---CCC
Q 013535 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS---FAP 102 (441)
Q Consensus 26 ~~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~---~~~ 102 (441)
..++|+|+|+||||||++||++|+++|+||++|++++..|.+.-.|.|..+.. ......+.|++.|..... +..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAK---DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSS---SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCc---cchhHHHHHHHHHHHHHHhcCCeE
Confidence 35799999999999999999999999999999999985555444788864421 112345677777764321 110
Q ss_pred CcceeeeecCCCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeC--CeEEEEEEEEeCCCCCCCCCHHHHHHH
Q 013535 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTDHSTGYAIKDPKRLSTI 180 (441)
Q Consensus 103 ~~~~~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~--~~~~dvF~V~~~~~g~~~~~~~~~~~l 180 (441)
.....-. ......++|+|.|+||||+++.|+++|+++|+||.+++..|.+ ++..+.|++... .+.+ ++.. +.|
T Consensus 81 ~~~~~~~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~-~~~~--~~~~-~~l 155 (195)
T 2nyi_A 81 SVAERHV-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSR-VAFP--FPLY-QEV 155 (195)
T ss_dssp CC----C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEE-EEEE--GGGH-HHH
T ss_pred EEEeCCc-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEE-EEcC--CCcc-HHH
Confidence 0000001 3345679999999999999999999999999999999999977 556788888762 3222 2345 788
Q ss_pred HHHHHHhhc
Q 013535 181 KELLFNVLR 189 (441)
Q Consensus 181 ~~~L~~~L~ 189 (441)
++.|.....
T Consensus 156 ~~~l~~~a~ 164 (195)
T 2nyi_A 156 VTALSRVEE 164 (195)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888876554
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.71 E-value=1.4e-16 Score=146.52 Aligned_cols=139 Identities=17% Similarity=0.197 Sum_probs=109.5
Q ss_pred eEEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh------
Q 013535 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER------ 324 (441)
Q Consensus 251 ~t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~------ 324 (441)
..+|+|+|+||||++++++++|+++|+||.++++.+..|.+.-.|.|..+ ....+.|++.|.+....
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~-------~~~~~~l~~~L~~~~~~~~~~~~ 78 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS-------PSNITRVETTLPLLGQQHDLITM 78 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC-------HHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC-------CCCHHHHHHHHHHHHHhcCCEEE
Confidence 46899999999999999999999999999999999988877668887642 13677888888765421
Q ss_pred --hc--------CCceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEeeCC----eeEEEEEEEcCCCCCCChHHHHH
Q 013535 325 --RA--------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGG----KVKDTFYVTDVTGNPVDPKIIDS 390 (441)
Q Consensus 325 --r~--------~~~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~g~----~~~d~F~v~d~~g~~~~~~~~~~ 390 (441)
+. ...++|+|.++||||++++|+++|+++|+||.+++..|.++ ++.+.||++...+.| ++...++
T Consensus 79 ~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~~~~~ 157 (192)
T 1u8s_A 79 MKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGCNLMQ 157 (192)
T ss_dssp EEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTSCHHH
T ss_pred EEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCCCHHH
Confidence 11 12579999999999999999999999999999999999985 689999998764443 2234567
Q ss_pred HHHHhcc
Q 013535 391 IRRQIGH 397 (441)
Q Consensus 391 l~~~l~~ 397 (441)
|+++|..
T Consensus 158 l~~~l~~ 164 (192)
T 1u8s_A 158 LQEEFDA 164 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777764
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.67 E-value=1.5e-15 Score=139.75 Aligned_cols=156 Identities=12% Similarity=0.093 Sum_probs=106.7
Q ss_pred eEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCCCcce
Q 013535 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS 106 (441)
Q Consensus 27 ~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~~~~~ 106 (441)
..+|+|+|+||||+|++++++|+++|+||+++++++.+|.+.-.|.|..+. . ..+++.+.|.+.+.. ..+.....+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~-~--~~~~l~~~L~~~~~~-~~~~~~~~~ 81 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP-S--NITRVETTLPLLGQQ-HDLITMMKR 81 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH-H--HHHHHHHHHHHHHHH-HTCEEEEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC-C--CHHHHHHHHHHHHHh-cCCEEEEEe
Confidence 478999999999999999999999999999999998767666688886432 0 112233444433311 111000000
Q ss_pred e--eeecCCCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeCC----eEEEEEEEEeCCCCCCCCCHHHHHHH
Q 013535 107 S--VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND----RAAAVVHVTDHSTGYAIKDPKRLSTI 180 (441)
Q Consensus 107 ~--v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~----~~~dvF~V~~~~~g~~~~~~~~~~~l 180 (441)
. -........+.|+|.++||||++++|+.+|+++|+||.+++..|.+. +..+.|++... .+.+ ++...+.|
T Consensus 82 ~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~-~~~~--~~~~~~~l 158 (192)
T 1u8s_A 82 TSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAIS-ARVD--SGCNLMQL 158 (192)
T ss_dssp ECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEE-EEEC--TTSCHHHH
T ss_pred CCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEE-EeCC--CCCCHHHH
Confidence 0 00133446789999999999999999999999999999999999874 56788887662 2221 22245788
Q ss_pred HHHHHHhhc
Q 013535 181 KELLFNVLR 189 (441)
Q Consensus 181 ~~~L~~~L~ 189 (441)
+++|.....
T Consensus 159 ~~~l~~~~~ 167 (192)
T 1u8s_A 159 QEEFDALCT 167 (192)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888876554
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.95 E-value=1.8e-08 Score=102.78 Aligned_cols=150 Identities=12% Similarity=0.045 Sum_probs=101.8
Q ss_pred CeEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCCCcc
Q 013535 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR 105 (441)
Q Consensus 26 ~~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~~~~ 105 (441)
....|+|.|+||||+.+.++++|+++|+||++++.+..+|++.-...+..+... .+.+.+.+.+.. +.....+ .
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-~~~~~l~~~l~~-~~~~~~~----~ 84 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-ADGPALRHDVEA-AIRKVGL----D 84 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-HTSHHHHHHHHH-HHHHTTC----E
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-CCHHHHHHHHHH-HHHHcCe----E
Confidence 357899999999999999999999999999999999888887766666433211 111233344432 2222221 1
Q ss_pred eeeee------cCCCCeEEEEEEeCC-CcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHH
Q 013535 106 SSVGV------MPTEEHTSIEFTGTD-RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178 (441)
Q Consensus 106 ~~v~~------~~~~~~t~i~v~~~D-rpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~V~~~~~g~~~~~~~~~~ 178 (441)
..+.. .....+..+++.++| ++|++.+|+.+|+++|+||.+.+..+......-.|++..+ + .+ .+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~~----~-~~---~~ 156 (415)
T 3p96_A 85 VSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSVP----P-GA---DE 156 (415)
T ss_dssp EEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEECC----T-TC---HH
T ss_pred EEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeCC----C-CC---HH
Confidence 11111 134578899999999 9999999999999999999998887743334444666442 1 12 35
Q ss_pred HHHHHHHHhhc
Q 013535 179 TIKELLFNVLR 189 (441)
Q Consensus 179 ~l~~~L~~~L~ 189 (441)
.++..|.+.+.
T Consensus 157 ~l~~~l~~l~~ 167 (415)
T 3p96_A 157 ALRTALNRVSS 167 (415)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 56666665544
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.76 E-value=1.3e-07 Score=96.33 Aligned_cols=122 Identities=12% Similarity=0.045 Sum_probs=90.6
Q ss_pred CeEEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHh------
Q 013535 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE------ 323 (441)
Q Consensus 250 ~~t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~------ 323 (441)
...+|+|.|+||||+.+.+++.|+++|+||.+++.++.+|++.-...+.-+... ...+.|++.|...-.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-----ADGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-----HTSHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-----CCHHHHHHHHHHHHHHcCeEE
Confidence 356899999999999999999999999999999999988876655554321110 023567777754311
Q ss_pred --hh------c--CCceEEEEEeCC-ccchHHHHHHHHHHCCceEEEEEEEeeCCeeEEEEEEE
Q 013535 324 --RR------A--SEGLELELCTED-RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 376 (441)
Q Consensus 324 --~r------~--~~~~~ieV~~~D-rpGLL~~It~~l~~~~v~I~~A~i~T~g~~~~d~F~v~ 376 (441)
.+ . ...+.+++.+.| +||++.+|+.+|+++|+||...+.-+......-.|++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~ 149 (415)
T 3p96_A 86 SIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVS 149 (415)
T ss_dssp EEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEE
T ss_pred EEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEee
Confidence 00 1 126899999999 99999999999999999999988777433333336664
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.54 E-value=2.1e-06 Score=74.48 Aligned_cols=112 Identities=5% Similarity=-0.000 Sum_probs=75.8
Q ss_pred EEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhhcCCceE
Q 013535 252 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 331 (441)
Q Consensus 252 t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~r~~~~~~ 331 (441)
..++|..+|+||.++++++.|++.|+||..-.+....+...-.|.+. +. ++.++.|++. ........+
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~--------d~---~~a~~~L~~~-G~~v~~~sv 74 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS--------DP---DKAYKALKDN-HFAVNITDV 74 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES--------CH---HHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC--------CH---HHHHHHHHHc-CCeEeeeeE
Confidence 46889999999999999999999999999877654433222223321 11 2333334321 000111246
Q ss_pred EEEEeCCccchHHHHHHHHHHCCceEEEEEEEeeCCeeEEEEEE
Q 013535 332 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 375 (441)
Q Consensus 332 ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~~~d~F~v 375 (441)
+-+..+|+||.+++++++|++.|+||.+......+.+..-.|..
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe
Confidence 77788899999999999999999999887755344555555544
No 8
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.44 E-value=5e-06 Score=72.12 Aligned_cols=110 Identities=18% Similarity=0.180 Sum_probs=74.4
Q ss_pred EEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEe-cCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCCCcce
Q 013535 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS 106 (441)
Q Consensus 28 ~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t-~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~~~~~ 106 (441)
.+|+|..+|+||.++++++.|++.|+||..-.+.. .+.. +-.|.+.+. +...+.|+ ... +. .
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~-~~~~~~~d~-------~~a~~~L~----~~G-~~----v 69 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFG-ILRGIVSDP-------DKAYKALK----DNH-FA----V 69 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCE-EEEEEESCH-------HHHHHHHH----HTT-CC----E
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCC-EEEEEeCCH-------HHHHHHHH----HcC-Ce----E
Confidence 58899999999999999999999999999877753 3311 222443111 22333333 221 10 0
Q ss_pred eeeecCCCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEE
Q 013535 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161 (441)
Q Consensus 107 ~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~ 161 (441)
....++.+..+|+||.+++++++|+++|+||.....+..++...-+|.
T Consensus 70 -------~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~ 117 (144)
T 2f06_A 70 -------NITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIR 117 (144)
T ss_dssp -------EEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEE
T ss_pred -------eeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEE
Confidence 012467778899999999999999999999988776533444444443
No 9
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=98.14 E-value=0.0046 Score=65.91 Aligned_cols=266 Identities=12% Similarity=0.116 Sum_probs=157.9
Q ss_pred EEEEE-ccCCCcHHHHHHHHHHhCCceEEEEEEEe-cCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCC-C-Cc
Q 013535 29 VIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA-P-SL 104 (441)
Q Consensus 29 ~v~V~-~~DrpGLf~~i~~~L~~~glnI~~A~i~t-~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~-~-~~ 104 (441)
.|++. .++.||..+++.+.|+++|+||.-...+. .+|..-..|.|...+- ++..+.|++ +....... + ..
T Consensus 272 ~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~~~-----~~a~~~l~~-~~~el~~~~~~~~ 345 (600)
T 3l76_A 272 KVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLL-----NTAEAVTSA-IAPALRSYPEADQ 345 (600)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGGGH-----HHHHHHHHH-HGGGGSSSTTCSS
T ss_pred EEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHHHH-----HHHHHHHHH-HHHHhhccccccC
Confidence 34444 47899999999999999999995333322 4566666687744321 122222332 33222100 0 01
Q ss_pred ceeeeecCCCCeEEEEEEeC---CCcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHH
Q 013535 105 RSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181 (441)
Q Consensus 105 ~~~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~V~~~~~g~~~~~~~~~~~l~ 181 (441)
..++.. ..+...|.|+|. .+||+.+++..+|++.|+||.... |. ...-.|.|.. +..++..
