Query 013543
Match_columns 441
No_of_seqs 394 out of 2053
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 12:33:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013543.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013543hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 3.7E-84 1.3E-88 651.7 33.0 304 22-333 59-362 (363)
2 1pci_A Procaricain; zymogen, h 100.0 2.3E-82 8E-87 632.5 32.0 307 22-333 15-321 (322)
3 3qj3_A Cathepsin L-like protei 100.0 4.4E-81 1.5E-85 625.2 32.4 305 21-333 14-331 (331)
4 1by8_A Protein (procathepsin K 100.0 1.6E-80 5.6E-85 617.5 31.0 304 23-333 5-314 (314)
5 2c0y_A Procathepsin S; proenzy 100.0 1.5E-80 5E-85 618.1 29.2 304 22-333 5-315 (315)
6 3qt4_A Cathepsin-L-like midgut 100.0 2.8E-80 9.4E-85 618.3 30.8 302 22-333 20-329 (329)
7 1cs8_A Human procathepsin L; p 100.0 1.5E-79 5E-84 611.2 29.9 300 23-333 6-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 1.2E-78 4E-83 603.2 27.7 297 27-334 3-307 (310)
9 1xkg_A DER P I, major mite fec 100.0 2.6E-75 8.8E-80 578.8 27.7 287 28-334 7-303 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 3.5E-68 1.2E-72 548.5 23.8 279 44-332 135-434 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 3.7E-68 1.2E-72 530.6 17.8 278 47-336 2-315 (325)
12 1cqd_A Protein (protease II); 100.0 2.2E-64 7.5E-69 478.4 24.2 219 116-336 2-220 (221)
13 3p5u_A Actinidin; SAD, cystein 100.0 1.3E-64 4.6E-69 479.6 22.7 217 117-334 1-218 (220)
14 1s4v_A Cysteine endopeptidase; 100.0 2.4E-64 8.3E-69 480.6 23.5 223 116-338 1-224 (229)
15 2fo5_A Cysteine proteinase EP- 100.0 1.5E-64 5.2E-69 490.2 21.9 224 115-338 2-229 (262)
16 1ppo_A Protease omega; hydrola 100.0 6.2E-64 2.1E-68 473.7 24.1 215 117-333 1-215 (216)
17 1yal_A Chymopapain; hydrolase, 100.0 9.6E-64 3.3E-68 473.1 24.1 216 117-334 1-216 (218)
18 1iwd_A Ervatamin B; cysteine p 100.0 1E-63 3.6E-68 471.8 24.2 214 117-333 1-214 (215)
19 3pbh_A Procathepsin B; thiol p 100.0 1.5E-63 5.2E-68 496.1 21.7 262 56-332 11-313 (317)
20 3u8e_A Papain-like cysteine pr 100.0 2.6E-63 9E-68 471.3 20.9 214 117-334 1-220 (222)
21 2b1m_A SPE31; papain-like, sug 100.0 1.5E-62 5.3E-67 472.8 24.4 221 116-340 1-231 (246)
22 2cio_A Papain; hydrolase/inhib 100.0 1.8E-62 6E-67 462.5 23.8 211 117-333 1-211 (212)
23 2bdz_A Mexicain; cysteine prot 100.0 2.2E-62 7.5E-67 462.5 23.4 212 117-334 1-212 (214)
24 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.9E-62 6.7E-67 462.5 21.7 211 117-333 1-211 (213)
25 3kwz_A Cathepsin K; enzyme inh 100.0 5.8E-62 2E-66 459.9 24.3 212 117-333 1-215 (215)
26 1o0e_A Ervatamin C; plant cyst 100.0 4.1E-62 1.4E-66 458.7 22.9 207 117-333 1-207 (208)
27 3ovx_A Cathepsin S; hydrolase, 100.0 9.6E-62 3.3E-66 459.3 22.0 213 117-333 2-218 (218)
28 3f75_A Toxopain-2, cathepsin L 100.0 5.3E-62 1.8E-66 462.9 19.4 217 115-333 5-224 (224)
29 2xu3_A Cathepsin L1; hydrolase 100.0 2.4E-61 8.3E-66 457.2 23.6 212 117-333 1-220 (220)
30 2oul_A Falcipain 2; cysteine p 100.0 1.9E-61 6.4E-66 464.0 22.6 215 114-333 15-240 (241)
31 3bwk_A Cysteine protease falci 100.0 2.9E-61 1E-65 463.2 22.0 215 114-333 17-242 (243)
32 1m6d_A Cathepsin F, catsf; pap 100.0 1.4E-60 4.8E-65 450.2 23.1 208 117-333 1-213 (214)
33 3i06_A Cruzipain; autocatalyti 100.0 1.7E-60 5.8E-65 449.9 23.2 208 117-333 1-214 (215)
34 8pch_A Cathepsin H; hydrolase, 100.0 8.5E-61 2.9E-65 453.4 21.1 212 117-334 1-219 (220)
35 3f5v_A DER P 1 allergen; aller 100.0 1.9E-60 6.5E-65 451.7 20.1 210 115-333 8-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 2.2E-56 7.7E-61 434.8 20.9 212 115-334 5-258 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 4.8E-56 1.6E-60 429.7 20.5 210 116-332 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 1E-55 3.6E-60 432.1 19.3 214 114-333 33-275 (277)
39 2wbf_X Serine-repeat antigen p 100.0 4.8E-51 1.6E-55 397.0 22.6 211 119-334 9-262 (265)
40 3ois_A Cysteine protease; alph 100.0 2.4E-49 8.2E-54 390.0 14.0 233 70-315 13-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 1.7E-38 5.9E-43 325.7 17.2 196 116-314 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 2.3E-37 7.8E-42 317.7 19.3 206 116-332 52-423 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 2.3E-32 7.8E-37 275.0 19.9 181 128-314 21-356 (383)
44 2jye_A Granulin A; epithelin, 99.9 1.1E-25 3.6E-30 170.7 4.0 59 346-410 3-61 (72)
45 2jyv_A Granulin-2, granulin F; 99.9 2.4E-24 8.1E-29 163.4 1.3 61 346-413 3-64 (72)
46 2jyt_A Granulin-5, granulin C; 99.9 1.7E-23 5.9E-28 157.1 3.8 58 346-410 2-59 (69)
47 3f75_P Toxopain-2, cathepsin L 99.8 1.1E-18 3.8E-23 145.1 9.5 75 21-96 17-91 (106)
48 2l95_A Crammer, LP06209P; cyst 99.7 7.5E-18 2.6E-22 133.6 6.2 68 26-95 7-77 (80)
49 1fwo_A Oryzain beta chain; bet 99.5 2E-14 6.9E-19 93.4 2.6 34 347-380 2-35 (35)
50 1g26_A Granulin A, HGA; granul 99.1 9.2E-12 3.2E-16 79.2 0.4 31 346-381 1-31 (31)
51 1i8x_A Granulin-1; two beta-ha 99.0 3.8E-11 1.3E-15 75.3 1.1 29 347-380 2-30 (30)
52 1pxv_A Cysteine protease; hydr 96.8 0.012 4.2E-07 52.1 11.4 127 134-313 26-161 (183)
53 1x9y_A Cysteine proteinase; ha 96.5 0.038 1.3E-06 53.9 13.4 128 133-313 201-337 (367)
54 1cv8_A Staphopain; cysteine pr 96.2 0.067 2.3E-06 47.2 12.6 118 134-300 17-144 (174)
55 3erv_A Putative C39-like pepti 84.9 2.4 8.2E-05 39.5 7.7 63 230-299 126-196 (236)
56 3bb7_A Interpain A; cysteine p 40.1 46 0.0016 32.2 6.3 59 237-313 239-298 (321)
57 4d8b_A Streptopain; papain fol 38.5 43 0.0015 31.4 5.6 52 237-313 172-226 (261)
58 1omc_A Omega-conotoxin GVIA; p 37.4 16 0.00053 22.0 1.6 20 385-407 8-27 (28)
59 1dki_A Pyrogenic exotoxin B zy 36.9 57 0.0019 32.2 6.5 52 237-313 290-344 (371)
60 2jmv_A Scytovirin; protein, su 36.1 32 0.0011 26.0 3.4 9 370-378 79-87 (95)
61 1ntx_A Alpha-neurotoxin; NMR { 32.8 11 0.00036 27.2 0.3 26 370-400 33-59 (60)
62 2e4u_A Metabotropic glutamate 29.6 29 0.001 35.6 3.2 51 344-410 480-542 (555)
63 1ug4_A Cytotoxin 6, cardiotoxi 26.3 25 0.00086 25.1 1.4 47 349-400 8-60 (60)
64 1mr6_A Neurotoxin; venom; NMR 25.3 62 0.0021 23.4 3.5 47 349-400 11-67 (68)
65 1p1p_A AA-conotoxin PIVA; neur 24.7 45 0.0015 19.2 1.9 10 375-384 1-11 (26)
66 2h7z_B Irditoxin subunit B; th 24.6 50 0.0017 24.7 2.9 49 348-401 20-76 (77)
67 1cvo_A Cardiotoxin V; cytotoxi 24.2 35 0.0012 24.4 1.8 47 349-400 9-62 (62)
68 1vyc_A Bucain, neurotoxin; sna 22.9 68 0.0023 23.1 3.2 47 349-400 11-64 (65)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=3.7e-84 Score=651.74 Aligned_cols=304 Identities=43% Similarity=0.782 Sum_probs=271.2
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEecccCCCCChHHhhhhhcCcCCCccccc
Q 013543 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHD 101 (441)
Q Consensus 22 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~~~~~~ 101 (441)
++.+.++|++||++|+|+|.+.+|+.+||+||++|+++|++||++ +.+|++|+|+|+|||.|||++++++.........
T Consensus 59 ~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~-~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~~~ 137 (363)
T 3tnx_A 59 TERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTT 137 (363)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEECSCTTTTSCHHHHHHHHSCSSCSCCCCS
T ss_pred HHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEeccccccCCHHHHHHHhccccccccccc
Confidence 678899999999999999999999999999999999999999998 8899999999999999999999988665432211
Q ss_pred ccCCccccCCCCCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCC
Q 013543 102 RRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCG 181 (441)
Q Consensus 102 ~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~ 181 (441)
........ .....+||++||||++|+||||||||.||||||||++++||++++|+++.++.||||+|+||+. .+.||+
T Consensus 138 ~~~~~~~~-~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~-~~~GC~ 215 (363)
T 3tnx_A 138 ELSYEEVL-NDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDR-RSYGCN 215 (363)
T ss_dssp SSSSSCCC-CCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTB
T ss_pred cccccccc-CcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccC-CCCCCC
Confidence 11111111 1234579999999999999999999999999999999999999999999999999999999987 478999
Q ss_pred CCchHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEecccccccc
Q 013543 182 GGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQL 261 (441)
Q Consensus 182 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~ 261 (441)
||++..|++|+.+ .||++|++|||.+.++.|...........+.+|..++..++.+++.+|++|||+|+|++...+|++
T Consensus 216 GG~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~~~F~~ 294 (363)
T 3tnx_A 216 GGYPWSALQLVAQ-YGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQL 294 (363)
T ss_dssp CCCHHHHHHHHHH-TCBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCSHHHHT
T ss_pred CCChHHHHhHHHh-cCccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecchhhhC
Confidence 9999999999865 599999999999988888765555555678888888888999999999999999999988789999
Q ss_pred CCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 262 YSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 262 Y~sGIy~~~c~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
|++|||..+|++.+||||+|||||+ +|||||||||++|||+|||||+|+.++..|+|||++.|+||++
T Consensus 295 Y~sGVy~~~~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPik 362 (363)
T 3tnx_A 295 YRGGIFVGPCGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 362 (363)
T ss_dssp EEEEEECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEEC
T ss_pred CCCCEECCCCCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeeccc
Confidence 9999999999989999999999986 5999999999999999999999999888899999999999986
No 2
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=2.3e-82 Score=632.52 Aligned_cols=307 Identities=45% Similarity=0.852 Sum_probs=272.2
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEecccCCCCChHHhhhhhcCcCCCccccc
Q 013543 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHD 101 (441)
Q Consensus 22 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~~~~~~ 101 (441)
++++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.........
T Consensus 15 e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~~ 93 (322)
T 1pci_A 15 TERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQ 93 (322)
T ss_dssp HHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSCC
T ss_pred hHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhcCCCCcccccc
Confidence 567788999999999999998899999999999999999999997 7899999999999999999998887654321110
Q ss_pred ccCCccccCCCCCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCC
Q 013543 102 RRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCG 181 (441)
Q Consensus 102 ~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~ 181 (441)
.. ...+. .....+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.||+
T Consensus 94 ~~-~~~~~-~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~-~~~gC~ 170 (322)
T 1pci_A 94 SY-DEEFI-NEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCK 170 (322)
T ss_dssp CC-SEECC-CCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT-TSCGGG
T ss_pred cc-ccccc-cccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC-CCCCCC
Confidence 10 01111 1223579999999999999999999999999999999999999999999999999999999996 688999
Q ss_pred CCchHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEecccccccc
Q 013543 182 GGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQL 261 (441)
Q Consensus 182 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~ 261 (441)
||++..|++|+.++ ||++|++|||.+.++.|.........++|++|..|+.+++++|+++|++|||+|+|+++..+|++
T Consensus 171 GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~~~~f~~ 249 (322)
T 1pci_A 171 GGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQL 249 (322)
T ss_dssp CBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTTCHHHHT
T ss_pred CCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEecccccccc
Confidence 99999999999876 79999999999999999876433455789999999888899999999999999999997678999
Q ss_pred CCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 262 YSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 262 Y~sGIy~~~c~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
|++|||+++|++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||++.++||++
T Consensus 250 Y~~Gvy~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 250 YKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp EEEEEECCSCCSCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred cCCeEeCCCCCCCCCEEEEEEEEeccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 999999888988889999999999999999999999999999999999999987545679999999999986
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=4.4e-81 Score=625.21 Aligned_cols=305 Identities=39% Similarity=0.722 Sum_probs=268.9
Q ss_pred CchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEecccCCCCChHHhhhhhcCcCCCc
Q 013543 21 YCSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAAS 97 (441)
Q Consensus 21 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~~ 97 (441)
.+..+..+|++||++|+|+|.+.+|+.+|++||++|+++|++||++ ++.+|+||+|+|+|||.|||++++++.....
T Consensus 14 ~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~ 93 (331)
T 3qj3_A 14 PSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPA 93 (331)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCS
T ss_pred CCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhccccccc
Confidence 4677889999999999999999899999999999999999999985 5789999999999999999999988765432
Q ss_pred ccccccCCccccCC-----CCCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCC--cccCCHHHHH
Q 013543 98 IDHDRRRNASVQSP-----GNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGS--LVSLSEQELI 170 (441)
Q Consensus 98 ~~~~~~~~~~~~~~-----~~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~--~~~LSeq~lv 170 (441)
..... ...+... ....+||++||||++|+||||||||.||||||||++++||++++|+++. .++||||+|+
T Consensus 94 ~~~~~--~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~Lv 171 (331)
T 3qj3_A 94 DLHKN--GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLV 171 (331)
T ss_dssp STTTT--CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHH
T ss_pred ccccc--CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHh
Confidence 11100 1111101 0234799999999999999999999999999999999999999999998 8999999999
Q ss_pred hhcCCCCCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeE
Q 013543 171 DCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVS 249 (441)
Q Consensus 171 dc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~ 249 (441)
||+.. +.||+||++..|++|+.+++||++|++|||.+.++.|.... ....++|++|..++..++++|+++|++ |||+
T Consensus 172 dC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~ 249 (331)
T 3qj3_A 172 DCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDP-NQVAARLSGYVYLSGPDENMLADMVATKGPVA 249 (331)
T ss_dssp HHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCT-TSEEECCSEEEEESSCCHHHHHHHHHHHCCEE
T ss_pred hhccC-CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCc-ccceeEeeEEEEeCCCCHHHHHHHHHhCCCEE
Confidence 99974 88999999999999999888999999999999999998754 345678999999988889999999986 9999
Q ss_pred EEEeccccccccCCCceEeC-CCC-CCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcc
Q 013543 250 VGICGSERAFQLYSSGIFTG-PCS-TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINML 327 (441)
Q Consensus 250 v~i~~~~~~f~~Y~sGIy~~-~c~-~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~ 327 (441)
|+|++... |++|++|||.. .|. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++.
