Your job contains 1 sequence.
>013545
MWKEIGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLL
SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV
TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG
AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP
PLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRA
TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ
DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCP
SRHISDGVDAGPMQDQDNWSD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013545
(441 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2029815 - symbol:ATCSA-1 "AT1G27840" species:3... 1635 4.1e-168 1
TAIR|locus:2035449 - symbol:AT1G19750 "AT1G19750" species... 1605 6.2e-165 1
UNIPROTKB|E1C100 - symbol:ERCC8 "Uncharacterized protein"... 435 2.3e-68 2
UNIPROTKB|E2RFS7 - symbol:ERCC8 "Uncharacterized protein"... 424 1.8e-66 2
MGI|MGI:1919241 - symbol:Ercc8 "excision repaiross-comple... 422 2.9e-66 2
UNIPROTKB|F1SKV7 - symbol:ERCC8 "Uncharacterized protein"... 421 4.8e-66 2
UNIPROTKB|Q5BIM8 - symbol:ERCC8 "DNA excision repair prot... 419 4.8e-66 2
RGD|1311570 - symbol:Ercc8 "excision repair cross-complem... 417 1.6e-65 2
UNIPROTKB|Q13216 - symbol:ERCC8 "DNA excision repair prot... 416 4.2e-65 2
UNIPROTKB|B3KPW7 - symbol:ERCC8 "DNA excision repair prot... 353 1.8e-58 2
DICTYBASE|DDB_G0276481 - symbol:ercc8 "DNA excision repai... 523 8.7e-53 2
POMBASE|SPBC577.09 - symbol:ckn1 "ERCC-8 DNA repair homol... 370 5.4e-51 2
UNIPROTKB|G4MSM7 - symbol:MGG_12329 "DNA excision repair ... 293 6.3e-36 3
CGD|CAL0004044 - symbol:orf19.268 species:5476 "Candida a... 283 5.7e-28 2
UNIPROTKB|Q5AEK0 - symbol:RAD28 "Putative uncharacterized... 283 5.7e-28 2
UNIPROTKB|A6ML05 - symbol:A6ML05 "DNA excision repair pro... 262 4.7e-26 2
UNIPROTKB|C9JNT2 - symbol:ERCC8 "DNA excision repair prot... 263 2.5e-22 1
ASPGD|ASPL0000032475 - symbol:AN5235 species:162425 "Emer... 250 9.5e-19 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 238 3.0e-17 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 234 8.0e-17 1
UNIPROTKB|B4JPT9 - symbol:GH13339 "Ribosome biogenesis pr... 204 5.8e-14 2
TAIR|locus:2092722 - symbol:LST8-1 "AT3G18140" species:37... 139 3.0e-13 2
UNIPROTKB|B4GT01 - symbol:GL26386 "Ribosome biogenesis pr... 197 3.0e-13 2
UNIPROTKB|Q29KQ0 - symbol:GA19813 "Ribosome biogenesis pr... 197 3.0e-13 2
UNIPROTKB|B4KKN1 - symbol:GI17814 "Ribosome biogenesis pr... 190 3.8e-13 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 206 5.7e-13 1
UNIPROTKB|B3N534 - symbol:GG10358 "Ribosome biogenesis pr... 194 1.7e-12 1
UNIPROTKB|B3MJV8 - symbol:GF14067 "Ribosome biogenesis pr... 194 3.7e-12 2
UNIPROTKB|B4P116 - symbol:GE13328 "Ribosome biogenesis pr... 191 3.7e-12 1
FB|FBgn0032298 - symbol:CG6724 species:7227 "Drosophila m... 189 6.2e-12 1
UNIPROTKB|B4LS78 - symbol:GJ17641 "Ribosome biogenesis pr... 188 8.1e-12 1
POMBASE|SPBC428.19c - symbol:utp15 "U3 snoRNP protein Utp... 148 8.8e-12 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 141 1.8e-11 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 141 1.8e-11 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 185 1.9e-11 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 186 2.1e-11 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 193 2.3e-11 1
UNIPROTKB|Q17BB0 - symbol:AAEL005041 "Ribosome biogenesis... 182 4.0e-11 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 156 4.7e-11 2
UNIPROTKB|B4MU54 - symbol:GK23981 "Ribosome biogenesis pr... 181 5.0e-11 1
UNIPROTKB|Q5BJ90 - symbol:wdr12 "Ribosome biogenesis prot... 181 5.0e-11 1
CGD|CAL0000293 - symbol:UTP13 species:5476 "Candida albic... 140 6.4e-11 2
UNIPROTKB|Q5AGB1 - symbol:CaO19.11744 "Putative uncharact... 140 6.4e-11 2
UNIPROTKB|B4HWV6 - symbol:GM11446 "Ribosome biogenesis pr... 180 6.5e-11 1
UNIPROTKB|B4Q9T6 - symbol:GD22226 "Ribosome biogenesis pr... 180 6.5e-11 1
TAIR|locus:2157762 - symbol:AT5G50230 "AT5G50230" species... 149 8.6e-11 3
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 140 1.1e-10 2
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 137 1.1e-10 2
SGD|S000002437 - symbol:RAD28 "Protein involved in DNA re... 172 1.3e-10 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 131 1.3e-10 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 178 1.5e-10 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 177 1.9e-10 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 154 2.5e-10 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 154 2.5e-10 1
UNIPROTKB|A8QB65 - symbol:Bm1_47965 "Ribosome biogenesis ... 171 7.0e-10 1
TAIR|locus:2089855 - symbol:AT3G21540 "AT3G21540" species... 118 7.1e-10 2
UNIPROTKB|Q0VC24 - symbol:WDR12 "Ribosome biogenesis prot... 170 8.6e-10 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 155 8.8e-10 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 133 8.8e-10 2
UNIPROTKB|Q7QJ33 - symbol:AGAP007244 "Ribosome biogenesis... 170 8.9e-10 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 171 8.9e-10 1
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 169 1.0e-09 2
DICTYBASE|DDB_G0286457 - symbol:strap "putative serine-th... 131 1.0e-09 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 132 1.1e-09 2
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 132 1.1e-09 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 132 1.1e-09 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 132 1.1e-09 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 132 1.1e-09 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 134 1.1e-09 2
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 173 1.2e-09 1
UNIPROTKB|E1BWK2 - symbol:FBXW11 "Uncharacterized protein... 137 1.4e-09 3
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 132 1.4e-09 2
UNIPROTKB|B0W517 - symbol:CPIJ001500 "Ribosome biogenesis... 170 1.5e-09 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 169 1.7e-09 1
UNIPROTKB|O94967 - symbol:WDR47 "WD repeat-containing pro... 165 1.7e-09 2
UNIPROTKB|F1P2Y8 - symbol:WDR12 "Uncharacterized protein"... 167 1.8e-09 1
MGI|MGI:2139593 - symbol:Wdr47 "WD repeat domain 47" spec... 165 1.8e-09 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 169 2.0e-09 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 169 2.0e-09 1
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 152 2.1e-09 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 132 2.3e-09 2
FB|FBgn0020618 - symbol:Rack1 "Receptor of activated prot... 116 2.3e-09 2
UNIPROTKB|F1SHE8 - symbol:WDR12 "Uncharacterized protein"... 166 2.4e-09 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 166 2.6e-09 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 165 3.0e-09 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 118 3.2e-09 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 111 3.2e-09 3
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 134 3.5e-09 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 114 4.0e-09 2
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 162 4.4e-09 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 171 4.5e-09 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 157 5.0e-09 2
ZFIN|ZDB-GENE-030131-371 - symbol:wdr12 "WD repeat domain... 163 5.2e-09 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 164 5.3e-09 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 164 5.3e-09 1
WB|WBGene00000773 - symbol:cpf-1 species:6239 "Caenorhabd... 126 5.3e-09 2
DICTYBASE|DDB_G0292834 - symbol:DDB_G0292834 "cyclin-like... 165 5.4e-09 1
TAIR|locus:2180952 - symbol:AT5G15550 "AT5G15550" species... 163 5.5e-09 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 154 5.6e-09 2
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 154 5.6e-09 2
WARNING: Descriptions of 630 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2029815 [details] [associations]
symbol:ATCSA-1 "AT1G27840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0010224
"response to UV-B" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010224 KO:K10570 GO:GO:0080008 OMA:TMLRGHY UniGene:At.51683
IPI:IPI00657564 RefSeq:NP_001031099.1 UniGene:At.17206
ProteinModelPortal:F4HUT3 SMR:F4HUT3 EnsemblPlants:AT1G27840.3
GeneID:839677 KEGG:ath:AT1G27840 PhylomeDB:F4HUT3 Uniprot:F4HUT3
Length = 451
Score = 1635 (580.6 bits), Expect = 4.1e-168, P = 4.1e-168
Identities = 313/451 (69%), Positives = 363/451 (80%)
Query: 1 MWKEIGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLL 60
MW+ I RE G+IR NSFANR KS R+ +LQLSN K+ VSPH+GS+NSLQVDLTE RYLL
Sbjct: 1 MWEAIKDRETGRIRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL 60
Query: 61 SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV 120
SGA+D S AV+DVQRATDYE G IAKH+ +F VDKQHE+GHKYAISSAIWYP+DTGLF+
Sbjct: 61 SGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFI 120
Query: 121 TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG 180
TGS+DHY+KVWDTN + V++FKMPGKVYRTAMS +A SH LIAAGTEDVQVRLCDIASG
Sbjct: 121 TGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASG 180
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240
A S TLSGHRDG+M+VEWSTSSEW+L TGGCDGAIRFWDIRRAGCFRVLDQSQ+QLG RP
Sbjct: 181 AFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQLGFRP 240
Query: 241 PLLKRKS----LSAGQNSSV----KPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPG 292
P+LKR + LS+ SS+ + + Q + V+ SS + + S ++R+HPG
Sbjct: 241 PILKRTAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSSSAKASVEKSRQKRIHPG 300
Query: 293 MLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSK 352
MLS+ DRATAHYGAVTGLK T DGMYLLSAGSDSRIRLWD+ESGRNTLVNFET R+QT+K
Sbjct: 301 MLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNK 360
Query: 353 PIQLATTQDPAVVFVPCMTAVK-AFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGN 411
IQL T+ DPA+VFVPCM VK AF +WSG+T L RGHYE VN CCF+S DQELYT G+
Sbjct: 361 GIQLDTSDDPALVFVPCMKTVKVAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGS 420
Query: 412 DRQILVWCPSRHISDG-VDAGPMQDQDNWSD 441
DRQILVW P + D V +D+DNWSD
Sbjct: 421 DRQILVWSPGGTVEDEMVQDEVAEDKDNWSD 451
>TAIR|locus:2035449 [details] [associations]
symbol:AT1G19750 "AT1G19750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K10570
GO:GO:0080008 IPI:IPI00537626 RefSeq:NP_173405.2 UniGene:At.51683
ProteinModelPortal:F4HQX6 SMR:F4HQX6 EnsemblPlants:AT1G19750.1
GeneID:838564 KEGG:ath:AT1G19750 OMA:NEHALAT ArrayExpress:F4HQX6
Uniprot:F4HQX6
Length = 450
Score = 1605 (570.0 bits), Expect = 6.2e-165, P = 6.2e-165
Identities = 303/450 (67%), Positives = 357/450 (79%)
Query: 1 MWKEIGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLL 60
MWK RE G+ R NSFANR KS R+ +LQLSN K+ VSPH+GS+NSLQVDLTE RYLL
Sbjct: 1 MWKAFKDRETGRFRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL 60
Query: 61 SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV 120
SGA+D S AV+DV+RATDYE G IAKH+ +F V KQHE+GHKYAISSAIWYP+DTG+F+
Sbjct: 61 SGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHENGHKYAISSAIWYPIDTGMFI 120
Query: 121 TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG 180
TGS+DHYVKVWDTN ++VV++FKMPGKVYRTAMS +A SH LIAAGT+DVQVRLCDIASG
Sbjct: 121 TGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIASG 180
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240
A S TLSGHRDG+M+VEWSTSSEW+L TGGCDGAIRFWDIRRAGCFRVLD SQ+QLG RP
Sbjct: 181 AFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDNSQTQLGVRP 240
Query: 241 PLLKRKSLSAGQNSSVKP--------RAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPG 292