T Consensus 346 ~~~v~~--~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~~Is~vI~~----------~d~~~Av 409 (600)
T 3l76_A 346 EAEIIV--EKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EVKVSCVIDQ----------RDADRAI 409 (600)
T ss_dssp SSEEEE--ECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEG----------GGHHHHH
T ss_pred cceeEe--cCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CCEEEEEEcH----------HHHHHHH
Confidence 112222 457889999985 799999999999999999997765 32 2234454443 1234555
Q ss_pred HHHHHhhcCCCcccccccccCCCCcccccccchhcccccchhhhhhhhccccCCCCCCCEEEEEcCCCCeEEEEE-EecC
Q 013535 182 ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITM-RSKD 260 (441)
Q Consensus 182 ~~L~~~L~~~~~~~~~~~~l~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~t~I~V-~~~D 260 (441)
+.|++.+..... . .. .+ ....+. ..-.-|..+ .+...|++ -.+|
T Consensus 410 ~aLh~~f~~~~t-~-----~~--------~~-------~~~~~~-----------~~v~Gia~~---~~~a~i~i~~~~~ 454 (600)
T 3l76_A 410 AALSNAFGVTLS-P-----PK--------NQ-------TDTSHL-----------PAVRGVALD---QDQAQIAIRHVPD 454 (600)
T ss_dssp HHHHHHTTCCBC-C-----CC--------CC-------CC---C-----------CSCCEEEEE---CSEEEEEEEEEES
T ss_pred HHHHHhhcccCC-C-----cc--------cc-------cccccc-----------CceEEEEee---CCEEEEEEecCCC
Confidence 666665543210 0 00 00 000010 011233333 35566666 4699
Q ss_pred CcchHHHHHHHHHhCCceEEEEEEEec----CC--eEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhhc--------
Q 013535 261 RPKLLFDIVCTLTDMQYVVFHGMVNTG----RT--EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA-------- 326 (441)
Q Consensus 261 rpGLl~~i~~~L~~~glnI~~A~i~t~----~~--~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~r~-------- 326 (441)
+||+.+++...|++.|+||.--..... .| ..--+|.|.. ..+++..+.|++. ....
T Consensus 455 ~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~---------~d~~~a~~~l~~~-~~~~~~~~v~~~ 524 (600)
T 3l76_A 455 RPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE---------GDSSQAEAILQPL-IKDWLDAAIVVN 524 (600)
T ss_dssp STTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH---------HHHHHHHHHHHHH-TTTSTTCEEEEE
T ss_pred CccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH---------HHHHHHHHHHHHH-HHhcCCceEEEe
Confidence 999999999999999999954333222 13 2333466643 3444445555442 2111
Q ss_pred CCceEEEEEe---CCccchHHHHHHHHHHCCceEEEEE
Q 013535 327 SEGLELELCT---EDRVGLLSDITRIFRENSLSIKRAE 361 (441)
Q Consensus 327 ~~~~~ieV~~---~DrpGLL~~It~~l~~~~v~I~~A~ 361 (441)
+.-..|.|.+ ..+||+.+++.++|++.||||....
T Consensus 525 ~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 525 KAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp CCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred CCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 2245777876 5999999999999999999998766
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.09 E-value=2e-05 Score=62.48 Aligned_cols=67 Identities=13% Similarity=0.201 Sum_probs=53.4
Q ss_pred CeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHhh
Q 013535 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188 (441)
Q Consensus 115 ~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~V~~~~~g~~~~~~~~~~~l~~~L~~~L 188 (441)
....|+|.++||||++++|+++|+++|+||.+....+..+.+...+.+.-+ + ...+++|.+.|.+..
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~-----~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--E-----KQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--S-----CCCHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--C-----CCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999877777777766442 1 123577888877643
No 11
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.07 E-value=2.7e-05 Score=61.71 Aligned_cols=50 Identities=20% Similarity=0.200 Sum_probs=43.7
Q ss_pred eEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcC
Q 013535 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76 (441)
Q Consensus 27 ~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~~ 76 (441)
...|+|.++||||++++++++|+++|+||.+....+.+|.+.-.+.+.-+
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~ 54 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD 54 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC
Confidence 46899999999999999999999999999999998866887777777443
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.88 E-value=5.5e-05 Score=59.25 Aligned_cols=64 Identities=11% Similarity=0.214 Sum_probs=50.1
Q ss_pred ceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEeeCCeeEEEEEEEcCCCCCCChHHHHHHHHHhcc
Q 013535 329 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 397 (441)
Q Consensus 329 ~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~~~d~F~v~d~~g~~~~~~~~~~l~~~l~~ 397 (441)
.+.|.|.+.||||+|++|+++|++.|+||.++.+.+.++.+...|.+.-. +...++++.++|.+
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-----~~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-----NTDKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-----SHHHHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-----CHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999998876655555555322 24566777777765
No 13
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.83 E-value=0.00063 Score=65.88 Aligned_cols=117 Identities=10% Similarity=0.054 Sum_probs=74.5
Q ss_pred eEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCCCc
Q 013535 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL 104 (441)
Q Consensus 27 ~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t--~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~~~ 104 (441)
...|++.|+||||+.+++++.|+++|+||.+.+.++ ..|+|+-...+.-+++ ..+.+++.+.+. .+..... +
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~-~~~~~~L~~~f~-~la~~~~----m 79 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK-VIPLASLRTGFG-VIAAKFT----M 79 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC-CCCHHHHHHHHH-HHHHHTT----C
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC-CCCHHHHHHHHH-HHHHHcC----C
Confidence 468999999999999999999999999999999985 5688776666643332 122233444443 2333222 1
Q ss_pred ceeeeecCCCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEe
Q 013535 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (441)
Q Consensus 105 ~~~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T 151 (441)
...+.. ......|-|....+-.-|.++-.....-.+++.-+-+.+
T Consensus 80 ~~~l~~--~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 80 GWHMRD--RETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp EEEEEE--TTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred EEEeec--cCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 222222 223344555555555677777777777777766555555
No 14
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.80 E-value=0.00011 Score=57.54 Aligned_cols=64 Identities=14% Similarity=0.268 Sum_probs=49.1
Q ss_pred CeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHH
Q 013535 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 185 (441)
Q Consensus 115 ~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~V~~~~~g~~~~~~~~~~~l~~~L~ 185 (441)
-.+.|.|.+.||||+|++|+.+|++.|+||.+..+.+.++.+...|.+.-. +.+.++++.+.|.
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-------~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-------NTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-------SHHHHHHHHHHHT
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-------CHHHHHHHHHHHh
Confidence 357789999999999999999999999999999998866555556655441 3455566666553
No 15
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.78 E-value=0.00036 Score=68.00 Aligned_cols=118 Identities=12% Similarity=0.102 Sum_probs=69.0
Q ss_pred CeEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEec--CCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCCC
Q 013535 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPS 103 (441)
Q Consensus 26 ~~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t~--~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~~ 103 (441)
....|++.|+||||++++|++.|+++|+||++++.+++ .|+|+-...+..+.+ ..+.+++.+.+.. +.....
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~-~~~~~~L~~~l~~-la~~l~---- 94 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL-PFDLDGFREAFTP-IAEEFS---- 94 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS-SSCHHHHHHHHHH-HHHHHT----
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC-CCCHHHHHHHHHH-HHHHhC----
Confidence 34689999999999999999999999999999999974 688776665543322 1222334344432 222221
Q ss_pred cceeeeecCCCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEe
Q 013535 104 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (441)
Q Consensus 104 ~~~~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T 151 (441)
+...+..........|.+.+. -.-|.++......-.++..-+-+.+
T Consensus 95 m~~~l~~~~~~~ri~vl~Sg~--g~nl~~ll~~~~~g~l~~~I~~Vis 140 (302)
T 3o1l_A 95 MDWRITDSAQKKRVVLMASRE--SHCLADLLHRWHSDELDCDIACVIS 140 (302)
T ss_dssp CEEEEEETTSCCEEEEEECSC--CHHHHHHHHHHHTTCSCSEEEEEEE
T ss_pred CeeeecccCCCcEEEEEEeCC--chhHHHHHHHHHCCCCCcEEEEEEE
Confidence 112222222223333333333 3456666666655555544444444
No 16
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.76 E-value=0.00086 Score=64.88 Aligned_cols=116 Identities=7% Similarity=-0.010 Sum_probs=67.8
Q ss_pred eEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCCCc
Q 013535 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL 104 (441)
Q Consensus 27 ~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t--~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~~~ 104 (441)
...|+|.|+||||+++++++.|+++|+||.+.+.++ ..|+++-...+..+.+ .+.+++.+.+. .+..... .
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~--~~~~~L~~~f~-~la~~l~----m 80 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDD--FDEAGFRAGLA-ERSEAFG----M 80 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSS--CCHHHHHHHHH-HHHGGGT----C
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCCC--CCHHHHHHHHH-HHHHHcC----C
Confidence 468999999999999999999999999999999996 5687775555543321 22233444443 2333322 1
Q ss_pred ceeeeecCCCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEe
Q 013535 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (441)
Q Consensus 105 ~~~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T 151 (441)
...+..........|.+.+ +-.-|.++......-.++..-+-+.+
T Consensus 81 ~~~l~~~~~~~ri~vl~Sg--~g~~l~~ll~~~~~g~l~~~i~~Vis 125 (286)
T 3n0v_A 81 AFELTAPNHRPKVVIMVSK--ADHCLNDLLYRQRIGQLGMDVVAVVS 125 (286)
T ss_dssp EEEEECTTCCCEEEEEESS--CCHHHHHHHHHHHTTSSCCEEEEEEE
T ss_pred EEEeecCCCCcEEEEEEeC--CCCCHHHHHHHHHCCCCCcEEEEEEe
Confidence 1222221112223333333 33456666665555555544444444
No 17
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.74 E-value=0.0011 Score=64.05 Aligned_cols=117 Identities=10% Similarity=-0.009 Sum_probs=71.6
Q ss_pred CeEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCCC
Q 013535 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPS 103 (441)
Q Consensus 26 ~~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t--~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~~ 103 (441)
....|++.|+||||+++++++.|+++|+||++++.++ ..|+|+-...+..+ +... .++.+.+.. +.....
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~-~~~~--~~L~~~f~~-la~~~~---- 77 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIP-VAGV--NDFNSAFGK-VVEKYN---- 77 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC-C-----CHHHHHHHH-HHGGGT----
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcC-CCCH--HHHHHHHHH-HHHHcC----
Confidence 4578999999999999999999999999999999985 56877755555332 2111 234344432 333221
Q ss_pred cceeeeecCCCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEee
Q 013535 104 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152 (441)
Q Consensus 104 ~~~~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~ 152 (441)
+...+..........|.+.+. -.-|.++-.....-.+++.-+-+.+.
T Consensus 78 m~~~l~~~~~~~ri~vl~Sg~--g~nl~~ll~~~~~g~l~~~i~~Visn 124 (287)
T 3nrb_A 78 AEWWFRPRTDRKKVVIMVSKF--DHCLGDLLYRHRLGELDMEVVGIISN 124 (287)
T ss_dssp CEEEEEETTCCCEEEEEECSC--CHHHHHHHHHHHHTSSCCEEEEEEES
T ss_pred CeeEeeccCCCcEEEEEEeCC--CcCHHHHHHHHHCCCCCeEEEEEEeC
Confidence 222233222233344444443 45777777777766666555555553
No 18
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.69 E-value=0.0012 Score=64.00 Aligned_cols=119 Identities=8% Similarity=0.042 Sum_probs=69.0
Q ss_pred CeEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcC-CCCCCCchHHHHHHHHHhcccCCCCC
Q 013535 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDC-DGKKIRDKEVIDYIQQRLETDASFAP 102 (441)
Q Consensus 26 ~~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t--~~g~~~d~f~V~~~-~g~~~~~~~~~~~L~~~L~~~~~~~~ 102 (441)
....+++.|+||||++++|++.|+++|+||.+++.++ ..|+|+-...+..+ +....+.+++.+.+.. +.....
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~-la~~~~--- 84 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEP-IAERFR--- 84 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHH-HHHHHT---
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHH-HHHhcC---
Confidence 3468999999999999999999999999999999996 56877755554332 0111222333333332 222221
Q ss_pred CcceeeeecCCCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEe
Q 013535 103 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (441)
Q Consensus 103 ~~~~~v~~~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T 151 (441)
....+..........|.+.+. -.-|.++-.....-.+++.-+-+.+
T Consensus 85 -m~~~l~~~~~~~ri~vl~Sg~--g~~l~~ll~~~~~g~l~~~i~~Vis 130 (292)
T 3lou_A 85 -MQWAIHDVAARPKVLIMVSKL--EHCLADLLFRWKMGELKMDIVGIVS 130 (292)
T ss_dssp -CEEEEEETTSCCEEEEEECSC--CHHHHHHHHHHHHTSSCCEEEEEEE
T ss_pred -cEEEeeccCCCCEEEEEEcCC--CcCHHHHHHHHHcCCCCcEEEEEEe
Confidence 122222222223334444333 3466666666666656555455555
No 19
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.56 E-value=0.00052 Score=60.96 Aligned_cols=110 Identities=16% Similarity=0.221 Sum_probs=76.4
Q ss_pred CCeEEEEEE-ccCCCcHHHHHHHHHHhCCceEEEEEEE-ecCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCC
Q 013535 25 ADATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYIS-SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (441)
Q Consensus 25 ~~~~~v~V~-~~DrpGLf~~i~~~L~~~glnI~~A~i~-t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~ 102 (441)
.+...|+|. .+|+||..+++.+.|+++|+||.-.... +.+|..--.|.|...+. ++..+.|++ +......
