Query 013544
Match_columns 441
No_of_seqs 136 out of 791
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 12:34:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z0n_A 5'-AMP-activated protei 99.9 3.3E-22 1.1E-26 165.6 9.2 81 347-441 8-89 (96)
2 2qlv_B Protein SIP2, protein S 99.9 5.1E-22 1.7E-26 190.1 10.5 84 348-441 2-86 (252)
3 3nme_A Ptpkis1 protein, SEX4 g 99.9 3.4E-22 1.2E-26 192.5 8.7 83 348-441 168-253 (294)
4 4aee_A Alpha amylase, catalyti 99.5 4.2E-14 1.4E-18 149.1 8.0 79 347-438 15-102 (696)
5 4aef_A Neopullulanase (alpha-a 99.2 3.8E-11 1.3E-15 125.1 8.1 68 349-429 16-84 (645)
6 2z0b_A GDE5, KIAA1434, putativ 98.2 2.7E-06 9.1E-11 73.9 7.4 69 347-423 6-99 (131)
7 3c8d_A Enterochelin esterase; 98.2 3.6E-06 1.2E-10 82.9 8.5 81 347-440 28-149 (403)
8 1ac0_A Glucoamylase; hydrolase 97.9 8.5E-06 2.9E-10 67.7 3.8 75 348-430 5-93 (108)
9 1m7x_A 1,4-alpha-glucan branch 97.5 0.0003 1E-08 73.6 9.3 68 350-429 25-100 (617)
10 3k1d_A 1,4-alpha-glucan-branch 97.3 0.00038 1.3E-08 75.2 7.6 69 349-429 135-211 (722)
11 3aml_A OS06G0726400 protein; s 97.1 0.00052 1.8E-08 74.2 6.9 63 351-426 66-142 (755)
12 2laa_A Beta/alpha-amylase; SBD 95.9 0.016 5.4E-07 49.3 6.6 66 350-427 5-77 (104)
13 1bf2_A Isoamylase; hydrolase, 95.9 0.0083 2.8E-07 64.5 6.1 56 351-419 17-85 (750)
14 1qho_A Alpha-amylase; glycosid 95.9 0.02 6.9E-07 60.4 8.8 70 349-430 581-673 (686)
15 1cyg_A Cyclodextrin glucanotra 95.7 0.032 1.1E-06 58.9 9.6 74 348-430 578-667 (680)
16 3vgf_A Malto-oligosyltrehalose 95.7 0.0057 2E-07 63.2 3.7 61 351-427 10-73 (558)
17 2vn4_A Glucoamylase; hydrolase 95.6 0.024 8.1E-07 60.1 8.1 73 350-430 497-583 (599)
18 2wsk_A Glycogen debranching en 95.5 0.014 4.8E-07 61.7 5.9 54 351-418 20-77 (657)
19 2vr5_A Glycogen operon protein 95.3 0.018 6.2E-07 61.6 6.0 55 351-419 30-91 (718)
20 2bhu_A Maltooligosyltrehalose 95.2 0.019 6.4E-07 60.2 5.6 61 351-428 35-96 (602)
21 3bmv_A Cyclomaltodextrin gluca 95.2 0.038 1.3E-06 58.3 7.9 73 349-430 583-670 (683)
22 1d3c_A Cyclodextrin glycosyltr 94.9 0.054 1.8E-06 57.2 7.9 74 348-430 585-673 (686)
23 1vem_A Beta-amylase; beta-alph 94.6 0.063 2.1E-06 56.0 7.7 71 349-430 419-506 (516)
24 1wzl_A Alpha-amylase II; pullu 93.8 0.072 2.5E-06 55.1 6.0 59 350-416 23-87 (585)
25 2e8y_A AMYX protein, pullulana 93.7 0.071 2.4E-06 56.8 5.9 66 351-429 114-186 (718)
26 2fhf_A Pullulanase; multiple d 93.1 0.077 2.6E-06 59.9 5.4 68 350-429 304-385 (1083)
27 1j0h_A Neopullulanase; beta-al 92.4 0.1 3.5E-06 54.0 4.6 60 349-416 22-89 (588)
28 3faw_A Reticulocyte binding pr 91.8 0.092 3.1E-06 58.1 3.6 65 352-428 146-224 (877)
29 3m07_A Putative alpha amylase; 91.4 0.28 9.5E-06 51.8 6.7 62 351-429 43-107 (618)
30 2wan_A Pullulanase; hydrolase, 91.2 0.24 8.1E-06 54.8 6.2 63 351-427 326-398 (921)
31 4aio_A Limit dextrinase; hydro 91.2 0.16 5.4E-06 53.8 4.6 92 311-417 93-194 (884)
32 2ya0_A Putative alkaline amylo 91.1 0.22 7.4E-06 53.1 5.6 64 351-426 25-104 (714)
33 1gcy_A Glucan 1,4-alpha-maltot 90.9 0.043 1.5E-06 56.1 0.0 70 349-429 430-517 (527)
34 2wan_A Pullulanase; hydrolase, 87.8 0.53 1.8E-05 52.0 5.7 51 358-420 161-221 (921)
35 2ya1_A Putative alkaline amylo 86.1 0.64 2.2E-05 52.0 5.2 63 352-426 333-411 (1014)
36 1ji1_A Alpha-amylase I; beta/a 86.1 0.34 1.2E-05 50.6 2.9 60 350-417 30-96 (637)
37 1ea9_C Cyclomaltodextrinase; h 85.6 0.19 6.5E-06 52.1 0.6 59 350-416 23-86 (583)
38 4fch_A Outer membrane protein 78.7 1.3 4.4E-05 40.6 3.3 50 360-420 12-63 (221)
39 2c3v_A Alpha-amylase G-6; carb 78.6 3.9 0.00013 34.6 5.9 65 350-426 10-81 (102)
40 4fe9_A Outer membrane protein 53.6 11 0.00037 37.8 4.3 46 360-416 150-197 (470)
41 4ham_A LMO2241 protein; struct 52.3 12 0.0004 31.4 3.7 30 62-91 17-47 (134)
42 2eef_A Protein phosphatase 1, 52.1 34 0.0012 30.8 6.8 71 351-426 49-132 (156)
43 3tqn_A Transcriptional regulat 51.1 13 0.00044 30.4 3.7 33 62-94 12-45 (113)
44 4fe9_A Outer membrane protein 47.8 14 0.00047 37.0 4.0 53 360-423 260-319 (470)
45 2djm_A Glucoamylase A; beta sa 45.0 33 0.0011 29.0 5.3 67 351-423 22-98 (106)
46 3neu_A LIN1836 protein; struct 43.2 22 0.00076 29.6 4.0 34 61-94 15-49 (125)
47 4dny_A Metalloprotease STCE; m 41.3 23 0.00077 31.3 3.8 25 400-425 98-123 (126)
48 3mxz_A Tubulin-specific chaper 37.2 36 0.0012 29.3 4.4 65 282-346 31-104 (116)
49 3ic7_A Putative transcriptiona 31.0 19 0.00064 30.1 1.6 30 62-91 14-44 (126)
50 4fem_A Outer membrane protein 29.0 32 0.0011 33.2 3.1 51 360-421 149-201 (358)
51 2ek5_A Predicted transcription 28.7 49 0.0017 27.8 3.9 31 62-92 7-38 (129)
52 3tnu_B Keratin, type II cytosk 28.4 86 0.003 26.6 5.4 64 282-345 34-97 (129)
53 3tnu_A Keratin, type I cytoske 26.4 74 0.0025 27.2 4.6 63 283-345 37-99 (131)
54 3qh9_A Liprin-beta-2; coiled-c 24.3 1.2E+02 0.0041 25.0 5.1 50 284-344 26-75 (81)
55 3edp_A LIN2111 protein; APC883 23.1 63 0.0021 29.5 3.7 32 61-92 11-43 (236)
56 1qsd_A Protein (beta-tubulin b 23.0 40 0.0014 28.5 2.2 65 281-345 26-95 (106)
57 1h7c_A Tubulin-specific chaper 22.4 70 0.0024 27.0 3.6 66 281-346 29-101 (108)
58 3by6_A Predicted transcription 22.3 70 0.0024 26.6 3.6 32 61-92 13-45 (126)
59 1mhx_A Immunoglobulin-binding 22.2 24 0.00081 27.7 0.6 14 415-428 48-61 (65)
60 2wv0_A YVOA, HTH-type transcri 22.2 68 0.0023 29.4 3.8 34 61-94 12-46 (243)
61 1v4r_A Transcriptional repress 21.0 70 0.0024 25.1 3.2 32 61-92 13-45 (102)
62 4fch_A Outer membrane protein 20.9 54 0.0019 29.7 2.8 49 361-419 117-169 (221)
63 3bwg_A Uncharacterized HTH-typ 20.6 69 0.0024 29.2 3.5 33 62-94 8-41 (239)
64 3bwu_D FIMD, outer membrane us 20.5 66 0.0022 26.7 3.0 19 403-421 27-45 (125)
No 1
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.87 E-value=3.3e-22 Score=165.56 Aligned_cols=81 Identities=35% Similarity=0.593 Sum_probs=73.5
Q ss_pred CCceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeeecCCCCC
Q 013544 347 SGLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRE 426 (441)
Q Consensus 347 sgL~~VTFtW~~~AksVeVaGSFNnW~~~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~~DPd~P 426 (441)
...++|+|+|..+|+.|+|+|+||+|+ .++|.+. .|.|++++.|++|.|+|||+|||.|++||..|
T Consensus 8 ~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~-------------~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~ 73 (96)
T 1z0n_A 8 AQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS-------------QNNFVAILDLPEGEHQYKFFVDGQWTHDPSEP 73 (96)
T ss_dssp --CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE-------------TTEEEEEEEECSEEEEEEEEETTEEECCTTSC
T ss_pred CCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC-------------CCEEEEEEEccCCCEEEEEEECCeEEcCCCCC
Confidence 456899999998899999999999999 7899863 48999999999999999999999999999999
Q ss_pred cccC-CCccceEEEeC
Q 013544 427 SVTK-GGICNNILRVI 441 (441)
Q Consensus 427 tVtD-~Gn~NNVL~V~ 441 (441)
++.+ .|+.||+|.|.