P+LKR ++S+ S+ K + Q + V+ SS + + S ++R+HPG
Sbjct: 241 PILKRPAVSSKFFSAAKSSLGDQNWLKTLQSKHTGSQSVKGSSSEKPSVEKSRQKRIHPG 300
Query: 293 MLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSK 352
MLS+ DRATAHYG VTGLK T DGMYLLSAGS SRIRLWD+ESGRNTLVNFET R+QT +
Sbjct: 301 MLSTLDRATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDR 360
Query: 353 PIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND 412
IQL T+ DPA+VFVPCM VK F +WSG+T L RGHYE VN CCF+S DQELYT G D
Sbjct: 361 AIQLDTSDDPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGAD 420
Query: 413 RQILVWCPSRHISDGVDAGPM-QDQDNWSD 441
RQI+VW P + D + G + +D+DNWSD
Sbjct: 421 RQIIVWSPGGSVEDEMAQGEVAEDKDNWSD 450
>UNIPROTKB|E1C100 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AADN02045784
EMBL:AADN02045777 EMBL:AADN02045778 EMBL:AADN02045779
EMBL:AADN02045780 EMBL:AADN02045781 EMBL:AADN02045782
EMBL:AADN02045783 IPI:IPI00574117 RefSeq:XP_424742.1
UniGene:Gga.11058 ProteinModelPortal:E1C100
Ensembl:ENSGALT00000023755 GeneID:427153 KEGG:gga:427153
NextBio:20828454 Uniprot:E1C100
Length = 399
Score = 435 (158.2 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 83/232 (35%), Positives = 130/232 (56%)
Query: 5 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGAS 64
I R+AG P + R+ +L+L+ +++ H IN+L ++ E RY+LSG S
Sbjct: 5 ISARQAGLDDPLRLRRAESTRRVLSLELNKDRDVERIHGSGINTLDIEPVEGRYMLSGGS 64
Query: 65 DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124
D + +YD++ + + K ++ V + H HK+++ + WYP DTG+F + S+
Sbjct: 65 DGVIVLYDLENLS--RKPNYTCK--ALCSVGRSHPDAHKFSVETVQWYPHDTGMFTSSSF 120
Query: 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184
D +K+WDTN + F+ G VY MSP+A H LIA GT+ +V+LCD+ SG+ S
Sbjct: 121 DKTLKIWDTNTLQPADVFQFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSCSH 180
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQSQSQ 235
L GHR ++ V WS E++L T D ++ WD+RRA GC LDQ +
Sbjct: 181 ILQGHRQEVLAVSWSPRHEYVLATASADSKVKLWDVRRASGCLTTLDQHNGE 232
Score = 277 (102.6 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 57/146 (39%), Positives = 83/146 (56%)
Query: 295 SSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 354
SS+ TAH G V GL T DG++LL+ G+D R+RLW+ +G NTLVN+ V ++ K +
Sbjct: 237 SSEAVNTAHNGRVNGLCYTSDGLHLLTVGTDDRMRLWNSSTGENTLVNYGKVSNESRKGL 296
Query: 355 QLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND 412
+ + + P FVP + + + I+SG+ RGHY V+CC F QELY+G D
Sbjct: 297 KFSVSCGCSPEFAFVPYKSTIAVYTIFSGELITMLRGHYNTVDCCVFQPNFQELYSGSRD 356
Query: 413 RQILVWCPSRH--ISDGVDAGPMQDQ 436
IL W P+ + D V P++ Q
Sbjct: 357 CNILAWIPALREPVLDDVSEKPLRRQ 382
>UNIPROTKB|E2RFS7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AAEX03001458
RefSeq:XP_544353.1 ProteinModelPortal:E2RFS7
Ensembl:ENSCAFT00000011467 GeneID:487225 KEGG:cfa:487225
NextBio:20860845 Uniprot:E2RFS7
Length = 396
Score = 424 (154.3 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 83/228 (36%), Positives = 126/228 (55%)
Query: 5 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGAS 64
+ R+AG P + R+ L+L+ +++ H +N+L ++ E RY+LSG S
Sbjct: 5 LSARQAGLDHPLRLRRAESTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEARYMLSGGS 64
Query: 65 DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124
D + +YD++ ++ + K +V V + H HKY++ + WYP DTG+F + S+
Sbjct: 65 DGVIVLYDLENSSRQPY--YTCK--AVCSVGRNHPDVHKYSVETVQWYPHDTGMFTSSSF 120
Query: 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184
D +KVWDTN + F VY MSP+A H L+A GT +V+LCD+ SG+ S
Sbjct: 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH 180
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQ 231
L GHR I+ V WS E++L T D ++ WD+RRA GC LDQ
Sbjct: 181 ILQGHRQEILAVSWSPRCEYVLATASADSRVKLWDVRRASGCLITLDQ 228
Score = 270 (100.1 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 56/136 (41%), Positives = 78/136 (57%)
Query: 290 HPGMLSS--QDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 347
H G S + TAH G V GL T DG++LL+ G+D+R+RLW+ SG NTLVN+ V
Sbjct: 229 HNGKKSQAVESANTAHNGKVNGLCFTNDGLHLLTVGTDNRMRLWNSSSGENTLVNYGKVC 288
Query: 348 LQTSKPIQLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 405
+ K ++ + VFVP + + + I+SG+ +GHY+ V+CC F S QE
Sbjct: 289 NDSRKGLKFTVSYGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQE 348
Query: 406 LYTGGNDRQILVWCPS 421
LY+G D IL W PS
Sbjct: 349 LYSGSRDCNILAWVPS 364
>MGI|MGI:1919241 [details] [associations]
symbol:Ercc8 "excision repaiross-complementing rodent repair
deficiency, complementation group 8" species:10090 "Mus musculus"
[GO:0000109 "nucleotide-excision repair complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0009411 "response to UV" evidence=ISO;IMP]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0016363 "nuclear
matrix" evidence=ISO] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1919241 GO:GO:0009411
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 CTD:1161 GeneTree:ENSGT00390000009065
HOVERGEN:HBG005409 OMA:TMLRGHY OrthoDB:EOG4SN1NR EMBL:AJ427222
EMBL:AK010576 EMBL:AK157175 EMBL:BC037200 IPI:IPI00311474
RefSeq:NP_082318.2 UniGene:Mm.212208 ProteinModelPortal:Q8CFD5
SMR:Q8CFD5 STRING:Q8CFD5 PhosphoSite:Q8CFD5 PRIDE:Q8CFD5
Ensembl:ENSMUST00000054835 GeneID:71991 KEGG:mmu:71991
UCSC:uc007rux.1 InParanoid:Q8CFD5 NextBio:335154 Bgee:Q8CFD5
Genevestigator:Q8CFD5 GermOnline:ENSMUSG00000021694 Uniprot:Q8CFD5
Length = 397
Score = 422 (153.6 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
Identities = 84/228 (36%), Positives = 125/228 (54%)
Query: 5 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGAS 64
+ R++G P + R+ L+L+ +++ H +N+L ++ E RY+LSG S
Sbjct: 5 LSARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGS 64
Query: 65 DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124
D V +YD++ A+ H ++V V + H HKY++ + WYP DTG+F + S+
Sbjct: 65 DGVVVLYDLENASRQP---HYTC-KAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF 120
Query: 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184
D +KVWDTN + F VY MSP A H L+A GT +V+LCD+ SG+ S
Sbjct: 121 DKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSH 180
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQ 231
L GHR I+ V WS ++IL T D ++ WD+RRA GC LDQ
Sbjct: 181 ILQGHRQEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLTLDQ 228
Score = 270 (100.1 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
Identities = 60/155 (38%), Positives = 85/155 (54%)
Query: 290 HPGMLS--SQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 347
H G S ++ TAH G V GL T DG++LL+ G+D+R+RLW+ SG NTLVN+ V
Sbjct: 229 HNGKKSQAAESANTAHNGKVNGLCFTSDGLHLLTIGTDNRMRLWNSSSGDNTLVNYGKVC 288
Query: 348 LQTSKPIQLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 405
+ K +Q A + VFVP + + + + SG+ +GHY+ V+CC F QE
Sbjct: 289 NDSRKGLQFAVSCGCSSEFVFVPHGSTIAVYAVHSGERLAMLKGHYKSVDCCVFQPNFQE 348
Query: 406 LYTGGNDRQILVWCPSRH--ISDGVDAGPMQDQDN 438
LY+G D IL W P + + D D P + Q N
Sbjct: 349 LYSGSRDCNILAWVPPSYEPVPDDDDEAPAKSQLN 383
>UNIPROTKB|F1SKV7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:CU570846
EMBL:FP067346 RefSeq:XP_003134037.3 Ensembl:ENSSSCT00000018442
GeneID:100524405 KEGG:ssc:100524405 Uniprot:F1SKV7
Length = 396
Score = 421 (153.3 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 85/228 (37%), Positives = 126/228 (55%)
Query: 5 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGAS 64
+ R+AG P + R+ L+L+ +++ H +N+L ++ E RY+LSG S
Sbjct: 5 LSARQAGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGS 64
Query: 65 DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124
D + +YD++ A+ + K +V V + H HKY++ + WYP DTG+F + S+
Sbjct: 65 DGVIVLYDLENASRQPY--YTCK--AVCSVGRNHPDVHKYSVETVQWYPHDTGMFTSSSF 120
Query: 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184
D +KVWDTN + F VY MSP+A H L+A GT+ +V+LCD+ SG+ S
Sbjct: 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVATKHCLVAVGTKGPKVQLCDLKSGSCSH 180
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQ 231
L GHR I+ V WS E+IL T D + WD+RRA GC LDQ
Sbjct: 181 ILQGHRQEILAVSWSPRYEYILATASADSKAKLWDVRRASGCLITLDQ 228
Score = 269 (99.8 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 56/140 (40%), Positives = 81/140 (57%)
Query: 290 HPGMLSS--QDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 347
H G S + TAH G V GL T DG++LL+ G+D+R+RLW+ +G NTLVN+ V
Sbjct: 229 HNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVH 288
Query: 348 LQTSKPIQLATTQDPAV--VFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 405
+ K ++ + + VFVP + + + I+SG+ +GHY+ V+CC F S QE
Sbjct: 289 NDSRKGLKFTVSCGCSTEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQE 348
Query: 406 LYTGGNDRQILVWCPSRHIS 425
LY+G D IL W PS + S
Sbjct: 349 LYSGSRDCNILAWVPSLYES 368
Score = 55 (24.4 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 390 HYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHISDGVDAGPMQD 435
H VN CF+S L T G D ++ +W S + V+ G + +
Sbjct: 244 HNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVHN 289
>UNIPROTKB|Q5BIM8 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9913 "Bos taurus" [GO:0009411 "response to UV"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISS] [GO:0032403
"protein complex binding" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=ISS] [GO:0006289 "nucleotide-excision
repair" evidence=ISS] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0043234
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 EMBL:BT021196 IPI:IPI00699947 RefSeq:NP_001103651.1
UniGene:Bt.33395 ProteinModelPortal:Q5BIM8 STRING:Q5BIM8
Ensembl:ENSBTAT00000028792 GeneID:518857 KEGG:bta:518857 CTD:1161
GeneTree:ENSGT00390000009065 HOVERGEN:HBG005409 OMA:TMLRGHY
NextBio:20872751 Uniprot:Q5BIM8
Length = 397
Score = 419 (152.6 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 84/228 (36%), Positives = 126/228 (55%)
Query: 5 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGAS 64
+ R+AG P + R+ L+L+ +++ H +N+L ++ E RY+LSG S
Sbjct: 5 LSARQAGLEDPLRLRRAESTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYMLSGGS 64
Query: 65 DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124
D + +YD++ ++ + K +V V + H HKY++ + WYP DTG+F + S+
Sbjct: 65 DGVIVLYDLENSSRQPY--YTCK--AVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF 120
Query: 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184
D +KVWDTN ++ F VY MSP+A H L+A GT +V+LCD+ SG+ S
Sbjct: 121 DKTLKVWDTNTLQIADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH 180
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQ 231
L GHR I+ V WS E+IL T D + WD+RRA GC LDQ
Sbjct: 181 ILQGHRQEILAVSWSPRYEYILATASADSRAKLWDVRRASGCLITLDQ 228
Score = 271 (100.5 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 59/155 (38%), Positives = 85/155 (54%)
Query: 290 HPGMLS--SQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 347
H G S ++ TAH G V GL T DG++LL+ G+D+R+RLW+ +G NTLVN+ V
Sbjct: 229 HNGKKSQAAESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVY 288
Query: 348 LQTSKPIQLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 405
+ K ++ + VFVP + + + I+SG+ +GHY+ V+CC F S QE
Sbjct: 289 NDSRKGLKFTVSSGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQE 348
Query: 406 LYTGGNDRQILVWCPS--RHISDGVDAGPMQDQDN 438
LY+G D IL W PS + D D + Q N
Sbjct: 349 LYSGSRDCNILAWVPSLCESVPDDDDETSTRSQLN 383
>RGD|1311570 [details] [associations]
symbol:Ercc8 "excision repair cross-complementing rodent repair
deficiency, complementation group 8" species:10116 "Rattus
norvegicus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0009411 "response