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~~-----~~a~~~l~~-~~~~l~~-- 94 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDY-----KQTLEILSE-RQDSIGA-- 94 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGGH-----HHHHHHHHH-SSTTTTC--
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechHH-----HHHHHHHHH-HHHHcCC--
Confidence 356888888 5999999999999999999999866553 23465555688743211 223333333 2222211
Q ss_pred CcceeeeecCCCCeEEEEEEeCC---CcchHHHHHHHHHhcCCeEEEE
Q 013535 103 SLRSSVGVMPTEEHTSIEFTGTD---RPGLFSEVCAVLADLHCNVVNA 147 (441)
Q Consensus 103 ~~~~~v~~~~~~~~t~i~v~~~D---rpGLl~~i~~~L~~~g~~I~~A 147 (441)
..+.. ..+...+.|.|.+ +||.++++..+|+++|+||..-
T Consensus 95 ---~~i~~--~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 95 ---ASIDG--DDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp ---SEEEE--ESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred ---ceEEe--cCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 11222 3578899999987 9999999999999999999884
No 20
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.55 E-value=0.00084 Score=59.57 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=72.0
Q ss_pred CCeEEEEEE-ecCCcchHHHHHHHHHhCCceEEEEEEEec-CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHH---h
Q 013535 249 KDYTVITMR-SKDRPKLLFDIVCTLTDMQYVVFHGMVNTG-RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI---E 323 (441)
Q Consensus 249 ~~~t~I~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t~-~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L---~ 323 (441)
.+.+.|+|. .+|+||.++++...|++.|+||..-..... +|...-+|.|... ..++..+.|++.. .
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~---------~~~~a~~~l~~~~~~l~ 93 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG---------DYKQTLEILSERQDSIG 93 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG---------GHHHHHHHHHHSSTTTT
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech---------HHHHHHHHHHHHHHHcC
Confidence 356778888 599999999999999999999987554322 3444455776431 2233334444321 1
Q ss_pred hh----cCCceEEEEEeCC---ccchHHHHHHHHHHCCceEEEE
Q 013535 324 RR----ASEGLELELCTED---RVGLLSDITRIFRENSLSIKRA 360 (441)
Q Consensus 324 ~r----~~~~~~ieV~~~D---rpGLL~~It~~l~~~~v~I~~A 360 (441)
.. ......+.|.+.+ +||+++++.++|++.|+||...
T Consensus 94 ~~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 94 AASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp CSEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred CceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 10 1225689999887 9999999999999999999984
No 21
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.44 E-value=0.0043 Score=60.02 Aligned_cols=109 Identities=13% Similarity=0.123 Sum_probs=70.9
Q ss_pred eEEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHh-----
Q 013535 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG--RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE----- 323 (441)
Q Consensus 251 ~t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~--~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~----- 323 (441)
..+++|.|+||||+.+++++.|+++|+||.+++.++. .|++.-...+.-+.+. . ..+.|++.|...-.
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-~----~~~~L~~~f~~la~~~~m~ 80 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV-I----PLASLRTGFGVIAAKFTMG 80 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC-C----CHHHHHHHHHHHHHHTTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC-C----CHHHHHHHHHHHHHHcCCE
Confidence 4679999999999999999999999999999998754 4666544444332221 1 34667776654321
Q ss_pred ---hhcCCceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEe
Q 013535 324 ---RRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 364 (441)
Q Consensus 324 ---~r~~~~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T 364 (441)
+...+...|-|-.--+---|.+|-.....-.++++-+-+-+
T Consensus 81 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 81 WHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp EEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred EEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 11122334444444444578888888877777655444433
No 22
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.40 E-value=0.0037 Score=60.85 Aligned_cols=108 Identities=10% Similarity=0.079 Sum_probs=68.1
Q ss_pred CeEEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHH---Hh-
Q 013535 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG--RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA---IE- 323 (441)
Q Consensus 250 ~~t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~--~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~---L~- 323 (441)
...+++|.|+||||+.+++++.|+++|+||.+++.++. .|++.-...+..+.+. . ..+.|++.|... +.
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~-~----~~~~L~~~l~~la~~l~m 95 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLP-F----DLDGFREAFTPIAEEFSM 95 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSS-S----CHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCC-C----CHHHHHHHHHHHHHHhCC
Confidence 34679999999999999999999999999999999875 5666544444332221 1 345666666543 21
Q ss_pred ----hhcCC--ceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEe
Q 013535 324 ----RRASE--GLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 364 (441)
Q Consensus 324 ----~r~~~--~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T 364 (441)
+...+ ...|=+++. ---|.+|......-.++.+-+-+-+
T Consensus 96 ~~~l~~~~~~~ri~vl~Sg~--g~nl~~ll~~~~~g~l~~~I~~Vis 140 (302)
T 3o1l_A 96 DWRITDSAQKKRVVLMASRE--SHCLADLLHRWHSDELDCDIACVIS 140 (302)
T ss_dssp EEEEEETTSCCEEEEEECSC--CHHHHHHHHHHHTTCSCSEEEEEEE
T ss_pred eeeecccCCCcEEEEEEeCC--chhHHHHHHHHHCCCCCcEEEEEEE
Confidence 11112 233334444 3467777777766655544333333
No 23
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.24 E-value=0.0028 Score=56.79 Aligned_cols=114 Identities=13% Similarity=0.179 Sum_probs=76.2
Q ss_pred CCeEEEEE-EecCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh
Q 013535 249 KDYTVITM-RSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 324 (441)
Q Consensus 249 ~~~t~I~V-~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~---~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~ 324 (441)
.+.+.|+| ..+|+||.++++...|++.|+||..-...+. ++..--.|.+.. ...++..+.|++....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~---------~d~~~a~~~l~~~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR---------SDGRRAMEILKKLQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH---------HHHHHHHHHHHTTTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc---------ccHHHHHHHHHHHHHh
Confidence 46677888 4699999999999999999999987655443 223322366643 2333444444432111
Q ss_pred h-------cCCceEEEEEeC---CccchHHHHHHHHHHCCceEEEEEEEeeCCeeEEEEEE
Q 013535 325 R-------ASEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 375 (441)
Q Consensus 325 r-------~~~~~~ieV~~~---DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~~~d~F~v 375 (441)
. ......|.|.+. ++||+++++.++|++.||||.... |.. ..-.|.|
T Consensus 84 ~~~~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is--tSe--~~Is~vV 140 (178)
T 2dtj_A 84 GNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS--TSE--IRISVLI 140 (178)
T ss_dssp TTCSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EET--TEEEEEE
T ss_pred cCCCeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE--cCC--CeEEEEE
Confidence 0 122457788876 899999999999999999999843 332 3335656
No 24
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.23 E-value=0.0066 Score=58.62 Aligned_cols=108 Identities=10% Similarity=0.018 Sum_probs=67.1
Q ss_pred eEEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh----
Q 013535 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG--RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER---- 324 (441)
Q Consensus 251 ~t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~--~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~---- 324 (441)
..+++|.|+||||+.+++++.|+++|+||.+++.++. .|++.-...+..+. . ...+.|++.|...-.+
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~--~----~~~~~L~~~f~~la~~l~m~ 81 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD--D----FDEAGFRAGLAERSEAFGMA 81 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS--S----CCHHHHHHHHHHHHGGGTCE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC--C----CCHHHHHHHHHHHHHHcCCE
Confidence 4679999999999999999999999999999999864 46665444433222 1 1356777777653221
Q ss_pred ----hcCCceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEe
Q 013535 325 ----RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 364 (441)
Q Consensus 325 ----r~~~~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T 364 (441)
...++..|-|-+--+---|.+|......-.++.+-+-+-+
T Consensus 82 ~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis 125 (286)
T 3n0v_A 82 FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVS 125 (286)
T ss_dssp EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEE
T ss_pred EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEe
Confidence 1122223333333333467777777766555544333333
No 25
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.20 E-value=0.0084 Score=58.06 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=66.7
Q ss_pred eEEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEEcc-CCCCCCCHHHHHHHHHHHHHH---Hh-
Q 013535 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG--RTEAYQEFYIRHV-DGLPISSEAERERVIQCLEAA---IE- 323 (441)
Q Consensus 251 ~t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~--~~~~~d~F~V~~~-~g~~i~~~~~~~~l~~~L~~~---L~- 323 (441)
..+++|.|+||||+.+++++.|+++|+||.+++.++. .|++.-...+... .+... ..+.|++.|... +.
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~la~~~~m 85 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEPIAERFRM 85 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHHHHHhcCc
Confidence 4689999999999999999999999999999999863 4665533333221 01011 346677666543 21
Q ss_pred ----hhcCC--ceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEe
Q 013535 324 ----RRASE--GLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 364 (441)
Q Consensus 324 ----~r~~~--~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T 364 (441)
+...+ ...|=+++.+ --|.+|......-.++++-+-+-+
T Consensus 86 ~~~l~~~~~~~ri~vl~Sg~g--~~l~~ll~~~~~g~l~~~i~~Vis 130 (292)
T 3lou_A 86 QWAIHDVAARPKVLIMVSKLE--HCLADLLFRWKMGELKMDIVGIVS 130 (292)
T ss_dssp EEEEEETTSCCEEEEEECSCC--HHHHHHHHHHHHTSSCCEEEEEEE
T ss_pred EEEeeccCCCCEEEEEEcCCC--cCHHHHHHHHHcCCCCcEEEEEEe
Confidence 11122 2334444443 467777777777666544444433
No 26
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.20 E-value=0.0011 Score=58.77 Aligned_cols=109 Identities=13% Similarity=0.153 Sum_probs=75.5
Q ss_pred CCeEEEEEEc-cCCCcHHHHHHHHHHhCCceEEEEEEEec---CCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCC
Q 013535 25 ADATVIKVDS-VNKHGILLQVIQVLNDVNLVIKKAYISSD---GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF 100 (441)
Q Consensus 25 ~~~~~v~V~~-~DrpGLf~~i~~~L~~~glnI~~A~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~ 100 (441)
.+...|+|.+ +|+||..+++.++|++.|+||.-...... .|..--.|.|...+. ++..+.|++ +.....+
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~-----~~a~~~L~~-~~~~~~~ 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA-----QEALEALEP-VLAEIGG 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH-----HHHHHHHHH-HHHHHCC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH-----HHHHHHHHH-HHHHhCC
Confidence 4567788875 89999999999999999999986544322 355555688854321 223333333 2222211
Q ss_pred CCCcceeeeecCCCCeEEEEEEeCC---CcchHHHHHHHHHhcCCeEEEE
Q 013535 101 APSLRSSVGVMPTEEHTSIEFTGTD---RPGLFSEVCAVLADLHCNVVNA 147 (441)
Q Consensus 101 ~~~~~~~v~~~~~~~~t~i~v~~~D---rpGLl~~i~~~L~~~g~~I~~A 147 (441)
.+.. ..+...+.|+|.+ +||.++++..+|++.|+||...