T Consensus 74 ~~~d~~G~~Nnvi~V~ 89 (96)
T 1z0n_A 74 IVTSQLGTVNNIIQVK 89 (96)
T ss_dssp EEECTTSCEEEEEEEC
T ss_pred eEECCCCCEeEEEEEc
Confidence 9887 79999999984
No 2
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.86 E-value=5.1e-22 Score=190.15 Aligned_cols=84 Identities=31% Similarity=0.438 Sum_probs=77.2
Q ss_pred CceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeeecCCCCCc
Q 013544 348 GLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 427 (441)
Q Consensus 348 gL~~VTFtW~~~AksVeVaGSFNnW~~~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~~DPd~Pt 427 (441)
.+++|+|+|.++|++|+|+|+|++|++.++|.+.. .++|.|++++.|+||+|+|||+|||+|++||++|+
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~----------~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~ 71 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDS----------DNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPT 71 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECS----------SSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceecc----------CCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCE
Confidence 56899999999999999999999999889998741 25789999999999999999999999999999999
Q ss_pred ccC-CCccceEEEeC
Q 013544 428 VTK-GGICNNILRVI 441 (441)
Q Consensus 428 VtD-~Gn~NNVL~V~ 441 (441)
+.+ .|+.||+|.|.
T Consensus 72 ~~d~~G~~nNvi~V~ 86 (252)
T 2qlv_B 72 ATDQMGNFVNYIEVR 86 (252)
T ss_dssp EBCSSCCCEEEEEEC
T ss_pred EecCCCcCcceeecc
Confidence 887 79999999984
No 3
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.86 E-value=3.4e-22 Score=192.50 Aligned_cols=83 Identities=25% Similarity=0.460 Sum_probs=75.6
Q ss_pred CceEEEEEEec-CCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeeecCCCCC
Q 013544 348 GLEVVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRE 426 (441)
Q Consensus 348 gL~~VTFtW~~-~AksVeVaGSFNnW~~~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~~DPd~P 426 (441)
..++|+|+|++ +|++|+|+|+||||+.+++|.++ ..+|.|++++.||||+|+|||+|||+|++||++|
T Consensus 168 ~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~-----------~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~ 236 (294)
T 3nme_A 168 KRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLG-----------KGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEP 236 (294)
T ss_dssp CCEEEEEEEECSSCSCEEEEETTTEEEEEEECEEC-----------TTTCEEEEEEEECSEEEEEEEEETTEEECCTTSC
T ss_pred ccccceeeeccCCCCEEEEEEeccCCCCcccceEc-----------CCCCEEEEEEECCCceEEEEEEECCEEeeCCCCC
Confidence 34899999999 58999999999999988999986 2479999999999999999999999999999999
Q ss_pred cc-cC-CCccceEEEeC
Q 013544 427 SV-TK-GGICNNILRVI 441 (441)
Q Consensus 427 tV-tD-~Gn~NNVL~V~ 441 (441)
.+ .| .|+.||||.|.
T Consensus 237 ~~~~d~~G~~nn~~~v~ 253 (294)
T 3nme_A 237 FIGPNKDGHTNNYAKVV 253 (294)
T ss_dssp EECSCTTSCCEEEEEEC
T ss_pred eeeECCCCCEeEEEEEC
Confidence 87 45 79999999984
No 4
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.47 E-value=4.2e-14 Score=149.08 Aligned_cols=79 Identities=19% Similarity=0.221 Sum_probs=67.4
Q ss_pred CCceEEEEEEec--CCceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeee--c
Q 013544 347 SGLEVVEIQYSG--DGEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK--V 421 (441)
Q Consensus 347 sgL~~VTFtW~~--~AksVeVaGSFNnW~~-~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~--~ 421 (441)
.+..+|+|+++. +|+.|+|+|+||+|++ ..+|.+ .+|.|++++.||||+|+|||+|||+|. +
T Consensus 15 ~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~-------------~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~ 81 (696)
T 4aee_A 15 KGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRK-------------IEEQGIVYLKLWPGEYGYGFQIDNDFENVL 81 (696)
T ss_dssp EEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEE-------------ETTEEEEEEEECSEEEEEEEEETTCCSCCC
T ss_pred CCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEe-------------cCCeEEEEEEcCCceEEEEEEECCEEeecC
Confidence 356789999887 5899999999999975 367875 389999999999999999999999999 8
Q ss_pred CCCCCccc---C-CCccceEE
Q 013544 422 DPQRESVT---K-GGICNNIL 438 (441)
Q Consensus 422 DPd~PtVt---D-~Gn~NNVL 438 (441)
||++|... + .|..|+|.
T Consensus 82 d~~~~~~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 82 DPDNEEKKCVHTSFFPEYKKC 102 (696)
T ss_dssp CTTCCCEEEEECSSCTTSEEE
T ss_pred CCCCCcccccccCCcccccee
Confidence 89888644 3 58899885
No 5
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.16 E-value=3.8e-11 Score=125.10 Aligned_cols=68 Identities=22% Similarity=0.510 Sum_probs=60.2
Q ss_pred ceEEEEEEecCCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeeecCCCCCc
Q 013544 349 LEVVEIQYSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 427 (441)
Q Consensus 349 L~~VTFtW~~~AksVeVaGSFNnW~~~-IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~~DPd~Pt 427 (441)
...|.|.++..|+.|+|.|+||+|.+. .+|++ .++.|.+++.||||.|+|||+|||+|..||.+|.
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~-------------~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~ 82 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ-------------EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPE 82 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE-------------CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCC
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceE-------------cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCC
Confidence 457889999989999999999999864 56764 4689999999999999999999999999999986
Q ss_pred cc
Q 013544 428 VT 429 (441)
Q Consensus 428 Vt 429 (441)
..
T Consensus 83 ~~ 84 (645)
T 4aef_A 83 RR 84 (645)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 6
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.21 E-value=2.7e-06 Score=73.92 Aligned_cols=69 Identities=25% Similarity=0.589 Sum_probs=53.5
Q ss_pred CCceEEEEEEecC---CceEEEEee---eCCCccc--cccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEE--
Q 013544 347 SGLEVVEIQYSGD---GEIVEVAGS---FNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-- 415 (441)
Q Consensus 347 sgL~~VTFtW~~~---AksVeVaGS---FNnW~~~--IpM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIV-- 415 (441)
.....|+|+.... +..|+|+|+ +.+|++. ++|.... .+...+.|.+++.||.| .+||||+|
T Consensus 6 ~~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~--------~~~~~~~W~~~v~lp~~~~~eYKyvi~~ 77 (131)
T 2z0b_A 6 SGPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPEN--------DTGESMLWKATIVLSRGVSVQYRYFKGY 77 (131)
T ss_dssp CCCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECC--------TTCCSSEEEEEEEECTTCCEEEEEEEEE
T ss_pred CCeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccc--------cCCCCCeEEEEEEcCCCCcEEEEEEEEe
Confidence 3457899998863 799999999 8999974 6787531 11257899999999998 59999999
Q ss_pred ------C-C-------eeecCC
Q 013544 416 ------D-G-------QWKVDP 423 (441)
Q Consensus 416 ------D-G-------eW~~DP 423 (441)
+ | .|...+
T Consensus 78 ~~~~~~~~g~~~v~~~~WE~g~ 99 (131)
T 2z0b_A 78 FLEPKTIGGPCQVIVHKWETHL 99 (131)
T ss_dssp EECCCC----CEEEEEEECCSS
T ss_pred ecCccccCCccccceeeECCCC
Confidence 5 3 688877
No 7
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.17 E-value=3.6e-06 Score=82.93 Aligned_cols=81 Identities=21% Similarity=0.206 Sum_probs=64.3
Q ss_pred CCceEEEEEEecC-C-------ceEEEEeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEcCCeeE-EE
Q 013544 347 SGLEVVEIQYSGD-G-------EIVEVAGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTY-EI 411 (441)
Q Consensus 347 sgL~~VTFtW~~~-A-------ksVeVaGSFNnW~~------~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrY-EY 411 (441)
.+.+.|||.|.++ | ++|+|. +++|.. ...|.+. ..+|+|..++.|++|.| .|
T Consensus 28 ~~~~~vtF~~~~p~a~~~~~~~~~V~~~--~~~~~d~~~~~~~~~m~r~-----------~~~~~W~~t~~l~~~~~~~Y 94 (403)
T 3c8d_A 28 DEMFEVTFWWRDPQGSEEYSTIKRVWVY--ITGVTDHHQNSQPQSMQRI-----------AGTDVWQWTTQLNANWRGSY 94 (403)
T ss_dssp SSEEEEEEEEECTTCSTTTCCCCEEEEE--ETTTC-------CCBCEEC-----------TTSSEEEEEEEEETTCEEEE
T ss_pred CCcEEEEEEeeCCCcccccCccceEEEE--CcCCCccccccCccccccC-----------CCCCeEEEEEEECCCcEEEE
Confidence 3467999999997 5 789998 344432 2468774 26899999999999999 99
Q ss_pred EEEEC------------------------CeeecCCCCCcccC-C-CccceEEEe
Q 013544 412 KFIVD------------------------GQWKVDPQRESVTK-G-GICNNILRV 440 (441)
Q Consensus 412 KFIVD------------------------GeW~~DPd~PtVtD-~-Gn~NNVL~V 440 (441)
.|+|| |..+.||.+|.... . |...|+|+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~ 149 (403)
T 3c8d_A 95 CFIPTERDDIFSAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM 149 (403)
T ss_dssp EEEEESCCSTTCCC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC
T ss_pred EEEecCcccccccccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC
Confidence 99999 78899999998764 4 777888876
No 8
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.86 E-value=8.5e-06 Score=67.70 Aligned_cols=75 Identities=27% Similarity=0.538 Sum_probs=56.0
Q ss_pred CceEEEEEEecC---CceEEEEeee---CCCccc--cccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEE-C-
Q 013544 348 GLEVVEIQYSGD---GEIVEVAGSF---NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 416 (441)
Q Consensus 348 gL~~VTFtW~~~---AksVeVaGSF---NnW~~~--IpM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIV-D- 416 (441)
+...|+|..... |+.|+|+|+. .+|++. ++|.... .+.+.+.|++++.||+| .+||||+| |
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~--------~~~~~~~W~~~v~lp~~~~~eYKy~v~~~ 76 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADK--------YTSSDPLWYVTVTLPAGESFEYKFIRIES 76 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSS--------SSSSCSSCEEEECCCSSSCEECCCEECCS
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccc--------cCCcCCeEEEEEEeCCCCeEEEEEEEEcC
Confidence 446788888763 7999999986 599864 6887531 11246899999999999 59999999 3
Q ss_pred -C--eeecCCCCCcccC
Q 013544 417 -G--QWKVDPQRESVTK 430 (441)
Q Consensus 417 -G--eW~~DPd~PtVtD 430 (441)
| .|..+|+.-....