to UV" evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311570 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K10570
EMBL:CH473955 CTD:1161 GeneTree:ENSGT00390000009065 OMA:TMLRGHY
RefSeq:NP_001101120.2 UniGene:Rn.107979 ProteinModelPortal:G3V7B8
Ensembl:ENSRNOT00000013598 GeneID:310071 KEGG:rno:310071
Uniprot:G3V7B8
Length = 397
Score = 417 (151.9 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 83/228 (36%), Positives = 125/228 (54%)
Query: 5 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGAS 64
+ R++G P + R+ L+L+ +++ H +N+L ++ E RY+LSG S
Sbjct: 5 LSARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERVHCSGVNTLDIEPVEGRYMLSGGS 64
Query: 65 DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124
D + +YD++ A+ + K +V V + H HKY++ + WYP DTG+F + S+
Sbjct: 65 DGVIVLYDLENASRQPY--YTCK--AVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF 120
Query: 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184
D +KVWDTN + F VY MSP A H L+A GT +V+LCD+ SG+ S
Sbjct: 121 DKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSH 180
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQ 231
L GHR I+ V WS ++IL T D ++ WD+RRA GC LDQ
Sbjct: 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLLTLDQ 228
Score = 268 (99.4 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 57/155 (36%), Positives = 86/155 (55%)
Query: 290 HPGMLSS--QDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 347
H G S + TAH G V GL T DG++LL+ G+D+R+RLW+ SG NTLVN+ V
Sbjct: 229 HNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSSGDNTLVNYGKVC 288
Query: 348 LQTSKPIQLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 405
+ K ++ + + VFVP + + + ++SG+ +GHY+ V+CC F QE
Sbjct: 289 NSSRKGLKFTVSHGCNSEFVFVPYDSTIAMYAVYSGERLAMLKGHYKSVDCCVFQPNFQE 348
Query: 406 LYTGGNDRQILVWCPSRH--ISDGVDAGPMQDQDN 438
LY+G D IL W P+ + + D D P + + N
Sbjct: 349 LYSGSRDCNILAWVPASYEPVPDDDDEAPTKSRLN 383
>UNIPROTKB|Q13216 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IMP;TAS] [GO:0006979 "response to oxidative stress"
evidence=IDA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009411 "response to UV"
evidence=IMP;IDA] [GO:0045739 "positive regulation of DNA repair"
evidence=IMP] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;IMP;TAS] [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000109 "nucleotide-excision
repair complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0005654
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471123 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464 PDB:4A11
PDBsum:4A11 GO:GO:0000109 Orphanet:90321 Orphanet:90322
Orphanet:90324 Orphanet:178338 CTD:1161 HOVERGEN:HBG005409
OMA:TMLRGHY EMBL:U28413 EMBL:CR536563 EMBL:BT020021 EMBL:AY213194
EMBL:AK314511 EMBL:BC009793 IPI:IPI00012284 IPI:IPI00386696
PIR:A57090 RefSeq:NP_000073.1 UniGene:Hs.435237
ProteinModelPortal:Q13216 SMR:Q13216 DIP:DIP-291N IntAct:Q13216
MINT:MINT-1417899 STRING:Q13216 PhosphoSite:Q13216 DMDM:3121917
PRIDE:Q13216 DNASU:1161 Ensembl:ENST00000265038 GeneID:1161
KEGG:hsa:1161 UCSC:uc003jsl.3 UCSC:uc003jsn.3 GeneCards:GC05M060169
H-InvDB:HIX0004887 HGNC:HGNC:3439 MIM:216400 MIM:609412 MIM:614621
neXtProt:NX_Q13216 PharmGKB:PA27853 InParanoid:Q13216
OrthoDB:EOG4SN1NR PhylomeDB:Q13216 GenomeRNAi:1161 NextBio:4822
ArrayExpress:Q13216 Bgee:Q13216 CleanEx:HS_ERCC8
Genevestigator:Q13216 GermOnline:ENSG00000049167 Uniprot:Q13216
Length = 396
Score = 416 (151.5 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 81/228 (35%), Positives = 126/228 (55%)
Query: 5 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGAS 64
+ R+ G P + R+ L+L+ +++ H G IN+L ++ E RY+LSG S
Sbjct: 5 LSARQTGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGS 64
Query: 65 DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124
D + +YD++ ++ + K +V + + H H+Y++ + WYP DTG+F + S+
Sbjct: 65 DGVIVLYDLENSS--RQSYYTCK--AVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120
Query: 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184
D +KVWDTN + F VY MSP++ H L+A GT +V+LCD+ SG+ S
Sbjct: 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH 180
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQ 231
L GHR I+ V WS ++IL T D ++ WD+RRA GC LDQ
Sbjct: 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQ 228
Score = 265 (98.3 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 54/136 (39%), Positives = 78/136 (57%)
Query: 290 HPGMLSS--QDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 347
H G S + TAH G V GL T DG++LL+ G+D+R+RLW+ +G NTLVN+ V
Sbjct: 229 HNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVC 288
Query: 348 LQTSKPIQLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 405
+ K ++ + VFVP + + + ++SG+ +GHY+ V+CC F S QE
Sbjct: 289 NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE 348
Query: 406 LYTGGNDRQILVWCPS 421
LY+G D IL W PS
Sbjct: 349 LYSGSRDCNILAWVPS 364
>UNIPROTKB|B3KPW7 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010165
HOVERGEN:HBG005409 UniGene:Hs.435237 HGNC:HGNC:3439 EMBL:AC022445
EMBL:AC104113 EMBL:AK056931 IPI:IPI01015409 SMR:B3KPW7
STRING:B3KPW7 Ensembl:ENST00000426742 Uniprot:B3KPW7
Length = 338
Score = 353 (129.3 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 67/174 (38%), Positives = 100/174 (57%)
Query: 59 LLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118
+LSG SD + +YD++ ++ + K +V + + H H+Y++ + WYP DTG+
Sbjct: 1 MLSGGSDGVIVLYDLENSS--RQSYYTCK--AVCSIGRDHPDVHRYSVETVQWYPHDTGM 56
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA 178
F + S+D +KVWDTN + F VY MSP++ H L+A GT +V+LCD+
Sbjct: 57 FTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 116
Query: 179 SGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQ 231
SG+ S L GHR I+ V WS ++IL T D ++ WD+RRA GC LDQ
Sbjct: 117 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQ 170
Score = 265 (98.3 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 54/136 (39%), Positives = 78/136 (57%)
Query: 290 HPGMLSS--QDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 347
H G S + TAH G V GL T DG++LL+ G+D+R+RLW+ +G NTLVN+ V
Sbjct: 171 HNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVC 230
Query: 348 LQTSKPIQLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 405
+ K ++ + VFVP + + + ++SG+ +GHY+ V+CC F S QE
Sbjct: 231 NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE 290
Query: 406 LYTGGNDRQILVWCPS 421
LY+G D IL W PS
Sbjct: 291 LYSGSRDCNILAWVPS 306
>DICTYBASE|DDB_G0276481 [details] [associations]
symbol:ercc8 "DNA excision repair protein 8"
species:44689 "Dictyostelium discoideum" [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISS]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276481 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000015 GO:GO:0006283 KO:K10570
eggNOG:NOG271357 RefSeq:XP_643081.1 ProteinModelPortal:Q551N8
STRING:Q551N8 EnsemblProtists:DDB0232366 GeneID:8620485
KEGG:ddi:DDB_G0276481 InParanoid:Q551N8 OMA:HVYETAT
ProtClustDB:CLSZ2494971 Uniprot:Q551N8
Length = 513
Score = 523 (189.2 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 130/429 (30%), Positives = 211/429 (49%)
Query: 30 LQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV-QRATDYEGGGHI-AK 87
L LS YK+I++ +KG IN L +D+ E RYLLS + D + +YD+ + + + I +
Sbjct: 30 LDLSVYKQIINYNKGPINHLDIDVAENRYLLSVSGDGIIQIYDLFENLLNNKKNNEIKTE 89
Query: 88 HRSVFVVDKQHEHGHKY-----------AISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT 136
+ + ++++ + + ISS WYP+DTG+F G + V+VWDTN
Sbjct: 90 FQPILKINRKSNNNNNNNNSNSEGILLKGISSVQWYPIDTGIFFIGGVNGNVEVWDTNLG 149
Query: 137 RVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTV 196
+V F + V + S + +++LIAA T D +VRLCD+ + + L+GHR+ ++++
Sbjct: 150 QVSQTFYLENCVNSISYSQVNCTNLLIAAATTDPKVRLCDMRTNSSVHCLTGHRESVLSI 209
Query: 197 EWSTSSEWILVTGGCDGAIRFWDIRRAGCFR-VLDQSQSQ---------LGRRPPLLKRK 246
+WS S ++ T D IR WDIRR F LDQ G
Sbjct: 210 KWSPFSPNLIATASKDKTIRLWDIRRGDTFLFALDQYNGSGIGIGVGGGSGGESNDDVGN 269
Query: 247 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRL-----HPGMLSSQDRAT 301
+ G + +K ++ + Q+S I K ++ + ++ T
Sbjct: 270 DIGGGNKNDLKQSKRYRQKLHKPKSLQTSSSSIIEKRNIGGGGGGIGGSANLTLKKEVPT 329
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG-RNTLVNFETVRLQTSKPIQLATTQ 360
AH G +T + T DG YL+S G+DS+IRLWD++ G NT++N+ P Q+ +
Sbjct: 330 AHNGTITSIAWTPDGNYLVSTGADSKIRLWDIQKGGANTMINYPNAHNVHKIPNQICLST 389
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCP 420
+ +F P A+ ++ +G +GH+E VNCC F+ DQ L +G NDR L W
Sbjct: 390 NGQYLFHPNGRAIHVYETATGNLVRQLKGHFEKVNCCVFNHCDQALISGSNDRLTLYWDN 449
Query: 421 SRHISDGVD 429
S D +D
Sbjct: 450 SN--DDQID 456
Score = 41 (19.5 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 433 MQDQDNWSD 441
++D DNWSD
Sbjct: 504 LEDVDNWSD 512
>POMBASE|SPBC577.09 [details] [associations]
symbol:ckn1 "ERCC-8 DNA repair homolog" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0070912 "Ddb1-Ckn1
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC577.09 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006283
PIR:T40553 RefSeq:NP_595307.1 ProteinModelPortal:Q9USR0
STRING:Q9USR0 EnsemblFungi:SPBC577.09.1 GeneID:2540861
KEGG:spo:SPBC577.09 HOGENOM:HOG000248233 KO:K10570 OMA:KIWDTNE
OrthoDB:EOG4BS0W2 NextBio:20801977 GO:GO:0070912 Uniprot:Q9USR0
Length = 404
Score = 370 (135.3 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 82/229 (35%), Positives = 126/229 (55%)
Query: 8 REAGQIRPNS-FANRVKSHRLSTLQLSNYKEIVSPHK----GSINSLQVDLTEERYLLSG 62
RE GQ PNS F ++ HRL L L+ +I H GS+N+L +D T + ++SG
Sbjct: 8 REWGQ-EPNSSFRRQLLQHRLQRLALNPDVKIKRRHGAGILGSVNALSIDNTIHQLMVSG 66
Query: 63 ASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTG 122
++SS+ V+D+Q E I ++ V + H K+ I+ W+P D G+F +
Sbjct: 67 GANSSINVWDLQNIDQKEDEDLILD--TLNAVPARTSH--KFGITDLHWFPFDNGIFTSS 122
Query: 123 SYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI 182
S+DH +KVWD + + F M +Y A SP+A SH LIA +RLCD+ SG+
Sbjct: 123 SFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIA-SHCLIATAYRSSSIRLCDMQSGSY 181
Query: 183 SQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR-AGCFRVLD 230
+ +LSGH ++ V+W +E++L +G DG R WDIR+ + F +D
Sbjct: 182 THSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMD 230
Score = 177 (67.4 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 289 LHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNF-ETVR 347
LH L S +HYG V GL T D YL S G+D RIR+W++ESGRNTL F +
Sbjct: 231 LHNKYLPSNQTNISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIH 290
Query: 348 LQTSK----P--IQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGH-YEYVNCCCFS 400
QT+ P IQ + D V+F ++ ++ G H + +NC +
Sbjct: 291 NQTTSFAVHPCMIQPSMDSDVFVLFPNDDGSLALLNLLEGSFVRRLSTHSLKRINCAAYR 350
Query: 401 SQDQELYTGGNDRQILVWCP 420
++ +TG + I +W P
Sbjct: 351 PDFEQCFTGDMNGNIYMWSP 370
>UNIPROTKB|G4MSM7 [details] [associations]
symbol:MGG_12329 "DNA excision repair protein ERCC-8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K10570 RefSeq:XP_003715255.1 ProteinModelPortal:G4MSM7
EnsemblFungi:MGG_12329T0 GeneID:5050927 KEGG:mgr:MGG_12329
Uniprot:G4MSM7
Length = 521
Score = 293 (108.2 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 78/227 (34%), Positives = 120/227 (52%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQ------RATDYE--------GGGHIAK 87
H+ +N+L ++ + R L SG SD ++ +++++ +A Y GG A
Sbjct: 68 HQPGVNALALERFDGRLLASGGSDGTIRLWNLEQCANPHKAHTYRPLAQITRASGGR-AT 126
Query: 88 HRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK 147
R Q+ H++ ++ +YP D F + SYD +KVW T R+ +F + K