T Consensus 250 v~i~a~~~-f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~ 325 (331)
T 3qj3_A 250 VAFDADDP-FGSYSGGVYYNPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNAN---NHCGIAGV 325 (331)
T ss_dssp EEECCCTT-GGGEEEEEECCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTS
T ss_pred EEEEcccc-cccccCceEeCCCCCCCcCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEcCCC---CccCcCCc
Confidence 99999754 99999999965 575 47899999999999999999999999999999999999999863 59999999
Q ss_pred cccccc
Q 013543 328 ASYPTK 333 (441)
Q Consensus 328 ~~~p~~ 333 (441)
++||++
T Consensus 326 ~~~p~v 331 (331)
T 3qj3_A 326 ASVPTL 331 (331)
T ss_dssp CEEEEC
T ss_pred eeeeeC
Confidence 999974
No 4
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.6e-80 Score=617.47 Aligned_cols=304 Identities=43% Similarity=0.785 Sum_probs=265.8
Q ss_pred hhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEecccCCCCChHHhhhhhcCcCCCccc
Q 013543 23 SDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAASID 99 (441)
Q Consensus 23 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~~~~ 99 (441)
.++..+|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.+||++.+++.......
T Consensus 5 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 84 (314)
T 1by8_A 5 EILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH 84 (314)
T ss_dssp CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccc
Confidence 35778999999999999998899999999999999999999985 357999999999999999999888876543221
Q ss_pred ccccCCccccCCCCCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCC
Q 013543 100 HDRRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSG 179 (441)
Q Consensus 100 ~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~g 179 (441)
. . ....+........||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+. .+.|
T Consensus 85 ~-~-~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~~g 161 (314)
T 1by8_A 85 S-R-SNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDG 161 (314)
T ss_dssp C-C-SSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT-TSCG
T ss_pred c-c-CCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCC
Confidence 1 0 10112111112239999999999999999999999999999999999999999999999999999999996 5899
Q ss_pred CCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccc
Q 013543 180 CGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERA 258 (441)
Q Consensus 180 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~ 258 (441)
|+||++..|++|+.+++||++|++|||.+.++.|..... ...++|++|..++..++++||++|++ |||+|+|++...+
T Consensus 162 C~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~ 240 (314)
T 1by8_A 162 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTS 240 (314)
T ss_dssp GGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCGG-GCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred CcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCCc-cceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHH
Confidence 999999999999987889999999999999999986532 34578899999988889999999986 9999999997678
Q ss_pred cccCCCceEeCC-CCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 259 FQLYSSGIFTGP-CST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 259 f~~Y~sGIy~~~-c~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
|++|++|||+.+ |+. .++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++.++||++
T Consensus 241 f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 241 FQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 314 (314)
T ss_dssp HHTEEEECBCCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTEEEECCSSS---CGGGTTSSCEEECC
T ss_pred hhhccCceecCCCCCCCCCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCEEEEEcCCC---CcCCccCeeEEeeC
Confidence 999999999765 876 7899999999999999999999999999999999999999852 58999999999973
No 5
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1.5e-80 Score=618.10 Aligned_cols=304 Identities=41% Similarity=0.777 Sum_probs=265.7
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEecccCCCCChHHhhhhhcCcCCCcc
Q 013543 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAASI 98 (441)
Q Consensus 22 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~~~ 98 (441)
+..+..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.|||++.+++......
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 346788999999999999988889999999999999999999975 35899999999999999999988887654322
Q ss_pred cccccCCccccCCCCCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhc-CC-C
Q 013543 99 DHDRRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCD-RS-Y 176 (441)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~-~~-~ 176 (441)
.. ....+. .....+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+ .. .
T Consensus 85 ~~---~~~~~~-~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~ 160 (315)
T 2c0y_A 85 WQ---RNITYK-SNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYG 160 (315)
T ss_dssp GG---SCBCC-------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGT
T ss_pred cc---CCcccc-CcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccC
Confidence 11 111111 111246999999999999999999999999999999999999999999999999999999998 43 3
Q ss_pred CCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEecc
Q 013543 177 NSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGS 255 (441)
Q Consensus 177 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~ 255 (441)
+.||+||++..|++|+.+++||++|++|||.+..+.|.... ....++|++|..++..++++|+++|++ |||+|+|++.
T Consensus 161 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~ 239 (315)
T 2c0y_A 161 NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDAR 239 (315)
T ss_dssp CCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCC-cccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecC
Confidence 78999999999999998778999999999999999998653 345678999999987789999999986 9999999997
Q ss_pred ccccccCCCceEeCC-CCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 256 ERAFQLYSSGIFTGP-CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 256 ~~~f~~Y~sGIy~~~-c~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
..+|++|++|||+.+ |++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++.++||++
T Consensus 240 ~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 240 HPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 315 (315)
T ss_dssp SHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred chhhhccCCCcccCCCCCCcCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCCcEEEEEcCCC---CccCcCceeEEeeC
Confidence 678999999999765 8888899999999999999999999999999999999999999852 58999999999973
No 6
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=2.8e-80 Score=618.28 Aligned_cols=302 Identities=42% Similarity=0.778 Sum_probs=264.2
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEecccCCCCChHHhhhhhcCcCCCcc
Q 013543 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAASI 98 (441)
Q Consensus 22 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~~~ 98 (441)
+.++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ ++.+|+||+|+|+|||.|||++ +++..+...
T Consensus 20 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~~~ 98 (329)
T 3qt4_A 20 KSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKAQK 98 (329)
T ss_dssp CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCCC-
T ss_pred HHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCccccc
Confidence 567888999999999999999889999999999999999999984 5789999999999999999999 777553211
Q ss_pred ccccc-CCccccCCCCCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCC-C
Q 013543 99 DHDRR-RNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-Y 176 (441)
Q Consensus 99 ~~~~~-~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~-~ 176 (441)
..... ....+. ... .+||++||||++ +||||||||.||||||||++++||++++|+++.+++||||+|+||+.. .
T Consensus 99 ~~~~~~~~~~~~-~~~-~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g 175 (329)
T 3qt4_A 99 PKHPENLRMPYV-SSK-KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYG 175 (329)
T ss_dssp -----CCEEECC-CCC-SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGT
T ss_pred cccccccccccc-CCc-cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccccC
Confidence 11000 111122 112 479999999999 999999999999999999999999999999999999999999999974 3
Q ss_pred CCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEecc
Q 013543 177 NSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGS 255 (441)
Q Consensus 177 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~ 255 (441)
+.||+||++..|++|+.++ ||++|++|||.+.++.|.... ....++|++|..++..++++||++|++ |||+|+|++.
T Consensus 176 ~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~ 253 (329)
T 3qt4_A 176 NAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDS-SQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDAT 253 (329)
T ss_dssp CCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCG-GGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCc-ccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEecC
Confidence 7899999999999999887 999999999999999998654 345578999999988889999999986 9999999997
Q ss_pred ccccccCCCceEeC-CCC-CCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 256 ERAFQLYSSGIFTG-PCS-TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 256 ~~~f~~Y~sGIy~~-~c~-~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
. +|++|++|||.. .|. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++.++||++
T Consensus 254 ~-~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~yp~v 329 (329)
T 3qt4_A 254 D-ELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESGYWRQVRNYG---NNCGIATAASYPAL 329 (329)
T ss_dssp G-GGTTEEEEEECCSSCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTTTCEEEEC
T ss_pred h-hhhhccCceeecCCCCCCcCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCcEEEEEeCCC---CccCCCCceeEeeC
Confidence 4 999999999975 575 57899999999999999999999999999999999999999863 59999999999974
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=1.5e-79 Score=611.18 Aligned_cols=300 Identities=42% Similarity=0.847 Sum_probs=263.4
Q ss_pred hhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEecccCCCCChHHhhhhhcCcCCCccc
Q 013543 23 SDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAASID 99 (441)
Q Consensus 23 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~~~~ 99 (441)
+.+..+|++||++|+|+| +.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++..+....
T Consensus 6 ~~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~ 84 (316)
T 1cs8_A 6 HSLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR 84 (316)
T ss_dssp GGGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS
T ss_pred HHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc
Confidence 457789999999999999 7789999999999999999999975 468999999999999999999888876543211
Q ss_pred ccccCCccccCCCCCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCC-CC
Q 013543 100 HDRRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NS 178 (441)
Q Consensus 100 ~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~-~~ 178 (441)
. ...+. .....+||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+..+ +.
T Consensus 85 ~----~~~~~-~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 85 K----GKVFQ-EPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp C----CEECC-CCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred c----Ccccc-CccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 1 11122 112346999999999999999999999999999999999999999999999999999999998643 78
Q ss_pred CCCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEecccc
Q 013543 179 GCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSER 257 (441)
Q Consensus 179 gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~ 257 (441)
||+||++..|++|+.+++||++|++|||.+.++.|.... ....++|++|..|+. ++++||++|++ |||+|+|++...
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~ 237 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP-KYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHE 237 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCC-ccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCCh
Confidence 999999999999998778999999999999999998653 345678999999986 89999999986 999999999766
Q ss_pred ccccCCCceEeCC-CCC-CCCceEEEEEEe---ec-CCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccc
Q 013543 258 AFQLYSSGIFTGP-CST-SLDHAVLIVGYD---SE-NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYP 331 (441)
Q Consensus 258 ~f~~Y~sGIy~~~-c~~-~~~HaV~IVGyg---~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p 331 (441)
+|++|++|||+.+ |+. .++|||+||||| ++ +|++|||||||||++|||+|||||+|+.+ |.|||++.++||
T Consensus 238 ~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p 314 (316)
T 1cs8_A 238 SFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYP 314 (316)
T ss_dssp HHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEE
T ss_pred hhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCC---CccCccceeeEe
Confidence 8999999999765 875 789999999999 66 79999999999999999999999999863 589999999999
Q ss_pred cc
Q 013543 332 TK 333 (441)
Q Consensus 332 ~~ 333 (441)
++
T Consensus 315 ~~ 316 (316)
T 1cs8_A 315 TV 316 (316)
T ss_dssp CC
T ss_pred eC
Confidence 73
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=1.2e-78 Score=603.15 Aligned_cols=297 Identities=43% Similarity=0.832 Sum_probs=258.1
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEecccCCCCChHHhhhhhcC-cCCCcccccc
Q 013543 27 ELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLG-FSAASIDHDR 102 (441)
Q Consensus 27 ~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~~~s~~lg~N~FsDlt~eEf~~~~lg-~~~~~~~~~~ 102 (441)
.+|++||++|+|+|.+.+|+.+| .||++|+++|++||++ ++.+|++|+|+|+|||.|||++++++ .........
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~- 80 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILS- 80 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSC-
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcccccc-
Confidence 58999999999999988899999 9999999999999975 36899999999999999999988887 433221110
Q ss_pred cCCccccCCCCCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCC-CCCCC
Q 013543 103 RRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCG 181 (441)
Q Consensus 103 ~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~-~~gC~ 181 (441)
....+. ... .+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+..+ +.||+
T Consensus 81 -~~~~~~-~~~-~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~ 157 (310)
T 2o6x_A 81 -HGVPYE-ANN-RAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCG 157 (310)
T ss_dssp -SSEECC-C-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGG
T ss_pred -cCCccc-ccc-CCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCC
Confidence 111121 111 26999999999999999999999999999999999999999999999999999999998643 78999
Q ss_pred CCchHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccc
Q 013543 182 GGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQ 260 (441)
Q Consensus 182 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~ 260 (441)
||++..|++|+. ++||++|++|||.+.++.|.... ....++|.+|..|+..++++||++|++ |||+|+|++. .+|+
T Consensus 158 GG~~~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~ 234 (310)
T 2o6x_A 158 GGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNK-QLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDFM 234 (310)
T ss_dssp CCCHHHHHHHHT-TSCBCBTTTSCCCSSCCCCCCCG-GGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHHH
T ss_pred CCCHHHHHHHHH-HCCcCchhcCCCCCCCCCccCCC-CCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhhh
Confidence 999999999997 77999999999999999998653 234578999999987789999999986 9999999997 5899
Q ss_pred cCCCceEeC-CCCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccC
Q 013543 261 LYSSGIFTG-PCST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 334 (441)
Q Consensus 261 ~Y~sGIy~~-~c~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 334 (441)
+|++|||+. .|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++.++||++.
T Consensus 235 ~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~Cgi~~~~~~p~~~ 307 (310)
T 2o6x_A 235 MYRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRG---NMCGIASLASLPMVA 307 (310)
T ss_dssp TEEEEEECCSSCCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSEEEEEEE
T ss_pred hCCCceecCCCCCCCCCCEEEEEEEEeccCCceEEEEEeCCCCccCCCcEEEEEcCCC---CcCCccceeeEEEee
Confidence 999999974 5774 7899999999999999999999999999999999999999853 489999999999863
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=2.6e-75 Score=578.78 Aligned_cols=287 Identities=29% Similarity=0.499 Sum_probs=247.9
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEecccCCCCChHHhhhhhcCcCCCcccccccCCcc
Q 013543 28 LFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHDRRRNAS 107 (441)
Q Consensus 28 ~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~~~~~~~~~~~~ 107 (441)
+|++||++|+|.|.+.+|+.+|+.||++|+++|++ |+ . |+|+|+|||.|||++++++........... ..
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~--~-----g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~--~~ 76 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG--G-----AINHLSDLSLDEFKNRFLMSAEAFEHLKTQ--FD 76 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC--C-----CCCTTTTSCHHHHHHHHSBCHHHHHHHHHH--HC
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc--C-----CCCcccCCCHHHHHHHhcCCCCccccccCC--cc
Confidence 69999999999999889999999999999999999 74 1 999999999999999777733211100000 01
Q ss_pred ccCC----CCCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCC
Q 013543 108 VQSP----GNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGG 183 (441)
Q Consensus 108 ~~~~----~~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG 183 (441)
+... ....+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. ..||+||
T Consensus 77 ~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~GC~GG 154 (312)
T 1xkg_A 77 LNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS--QHGCHGD 154 (312)
T ss_dssp -----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCC
T ss_pred cccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC--CCCCCCC
Confidence 1100 012479999999999999999999999999999999999999999999999999999999982 2899999
Q ss_pred chHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh--CCeEEEEecccc-ccc
Q 013543 184 LMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA--QPVSVGICGSER-AFQ 260 (441)
Q Consensus 184 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~--gPV~v~i~~~~~-~f~ 260 (441)
++..|++|+.+ .||++|++|||.+..+.|. . .....++|++|..|+..++++||++|++ |||+|+|++... +|+
T Consensus 155 ~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~ 231 (312)
T 1xkg_A 155 TIPRGIEYIQH-NGVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFR 231 (312)
T ss_dssp CHHHHHHHHHH-HCEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHH
T ss_pred CHHHHHHHHHH-cCCCccccCCccCCCCCCC-C-CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccccccc
Confidence 99999999987 6999999999999999998 3 3345678999999987789999999986 899999999754 899
Q ss_pred cCCCceEeC-CCC-C-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccC
Q 013543 261 LYSSGIFTG-PCS-T-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 334 (441)
Q Consensus 261 ~Y~sGIy~~-~c~-~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 334 (441)
+|++|||+. .|. . . +|||+|||||+++|++|||||||||++|||+|||||+|+. +.|||++.++||++.