T Consensus 77 ~g~~~WE~g~nR~~~~p 93 (108)
T 1ac0_A 77 DDSVEWESDPNREYTVP 93 (108)
T ss_dssp SSCCCCCCSSCCEECCC
T ss_pred CCCEEeccCCCEEEECC
Confidence 4 4888887765544
No 9
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.46 E-value=0.0003 Score=73.57 Aligned_cols=68 Identities=24% Similarity=0.357 Sum_probs=53.1
Q ss_pred eEEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-cCCeeEEEEEEE---CCee--ec
Q 013544 350 EVVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--KV 421 (441)
Q Consensus 350 ~~VTFtW~~~-AksVeVaGSFNnW~~-~IpM~kd~ss~~~~~~~tkesG~FsttL~-LpPGrYEYKFIV---DGeW--~~ 421 (441)
..|+|+..++ |+.|.|.|+|++|.. .++|.+. ...|+|++++. +.+|.+ |+|.| ||.+ ..
T Consensus 25 ~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-----------~~~GvW~~~v~~~~~g~~-Y~f~i~~~~g~~~~~~ 92 (617)
T 1m7x_A 25 TGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-----------KESGIWELFIPGAHNGQL-YKYEMIDANGNLRLKS 92 (617)
T ss_dssp EEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-----------TTTTEEEEEEETCCTTCE-EEEEEECTTSCEEEEC
T ss_pred CcEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-----------CCCCEEEEEEcCCCCCCE-EEEEEEcCCCcEEEec
Confidence 5789987766 999999999999974 4789863 25799999997 788875 99999 6775 56
Q ss_pred CCCCCccc
Q 013544 422 DPQRESVT 429 (441)
Q Consensus 422 DPd~PtVt 429 (441)
||-...+.
T Consensus 93 DPya~~~~ 100 (617)
T 1m7x_A 93 DPYAFEAQ 100 (617)
T ss_dssp CTTCSSEE
T ss_pred Cccceeec
Confidence 77655443
No 10
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.28 E-value=0.00038 Score=75.23 Aligned_cols=69 Identities=26% Similarity=0.342 Sum_probs=53.6
Q ss_pred ceEEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-cCCeeEEEEEEE---CCee--e
Q 013544 349 LEVVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--K 420 (441)
Q Consensus 349 L~~VTFtW~~~-AksVeVaGSFNnW~~-~IpM~kd~ss~~~~~~~tkesG~FsttL~-LpPGrYEYKFIV---DGeW--~ 420 (441)
...|+|...++ |+.|.|.|+||+|+. .++|.+. ...|+|.+.+. +.+|. .|||.| ||+| +
T Consensus 135 ~~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-----------~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~ 202 (722)
T 3k1d_A 135 VSGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-----------GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDR 202 (722)
T ss_dssp EEEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-----------GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEE
T ss_pred CceEEEEEECCCCCEEEEEeecCCCCCCcccCEEc-----------CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEe
Confidence 45689998777 999999999999985 4788764 24699999997 88885 588888 5764 6
Q ss_pred cCCCCCccc
Q 013544 421 VDPQRESVT 429 (441)
Q Consensus 421 ~DPd~PtVt 429 (441)
.||-...+.
T Consensus 203 ~DPya~~~~ 211 (722)
T 3k1d_A 203 ADPFAFGTE 211 (722)
T ss_dssp CCTTCSSBC
T ss_pred ecccceeec
Confidence 788766544
No 11
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.14 E-value=0.00052 Score=74.24 Aligned_cols=63 Identities=21% Similarity=0.394 Sum_probs=49.2
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-------cCCeeEEEEEEEC---Ce
Q 013544 351 VVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-------LYPGTYEIKFIVD---GQ 418 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaGSFNnW~~-~IpM~kd~ss~~~~~~~tkesG~FsttL~-------LpPGrYEYKFIVD---Ge 418 (441)
.|+|...++ |+.|.|.|+||+|.. .++|.+. ..|+|.+.+. +++|.+ |||.|+ |.
T Consensus 66 gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~------------~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~ 132 (755)
T 3aml_A 66 ATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD------------KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGA 132 (755)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC------------TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCC
T ss_pred eEEEEEECCCCCEEEEEEecCCCCCceeeceeC------------CCCEEEEEEcccccccCCCCCCE-EEEEEECCCCc
Confidence 688987766 999999999999975 4788763 5799999998 788875 888886 45
Q ss_pred ee--cCCCCC
Q 013544 419 WK--VDPQRE 426 (441)
Q Consensus 419 W~--~DPd~P 426 (441)
|. .||-..
T Consensus 133 ~~~~~dpya~ 142 (755)
T 3aml_A 133 WVDRIPAWIR 142 (755)
T ss_dssp CEEECCTTCS
T ss_pred EEecCCcchh
Confidence 53 466443
No 12
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=95.90 E-value=0.016 Score=49.35 Aligned_cols=66 Identities=18% Similarity=0.227 Sum_probs=51.2
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEECCe--eecC
Q 013544 350 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDGQ--WKVD 422 (441)
Q Consensus 350 ~~VTFtW~~~AksVeVaGSFN--nW~~~--IpM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIVDGe--W~~D 422 (441)
..|+|.|..+.+.|+|-..+. +|... ++|.+. .-++.+..++.|+.| .++|+|. ||. |-.+
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~-----------~~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn 72 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA-----------EISGYAKITVDIGSASQLEAAFN-DGNNNWDSN 72 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE-----------TTTTEEEEEEECTTCSCEEEEEE-CSSSCEEST
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc-----------cCCCeEEEEEECCCCCEEEEEEe-CCCCcCcCC
Confidence 578999998899999999984 89864 678653 113433699999976 8999995 874 9988
Q ss_pred CCCCc
Q 013544 423 PQRES 427 (441)
Q Consensus 423 Pd~Pt 427 (441)
+....
T Consensus 73 ~g~Ny 77 (104)
T 2laa_A 73 NTKNY 77 (104)
T ss_dssp TTSCE
T ss_pred CCccE
Confidence 77654
No 13
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.89 E-value=0.0083 Score=64.53 Aligned_cols=56 Identities=9% Similarity=0.094 Sum_probs=44.7
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-----ccccCCCCCCCccccccccCCCcEEEEEE-cC------CeeEEEEEEECC
Q 013544 351 VVEIQYSGD-GEIVEVAGSFNGWHH-----RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LY------PGTYEIKFIVDG 417 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaGSFNnW~~-----~IpM~kd~ss~~~~~~~tkesG~FsttL~-Lp------PGrYEYKFIVDG 417 (441)
.|+|...++ |+.|+|.+ |++|.. .++|.+. ..|+|.+.+. +. +|.|.|+|.|+|
T Consensus 17 ~~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g 83 (750)
T 1bf2_A 17 NITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA------------GSGVWAVTVPVSSIKAAGITGAVYYGYRAWG 83 (750)
T ss_dssp EEEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC------------STTEEEEEEEHHHHHHTTCCSCCEEEEEEEB
T ss_pred EEEEEEECCCCCEEEEEE-EccCCCCccceEEecccC------------CCCEEEEEECCcccccccCCCCEEEEEEEEe
Confidence 388887666 99999998 987653 4678753 4699999986 67 999999999998
Q ss_pred ee
Q 013544 418 QW 419 (441)
Q Consensus 418 eW 419 (441)
.|
T Consensus 84 ~~ 85 (750)
T 1bf2_A 84 PN 85 (750)
T ss_dssp TT
T ss_pred ee
Confidence 54
No 14
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=95.86 E-value=0.02 Score=60.44 Aligned_cols=70 Identities=21% Similarity=0.398 Sum_probs=52.9
Q ss_pred ceEEEEEEec-----CCceEEEEeee---CCCcc--------cc-ccCCCCCCCccccccccCCCcEEEEEEcCCe-eEE
Q 013544 349 LEVVEIQYSG-----DGEIVEVAGSF---NGWHH--------RI-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYE 410 (441)
Q Consensus 349 L~~VTFtW~~-----~AksVeVaGSF---NnW~~--------~I-pM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYE 410 (441)
.+.|+|+... .|..|+|+|+. -+|++ .+ +|.. .....|++++.||+| .+|
T Consensus 581 ~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~------------~~~~~W~~~v~l~~~~~~e 648 (686)
T 1qho_A 581 QTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLA------------PNYPDWFYVFSVPAGKTIQ 648 (686)
T ss_dssp EEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBC------------TTTTSEEEEEEEETTCEEE
T ss_pred eEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhccccc------------CCCCcEEEEEEeCCCCeEE
Confidence 4678888775 37899999998 48987 23 5543 256799999999999 599
Q ss_pred EEEEE---CC--eeecCCCCCcccC
Q 013544 411 IKFIV---DG--QWKVDPQRESVTK 430 (441)
Q Consensus 411 YKFIV---DG--eW~~DPd~PtVtD 430 (441)
|||+| +| .|...|+.-....
T Consensus 649 yKy~~~~~~~~~~We~~~nr~~~~~ 673 (686)
T 1qho_A 649 FKFFIKRADGTIQWENGSNHVATTP 673 (686)
T ss_dssp EEEEEECTTSCEEECCSSCEEEECC
T ss_pred EEEEEEcCCCCEEeCCCCCeeEECC
Confidence 99998 34 4888877665544
No 15
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=95.73 E-value=0.032 Score=58.86 Aligned_cols=74 Identities=22% Similarity=0.315 Sum_probs=54.9
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEE-
Q 013544 348 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 415 (441)
Q Consensus 348 gL~~VTFtW~~----~AksVeVaGSFN---nW~~~--I-pM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIV- 415 (441)
+.+.|+|+... .++.|+|+|+-. +|++. + +|... .+.....|++++.||.| .+||||++
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~---------~~~~~~~W~~~v~lp~~~~~eyK~v~~ 648 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQ---------VVYSYPTWYIDVSVPEGKTIEFKFIKK 648 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCS---------SSSCTTCEEEEEEEESSCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccc---------cCCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 35678898876 389999999874 99875 5 66541 01256799999999988 79999997
Q ss_pred --CC--eeecCCCCCcccC
Q 013544 416 --DG--QWKVDPQRESVTK 430 (441)
Q Consensus 416 --DG--eW~~DPd~PtVtD 430 (441)
+| .|...++.-....