Sbjct: 127 SRPGAPTQAQNLQHHRFGVTHLSFYPFDANAFFSSSYDETLKVWATEGARLSGSFSLEAK 186
Query: 148 VYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL-SGHRDG-----IMTVEWSTS 201
VY A SP+A SH+LIA T++ VRL D+ SGA Q+L +G + G +++V WS
Sbjct: 187 VYSHAASPIA-SHLLIACATQNPAVRLVDLRSGAAVQSLMAGGQVGAGTGAVLSVAWSPV 245
Query: 202 SEWILVTGGCDGAIRFWDIRRAGCF-RVLDQSQSQLG---RRPPLLK 244
E IL +G DG +R WD+RR+ +LDQ S LG RRP L+
Sbjct: 246 HEHILASGSVDGTVRIWDVRRSSALVALLDQEDS-LGIIRRRPEQLR 291
Score = 139 (54.0 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 300 ATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNF-ETVR 347
A AH G V GL T+DG Y++SAG D +IR+W+ SG NTLVNF T+R
Sbjct: 309 ARAHAGPVNGLTWTDDGDYIISAGHDRKIRVWNAASGANTLVNFGPTIR 357
Score = 67 (28.6 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 30/109 (27%), Positives = 46/109 (42%)
Query: 157 AASHMLIAAGTEDVQVR--LCDIASGAISQTLS--GHRDGIMTVEWSTSSEWILVTGGCD 212
AA H G + V V AI Q S H+ G+ + +L +GG D
Sbjct: 32 AAPHHRFDGGEQGVAVYDGAAPRDGAAIDQRRSIWAHQPGVNALALERFDGRLLASGGSD 91
Query: 213 GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAP 261
G IR W++ + C + ++ R PL + S G+ +S +P AP
Sbjct: 92 GTIRLWNLEQ--C---ANPHKAHTYR--PLAQITRASGGRATS-RPGAP 132
Score = 44 (20.5 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 406 LYTGGNDRQILVWCPSRHISDGV-DAGPMQDQD 437
+Y+G +D I VW P D + + G + + D
Sbjct: 460 IYSGHSDGLIRVWMPELDGGDPIAEFGDVPEDD 492
Score = 42 (19.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 22/103 (21%), Positives = 37/103 (35%)
Query: 29 TLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKH 88
T++L N ++ +PHK +T R A+ A Q + G H
Sbjct: 93 TIRLWNLEQCANPHKAHTYRPLAQIT--RASGGRATSRPGAPTQAQNLQHHRFG---VTH 147
Query: 89 RSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVW 131
S + D Y + +W G ++GS+ KV+
Sbjct: 148 LSFYPFDANAFFSSSYDETLKVW--ATEGARLSGSFSLEAKVY 188
>CGD|CAL0004044 [details] [associations]
symbol:orf19.268 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0070912 "Ddb1-Ckn1 complex" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 283 (104.7 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 68/209 (32%), Positives = 114/209 (54%)
Query: 29 TLQLSNYKEIVSPHKGSINSLQVDLTEERYLLS-GASDSSVAVYDVQRAT-DYEGGGHIA 86
+L+ ++Y+ ++S S L DL ++ + D+++ ++ DY+ ++
Sbjct: 53 SLETTDYQYLLSGSNDSSIKLW-DLKQQEAIREENEIDANLHLHPTTFDNFDYDNP--VS 109
Query: 87 KHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
++ + K+H H HK+ IS W+P DTG+F + S+DH VK+WDTN V F +
Sbjct: 110 TFVNLATIPKRH-H-HKFGISCIQWWPYDTGMFASSSFDHTVKIWDTNELTPVHTFDLSN 167
Query: 147 KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWIL 206
KVY +S A + LIA + +RL D+ S + + TLSGH+ + V+W + IL
Sbjct: 168 KVYDIDIS---AENALIATANDQPFIRLLDLNSTSSAHTLSGHKGKTLVVKWHPINSNIL 224
Query: 207 VTGGCDGAIRFWDIRRA-GCFRVLDQSQS 234
+GG DG ++ WDIRR+ C LD S++
Sbjct: 225 ASGGYDGEVKIWDIRRSQSCLTQLDMSRT 253
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 1 MWKEIGGREAGQIRPNSFANRVKSHRLSTL-QLSNYKEIVSP---H-KGSINSLQVDLTE 55
M K + R G+I P+ F+N + + S + QL K V P H ++NSL ++ T+
Sbjct: 1 MEKLLLDRSLGRITPSRFSNIITENFYSEIYQLG--KHDVFPGNCHDNAAVNSLSLETTD 58
Query: 56 ERYLLSGASDSSVAVYDVQR 75
+YLLSG++DSS+ ++D+++
Sbjct: 59 YQYLLSGSNDSSIKLWDLKQ 78
Score = 83 (34.3 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 41/156 (26%), Positives = 63/156 (40%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR-----NTLVNF-ETVRLQTSKPIQ 355
AH G V+GL G L + G+D +IR+WD+ + N L+NF +R + I
Sbjct: 265 AHSGPVSGLVWDHSGSLLYTVGNDDKIRVWDMVNVSTPPPINKLINFGPLIRNKHPHTIP 324
Query: 356 L-----ATTQDPAVVFVPCMTAVKAFDIWSGKTC--LTFRGHYEY---VNCCCFSSQDQE 405
L T+ ++F V F GK L +G V+ C +
Sbjct: 325 LLLNPQGETETQFLLFPSESGDVFIFRTIDGKLVNRLARKGSRNTGRTVSMCNGGPSTAK 384
Query: 406 LYTGGNDRQILVWCPSRHISDGVDAGPMQDQDNWSD 441
+ G D +I+ W P D D ++ QD +D
Sbjct: 385 YFCGTIDGEIISWGPCL---DKPDLSELRQQDENND 417
Score = 59 (25.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ L T + ++++ D N T GK P+ ++ ++A+G D +V+
Sbjct: 177 ENALIATANDQPFIRLLDLNSTSSAHTLSGHKGKTLVVKWHPINSN--ILASGGYDGEVK 234
Query: 174 LCDI--ASGAISQT-LSGHRDGIMTVEWSTSSE-------W-----ILVTGGCDGAIRFW 218
+ DI + ++Q +S D T + S + W +L T G D IR W
Sbjct: 235 IWDIRRSQSCLTQLDMSRTNDSSYTTKLSKAHSGPVSGLVWDHSGSLLYTVGNDDKIRVW 294
Query: 219 DI 220
D+
Sbjct: 295 DM 296
>UNIPROTKB|Q5AEK0 [details] [associations]
symbol:RAD28 "Putative uncharacterized protein RAD28"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 283 (104.7 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 68/209 (32%), Positives = 114/209 (54%)
Query: 29 TLQLSNYKEIVSPHKGSINSLQVDLTEERYLLS-GASDSSVAVYDVQRAT-DYEGGGHIA 86
+L+ ++Y+ ++S S L DL ++ + D+++ ++ DY+ ++
Sbjct: 53 SLETTDYQYLLSGSNDSSIKLW-DLKQQEAIREENEIDANLHLHPTTFDNFDYDNP--VS 109
Query: 87 KHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
++ + K+H H HK+ IS W+P DTG+F + S+DH VK+WDTN V F +
Sbjct: 110 TFVNLATIPKRH-H-HKFGISCIQWWPYDTGMFASSSFDHTVKIWDTNELTPVHTFDLSN 167
Query: 147 KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWIL 206
KVY +S A + LIA + +RL D+ S + + TLSGH+ + V+W + IL
Sbjct: 168 KVYDIDIS---AENALIATANDQPFIRLLDLNSTSSAHTLSGHKGKTLVVKWHPINSNIL 224
Query: 207 VTGGCDGAIRFWDIRRA-GCFRVLDQSQS 234
+GG DG ++ WDIRR+ C LD S++
Sbjct: 225 ASGGYDGEVKIWDIRRSQSCLTQLDMSRT 253
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 1 MWKEIGGREAGQIRPNSFANRVKSHRLSTL-QLSNYKEIVSP---H-KGSINSLQVDLTE 55
M K + R G+I P+ F+N + + S + QL K V P H ++NSL ++ T+
Sbjct: 1 MEKLLLDRSLGRITPSRFSNIITENFYSEIYQLG--KHDVFPGNCHDNAAVNSLSLETTD 58
Query: 56 ERYLLSGASDSSVAVYDVQR 75
+YLLSG++DSS+ ++D+++
Sbjct: 59 YQYLLSGSNDSSIKLWDLKQ 78
Score = 83 (34.3 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 41/156 (26%), Positives = 63/156 (40%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR-----NTLVNF-ETVRLQTSKPIQ 355
AH G V+GL G L + G+D +IR+WD+ + N L+NF +R + I
Sbjct: 265 AHSGPVSGLVWDHSGSLLYTVGNDDKIRVWDMVNVSTPPPINKLINFGPLIRNKHPHTIP 324
Query: 356 L-----ATTQDPAVVFVPCMTAVKAFDIWSGKTC--LTFRGHYEY---VNCCCFSSQDQE 405
L T+ ++F V F GK L +G V+ C +
Sbjct: 325 LLLNPQGETETQFLLFPSESGDVFIFRTIDGKLVNRLARKGSRNTGRTVSMCNGGPSTAK 384
Query: 406 LYTGGNDRQILVWCPSRHISDGVDAGPMQDQDNWSD 441
+ G D +I+ W P D D ++ QD +D
Sbjct: 385 YFCGTIDGEIISWGPCL---DKPDLSELRQQDENND 417
Score = 59 (25.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ L T + ++++ D N T GK P+ ++ ++A+G D +V+
Sbjct: 177 ENALIATANDQPFIRLLDLNSTSSAHTLSGHKGKTLVVKWHPINSN--ILASGGYDGEVK 234
Query: 174 LCDI--ASGAISQT-LSGHRDGIMTVEWSTSSE-------W-----ILVTGGCDGAIRFW 218
+ DI + ++Q +S D T + S + W +L T G D IR W
Sbjct: 235 IWDIRRSQSCLTQLDMSRTNDSSYTTKLSKAHSGPVSGLVWDHSGSLLYTVGNDDKIRVW 294
Query: 219 DI 220
D+
Sbjct: 295 DM 296
>UNIPROTKB|A6ML05 [details] [associations]
symbol:A6ML05 "DNA excision repair protein ERCC 8-like
protein" species:9483 "Callithrix jacchus" [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0006979
"response to oxidative stress" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 GO:GO:0006979 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403
GO:GO:0000209 GO:GO:0045739 GO:GO:0051865 GO:GO:0006283
HOGENOM:HOG000248233 HOVERGEN:HBG005409 OrthoDB:EOG4SN1NR
EMBL:EF215253 Uniprot:A6ML05
Length = 184
Score = 262 (97.3 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 52/123 (42%), Positives = 74/123 (60%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ 360
TAH G V GL T DG++LL+ G+D+R+RLW+ +G NTLVN+ V + K ++ +
Sbjct: 31 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSFNGENTLVNYGKVCNNSKKGLKFTVSC 90
Query: 361 --DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
VFVP + V + ++SG+ +GHY+ V+CC F S QELY+G D IL W
Sbjct: 91 GCSSEFVFVPYGSTVAVYTVYSGEQITMLKGHYKSVDCCVFQSHFQELYSGSRDCNILAW 150
Query: 419 CPS 421
PS
Sbjct: 151 VPS 153
Score = 55 (24.4 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 216 RFWDIRRA-GCFRVLDQSQSQ 235
+ WD+RRA GC LDQ +
Sbjct: 1 KLWDVRRASGCLITLDQHNGE 21
>UNIPROTKB|C9JNT2 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 Gene3D:2.130.10.10 GO:GO:0010165 HGNC:HGNC:3439
EMBL:AC022445 EMBL:AC104113 IPI:IPI01015409
ProteinModelPortal:C9JNT2 SMR:C9JNT2 STRING:C9JNT2
Ensembl:ENST00000439176 HOGENOM:HOG000185885 ArrayExpress:C9JNT2
Bgee:C9JNT2 Uniprot:C9JNT2
Length = 134
Score = 263 (97.6 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 51/138 (36%), Positives = 79/138 (57%)
Query: 59 LLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118
+LSG SD + +YD++ ++ + K +V + + H H+Y++ + WYP DTG+
Sbjct: 1 MLSGGSDGVIVLYDLENSS--RQSYYTCK--AVCSIGRDHPDVHRYSVETVQWYPHDTGM 56
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA 178
F + S+D +KVWDTN + F VY MSP++ H L+A GT +V+LCD+
Sbjct: 57 FTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 116
Query: 179 SGAISQTLSGHRDGIMTV 196
SG+ S L GHR I+ V
Sbjct: 117 SGSCSHILQGHRQEILAV 134
>ASPGD|ASPL0000032475 [details] [associations]
symbol:AN5235 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0070912 "Ddb1-Ckn1 complex" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001305 EMBL:AACD01000089
KO:K10570 OrthoDB:EOG4BS0W2 RefSeq:XP_662839.1
ProteinModelPortal:Q5B2J5 EnsemblFungi:CADANIAT00003235
GeneID:2871522 KEGG:ani:AN5235.2 HOGENOM:HOG000190060 OMA:HTHAITS
Uniprot:Q5B2J5
Length = 469
Score = 250 (93.1 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 81/290 (27%), Positives = 135/290 (46%)
Query: 28 STLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIA- 86
S ++ S+ EI + HK N L +D + R+++SG +D S+ ++D++ G ++
Sbjct: 42 SEIRESSADEIYA-HKAGANVLAIDQYDGRFMVSGGADPSIHLWDLEAR-----GSELSY 95
Query: 87 KHRSVFVVDK-QHEHGHKYAISSAIWYPVDT--GLFVTGSYDHYVKVWDTNCTRV--VMN 141
HR V K H+ H +AI+S YP D +T S+D +K+ + V
Sbjct: 96 THRPAASVTKFSHDDAHTHAITSVSIYPFDPTPSTIITTSHDGTLKLSALQPPTITPVHT 155
Query: 142 FKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTS 201
FK+ Y ++S +S +L+A GT + VRL D+ SG + L GH +++V W+
Sbjct: 156 FKLDCTPYAHSLSAHPSSPLLVAVGTSEKPVRLLDLRSGLSTHGLPGHSSAVLSVSWAPH 215
Query: 202 SEWILVTGGCDGAIRFWDIRRAG---CFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKP 258
IL + D + +DIRRAG LD + +G PP R + S ++ +P
Sbjct: 216 RPHILASASTDNRVILFDIRRAGHNSAIATLDMDDA-VGLVPP---RSTPSLYRS---RP 268
Query: 259 R-APQKRSANG--NGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYG 305
+P R+ NG GVR + G R+ ++ H+G
Sbjct: 269 AFSPHARAHNGPVTGVRWTPDGSYLVTAGQDARIRVWQAATGANTLVHFG 318
Score = 155 (59.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 40/115 (34%), Positives = 62/115 (53%)
Query: 275 SVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
+VG +P + + L+ + A AH G VTG++ T DG YL++AG D+RIR+W
Sbjct: 251 AVGLVPPRST--PSLYRSRPAFSPHARAHNGPVTGVRWTPDGSYLVTAGQDARIRVWQAA 308
Query: 335 SGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRG 389
+G NTLV+F R+Q + + LA + P +V M A +W+ + RG
Sbjct: 309 TGANTLVHFGP-RVQNTSSLHLAE-RAPLIVPHGQMGAGHEIFLWANFSDSDHRG 361
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 238 (88.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 83/341 (24%), Positives = 150/341 (43%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMS--PL-- 156
GH + W P D + TGS D+ +++WD + + + + T++S P+
Sbjct: 184 GHYNWVLCVSWSP-DGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHL 242
Query: 157 --AASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
S +A+ ++D +++ D S T+SGH + + V+W + +L +G D
Sbjct: 243 VKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG--GQGLLYSGSHDRT 300
Query: 215 IRFWDIRRAG-CFRVLDQSQSQLGRRPPLLKRKSLSAG--QNSSVKPRAP---QKRSANG 268
+R WDI G C +L +S + L +L G ++ KP P QK++
Sbjct: 301 VRVWDINSQGRCINIL-KSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALEN 359