T Consensus 88 ------~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 88 ------EAIL--RPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp ------EEEE--ECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred ------cEEE--eCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 1222 3578889999976 9999999999999999999544
No 27
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.05 E-value=0.015 Score=56.23 Aligned_cols=108 Identities=9% Similarity=0.113 Sum_probs=67.3
Q ss_pred CeEEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh---
Q 013535 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG--RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER--- 324 (441)
Q Consensus 250 ~~t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~--~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~--- 324 (441)
...+++|.|+||||+.+++++.|+++|+||.+++.++. .|++.-...+..+ + . ..+.|++.|...-.+
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~-~--~----~~~~L~~~f~~la~~~~m 78 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIP-V--A----GVNDFNSAFGKVVEKYNA 78 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC-C---------CHHHHHHHHHHGGGTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcC-C--C----CHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999999999999999999753 4666543333221 1 1 233666666543211
Q ss_pred -----hcCCceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEe
Q 013535 325 -----RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 364 (441)
Q Consensus 325 -----r~~~~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T 364 (441)
...+...|-|-.--+---|.+|......-.++++-+-+-+
T Consensus 79 ~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 123 (287)
T 3nrb_A 79 EWWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIIS 123 (287)
T ss_dssp EEEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEE
T ss_pred eeEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEe
Confidence 1122333333333334578888888877666554444433
No 28
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.05 E-value=0.0019 Score=57.24 Aligned_cols=63 Identities=14% Similarity=0.217 Sum_probs=50.8
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeC--CeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 013535 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (441)
Q Consensus 116 ~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~--~~~~dvF~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (441)
...|.|...|+||+|++|+++|+++|+||.+..+.+.. +...-+|.+.. +...++++.+.|.+
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~--------d~~~leqI~kqL~K 67 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG--------DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES--------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec--------cHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999987643 45556666643 25677888888876
No 29
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.03 E-value=0.0018 Score=58.08 Aligned_cols=110 Identities=18% Similarity=0.331 Sum_probs=73.7
Q ss_pred CCeEEEEE-EccCCCcHHHHHHHHHHhCCceEEEEEEEec---CCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCC
Q 013535 25 ADATVIKV-DSVNKHGILLQVIQVLNDVNLVIKKAYISSD---GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF 100 (441)
Q Consensus 25 ~~~~~v~V-~~~DrpGLf~~i~~~L~~~glnI~~A~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~ 100 (441)
.+...|+| ..+|+||..+++...|++.|+||.-....+. +|..-..|.+...+. ++..+.|++ +......
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~d~-----~~a~~~l~~-~~~~~~~ 86 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDG-----RRAMEILKK-LQVQGNW 86 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHHHH-----HHHHHHHHT-TTTTTTC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccccH-----HHHHHHHHH-HHHhcCC
Confidence 35678888 4799999999999999999999986555432 333333477743211 122222222 2222211
Q ss_pred CCCcceeeeecCCCCeEEEEEEeC---CCcchHHHHHHHHHhcCCeEEEE
Q 013535 101 APSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNA 147 (441)
Q Consensus 101 ~~~~~~~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~g~~I~~A 147 (441)
..+.. ..+...|.|.|. ++||.++++..+|++.|+||..-
T Consensus 87 -----~~v~~--~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~i 129 (178)
T 2dtj_A 87 -----TNVLY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 129 (178)
T ss_dssp -----SEEEE--ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred -----CeEEE--eCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 11222 357788888886 89999999999999999999884
No 30
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.98 E-value=0.0052 Score=54.31 Aligned_cols=115 Identities=10% Similarity=0.109 Sum_probs=74.8
Q ss_pred CCeEEEEEEe-cCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHH---H
Q 013535 249 KDYTVITMRS-KDRPKLLFDIVCTLTDMQYVVFHGMVNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLEA---A 321 (441)
Q Consensus 249 ~~~t~I~V~~-~DrpGLl~~i~~~L~~~glnI~~A~i~t~---~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~---~ 321 (441)
.+.+.|+|.+ +|+||.++++..+|++.|+||..-..... .|...-+|.|... ..++..+.|.+ .
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~---------d~~~a~~~L~~~~~~ 84 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD---------FAQEALEALEPVLAE 84 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG---------GHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH---------HHHHHHHHHHHHHHH
Confidence 3567777766 89999999999999999999986443222 2344455777542 11222233332 2
Q ss_pred Hhhh---cCCceEEEEEeCC---ccchHHHHHHHHHHCCceEEEEEEEeeCCeeEEEEEEE
Q 013535 322 IERR---ASEGLELELCTED---RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 376 (441)
Q Consensus 322 L~~r---~~~~~~ieV~~~D---rpGLL~~It~~l~~~~v~I~~A~i~T~g~~~~d~F~v~ 376 (441)
+.-. .+....+.|.+.+ +||+++++.++|++.||||.... |. +. .=+|.|.
T Consensus 85 ~~~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is--~S-e~-~is~vv~ 141 (167)
T 2dt9_A 85 IGGEAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA--TS-EV-RISVIIP 141 (167)
T ss_dssp HCCEEEEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE--EC-SS-EEEEEEE
T ss_pred hCCcEEEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE--cc-CC-EEEEEEe
Confidence 2210 1224568888886 99999999999999999995543 33 32 4455553
No 31
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.93 E-value=0.0032 Score=55.79 Aligned_cols=63 Identities=11% Similarity=0.137 Sum_probs=50.8
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeC--CeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 013535 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (441)
Q Consensus 116 ~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~--~~~~dvF~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (441)
...|.|...|+||+|++|+++|+++|+||.+..+.+.. +...-+|.+.. ++..+++|.+.|.+
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~K 68 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999987543 55666666654 25677888888776
No 32
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.84 E-value=0.24 Score=52.56 Aligned_cols=196 Identities=15% Similarity=0.159 Sum_probs=122.1
Q ss_pred EEEEeeCCCCCeEEEEEEcc---CCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCchHHHHHHHH
Q 013535 16 RVVIDNNTCADATVIKVDSV---NKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92 (441)
Q Consensus 16 ~V~v~~~~~~~~~~v~V~~~---DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~ 92 (441)
.|.++ .+...|.|.+. ++||+.+++..+|++.|+||.-.. +. .. -.+|.|...+. ++..+.|.+
T Consensus 348 ~v~~~----~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~-~Is~vI~~~d~-----~~Av~aLh~ 414 (600)
T 3l76_A 348 EIIVE----KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EV-KVSCVIDQRDA-----DRAIAALSN 414 (600)
T ss_dssp EEEEE----CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SS-EEEEEEEGGGH-----HHHHHHHHH
T ss_pred eeEec----CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CC-EEEEEEcHHHH-----HHHHHHHHH
Confidence 55553 45778899875 789999999999999999997554 32 22 22466644322 345677777
Q ss_pred HhcccCCCCCC-----cceee-eecCCCCeEEEEEEe-CCCcchHHHHHHHHHhcCCeEEEEEEEee----CC--eEEEE
Q 013535 93 RLETDASFAPS-----LRSSV-GVMPTEEHTSIEFTG-TDRPGLFSEVCAVLADLHCNVVNAEIWTH----ND--RAAAV 159 (441)
Q Consensus 93 ~L~~~~~~~~~-----~~~~v-~~~~~~~~t~i~v~~-~DrpGLl~~i~~~L~~~g~~I~~A~i~T~----~~--~~~dv 159 (441)
.+......+.. ....| ....+.+...|+|.. +|+||+.++|-..|+++|+||.--..... .+ ...-.
T Consensus 415 ~f~~~~t~~~~~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~is 494 (600)
T 3l76_A 415 AFGVTLSPPKNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIA 494 (600)
T ss_dssp HTTCCBCCCCCCCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEE
T ss_pred hhcccCCCccccccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEE
Confidence 77553211000 00111 123355777787765 89999999999999999999965444332 13 23445
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHHhhcCCCcccccccccCCCCcccccccchhcccccchhhhhhhhccccCCCCCC
Q 013535 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 239 (441)
Q Consensus 160 F~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~~~~~~~~~l~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (441)
|.|.. +.+++..+.|.+ +..+.. .
T Consensus 495 ftv~~----------~d~~~a~~~l~~-~~~~~~---------------------------------------------~ 518 (600)
T 3l76_A 495 FMVAE----------GDSSQAEAILQP-LIKDWL---------------------------------------------D 518 (600)
T ss_dssp EEEEH----------HHHHHHHHHHHH-HTTTST---------------------------------------------T
T ss_pred EEEeH----------HHHHHHHHHHHH-HHHhcC---------------------------------------------C
Confidence 66544 223334344433 222110 0
Q ss_pred CEEEEEcCCCCeEEEEEEe---cCCcchHHHHHHHHHhCCceEEEEE
Q 013535 240 PQVTVLNIEKDYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGM 283 (441)
Q Consensus 240 ~~V~v~~~~~~~t~I~V~~---~DrpGLl~~i~~~L~~~glnI~~A~ 283 (441)
-.|.++ ++...|.+.+ +..||.-+++..+|++.|+||..-.
T Consensus 519 ~~v~~~---~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 519 AAIVVN---KAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp CEEEEE---CCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred ceEEEe---CCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 112221 2566778876 6899999999999999999997543
No 33
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.82 E-value=0.0036 Score=55.44 Aligned_cols=62 Identities=19% Similarity=0.317 Sum_probs=48.6
Q ss_pred eEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEeeC--CeeEEEEEEEcCCCCCCChHHHHHHHHHhcc
Q 013535 330 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG--GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 397 (441)
Q Consensus 330 ~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~g--~~~~d~F~v~d~~g~~~~~~~~~~l~~~l~~ 397 (441)
+.|.|.+.||||+|++|+.+|++.|+||.++.+.+.. +...=+|.+. . ++..+++|.++|.+
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~-----d~~~leqI~kqL~K 67 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-G-----DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-S-----CHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-c-----cHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999997543 3344455553 2 14677888888776
No 34
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.56 E-value=0.0062 Score=53.93 Aligned_cols=62 Identities=18% Similarity=0.323 Sum_probs=48.5
Q ss_pred eEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEeeC--CeeEEEEEEEcCCCCCCChHHHHHHHHHhcc
Q 013535 330 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG--GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 397 (441)
Q Consensus 330 ~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~g--~~~~d~F~v~d~~g~~~~~~~~~~l~~~l~~ 397 (441)
+.+.|...||||+|++|+.+|++.|+||.++.+.+.. +...=+|.+... +..+++|.++|.+
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d------~~~leql~kQL~K 68 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP------DEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC------HHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc------HHHHHHHHHHhcC
Confidence 5789999999999999999999999999999997443 334445555311 4677888888776
No 35
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.48 E-value=0.041 Score=49.33 Aligned_cols=110 Identities=15% Similarity=0.241 Sum_probs=74.4
Q ss_pred CeEEEEEE-ccCCCcHHHHHHHHHHhCCceEEEEEEE-ec--CCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCC
Q 013535 26 DATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYIS-SD--GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA 101 (441)
Q Consensus 26 ~~~~v~V~-~~DrpGLf~~i~~~L~~~glnI~~A~i~-t~--~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~ 101 (441)
+...|+|. .+|+||..+++...|++.|+||.--... +. .|..-..|.|...+. +...+.|++ +.....
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~-----~~a~~~L~~-~~~el~-- 86 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVG-----PAAVEKLDS-LRNEIG-- 86 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTH-----HHHHHHHHH-THHHHC--
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHH-----HHHHHHHHH-HHHhcC--
Confidence 45566654 7899999999999999999999755443 22 566666788854322 122222332 211111
Q ss_pred CCcceeeeecCCCCeEEEEEEeC---CCcchHHHHHHHHHhcCCeEEEEE
Q 013535 102 PSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAE 148 (441)
Q Consensus 102 ~~~~~~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~g~~I~~A~ 148 (441)
...+.. ..+...|.++|. ++||+.+++..+|++.|+||....
T Consensus 87 ---~~~v~~--~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 87 ---FSQLLY--DDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp ---CSEEEE--ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred ---cceEEE--eCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 011222 347788888875 899999999999999999998876
No 36
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.27 E-value=0.015 Score=52.51 Aligned_cols=64 Identities=14% Similarity=0.290 Sum_probs=49.1
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEe-eC-CeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHHh
Q 013535 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT-HN-DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187 (441)
Q Consensus 116 ~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T-~~-~~~~dvF~V~~~~~g~~~~~~~~~~~l~~~L~~~ 187 (441)
...|+|...|+||.|++|+++|+.+|+||.+..+.. .+ +...-++.|... +..+++|.+.|.+.
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--------e~~ieqL~kQL~KL 94 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--------DKTIEQIEKQAYKL 94 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--------TTHHHHHHHHHTTS
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--------HHHHHHHHHHhcCc
Confidence 578999999999999999999999999999988864 33 445556666541 23467777777653
No 37
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.20 E-value=0.014 Score=52.82 Aligned_cols=63 Identities=14% Similarity=0.278 Sum_probs=48.3
Q ss_pred ceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEE-eeC-CeeEEEEEEEcCCCCCCChHHHHHHHHHhcc
Q 013535 329 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS-TIG-GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 397 (441)
Q Consensus 329 ~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~-T~g-~~~~d~F~v~d~~g~~~~~~~~~~l~~~l~~ 397 (441)
.+.|.|...|+||.|++|+.+|++.|+||.+..+. |.. +...=++.+... +..+++|.++|.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcC
Confidence 47899999999999999999999999999999986 443 223334444322 3567888888887
No 38
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.17 E-value=0.013 Score=51.40 Aligned_cols=35 Identities=29% Similarity=0.536 Sum_probs=32.9
Q ss_pred EEEEEeCCccchHHHHHHHHHHCCceEEEEEEEee
Q 013535 331 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 365 (441)
Q Consensus 331 ~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~ 365 (441)
.|+|.+.||+|+|++|+++|+++++||..+.+.+.