T Consensus 649 ~~~~~~~WE~g~Nr~~~~~ 667 (680)
T 1cyg_A 649 DSQGNVTWESGSNHVYTTP 667 (680)
T ss_dssp CTTSCEEECCSSCEEEECC
T ss_pred eCCCCeEeCCCCCeeEECC
Confidence 44 4888776655444
No 16
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=95.68 E-value=0.0057 Score=63.22 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=50.8
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEE-cCCeeEEEEEEECCe-eecCCCCCc
Q 013544 351 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ-WKVDPQRES 427 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaGSFNnW~~~IpM~kd~ss~~~~~~~tkesG~FsttL~-LpPGrYEYKFIVDGe-W~~DPd~Pt 427 (441)
.|+|+..++ |+.|.|.|.|+ ..++|.+. ..|+|.+.+. +.+|. .|||.|||. ...||-...
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~------------~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD------------EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC------------TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC------------CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 678987776 99999999987 56899874 5799999996 88995 699999997 888986653
No 17
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.61 E-value=0.024 Score=60.07 Aligned_cols=73 Identities=27% Similarity=0.522 Sum_probs=53.5
Q ss_pred eEEEEEEecC---CceEEEEeee---CCCccc--cccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEE---CC
Q 013544 350 EVVEIQYSGD---GEIVEVAGSF---NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV---DG 417 (441)
Q Consensus 350 ~~VTFtW~~~---AksVeVaGSF---NnW~~~--IpM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIV---DG 417 (441)
+.|+|..... |+.|+|+|+- .+|++. ++|.... .+..+..|++++.||+| .+||||+| +|
T Consensus 497 v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~--------~t~~~~~W~~~v~lp~~~~~eYKyvv~~~~g 568 (599)
T 2vn4_A 497 VAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVN--------YADNHPLWIGTVNLEAGDVVEYKYINVGQDG 568 (599)
T ss_dssp EEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTT--------CBTTBCEEEEEEEEETTCEEEEEEEEECTTC
T ss_pred EEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeeccccc--------CCCCCCcEEEEEEcCCCCcEEEEEEEECCCC
Confidence 5688888763 8999999988 489864 6787531 11124799999999998 59999998 34
Q ss_pred --eeecCCCCCcccC
Q 013544 418 --QWKVDPQRESVTK 430 (441)
Q Consensus 418 --eW~~DPd~PtVtD 430 (441)
.|...|+.-....
T Consensus 569 ~~~WE~g~NR~~~~p 583 (599)
T 2vn4_A 569 SVTWESDPNHTYTVP 583 (599)
T ss_dssp CEEECCSSCEEEECC
T ss_pred ceEeCCCCCEEEecC
Confidence 3877776655443
No 18
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=95.50 E-value=0.014 Score=61.71 Aligned_cols=54 Identities=24% Similarity=0.334 Sum_probs=44.0
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc--cccccCCCCCCCccccccccCCCcEEEEEE-cCCeeEEEEEEECCe
Q 013544 351 VVEIQYSGD-GEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ 418 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaGSFNnW~--~~IpM~kd~ss~~~~~~~tkesG~FsttL~-LpPGrYEYKFIVDGe 418 (441)
.|+|+..++ |+.|.|.+ |+++. ..++|.+. ..|+|.+.+. +.+|.+ |+|.|+|.
T Consensus 20 g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 20 GVNFTLFSAHAERVELCV-FDANGQEHRYDLPGH------------SGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEEECSSCSEEEEEE-ECTTCCEEEEECCEE------------ETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCC------------CCCEEEEEECCCCCCCE-EEEEEeee
Confidence 588987766 99999999 98765 35889753 5699999985 788987 99999984
No 19
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=95.30 E-value=0.018 Score=61.60 Aligned_cols=55 Identities=20% Similarity=0.318 Sum_probs=43.8
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc-----cccccCCCCCCCccccccccCCCcEEEEEE-cCCeeEEEEEEECCee
Q 013544 351 VVEIQYSGD-GEIVEVAGSFNGWH-----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQW 419 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaGSFNnW~-----~~IpM~kd~ss~~~~~~~tkesG~FsttL~-LpPGrYEYKFIVDGeW 419 (441)
.|+|...++ |+.|.|.+ |+.+. ..++|.+. ..|+|.+.+. +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~------------~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNK------------TGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEE------------SSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccC------------CCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 688987666 99999999 87554 24788753 5799999985 789988 999999864
No 20
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=95.20 E-value=0.019 Score=60.21 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=48.9
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeeecCCCCCcc
Q 013544 351 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV 428 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaGSFNnW~~~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~~DPd~PtV 428 (441)
.|+|+..++ ++.|.|.|. ...++|.+. ..|+|++.+.+.+|.+ |+|.|||....||-...+
T Consensus 35 ~~~f~vwap~a~~v~l~~~----~~~~~m~~~------------~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~ 96 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN----GTEHVMTSL------------GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFL 96 (602)
T ss_dssp CEEEEEECSSCSSEEEEET----TEEEECEEE------------ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCC
T ss_pred eEEEEEECCCCCEEEEEEc----CCEEeCeeC------------CCcEEEEEEECCCCcE-EEEEECCeEecCCCcccc
Confidence 688886666 999999994 246889863 4689999999889986 999999977778866554
No 21
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.17 E-value=0.038 Score=58.29 Aligned_cols=73 Identities=22% Similarity=0.324 Sum_probs=53.0
Q ss_pred ceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEE-C
Q 013544 349 LEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D 416 (441)
Q Consensus 349 L~~VTFtW~~----~AksVeVaGSFN---nW~~~--I-pM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIV-D 416 (441)
.+.|+|+... .+..|+|+|+-. +|++. + +|... .+.....|++++.||.| .+||||++ |
T Consensus 583 ~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~---------~~~~~~~W~~~v~lp~~~~~eyK~~~~~ 653 (683)
T 3bmv_A 583 QICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQ---------VVYQYPTWYYDVSVPAGTTIQFKFIKKN 653 (683)
T ss_dssp EEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCS---------SSSCTTSEEEEEEEETTCEEEEEEEEES
T ss_pred eEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccc---------CCCCCCcEEEEEEeCCCCcEEEEEEEEc
Confidence 5678898876 379999999885 99864 5 67641 01256799999999998 79999997 3
Q ss_pred C---eeecCCCCCcccC
Q 013544 417 G---QWKVDPQRESVTK 430 (441)
Q Consensus 417 G---eW~~DPd~PtVtD 430 (441)
+ .|...++.-....
T Consensus 654 ~~~~~WE~g~Nr~~~~~ 670 (683)
T 3bmv_A 654 GNTITWEGGSNHTYTVP 670 (683)
T ss_dssp SSCCEECCSSCEEEECC
T ss_pred CCceEecCCCCeeEECC
Confidence 2 4666665544443
No 22
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=94.85 E-value=0.054 Score=57.23 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=52.8
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEE-
Q 013544 348 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 415 (441)
Q Consensus 348 gL~~VTFtW~~----~AksVeVaGSFN---nW~~~--I-pM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIV- 415 (441)
..+.|+|+... .+..|+|+|+-. +|++. + +|... .+.....|++++.||.| .+||||++
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~---------~~~~~~~W~~~v~lp~~~~~eyK~~~~ 655 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQ---------VVYQYPNWYYDVSVPAGKTIEFKFLKK 655 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCS---------SSSCTTCEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccc---------cCCCCCeEEEEEEeCCCCcEEEEEEEE
Confidence 34678888866 389999999885 99874 5 56541 01256799999999998 79999997
Q ss_pred C-C--eeecCCCCCcccC
Q 013544 416 D-G--QWKVDPQRESVTK 430 (441)
Q Consensus 416 D-G--eW~~DPd~PtVtD 430 (441)
| + .|...++.-....
T Consensus 656 ~~~~~~WE~g~Nr~~~~~ 673 (686)
T 1d3c_A 656 QGSTVTWEGGSNHTFTAP 673 (686)
T ss_dssp ETTEEEECCSSCEEEECC
T ss_pred cCCceEecCCCCeEEECC
Confidence 3 2 3666665544433
No 23
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=94.65 E-value=0.063 Score=55.96 Aligned_cols=71 Identities=20% Similarity=0.288 Sum_probs=51.9
Q ss_pred ceEEEEEEec----CCceEEEEeeeC---CCccc---cccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEE-C
Q 013544 349 LEVVEIQYSG----DGEIVEVAGSFN---GWHHR---IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D 416 (441)
Q Consensus 349 L~~VTFtW~~----~AksVeVaGSFN---nW~~~---IpM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIV-D 416 (441)
.+.|+|.... .|+.|+|+|+-. +|++. ++|... ..++.|++++.||.| .+||||+| |
T Consensus 419 ~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-----------~~p~~W~~~v~lp~~~~~eYKyv~~~ 487 (516)
T 1vem_A 419 PVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-----------SHSNDWRGNVVLPAERNIEFKAFIKS 487 (516)
T ss_dssp EEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-----------TTTTEEEEEEEEETTCCEEEEEEEEC
T ss_pred ccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-----------CCCCEEEEEEEECCCCcEEEEEEEEe
Confidence 5788998865 289999999884 89875 356431 234599999999998 59999998 3
Q ss_pred --C---eeecCCCCCcccC
Q 013544 417 --G---QWKVDPQRESVTK 430 (441)
Q Consensus 417 --G---eW~~DPd~PtVtD 430 (441)
| .|...++.-....
T Consensus 488 ~~g~v~~WE~g~NR~~~~p 506 (516)
T 1vem_A 488 KDGTVKSWQTIQQSWNPVP 506 (516)
T ss_dssp TTSCEEEECSSCEEESSCC
T ss_pred CCCCeeEEeCCCCEEEecC
Confidence 3 4777766554443
No 24
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=93.79 E-value=0.072 Score=55.09 Aligned_cols=59 Identities=14% Similarity=0.057 Sum_probs=42.1
Q ss_pred eEEEEE-EecCCceEEE-EeeeCCCcc----ccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEEC
Q 013544 350 EVVEIQ-YSGDGEIVEV-AGSFNGWHH----RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 416 (441)
Q Consensus 350 ~~VTFt-W~~~AksVeV-aGSFNnW~~----~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVD 416 (441)
..+.|. |...++.|.| .|+|++|+. .++|.+... +...|+|++.+......+.|||.|.