Query: 269 -------NGVRQSSVGRIPAKGSVRQRLHPGMLSSQD--RATAHYGAVTGLKVTEDGMYL 319
NG + + + A L + S++ R T H V + + DG Y+
Sbjct: 360 YEKICKKNGNSEEMM--VTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYI 417
Query: 320 LSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM--TAVKAFD 377
+SA D+ I+LWD G+ T R + Q+A + D ++ V C T +K +D
Sbjct: 418 VSASFDNSIKLWDGRDGKF----ISTFRGHVASVYQVAWSSDCRLL-VSCSKDTTLKVWD 472
Query: 378 IWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ + K + GH + V +S + + +GG D+ + +W
Sbjct: 473 VRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 234 (87.4 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 93/393 (23%), Positives = 163/393 (41%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H G+I S Q + L++G+ D + ++D T IA + G
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTP------IATMK-----------G 175
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMN-FKMPGK-VYRTAMSPLA-- 157
H +S W P D + TGS D+ ++ WD + + + K + PL
Sbjct: 176 HTNWVSCVAWAP-DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLA 234
Query: 158 --ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215
+ L+A+G++D VR+ ++ + TLSGH I V W WI + D I
Sbjct: 235 PDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIY-SSSYDKTI 292
Query: 216 RFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAG--QNSSVKPRA--PQKRSANGNG- 270
R WD + C +L +++ L L +G ++ KP++ ++R A
Sbjct: 293 RIWDAKDGKCLHILKGHAARVNHLS-LSTEHVLRSGAYDHTDFKPKSFSDERRKAKERYE 351
Query: 271 --VRQSSVGRIPAKGSVRQRLHPGMLSSQD--RATAHYGAVTGLKVTEDGMYLLSAGSDS 326
++QS + A ++ L S++ + H V + DG + +A DS
Sbjct: 352 ACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDS 411
Query: 327 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCL 385
+RLWD ++G+ T+R + Q A + D ++ T +K +D+ S K
Sbjct: 412 SVRLWDGKTGKF----LATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKF 467
Query: 386 TFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
GH + V +S Q + +GG D+ + +W
Sbjct: 468 DLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 120 (47.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 35/129 (27%), Positives = 55/129 (42%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
+GH I SA + P + VTGS D ++WD + + K G + A
Sbjct: 131 NGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMK--GHTNWVSCVAWAPD 188
Query: 160 HMLIAAGTEDVQVRLCDIASGA-ISQTLSGHRDGIMTVEWST------SSEWILVTGGCD 212
+IA G+ D +R D G+ I L H IM + W S ++L +G D
Sbjct: 189 ASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKD 248
Query: 213 GAIRFWDIR 221
+R W+++
Sbjct: 249 NTVRIWNVK 257
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 398 CFSSQDQELYTGGNDRQILVWCPSR 422
C + L + +D Q+++W P +
Sbjct: 353 CLKQSGERLVSASDDLQLILWDPQK 377
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 204 (76.9 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 60/212 (28%), Positives = 98/212 (46%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN + VS KG S++S+ V +R+ +G+ D+ + ++ + EG AK
Sbjct: 180 SNAVDCVSVCKGHERSVDSVAVSPDAQRFA-TGSWDTMLKLWSAELEDAVEGSAKRAKES 238
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ +IS+ W +D +TGS+DH +KVWD N + ++
Sbjct: 239 GVRT-PKMTLQGHRESISAVQW--MDGTTLLTGSWDHTLKVWDLNLEGIKTEISTNKSIF 295
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
S L + LI + D +RL D + + T GH + TV WST+ E++
Sbjct: 296 DANFSKL---NRLIVTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 352
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 353 VSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVL 384
Score = 43 (20.2 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 9/28 (32%), Positives = 20/28 (71%)
Query: 318 YLLSAGSDSRIRLWDVESGRNTLVNFET 345
Y++S G+D+ +R++ +S + T+ + ET
Sbjct: 393 YIVSGGADNTVRVF--KSRKATVDHMET 418
>TAIR|locus:2092722 [details] [associations]
symbol:LST8-1 "AT3G18140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005768 "endosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048571
"long-day photoperiodism" evidence=IMP] [GO:1900088 "regulation of
inositol biosynthetic process" evidence=IMP] [GO:1900091
"regulation of raffinose biosynthetic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005768 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB020749 HSSP:P16649 GO:GO:0048571 OMA:NNKGNCY
EMBL:AY087463 EMBL:BT002312 IPI:IPI00542303 RefSeq:NP_188442.1
UniGene:At.6055 ProteinModelPortal:Q9LV27 SMR:Q9LV27 IntAct:Q9LV27
STRING:Q9LV27 PRIDE:Q9LV27 EnsemblPlants:AT3G18140.1 GeneID:821339
KEGG:ath:AT3G18140 TAIR:At3g18140 InParanoid:Q9LV27
PhylomeDB:Q9LV27 ProtClustDB:CLSN2683726 Genevestigator:Q9LV27
GO:GO:1900088 GO:GO:1900091 Uniprot:Q9LV27
Length = 305
Score = 139 (54.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 32/111 (28%), Positives = 52/111 (46%)
Query: 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTEDVQVRLCD 176
+ T SYDH ++ W+ R + P V R ++P H L AA +RL D
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITP--DKHYLAAACNP--HIRLFD 62
Query: 177 IASGAIS--QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGC 225
+ S + T H + +M V + ++W + +G DG ++ WD+R GC
Sbjct: 63 VNSNSPQPVMTYDSHTNNVMAVGFQCDAKW-MYSGSEDGTVKIWDLRAPGC 112
Score = 103 (41.3 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 32/117 (27%), Positives = 51/117 (43%)
Query: 306 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETV-RLQTSKPIQLATTQDPAV 364
AV L V DG +++A + +W + G+ T+ FE + +LQ L PA
Sbjct: 164 AVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPAN 223
Query: 365 VFVPCMTAVKAFDIWS--G-KTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
++ ++ K IW+ G K GH +V C FS + L T +D +W
Sbjct: 224 KYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLW 280
Score = 71 (30.1 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 22/96 (22%), Positives = 43/96 (44%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD 361
AH G + ++ YL +A SD +++W+V+ + L T + + +
Sbjct: 209 AHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFK--LEKVLTGHQRWVWDCVFSVDGE 266
Query: 362 PAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCC 397
V MTA + + + +GK ++GH++ CC
Sbjct: 267 FLVTASSDMTA-RLWSMPAGKEVKVYQGHHKATVCC 301
Score = 64 (27.6 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLV 341
T H V + DG +L++A SD RLW + +G+ V
Sbjct: 250 TGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKV 290
Score = 58 (25.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 165 AGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
+G+ED V++ D+ + + V +E L++G +G IR WD+R
Sbjct: 95 SGSEDGTVKIWDLRAPGCQKEYESVAAVNTVVLHPNQTE--LISGDQNGNIRVWDLRANS 152
Query: 225 C 225
C
Sbjct: 153 C 153
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 197 (74.4 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 58/212 (27%), Positives = 99/212 (46%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
+N E VS KG ++S+ V +R+ +G+ D+ + V+ + EG K
Sbjct: 180 ANTVECVSVCKGHERGVDSVSVSPDGQRFA-TGSWDTMLKVWSAELEDAGEGTSKRMKES 238
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ +IS+ W +D +TGS+DH +KVWD + + ++
Sbjct: 239 GVRT-PKITLQGHRESISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKAEISTNKSIF 295
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L +H+++ A D +RL D + + T GH + TV WST+ E++
Sbjct: 296 DASYSKL--NHLILTASA-DKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 352
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 353 VSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVL 384
Score = 44 (20.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 318 YLLSAGSDSRIRLWDVESGRNTLV-NFET 345
Y++S GSD+ +R++ R LV N +T
Sbjct: 393 YIVSGGSDNTVRVF---KSRKALVENMDT 418
>UNIPROTKB|Q29KQ0 [details] [associations]
symbol:GA19813 "Ribosome biogenesis protein WDR12 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH379061 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 HSSP:P61964 KO:K14863
OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001356065.1
ProteinModelPortal:Q29KQ0 GeneID:4816649 KEGG:dpo:Dpse_GA19813
FlyBase:FBgn0079809 InParanoid:Q29KQ0 Uniprot:Q29KQ0
Length = 419
Score = 197 (74.4 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 58/212 (27%), Positives = 99/212 (46%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
+N E VS KG ++S+ V +R+ +G+ D+ + V+ + EG K
Sbjct: 180 ANTVECVSVCKGHERGVDSVSVSPDGQRFA-TGSWDTMLKVWSAELEDAGEGTSKRMKES 238
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ +IS+ W +D +TGS+DH +KVWD + + ++
Sbjct: 239 GVRT-PKITLQGHRESISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKAEISTNKSIF 295
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L +H+++ A D +RL D + + T GH + TV WST+ E++
Sbjct: 296 DASYSKL--NHLILTASA-DKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 352
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 353 VSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVL 384
Score = 44 (20.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 318 YLLSAGSDSRIRLWDVESGRNTLV-NFET 345
Y++S GSD+ +R++ R LV N +T
Sbjct: 393 YIVSGGSDNTVRVF---KSRKALVENMDT 418
>UNIPROTKB|B4KKN1 [details] [associations]
symbol:GI17814 "Ribosome biogenesis protein WDR12 homolog"
species:7230 "Drosophila mojavensis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH933807
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002003253.1
ProteinModelPortal:B4KKN1 EnsemblMetazoa:FBtr0168539 GeneID:6577286
KEGG:dmo:Dmoj_GI17814 FlyBase:FBgn0140555 InParanoid:B4KKN1
Uniprot:B4KKN1
Length = 419
Score = 190 (71.9 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 57/212 (26%), Positives = 96/212 (45%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V +R+ +G+ D+ + ++ + E AK
Sbjct: 180 SNAVECVSVCKGHERGVDSVCVSPDAQRFA-TGSWDTMLKIWSAELEDAGESTAKRAKES 238
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V + GH+ +IS+ W +D +TGS+DH +KVWD N + ++
Sbjct: 239 GVRT-PRMTLQGHRESISAVQW--MDNNTLLTGSWDHTLKVWDLNLEGIKTEISTNKSIF 295
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WS + E++
Sbjct: 296 DASHSKL---NNLIVTASADKNLRLYDARTNQGSVVRSTYLGHNAWVQTVMWSITEEFLF 352
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 353 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 384
Score = 51 (23.0 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 318 YLLSAGSDSRIRLWDVESGRNTLVNFET 345
Y++S G+D+ +R++ +S + T+ N ET
Sbjct: 393 YIVSGGADNTVRVF--KSSKATVENMET 418
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 206 (77.6 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 87/356 (24%), Positives = 144/356 (40%)
Query: 81 GGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVM 140
G + K + ++Q H + S ++ P D V+GSYD VK+WD ++
Sbjct: 728 GWSQLPKVEQTWSAEQQTLENHLGPVESVVFSP-DGKQLVSGSYDDTVKIWDPATGELLQ 786
Query: 141 NFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
G V A SP L+A+G+ D + L D A+G + QT GH I +V ++
Sbjct: 787 TLDGHSGTVESLAFSP---DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFA 843
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKSL--SAGQNSSVK 257
+ L + D I+ WD+ + LD S SQ R L S+ +S++K
Sbjct: 844 PDGKE-LASASDDSTIKIWDLATGELQQTLD-SHSQSVRSVAFSPDGKLLASSSLDSTIK 901
Query: 258 PRAPQ----KRSANGNGVRQSSVGRIP-----AKGSVRQRL---HPGMLSSQDRATAHYG 305
P ++S G SV P A GS + + +P H
Sbjct: 902 VWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQ 961
Query: 306 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESG--RNTLVNFET-VRLQTSKPIQLATTQDP 362
+V + + DG L S+ SD+ I+LW+ +G + T + +R P
Sbjct: 962 SVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSP------DGK 1015
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+V +K +D+ + + + H V+ FS D++L + D I +W