T Consensus 232 ~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~----n~CgI~~~~~~~~~~ 303 (312)
T 1xkg_A 232 HYDGRTIIQRDNGYQPN-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVILG 303 (312)
T ss_dssp TCCSSSCBCCCCSSCCE-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTCCEEEECT
T ss_pred ccCCcEEcCCCCCCCcC-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCC----CcccccceeEEeecc
Confidence 999999975 476 4 6 9999999999999999999999999999999999999984 489999999999865
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=3.5e-68 Score=548.45 Aligned_cols=279 Identities=29% Similarity=0.544 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCcEEEe-cccCCCCChHHhhhhhcCcCCCcccccccCCccccCCCCCCCCCCeee
Q 013543 44 QEKQQRLKIFEDNYAFVTQHNNMGNSSFTLS-LNAFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPGNLRDVPASID 122 (441)
Q Consensus 44 ~E~~~R~~iF~~Nl~~I~~~N~~~~~s~~lg-~N~FsDlt~eEf~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~lP~s~D 122 (441)
.|+.+|+.||++|+++|++||++ +.+|+++ +|+|+|||.|||++++++.......... ............+||++||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~-~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lP~s~D 212 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAI-QKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKP-APLTAEIQQKILFLPTSWD 212 (441)
T ss_dssp -------------------------------------------------------------------------CCCSCEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHcc-CCceEeecccccccCCHHHHHHHhCCCccccccccc-CccccccccccccCCCCEE
Confidence 46689999999999999999998 7899998 8999999999999988765432211000 0000000122457999999
Q ss_pred ccCCC---CCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcc--cCCHHHHHhhcCCCCCCCCCCchHHH-HHHHHHhC
Q 013543 123 WRKKG---AVTEVKDQASCGACWAFSATGAIEGINKIVTGSLV--SLSEQELIDCDRSYNSGCGGGLMDYA-YQFVIKNH 196 (441)
Q Consensus 123 wR~~g---~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~--~LSeq~lvdc~~~~~~gC~GG~~~~a-~~~~~~~~ 196 (441)
||+++ +|+||||||.||||||||++++||++++|+++..+ .||||+|+||+. .+.||+||++..+ ++|+.++
T Consensus 213 wR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~-~~~GC~GG~~~~aa~~yi~~~- 290 (441)
T 3pdf_A 213 WRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ-YAQGCEGGFPYLIAGKYAQDF- 290 (441)
T ss_dssp TTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHTTHHHHHT-
T ss_pred CCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc-CCCCCCCCchhHHHHHHHHhc-
Confidence 99964 89999999999999999999999999999998765 499999999996 5899999999987 8998665
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecC----CChHHHHHHHHH-hCCeEEEEeccccccccCCCceEeCCC
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVP----ENNEKQLLQAVV-AQPVSVGICGSERAFQLYSSGIFTGPC 271 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~----~~~~~~lk~al~-~gPV~v~i~~~~~~f~~Y~sGIy~~~c 271 (441)
||++|++|||.+.++.|..... ...+.+.+|..++ ..++++|+++|+ +|||+|+|++. ++|++|++|||..++
T Consensus 291 Gi~tE~~yPY~~~~~~C~~~~~-~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~~~ 368 (441)
T 3pdf_A 291 GLVEEACFPYTGTDSPCKMKED-CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHHTG 368 (441)
T ss_dssp CBCBGGGSCCCSSCCCSCCCSS-CCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECCC-
T ss_pred CCCcHHHeeecccCCCCCCccc-cceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEecCC
Confidence 9999999999999999986432 2334566777775 357889998887 59999999996 799999999997543
Q ss_pred C-------CCCCceEEEEEEeec--CCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccc
Q 013543 272 S-------TSLDHAVLIVGYDSE--NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPT 332 (441)
Q Consensus 272 ~-------~~~~HaV~IVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~ 332 (441)
. ..++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ .|||++.++++.
T Consensus 369 ~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n----~CGI~s~~~a~~ 434 (441)
T 3pdf_A 369 LRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTD----ECAIESIAVAAT 434 (441)
T ss_dssp --CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSC----GGGTTSCCEEEE
T ss_pred CCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCC----ccCCCCceEEee
Confidence 2 248999999999985 78999999999999999999999999864 899999988775
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=3.7e-68 Score=530.57 Aligned_cols=278 Identities=24% Similarity=0.439 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcEEEecc-cCCCCChHHhhhhhcCcCCCccc--ccccCCccccCCCCCCCCCCeeec
Q 013543 47 QQRLKIFEDNYAFVTQHNNMGNSSFTLSLN-AFADLTHQEFKASFLGFSAASID--HDRRRNASVQSPGNLRDVPASIDW 123 (441)
Q Consensus 47 ~~R~~iF~~Nl~~I~~~N~~~~~s~~lg~N-~FsDlt~eEf~~~~lg~~~~~~~--~~~~~~~~~~~~~~~~~lP~s~Dw 123 (441)
+.|...+.-|.++|++||++.+.+|++++| +|+|||.|||+++ ++..+.+.. .......... ....+||++|||
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~-~g~~~~~~~~~~~~~~~~~~~--~~~~~lP~s~Dw 78 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRL-NGVIKKNNNASILPKRRFTEE--EARAPLPSSFDS 78 (325)
T ss_dssp -------------------------------------------------------CCSCBCCCCHH--HHHCCCCSCEEH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHH-hCCCCCCcccccccCcccccc--ccccCCCCcEeh
Confidence 457788888999999999875689999999 8999999999886 454332211 0000001000 012579999999
Q ss_pred cCC----CCCCccccCCCCchhHHHHHHHHHhHhHHHhcCC-cccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhCCc
Q 013543 124 RKK----GAVTEVKDQASCGACWAFSATGAIEGINKIVTGS-LVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGI 198 (441)
Q Consensus 124 R~~----g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~-~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~Gi 198 (441)
|++ |+|+||||||.||||||||++++||++++|+++. .++||||+|+||+...+.||+||++..|++|+.++ ||
T Consensus 79 R~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi 157 (325)
T 3hhi_A 79 AEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GL 157 (325)
T ss_dssp HHHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CB
T ss_pred hHhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CC
Confidence 998 8999999999999999999999999999999997 89999999999997557899999999999999876 99
Q ss_pred CCCCCCCCC-CC----------CCCCCCC---------------cCCceeEeecceeecCCChHHHHHHHHH-hCCeEEE
Q 013543 199 DTEKDYPYR-GQ----------AGQCNKQ---------------KLNRHIVTIDGYKDVPENNEKQLLQAVV-AQPVSVG 251 (441)
Q Consensus 199 ~~e~~yPY~-~~----------~~~C~~~---------------~~~~~~~~i~~y~~v~~~~~~~lk~al~-~gPV~v~ 251 (441)
++|++|||. +. .+.|... ......+.+.+|. + .++++||++|+ +|||+|+
T Consensus 158 ~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~ 234 (325)
T 3hhi_A 158 VSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVA 234 (325)
T ss_dssp CBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEE
T ss_pred CcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEE
Confidence 999999998 32 2556510 0012234566776 5 67899999987 5999999
Q ss_pred EeccccccccCCCceEeCCCCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccc
Q 013543 252 ICGSERAFQLYSSGIFTGPCST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASY 330 (441)
Q Consensus 252 i~~~~~~f~~Y~sGIy~~~c~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~ 330 (441)
|++. ++|++|++|||..++.. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.+++
T Consensus 235 i~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~----n~CGI~~~~~~ 309 (325)
T 3hhi_A 235 FDVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGS----SECGIEDGGSA 309 (325)
T ss_dssp EEEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCEEE
T ss_pred EEec-cccccccCceecCCCCCCCCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCC----CeecCccceEE
Confidence 9996 78999999999877665 459999999999999999999999999999999999999986 48999999988
Q ss_pred cccCCC
Q 013543 331 PTKTGQ 336 (441)
Q Consensus 331 p~~~~~ 336 (441)
++..-+
T Consensus 310 g~p~~~ 315 (325)
T 3hhi_A 310 GIPLAP 315 (325)
T ss_dssp EEEC--
T ss_pred eecCCC
Confidence 775433
No 12
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=2.2e-64 Score=478.40 Aligned_cols=219 Identities=55% Similarity=1.068 Sum_probs=200.9
Q ss_pred CCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHh
Q 013543 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKN 195 (441)
Q Consensus 116 ~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~ 195 (441)
+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+.. +.||+||++..|++|+.++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC-CCCCCCCCHHHHHHHHHHh
Confidence 589999999999999999999999999999999999999999999999999999999863 7899999999999999888
Q ss_pred CCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCC
Q 013543 196 HGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSL 275 (441)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~ 275 (441)
+||++|++|||.+..+.|..... ...++|++|..++.+++++||++|++|||+|+|++...+|++|++|||+.+|...+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~ 159 (221)
T 1cqd_A 81 GGINSEETYPYRGQDGICNSTVN-APVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISA 159 (221)
T ss_dssp TSBCBTTTSCCCSSCCCCCSSSC-CCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCcCCCCC-CceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCcC
Confidence 89999999999999899986543 45678999999988889999999999999999998767899999999998888889
Q ss_pred CceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccCCC
Q 013543 276 DHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQ 336 (441)
Q Consensus 276 ~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~ 336 (441)
+|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||++.++
T Consensus 160 ~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~ 220 (221)
T 1cqd_A 160 NHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVKKGT 220 (221)
T ss_dssp CEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC--
T ss_pred CeEEEEEEEcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEecCC
Confidence 9999999999999999999999999999999999999987555679999999999997643
No 13
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=1.3e-64 Score=479.57 Aligned_cols=217 Identities=57% Similarity=1.058 Sum_probs=201.4
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCC-CCCCCCCchHHHHHHHHHh
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQFVIKN 195 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~-~~gC~GG~~~~a~~~~~~~ 195 (441)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+... +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999999999999999754 7899999999999999988
Q ss_pred CCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCC
Q 013543 196 HGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSL 275 (441)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~ 275 (441)
+||++|++|||.+.++.|.........++|++|..++.+++++|+++|.+|||+|+|++..++|++|++|||+.+|...+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 89999999999999999986544445578899999988889999999988999999999767899999999998898889
Q ss_pred CceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccC
Q 013543 276 DHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 334 (441)
Q Consensus 276 ~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 334 (441)
+|||+|||||+++|++|||||||||++|||+|||||+|+.+ ..|.|||++.++||++.
T Consensus 161 ~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~-~~~~Cgi~~~~~~p~~~ 218 (220)
T 3p5u_A 161 DHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVG-GVGQCGIAKKASYPVKY 218 (220)
T ss_dssp CEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCC-TTCGGGTTSSCEEEECS
T ss_pred ceEEEEEEEecCCCceEEEEECCCCCCcccCCEEEEECCCC-CCCccCcccccceEEEe
Confidence 99999999999999999999999999999999999999975 45699999999999864
No 14
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=2.4e-64 Score=480.56 Aligned_cols=223 Identities=57% Similarity=1.044 Sum_probs=204.0
Q ss_pred CCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHh
Q 013543 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKN 195 (441)
Q Consensus 116 ~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~ 195 (441)
+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+...+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999996458899999999999999887
Q ss_pred CCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCC
Q 013543 196 HGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSL 275 (441)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~ 275 (441)
+||++|++|||.+..+.|.........++|++|..++.+++++|+++|++|||+|+|++...+|++|++|||+.+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~~ 160 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTEL 160 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCCC
Confidence 89999999999999899986533345678999999988889999999999999999999667899999999988888888
Q ss_pred CceEEEEEEeecC-CeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccCCCCC
Q 013543 276 DHAVLIVGYDSEN-GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNP 338 (441)
Q Consensus 276 ~HaV~IVGyg~~~-g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~~p 338 (441)
+|||+|||||+++ |++|||||||||++|||+|||||+|+.+...|.|||++.++||++..+.|
T Consensus 161 ~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~~~ 224 (229)
T 1s4v_A 161 DHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSNN 224 (229)
T ss_dssp CEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECCSSCC
T ss_pred CeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEecCCCC
Confidence 9999999999987 99999999999999999999999999765567999999999999776544
No 15
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=1.5e-64 Score=490.19 Aligned_cols=224 Identities=56% Similarity=1.042 Sum_probs=203.6
Q ss_pred CCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHH
Q 013543 115 RDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIK 194 (441)
Q Consensus 115 ~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~ 194 (441)
.+||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+...+.||+||++..|++|+.+
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999645889999999999999988
Q ss_pred hCCcCCCCCCCCCCCCCCCCCCc--CCce-eEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCC
Q 013543 195 NHGIDTEKDYPYRGQAGQCNKQK--LNRH-IVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPC 271 (441)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~C~~~~--~~~~-~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c 271 (441)
++||++|++|||.+..+.|.... .... .++|++|..++.+++++|+++|++|||+|+|++..++|++|++|||+.+|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c 161 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGEC 161 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred cCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCC
Confidence 77999999999999999998643 1334 67899999998888999999999999999999976789999999999888
Q ss_pred CCCCCceEEEEEEeec-CCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccCCCCC
Q 013543 272 STSLDHAVLIVGYDSE-NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNP 338 (441)
Q Consensus 272 ~~~~~HaV~IVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~~p 338 (441)
++.++|||+|||||++ +|++|||||||||++|||+|||||+|+.++..|+|||++.++||+...+.|
T Consensus 162 ~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~~~~~~ 229 (262)
T 2fo5_A 162 GTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKP 229 (262)
T ss_dssp CCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEECCC---
T ss_pred CCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEecCCCC
Confidence 8888999999999988 599999999999999999999999999876678999999999999887766
No 16
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=6.2e-64 Score=473.72 Aligned_cols=215 Identities=53% Similarity=0.999 Sum_probs=199.4
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAKN- 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999986 57899999999999999877
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCCC
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLD 276 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~ 276 (441)
||++|++|||.+..+.|.........++|++|..++.+++++||++|++|||+|+|++..++|++|++|||+++|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (216)
T 1ppo_A 79 GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVD 158 (216)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCCC
T ss_pred CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCCC
Confidence 79999999999998999865433456789999999888899999999999999999997678999999999888888889
Q ss_pred ceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 277 HAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 277 HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||++.++||++
T Consensus 159 HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 159 HAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred EEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 999999999999999999999999999999999999987555679999999999985
No 17
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=9.6e-64 Score=473.05 Aligned_cols=216 Identities=52% Similarity=0.966 Sum_probs=199.7
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYVANN- 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 6999999999999999999999999999999999999999999999999999999984 58899999999999999877
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCCC
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLD 276 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~ 276 (441)
||++|++|||.+.++.|.........++|++|..++.+++++|+++|++|||+|+|++..++|++|++|||+++|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (218)
T 1yal_A 79 GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLD 158 (218)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCCC
Confidence 79999999999998999875443456789999999888899999999999999999997678999999999888888889
Q ss_pred ceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccC
Q 013543 277 HAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 334 (441)
Q Consensus 277 HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 334 (441)
|||+|||||+++|++|||||||||++|||+|||||+|+.++..|.|||++.++||++.
T Consensus 159 HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 216 (218)
T 1yal_A 159 HAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKG 216 (218)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEECC
T ss_pred EEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEEe
Confidence 9999999999999999999999999999999999999875456799999999999864
No 18
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=1e-63 Score=471.80 Aligned_cols=214 Identities=54% Similarity=1.067 Sum_probs=198.6
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT-ASHGCNGGWMNNAFQYIITNG 79 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999986 378999999999999998878
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCCC
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLD 276 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~ 276 (441)
|+++|++|||.+.++.|.... ...++|++|..++.+++++||++|++|||+|+|++...+|++|++|||+.+|++.++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~ 157 (215)
T 1iwd_A 80 GIDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQN 157 (215)
T ss_dssp CBCBTTTSCCCSSCCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCCC
T ss_pred CcccccccCccCCCCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcCC
Confidence 999999999999989998654 356788999999888899999999999999999997558999999999888888889
Q ss_pred ceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 277 HAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 277 HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||++.++||++
T Consensus 158 HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 158 HGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEEEeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 999999999999999999999999999999999999987555579999999999974
No 19
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=1.5e-63 Score=496.11 Aligned_cols=262 Identities=28% Similarity=0.489 Sum_probs=210.0
Q ss_pred HHHHHHHhccCCCCcEEEecccCCCCChHHhhhhhcCcCCCcccccccCCccccCCCCCCCCCCeeeccCC----CCCCc
Q 013543 56 NYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPGNLRDVPASIDWRKK----GAVTE 131 (441)
Q Consensus 56 Nl~~I~~~N~~~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~----g~vtp 131 (441)
+.++|++||++ +.+|++++| |+|+|.||++. ++|..+...... ..+. .....+||++||||++ +.|+|
T Consensus 11 ~~~~i~~~N~~-~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~~----~~~~-~~~~~~lP~s~DwR~~~~~c~~vtp 82 (317)
T 3pbh_A 11 SDELVNYVNKR-NTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKPP----QRVM-FTEDLKLPASFDAREQWPQCPTIKE 82 (317)
T ss_dssp CHHHHHHHHHH-TCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCCS----EEEC-CCSCCCCCSSEEHHHHCTTCGGGTC
T ss_pred cHHHHHHHHCC-CCCeEEeec-cccCCHHHHHH-HcCCCCCccccC----cccc-cccccCCCCCEechhccCCCCCcCC
Confidence 46789999987 889999999 99888877655 467654332110 1111 1123679999999987 68999
Q ss_pred cccCCCCchhHHHHHHHHHhHhHHHhcCC--cccCCHHHHHhhcC-CCCCCCCCCchHHHHHHHHHhCCcCCCCCC----
Q 013543 132 VKDQASCGACWAFSATGAIEGINKIVTGS--LVSLSEQELIDCDR-SYNSGCGGGLMDYAYQFVIKNHGIDTEKDY---- 204 (441)
Q Consensus 132 VkdQg~cGsCwAfa~~~~lE~~~~i~~~~--~~~LSeq~lvdc~~-~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y---- 204 (441)
|||||.||||||||++++||++++|+++. .++||||+|+||+. ..+.||+||++..|++|+.++ ||++|.+|
T Consensus 83 VkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~ 161 (317)
T 3pbh_A 83 IRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHV 161 (317)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCC
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCC
Confidence 99999999999999999999999999874 79999999999986 457899999999999999876 99999999
Q ss_pred ---CCCC---------CCCCCCCCcCC----------ce------eEeecceeecCCChHHHHHHHHH-hCCeEEEEecc
Q 013543 205 ---PYRG---------QAGQCNKQKLN----------RH------IVTIDGYKDVPENNEKQLLQAVV-AQPVSVGICGS 255 (441)
Q Consensus 205 ---PY~~---------~~~~C~~~~~~----------~~------~~~i~~y~~v~~~~~~~lk~al~-~gPV~v~i~~~ 255 (441)
||.. ..+.|...... .. ......+..++ .++++||++|+ +|||+|+|++.