T Consensus 23 ~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~--------~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 23 LRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGS--------DERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp EEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEE--------CSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeec--------CCCEEEEEEEEECCCCeEEEEEEEE
Confidence 444554 3345899999 899999964 578986410 1124579999988777789999885
No 25
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=93.67 E-value=0.071 Score=56.84 Aligned_cols=66 Identities=18% Similarity=0.201 Sum_probs=48.7
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-cCCeeEEEEEEEC--Cee--ecCC
Q 013544 351 VVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD--GQW--KVDP 423 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaGSFNnW~~-~IpM~kd~ss~~~~~~~tkesG~FsttL~-LpPGrYEYKFIVD--GeW--~~DP 423 (441)
.|+|+..++ |..|.|.+.|++|.. .++|.+. ..|+|.+.+. +.+|. .|+|.|+ |.| ..||
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DP 180 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL------------EKGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQ 180 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEEC------------GGGEEEEEEESCCTTC-EEEEEEEETTEEEEECCT
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccC------------CCCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCC
Confidence 688987776 999999999998864 4789864 4689999987 56773 4666665 764 5687
Q ss_pred CCCccc
Q 013544 424 QRESVT 429 (441)
Q Consensus 424 d~PtVt 429 (441)
-...+.
T Consensus 181 ya~~~~ 186 (718)
T 2e8y_A 181 YAKAVT 186 (718)
T ss_dssp TCSSBC
T ss_pred cccccc
Confidence 665443
No 26
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=93.14 E-value=0.077 Score=59.94 Aligned_cols=68 Identities=18% Similarity=0.105 Sum_probs=50.7
Q ss_pred eEEEEEEecC-CceEEEEe-eeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-cCCeeEEEEEEEC------Ce-
Q 013544 350 EVVEIQYSGD-GEIVEVAG-SFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD------GQ- 418 (441)
Q Consensus 350 ~~VTFtW~~~-AksVeVaG-SFNnW~~-~IpM~kd~ss~~~~~~~tkesG~FsttL~-LpPGrYEYKFIVD------Ge- 418 (441)
..|+|...++ |..|.|.+ +|++|.. .++|.+. ...|+|.+.+. +.+|.| |+|.|+ |.
T Consensus 304 ~gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-----------~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~ 371 (1083)
T 2fhf_A 304 SGVTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-----------SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKV 371 (1083)
T ss_dssp TEEEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-----------TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEE
T ss_pred CeEEEEEECCCCCEEEEEEEcCCCCccceEECeEC-----------CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCcc
Confidence 3588987776 99999999 8899974 4788753 25699999985 788976 888885 43
Q ss_pred ---eecCCCCCccc
Q 013544 419 ---WKVDPQRESVT 429 (441)
Q Consensus 419 ---W~~DPd~PtVt 429 (441)
...||-...+.
T Consensus 372 ~~~~~~DPYa~~~~ 385 (1083)
T 2fhf_A 372 EQYEVTDPYAHSLS 385 (1083)
T ss_dssp EEEEECCTTCSCBC
T ss_pred ccceecCCccceec
Confidence 46787665443
No 27
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=92.36 E-value=0.1 Score=54.05 Aligned_cols=60 Identities=15% Similarity=0.172 Sum_probs=42.7
Q ss_pred ceEEEEE-EecCCceEEE-EeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEEC
Q 013544 349 LEVVEIQ-YSGDGEIVEV-AGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 416 (441)
Q Consensus 349 L~~VTFt-W~~~AksVeV-aGSFNnW~~------~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVD 416 (441)
..++.|+ |...++.|.| .|+|++|+. .++|.+..+ +...|+|++.+......+.|+|.|.
T Consensus 22 ~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~--------~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 22 TLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGS--------DELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp CEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEE--------CSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred EEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeec--------CCCeEEEEEEEECCCcEEEEEEEEE
Confidence 3556665 3445999999 799999964 578986410 1124579999987777788899885
No 28
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=91.76 E-value=0.092 Score=58.06 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=48.9
Q ss_pred EEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEcCCee-----EEEEEEECC--e-
Q 013544 352 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGT-----YEIKFIVDG--Q- 418 (441)
Q Consensus 352 VTFtW~~~-AksVeVaG-SFNnW~~---~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGr-----YEYKFIVDG--e- 418 (441)
|.|+..++ |..|+|.+ ++++|.. .++|.+. ..|+|.+.+.+.||. +.|+|.|++ .
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~ 213 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN------------NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDK 213 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC------------TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC------------CCCEEEEEECCCCCCccCCCeEEEEEEeeCCce
Confidence 88997776 99999998 6778853 5789763 579999999777762 678888863 3
Q ss_pred -eecCCCCCcc
Q 013544 419 -WKVDPQRESV 428 (441)
Q Consensus 419 -W~~DPd~PtV 428 (441)
...||-...+
T Consensus 214 ~~~~DPYA~~~ 224 (877)
T 3faw_A 214 VKILDPYAKSL 224 (877)
T ss_dssp EEECCTTCSCB
T ss_pred eEecCccceec
Confidence 5668876543
No 29
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=91.39 E-value=0.28 Score=51.78 Aligned_cols=62 Identities=19% Similarity=0.232 Sum_probs=47.3
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEE-EcCCeeEEEEEEEC-CeeecCCCCCc
Q 013544 351 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVL-WLYPGTYEIKFIVD-GQWKVDPQRES 427 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaGSFNnW~~~IpM~kd~ss~~~~~~~tkesG~FsttL-~LpPGrYEYKFIVD-GeW~~DPd~Pt 427 (441)
.|+|+..++ |+.|.|.+ +|. .++|.+. ..|.|.+.+ .+.+|. .|||.|+ |..+.||-...
T Consensus 43 ~~~F~vwap~a~~v~l~~---~~~-~~~m~~~------------~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~ 105 (618)
T 3m07_A 43 VVRFRLWATGQQKVMLRL---AGK-DQEMQAN------------GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRA 105 (618)
T ss_dssp EEEEEEECTTCSCEEEEE---TTE-EEECEEC------------STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEE---CCC-cccCeec------------CCEEEEEEeCCCCCCC-EEEEEEeCCeEecccccee
Confidence 588987776 89999998 353 4789864 568999988 478886 5899995 56888987655
Q ss_pred cc
Q 013544 428 VT 429 (441)
Q Consensus 428 Vt 429 (441)
..
T Consensus 106 ~~ 107 (618)
T 3m07_A 106 QK 107 (618)
T ss_dssp BS
T ss_pred ee
Confidence 43
No 30
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=91.23 E-value=0.24 Score=54.75 Aligned_cols=63 Identities=16% Similarity=0.243 Sum_probs=46.6
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc----cccccCCCCCCCccccccccCCCcEEEEEE-cCCeeEEEEEEE--CCe--ee
Q 013544 351 VVEIQYSGD-GEIVEVAGSFNGWH----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV--DGQ--WK 420 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaGSFNnW~----~~IpM~kd~ss~~~~~~~tkesG~FsttL~-LpPGrYEYKFIV--DGe--W~ 420 (441)
.|+|+..++ |..|.|.+ |++|. ..++|.+. ..|+|.+.+. +.+|.+ |+|.| +|. ..
T Consensus 326 gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~g~~-Y~y~v~~~g~~~~~ 391 (921)
T 2wan_A 326 ATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS------------DNGTWKLQVSGNLENWY-YLYQVTVNGTTQTA 391 (921)
T ss_dssp EEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC------------GGGEEEEEEESCCTTCE-EEEEEECSSCEEEE
T ss_pred eEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC------------CCCEEEEEEccCCCCCE-EEEEEEeCCeEEEe
Confidence 688987776 99999997 99994 35789864 4689999986 567753 66666 565 45
Q ss_pred cCCCCCc
Q 013544 421 VDPQRES 427 (441)
Q Consensus 421 ~DPd~Pt 427 (441)
.||-...
T Consensus 392 ~DPya~~ 398 (921)
T 2wan_A 392 VDPYARA 398 (921)
T ss_dssp CCTTCSS
T ss_pred cCCccee
Confidence 6776543
No 31
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=91.20 E-value=0.16 Score=53.83 Aligned_cols=92 Identities=16% Similarity=-0.004 Sum_probs=55.0
Q ss_pred HhhhhhhhhhhhhhhcccccccccchHHHHHHHHhcCCc------eEEEEEEecC-CceEEEEeeeCCCcccc--ccCCC
Q 013544 311 KLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGL------EVVEIQYSGD-GEIVEVAGSFNGWHHRI--KMDPL 381 (441)
Q Consensus 311 K~~lsvlq~K~~~~i~~A~~Ll~eKd~~LdaAe~aLsgL------~~VTFtW~~~-AksVeVaGSFNnW~~~I--pM~kd 381 (441)
|.+|.|.+.-+.-.+..|..+= -...||+.-.--..+ ..|+|...++ |+.|.|.+-+++|.... .|.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~q--~~~~~d~~~~y~~plGa~~~~~g~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~- 169 (884)
T 4aio_A 93 KCQLVVASFGADGKHVDVTGLQ--LPGVLDDMFAYTGPLGAVFSEDSVSLHLWAPTAQGVSVCFFDGPAGPALETVQLK- 169 (884)
T ss_dssp TSEEEEEEECTTSSEEEEEEEE--CHHHHHHHHCCCSCCEEEECSSEEEEEEECTTCSEEEEEEESTTTSCEEEEEECE-
T ss_pred hcceEEEEECCCCCEeeccccc--cCcccccccccCCCccCEEECCEEEEEEECCCCCEEEEEEEeCCCCCeeeeeeec-
Confidence 3456665544444444443221 123456544321112 3589997776 99999999655665542 2322
Q ss_pred CCCCccccccccCCCcEEEEEE-cCCeeEEEEEEECC
Q 013544 382 PSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDG 417 (441)
Q Consensus 382 ~ss~~~~~~~tkesG~FsttL~-LpPGrYEYKFIVDG 417 (441)
...|+|++.+. +.+|.| |+|.|+|
T Consensus 170 -----------~~~g~W~~~~~~~~~g~~-Y~y~v~~ 194 (884)
T 4aio_A 170 -----------ESNGVWSVTGPREWENRY-YLYEVDV 194 (884)
T ss_dssp -----------EETTEEEEEEEGGGTTCE-EEEEEEE
T ss_pred -----------CCCCEEEEEECCCCCCCE-EEEEEeC
Confidence 25799999996 678864 8888875
No 32
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=91.13 E-value=0.22 Score=53.13 Aligned_cols=64 Identities=17% Similarity=0.285 Sum_probs=46.7
Q ss_pred EEEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEc--CCe-----eEEEEEEEC--
Q 013544 351 VVEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWL--YPG-----TYEIKFIVD-- 416 (441)
Q Consensus 351 ~VTFtW~~~-AksVeVaG-SFNnW~~---~IpM~kd~ss~~~~~~~tkesG~FsttL~L--pPG-----rYEYKFIVD-- 416 (441)
.|+|...++ |+.|.|.+ ++++|.. .++|.+. ..|+|.+.+.- .+| -+.|+|.|+
T Consensus 25 gv~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~ 92 (714)
T 2ya0_A 25 QVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQ 92 (714)
T ss_dssp EEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSSCSCCTTCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC------------CCCEEEEEECCccCCCccccCCcEEEEEEEeC
Confidence 388987766 99999999 7888864 5789763 46999998863 134 267888886
Q ss_pred Ce--eecCCCCC
Q 013544 417 GQ--WKVDPQRE 426 (441)
Q Consensus 417 Ge--W~~DPd~P 426 (441)
|. -..||-..