Sbjct: 1016 HLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLW 1071
Score = 161 (61.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 80/342 (23%), Positives = 143/342 (41%)
Query: 96 KQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRT-AMS 154
+Q G + S + P D +GS + VK+W+ ++ + + R+ A S
Sbjct: 911 QQSLEGRSGWVKSVAFSP-DGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFS 969
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P +A+ + D ++L + +G + QT GH I V +S + LV+G D
Sbjct: 970 PDGKQ---LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKH-LVSGSDDNT 1025
Query: 215 IRFWDIRRAGCFRVL-DQSQS--QLGRRPPLLKRKSLSAGQNSSVK----PRAPQKRSAN 267
I+ WD+ + + L D S+S + P ++ S+ +S++K +R+
Sbjct: 1026 IKLWDLATSELQQSLEDHSRSVHAVAFSPD--DKQLASSSLDSTIKLWDSATGELQRTLE 1083
Query: 268 GN--GVRQ---SSVGRIPAKGSVRQRL---HPGMLSSQDRATAHYGAVTGLKVTEDGMYL 319
G+ GVR S G++ A S + +P Q T V + + DG L
Sbjct: 1084 GHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQL 1143
Query: 320 LSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT-AVKAFDI 378
S DS I+LWD +G L+ +T+ + + + + D ++ K +D
Sbjct: 1144 ASGYYDSTIKLWDSATGE--LL--QTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDP 1199
Query: 379 WSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCP 420
+G+ F GH ++V FS + L + I +W P
Sbjct: 1200 ATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDP 1241
Score = 153 (58.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 80/317 (25%), Positives = 137/317 (43%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GH I + + P D V+GS D+ +K+WD + + + + + V+ A SP
Sbjct: 1000 GHDLWIRAVAFSP-DGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSP---D 1055
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+A+ + D ++L D A+G + +TL GH G+ +V +S + +L + DG I+ W+
Sbjct: 1056 DKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGK-LLASNSYDGTIKLWN 1114
Query: 220 IRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQ-NSSVK--PRAPQK--RSANGNGVRQS 274
+ L + K L++G +S++K A + ++ G+ R
Sbjct: 1115 PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQ 1174
Query: 275 SV-----GRIPAKGSVRQ--RL-HPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 326
SV G++ A GS Q +L P H V + + DG L S+
Sbjct: 1175 SVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGE 1234
Query: 327 RIRLWDVESGRNTLVNFETVRLQT-SKPIQLATTQDPAVVFVPC---MTAVKAFD--IW- 379
I+LWD +G LQT + P + A + V F P + +V FD IW
Sbjct: 1235 TIKLWDPVTGE---------LLQTLNDPDESAGS----VAFSPDGNRLASVDIFDTKIWD 1281
Query: 380 --SGKTCLTFRGHYEYV 394
+G+ +GH ++V
Sbjct: 1282 PATGELLQALKGHSKWV 1298
Score = 45 (20.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
++ + H G + S+ V + + L+SG+ D +V ++D
Sbjct: 743 QQTLENHLGPVESV-VFSPDGKQLVSGSYDDTVKIWD 778
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/212 (27%), Positives = 97/212 (45%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V R+ +G+ D+ + V+ ++ EG K
Sbjct: 181 SNSVECVSVCKGHERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAEQEDAAEGSSKRMKES 239
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ ++S+ W +D +TGS+DH +KVWD + + ++
Sbjct: 240 GVRT-PKITLQGHRESVSAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIF 296
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WST+ E++
Sbjct: 297 DASYSKL---NRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 354 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 385
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 194 (73.4 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 58/212 (27%), Positives = 96/212 (45%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V +R+ +G+ D+ + V+ + EG K
Sbjct: 180 SNTAECVSVCKGHERGVDSVSVSPDGQRFA-TGSWDTMLKVWSAELDDAGEGTSKRMKES 238
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ +IS+ W +D +TGS+DH +KVWD + + ++
Sbjct: 239 GVRT-PKMTLQGHRESISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIF 295
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + V WST+ E++
Sbjct: 296 DASYSNL---NRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLF 352
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 353 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 384
Score = 37 (18.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 5/14 (35%), Positives = 12/14 (85%)
Query: 318 YLLSAGSDSRIRLW 331
Y++S G+D+ +R++
Sbjct: 393 YIVSGGADNSVRVF 406
>UNIPROTKB|B4P116 [details] [associations]
symbol:GE13328 "Ribosome biogenesis protein WDR12 homolog"
species:7245 "Drosophila yakuba" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM000157 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
EMBL:AY231921 RefSeq:XP_002088279.1 ProteinModelPortal:B4P116
STRING:B4P116 EnsemblMetazoa:FBtr0259846 GeneID:6527185
KEGG:dya:Dyak_GE13328 FlyBase:FBgn0068268 Uniprot:B4P116
Length = 420
Score = 191 (72.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 58/212 (27%), Positives = 96/212 (45%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V R+ +G+ D+ + V+ + EG K
Sbjct: 181 SNSVECVSVCKGHERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAEVEDAVEGSSKRMKES 239
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ ++S+ W +D +TGS+DH +KVWD + + ++
Sbjct: 240 GVRT-PKITLQGHRESVSAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIF 296
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WST+ E++
Sbjct: 297 DASYSKL---NRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 354 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 385
>FB|FBgn0032298 [details] [associations]
symbol:CG6724 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005654 EMBL:AE014134
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 HSSP:P63005 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
GeneTree:ENSGT00640000091456 EMBL:AY118871 RefSeq:NP_609452.1
UniGene:Dm.37812 ProteinModelPortal:Q9VKQ3 SMR:Q9VKQ3 IntAct:Q9VKQ3
MINT:MINT-818926 STRING:Q9VKQ3 PaxDb:Q9VKQ3 PRIDE:Q9VKQ3
EnsemblMetazoa:FBtr0080191 GeneID:34488 KEGG:dme:Dmel_CG6724
UCSC:CG6724-RA FlyBase:FBgn0032298 InParanoid:Q9VKQ3
PhylomeDB:Q9VKQ3 GenomeRNAi:34488 NextBio:788731 Bgee:Q9VKQ3
Uniprot:Q9VKQ3
Length = 420
Score = 189 (71.6 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 58/212 (27%), Positives = 96/212 (45%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V R+ +G+ D+ + V+ + EG K
Sbjct: 181 SNSVECVSVCKGHERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAELDDAVEGSSKRMKES 239
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ ++S+ W +D +TGS+DH +KVWD + + ++
Sbjct: 240 GVRT-PKITLQGHRESVSAVQW--MDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIF 296
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WST+ E++
Sbjct: 297 DASYSKL---NRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 354 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 385
>UNIPROTKB|B4LS78 [details] [associations]
symbol:GJ17641 "Ribosome biogenesis protein WDR12 homolog"
species:7244 "Drosophila virilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH940649 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_002052609.1 ProteinModelPortal:B4LS78 STRING:B4LS78
EnsemblMetazoa:FBtr0233566 GeneID:6629233 KEGG:dvi:Dvir_GJ17641
FlyBase:FBgn0204810 InParanoid:B4LS78 Uniprot:B4LS78
Length = 419
Score = 188 (71.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 58/212 (27%), Positives = 94/212 (44%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V +R+ +G+ D+ + ++ EG K
Sbjct: 180 SNAVECVSVCKGHERGVDSVCVSPDAQRFA-TGSWDTMLKIWSAGLDDTSEGTAKRVKES 238
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ +IS+ W +D VTGS+DH +KVWD + ++
Sbjct: 239 GVRT-PKMTLQGHRESISAVQW--MDATTLVTGSWDHTLKVWDLQLEGIKTEISTNKSIF 295
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WS + E++
Sbjct: 296 DASYSKL---NRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVMWSNTEEFLF 352
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 353 VSGSYDTQNKLWDCRSPKAPLYDLLGHGEKVL 384
>POMBASE|SPBC428.19c [details] [associations]
symbol:utp15 "U3 snoRNP protein Utp15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030490 "maturation of SSU-rRNA" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] [GO:0034455 "t-UTP
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC428.19c
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GenomeReviews:CU329671_GR HSSP:P16649 GO:GO:0032040 GO:GO:0030490
GO:GO:0034455 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK PIR:T40471
RefSeq:NP_595197.1 ProteinModelPortal:O94365 STRING:O94365
EnsemblFungi:SPBC428.19c.1 GeneID:2540858 KEGG:spo:SPBC428.19c
OrthoDB:EOG4TB7KP NextBio:20801974 Uniprot:O94365
Length = 494
Score = 148 (57.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMN----FKMPGKVYRTAMSPLAASHMLIAAGTEDV 170
D L + G V+++D + TR ++ + P V+ T P A + L +G++D
Sbjct: 92 DGKLLLAGDATGLVQIFDLS-TRSILRALDAHQFP--VHVTQFCPYANTTFL--SGSDDK 146
Query: 171 QVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
V++ D+++GA+ LSGH D + T W +++ LV+GG DG IR WD R A
Sbjct: 147 TVKVWDLSTGAVQYDLSGHEDYVRTASWMSATR--LVSGGYDGTIRLWDTRIA 197
Score = 116 (45.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRV-VMNFKMPGKVYRTAMSPLAAS 159
GH+ + +A W T L V+G YD +++WDT VM+F G+ + P+ +
Sbjct: 164 GHEDYVRTASWMSA-TRL-VSGGYDGTIRLWDTRIADPEVMSFSH-GEAIDVVL-PMQSG 219
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQT--LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+I+AG ++V D+ +G + T LS H+ I + ++ + +L +GG DG ++
Sbjct: 220 STVISAGGPSIKV--WDLVAGRQTPTKKLSNHQKSITCLAMNSENTRLL-SGGLDGHVKI 276
Query: 218 WDI 220
++I
Sbjct: 277 YNI 279
Score = 87 (35.7 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 25/103 (24%), Positives = 48/103 (46%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVR-LQTSKPIQLATTQDPAVVFVPCMTAVKAFD 377
L+S G D IRLWD +++F + P+Q +T V ++K +D
Sbjct: 180 LVSGGYDGTIRLWDTRIADPEVMSFSHGEAIDVVLPMQSGST-----VISAGGPSIKVWD 234
Query: 378 IWSGKTCLTFR--GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ +G+ T + H + + C +S++ L +GG D + ++
Sbjct: 235 LVAGRQTPTKKLSNHQKSITCLAMNSENTRLLSGGLDGHVKIY 277
Score = 51 (23.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 60 LSGASDSSVAVYDVQR-ATDYEGGGH 84
LSG+ D +V V+D+ A Y+ GH
Sbjct: 140 LSGSDDKTVKVWDLSTGAVQYDLSGH 165
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/130 (25%), Positives = 62/130 (47%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK ++ W D+ V+ S D +K+++ +R+ K V+ +P ++
Sbjct: 127 GHKLGVNDIAWSS-DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS- 184
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ +G+ D VR+ D+ +G +TL H D + V ++ ++ +G DG +R WD
Sbjct: 185 --LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGS-LIASGSYDGLVRIWD 241
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 242 TANGQCIKTL 251
Score = 137 (53.3 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 38/133 (28%), Positives = 73/133 (54%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPL 156
GH +ISSA + P G ++ T S D VK+W+ + C R + K+ G V A S
Sbjct: 85 GHTKSISSAKFSPC--GKYLGTSSADKTVKIWNMDHMICERTLTGHKL-G-VNDIAWS-- 138
Query: 157 AASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+ S +++A ++D +++ +I + +++TL GH + + ++ S ++V+G D ++R
Sbjct: 139 SDSRCVVSA-SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-LVVSGSFDESVR 196
Query: 217 FWDIRRAGCFRVL 229
WD++ C + L
Sbjct: 197 IWDVKTGMCIKTL 209
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 37/165 (22%), Positives = 73/165 (44%)
Query: 265 SANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHY-------G---AVTGLKVTE 314