T Consensus 162 ~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~~ 240 (317)
T 3pbh_A 162 GCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSVY 240 (317)
T ss_dssp BSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEEE
T ss_pred CCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEec
Confidence 9984 34456421000 00 00111223454 46889999887 59999999996
Q ss_pred ccccccCCCceEeCCCCCC-CCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccc
Q 013543 256 ERAFQLYSSGIFTGPCSTS-LDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPT 332 (441)
Q Consensus 256 ~~~f~~Y~sGIy~~~c~~~-~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~ 332 (441)
++|++|++|||..+|+.. ++|||+|||||+++|++|||||||||++|||+|||||+|+.+ .|||++.++..+
T Consensus 241 -~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~n----~CgI~~~~~a~~ 313 (317)
T 3pbh_A 241 -SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQD----HCGIESEVVAGI 313 (317)
T ss_dssp -GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSC----GGGTTTSCEECC
T ss_pred -ccccCCCCcEEccCCCCCCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCCC----cccCCCceEeee
Confidence 799999999998887764 499999999999999999999999999999999999999864 899999887654
No 20
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=2.6e-63 Score=471.33 Aligned_cols=214 Identities=56% Similarity=1.052 Sum_probs=193.5
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+.. +.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX-XXXXXGGDADDAFRWVITNG 79 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHHHHHT
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc-ccccCCCCHHHHHHHHHHcC
Confidence 79999999999999999999999999999999999999999999999999999999974 89999999999999998888
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCC-ceEeC-CCCC-
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSS-GIFTG-PCST- 273 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~s-GIy~~-~c~~- 273 (441)
||++|++|||.+.++.|...... .++|++|..++ .++++|+++|++|||+|+|++...+|++|++ |||+. +|..
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~ 156 (222)
T 3u8e_A 80 GIASDANYPYTGVDGTCDLNKPI--AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDD 156 (222)
T ss_dssp CBCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCC
T ss_pred CccchhcCCCcccCCccccCCCC--eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCC
Confidence 99999999999999999875433 67889999998 7899999999889999999997668999999 99977 6776
Q ss_pred --CCCceEEEEEEeecC-CeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccC
Q 013543 274 --SLDHAVLIVGYDSEN-GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 334 (441)
Q Consensus 274 --~~~HaV~IVGyg~~~-g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 334 (441)
.++|||+|||||+++ |++|||||||||++|||+|||||+|+.++..|+|||++.++||++.
T Consensus 157 ~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~~ 220 (222)
T 3u8e_A 157 PATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTKS 220 (222)
T ss_dssp GGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEECC
T ss_pred CCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEEe
Confidence 689999999999988 9999999999999999999999999987677899999999999854
No 21
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.5e-62 Score=472.77 Aligned_cols=221 Identities=51% Similarity=0.944 Sum_probs=197.8
Q ss_pred CCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHh
Q 013543 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKN 195 (441)
Q Consensus 116 ~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~ 195 (441)
+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD-ESEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSBTTTBCCHHHHHHHHHHT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986 57899999999999999887
Q ss_pred CCcCCCCCCCCCCCCCCCCCCcCCceeEeecce---eecCCChHHHHHHHHHh----CCeEEEEeccccccccCCCceEe
Q 013543 196 HGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGY---KDVPENNEKQLLQAVVA----QPVSVGICGSERAFQLYSSGIFT 268 (441)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y---~~v~~~~~~~lk~al~~----gPV~v~i~~~~~~f~~Y~sGIy~ 268 (441)
+||++|++|||.+.++.|.... ....++|++| ..++.+++++||++|++ |||+|+|++ ++|++|++|||+
T Consensus 80 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~ 156 (246)
T 2b1m_A 80 GGIASEADYPYKARDGKCKANE-IQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYD 156 (246)
T ss_dssp TCBCBTTTSCCCSSCCCCCGGG-CCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEEC
T ss_pred CCcCccccccccCCCCcCcCCC-CCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeec
Confidence 7999999999999989998653 2345688899 88887789999999987 999999998 689999999997
Q ss_pred C-CCCCC--CCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccCCCCCCC
Q 013543 269 G-PCSTS--LDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNPPP 340 (441)
Q Consensus 269 ~-~c~~~--~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~~pp~ 340 (441)
. .|+.. ++|||+|||||+++|++|||||||||++|||+|||||+|+.++..|.|||++.++||+...+.|+.
T Consensus 157 ~~~c~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~~~~~~~~ 231 (246)
T 2b1m_A 157 GGNCSSPYGINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIEKSETLK 231 (246)
T ss_dssp CTTCCSSCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEECCC-----
T ss_pred CCCCCCCCcCceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEecCCCCCC
Confidence 6 68765 899999999999999999999999999999999999999875556799999999999987654443
No 22
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.8e-62 Score=462.49 Aligned_cols=211 Identities=50% Similarity=0.916 Sum_probs=194.6
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR-RSYGCNGGYPWSALQLVAQY- 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHT-
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999986 58899999999999999876
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCCC
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLD 276 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~ 276 (441)
||++|++|||.+..+.|.........++|++|..++.+++++|+++|++|||+|+|++...+|++|++|||+.+|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~~ 158 (212)
T 2cio_A 79 GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD 158 (212)
T ss_dssp CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCCC
Confidence 89999999999998999875433456789999999887899999999999999999997568999999999888888889
Q ss_pred ceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 277 HAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 277 HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||++.++||+.
T Consensus 159 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 159 HAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred EEEEEEEecC----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 9999999998 8999999999999999999999997555679999999999984
No 23
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=2.2e-62 Score=462.46 Aligned_cols=212 Identities=51% Similarity=0.990 Sum_probs=196.8
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~- 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER-RSHGCDGGYQTTSLQYVVDN- 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999996 57899999999999999887
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCCC
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLD 276 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~ 276 (441)
||++|++|||.+..+.|.........++|++|..++.+++++||++|++|||+|+|++..++|++|++|||+.+|.+.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (214)
T 2bdz_A 79 GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTD 158 (214)
T ss_dssp CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCCC
Confidence 99999999999998999876544567889999999888899999999999999999997678999999999888888899
Q ss_pred ceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccC
Q 013543 277 HAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 334 (441)
Q Consensus 277 HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 334 (441)
|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||++.++||+..
T Consensus 159 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 212 (214)
T 2bdz_A 159 HAVTAVGYGK----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIKG 212 (214)
T ss_dssp EEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEECC
T ss_pred eEEEEEEcCC----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEec
Confidence 9999999997 89999999999999999999999875555799999999999864
No 24
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.9e-62 Score=462.54 Aligned_cols=211 Identities=53% Similarity=0.994 Sum_probs=196.4
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER-RSYGCRGGFPLYALQYVANS- 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 7999999999999999999999999999999999999999999999999999999997 58899999999999999887
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCCC
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLD 276 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~ 276 (441)
||++|++|||.+..+.|.........++|++|..++.+++++|+++|.+|||+|+|++..++|+.|++|||+.+|.+.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 158 (213)
T 3ioq_A 79 GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSID 158 (213)
T ss_dssp CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCccC
Confidence 99999999999999999875545567889999999888888899999899999999997678999999999888888899
Q ss_pred ceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 277 HAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 277 HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||++.++||++
T Consensus 159 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 159 HAVAAVGYGN----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp EEEEEEEEET----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred ceEEEEecCC----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 9999999996 7999999999999999999999997655679999999999985
No 25
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=5.8e-62 Score=459.89 Aligned_cols=212 Identities=51% Similarity=0.942 Sum_probs=195.3
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNR 79 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999997 588999999999999998888
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccccCCCceEeC-CCC-C
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTG-PCS-T 273 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~-~c~-~ 273 (441)
||++|++|||.+.++.|.... .....++.+|..++..++++||++|++ |||+|+|++..++|++|++|||.. .|. .
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 158 (215)
T 3kwz_A 80 GIDSEDAYPYVGQEESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD 158 (215)
T ss_dssp CEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTT
T ss_pred CccccccCCCccCCCccccCC-CCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCC
Confidence 999999999999999998654 345678999999987789999999986 999999999767899999999964 464 4
Q ss_pred CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 274 SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 274 ~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
.++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||++.++||++
T Consensus 159 ~~~HaV~iVGyg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 159 NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred hhhCEEEEEEEeccCCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 7899999999999999999999999999999999999999864 58999999999974
No 26
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=4.1e-62 Score=458.65 Aligned_cols=207 Identities=57% Similarity=1.094 Sum_probs=191.9
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK-KNHGCLGGAFVFAYQYIINNG 79 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999999999999999986 588999999999999998877
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCCCCC
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLD 276 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~ 276 (441)
|+++|++|||.+.++.|.. ....++|++|..++.+++++||++|++|||+|+|++...+|++|++|||+.+|++.++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~ 156 (208)
T 1o0e_A 80 GIDTQANYPYKAVQGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLN 156 (208)
T ss_dssp CBCBTTTSCCCSSCCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCccCCCCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcCC
Confidence 9999999999999899976 2345688999999877899999999999999999997568999999999888888889
Q ss_pred ceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 277 HAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 277 HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
|||+|||||+ +|||||||||++|||+|||||+|+.+ .|.|||++.++||+.
T Consensus 157 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 157 HGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTK 207 (208)
T ss_dssp EEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEEC
T ss_pred EEEEEEEeCC----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeec
Confidence 9999999997 89999999999999999999999863 358999999999985
No 27
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=9.6e-62 Score=459.31 Aligned_cols=213 Identities=47% Similarity=0.943 Sum_probs=195.8
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhc-CC-CCCCCCCCchHHHHHHHHH
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCD-RS-YNSGCGGGLMDYAYQFVIK 194 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~-~~-~~~gC~GG~~~~a~~~~~~ 194 (441)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+ .. .+.||+||++..|++|+++
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 32 3789999999999999988
Q ss_pred hCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccccCCCceEeC-CCC
Q 013543 195 NHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTG-PCS 272 (441)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~-~c~ 272 (441)
++|+++|++|||.+.++.|.... .....++.+|..++..++++||++|++ |||+|+|++..++|++|++|||.. .|.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCcccccCccCCCCcccCCC-ccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 78999999999999999998654 345678899999987789999999986 999999999767899999999965 577
Q ss_pred CCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 273 TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 273 ~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++.++||++
T Consensus 161 ~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 218 (218)
T ss_dssp SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred cccCcEEEEEEEeccCCceEEEEECCCCCccccCCEEEEecCCC---CcccccCceeeeeC
Confidence 78999999999999999999999999999999999999999863 59999999999974
No 28
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=5.3e-62 Score=462.86 Aligned_cols=217 Identities=47% Similarity=0.947 Sum_probs=198.8
Q ss_pred CCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCC-CCCCCCCchHHHHHHHH
Q 013543 115 RDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQFVI 193 (441)
Q Consensus 115 ~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~-~~gC~GG~~~~a~~~~~ 193 (441)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+... +.||+||++..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999998643 78999999999999998
Q ss_pred HhCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCCC
Q 013543 194 KNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCST 273 (441)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~ 273 (441)
+++||++|++|||.+.++.|..... ....+|.+|..++..++++|+++|++|||+|+|++..++|++|++|||++.|..
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~ 163 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQSC-EKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGT 163 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGGGS-CCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCC
T ss_pred HhCCccccccCCCcCCCCCCCcCCC-CceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCC
Confidence 8779999999999999999986543 344678999999888899999999999999999997668999999999988888
Q ss_pred CCCceEEEEEEeec--CCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 274 SLDHAVLIVGYDSE--NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 274 ~~~HaV~IVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
.++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ ..|.|||++.++||+.
T Consensus 164 ~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 164 DLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKG-EEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSC-TTCGGGTTSSCEEEEC
T ss_pred ccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCC-CCCcCcccCceeeeeC
Confidence 89999999999998 89999999999999999999999999873 3469999999999973
No 29
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=2.4e-61 Score=457.23 Aligned_cols=212 Identities=49% Similarity=0.985 Sum_probs=193.1
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCC-CCCCCCCchHHHHHHHHHh
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQFVIKN 195 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~-~~gC~GG~~~~a~~~~~~~ 195 (441)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||||+|+||+..+ +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999999999999999644 7899999999999999767
Q ss_pred CCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccccCCCceEeCC-CCC
Q 013543 196 HGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGP-CST 273 (441)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~-c~~ 273 (441)
.|+++|++|||.+.++.|...+ ....++|++|..++. ++++||++|++ |||+|+|++..++|++|++|||+.+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~ 158 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNP-KYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS 158 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCG-GGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS
T ss_pred CCcccccccCCcccCcCccCCC-CCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC
Confidence 7999999999999989998653 345678999999986 78999999986 9999999997568999999999765 775
Q ss_pred -CCCceEEEEEEe----ecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 274 -SLDHAVLIVGYD----SENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 274 -~~~HaV~IVGyg----~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
.++|||+||||| +++|++|||||||||++|||+|||||+|+.+ +.|||++.++||++
T Consensus 159 ~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 220 (220)
T ss_dssp SCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred CCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceeeeC
Confidence 789999999999 6778999999999999999999999999863 48999999999973
No 30
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=1.9e-61 Score=464.04 Aligned_cols=215 Identities=39% Similarity=0.767 Sum_probs=196.5
Q ss_pred CCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHH
Q 013543 114 LRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVI 193 (441)
Q Consensus 114 ~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~ 193 (441)
..+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.||+||++..|++|+.
T Consensus 15 ~~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~-~~~gC~GG~~~~a~~yi~ 93 (241)
T 2oul_A 15 ENFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF-KNYGCNGGLINNAFEDMI 93 (241)
T ss_dssp CCCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT-TSCTTBCBCHHHHHHHHH
T ss_pred cccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHH
Confidence 3579999999999999999999999999999999999999999999999999999999986 378999999999999998
Q ss_pred HhCCcCCCCCCCCCCCCCC-CCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCC
Q 013543 194 KNHGIDTEKDYPYRGQAGQ-CNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS 272 (441)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~ 272 (441)
++.|+++|++|||.+..+. |.... ....++|++|..++..++++||++| |||+|+|++. .+|++|++|||+..|+
T Consensus 94 ~~~Gi~~e~~yPY~~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~ 169 (241)
T 2oul_A 94 ELGGICPDGDYPYVSDAPNLCNIDR-CTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECG 169 (241)
T ss_dssp HTTSBCBTTSSCCCTTSCCCCCTTS-SSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBC
T ss_pred HhCCcCccccCCCcCCCCCcCCCCC-CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCC
Confidence 8679999999999998888 98643 2345789999999877899999999 9999999996 7899999999987787
Q ss_pred CCCCceEEEEEEeecC----------CeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 273 TSLDHAVLIVGYDSEN----------GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 273 ~~~~HaV~IVGyg~~~----------g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
..++|||+|||||+++ |++|||||||||++|||+|||||+|+.++..|.|||++.++||++
T Consensus 170 ~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 170 DQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp SSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 7789999999999886 889999999999999999999999998765567999999999985
No 31
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=2.9e-61 Score=463.22 Aligned_cols=215 Identities=37% Similarity=0.747 Sum_probs=196.4
Q ss_pred CCCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHH
Q 013543 114 LRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVI 193 (441)
Q Consensus 114 ~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~ 193 (441)
..+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.||+||++..|++|+.