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~ 36 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI 36 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC
Confidence 47999999999999999999999999999999766
No 39
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.17 E-value=0.047 Score=48.94 Aligned_cols=103 Identities=11% Similarity=0.076 Sum_probs=68.9
Q ss_pred CeEEEEE-EecCCcchHHHHHHHHHhCCceEEEEEEE-ec--CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHH---HH
Q 013535 250 DYTVITM-RSKDRPKLLFDIVCTLTDMQYVVFHGMVN-TG--RTEAYQEFYIRHVDGLPISSEAERERVIQCLEA---AI 322 (441)
Q Consensus 250 ~~t~I~V-~~~DrpGLl~~i~~~L~~~glnI~~A~i~-t~--~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~---~L 322 (441)
+.+.|+| ..+|+||.++++...|++.|+||.--... +. .|..--+|.|...+ .++..+.|++ .+
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~---------~~~a~~~L~~~~~el 85 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV---------GPAAVEKLDSLRNEI 85 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT---------HHHHHHHHHHTHHHH
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH---------HHHHHHHHHHHHHhc
Confidence 4445555 46899999999999999999999654322 22 34555567775421 1222233332 22
Q ss_pred hhh----cCCceEEEEEeC---CccchHHHHHHHHHHCCceEEEEE
Q 013535 323 ERR----ASEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAE 361 (441)
Q Consensus 323 ~~r----~~~~~~ieV~~~---DrpGLL~~It~~l~~~~v~I~~A~ 361 (441)
.-. ...-..|.|.+. ++||+.+++.++|++.||||....
T Consensus 86 ~~~~v~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 86 GFSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp CCSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CcceEEEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 100 123457777765 899999999999999999999877
No 40
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.90 E-value=0.021 Score=52.19 Aligned_cols=111 Identities=15% Similarity=0.261 Sum_probs=73.1
Q ss_pred CCeEEEEEE-ccCCCcHHHHHHHHHHhCCceEEEEEEEe---cCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCC
Q 013535 25 ADATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYISS---DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF 100 (441)
Q Consensus 25 ~~~~~v~V~-~~DrpGLf~~i~~~L~~~glnI~~A~i~t---~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~ 100 (441)
.+...|+|. .+|+||..+++.+.|++.|+||-=-.... .++..-..|.+...+. +...+.++ .+......
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~-----~~~~~~l~-~~~~~~~~ 106 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVG-----PAAVEKLD-SLRNEIGF 106 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGH-----HHHHHHHH-TTHHHHCC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhH-----HHHHHHHH-HHHhhhce
Confidence 456778876 69999999999999999999997543322 3456666687744321 11222222 22221110
Q ss_pred CCCcceeeeecCCCCeEEEEEEe---CCCcchHHHHHHHHHhcCCeEEEEE
Q 013535 101 APSLRSSVGVMPTEEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAE 148 (441)
Q Consensus 101 ~~~~~~~v~~~~~~~~t~i~v~~---~DrpGLl~~i~~~L~~~g~~I~~A~ 148 (441)
..+.. ..+...|.|+| +.+||+.+++-.+|++.|+||.--.
T Consensus 107 -----~~v~~--~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 107 -----SQLLY--DDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp -----SEEEE--ECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred -----eeEEE--ecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 11222 34566777776 6899999999999999999998775
No 41
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.72 E-value=0.16 Score=51.61 Aligned_cols=109 Identities=18% Similarity=0.307 Sum_probs=74.9
Q ss_pred CeEEEEEE-ccCCCcHHHHHHHHHHhCCceEEEEEEEec---CCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCC
Q 013535 26 DATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYISSD---GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA 101 (441)
Q Consensus 26 ~~~~v~V~-~~DrpGLf~~i~~~L~~~glnI~~A~i~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~ 101 (441)
+.+.|+|. .+|+||..+++.+.|+++|+||.--.+.+. .|..-..|.|...+. ++..+.|++ +......
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~~-----~~a~~~l~~-~~~~~~~- 335 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSDG-----RRAMEILKK-LQVQGNW- 335 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTTH-----HHHHHHHHH-HHTTTTC-
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechhH-----HHHHHHHHH-HHHHcCC-
Confidence 34567777 699999999999999999999986655442 455555688854221 223334443 3222211
Q ss_pred CCcceeeeecCCCCeEEEEEEeC---CCcchHHHHHHHHHhcCCeEEEE
Q 013535 102 PSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNA 147 (441)
Q Consensus 102 ~~~~~~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~g~~I~~A 147 (441)
..+.. ..+...+.|+|. ++||.++++..+|++.|+||..-
T Consensus 336 ----~~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 336 ----TNVLY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp ----SEEEE--ECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred ----ceEEE--eCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 11222 357788899885 89999999999999999999843
No 42
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.46 E-value=0.054 Score=47.39 Aligned_cols=59 Identities=19% Similarity=0.126 Sum_probs=45.4
Q ss_pred EEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 013535 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (441)
Q Consensus 118 ~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (441)
.|.|.+.||+|+|++|+.+|+.+++||....+.+. +. +++.-+ ..+.+.+..+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~-g~----i~~~~~-----~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI-GR----IYLNFA-----ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT-TE----EEEEEC-----CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC-CE----EEEEEE-----eCCHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999765 22 444442 1235667777777665
No 43
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.29 E-value=0.2 Score=50.78 Aligned_cols=103 Identities=14% Similarity=0.135 Sum_probs=70.2
Q ss_pred CCeEEEEEE-ecCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHH---
Q 013535 249 KDYTVITMR-SKDRPKLLFDIVCTLTDMQYVVFHGMVNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA--- 321 (441)
Q Consensus 249 ~~~t~I~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t~---~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~--- 321 (441)
.+.+.|+|. .+|+||.++++...|++.|+||.--...+. .|...-+|.|... + .++..+.|++.
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~------~---~~~a~~~l~~~~~~ 332 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS------D---GRRAMEILKKLQVQ 332 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT------T---HHHHHHHHHHHHTT
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech------h---HHHHHHHHHHHHHH
Confidence 466788888 699999999999999999999986544343 2444555776531 1 12222333331
Q ss_pred Hhh-h---cCCceEEEEEeC---CccchHHHHHHHHHHCCceEEEE
Q 013535 322 IER-R---ASEGLELELCTE---DRVGLLSDITRIFRENSLSIKRA 360 (441)
Q Consensus 322 L~~-r---~~~~~~ieV~~~---DrpGLL~~It~~l~~~~v~I~~A 360 (441)
+.. . ...-..+.|.+. ++||+++++.++|.+.||||...
T Consensus 333 ~~~~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 333 GNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp TTCSEEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred cCCceEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 210 0 112345777775 89999999999999999999944
No 44
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=94.98 E-value=0.13 Score=46.73 Aligned_cols=105 Identities=10% Similarity=0.090 Sum_probs=68.4
Q ss_pred CCCeEEEEEE-ecCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEccCCCCCCCHHHHHHHHHHHH---H
Q 013535 248 EKDYTVITMR-SKDRPKLLFDIVCTLTDMQYVVFHGMVNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLE---A 320 (441)
Q Consensus 248 ~~~~t~I~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t~---~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~---~ 320 (441)
+.+...|++. .+|+||+.+++...|++.|+||.--..... ++....+|.+... ..+...+.|. .
T Consensus 32 ~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~---------d~~~~~~~l~~~~~ 102 (200)
T 4go7_X 32 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD---------VGPAAVEKLDSLRN 102 (200)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG---------GHHHHHHHHHTTHH
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh---------hHHHHHHHHHHHHh
Confidence 3456677775 699999999999999999999975432221 2345555776531 2222222232 2
Q ss_pred HHhhh----cCCceEEEEE---eCCccchHHHHHHHHHHCCceEEEEE
Q 013535 321 AIERR----ASEGLELELC---TEDRVGLLSDITRIFRENSLSIKRAE 361 (441)
Q Consensus 321 ~L~~r----~~~~~~ieV~---~~DrpGLL~~It~~l~~~~v~I~~A~ 361 (441)
.+... .+.-..|.|. ...+||+.+++-++|++.||||.-..
T Consensus 103 ~~~~~~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 103 EIGFSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp HHCCSEEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred hhceeeEEEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 22111 1123445555 45899999999999999999998875
No 45
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=94.96 E-value=0.03 Score=51.45 Aligned_cols=61 Identities=11% Similarity=0.225 Sum_probs=42.4
Q ss_pred eEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeC-----CeEEEEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Q 013535 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN-----DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (441)
Q Consensus 116 ~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~-----~~~~dvF~V~~~~~g~~~~~~~~~~~l~~~L~~ 186 (441)
...|.+.+.||||+|++|+.+|+++++||...+..+.. +.+.-.+.+.+ . .++++-+.|++
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d---------~-~Le~LL~kLrk 69 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEG---------G-DFEKILERVKT 69 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECS---------S-CHHHHHHHHHT
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECC---------C-CHHHHHHHHhC
Confidence 46789999999999999999999999999999998853 35555555443 1 24566666543
No 46
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=94.91 E-value=0.051 Score=49.88 Aligned_cols=47 Identities=17% Similarity=0.137 Sum_probs=36.0
Q ss_pred eEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEec-----CCEEEEEEEE
Q 013535 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-----GGWFMDVFNV 73 (441)
Q Consensus 27 ~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t~-----~g~~~d~f~V 73 (441)
...|.|.+.||||++++++.+|++++.||...+..+. +|.+.-.+.+
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV 55 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEI 55 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEE
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEE
Confidence 3578999999999999999999999999999999874 5666655444
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.59 E-value=0.25 Score=50.86 Aligned_cols=106 Identities=12% Similarity=0.194 Sum_probs=71.9
Q ss_pred CeEEEEEEc---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCchHHHHHHHHHh--------
Q 013535 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-------- 94 (441)
Q Consensus 26 ~~~~v~V~~---~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L-------- 94 (441)
+...|+|.+ +++||+.+++..+|+++|+||.-....+.. .-.+|.|...+ .++..+.|++.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse--~~Is~~V~~~d-----~~~a~~~L~~~l~~~~~~~~ 389 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE--TNISLVVSEED-----VDKALKALKREFGDFGKKSF 389 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT--CCEEEEEEGGG-----HHHHHHHHHHHHCC----CT
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC--CEEEEEEechH-----HHHHHHHHHHHHhhhccccc
Confidence 345677775 678899999999999999999865553322 22347774432 134556666656
Q ss_pred cccCCCCCCcceeeeecCCCCeEEEEEEeC---CCcchHHHHHHHHHhcCCeEE
Q 013535 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVV 145 (441)
Q Consensus 95 ~~~~~~~~~~~~~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~g~~I~ 145 (441)
..... -..+.. ..+...+.|+|. ++||.++++..+|++.|+||.