S + N + S+ PA G+ Q +P + +A+Y G +++ K +
Sbjct: 38 STSPNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSP 97
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP-AVVFVPCMTAV 373
G YL ++ +D +++W+++ ++ T+ +A + D VV +
Sbjct: 98 CGKYLGTSSADKTVKIWNMDH----MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 374 KAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K F+I + + T +GH YV CC F+ Q + +G D + +W
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Score = 92 (37.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 30/123 (24%), Positives = 53/123 (43%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+ + DG + S D +R+WD +G+ TLV+ E + K +
Sbjct: 211 AHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVK----FSP 266
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQD----QELYTGGNDRQI 415
++ + +K +D GKT + GH E C F++ + + +G D +I
Sbjct: 267 NGKYILASNLDSTLKLWDFSKGKTLKQYTGH-ENSKYCIFANFSVTGGKWIISGSEDCKI 325
Query: 416 LVW 418
+W
Sbjct: 326 YIW 328
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/130 (25%), Positives = 62/130 (47%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK ++ W D+ V+ S D +K+++ +R+ K V+ +P ++
Sbjct: 127 GHKLGVNDIAWSS-DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS- 184
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ +G+ D VR+ D+ +G +TL H D + V ++ ++ +G DG +R WD
Sbjct: 185 --LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGS-LIASGSYDGLVRIWD 241
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 242 TANGQCIKTL 251
Score = 137 (53.3 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 38/133 (28%), Positives = 73/133 (54%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPL 156
GH +ISSA + P G ++ T S D VK+W+ + C R + K+ G V A S
Sbjct: 85 GHTKSISSAKFSPC--GKYLGTSSADKTVKIWNMDHMICERTLTGHKL-G-VNDIAWS-- 138
Query: 157 AASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+ S +++A ++D +++ +I + +++TL GH + + ++ S ++V+G D ++R
Sbjct: 139 SDSRCVVSA-SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-LVVSGSFDESVR 196
Query: 217 FWDIRRAGCFRVL 229
WD++ C + L
Sbjct: 197 IWDVKTGMCIKTL 209
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 37/165 (22%), Positives = 73/165 (44%)
Query: 265 SANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHY-------G---AVTGLKVTE 314
S + N + S+ PA G+ Q +P + +A+Y G +++ K +
Sbjct: 38 STSPNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSP 97
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP-AVVFVPCMTAV 373
G YL ++ +D +++W+++ ++ T+ +A + D VV +
Sbjct: 98 CGKYLGTSSADKTVKIWNMDH----MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 374 KAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K F+I + + T +GH YV CC F+ Q + +G D + +W
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Score = 92 (37.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 30/123 (24%), Positives = 53/123 (43%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+ + DG + S D +R+WD +G+ TLV+ E + K +
Sbjct: 211 AHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVK----FSP 266
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQD----QELYTGGNDRQI 415
++ + +K +D GKT + GH E C F++ + + +G D +I
Sbjct: 267 NGKYILASNLDSTLKLWDFSKGKTLKQYTGH-ENSKYCIFANFSVTGGKWIISGSEDCKI 325
Query: 416 LVW 418
+W
Sbjct: 326 YIW 328
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 69/274 (25%), Positives = 120/274 (43%)
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
L+A+G+ D ++L D ASG + QTL GH + +V +S + + +L +G D I+ W+
Sbjct: 55 LLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQ-LLASGSSDTTIKLWNSA 113
Query: 222 RAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSV-KPRAPQ-KRSANGNG-----VRQS 274
++ ++ +S++ N + P K + G+ V S
Sbjct: 114 SDSLKHTMEGHSDRV---------ESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFS 164
Query: 275 SVGRIPAKGSVRQRLH---PGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLW 331
G++ A GS + + + H V L + DG L S +D+ I+LW
Sbjct: 165 PDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLW 224
Query: 332 DVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTA-VKAFDIWSGKTCLTFRGH 390
D SG +L + T+ ++K LA + + ++ A +K +D +G T +GH
Sbjct: 225 DPPSG--SLKH--TLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGH 280
Query: 391 YEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 424
+ V FS Q L +G D I +W P+ I
Sbjct: 281 SDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGI 314
Score = 152 (58.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAAS 159
GH + ++ P D L +GS D +K+WD + + K+ A SP +
Sbjct: 195 GHSNWVLPLVFSP-DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSP---N 250
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+A+G+ D ++L D A+G+ TL GH D +++V +S S+ +L +G D I+ WD
Sbjct: 251 GQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQ-LLESGSGDNTIKLWD 309
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 55/208 (26%), Positives = 98/208 (47%)
Query: 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD-VQRATDYEGGGHIAKHRSV-FV 93
K+ + H S+ S+ + L SG+SD+++ +++ + + GH + SV F
Sbjct: 76 KQTLEGHSSSVQSVAFS-PNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFS 134
Query: 94 VDKQ----------HE-HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT-NCTRVVMN 141
+ Q H GH + S + P D L +GS + +K+WD+ C +
Sbjct: 135 PNGQLWNPAIGSLKHTIEGHSDWVLSVAFSP-DGQLLASGSAEKTIKLWDSATCG---LK 190
Query: 142 FKMPGKVYRTAMSPLAASH--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ G + + PL S L+A+G+ D ++L D SG++ TL GH + I ++ +S
Sbjct: 191 HTLGG--HSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFS 248
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFR 227
+ + +L +G D I+ WD G FR
Sbjct: 249 PNGQ-LLASGSSDATIKLWDTA-TGSFR 274
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 64/241 (26%), Positives = 102/241 (42%)
Query: 184 QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLL 243
QTL GH D I TV +S +L +G D I+ WD G + L+ S +
Sbjct: 35 QTLEGHSDWIETVTFSPDGR-LLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 244 KRKSLSAGQN-SSVK--PRAPQ--KRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQD 298
+ L++G + +++K A K + G+ R SV P G Q +P + S +
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP-NG---QLWNPAIGSLKH 149
Query: 299 RATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLAT 358
H V + + DG L S ++ I+LWD S L + T+ ++ + L
Sbjct: 150 TIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD--SATCGLKH--TLGGHSNWVLPLVF 205
Query: 359 TQDPAVVFVPCMTA-VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILV 417
+ D ++ A +K +D SG T GH + FS Q L +G +D I +
Sbjct: 206 SPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKL 265
Query: 418 W 418
W
Sbjct: 266 W 266
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 186 (70.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 84/398 (21%), Positives = 161/398 (40%)
Query: 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQH 98
++ H +I + ++SG+ DS+ ++D T H K + +V+
Sbjct: 144 IAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPL----HTLKGHTSWVL---- 195
Query: 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMS--P 155
A+S Y + + TGS D+ V++WD + + + G V + T+++ P
Sbjct: 196 ------AVS----YSPNGAMIATGSMDNTVRIWDAKKGQA-LGAPLKGHVKWITSLAWEP 244
Query: 156 L---AASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCD 212
+ H +A+ ++D VR+ D+ S LSGH+ + V W + + + T D
Sbjct: 245 YHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK--IYTSSHD 302
Query: 213 GAIRFWDIRRAGCFRVLDQSQ---SQLGRRPPLLKRKSLS--AG---QNSSVKPRAPQKR 264
I+ W+ + + L + L + R + G ++ + K +KR
Sbjct: 303 RTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKR 362
Query: 265 SANGNGVRQSSVGR-IPAKGSVRQRLHPGMLSSQD--RATAHYGAVTGLKVTEDGMYLLS 321
+ V + + A L SS+ R H V + + D Y+ S
Sbjct: 363 FEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIAS 422
Query: 322 AGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWS 380
AG D+ ++LW+ G+ T+R Q + D ++ T +K +++ +
Sbjct: 423 AGFDNHVKLWNGRDGKF----ITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRT 478
Query: 381 GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
GK GH + V +S Q++ +GG D+ I +W
Sbjct: 479 GKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 193 (73.0 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 89/351 (25%), Positives = 148/351 (42%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH A+ S + + D+ L + S D VK+WDT T + N + G + + + SH
Sbjct: 261 GHDRAVGS-VSFSHDSRLLASASGDGTVKIWDT-ATSFLQN-TLEG--HNEWVKSVVFSH 315
Query: 161 --MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ ++D V++ D A+G + + L GH D + +V +S S ++ +G D +R W
Sbjct: 316 DSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSR-LIASGSNDRTVRIW 374
Query: 219 DIRRAGCFRVL--DQSQSQLGRRPPLLKRKSLSAGQNSSVK---PRAPQKRSA-NG---- 268
+ G R D S + R+ SA +VK R ++ G
Sbjct: 375 ETT-TGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDC 433
Query: 269 -NGVRQSSVGRIPAKGSVRQRL---HPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGS 324
N V S R+ A S + + H S Q H V + + D + SA
Sbjct: 434 VNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASD 493
Query: 325 DSRIRLWDVESG--RNTLVNFET-VR-LQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS 380
D +++WD + +N L + + VR + S +L + MT VK +D +
Sbjct: 494 DMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDD------MT-VKIWDTAT 546
Query: 381 GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS----RHISDG 427
G T GH + VN FS + L + +D + +W + +H DG
Sbjct: 547 GSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDG 597
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 182 (69.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 59/236 (25%), Positives = 108/236 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDK 96
++ H+ ++ + + ++ R + +G+ D+ + ++ D + +K R +K
Sbjct: 193 QVCKGHERGVDCIAANRSKTR-MATGSWDTMLKIWSTDVRNDGDSQPSTSK-RQKLDTEK 250
Query: 97 QHEH-----GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRT 151
GH+ IS W +D VT S+DH +K+WD + + ++ G
Sbjct: 251 ARTPVLTLAGHRECISGVQW--IDDNTLVTSSWDHTIKIWDLALSGI--KSEICG---HK 303
Query: 152 AMSPLAASHM--LIAAGTEDVQVRLCDIAS--GAI-SQTLSGHRDGIMTVEWSTSSEWIL 206
+ L+ SH+ LI A + D +RL D S G I T GH + +V WST++E++
Sbjct: 304 SFFDLSYSHLNGLIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYLF 363
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQLG---RRPPLLKRKSLSAGQNSSVK 257
V+G D ++ WD R +A F ++ L P + LS G ++SV+
Sbjct: 364 VSGAYDNHVKLWDYRSPKAPIFELIGHEDKVLACDWSNPKFI----LSGGSDNSVR 415
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 156 (60.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 39/130 (30%), Positives = 62/130 (47%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK IS W D+ L V+GS D +KVW+ + + + K V+ +P +
Sbjct: 112 GHKLGISDVAWSS-DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSN- 169
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D VR+ D+ +G +TL H D + V ++ ++V+ DG R WD
Sbjct: 170 --LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWD 226
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 227 TASGQCLKTL 236
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 43/171 (25%), Positives = 79/171 (46%)
Query: 258 PRAPQKRSANG-NGVRQSSVGRIPAKGSVRQRL-HPGMLSSQDRAT------AHYGAVTG 309
P+ P + +G N ++ +SVG+ A S + LS + T H AV+
Sbjct: 18 PQQPLPTAPSGPNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSA 77
Query: 310 LKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE-TVRLQTSKPIQLATTQDPAVVFVP 368
+K + +G +L S+ +D I++W G+ FE T+ +A + D ++
Sbjct: 78 VKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSDSRLLVSG 132