T Consensus 17 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~-~~~gC~GG~~~~a~~y~~ 95 (243)
T 3bwk_A 17 AKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSV-KNNGCYGGYITNAFDDMI 95 (243)
T ss_dssp CCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCT-TSCGGGCCCHHHHHHHHH
T ss_pred cccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHH
Confidence 4579999999999999999999999999999999999999999999999999999999986 378999999999999998
Q ss_pred HhCCcCCCCCCCCCCCCCC-CCCCcCCceeEeecceeecCCChHHHHHHHHHhCCeEEEEeccccccccCCCceEeCCCC
Q 013543 194 KNHGIDTEKDYPYRGQAGQ-CNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS 272 (441)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sGIy~~~c~ 272 (441)
+++|+++|++|||.+..+. |..... ...++|++|..++..++++||++| |||+|+|++. .+|+.|++|||+..|+
T Consensus 96 ~~~Gi~~e~~yPY~~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~ 171 (243)
T 3bwk_A 96 DLGGLCSQDDYPYVSNLPETCNLKRC-NERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGECG 171 (243)
T ss_dssp HTTSBCBTTTSCCCTTSCCCCCGGGC-SSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCCC
T ss_pred HhCCcccccccCCcCCCCCcCCCCCC-ccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCCC
Confidence 8779999999999998888 986432 345788999999887899999999 9999999996 7899999999987887
Q ss_pred CCCCceEEEEEEeecC----------CeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 273 TSLDHAVLIVGYDSEN----------GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 273 ~~~~HaV~IVGyg~~~----------g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
..++|||+|||||+++ |++|||||||||++|||+|||||+|+.++..|.|||++.++||++
T Consensus 172 ~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 172 AAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp SSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 6799999999999886 889999999999999999999999998755566999999999975
No 32
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=1.4e-60 Score=450.19 Aligned_cols=208 Identities=44% Similarity=0.836 Sum_probs=188.0
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (441)
||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~i~~~~ 79 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK-MDKACMGGLPSNAYSAIKNLG 79 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999986 478999999999999998877
Q ss_pred CcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccccCCCceEeC---CCC
Q 013543 197 GIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTG---PCS 272 (441)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~---~c~ 272 (441)
||++|++|||.+....|..... ...+.+.++..++. ++++||++|++ |||+|+|++. .|++|++|||+. .|+
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~ 155 (214)
T 1m6d_A 80 GLETEDDYSYQGHMQSCQFSAE-KAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCS 155 (214)
T ss_dssp CBCBTTTSCCCSSCCCCCCCGG-GCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSC
T ss_pred CcccccCcCcCCCCCcCCCCcc-cceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCC
Confidence 9999999999998899986543 23456888888874 78899999874 9999999985 599999999975 365
Q ss_pred C-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 273 T-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 273 ~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 156 ~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 156 PWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVV 213 (214)
T ss_dssp TTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEEC
T ss_pred CCcCCEEEEEEEEeecCCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEe
Confidence 4 579999999999999999999999999999999999999985 48999999999985
No 33
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.7e-60 Score=449.90 Aligned_cols=208 Identities=40% Similarity=0.803 Sum_probs=185.9
Q ss_pred CCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHh-
Q 013543 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKN- 195 (441)
Q Consensus 117 lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~- 195 (441)
||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK-TDSGCSGGLMNNAFEWIVQEN 79 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS-SSCGGGCCCHHHHHHHHHHHS
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC-CCCCCCCCCHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999986 47899999999999999875
Q ss_pred -CCcCCCCCCCCCCCCC---CCCCCcCCceeEeecceeecCCChHHHHHHHHH-hCCeEEEEeccccccccCCCceEeCC
Q 013543 196 -HGIDTEKDYPYRGQAG---QCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVV-AQPVSVGICGSERAFQLYSSGIFTGP 270 (441)
Q Consensus 196 -~Gi~~e~~yPY~~~~~---~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~-~gPV~v~i~~~~~~f~~Y~sGIy~~~ 270 (441)
+|+++|++|||....+ .|.... ....++|.+|..++. ++++||++|+ +|||+|+|++ ++|++|++|||+..
T Consensus 80 ~gGi~~e~~yPY~~~~~~~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~--~~f~~Y~~Giy~~~ 155 (215)
T 3i06_A 80 NGAVYTEDSYPYASGEGISPPCTTSG-HTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA--SSWMTYTGGVMTSC 155 (215)
T ss_dssp TTEEEC-CCSCCCCTTSCCCCCCCSS-CCEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECC--TTGGGCCSSEECSC
T ss_pred cccccccCccCCcCCCCCCCccccCC-cccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEc--hHHhcCCCCcccCC
Confidence 5799999999987544 687543 234578899999974 7889999997 5999999998 48999999999854
Q ss_pred CCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 271 CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 271 c~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
....++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 156 ~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~----n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 156 VSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAVV 214 (215)
T ss_dssp CCSCCCEEEEEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSS----CGGGTTSSEEEEEE
T ss_pred CCCccCcEEEEEEEeccCCcEEEEEECCCCCCcccCceEEEecCC----CeecCCCceeEEec
Confidence 455789999999999999999999999999999999999999986 48999999999975
No 34
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=8.5e-61 Score=453.43 Aligned_cols=212 Identities=45% Similarity=0.933 Sum_probs=193.3
Q ss_pred CCCeeeccCCC-CCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCC-CCCCCCCCchHHHHHHHHH
Q 013543 117 VPASIDWRKKG-AVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-YNSGCGGGLMDYAYQFVIK 194 (441)
Q Consensus 117 lP~s~DwR~~g-~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~-~~~gC~GG~~~~a~~~~~~ 194 (441)
||++||||++| +|+||||||.||||||||++++||++++|++++.++||||+|+||+.. .+.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 999999999999999999999999999999999999999999999863 3789999999999999988
Q ss_pred hCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccccCCCceEeC-CCC
Q 013543 195 NHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTG-PCS 272 (441)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~-~c~ 272 (441)
++|+++|++|||.+..+.|.... ....+++.+|..++..++++||++|++ |||+|+|++. .+|+.|++|||+. .|.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQP-DKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG-GGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCCCCCCCCCC-CcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 88999999999999999998654 345678899999988889999999985 9999999997 5899999999965 454
Q ss_pred C---CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccccC
Q 013543 273 T---SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 334 (441)
Q Consensus 273 ~---~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 334 (441)
. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||++.++||+..
T Consensus 159 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPIPL 219 (220)
T ss_dssp CSTTTCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEEC
T ss_pred CCCCcCCcEEEEEEEEccCCeeEEEEECCCCcCcccCCEEEEEcCC----CccccCCCceeEeec
Confidence 3 589999999999999999999999999999999999999986 489999999999853
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.9e-60 Score=451.69 Aligned_cols=210 Identities=31% Similarity=0.545 Sum_probs=191.4
Q ss_pred CCCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHH
Q 013543 115 RDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIK 194 (441)
Q Consensus 115 ~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~ 194 (441)
.+||++||||++|+|+||||||.||||||||++++||+++.+++++.++||||+|+||+. +.||+||++..|++|+.+
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~ 85 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYIQH 85 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999999999999999999997 899999999999999987
Q ss_pred hCCcCCCCCCCCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh--CCeEEEEecc-ccccccCCCceEe-CC
Q 013543 195 NHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA--QPVSVGICGS-ERAFQLYSSGIFT-GP 270 (441)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~--gPV~v~i~~~-~~~f~~Y~sGIy~-~~ 270 (441)
+ |+++|++|||.+..+.|. ......+++.+|..++..++++||++|++ |||+|+|.+. .++|++|++|||. ..
T Consensus 86 ~-Gi~~e~~yPY~~~~~~C~--~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~ 162 (222)
T 3f5v_A 86 N-GVVQESYYRYVAREQSCR--RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRD 162 (222)
T ss_dssp H-CEEBGGGSCCCSSCCCCC--CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCC
T ss_pred c-CCCchhhCCCcccCCCcc--CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCC
Confidence 6 999999999999989998 23456678999999987889999999987 8999999984 3689999999874 33
Q ss_pred C-CCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCcccccccc
Q 013543 271 C-STSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 333 (441)
Q Consensus 271 c-~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 333 (441)
+ ...++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.++||+.
T Consensus 163 ~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 163 NGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 222 (222)
T ss_dssp CSSSCEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEC
T ss_pred CCCCccCcEEEEEEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEeC
Confidence 3 45789999999999999999999999999999999999999985 48999999999973
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=2.2e-56 Score=434.78 Aligned_cols=212 Identities=31% Similarity=0.585 Sum_probs=178.0
Q ss_pred CCCCCeeeccCC----CCCCccccCCCCchhHHHHHHHHHhHhHHHhcC--CcccCCHHHHHhhcCC-CCCCCCCCchHH
Q 013543 115 RDVPASIDWRKK----GAVTEVKDQASCGACWAFSATGAIEGINKIVTG--SLVSLSEQELIDCDRS-YNSGCGGGLMDY 187 (441)
Q Consensus 115 ~~lP~s~DwR~~----g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~--~~~~LSeq~lvdc~~~-~~~gC~GG~~~~ 187 (441)
.+||++||||++ +.|+||||||.||||||||++++||++++|+++ ..++||||+|+||+.. .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 479999999987 789999999999999999999999999999875 4789999999999863 368999999999
Q ss_pred HHHHHHHhCCcCC-------CCCCCCC---------CCCCCCCCCc-------------C----CceeEeecceeecCCC
Q 013543 188 AYQFVIKNHGIDT-------EKDYPYR---------GQAGQCNKQK-------------L----NRHIVTIDGYKDVPEN 234 (441)
Q Consensus 188 a~~~~~~~~Gi~~-------e~~yPY~---------~~~~~C~~~~-------------~----~~~~~~i~~y~~v~~~ 234 (441)
|++|+.++ |+++ |++|||. +..+.|.... . ..+.+.+. +..++ .
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~-~~~v~-~ 161 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYN-SYSVS-N 161 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSC-CEECC-S
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeee-eEEeC-C
Confidence 99999775 9999 9999998 3345563210 0 00112233 33455 5
Q ss_pred hHHHHHHHHHh-CCeEEEEeccccccccCCCceEeCCCCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEE
Q 013543 235 NEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQ 312 (441)
Q Consensus 235 ~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~ 312 (441)
++++||++|++ |||+|+|++. .+|+.|++|||+.+|.. .++|||+|||||+++|++|||||||||++|||+|||||+
T Consensus 162 ~~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~ 240 (266)
T 3cbj_A 162 SEKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKIL 240 (266)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred CHHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCEEEEE
Confidence 78899999875 9999999986 68999999999877665 359999999999999999999999999999999999999
Q ss_pred ecCCCCcCccCcCccccccccC
Q 013543 313 RNTGNSLGICGINMLASYPTKT 334 (441)
Q Consensus 313 r~~~~~~~~CgI~~~~~~p~~~ 334 (441)
|+. +.|||++.+++++..
T Consensus 241 rg~----n~cgI~~~~~~~~p~ 258 (266)
T 3cbj_A 241 RGQ----DHCGIESEVVAGIPR 258 (266)
T ss_dssp CSS----CGGGTTTSCEECCBC
T ss_pred cCC----CcccccCceEEEEee
Confidence 985 489999999987753
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=4.8e-56 Score=429.73 Aligned_cols=210 Identities=33% Similarity=0.643 Sum_probs=175.1
Q ss_pred CCCCeeeccCC----CCCCccccCCCCchhHHHHHHHHHhHhHHHhcC--CcccCCHHHHHhhcCCCCCCCCCCchHHHH
Q 013543 116 DVPASIDWRKK----GAVTEVKDQASCGACWAFSATGAIEGINKIVTG--SLVSLSEQELIDCDRSYNSGCGGGLMDYAY 189 (441)
Q Consensus 116 ~lP~s~DwR~~----g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~--~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~ 189 (441)
+||++||||++ ++|+||||||.||||||||++++||++++|+++ ..++||||+|+||+...+.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 58999999998 689999999999999999999999999999976 689999999999987567899999999999
Q ss_pred HHHHHhCCcCCCCCC-------CCC---------CCCCCCCCCc----------C---CceeEe----ecceeecCCChH
Q 013543 190 QFVIKNHGIDTEKDY-------PYR---------GQAGQCNKQK----------L---NRHIVT----IDGYKDVPENNE 236 (441)
Q Consensus 190 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~C~~~~----------~---~~~~~~----i~~y~~v~~~~~ 236 (441)
+|++++ ||++|++| ||. +..+.|.... . ...... ......++ .++
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-NDE 159 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SCH
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-CcH
Confidence 999876 99999998 996 3444553210 0 000000 01112344 478
Q ss_pred HHHHHHHH-hCCeEEEEeccccccccCCCceEeCCCCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEec
Q 013543 237 KQLLQAVV-AQPVSVGICGSERAFQLYSSGIFTGPCST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRN 314 (441)
Q Consensus 237 ~~lk~al~-~gPV~v~i~~~~~~f~~Y~sGIy~~~c~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~ 314 (441)
++||++|+ +|||+|+|++. .+|++|++|||..++.. .++|||+|||||+++|++|||||||||++|||+|||||+|+
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~rg 238 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYFRIVRG 238 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECS
T ss_pred HHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeEEEEcC
Confidence 89999987 59999999986 78999999999876654 45999999999999999999999999999999999999998
Q ss_pred CCCCcCccCcCccccccc
Q 013543 315 TGNSLGICGINMLASYPT 332 (441)
Q Consensus 315 ~~~~~~~CgI~~~~~~p~ 332 (441)
. |.|||++.++..+
T Consensus 239 ~----n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 239 R----DECSIESEVTAGR 252 (254)
T ss_dssp S----CGGGTTSSEEEEE
T ss_pred C----CeecCCCceEeec
Confidence 6 4899999887654
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1e-55 Score=432.14 Aligned_cols=214 Identities=26% Similarity=0.580 Sum_probs=182.9
Q ss_pred CCCCCCeeeccCC---CCCCccccCC---CCchhHHHHHHHHHhHhHHHhcC-C--cccCCHHHHHhhcCCCCCCCCCCc
Q 013543 114 LRDVPASIDWRKK---GAVTEVKDQA---SCGACWAFSATGAIEGINKIVTG-S--LVSLSEQELIDCDRSYNSGCGGGL 184 (441)
Q Consensus 114 ~~~lP~s~DwR~~---g~vtpVkdQg---~cGsCwAfa~~~~lE~~~~i~~~-~--~~~LSeq~lvdc~~~~~~gC~GG~ 184 (441)
..+||++||||++ ++|+|||||| .||||||||++++||++++|+++ . .++||||+|+||+. +.||+||+
T Consensus 33 ~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~~gC~GG~ 110 (277)
T 1deu_A 33 PADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--AGSCEGGN 110 (277)
T ss_dssp GGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--SEETBEEC
T ss_pred cccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--CCCCCCCC
Confidence 4579999999998 6899999999 99999999999999999999875 3 47999999999986 48999999
Q ss_pred hHHHHHHHHHhCCcCCCCCCCCCCCCCCCCC-Cc-------------CCceeEeecceeecCCChHHHHHHHHH-hCCeE
Q 013543 185 MDYAYQFVIKNHGIDTEKDYPYRGQAGQCNK-QK-------------LNRHIVTIDGYKDVPENNEKQLLQAVV-AQPVS 249 (441)
Q Consensus 185 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~-~~-------------~~~~~~~i~~y~~v~~~~~~~lk~al~-~gPV~ 249 (441)
+..|++|+.++ ||++|++|||.+.++.|.. .. .....+++.+|..++ ++++||++|+ +|||+
T Consensus 111 ~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV~ 187 (277)
T 1deu_A 111 DLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPIS 187 (277)
T ss_dssp HHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCEE
Confidence 99999999765 9999999999998888873 11 112345677787775 4778888886 59999
Q ss_pred EEEeccccccccCCCceEeCC-CCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCC---C-CcCccCc
Q 013543 250 VGICGSERAFQLYSSGIFTGP-CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTG---N-SLGICGI 324 (441)
Q Consensus 250 v~i~~~~~~f~~Y~sGIy~~~-c~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---~-~~~~CgI 324 (441)
|+|++. .+|+.|++|||+.+ +...++|||+|||||+++|++|||||||||++|||+|||||+|+.+ . ....|||
T Consensus 188 v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cgI 266 (277)
T 1deu_A 188 CGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAI 266 (277)
T ss_dssp EEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTTT
T ss_pred EEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCccccccccccee
Confidence 999986 68999999999765 4456899999999999999999999999999999999999999864 0 0127999
Q ss_pred Ccccccccc
Q 013543 325 NMLASYPTK 333 (441)
Q Consensus 325 ~~~~~~p~~ 333 (441)
++.++|++.