T Consensus 390 ~~~~~-----~~~v~~--~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~ 436 (473)
T 3c1m_A 390 LNNNL-----IRDVSV--DKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIK 436 (473)
T ss_dssp TSCCC-----EEEEEE--EEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCC
T ss_pred ccccc-----cceEEE--eCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEE
Confidence 22110 011222 346777888885 589999999999999999993
No 48
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=92.57 E-value=0.59 Score=48.09 Aligned_cols=113 Identities=12% Similarity=0.144 Sum_probs=73.7
Q ss_pred CCeEEEEEEe---cCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHH---
Q 013535 249 KDYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI--- 322 (441)
Q Consensus 249 ~~~t~I~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L--- 322 (441)
.+.+.|+|.+ .++||+++++..+|++.|+||..-...+.. ..-+|.|... ..++..+.|.+.+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse--~~Is~~V~~~---------d~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE--TNISLVVSEE---------DVDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT--CCEEEEEEGG---------GHHHHHHHHHHHHCC-
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC--CEEEEEEech---------HHHHHHHHHHHHHhhh
Confidence 3567888886 678999999999999999999765443332 2334666542 1234444455444
Q ss_pred -----hhh--c------CCceEEEEEeC---CccchHHHHHHHHHHCCceEEEEEEEeeCCeeEE-EEEE
Q 013535 323 -----ERR--A------SEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKD-TFYV 375 (441)
Q Consensus 323 -----~~r--~------~~~~~ieV~~~---DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~~~d-~F~v 375 (441)
... . +.-.++.|.+. ++||+++++.++|++.||||... ++|..... +|.|
T Consensus 385 ~~~~~~~~~~~~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mi---sqgtSe~~Is~vV 451 (473)
T 3c1m_A 385 GKKSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMI---AQGSSEVNISFVI 451 (473)
T ss_dssp ---CTTSCCCEEEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEE---EESSCSSEEEEEE
T ss_pred cccccccccccceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEE---ecCCCCceEEEEE
Confidence 211 0 11345777776 59999999999999999999433 34444333 4544
No 49
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=91.73 E-value=0.43 Score=49.84 Aligned_cols=63 Identities=21% Similarity=0.306 Sum_probs=49.4
Q ss_pred CCceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEee--CCeeEEEEEEEcCCCCCCChHHHHHHHH
Q 013535 327 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI--GGKVKDTFYVTDVTGNPVDPKIIDSIRR 393 (441)
Q Consensus 327 ~~~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~--g~~~~d~F~v~d~~g~~~~~~~~~~l~~ 393 (441)
++.+.+-+.-.|+||.+..|+..|.++||||...++... |+.+.=.+.+ ..+++++.+++|++
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v----d~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL----DQDVPDDVRTAIAA 516 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE----SSCCCHHHHHHHHH
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE----CCCCCHHHHHHHhc
Confidence 446889999999999999999999999999999999865 4445544544 34556677777765
No 50
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.44 E-value=0.31 Score=49.21 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=40.7
Q ss_pred eEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEeeCCeeEEEEEE
Q 013535 330 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 375 (441)
Q Consensus 330 ~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~~~d~F~v 375 (441)
..|-+.-.|+||.+..|+.+|.++|+||......+.|+.+.-++-+
T Consensus 332 ~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 332 RRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp EEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 4677888899999999999999999999999999988777666666
No 51
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=91.40 E-value=0.92 Score=44.05 Aligned_cols=92 Identities=16% Similarity=0.202 Sum_probs=62.2
Q ss_pred hCC-ceEEEEEEEecC-CeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhhcCCceEEEEEeC-CccchHHHHHHHH
Q 013535 274 DMQ-YVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTE-DRVGLLSDITRIF 350 (441)
Q Consensus 274 ~~g-lnI~~A~i~t~~-~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~r~~~~~~ieV~~~-DrpGLL~~It~~l 350 (441)
..| |+|..-.|.... ++.. |+|.......... .....+.|-+..+ |+||-|+++...|
T Consensus 163 ~Yg~L~il~~~I~D~~~N~TR--Flvl~~~~~~~~~-----------------~~~~kTSl~f~~~~~~pGaL~~~L~~F 223 (313)
T 3mwb_A 163 EQPGLNVLAEDIGDNPDAVTR--FILVSRPGALPER-----------------TGADKTTVVVPLPEDHPGALMEILDQF 223 (313)
T ss_dssp HCTTCEEEESCCCSCTTCEEE--EEEEECSCCCCCC-----------------CSSEEEEEEEECSSCCTTHHHHHHHHH
T ss_pred HcCChhhhhhcccCCCcceeE--EEEEecCCCCCCC-----------------CCCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 467 899988887664 3333 7766543321110 0112466667775 9999999999999
Q ss_pred HHCCceEEEEEEEeeC-CeeEEEEEEEcCCCCCCCh
Q 013535 351 RENSLSIKRAEISTIG-GKVKDTFYVTDVTGNPVDP 385 (441)
Q Consensus 351 ~~~~v~I~~A~i~T~g-~~~~d~F~v~d~~g~~~~~ 385 (441)
+.+|||+.+.+..-.. ...+=.||| |..|..-++
T Consensus 224 a~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d~ 258 (313)
T 3mwb_A 224 ASRGVNLSRIESRPTGQYLGHYFFSI-DADGHATDS 258 (313)
T ss_dssp HTTTCCEEEEEEEECSSSTTSEEEEE-EEESCTTSH
T ss_pred HHCCccEEEEEEeecCCCCccEEEEE-EEeCCCCcH
Confidence 9999999999977544 345668888 556766443
No 52
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=90.80 E-value=0.5 Score=45.28 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=43.2
Q ss_pred ceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEeeCC-eeEEEEEEEcCCCCCCC
Q 013535 329 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGG-KVKDTFYVTDVTGNPVD 384 (441)
Q Consensus 329 ~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~g~-~~~d~F~v~d~~g~~~~ 384 (441)
.+.|-+..+|+||-|+++...|+.+|||+.+.+..-... ...=.||| |-+|..-+
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffv-D~eg~~~d 255 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYA-DFIGHRED 255 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEE-EEESCTTS
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEE-EEecCCCc
Confidence 345555567999999999999999999999999875544 46678888 55677644
No 53
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=90.38 E-value=0.71 Score=46.50 Aligned_cols=48 Identities=13% Similarity=0.222 Sum_probs=42.5
Q ss_pred CeEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEE
Q 013535 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73 (441)
Q Consensus 26 ~~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V 73 (441)
+...|.+.-.|+||.+.+|+.+|+++|+||......+.++.++-++.+
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 456788999999999999999999999999999998888888866665
No 54
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=89.94 E-value=1.6 Score=42.72 Aligned_cols=48 Identities=21% Similarity=0.427 Sum_probs=38.8
Q ss_pred CccchHHHHHHHHHHCCceEEEEEEEeeCCe-eEEEEEEEcCCCCCCChH
Q 013535 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGK-VKDTFYVTDVTGNPVDPK 386 (441)
Q Consensus 338 DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~-~~d~F~v~d~~g~~~~~~ 386 (441)
|+||-|+++-..|+.+|||+.+.+..-.... .+=.||| |.+|..-++.
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d~~ 265 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAPWEER 265 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCTTSHH
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCcCCHH
Confidence 7999999999999999999999998766555 5557887 5567765543
No 55
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=88.11 E-value=1.4 Score=44.85 Aligned_cols=106 Identities=15% Similarity=0.267 Sum_probs=67.7
Q ss_pred eEEEEEEc---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCCC
Q 013535 27 ATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPS 103 (441)
Q Consensus 27 ~~~v~V~~---~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~~ 103 (441)
...|+|.+ ++.||..+++..+|+++|+||.-.. +... -..|.|...+-.+ ...++.++|.+.+..
T Consensus 298 ~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~~~~--~is~~V~~~d~~~-~~~~~~~el~~~~~~------- 365 (446)
T 3tvi_A 298 FTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--SGVD--SVSLVIEDCKLDG-KCDKIIEEIKKQCNP------- 365 (446)
T ss_dssp EEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--EETT--EEEEEEEHHHHTT-THHHHHHHHHHHSCC-------
T ss_pred EEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--cCCC--EEEEEEecchHHH-HHHHHHHHHHHhcCC-------
Confidence 34567774 6899999999999999999997432 2111 2346664432110 001223333332211
Q ss_pred cceeeeecCCCCeEEEEEEeC---CCcchHHHHHHHHHhcCCeEEEEE
Q 013535 104 LRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAE 148 (441)
Q Consensus 104 ~~~~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~g~~I~~A~ 148 (441)
..+.. ..+...|.|+|. ++||+.+++..+|++.|+||....
T Consensus 366 --~~v~v--~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 366 --DSIEI--HPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp --SEEEE--EEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred --CcEEE--eCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 11222 246788899875 589999999999999999998754
No 56
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=87.46 E-value=2 Score=44.71 Aligned_cols=62 Identities=16% Similarity=0.194 Sum_probs=47.4
Q ss_pred CeEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCchHHHHHHHH
Q 013535 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92 (441)
Q Consensus 26 ~~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t--~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~ 92 (441)
.+..+.+.-+|+||.+.+++..|.++|+||...++.. .+|.++-.+.+.++ + +++..+.|++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~----~-~~~~l~~l~~ 516 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD----V-PDDVRTAIAA 516 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC----C-CHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC----C-CHHHHHHHhc
Confidence 4567888899999999999999999999999999985 46777766666222 2 2446666664
No 57
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=86.93 E-value=1.6 Score=41.45 Aligned_cols=80 Identities=13% Similarity=0.180 Sum_probs=55.2
Q ss_pred CCceEEEEEEEecCC-eEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhhcCCceEEEEEe---CCccchHHHHHHHH
Q 013535 275 MQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCT---EDRVGLLSDITRIF 350 (441)
Q Consensus 275 ~glnI~~A~i~t~~~-~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~r~~~~~~ieV~~---~DrpGLL~~It~~l 350 (441)
.||+|..-.|....+ +.. |+|..... +. . ...+.|-+.. .|+||-|+++...|
T Consensus 154 ygL~il~~~I~D~~~N~TR--F~vl~~~~-~~-------------------~-~~ktsl~f~~~~~~~~pGaL~~~L~~F 210 (267)
T 2qmw_A 154 YGFTPIDTHIEDYPHNVTR--FLVIKNQQ-QF-------------------D-QNATSLMFLITPMHDKPGLLASVLNTF 210 (267)
T ss_dssp GTCCEEEECCCSCSCCEEE--EEEEESCC-CC-------------------C-SSCSEEEEEEEESSCCTTHHHHHHHHH
T ss_pred CCCcEeeccccCCCCCceE--EEEEecCC-CC-------------------C-CCeEEEEEEcCCCCCCcChHHHHHHHH
Confidence 477777777766533 332 66554322 10 0 1245566666 89999999999999
Q ss_pred HHCCceEEEEEEEeeC-CeeEEEEEEEc
Q 013535 351 RENSLSIKRAEISTIG-GKVKDTFYVTD 377 (441)
Q Consensus 351 ~~~~v~I~~A~i~T~g-~~~~d~F~v~d 377 (441)
+.+|||+.+.+..-.. ....=.|||.-
T Consensus 211 a~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 211 ALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp HTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred HHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 9999999999987554 44667899843
No 58
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=86.51 E-value=2.9 Score=42.56 Aligned_cols=114 Identities=12% Similarity=0.149 Sum_probs=72.2
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhhh-
Q 013535 250 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR- 325 (441)
Q Consensus 250 ~~t~I~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~r- 325 (441)
+.+.|+|.+ ++.||.++++...|++.|++|... .+... --+|.|...+-.. ..+.+.+.|...+...
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~~~~--~is~~V~~~d~~~-----~~~~~~~el~~~~~~~~ 367 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PSGVD--SVSLVIEDCKLDG-----KCDKIIEEIKKQCNPDS 367 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CEETT--EEEEEEEHHHHTT-----THHHHHHHHHHHSCCSE
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ecCCC--EEEEEEecchHHH-----HHHHHHHHHHHhcCCCc
Confidence 566788885 699999999999999999999743 22121 2336665421110 1233333333322100
Q ss_pred ---cCCceEEEEEeC---CccchHHHHHHHHHHCCceEEEEEEEeeCCe-eEEEEEE
Q 013535 326 ---ASEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGK-VKDTFYV 375 (441)
Q Consensus 326 ---~~~~~~ieV~~~---DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~-~~d~F~v 375 (441)
...-..|.|.+. .+||+.+++.++|++.||||.... +|.. ..=+|.|
T Consensus 368 v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs---qgtSei~Is~vV 421 (446)
T 3tvi_A 368 IEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID---QGSSEINVIVGV 421 (446)
T ss_dssp EEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE---ECSCTTEEEEEE
T ss_pred EEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE---ecCCCceEEEEE
Confidence 012457888876 589999999999999999998765 4433 2234555
No 59
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=84.77 E-value=5.3 Score=40.27 Aligned_cols=50 Identities=18% Similarity=0.305 Sum_probs=42.1
Q ss_pred CCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEEE
Q 013535 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162 (441)
Q Consensus 113 ~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~V 162 (441)
..+...|.+.-.|.||.|..|+.+|+++|+||..-...|.++.+--+.-|
T Consensus 340 ~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 340 RPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp CSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 34678999999999999999999999999999999999987665433333
No 60
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=81.94 E-value=1.2 Score=45.47 Aligned_cols=33 Identities=42% Similarity=0.558 Sum_probs=29.8
Q ss_pred ceEEEEEeCCccchHHHHHHHHHHCCceEEEEE
Q 013535 329 GLELELCTEDRVGLLSDITRIFRENSLSIKRAE 361 (441)
Q Consensus 329 ~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~ 361 (441)
.|.+-+...|+||.|++|+.+|.++||+|.+..
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~ 391 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDAMV 391 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEE
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeEEe
Confidence 478999999999999999999999999999875
No 61
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=81.83 E-value=4.2 Score=42.11 Aligned_cols=137 Identities=14% Similarity=0.152 Sum_probs=82.0
Q ss_pred eEEEEEEc---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCC-chHHHHHHHHHhcccCCCCC
Q 013535 27 ATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIR-DKEVIDYIQQRLETDASFAP 102 (441)
Q Consensus 27 ~~~v~V~~---~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~-~~~~~~~L~~~L~~~~~~~~ 102 (441)
.+.|+|.+ .+++|..+++..+|+++|+||.-.. ++.. -.+|.|...+..... ..+.++.+.+.|....