T Consensus 93 ~~~~~~~DPya~ 104 (714)
T 2ya0_A 93 GKTVLALDPYAK 104 (714)
T ss_dssp TEEEEECCTTCS
T ss_pred CceEEecCCcee
Confidence 64 35788654
No 33
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=90.92 E-value=0.043 Score=56.06 Aligned_cols=70 Identities=20% Similarity=0.411 Sum_probs=0.0
Q ss_pred ceEEEEEE-ec---CCceEEEEeeeC---CCccc--cccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEE-C-
Q 013544 349 LEVVEIQY-SG---DGEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 416 (441)
Q Consensus 349 L~~VTFtW-~~---~AksVeVaGSFN---nW~~~--IpM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIV-D- 416 (441)
.+.|+|+. .. .++.|+|+|+-. +|++. ++|... .....|++++.||+| .+||||+| |
T Consensus 430 ~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-----------~~~~~W~~~v~lp~~~~~eyKy~~~~~ 498 (527)
T 1gcy_A 430 LVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-----------SGYPTWKGSIALPAGQNEEWKCLIRNE 498 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-----------CCCCeEEEEEEeCCCCcEEEEEEEEeC
Confidence 35677776 32 389999999885 89873 678631 146789999999999 59999996 3
Q ss_pred -C-----eeecCCCCCccc
Q 013544 417 -G-----QWKVDPQRESVT 429 (441)
Q Consensus 417 -G-----eW~~DPd~PtVt 429 (441)
| .|...|+.-...
T Consensus 499 ~~~~~~~~We~g~nr~~~~ 517 (527)
T 1gcy_A 499 ANATQVRQWQGGANNSLTP 517 (527)
T ss_dssp -------------------
T ss_pred CCCcceeEecCCCCeeEEC
Confidence 3 377666655433
No 34
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=87.83 E-value=0.53 Score=52.00 Aligned_cols=51 Identities=22% Similarity=0.419 Sum_probs=37.9
Q ss_pred cCCceEEEEeee-------CCCccccc---cCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeee
Q 013544 358 GDGEIVEVAGSF-------NGWHHRIK---MDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 420 (441)
Q Consensus 358 ~~AksVeVaGSF-------NnW~~~Ip---M~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~ 420 (441)
..+..+.+.|+| .+|++.-. |.+ ..+|.|+.+-.||+|.||||+.++|.|.
T Consensus 161 ~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~------------~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 161 ANPVTAVLVGDLQQALGAANNWSPDDDHTLLKK------------INPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEE------------EETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred ccccccccccchhhhccccccCCCCCCcceeec------------cCCcceeeeeccCCcceeEEEeecCccc
Confidence 345678888876 46765421 321 1478999999999999999999998884
No 35
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=86.11 E-value=0.64 Score=52.01 Aligned_cols=63 Identities=17% Similarity=0.299 Sum_probs=45.6
Q ss_pred EEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEcC--Ce-----eEEEEEEEC--C
Q 013544 352 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLY--PG-----TYEIKFIVD--G 417 (441)
Q Consensus 352 VTFtW~~~-AksVeVaG-SFNnW~~---~IpM~kd~ss~~~~~~~tkesG~FsttL~Lp--PG-----rYEYKFIVD--G 417 (441)
|+|...++ |..|.|.+ +|++|.. .++|.+. ..|+|.+.+.-. +| -+.|+|.|+ |
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~ 400 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQG 400 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSCCSCCTTCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccC------------CCCEEEEEEcccccCCccccCCcEEEEEEEeCC
Confidence 78987776 99999999 7888864 5789763 568999988631 23 256788885 5
Q ss_pred e--eecCCCCC
Q 013544 418 Q--WKVDPQRE 426 (441)
Q Consensus 418 e--W~~DPd~P 426 (441)
. ...||-..
T Consensus 401 ~~~~~~DPYa~ 411 (1014)
T 2ya1_A 401 KTVLALDPYAK 411 (1014)
T ss_dssp EEEEECCTTCS
T ss_pred eEEEecCccce
Confidence 4 45788543
No 36
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=86.10 E-value=0.34 Score=50.59 Aligned_cols=60 Identities=10% Similarity=0.115 Sum_probs=41.3
Q ss_pred eEEEEEEe----cC-CceEEEEeeeCCCccccccCC--CCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECC
Q 013544 350 EVVEIQYS----GD-GEIVEVAGSFNGWHHRIKMDP--LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDG 417 (441)
Q Consensus 350 ~~VTFtW~----~~-AksVeVaGSFNnW~~~IpM~k--d~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDG 417 (441)
..|+|+.. ++ ++.|.|.+.|++=...++|.+ ... +...|+|++.+........|+|.|+|
T Consensus 30 ~~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~~--------~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 30 QSVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSNDP--------TGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEECT--------TSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred CEEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeeccc--------cCCeeEEEEEEECCCceEEEEEEEEE
Confidence 35778755 44 899999999875223478976 210 12357999999865556679999975
No 37
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=85.64 E-value=0.19 Score=52.07 Aligned_cols=59 Identities=19% Similarity=0.240 Sum_probs=40.9
Q ss_pred eEEEEE-EecCCceEEE-EeeeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEEC
Q 013544 350 EVVEIQ-YSGDGEIVEV-AGSFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 416 (441)
Q Consensus 350 ~~VTFt-W~~~AksVeV-aGSFNnW~~---~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVD 416 (441)
..+.|. |...+++|.| .|+|++|.. .++|.+... +...|+|++.+......+.|||.|.
T Consensus 23 ~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~--------~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 23 VHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLAT--------DELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp EECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEE--------CSSCEEECCEECCTTSCEEECBCCE
T ss_pred EEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEec--------cCCeEEEEEEEECCCceEEEEEEEE
Confidence 444454 3345899999 799999975 478986410 1124679999987767778888773
No 38
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=78.74 E-value=1.3 Score=40.62 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=39.1
Q ss_pred CceEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeee
Q 013544 360 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 420 (441)
Q Consensus 360 AksVeVaGSFNnW~~--~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~ 420 (441)
.++++|+|++++|.. ..+|.+.. ...|.|...+.|+.|. +|||.-+..|-
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~----------~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred cceEEEEecCCCCCCCccceeeecc----------CCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 688999999998863 36776542 2579999999998774 89999876654
No 39
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=78.58 E-value=3.9 Score=34.57 Aligned_cols=65 Identities=17% Similarity=0.286 Sum_probs=47.1
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEECC--eeecC
Q 013544 350 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDG--QWKVD 422 (441)
Q Consensus 350 ~~VTFtW~~~AksVeVaGSFN--nW~~~--IpM~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIVDG--eW~~D 422 (441)
..|++.|..+...|+|==.+. +|... ++|.+. .-.|.|..+|.|+.+ .++|+| -|| .|-.+
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-----------~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN 77 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-----------EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNN 77 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-----------SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECG
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-----------ccCCceEEEEecCCCceEEEEE-eCCCcccccC
Confidence 467888887788888875564 48753 789752 136888999999965 899999 665 49765
Q ss_pred CCCC
Q 013544 423 PQRE 426 (441)
Q Consensus 423 Pd~P 426 (441)
....
T Consensus 78 ~g~N 81 (102)
T 2c3v_A 78 QGRD 81 (102)
T ss_dssp GGTC
T ss_pred CCcc
Confidence 5444
No 40
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.65 E-value=11 Score=37.81 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=34.5
Q ss_pred CceEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEEC
Q 013544 360 GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 416 (441)
Q Consensus 360 AksVeVaGSFNnW~~~--IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVD 416 (441)
....+|.|++++|... .+|.++. ...+.|.....+..+. +|||+.-
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDA----------LDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECS----------SCTTEEEEEEEESSCC-EEEEEEG
T ss_pred cceeEEEcccCCCCcccCeeeeeec----------CCCceEEEEEEeccCc-eEEEeec
Confidence 4678999999999854 3454432 3678999998887766 7999964
No 41
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=52.27 E-value=12 Score=31.43 Aligned_cols=30 Identities=20% Similarity=0.381 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhcCCCCCC-CCChHHHHHh
Q 013544 62 EELYNDLREFLSTVGLSESH-VPSMKELSAH 91 (441)
Q Consensus 62 ~~l~~d~~ef~s~~~lp~~~-vps~kel~~h 91 (441)
+.+++.|++.+-.-.|+||. +||.+||+++
T Consensus 17 ~QI~~~i~~~I~~G~l~pG~~LPser~La~~ 47 (134)
T 4ham_A 17 EQIVQKIKEQVVKGVLQEGEKILSIREFASR 47 (134)
T ss_dssp HHHHHHHHHHHHHTSSCTTCEECCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCccHHHHHHH
Confidence 67899999999999999996 9999999875
No 42
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.08 E-value=34 Score=30.75 Aligned_cols=71 Identities=11% Similarity=0.267 Sum_probs=46.2
Q ss_pred EEEEEEecC--CceEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEcCC-----e--eEEEEEEECCe-
Q 013544 351 VVEIQYSGD--GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYP-----G--TYEIKFIVDGQ- 418 (441)
Q Consensus 351 ~VTFtW~~~--AksVeVaGSFNnW~~~--IpM~kd~ss~~~~~~~tkesG~FsttL~LpP-----G--rYEYKFIVDGe- 418 (441)
.-++...+- .+.|.|-=+||+|+.. +++.+.+. ..+......|..+|.||+ + .+-++|-|+|.