T Consensus 267 e~~~~~~~p 275 (277)
T 1deu_A 267 EEHCTFGDP 275 (277)
T ss_dssp TSCEEEEEE
T ss_pred ccccEeecc
Confidence 999999874
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=4.8e-51 Score=397.03 Aligned_cols=211 Identities=25% Similarity=0.451 Sum_probs=165.9
Q ss_pred CeeeccCC-CCCC--ccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCCC-CCCCCCCchHHH-HHHHH
Q 013543 119 ASIDWRKK-GAVT--EVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYA-YQFVI 193 (441)
Q Consensus 119 ~s~DwR~~-g~vt--pVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~~-~~gC~GG~~~~a-~~~~~ 193 (441)
.-.|||++ |+++ ||||||.||||||||++++||++++|+++..++||||+|+||+... +.||+||.+..+ +.|+.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 35899999 6877 9999999999999999999999999999999999999999999643 789999975555 56666
Q ss_pred HhCCcCCCCCCCCCCC--CCCCCCCcC----------------CceeEeecceeecCCC----h----HHHHHHHHHh-C
Q 013543 194 KNHGIDTEKDYPYRGQ--AGQCNKQKL----------------NRHIVTIDGYKDVPEN----N----EKQLLQAVVA-Q 246 (441)
Q Consensus 194 ~~~Gi~~e~~yPY~~~--~~~C~~~~~----------------~~~~~~i~~y~~v~~~----~----~~~lk~al~~-g 246 (441)
+++||++|++|||.+. .+.|..... ....+++++|..++.. + +++||++|++ |
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 6766999999999863 467865321 1122456777766542 3 4688998875 9
Q ss_pred CeEEEEeccccccccCC-CceE-eCCCCC-CCCceEEEEEEeec---CC--eeEEEEEcCCCCCCCCCcEEEEEecCCCC
Q 013543 247 PVSVGICGSERAFQLYS-SGIF-TGPCST-SLDHAVLIVGYDSE---NG--VDYWIIKNSWGRSWGMNGYMHMQRNTGNS 318 (441)
Q Consensus 247 PV~v~i~~~~~~f~~Y~-sGIy-~~~c~~-~~~HaV~IVGyg~~---~g--~~yWivkNSWG~~WGe~GY~~i~r~~~~~ 318 (441)
||+|+|++. +|+.|+ +|++ ...|+. .++|||+|||||++ +| ++|||||||||++|||+|||||+|+..
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~-- 244 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGP-- 244 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCC--
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCC--
Confidence 999999974 577774 4433 345765 68999999999985 66 689999999999999999999998532
Q ss_pred cCccCc---CccccccccC
Q 013543 319 LGICGI---NMLASYPTKT 334 (441)
Q Consensus 319 ~~~CgI---~~~~~~p~~~ 334 (441)
+.||| .+.+.||+..
T Consensus 245 -n~Cgi~~~~~~~~~~~~~ 262 (265)
T 2wbf_X 245 -THCHFNFIHSVVIFNVDL 262 (265)
T ss_dssp -TTCSSCSCCEEEEECEEC
T ss_pred -CccCcceeEEEEeccccC
Confidence 58995 5566666544
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=2.4e-49 Score=389.99 Aligned_cols=233 Identities=21% Similarity=0.275 Sum_probs=176.8
Q ss_pred cEEEecccCCCCChHHhhhhhcCcCCCcccccccCCccccCCC-CCCCCCCeeeccCCCCCCccccCCCCchhHHHHHHH
Q 013543 70 SFTLSLNAFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPG-NLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATG 148 (441)
Q Consensus 70 s~~lg~N~FsDlt~eEf~~~~lg~~~~~~~~~~~~~~~~~~~~-~~~~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~ 148 (441)
...-..|++.++..|.|+.. +|..++.+.... ..+.++. ...+||++||||+++ ||||||.||||||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd---~~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~ 85 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSG-YGYIPDIADIRD---FSYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAA 85 (291)
T ss_dssp ----------CCCCCCCCTT-CCEECCCCCTTC---CBCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHH
T ss_pred CcccchhhHhHhhhcccccc-CCCCCCCCcccc---cccCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHH
Confidence 44457789999999998776 677765543211 1122111 124799999999984 999999999999999999
Q ss_pred HHhHhHHHhcCCcccCCHHHHH--hhcCC--C-CCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCC---CCCCCC----
Q 013543 149 AIEGINKIVTGSLVSLSEQELI--DCDRS--Y-NSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQA---GQCNKQ---- 216 (441)
Q Consensus 149 ~lE~~~~i~~~~~~~LSeq~lv--dc~~~--~-~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~C~~~---- 216 (441)
+||+++. +++..+.||+|+|+ +|... . ..+|.||++..|++|+.++ ||++|++|||.+.+ +.|...
T Consensus 86 alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~ 163 (291)
T 3ois_A 86 AIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAP 163 (291)
T ss_dssp HHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCG
T ss_pred HHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCcccccccccccccc
Confidence 9998875 56778899999998 67631 2 3468899999999999776 99999999999873 345431
Q ss_pred ---c------CCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccccCCC--ceEeCC-CCC--CCCceEEE
Q 013543 217 ---K------LNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSS--GIFTGP-CST--SLDHAVLI 281 (441)
Q Consensus 217 ---~------~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~s--GIy~~~-c~~--~~~HaV~I 281 (441)
. .....++|.+|..|+. ++++|+++|++ |||+|+|++. ++|+.|++ |||..+ |.. .++|||+|
T Consensus 164 ~~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~i 241 (291)
T 3ois_A 164 ASKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLC 241 (291)
T ss_dssp GGSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEE
T ss_pred ccCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEE
Confidence 0 0123467889999975 78999999986 7999999987 68999998 999754 333 35899999
Q ss_pred EEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecC
Q 013543 282 VGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNT 315 (441)
Q Consensus 282 VGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~ 315 (441)
|||| ++++|||||||||++|||+|||||+|+.
T Consensus 242 VGy~--~~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 242 VGYD--DEIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EEEE--TTTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred EEEe--CCCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 9998 4578999999999999999999999974
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.7e-38 Score=325.71 Aligned_cols=196 Identities=19% Similarity=0.284 Sum_probs=152.2
Q ss_pred CCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHh-cCCcccCCH----------------HHHHhhcCC---
Q 013543 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIV-TGSLVSLSE----------------QELIDCDRS--- 175 (441)
Q Consensus 116 ~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~-~~~~~~LSe----------------q~lvdc~~~--- 175 (441)
..|..|+++....++||+|||+||+|||||+++++|+.++++ +++.+.||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 356678888888899999999999999999999999999998 578899999 999999853
Q ss_pred ----------CCCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCC---------------------------C------C
Q 013543 176 ----------YNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQA---------------------------G------Q 212 (441)
Q Consensus 176 ----------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 212 (441)
.+.||+||.+..++.|+.+ +||++++.|||.... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~k-yGl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEK-YGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHH-cCccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 2689999999999999965 699999999998631 1 1
Q ss_pred ----------------C----------CCC-cC---------Cc-----e--eE--eeccee------------------
Q 013543 213 ----------------C----------NKQ-KL---------NR-----H--IV--TIDGYK------------------ 229 (441)
Q Consensus 213 ----------------C----------~~~-~~---------~~-----~--~~--~i~~y~------------------ 229 (441)
| ... +. .. . .. .+++|.
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 3 110 00 00 0 00 233333
Q ss_pred ---------------ecCCChH-HHHHHHHHh-CCeEEEEeccccccccCCCceEeCCCC--------------------
Q 013543 230 ---------------DVPENNE-KQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCS-------------------- 272 (441)
Q Consensus 230 ---------------~v~~~~~-~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~-------------------- 272 (441)
+++..+. +.++.+|+. |||++++++.. +.++++|||+..+.
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 3332222 445567776 79999999974 44569999976542
Q ss_pred ---CCCCceEEEEEEe--ec-CCe-eEEEEEcCCCCCCCCCcEEEEEec
Q 013543 273 ---TSLDHAVLIVGYD--SE-NGV-DYWIIKNSWGRSWGMNGYMHMQRN 314 (441)
Q Consensus 273 ---~~~~HaV~IVGyg--~~-~g~-~yWivkNSWG~~WGe~GY~~i~r~ 314 (441)
+..+|||+||||| .+ +|+ +|||||||||++||++|||+|+|+
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 3579999999999 65 787 999999999999999999999986
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=2.3e-37 Score=317.69 Aligned_cols=206 Identities=19% Similarity=0.242 Sum_probs=144.6
Q ss_pred CCCCeeeccCCCCCCccccCCCCchhHHHHHHHHHhHhHHHh-cCCcccCCH----------------HHHHhhcCC---
Q 013543 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIV-TGSLVSLSE----------------QELIDCDRS--- 175 (441)
Q Consensus 116 ~lP~s~DwR~~g~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~-~~~~~~LSe----------------q~lvdc~~~--- 175 (441)
..|..|+++..+.+|||||||.||+|||||+++++|+.++++ +++.++||+ |+|+||+..
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 356678888888899999999999999999999999999998 788999999 788999752
Q ss_pred --------CCCCCCCCchHHHHHHHHHhCCcCCCCCCCC-CCC---------------------------------C---
Q 013543 176 --------YNSGCGGGLMDYAYQFVIKNHGIDTEKDYPY-RGQ---------------------------------A--- 210 (441)
Q Consensus 176 --------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~--- 210 (441)
.+.||+||.+..++.|+.+ +||++|+.||| +.. .
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~k-yGivpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~ 210 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKK-YGLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIV 210 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHH-cCccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHH
Confidence 3789999999999999855 59999999999 311 0
Q ss_pred ------------------CCCCC----Cc----------------CC--------------------------ceeEeec
Q 013543 211 ------------------GQCNK----QK----------------LN--------------------------RHIVTID 226 (441)
Q Consensus 211 ------------------~~C~~----~~----------------~~--------------------------~~~~~i~ 226 (441)
+.++. .- .. .+.+.+.
T Consensus 211 ~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve 290 (457)
T 2e01_A 211 TLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKID 290 (457)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEe
Confidence 01111 00 00 0001110
Q ss_pred -------c----eeecCCChH-HHHHHHHHh-CCeEEEEeccccccccCCCceEeCCC---------------------C
Q 013543 227 -------G----YKDVPENNE-KQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPC---------------------S 272 (441)
Q Consensus 227 -------~----y~~v~~~~~-~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c---------------------~ 272 (441)
+ |.++|.... +.++.+|+. |||++++++. .|++|++|||+..+ .
T Consensus 291 ~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~ 368 (457)
T 2e01_A 291 RLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHE 368 (457)
T ss_dssp TCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTS
T ss_pred ccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCC
Confidence 1 344442221 445667776 7999999996 37789999997654 2
Q ss_pred CCCCceEEEEEEeec-CCe--eEEEEEcCCCCCCCCCcEEEEEecCCCCcCccCcCccccccc
Q 013543 273 TSLDHAVLIVGYDSE-NGV--DYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPT 332 (441)
Q Consensus 273 ~~~~HaV~IVGyg~~-~g~--~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~ 332 (441)
+..+|||+|||||.+ +|+ +|||||||||++||++|||+|+|+ .|...+.+++
T Consensus 369 s~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~--------wf~ey~~~iv 423 (457)
T 2e01_A 369 SLMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK--------YFEEYCFQIV 423 (457)
T ss_dssp CCCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH--------HHHHHEEEEE
T ss_pred CCCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh--------hHhhccEEEE
Confidence 467999999999975 788 999999999999999999999986 5555555444
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=2.3e-32 Score=274.99 Aligned_cols=181 Identities=23% Similarity=0.291 Sum_probs=133.8
Q ss_pred CCCccccCCCCchhHHHHHHHHHhHhHHHhcCCcccCCHHHHHhhcCC-----------CCCCCCCCchHHHHHHHHHhC
Q 013543 128 AVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-----------YNSGCGGGLMDYAYQFVIKNH 196 (441)
Q Consensus 128 ~vtpVkdQg~cGsCwAfa~~~~lE~~~~i~~~~~~~LSeq~lvdc~~~-----------~~~gC~GG~~~~a~~~~~~~~ 196 (441)
.++||||||+||+|||||+++++|+.+++++++.+.||+|+|++|+.. .+.||+||.+..|+.|+.+.
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 489999999999999999999999999999999999999999999741 25799999999999999765
Q ss_pred CcCCCCCCC------CCCCCC-------------C-C---CCC------cC-----------------C------ceeE-
Q 013543 197 GIDTEKDYP------YRGQAG-------------Q-C---NKQ------KL-----------------N------RHIV- 223 (441)
Q Consensus 197 Gi~~e~~yP------Y~~~~~-------------~-C---~~~------~~-----------------~------~~~~- 223 (441)
||+++++|| +...+. . . ... +. . .+.+
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 221100 0 0 000 00 0 0000
Q ss_pred ----------eecc----------------------------eeecCCChHHHHHH----HHHhC-CeEEEEeccccccc
Q 013543 224 ----------TIDG----------------------------YKDVPENNEKQLLQ----AVVAQ-PVSVGICGSERAFQ 260 (441)
Q Consensus 224 ----------~i~~----------------------------y~~v~~~~~~~lk~----al~~g-PV~v~i~~~~~~f~ 260 (441)
..+. |.++| .+.|++ +|..| ||..+-+++...|.