T Consensus 341 ~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~-sse~---sis~~v~~~~~~~~~~~~~~l~~~~~el~~~~---- 412 (510)
T 2cdq_A 341 VTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA-TSEV---SISLTLDPSKLWSRELIQQELDHVVEELEKIA---- 412 (510)
T ss_dssp EEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE-EETT---EEEEEECCGGGSSSCCCHHHHHHHHHHHTTTS----
T ss_pred eEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE-eCCC---eEEEEEechHhhhhhHHHHHHHHHHHHhCCCC----
Confidence 35667774 7899999999999999999998552 2222 223566332211100 1223344443343211
Q ss_pred CcceeeeecCCCCeEEEEEEeC--CCcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEEEEeCCCCCCCCCHHHHHHH
Q 013535 103 SLRSSVGVMPTEEHTSIEFTGT--DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180 (441)
Q Consensus 103 ~~~~~v~~~~~~~~t~i~v~~~--DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~V~~~~~g~~~~~~~~~~~l 180 (441)
.+.. ..+...|.|+|. ..||+.+++..+|++.|+||....-- .....-.|.|.. +..++.
T Consensus 413 ----~v~~--~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqG--sSei~Is~vV~~----------~d~~~A 474 (510)
T 2cdq_A 413 ----VVNL--LKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQG--ASKVNISFIVNE----------AEAEGC 474 (510)
T ss_dssp ----EEEE--EEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEEC--TTCSEEEEEEEH----------HHHHHH
T ss_pred ----eEEE--eCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEec--CCcceEEEEEeH----------HHHHHH
Confidence 1222 346778888887 77899999999999999999765311 122333454533 234555
Q ss_pred HHHHHHhhc
Q 013535 181 KELLFNVLR 189 (441)
Q Consensus 181 ~~~L~~~L~ 189 (441)
-+.|++.+-
T Consensus 475 v~aLH~~f~ 483 (510)
T 2cdq_A 475 VQALHKSFF 483 (510)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 566666654
No 62
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=80.10 E-value=13 Score=36.19 Aligned_cols=49 Identities=18% Similarity=0.110 Sum_probs=37.6
Q ss_pred eEEEEEEeC--CCcchHHHHHHHHHhcCCeEEEEEEEeeCCe-EEEEEEEEe
Q 013535 116 HTSIEFTGT--DRPGLFSEVCAVLADLHCNVVNAEIWTHNDR-AAAVVHVTD 164 (441)
Q Consensus 116 ~t~i~v~~~--DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~-~~dvF~V~~ 164 (441)
.+.+.+..+ |+||-|+++-..|+.+|+|+..-......+. ..=.|||.-
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 257 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL 257 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE
Confidence 344444444 7999999999999999999998888776554 566788755
No 63
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=78.40 E-value=5.2 Score=40.31 Aligned_cols=49 Identities=20% Similarity=0.275 Sum_probs=40.6
Q ss_pred CCeEEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEE
Q 013535 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73 (441)
Q Consensus 25 ~~~~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V 73 (441)
.+...|++.=+|.||.+.+|..+|+++|+||.+-...|.+++.+-+.-|
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 3568999999999999999999999999999977767777666533433
No 64
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=77.77 E-value=7.4 Score=37.07 Aligned_cols=50 Identities=16% Similarity=0.074 Sum_probs=41.4
Q ss_pred CeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeC-CeEEEEEEEEe
Q 013535 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN-DRAAAVVHVTD 164 (441)
Q Consensus 115 ~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~-~~~~dvF~V~~ 164 (441)
..|.|.+..+|+||-|+++-..|+.+|+|+..-...... ..+.=.|||.-
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~ 249 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF 249 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE
Confidence 456777777899999999999999999999988877654 44777888865
No 65
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=76.31 E-value=5.3 Score=41.39 Aligned_cols=118 Identities=13% Similarity=0.130 Sum_probs=73.3
Q ss_pred CCeEEEEEEe---cCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEccCCCCCC-CHHHHHHHHHHHHHHHhh
Q 013535 249 KDYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS-SEAERERVIQCLEAAIER 324 (441)
Q Consensus 249 ~~~t~I~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~F~V~~~~g~~i~-~~~~~~~l~~~L~~~L~~ 324 (441)
.+.+.|+|.+ .+++|+++++..+|++.|+||.-- .+.. .--+|.|...+..... ....++++...|.. + .
T Consensus 339 ~~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I--~sse--~sis~~v~~~~~~~~~~~~~~l~~~~~el~~-~-~ 412 (510)
T 2cdq_A 339 RNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV--ATSE--VSISLTLDPSKLWSRELIQQELDHVVEELEK-I-A 412 (510)
T ss_dssp EEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE--EEET--TEEEEEECCGGGSSSCCCHHHHHHHHHHHTT-T-S
T ss_pred CCeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE--EeCC--CeEEEEEechHhhhhhHHHHHHHHHHHHhCC-C-C
Confidence 3567888985 789999999999999999999865 2221 2223565432211110 11223333222221 0 0
Q ss_pred h---cCCceEEEEEeC--CccchHHHHHHHHHHCCceEEEEEEEeeCCeeE-EEEEE
Q 013535 325 R---ASEGLELELCTE--DRVGLLSDITRIFRENSLSIKRAEISTIGGKVK-DTFYV 375 (441)
Q Consensus 325 r---~~~~~~ieV~~~--DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~~~-d~F~v 375 (441)
. ...-..|.|.+. ..||+.+++..+|++.||||.... +|.... =+|.|
T Consensus 413 ~v~~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---qGsSei~Is~vV 466 (510)
T 2cdq_A 413 VVNLLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---QGASKVNISFIV 466 (510)
T ss_dssp EEEEEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---ECTTCSEEEEEE
T ss_pred eEEEeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---ecCCcceEEEEE
Confidence 0 112356777777 788999999999999999998764 554433 35655
No 66
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=74.16 E-value=2.7 Score=36.17 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=61.9
Q ss_pred CeEEEEEEc---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCCCCC
Q 013535 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (441)
Q Consensus 26 ~~~~v~V~~---~DrpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~~~~ 102 (441)
+...|+|.+ +++||..+++...|+++|+||.-.. +... -.+|.|.+.+ .. ..+.+.|...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~~-------~~-~~il~~l~~~----- 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDNDK-------NL-PDIVRALSDI----- 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCCT-------TH-HHHHHHHTTT-----
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECChH-------HH-HHHHHHHhcc-----
Confidence 456777773 6789999999999999999996332 2112 2346663321 11 2222233221
Q ss_pred CcceeeeecCCCCeEEEEEEeC---CCcchHHHHHHHHHhcCCeEEEEE
Q 013535 103 SLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAE 148 (441)
Q Consensus 103 ~~~~~v~~~~~~~~t~i~v~~~---DrpGLl~~i~~~L~~~g~~I~~A~ 148 (441)
..+.. ..+...|.+.|. ++||+.+++..+|+ |+||....
T Consensus 80 ---~~v~~--~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is 121 (157)
T 3mah_A 80 ---GDVTV--DKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS 121 (157)
T ss_dssp ---EEEEE--EEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE
T ss_pred ---CeEEE--eCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe
Confidence 11222 236778888875 68999999999999 99987654
No 67
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=71.85 E-value=12 Score=36.16 Aligned_cols=50 Identities=16% Similarity=0.187 Sum_probs=40.3
Q ss_pred CeEEEEEEeC-CCcchHHHHHHHHHhcCCeEEEEEEEeeC-CeEEEEEEEEe
Q 013535 115 EHTSIEFTGT-DRPGLFSEVCAVLADLHCNVVNAEIWTHN-DRAAAVVHVTD 164 (441)
Q Consensus 115 ~~t~i~v~~~-DrpGLl~~i~~~L~~~g~~I~~A~i~T~~-~~~~dvF~V~~ 164 (441)
..|.|.+..+ |+||-|+++-..|+.+|+|+..-...... +...=.|||.-
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 251 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA 251 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE
Confidence 5677777775 99999999999999999999888877643 34566788865
No 68
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=69.22 E-value=4.2 Score=41.32 Aligned_cols=38 Identities=18% Similarity=0.316 Sum_probs=31.9
Q ss_pred CCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEE
Q 013535 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150 (441)
Q Consensus 113 ~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~ 150 (441)
-...+-+.+...|+||.|+.|+++|.++|++|.+..-.
T Consensus 356 ~~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~ 393 (444)
T 3mtj_A 356 VRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQK 393 (444)
T ss_dssp CEEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeec
Confidence 34677888889999999999999999999999886543
No 69
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=68.40 E-value=16 Score=34.39 Aligned_cols=50 Identities=24% Similarity=0.244 Sum_probs=40.3
Q ss_pred CeEEEEEEe---CCCcchHHHHHHHHHhcCCeEEEEEEEeeC-CeEEEEEEEEe
Q 013535 115 EHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHN-DRAAAVVHVTD 164 (441)
Q Consensus 115 ~~t~i~v~~---~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~-~~~~dvF~V~~ 164 (441)
..|.|.+.. +|+||-|+++-+.|+.+|+|+..-...... +.+.=.|||.-
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 455666666 899999999999999999999988877654 44677888866
No 70
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=66.97 E-value=2.9 Score=35.89 Aligned_cols=109 Identities=16% Similarity=0.168 Sum_probs=64.5
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHhh-h
Q 013535 250 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER-R 325 (441)
Q Consensus 250 ~~t~I~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~~-r 325 (441)
+.+.|+|.+ ++.||..+++..+|++.|+||..-. +... --+|.|.+.+ .++++.+.|.+ +.. .
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~~--------~~~~il~~l~~-~~~v~ 83 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDNDK--------NLPDIVRALSD-IGDVT 83 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCCT--------THHHHHHHHTT-TEEEE
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECChH--------HHHHHHHHHhc-cCeEE
Confidence 456778774 5789999999999999999985432 2222 2336654321 12222222221 000 0
Q ss_pred -cCCceEEEEEeC---CccchHHHHHHHHHHCCceEEEEEEEeeCCe-eEEEEEEE
Q 013535 326 -ASEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGK-VKDTFYVT 376 (441)
Q Consensus 326 -~~~~~~ieV~~~---DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~-~~d~F~v~ 376 (441)
...-..|.|.+. ++||+.+++..+|+ |+||.... +|.. ..=.|.|.