T Consensus 49 ~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~-----~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~e 123 (156)
T 2eef_A 49 AGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKD-----TYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQT 123 (156)
T ss_dssp EEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCC-----SSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTEE
T ss_pred EEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccc-----cCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCCE
Confidence 344445442 7999999999999875 34443321 111123458998988886 3 57789999996
Q ss_pred -eecCCCCC
Q 013544 419 -WKVDPQRE 426 (441)
Q Consensus 419 -W~~DPd~P 426 (441)
|-.+....
T Consensus 124 yWDNN~G~N 132 (156)
T 2eef_A 124 YWDSNRGKN 132 (156)
T ss_dssp EEESGGGSC
T ss_pred EecCCCCee
Confidence 76655444
No 43
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=51.14 E-value=13 Score=30.42 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhcCCCCCC-CCChHHHHHhchh
Q 013544 62 EELYNDLREFLSTVGLSESH-VPSMKELSAHGRD 94 (441)
Q Consensus 62 ~~l~~d~~ef~s~~~lp~~~-vps~kel~~hgr~ 94 (441)
..+++.|++.+..-.||||. +||.+||+++=.+
T Consensus 12 ~~i~~~i~~~I~~g~~~~G~~lPs~~~La~~~~v 45 (113)
T 3tqn_A 12 QQLRDKIVEAIIDGSYVEGEMIPSIRKISTEYQI 45 (113)
T ss_dssp HHHHHHHHHHHHHTSSCTTCEECCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCCCCCcCcCHHHHHHHHCc
Confidence 57899999999999999986 8999999987444
No 44
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=47.76 E-value=14 Score=37.01 Aligned_cols=53 Identities=15% Similarity=0.322 Sum_probs=36.8
Q ss_pred CceEEEEeeeCCCccc-------cccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeeecCC
Q 013544 360 GEIVEVAGSFNGWHHR-------IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDP 423 (441)
Q Consensus 360 AksVeVaGSFNnW~~~-------IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~~DP 423 (441)
...++|+|++++|.-. .+|.+. ....+.|.....+..| .+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPV----------NGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEEC----------TTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccc----------cCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 4679999999888532 123221 1357888888877654 589999998886654
No 45
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=44.96 E-value=33 Score=28.98 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=42.6
Q ss_pred EEEEEEecC--CceEEEEee--eCCCcc-ccc--cCCCCCCCccccccccCCCcEEEEEEcCCe-eEEEEEEECCe--ee
Q 013544 351 VVEIQYSGD--GEIVEVAGS--FNGWHH-RIK--MDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDGQ--WK 420 (441)
Q Consensus 351 ~VTFtW~~~--AksVeVaGS--FNnW~~-~Ip--M~kd~ss~~~~~~~tkesG~FsttL~LpPG-rYEYKFIVDGe--W~ 420 (441)
.-++...+- .+.|.|-=+ ||+|+. ... ....+ . .+...-..|...+.||+. .+-.+|.|+|. |-
T Consensus 22 ~GtV~V~NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~-----~-~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWD 95 (106)
T 2djm_A 22 SGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAASFSG-----P-ISGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYD 95 (106)
T ss_dssp EEEEEECCSSSCEEEEEEEEETTSSCSSCCCEEECEEEE-----E-CTTSSCEEEEEEECCSSEEEEEEEEEESSCEEEE
T ss_pred EEEEEEeecCcCcEEEEEECCCcCCCccccEEEEEEEec-----C-CCCCCeEEEEEEEECCCCeEEEEEEEECCcEEEc
Confidence 344455543 588888877 999987 422 22110 0 112245689999999876 67889999996 65
Q ss_pred cCC
Q 013544 421 VDP 423 (441)
Q Consensus 421 ~DP 423 (441)
.+.
T Consensus 96 NN~ 98 (106)
T 2djm_A 96 NNN 98 (106)
T ss_dssp CSS
T ss_pred CCC
Confidence 443
No 46
>3neu_A LIN1836 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; 1.58A {Listeria innocua}
Probab=43.23 E-value=22 Score=29.56 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=28.7
Q ss_pred cHHHHHHHHHHHHhcCCCCC-CCCChHHHHHhchh
Q 013544 61 NEELYNDLREFLSTVGLSES-HVPSMKELSAHGRD 94 (441)
Q Consensus 61 ~~~l~~d~~ef~s~~~lp~~-~vps~kel~~hgr~ 94 (441)
-..++..|++.+-.-.+||| .+||.+||+++=.+
T Consensus 15 ~~~i~~~i~~~I~~g~~~~g~~Lps~~~La~~~~v 49 (125)
T 3neu_A 15 YSQISDWMKKQMITGEWKGEDKLPSVREMGVKLAV 49 (125)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCCCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHCc
Confidence 35789999999999999988 58999999987444
No 47
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=41.34 E-value=23 Score=31.29 Aligned_cols=25 Identities=32% Similarity=0.461 Sum_probs=20.5
Q ss_pred EEEEcCCe-eEEEEEEECCeeecCCCC
Q 013544 400 TVLWLYPG-TYEIKFIVDGQWKVDPQR 425 (441)
Q Consensus 400 ttL~LpPG-rYEYKFIVDGeW~~DPd~ 425 (441)
.++.|..| .|.|+| ++|+|+.+-+-
T Consensus 98 ~svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 98 RKVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred cEEEecCCCEEEEEE-cCCEEEEcccc
Confidence 34678899 899999 99999987653
No 48
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=37.22 E-value=36 Score=29.28 Aligned_cols=65 Identities=8% Similarity=0.184 Sum_probs=53.2
Q ss_pred chhhhHHHHHhhhh--HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccccc--c-----hHHHHHHHHhc
Q 013544 282 NQLEIDHLKFMLHQ--KEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISD--K-----DEELIAAEESL 346 (441)
Q Consensus 282 n~~e~~~l~~m~~q--~ele~~r~k~q~e~~K~~lsvlq~K~~~~i~~A~~Ll~e--K-----d~~LdaAe~aL 346 (441)
=+-+-+++..|-.+ ++-++.+..+-+.++++++--++.|...++.+-+.+|.+ . ..++.+|++.|
T Consensus 31 ~~~q~~kiekmk~e~~dey~iKkq~evL~Et~~mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l 104 (116)
T 3mxz_A 31 VEREAAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTV 104 (116)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHH
Confidence 34455677777764 678999999999999999999999999999999998883 1 45888888775
No 49
>3ic7_A Putative transcriptional regulator; helix-turn-helix, structural genomics, PSI-2, protein struct initiative; 2.82A {Bacteroides thetaiotaomicron}
Probab=30.98 E-value=19 Score=30.10 Aligned_cols=30 Identities=13% Similarity=0.210 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhcCCCCCC-CCChHHHHHh
Q 013544 62 EELYNDLREFLSTVGLSESH-VPSMKELSAH 91 (441)
Q Consensus 62 ~~l~~d~~ef~s~~~lp~~~-vps~kel~~h 91 (441)
..++..|++.+-.-.||||. +||.+||+++
T Consensus 14 ~~i~~~l~~~I~~g~~~~G~~lPs~~~La~~ 44 (126)
T 3ic7_A 14 LQIADRICDDILLGQYEEEGRIPSVREYASI 44 (126)
T ss_dssp THHHHHHHHHHHTTSSCBTSEECCTTTTTTC
T ss_pred HHHHHHHHHHHHhCCCCCCCcCcCHHHHHHH
Confidence 57899999999999999986 7999999976
No 50
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=28.96 E-value=32 Score=33.20 Aligned_cols=51 Identities=12% Similarity=0.079 Sum_probs=37.5
Q ss_pred CceEEEEeeeCCCc--cccccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCeeec
Q 013544 360 GEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKV 421 (441)
Q Consensus 360 AksVeVaGSFNnW~--~~IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW~~ 421 (441)
...++|+|+..+|. ...+|.+.. ...|.|.....|+.| .+|||+-+..|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~----------~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeecc----------CCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 57899999997664 335565432 357899999999876 6799998766543
No 51
>2ek5_A Predicted transcriptional regulators; helix-turn-helix, interwined alpha helices; 2.20A {Corynebacterium glutamicum atcc 13032} PDB: 2du9_A
Probab=28.69 E-value=49 Score=27.82 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhcCCCCC-CCCChHHHHHhc
Q 013544 62 EELYNDLREFLSTVGLSES-HVPSMKELSAHG 92 (441)
Q Consensus 62 ~~l~~d~~ef~s~~~lp~~-~vps~kel~~hg 92 (441)
..++..|++.+-.-.|+|| .+||.+||++.=
T Consensus 7 ~~i~~~i~~~I~~g~l~~G~~LPse~~La~~~ 38 (129)
T 2ek5_A 7 KQIASLIEDSIVDGTLSIDQRVPSTNELAAFH 38 (129)
T ss_dssp HHHHHHHHHHHHTTSSCTTSCBCCHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCCCcCcCHHHHHHHH
Confidence 5688899999999899887 589999999863
No 52
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=28.43 E-value=86 Score=26.58 Aligned_cols=64 Identities=17% Similarity=0.292 Sum_probs=44.5
Q ss_pred chhhhHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccccccccchHHHHHHHHh
Q 013544 282 NQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 345 (441)
Q Consensus 282 n~~e~~~l~~m~~q~ele~~r~k~q~e~~K~~lsvlq~K~~~~i~~A~~Ll~eKd~~LdaAe~a 345 (441)
...||.+++..+..-+.|+.-++.+...-..+|+-++.+-+.++..++..|.....+|..++..
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 97 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQD 97 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3457888877777666666666655555556677777777888888888887777766666544
No 53
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=26.44 E-value=74 Score=27.15 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=37.6
Q ss_pred hhhhHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccccccccchHHHHHHHHh
Q 013544 283 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 345 (441)
Q Consensus 283 ~~e~~~l~~m~~q~ele~~r~k~q~e~~K~~lsvlq~K~~~~i~~A~~Ll~eKd~~LdaAe~a 345 (441)
..||.+++..+..-+.|+.-++.+...-..+|+-++.+-+.++..++..|.....+|..++..