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp---~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~ 256 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLP---LDEFMEVFDNAINTGYTIAWGSDVSESGFT 256 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECC---HHHHHHHHHHHHHTTCCEEEEEECCSTTBC
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcC---HHHHHHHHHHHHHcCCcEEEEcccCccccC
Confidence 0111 12232 344444 45566 99999999855565
Q ss_pred cCCCceEeCC-----------------------------------------------CCCCCCceEEEEEEee-cCCeeE
Q 013543 261 LYSSGIFTGP-----------------------------------------------CSTSLDHAVLIVGYDS-ENGVDY 292 (441)
Q Consensus 261 ~Y~sGIy~~~-----------------------------------------------c~~~~~HaV~IVGyg~-~~g~~y 292 (441)
+.||...+ -.+..+|||+|||||. ++|++|
T Consensus 257 --~~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~y 334 (383)
T 3pw3_A 257 --RDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEY 334 (383)
T ss_dssp --TTSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEE
T ss_pred --CCceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceE
Confidence 88887311 0124579999999996 578999
Q ss_pred EEEEcCCCCCCCCCcEEEEEec
Q 013543 293 WIIKNSWGRSWGMNGYMHMQRN 314 (441)
Q Consensus 293 WivkNSWG~~WGe~GY~~i~r~ 314 (441)
||||||||++||++|||+|+++
T Consensus 335 w~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 335 YMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEEECSBCSCSTTTTEEEEEHH
T ss_pred EEEEeCCCCCCCcCCeEEecHH
Confidence 9999999999999999999875
No 44
>2jye_A Granulin A; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens}
Probab=99.91 E-value=1.1e-25 Score=170.75 Aligned_cols=59 Identities=41% Similarity=1.077 Sum_probs=56.6
Q ss_pred CcCCCCceeeCCCCccccccCCCCccccccccCCCCceecCCCCcccCCCCCcccCCCCceecCC
Q 013543 346 PTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRL 410 (441)
Q Consensus 346 p~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~~a~cc~d~~~ccp~~~~~c~~~~~~c~~~~ 410 (441)
+++||++++||+++|||++.++. ||||||++||||+|+.||||+|| +||++.|+|++++
T Consensus 3 ~v~Cd~~~~Cp~~~TCC~~~~g~-----wgCCPl~~AvCC~D~~hCCP~gy-~Cd~~~g~C~~~~ 61 (72)
T 2jye_A 3 DVKCDMEVSCPDGYTCCRLQSGA-----WGCCPFTQAVCCEDHIHCCPAGF-TCDTQKGTCEQKL 61 (72)
T ss_dssp SCCSSTTCCCCTTCCEEECSSSS-----EEECCSSSSTTSSSSSCSSCSSC-CEETTTTEECSSS
T ss_pred ceeCCCCCCCCCCCcccCCCCCC-----CccCCCCCCCccCCCCccCCCCC-eeCCCCCeEeCCC
Confidence 56899999999999999999855 99999999999999999999999 9999999999998
No 45
>2jyv_A Granulin-2, granulin F; granulin C, epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens}
Probab=99.88 E-value=2.4e-24 Score=163.35 Aligned_cols=61 Identities=33% Similarity=0.835 Sum_probs=27.0
Q ss_pred CcCC-CCceeeCCCCccccccCCCCccccccccCCCCceecCCCCcccCCCCCcccCCCCceecCCCCC
Q 013543 346 PTRC-SLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGN 413 (441)
Q Consensus 346 p~~c-~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~~a~cc~d~~~ccp~~~~~c~~~~~~c~~~~~~~ 413 (441)
.++| |++++||+++|||++..+ +||||||++||||+||.||||+|| +||++.++|++.+ ++
T Consensus 3 ~v~CpD~~~~Cp~~~TCC~~~~g-----~wgCCPl~~AvCC~D~~hCCP~gy-~Cd~~~g~C~~~~-~~ 64 (72)
T 2jyv_A 3 AIQCPDSQFECPDFSTCCVMVDG-----SWGCCPMPQASCCEDRVHCCPHGA-FCDLVHTRCIKLA-AA 64 (72)
T ss_dssp CBCCSSCSSCBCTTEEEEECSSS-----CEEEEECCC--------------------------------
T ss_pred eeECCCCCcCCCCCCcccCCCCC-----CEeccCCCCCCcCCCCCccCCCcC-eeCCCCCEEeCCC-CC
Confidence 3589 778999999999999754 599999999999999999999999 9999999999998 54
No 46
>2jyt_A Granulin-5, granulin C; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} PDB: 2jyu_A
Probab=99.87 E-value=1.7e-23 Score=157.08 Aligned_cols=58 Identities=40% Similarity=0.980 Sum_probs=51.6
Q ss_pred CcCCCCceeeCCCCccccccCCCCccccccccCCCCceecCCCCcccCCCCCcccCCCCceecCC
Q 013543 346 PTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRL 410 (441)
Q Consensus 346 p~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~~a~cc~d~~~ccp~~~~~c~~~~~~c~~~~ 410 (441)
+++||++++||+++|||++.++. ||||||++||||+|+.||||+|| +|+ ..|+|+|.+
T Consensus 2 ~v~Cd~~~~CP~~~TCC~~~~G~-----wgCCPl~~AvCC~D~~hCCP~gy-~C~-~~g~C~k~~ 59 (69)
T 2jyt_A 2 MVPCDNVSSCPSSDTCCQLTSGE-----WGCCPIPEAVCCSDHQHCCPQGY-TCV-AEGQCQKLA 59 (69)
T ss_dssp -CCSCSSCCCCSSCEEEECSSSC-----EEEECCCCCCCCSSTTCCCSTTC-EEE-TTTEEEC--
T ss_pred cccCCCccCCCCCCeecCCCCCC-----CccCcCCCCCcCCCCCccCCCCC-eeC-CCCcCcCCC
Confidence 45899999999999999999954 99999999999999999999999 995 569999997
No 47
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.77 E-value=1.1e-18 Score=145.05 Aligned_cols=75 Identities=32% Similarity=0.667 Sum_probs=69.3
Q ss_pred CchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCcEEEecccCCCCChHHhhhhhcCcCCC
Q 013543 21 YCSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAA 96 (441)
Q Consensus 21 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~~s~~lg~N~FsDlt~eEf~~~~lg~~~~ 96 (441)
.+..+..+|++|+++|+|.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++.++|.+..
T Consensus 17 ~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 17 KEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred CcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 3667889999999999999999899999999999999999999998 89999999999999999999999886654
No 48
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.71 E-value=7.5e-18 Score=133.60 Aligned_cols=68 Identities=28% Similarity=0.515 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCcEEEecccCCCCChHHhhhhhcCcCC
Q 013543 26 NELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSA 95 (441)
Q Consensus 26 ~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~~~s~~lg~N~FsDlt~eEf~~~~lg~~~ 95 (441)
..+|++|+.+|+|.|.+.+|+.+| .||++|+++|++||++ ++.+|++|+|+|+|||.+|| +.++|...
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 468999999999999988899999 9999999999999985 46789999999999999999 88877543
No 49
>1fwo_A Oryzain beta chain; beta-hairpin stack fold, granulin/epithelin-like protein repeats, hydrolase; NMR {Synthetic} SCOP: g.3.16.1
Probab=99.46 E-value=2e-14 Score=93.43 Aligned_cols=34 Identities=26% Similarity=0.593 Sum_probs=32.5
Q ss_pred cCCCCceeeCCCCccccccCCCCccccccccCCC
Q 013543 347 TRCSLLTYCAAGETCCCGSSILGICLSWKCCGFS 380 (441)
Q Consensus 347 ~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~ 380 (441)
++||++++||+++||||+.+++++|++||||||+
T Consensus 2 ~~CD~~~sCP~~~TCCc~~~~~~~C~~WGCCPle 35 (35)
T 1fwo_A 2 HVCDDNFSCPAGSTCSSAFGFRNLSLVWGCSPVE 35 (35)
T ss_dssp CCSSSSCCCCSSSEECCCCCSSCSSCCCCEECCC
T ss_pred ccCCCcccCCCCCcEEeeeccCCccceEeCccCC
Confidence 5799999999999999999999999999999985
No 50
>1g26_A Granulin A, HGA; granulin/epithelin protein repeats, beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1
Probab=99.11 E-value=9.2e-12 Score=79.15 Aligned_cols=31 Identities=35% Similarity=0.933 Sum_probs=27.5
Q ss_pred CcCCCCceeeCCCCccccccCCCCccccccccCCCC
Q 013543 346 PTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSS 381 (441)
Q Consensus 346 p~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~~ 381 (441)
+++||++++||+++|||++..+ +||||||++
T Consensus 1 ~v~Cd~~~~Cp~~~TCC~~~~g-----~wgCCP~~~ 31 (31)
T 1g26_A 1 VVHCDMEVICPDGYTCCRLPSG-----AWGCCPFTQ 31 (31)
T ss_dssp CEEEETTEEECTTEEEEECTTS-----CEEEEECCC
T ss_pred CeeCCCCCccCCCCeecCCCCC-----CeEcCCCCC
Confidence 3579999999999999999965 499999985
No 51
>1i8x_A Granulin-1; two beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1 PDB: 1qgm_A 1i8y_A
Probab=99.04 E-value=3.8e-11 Score=75.34 Aligned_cols=29 Identities=34% Similarity=0.799 Sum_probs=25.9
Q ss_pred cCCCCceeeCCCCccccccCCCCccccccccCCC
Q 013543 347 TRCSLLTYCAAGETCCCGSSILGICLSWKCCGFS 380 (441)
Q Consensus 347 ~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~ 380 (441)
++||++++||+++|||++..+. ||||||+
T Consensus 2 v~CD~~~~CP~~~TCC~~~~G~-----WGCCP~~ 30 (30)
T 1i8x_A 2 IHCDAATICPDGTTCSLSPYGV-----WYCSPFS 30 (30)
T ss_dssp CCTTTTCCCCTTEEEEECTTSC-----EEEEECC
T ss_pred ccCCCCccCCCCCeeeccCCCC-----EecCcCC
Confidence 4799999999999999987754 9999986
No 52
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=96.80 E-value=0.012 Score=52.08 Aligned_cols=127 Identities=20% Similarity=0.228 Sum_probs=83.7
Q ss_pred cCCCCchhHHHHHHHHHhHhHH--------HhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhCCcCCCCCCC
Q 013543 134 DQASCGACWAFSATGAIEGINK--------IVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYP 205 (441)
Q Consensus 134 dQg~cGsCwAfa~~~~lE~~~~--------i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yP 205 (441)
.||.-+=|-+|+.++.|-+... |.+.....+|+|+|.++ |..+...++|+... |-..
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t---------~~~~~q~Iky~~s~-G~~~----- 90 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQ-GRDI----- 90 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC---------CBCHHHHHHHHHHT-TCCC-----
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHc-CcCh-----
Confidence 4999999999999999876532 11222367888888773 45688888888643 4211
Q ss_pred CCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccccCCCceEeCCCCCCCCceEEEEEE
Q 013543 206 YRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGY 284 (441)
Q Consensus 206 Y~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~HaV~IVGy 284 (441)
.. ..+. .+.+.+++.+.+ .||.|...-. +........+||++||||
T Consensus 91 ---------------~~-----~nr~--ls~neV~~~i~~Nk~I~v~~~~v-----------~e~~~~~~~gHA~av~Gy 137 (183)
T 1pxv_A 91 ---------------HY-----QEGV--PSYNQVDQLTKDNVGIMILAQSV-----------SQNPNDPHLGHALAVVGN 137 (183)
T ss_dssp ---------------EE-----EESC--CCHHHHHHHHHTTCCEEEEEECC-----------CSSTTSCCCEEEEEEEEE
T ss_pred ---------------hH-----hcCC--CCHHHHHHHHhcCCcEEEEcccc-----------ccCCCCccCceeEEEEee
Confidence 00 0011 235677888876 5988765432 112233467999999999
Q ss_pred eecCCeeEEEEEcCCCCCCCCCcEEEEEe
Q 013543 285 DSENGVDYWIIKNSWGRSWGMNGYMHMQR 313 (441)
Q Consensus 285 g~~~g~~yWivkNSWG~~WGe~GY~~i~r 313 (441)
-.-++.++.+|=|=|-. |++-+.-
T Consensus 138 a~~~~~~~y~~WNPW~~-----~~~~~~a 161 (183)
T 1pxv_A 138 AKINDQEKLIYWNPWDT-----ELSIQDA 161 (183)
T ss_dssp EEETTEEEEEEECTTCS-----SCEEEET
T ss_pred eecCCCeEEEEeCCccC-----CcEeecC
Confidence 98888899999776643 7776654
No 53
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=96.47 E-value=0.038 Score=53.92 Aligned_cols=128 Identities=20% Similarity=0.250 Sum_probs=82.5
Q ss_pred ccCCCCchhHHHHHHHHHhHhHH--------HhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhCCcCCCCCC
Q 013543 133 KDQASCGACWAFSATGAIEGINK--------IVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDY 204 (441)
Q Consensus 133 kdQg~cGsCwAfa~~~~lE~~~~--------i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y 204 (441)
..||.-+-|-+|+.+++|-+... +.+.-...+|+++|.++ |..+...++|+. ..|...
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t---------s~~~~q~Iky~q-syG~~~---- 266 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGK-SQGRDI---- 266 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC---------CCCHHHHHHHHH-HTTEEE----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHH-HhCcch----
Confidence 35999999999999999876432 11222356788888773 456788888886 444311
Q ss_pred CCCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccccCCCceEeCCCCCCCCceEEEEE
Q 013543 205 PYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVG 283 (441)
Q Consensus 205 PY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~HaV~IVG 283 (441)
+-....+ +.+.+++.+.. .||.|........ ......+|||+|||
T Consensus 267 ---------------------~~~n~~l--s~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavvG 312 (367)
T 1x9y_A 267 ---------------------HYQEGVP--SYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVVG 312 (367)
T ss_dssp ---------------------EEEESCC--CHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEEE
T ss_pred ---------------------hhhcCCC--CHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEEe
Confidence 1111122 34566777765 5998877653211 12236799999999
Q ss_pred EeecCCeeEEEEEcCCCCCCCCCcEEEEEe
Q 013543 284 YDSENGVDYWIIKNSWGRSWGMNGYMHMQR 313 (441)
Q Consensus 284 yg~~~g~~yWivkNSWG~~WGe~GY~~i~r 313 (441)
|...++.+|.++=|=| |.+ ++-+.-
T Consensus 313 yA~~~~~~~y~~WNPW---~~~--~~~~sa 337 (367)
T 1x9y_A 313 NAKINDQEKLIYWNPW---DTE--LSIQDA 337 (367)
T ss_dssp EEEETTEEEEEEECTT---CSS--CEEEET
T ss_pred ccccCCCcEEEEecCc---cCC--ceeecC
Confidence 9877788999996655 433 555543
No 54
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.24 E-value=0.067 Score=47.22 Aligned_cols=118 Identities=16% Similarity=0.173 Sum_probs=77.9
Q ss_pred cCCCCchhHHHHHHHHHhHhHH--------HhcCCcccCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhCCcCCCCCCC
Q 013543 134 DQASCGACWAFSATGAIEGINK--------IVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYP 205 (441)
Q Consensus 134 dQg~cGsCwAfa~~~~lE~~~~--------i~~~~~~~LSeq~lvdc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yP 205 (441)
.||.-+=|-+|+.++.|-+... +.+.-...+|+++|.... ..+...++|+.+. |-..