T Consensus 84 ~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is---qg~Se~~is~vv~ 134 (157)
T 3mah_A 84 VDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS---YGGSNYNVSVLVK 134 (157)
T ss_dssp EEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE---ECSSSSCEEEEEE
T ss_pred EeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe---eCCCCCEEEEEEc
Confidence 012356777765 68999999999999 99988754 4433 23455553
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=59.88 E-value=8.9 Score=38.59 Aligned_cols=50 Identities=22% Similarity=0.407 Sum_probs=40.3
Q ss_pred ceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEee-CCeeEEEEEEEcCC
Q 013535 329 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTDVT 379 (441)
Q Consensus 329 ~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~-g~~~~d~F~v~d~~ 379 (441)
.+.|-+...|+||-|+++...|+.+|||+.+.+..-. +...+=.||| |-+
T Consensus 34 KTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfV-D~e 84 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFT-YLD 84 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEE-CBC
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEE-EEe
Confidence 4666677789999999999999999999999887654 3446678888 443
No 72
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=59.18 E-value=40 Score=29.10 Aligned_cols=89 Identities=7% Similarity=0.105 Sum_probs=57.3
Q ss_pred HHHHHHHHhCCceEEEEEEEecCC-eEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHh--h--hcCCceEEEEEeC--C
Q 013535 266 FDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE--R--RASEGLELELCTE--D 338 (441)
Q Consensus 266 ~~i~~~L~~~glnI~~A~i~t~~~-~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~L~--~--r~~~~~~ieV~~~--D 338 (441)
.-+..++.. |+.+.+..+...++ +.+- .+|....|-. -+.++.+-..|...|. . ..+..|.+||+++ |
T Consensus 16 ~li~p~~~~-g~eLvdve~~~~g~~~~Lr-V~ID~~~gi~---lddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPGld 90 (164)
T 1ib8_A 16 EVVEPVIEA-PFELVDIEYGKIGSDMILS-IFVDKPEGIT---LNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLE 90 (164)
T ss_dssp HHHHHHHCS-SSEEEEEEEEEETTEEEEE-EEEECSSCCC---HHHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCSSS
T ss_pred HHHHHHHcC-CcEEEEEEEEecCCCcEEE-EEEECCCCCC---HHHHHHHHHHHHHHhccccccCCCCCeEEEEeCCCCC
Confidence 334566667 99999999988765 4443 4444444422 3578888888888887 3 2357899999976 6
Q ss_pred ccchHHHHHHHHHHCCceEEEEEEEe
Q 013535 339 RVGLLSDITRIFRENSLSIKRAEIST 364 (441)
Q Consensus 339 rpGLL~~It~~l~~~~v~I~~A~i~T 364 (441)
|| |.....+-.-.|-. +++.+
T Consensus 91 Rp--L~~~~df~r~~G~~---V~V~l 111 (164)
T 1ib8_A 91 RP--LKTKDAVAGAVGKY---IHVGL 111 (164)
T ss_dssp SC--CSSHHHHHHHCSEE---EEEEC
T ss_pred CC--CCCHHHHHHhCCcE---EEEEE
Confidence 66 44444444445533 34555
No 73
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=39.96 E-value=91 Score=24.62 Aligned_cols=49 Identities=18% Similarity=0.106 Sum_probs=36.2
Q ss_pred CeEEEEEEccCCCcHHHHHHHHHHhCCce-EEEEEEEecCCEEEEEEEEEcCCCCCC
Q 013535 26 DATVIKVDSVNKHGILLQVIQVLNDVNLV-IKKAYISSDGGWFMDVFNVIDCDGKKI 81 (441)
Q Consensus 26 ~~~~v~V~~~DrpGLf~~i~~~L~~~gln-I~~A~i~t~~g~~~d~f~V~~~~g~~~ 81 (441)
++..+.+.+.| +......+...|+. ++..-.....|.. |++.||+|+.+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45678888888 88889999999999 7754333445544 77889999854
No 74
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=39.29 E-value=23 Score=35.55 Aligned_cols=52 Identities=12% Similarity=0.118 Sum_probs=41.1
Q ss_pred CCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEee-CCeEEEEEEEEe
Q 013535 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTD 164 (441)
Q Consensus 113 ~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~-~~~~~dvF~V~~ 164 (441)
....|.|.+..+|+||-|+++-+.|+.+|+|+..-..... +....=.|+|.-
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 3456777777799999999999999999999987776654 344667788754
No 75
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=36.43 E-value=60 Score=25.63 Aligned_cols=67 Identities=13% Similarity=0.199 Sum_probs=41.0
Q ss_pred CChHHHHHHHhcCCCEEEEeeCCCCCeEEEEEEccC-CCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEc
Q 013535 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVN-KHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75 (441)
Q Consensus 1 ~~~~~~~~~~~~~~~~V~v~~~~~~~~~~v~V~~~D-rpGLf~~i~~~L~~~glnI~~A~i~t~~g~~~d~f~V~~ 75 (441)
+|++|.+.+.....+ ....-+.|+..+.. ...+++.+++.+ ....||+.|.|..-+|..+..++|..
T Consensus 4 lP~~~~~rL~~~~~~-------~~~~lvrL~f~g~~~~~PiIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l 71 (106)
T 3dhx_A 4 IPEDYQERLQAEPFT-------DCVPMLRLEFTGQSVDAPLLSETARRF-NVNNNIISAQMDYAGGVKFGIMLTEM 71 (106)
T ss_dssp SCHHHHHHCBSSCCT-------TEEEEEEEEEEEECTTCCHHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCHHHHHhcccccCC-------CCceEEEEEEcCCccChhHHHHHHHHH-CCCEEEEEEEeEEECCeeEEEEEEEE
Confidence 467777666432211 01112344444433 234777777665 36689999999998888888887744
No 76
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=35.79 E-value=89 Score=24.70 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=35.5
Q ss_pred CeEEEEEEecCCcchHHHHHHHHHhCCce-EEEEEEEecCCeEEEEEEEEccCCCCC
Q 013535 250 DYTVITMRSKDRPKLLFDIVCTLTDMQYV-VFHGMVNTGRTEAYQEFYIRHVDGLPI 305 (441)
Q Consensus 250 ~~t~I~V~~~DrpGLl~~i~~~L~~~gln-I~~A~i~t~~~~~~d~F~V~~~~g~~i 305 (441)
.++.+.+.+.| +......|..+|+. +...-.....|.. |++.|++|..+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45667888888 78888899999999 7654333333433 88999999864
No 77
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=32.68 E-value=1.5e+02 Score=30.43 Aligned_cols=129 Identities=16% Similarity=0.144 Sum_probs=77.2
Q ss_pred EEEEEEccCCCcHHHHHHHHHHhCCceEEEEEEEe-cCCEEEEEEEEEcCCCCCCCchHHHHHHHHHhcccCC----CCC
Q 013535 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS----FAP 102 (441)
Q Consensus 28 ~~v~V~~~DrpGLf~~i~~~L~~~glnI~~A~i~t-~~g~~~d~f~V~~~~g~~~~~~~~~~~L~~~L~~~~~----~~~ 102 (441)
..+.|.-+|+||-|.+++.+|. +-||.+-.-.. ..+.+ .+++.....+. .+..+.|.+.|....- +..
T Consensus 339 ~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~-~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~~ 411 (514)
T 1tdj_A 339 ALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNA-CIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLSD 411 (514)
T ss_dssp EEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBC-EEEEEEECSST----HHHHHHHHHHHTSSSCEEETTSS
T ss_pred ccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeE-EEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECCC
Confidence 4677889999999999999988 78888654432 22222 22232232221 3456777777766531 111
Q ss_pred Cc--ceeeee------cCCCCeEEEEEEeCCCcchHHHHHHHHHhcCCeEEEEEEEeeC---CeEEEEEEEEe
Q 013535 103 SL--RSSVGV------MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN---DRAAAVVHVTD 164 (441)
Q Consensus 103 ~~--~~~v~~------~~~~~~t~i~v~~~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~---~~~~dvF~V~~ 164 (441)
.. +..+.. ..-.+-..+...-|.|||-|.+.-..|.. +.||.-.+-..+| |++.--|.|.+
T Consensus 412 ~~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~~~~~~~~~~ 483 (514)
T 1tdj_A 412 DEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGRVLAAFELGD 483 (514)
T ss_dssp CHHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSCEEEEEC---
T ss_pred CHHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCcccEEEEEEcCC
Confidence 10 001110 11235567788899999999999998875 6777666655554 56777776644
No 78
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=23.76 E-value=92 Score=25.90 Aligned_cols=46 Identities=15% Similarity=0.069 Sum_probs=32.6
Q ss_pred CCeEEEEEEe---CCCcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEEEEe
Q 013535 114 EEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (441)
Q Consensus 114 ~~~t~i~v~~---~DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~V~~ 164 (441)
..+..|+|.+ -|-.|+++.++..|++.|++|.-.. |+. .|...|..
T Consensus 69 ~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iS--ty~---tDhIlVp~ 117 (133)
T 1zvp_A 69 ALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANVIA--GYY---HDHIFVQK 117 (133)
T ss_dssp SCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEE--CSS---CEEEEEEG
T ss_pred CCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEE--ecc---ccEEEEeh
Confidence 3555666655 5899999999999999999997654 432 45555543
No 79
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=23.48 E-value=57 Score=27.21 Aligned_cols=45 Identities=18% Similarity=0.283 Sum_probs=32.7
Q ss_pred CeEEEEEEeC---CCcchHHHHHHHHHhcCCeEEEEEEEeeCCeEEEEEEEEe
Q 013535 115 EHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (441)
Q Consensus 115 ~~t~i~v~~~---DrpGLl~~i~~~L~~~g~~I~~A~i~T~~~~~~dvF~V~~ 164 (441)
.+-.|+|.++ |-.|+++.+++.|++.|++|.-.. |+. .|...|..
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~iS--ty~---tD~IlVp~ 108 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVS--TFD---GDHLLVRS 108 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEE--CSS---CEEEEEEG
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEE--ecc---ccEEEEeH
Confidence 4556666655 888999999999999999987654 432 45555543
No 80
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=21.41 E-value=2e+02 Score=29.44 Aligned_cols=111 Identities=13% Similarity=0.070 Sum_probs=72.9
Q ss_pred eEEEEEEecCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCCHHHHHHHHHHHHHH------Hh-
Q 013535 251 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA------IE- 323 (441)
Q Consensus 251 ~t~I~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~~~~~~d~F~V~~~~g~~i~~~~~~~~l~~~L~~~------L~- 323 (441)
...+.|.-+||||-|.+++..|. +-||.+-.=...+.....++......+. ++..+.|.++|++. |.
T Consensus 338 ~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~~ 411 (514)
T 1tdj_A 338 EALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLSD 411 (514)
T ss_dssp EEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST----HHHHHHHHHHHTSSSCEEETTSS
T ss_pred cccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECCC
Confidence 35678899999999999999887 6888876544322222223333332221 24667777777532 10
Q ss_pred --------h-----hcC---CceEEEEEeCCccchHHHHHHHHHHCCceEEEEEEEeeCCe
Q 013535 324 --------R-----RAS---EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGK 368 (441)
Q Consensus 324 --------~-----r~~---~~~~ieV~~~DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~ 368 (441)
+ +.+ .--+....=+.|||-|.+.-..|.. +-||.-.|-..+|..
T Consensus 412 ~~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~ 471 (514)
T 1tdj_A 412 DEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTD 471 (514)
T ss_dssp CHHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTC
T ss_pred CHHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCC
Confidence 0 111 2346788899999999999998875 688888887777754
No 81
>3v69_A Protein filia; RNA-binding, embryogenesis, KH domain, RNA binding, P binding; 2.20A {Mus musculus}
Probab=21.25 E-value=72 Score=26.80 Aligned_cols=36 Identities=11% Similarity=-0.049 Sum_probs=30.2
Q ss_pred ChHHHHHHHhcCCCEEEEeeCCCCCeEEEEEEccCC
Q 013535 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNK 37 (441)
Q Consensus 2 ~~~~~~~~~~~~~~~V~v~~~~~~~~~~v~V~~~Dr 37 (441)
+.+|+.-|+......+.|+.-.+.+.++|+|+++.+
T Consensus 74 ~Gs~Ip~IE~~SqTLIqV~~~~s~g~tEVtIfG~~~ 109 (140)
T 3v69_A 74 DGEHIPHLESMLHTLIHVNVWGPERRAEIWIFGPPP 109 (140)
T ss_dssp GGTTHHHHHHHHTSEEEEECCCTTSCEEEEEESCHH
T ss_pred CcCccchHHhhcceeEEEeccCCCCcEEEEEECCHH
Confidence 356778888888889999988888899999999854
No 82
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=21.23 E-value=83 Score=26.20 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=25.1
Q ss_pred CccchHHHHHHHHHHCCceEEEEEEEeeCCeeEEEEEE
Q 013535 338 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 375 (441)
Q Consensus 338 DrpGLL~~It~~l~~~~v~I~~A~i~T~g~~~~d~F~v 375 (441)
|-.|+++.|+..|++.||+|... +||. .|-.+|
T Consensus 74 ~~vGilA~is~pLA~agIsif~i--Sty~---tD~IlV 106 (134)
T 1zhv_A 74 DETGIVLSVISPLSTNGIGIFVV--STFD---GDHLLV 106 (134)
T ss_dssp SSCCHHHHHHHHHHTTTCCCEEE--ECSS---CEEEEE
T ss_pred cHHHHHHHHHHHHHhCCCCeEEE--Eecc---ccEEEE
Confidence 56899999999999999999754 4553 344445
No 83
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=20.77 E-value=2.2e+02 Score=21.79 Aligned_cols=52 Identities=15% Similarity=0.263 Sum_probs=37.7
Q ss_pred cchHHHHHHHHHHCCceEEEEEEEeeCCeeEEEEEEEcCCCCCCChHHHHHHHHHhc
Q 013535 340 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 396 (441)
Q Consensus 340 pGLL~~It~~l~~~~v~I~~A~i~T~g~~~~d~F~v~d~~g~~~~~~~~~~l~~~l~ 396 (441)
.-+++++++.| ...+||.++.|...++.....+.+.-. |. +...++..+.|.
T Consensus 37 ~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l~-G~---~~~~~~ai~~L~ 88 (100)
T 2qsw_A 37 LPIISHIVQEY-QVEVSIIQGNIQQTKQGAVGSLYIQLL-GE---EQNILAAIEGLR 88 (100)
T ss_dssp SCHHHHHHHHH-TCEEEEEEEEEEEETTEEEEEEEEEEE-SC---HHHHHHHHHHHH
T ss_pred chHHHHHHHHh-CCCEEEEEeeceEcCCeeEEEEEEEEE-CC---HHHHHHHHHHHH
Confidence 45788888887 588999999999999999999988543 43 233444444443
Done!