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 99 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCE 99 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666555555555544444445566677777777777877777776666665543
No 54
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=24.29 E-value=1.2e+02 Score=25.02 Aligned_cols=50 Identities=24% Similarity=0.303 Sum_probs=33.2
Q ss_pred hhhHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccccccccchHHHHHHHH
Q 013544 284 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEE 344 (441)
Q Consensus 284 ~e~~~l~~m~~q~ele~~r~k~q~e~~K~~lsvlq~K~~~~i~~A~~Ll~eKd~~LdaAe~ 344 (441)
-||++|++=+.--|-|-.|-...+--||+.|+.||- .|..|++++...+.
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~-----------qLe~kd~ei~rL~~ 75 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQE-----------QVALKDAEIERLHS 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH-----------HHHhhHHHHHHHHH
Confidence 478888877666555666667778888988877654 44455555554443
No 55
>3edp_A LIN2111 protein; APC88337, listeria innocua CLIP11262, structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.09A {Listeria innocua}
Probab=23.07 E-value=63 Score=29.55 Aligned_cols=32 Identities=9% Similarity=0.112 Sum_probs=26.2
Q ss_pred cHHHHHHHHHHHHhcCCCCC-CCCChHHHHHhc
Q 013544 61 NEELYNDLREFLSTVGLSES-HVPSMKELSAHG 92 (441)
Q Consensus 61 ~~~l~~d~~ef~s~~~lp~~-~vps~kel~~hg 92 (441)
-..+.++|++-+..-.+++| .+||.+||+++=
T Consensus 11 ~~~i~~~l~~~I~~g~~~~g~~lPse~~La~~~ 43 (236)
T 3edp_A 11 FEVIASKIKDSINRDEYKTGMLMPNETALQEIY 43 (236)
T ss_dssp HHHHHHHHHHHHHTTSSCCCC--CCHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCcCCCcCHHHHHHHH
Confidence 35789999999999899887 689999999874
No 56
>1qsd_A Protein (beta-tubulin binding post-chaperonin cofactor); four-helix-bundle, chaperone; 2.20A {Saccharomyces cerevisiae} SCOP: a.7.5.1
Probab=23.01 E-value=40 Score=28.47 Aligned_cols=65 Identities=17% Similarity=0.205 Sum_probs=49.0
Q ss_pred cchhhhHHHHHhhhh---HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccccccccch--HHHHHHHHh
Q 013544 281 ENQLEIDHLKFMLHQ---KEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKD--EELIAAEES 345 (441)
Q Consensus 281 ~n~~e~~~l~~m~~q---~ele~~r~k~q~e~~K~~lsvlq~K~~~~i~~A~~Ll~eKd--~~LdaAe~a 345 (441)
|=+-+-+++..|-.. ++-++.+..+-+.+++.++--++.|...++.+-+.+|.... .++.+|++.
T Consensus 26 E~~~q~~riek~k~~~~~dey~iKkq~evl~Et~~mipd~~~Rl~~a~~~L~~~l~~~~~~ee~~~Ake~ 95 (106)
T 1qsd_A 26 ELKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKRLLPTLYEKIREFKEDLEQFLKTYQGTEDVSDARSA 95 (106)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 344556777788776 68899999999999999999999999999998888884222 244444443
No 57
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=22.41 E-value=70 Score=27.01 Aligned_cols=66 Identities=12% Similarity=0.248 Sum_probs=50.9
Q ss_pred cchhhhHHHHHhhhh--HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccccccc-----cchHHHHHHHHhc
Q 013544 281 ENQLEIDHLKFMLHQ--KEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLIS-----DKDEELIAAEESL 346 (441)
Q Consensus 281 ~n~~e~~~l~~m~~q--~ele~~r~k~q~e~~K~~lsvlq~K~~~~i~~A~~Ll~-----eKd~~LdaAe~aL 346 (441)
|=+-+-+++..|-.. ++-++.+..+-+.+++.++--++.|...++.+-+.+|. ....++.+|++.|
T Consensus 29 E~~~q~~riek~k~e~~Dey~iKkq~evl~Et~~mipd~~~Rl~~a~~~L~~~l~~e~~~~~~ee~~~Ake~l 101 (108)
T 1h7c_A 29 EAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVL 101 (108)
T ss_dssp HHHHHHHHHHHHHHHHCSCTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCGGGTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHH
Confidence 334455667777653 46788899999999999999999999999999998886 2235777887765
No 58
>3by6_A Predicted transcriptional regulator; structural genomics, PSI-2, MCSG, structure initiative, midwest center for structural genomic binding; 2.20A {Oenococcus oeni}
Probab=22.34 E-value=70 Score=26.62 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHHhcCCCCCC-CCChHHHHHhc
Q 013544 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAHG 92 (441)
Q Consensus 61 ~~~l~~d~~ef~s~~~lp~~~-vps~kel~~hg 92 (441)
-..++..|++-+-.-.||||. +||.+||+++=
T Consensus 13 ~~~i~~~l~~~I~~g~~~~G~~lPse~~La~~~ 45 (126)
T 3by6_A 13 YLQLVDRIKNEVATDVLSANDQLPSVRETALQE 45 (126)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCcCHHHHHHHH
Confidence 367899999999999999885 69999999873
No 59
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=22.24 E-value=24 Score=27.70 Aligned_cols=14 Identities=36% Similarity=0.847 Sum_probs=11.2
Q ss_pred ECCeeecCCCCCcc
Q 013544 415 VDGQWKVDPQRESV 428 (441)
Q Consensus 415 VDGeW~~DPd~PtV 428 (441)
|||+|.+||.-.+.
T Consensus 48 vdgeWsYD~ATkTF 61 (65)
T 1mhx_A 48 VDGEWTYDDAAKTF 61 (65)
T ss_dssp CCSEEEEETTTTEE
T ss_pred CccEEEecCceeEE
Confidence 68999999977653
No 60
>2wv0_A YVOA, HTH-type transcriptional repressor YVOA; DNA-binding, transcription regulation, transcriptional regulator, GNTR/HUTC family; 2.40A {Bacillus subtilis}
Probab=22.20 E-value=68 Score=29.38 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=28.1
Q ss_pred cHHHHHHHHHHHHhcCCCCC-CCCChHHHHHhchh
Q 013544 61 NEELYNDLREFLSTVGLSES-HVPSMKELSAHGRD 94 (441)
Q Consensus 61 ~~~l~~d~~ef~s~~~lp~~-~vps~kel~~hgr~ 94 (441)
-..+..+|++-+..-.+++| .+||.+||+++=.+
T Consensus 12 ~~~i~~~l~~~I~~g~~~~g~~lPse~~La~~~~v 46 (243)
T 2wv0_A 12 YYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGI 46 (243)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCBCCCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCCCcCCCcCHHHHHHHHCc
Confidence 35788999999999889887 68999999987433
No 61
>1v4r_A Transcriptional repressor; helix-turn-helix, winged-helix, gene regulation; NMR {Streptomyces} SCOP: a.4.5.6
Probab=21.03 E-value=70 Score=25.14 Aligned_cols=32 Identities=16% Similarity=0.341 Sum_probs=26.2
Q ss_pred cHHHHHHHHHHHHhcCCCCCC-CCChHHHHHhc
Q 013544 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAHG 92 (441)
Q Consensus 61 ~~~l~~d~~ef~s~~~lp~~~-vps~kel~~hg 92 (441)
-..++..|++.+-.-.|++|. +||.+||+++=
T Consensus 13 ~~~l~~~i~~~I~~~~l~~g~~lps~~eLa~~~ 45 (102)
T 1v4r_A 13 YADVATHFRTLIKSGELAPGDTLPSVADIRAQF 45 (102)
T ss_dssp HHHHHHHHHHHTTTTSCCTTSBCCCHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCCCCcCCCcCHHHHHHHH
Confidence 467899999999887887665 69999999863
No 62
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=20.93 E-value=54 Score=29.73 Aligned_cols=49 Identities=18% Similarity=0.270 Sum_probs=33.5
Q ss_pred ceEEEEeee--CCCccc--cccCCCCCCCccccccccCCCcEEEEEEcCCeeEEEEEEECCee
Q 013544 361 EIVEVAGSF--NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQW 419 (441)
Q Consensus 361 ksVeVaGSF--NnW~~~--IpM~kd~ss~~~~~~~tkesG~FsttL~LpPGrYEYKFIVDGeW 419 (441)
..|+|+|+- ++|... .+|... ....+.|.....|..|.+.|+|-++.-|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~----------~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVP----------ATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCC----------SSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeec----------cCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 469999984 688754 445432 1367889888899999777666555434
No 63
>3bwg_A Uncharacterized HTH-type transcriptional regulato; APC85486, YYDK, transcriptional regulator, structural genomi 2; 2.09A {Bacillus subtilis subsp} SCOP: a.4.5.6 d.190.1.2
Probab=20.58 E-value=69 Score=29.19 Aligned_cols=33 Identities=12% Similarity=0.335 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhcCCCCC-CCCChHHHHHhchh
Q 013544 62 EELYNDLREFLSTVGLSES-HVPSMKELSAHGRD 94 (441)
Q Consensus 62 ~~l~~d~~ef~s~~~lp~~-~vps~kel~~hgr~ 94 (441)
..+..+|++-+..-.++|| .+||.+||+++=.+
T Consensus 8 ~~i~~~l~~~I~~g~~~~g~~lPse~~La~~~~v 41 (239)
T 3bwg_A 8 QQIATEIETYIEEHQLQQGDKLPVLETLMAQFEV 41 (239)
T ss_dssp CHHHHHHHHHHHHTTCCTTCBCCCHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCcCHHHHHHHHCC
Confidence 4789999999999999987 69999999987443
No 64
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=20.51 E-value=66 Score=26.70 Aligned_cols=19 Identities=26% Similarity=0.555 Sum_probs=14.3
Q ss_pred EcCCeeEEEEEEECCeeec
Q 013544 403 WLYPGTYEIKFIVDGQWKV 421 (441)
Q Consensus 403 ~LpPGrYEYKFIVDGeW~~ 421 (441)
.++||+|..--+|||+|+-
T Consensus 27 ~~~PG~Y~vdI~vN~~~~~ 45 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNNGYMA 45 (125)
T ss_dssp SSCSEEEEEEEEETTEEEE
T ss_pred CcCCcEEEEEEEECCeEcc
Confidence 3578888888888887764
Done!