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~---------~t~~e~iky~~s~-g~~~----- 81 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG---------LTPREMIYFGQTQ-GRSP----- 81 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC---------CCHHHHHHHHHHT-TCCC-----
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC---------CCHHHHHHHHHHc-CCCh-----
Confidence 4999999999999999876532 222234679999998543 4677888887654 3110
Q ss_pred CCCCCCCCCCCcCCceeEeecceeecCCChHHHHHHHHHh-CCeEEEEeccccccccCCCceEeCCCCCCCCceEEEEEE
Q 013543 206 YRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGY 284 (441)
Q Consensus 206 Y~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~HaV~IVGy 284 (441)
... .+. -+.+.+++.+.+ -||.|..+.. + . ......+||++||||
T Consensus 82 ----------~~~----------n~~--ls~~eV~~~~~~nk~i~i~~~~v-e----~-------~~~~~~gHAlav~Gy 127 (174)
T 1cv8_A 82 ----------QLL----------NRM--TTYNEVDNLTKNNKGIAILGSRV-E----S-------RNGMHAGHAMAVVGN 127 (174)
T ss_dssp ----------EEE----------SSC--CCHHHHHHHHHTTCCEEEEEEES-S----C-------BTTBCCEEEEEEEEE
T ss_pred ----------hhh----------cCC--CCHHHHHHHHhcCCceEEEcccc-c----C-------CCCCCCceeEEEEee
Confidence 000 011 135677788876 4887766532 1 1 112357899999999
Q ss_pred ee-cCCeeEEEEEcCCC
Q 013543 285 DS-ENGVDYWIIKNSWG 300 (441)
Q Consensus 285 g~-~~g~~yWivkNSWG 300 (441)
-. .+|.+|.++=|=|-
T Consensus 128 ~~~~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 128 AKLNNGQEVIIIWNPWD 144 (174)
T ss_dssp EEETTSCEEEEEECTTC
T ss_pred eeecCCceEEEEeCCcc
Confidence 97 47889999977664
No 55
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=84.87 E-value=2.4 Score=39.49 Aligned_cols=63 Identities=25% Similarity=0.422 Sum_probs=37.5
Q ss_pred ecCCChHHHHHHHHHhC-CeEEEEecccc-----ccccC--CCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCC
Q 013543 230 DVPENNEKQLLQAVVAQ-PVSVGICGSER-----AFQLY--SSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSW 299 (441)
Q Consensus 230 ~v~~~~~~~lk~al~~g-PV~v~i~~~~~-----~f~~Y--~sGIy~~~c~~~~~HaV~IVGyg~~~g~~yWivkNSW 299 (441)
++...+.++|++.|.+| ||.|-+..... .|+.+ .+|-.. -...+|+|+|+||+.. ..+|-+.+
T Consensus 126 dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~---~~~~~H~VVl~GYd~~----~vyi~DP~ 196 (236)
T 3erv_A 126 DLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVS---ITYNEHCVVLIGYDQE----SVYIRDPL 196 (236)
T ss_dssp ECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEE---ECTTEEEEEEEEECSS----EEEEECTT
T ss_pred ecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCcee---eccCCeEEEEEEEeCC----EEEEECCC
Confidence 45555789999999987 99886654211 12111 122111 0235799999999862 34455554
No 56
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=40.06 E-value=46 Score=32.16 Aligned_cols=59 Identities=17% Similarity=0.406 Sum_probs=35.2
Q ss_pred HHHHHHHHh-CCeEEEEeccccccccCCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEe
Q 013543 237 KQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQR 313 (441)
Q Consensus 237 ~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r 313 (441)
+.|++.|.+ .||.+.-.. ..+ . +...+||.+|=||..+ +||=|-=.||-. .+|||.+.-
T Consensus 239 ~~i~~eL~~~rPV~~~G~~--~~~------~-----~~~~GHafV~DGY~~~---~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVS--PGS------M-----GQDAGHAFVIDGYNKA---GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTT---SCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEec--CCC------C-----CCCCceEEEEccccCC---CeEEEecCCCCC--CCceEeccC
Confidence 456777776 498664321 111 1 1357999999999864 577764334421 389999853
No 57
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=38.54 E-value=43 Score=31.43 Aligned_cols=52 Identities=27% Similarity=0.652 Sum_probs=36.1
Q ss_pred HHHHHHHHhC-CeEEEEeccccccccCCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCC--CCcEEEEEe
Q 013543 237 KQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWG--MNGYMHMQR 313 (441)
Q Consensus 237 ~~lk~al~~g-PV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WG--e~GY~~i~r 313 (441)
+.|++.|.+| ||.++-.. +..+||.+|=||+.+ +|+-|- || || .+|||.+.-
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~---~~~H~N--wG--WgG~~nGYy~l~~ 226 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR---NFYHVN--WG--WGGVSDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS---SCEEEE--CS--STTTTCEEECTTC
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC---CEEEEE--cC--CCCCCCceeeccc
Confidence 5677778774 98765321 146899999999854 566663 55 44 489999854
No 58
>1omc_A Omega-conotoxin GVIA; presynaptic neurotoxin; HET: HYP; NMR {Conus geographus} SCOP: g.3.6.1 PDB: 1ttl_A* 2cco_A* 1tr6_A*
Probab=37.43 E-value=16 Score=22.02 Aligned_cols=20 Identities=30% Similarity=0.916 Sum_probs=14.3
Q ss_pred cCCCCcccCCCCCcccCCCCcee
Q 013543 385 CSDHRYCCPSNYPICDSVRHQCL 407 (441)
Q Consensus 385 c~d~~~ccp~~~~~c~~~~~~c~ 407 (441)
|.-+.||| .+ .|+...++|.
T Consensus 8 C~~~~~CC-s~--~C~~~~~~C~ 27 (28)
T 1omc_A 8 CSPTSYNC-CR--SCNPYTKRCY 27 (28)
T ss_dssp CCTTTTCB-SS--CEETTTTEEC
T ss_pred cCCCccHH-HH--HHcchhCEeC
Confidence 35567888 44 5988888884
No 59
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=36.94 E-value=57 Score=32.17 Aligned_cols=52 Identities=29% Similarity=0.664 Sum_probs=34.8
Q ss_pred HHHHHHHHh-CCeEEEEeccccccccCCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCC--CCcEEEEEe
Q 013543 237 KQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWG--MNGYMHMQR 313 (441)
Q Consensus 237 ~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGIy~~~c~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WG--e~GY~~i~r 313 (441)
+.|++.|.+ .||.+.-.. ..++||.+|=||+.+ +||=|= || || .+|||.+.-
T Consensus 290 ~~i~~eL~~~rPV~~~G~~------------------~~gGHAfV~DGy~~~---~~~H~N--wG--WgG~~nGyy~l~~ 344 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR---NFYHVN--WG--WGGVSDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEECSS---SEEEEE--CS--STTTTCEEEESCC
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEECcccCC---CeEEEE--eC--cCCCCCcceeccC
Confidence 456677776 498653211 126899999999853 577663 55 44 589999853
No 60
>2jmv_A Scytovirin; protein, sugar binding protein, antiviral protein; NMR {Scytonema varium} PDB: 2qsk_A 2qt4_A
Probab=36.07 E-value=32 Score=25.99 Aligned_cols=9 Identities=33% Similarity=0.604 Sum_probs=5.2
Q ss_pred ccccccccC
Q 013543 370 ICLSWKCCG 378 (441)
Q Consensus 370 ~~~~~~cc~ 378 (441)
.|.++|.|.
T Consensus 79 TCSs~G~CQ 87 (95)
T 2jmv_A 79 TCSSSGFCQ 87 (95)
T ss_dssp CSSSSSSSS
T ss_pred eeccccccc
Confidence 455566664
No 61
>1ntx_A Alpha-neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1
Probab=32.85 E-value=11 Score=27.20 Aligned_cols=26 Identities=23% Similarity=0.595 Sum_probs=18.5
Q ss_pred ccccccc-cCCCCceecCCCCcccCCCCCccc
Q 013543 370 ICLSWKC-CGFSSAVCCSDHRYCCPSNYPICD 400 (441)
Q Consensus 370 ~~~~~~c-c~~~~a~cc~d~~~ccp~~~~~c~ 400 (441)
.=...|| ||-+.. ....+||..|. ||
T Consensus 33 ~~i~rGCaCP~~~~---~~~v~CCsTD~--CN 59 (60)
T 1ntx_A 33 TIIERGCGCPKVKP---GVGIHCCQSDK--CN 59 (60)
T ss_dssp EEEEEEESCCCCCT---TSEEEEESSTT--CC
T ss_pred CEEeeECcCCCCCC---CcEEEecCCCC--CC
Confidence 4466799 998765 23678888884 76
No 62
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=29.65 E-value=29 Score=35.62 Aligned_cols=51 Identities=25% Similarity=0.601 Sum_probs=34.5
Q ss_pred CCCcCCCCceeeCCC--------CccccccCCCCccccccc--cCCCCceecCCCCcc--cCCCCCcccCCCCceecCC
Q 013543 344 PGPTRCSLLTYCAAG--------ETCCCGSSILGICLSWKC--CGFSSAVCCSDHRYC--CPSNYPICDSVRHQCLTRL 410 (441)
Q Consensus 344 ~~p~~c~~~~~c~~~--------~tcc~~~~~~~~~~~~~c--c~~~~a~cc~d~~~c--cp~~~~~c~~~~~~c~~~~ 410 (441)
.|.++|.. +||.| ..|| |.| ||--+-. .|..+| ||.+. -=|..+..|+...
T Consensus 480 ~P~S~CS~--~C~pG~rk~~~~g~~CC-----------~~C~~C~~~~~~--td~~~C~~Cp~~~-wpn~~~~~C~~k~ 542 (555)
T 2e4u_A 480 VPTSQCSD--PCAPNEMKNMQPGDVCC-----------WICIPCEPYEYL--VDEFTCMDCGPGQ-WPTADLSGCYNLP 542 (555)
T ss_dssp CCCCCSSC--CCCTTTEEEECCSSSSC-----------CEEEECCTTEEE--EETTEEEECCTTE-EECTTSSSEEECC
T ss_pred CcceeeCC--CCCCCeeeeecCCCeeE-----------EECccCCCceec--CCCccceeCCccc-CcCCCcCcccCCC
Confidence 34568874 48754 3777 444 3322222 688899 99996 7788899998876
No 63
>1ug4_A Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {Naja atra} PDB: 1h0j_A* 1i02_A 1xt3_A* 2bhi_A* 2crs_A 2crt_A 1cxn_A 1cxo_A 1tgx_A 1cb9_A 1ccq_A 1ffj_A 1chv_S 2ccx_A 1cre_A 1crf_A 1kbs_A 1kbt_A 1rl5_A 1zad_A ...
Probab=26.32 E-value=25 Score=25.08 Aligned_cols=47 Identities=26% Similarity=0.495 Sum_probs=28.7
Q ss_pred CCCceeeCCCCc-ccccc-CC-CCccccccc---cCCCCceecCCCCcccCCCCCccc
Q 013543 349 CSLLTYCAAGET-CCCGS-SI-LGICLSWKC---CGFSSAVCCSDHRYCCPSNYPICD 400 (441)
Q Consensus 349 c~~~~~c~~~~t-cc~~~-~~-~~~~~~~~c---c~~~~a~cc~d~~~ccp~~~~~c~ 400 (441)
|.....||+|++ |=... .. .|.=...|| ||-++. ....+||..|. ||
T Consensus 8 ~~~~~tC~~g~~~Cyk~~~~~~~g~~i~rGCa~tCP~~~~---~~~v~CC~TD~--CN 60 (60)
T 1ug4_A 8 PPFYKTCAAGKNLCYKMFMVAAPKVPVKRGCIDVCPKSSL---LVKYVCCNTDR--CN 60 (60)
T ss_dssp TTSEEECCTTCCEEEEEEETTEEEEEEEEEEESSCCCCCS---SEEEEEECSTT--CC
T ss_pred CCCCEEcCCCcCeEeeeEEecCCCCEEECCccCcCcCCCC---CceeEecCCCC--CC
Confidence 445667998887 44321 11 134466799 997665 23568888774 64
No 64
>1mr6_A Neurotoxin; venom; NMR {Bungarus multicinctus} SCOP: g.7.1.1
Probab=25.34 E-value=62 Score=23.38 Aligned_cols=47 Identities=26% Similarity=0.655 Sum_probs=28.7
Q ss_pred CCCceeeCCCCccccccCC---CC----ccccccc---cCCCCceecCCCCcccCCCCCccc
Q 013543 349 CSLLTYCAAGETCCCGSSI---LG----ICLSWKC---CGFSSAVCCSDHRYCCPSNYPICD 400 (441)
Q Consensus 349 c~~~~~c~~~~tcc~~~~~---~~----~~~~~~c---c~~~~a~cc~d~~~ccp~~~~~c~ 400 (441)
|.....||+|++=|-.... .+ .=...|| ||-.+. ....+||-.|. ||
T Consensus 11 ~~~~~tCp~g~~~C~~~~~~~~~g~~~~~~i~rGCa~tCp~~~~---~~~v~CC~TD~--CN 67 (68)
T 1mr6_A 11 CPNSETCPDGKNICVKRSWTAVRGDGPKREIRRECAATCPPSKL---GLTVFCCTTDN--CN 67 (68)
T ss_dssp CCSCCBCCTTCCCEEEECCBCCSSSCCSBCCEEEECSSSSSCCS---SSCCCCBSSSS--CC
T ss_pred CccccEeCCCCCEEEEEEEecccCccccceEeCCccCcCcCCCC---CceeEecCCCC--CC
Confidence 4445579888876622111 11 3346789 886554 34778999884 76
No 65
>1p1p_A AA-conotoxin PIVA; neurotoxin, acetylcholine receptor binding, transcription regulation; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.3
Probab=24.69 E-value=45 Score=19.24 Aligned_cols=10 Identities=50% Similarity=1.627 Sum_probs=7.4
Q ss_pred cccC-CCCcee
Q 013543 375 KCCG-FSSAVC 384 (441)
Q Consensus 375 ~cc~-~~~a~c 384 (441)
|||. ||+|.|
T Consensus 1 gccg~ypnaac 11 (26)
T 1p1p_A 1 GCCGSYPNAAC 11 (26)
T ss_dssp CCSTTSCCSSC
T ss_pred CccccCCCccc
Confidence 4665 799987
No 66
>2h7z_B Irditoxin subunit B; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1
Probab=24.56 E-value=50 Score=24.74 Aligned_cols=49 Identities=16% Similarity=0.378 Sum_probs=30.7
Q ss_pred CCCCceeeCCCCccccccCC----CCcc-ccccc---cCCCCceecCCCCcccCCCCCcccC
Q 013543 348 RCSLLTYCAAGETCCCGSSI----LGIC-LSWKC---CGFSSAVCCSDHRYCCPSNYPICDS 401 (441)
Q Consensus 348 ~c~~~~~c~~~~tcc~~~~~----~~~~-~~~~c---c~~~~a~cc~d~~~ccp~~~~~c~~ 401 (441)
.|.....||+|++=|-.... .|.= ...|| ||-.+. ....+||-.|. ||.
T Consensus 20 ~c~~~~tCp~g~~~Cyk~~~~~~~~g~~~i~rGCa~tCp~~~~---~~~v~CC~TD~--CN~ 76 (77)
T 2h7z_B 20 NCFKDNRCPPYHRTCYTLYRPDGNGEMKWAVKGCAKTCPTAQP---GESVQCCNTPK--CND 76 (77)
T ss_dssp SCSSCEECCTTCCEEEEEEEECSSSCEEEEEEEEESSCCCCCT---TCEEEEECSTT--TTC
T ss_pred CCccCcCcCCCcCEEeEEEEecCCCCceeEeCCcCCcCcCCCC---CceeEecCCCC--CCC
Confidence 35556789999886622211 2222 45799 987654 23678999884 874
No 67
>1cvo_A Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.7.1.1 PDB: 1kxi_A
Probab=24.18 E-value=35 Score=24.42 Aligned_cols=47 Identities=23% Similarity=0.569 Sum_probs=28.5
Q ss_pred CCCceeeCCCCc-ccccc-C-C-CCccccccc---cCCCCceecCCCCcccCCCCCccc
Q 013543 349 CSLLTYCAAGET-CCCGS-S-I-LGICLSWKC---CGFSSAVCCSDHRYCCPSNYPICD 400 (441)
Q Consensus 349 c~~~~~c~~~~t-cc~~~-~-~-~~~~~~~~c---c~~~~a~cc~d~~~ccp~~~~~c~ 400 (441)
|.....||+|++ |=... . . .|.=...|| ||-.+. ....+||..|. ||
T Consensus 9 ~~~~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCp~~~~---~~~i~CC~TD~--CN 62 (62)
T 1cvo_A 9 PFIYKTCPEGKNLCFKATLKKFPLKFPVKRGCADNCPKNSA---LLKYVCCSTDK--CN 62 (62)
T ss_dssp SSCCEECCTTCCEEEEEEETTSSSCCCEEEEEESSCCCCCT---TEEEEEESSTT--CC
T ss_pred CCcCeEcCCCcCEEeeeEEeCCCCCcEEeCCccCcCcCCCC---CcEeEecCCCC--CC
Confidence 444567998887 43321 1 1 234467899 997665 13567888774 64
No 68
>1vyc_A Bucain, neurotoxin; snake neurotoxin; NMR {Bungarus candidus} SCOP: g.7.1.1 PDB: 2h8u_A
Probab=22.92 E-value=68 Score=23.10 Aligned_cols=47 Identities=19% Similarity=0.441 Sum_probs=31.1
Q ss_pred CCCceeeCCCCc-cccc--cCC-CCccccccc---cCCCCceecCCCCcccCCCCCccc
Q 013543 349 CSLLTYCAAGET-CCCG--SSI-LGICLSWKC---CGFSSAVCCSDHRYCCPSNYPICD 400 (441)
Q Consensus 349 c~~~~~c~~~~t-cc~~--~~~-~~~~~~~~c---c~~~~a~cc~d~~~ccp~~~~~c~ 400 (441)
|.....||+|++ |=.. +.. .|.=...|| ||-++. ....+||..|. ||
T Consensus 11 ~~~~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCP~~~~---~~~i~CC~TD~--CN 64 (65)
T 1vyc_A 11 NESSKTCPSGQLLCLKKWEIGNPSGKEVKRGCVATCPKPWK---NEIIQCCAKDK--CN 64 (65)
T ss_dssp CCEEEECCTTCCEEEEEECCSSSSCCCEEEEEESSCCCCCS---CCCEEEESSSS--CC
T ss_pred CccceEcCCCcCEEEeeEEEecCCCCEEECCccCcCcCCCC---CceeEecCCCC--CC
Confidence 445668998887 5443 222 244567899 997665 24778999884 76
Done!