Query: 369 CMT-AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+K +++ +GK+ T +GH YV CC F+ Q + +G D + +W
Sbjct: 133 SDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
Score = 112 (44.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 108 SAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIA 164
SA+ + D L V+ SYD ++WDT C + +++ P V SP + I
Sbjct: 202 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSP---NGKYIL 257
Query: 165 AGTEDVQVRLCDIASGAISQTLSGHRDGIMTV--EWS-TSSEWILVTGGCDGAIRFWDIR 221
A T D ++L D + G +T +GH++ + +S T +WI V+G D + W+++
Sbjct: 258 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI-VSGSEDNMVYIWNLQ 316
Score = 100 (40.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 140 MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ F + G + + + +A+ + D +++ G +T+SGH+ GI V WS
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 123
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ S +LV+G D ++ W++ + L
Sbjct: 124 SDSR-LLVSGSDDKTLKVWELSTGKSLKTL 152
Score = 66 (28.3 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 24/116 (20%), Positives = 49/116 (42%)
Query: 307 VTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATTQDPAV 364
V+ +K + +G Y+L+A D+ ++LWD G+ T + + + T +
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA--NFSVTGGKWI 301
Query: 365 VFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGG--NDRQILVW 418
V V +++ S + +GH + V C + + + ND+ I +W
Sbjct: 302 VSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 50 (22.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 10/39 (25%), Positives = 25/39 (64%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
+++ +S HK I+ + ++ R L+SG+ D ++ V+++
Sbjct: 106 FEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKVWEL 143
>UNIPROTKB|B4MU54 [details] [associations]
symbol:GK23981 "Ribosome biogenesis protein WDR12 homolog"
species:7260 "Drosophila willistoni" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
EMBL:CH963852 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB
HAMAP:MF_03029 RefSeq:XP_002064657.1 ProteinModelPortal:B4MU54
STRING:B4MU54 EnsemblMetazoa:FBtr0254632 GeneID:6641752
KEGG:dwi:Dwil_GK23981 FlyBase:FBgn0225943 InParanoid:B4MU54
Uniprot:B4MU54
Length = 423
Score = 181 (68.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 60/215 (27%), Positives = 100/215 (46%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V R+ +G+ D+ + V+ A D GG + R
Sbjct: 182 SNAVECVSICKGHERGVDSISVSPDATRFA-TGSWDTMLKVWSA--AEDDAGGDAASSKR 238
Query: 90 ---SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
+ GH+ +IS+ W +DT +T S+DH +K+WD + +
Sbjct: 239 PKENGVRTPIMTLQGHRESISAVQW--IDTSTLLTTSWDHTMKIWDLSLEGIKTEISTNK 296
Query: 147 KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS--GAISQ-TLSGHRDGIMTVEWSTSSE 203
++ + S L + LI + D +RL D + G+I + T GH + TV WST+ E
Sbjct: 297 SIFDASYSNL---NRLIVTASADKNLRLYDPRTNQGSIVRNTYLGHNAWVQTVMWSTTEE 353
Query: 204 WILVTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
++ V+G D + WD R +A + +L + L
Sbjct: 354 FLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 388
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 181 (68.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 54/193 (27%), Positives = 94/193 (48%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDV---QRATDYEGGGHIAKHRS------VF 92
H GS++S+ VD + ++ SG+ D + ++ + +YE + + +
Sbjct: 188 HAGSVDSIAVDASRTKFC-SGSWDKMLKIWSAVPSEEEDEYEETSDRPRKKQKTEKMGLT 246
Query: 93 VVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRT- 151
+ GH A+SS +W VD + S+DH +K+WD T V + KV+
Sbjct: 247 RIPIVTLSGHSEAVSSVLWSDVDE--ICSASWDHNIKIWDVE-TGTVKSTLAGNKVFNCI 303
Query: 152 AMSPLAASHMLIAAGTEDVQVRLCDIAS--GAISQ-TLSGHRDGIMTVEWSTSSEWILVT 208
+ SPL+ +A+G+ D +RL D S G++ +L+ H + +V+WS S E LV+
Sbjct: 304 SYSPLSQR---LASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVS 360
Query: 209 GGCDGAIRFWDIR 221
G D ++ WD R
Sbjct: 361 GSLDKLVKLWDTR 373
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 140 (54.3 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 123 SYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI 182
S ++++D N V+ NFK+P VY +S + ++ L A G D + + DI +G +
Sbjct: 79 SQSQLLRIFDLNKGSVIKNFKLPSPVY---ISSVDSTSSLFAFGGSDGVITVWDIENGYV 135
Query: 183 SQTLSGHRDGIMTVEWS---TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ +L GH I ++ + S +W L +G G ++ WD+ + C L
Sbjct: 136 THSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTL 185
Score = 129 (50.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 44/197 (22%), Positives = 80/197 (40%)
Query: 42 HKGSIN--SLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHE 99
H G+I SL E ++L++G++D ++ + + + S+ +
Sbjct: 426 HAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPN-----------SIVKTSEYTR 474
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
H I+S P D F T SYD KVW T+ + K G
Sbjct: 475 RAHDKDINSIDVSPNDE-YFATASYDKLGKVWQTDSGETIGVLK--GHKRGLWDINFYKF 531
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI G+ D +++ + + +TL GH + + V++ L++ G DG I+ WD
Sbjct: 532 DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWD 591
Query: 220 IRRAGCFRVLDQSQSQL 236
++ + LD ++
Sbjct: 592 YKQGEIIKSLDNHDQRI 608
Score = 93 (37.8 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 299 RATAHYGAVTGLKVTE---DGMYLLSAGSDSRIRLWDVESGRNTLVNF-ETVRLQTSKPI 354
R H GA+T + +++ + +L++ +D I+ W + + N++V E R K I
Sbjct: 422 RFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDI 481
Query: 355 QLATTQDPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGN 411
+ P + + K +W SG+T +GH + F D+ + TG
Sbjct: 482 N-SIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSG 540
Query: 412 DRQILVW 418
D+ I VW
Sbjct: 541 DKTIKVW 547
Score = 76 (31.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 41/193 (21%), Positives = 77/193 (39%)
Query: 34 NYKEIVS-PHKGSINSLQ-VDLTEER-YLLSGASDSSVAVYDVQRATDYEGGGHIA--KH 88
N+K I + P I + V L ++R Y +G S++ + ++D+ ++ + G I +
Sbjct: 220 NFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDI-KSGEMIGRSPIPLKTN 278
Query: 89 RSVFVVD--KQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
+ ++D K + + IS +D G + + D + ++ G
Sbjct: 279 EELLIIDVIKLYNNNLYLVISDQTLIELDLQELTPGHGHGHGQ--DDEIVEFPIVKRIAG 336
Query: 147 KVYRTA-MSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWI 205
A + + L+A T +R+ DI + GH D + V+ ST +WI
Sbjct: 337 NQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWI 396
Query: 206 LVTGGCDGAIRFW 218
T D R W
Sbjct: 397 -ATASKDNEARLW 408
Score = 65 (27.9 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 10/45 (22%), Positives = 28/45 (62%)
Query: 310 LKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 354
+ + +D Y + GS++ +++WD++SG ++ + L+T++ +
Sbjct: 239 VSLIDDRQYFYTGGSENVLKIWDIKSGE--MIGRSPIPLKTNEEL 281
Score = 61 (26.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 33/129 (25%), Positives = 51/129 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFET-VRLQ----TSKPIQLA 357
H + + V+ DG ++ +A D+ RLW L +FE R Q I L+
Sbjct: 380 HTDILNAVDVSTDGKWIATASKDNEARLW---RWNGELQDFEPFARFQGHAGAITAISLS 436
Query: 358 TTQDPAVVFVPCMT--AVKAFDIWSG-----KTC-LTFRGHYEYVNCCCFSSQDQELYTG 409
+Q+ V T +K + I + KT T R H + +N S D+ T
Sbjct: 437 KSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATA 496
Query: 410 GNDRQILVW 418
D+ VW
Sbjct: 497 SYDKLGKVW 505
Score = 57 (25.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 303 HYGAVTGLKV-TEDGMYLLSAGSDSRIRLWDVESG 336
H +V +K + LLS G+D I+LWD + G
Sbjct: 561 HTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQG 595
Score = 47 (21.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 295 SSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
+S+ AH + + V+ + Y +A D ++W +SG
Sbjct: 469 TSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSG 510
Score = 46 (21.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 372 AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
A++ DI + GH + +N S+ + + T D + +W
Sbjct: 362 ALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLW 408
Score = 45 (20.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLW 331
H + + + DG Y +A +D ++ W
Sbjct: 604 HDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 43 (20.2 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 382 KTCLTFRGHYEYVNCCCFSS--QDQE-LYTGGNDRQILVW 418
KT TF + E + F S D++ YTGG++ + +W
Sbjct: 222 KTINTFPIN-EQIEAAGFVSLIDDRQYFYTGGSENVLKIW 260
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 140 (54.3 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 123 SYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI 182
S ++++D N V+ NFK+P VY +S + ++ L A G D + + DI +G +
Sbjct: 79 SQSQLLRIFDLNKGSVIKNFKLPSPVY---ISSVDSTSSLFAFGGSDGVITVWDIENGYV 135
Query: 183 SQTLSGHRDGIMTVEWS---TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ +L GH I ++ + S +W L +G G ++ WD+ + C L
Sbjct: 136 THSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTL 185
Score = 129 (50.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 44/197 (22%), Positives = 80/197 (40%)
Query: 42 HKGSIN--SLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHE 99
H G+I SL E ++L++G++D ++ + + + S+ +
Sbjct: 426 HAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPN-----------SIVKTSEYTR 474
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
H I+S P D F T SYD KVW T+ + K G
Sbjct: 475 RAHDKDINSIDVSPNDE-YFATASYDKLGKVWQTDSGETIGVLK--GHKRGLWDINFYKF 531
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI G+ D +++ + + +TL GH + + V++ L++ G DG I+ WD
Sbjct: 532 DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWD 591
Query: 220 IRRAGCFRVLDQSQSQL 236
++ + LD ++
Sbjct: 592 YKQGEIIKSLDNHDQRI 608
Score = 93 (37.8 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 299 RATAHYGAVTGLKVTE---DGMYLLSAGSDSRIRLWDVESGRNTLVNF-ETVRLQTSKPI 354
R H GA+T + +++ + +L++ +D I+ W + + N++V E R K I
Sbjct: 422 RFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDI 481
Query: 355 QLATTQDPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGN 411
+ P + + K +W SG+T +GH + F D+ + TG
Sbjct: 482 N-SIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSG 540
Query: 412 DRQILVW 418
D+ I VW
Sbjct: 541 DKTIKVW 547
Score = 76 (31.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 41/193 (21%), Positives = 77/193 (39%)
Query: 34 NYKEIVS-PHKGSINSLQ-VDLTEER-YLLSGASDSSVAVYDVQRATDYEGGGHIA--KH 88
N+K I + P I + V L ++R Y +G S++ + ++D+ ++ + G I +
Sbjct: 220 NFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDI-KSGEMIGRSPIPLKTN 278
Query: 89 RSVFVVD--KQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
+ ++D K + + IS +D G + + D + ++ G
Sbjct: 279 EELLIIDVIKLYNNNLYLVISDQTLIELDLQELTPGHGHGHGQ--DDEIVEFPIVKRIAG 336
Query: 147 KVYRTA-MSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWI 205
A + + L+A T +R+ DI + GH D + V+ ST +WI
Sbjct: 337 NQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWI 396
Query: 206 LVTGGCDGAIRFW 218
T D R W
Sbjct: 397 -ATASKDNEARLW 408
Score = 65 (27.9 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 10/45 (22%), Positives = 28/45 (62%)
Query: 310 LKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 354
+ + +D Y + GS++ +++WD++SG ++ + L+T++ +
Sbjct: 239 VSLIDDRQYFYTGGSENVLKIWDIKSGE--MIGRSPIPLKTNEEL 281
Score = 61 (26.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 33/129 (25%), Positives = 51/129 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFET-VRLQ----TSKPIQLA 357
H + + V+ DG ++ +A D+ RLW L +FE R Q I L+
Sbjct: 380 HTDILNAVDVSTDGKWIATASKDNEARLW---RWNGELQDFEPFARFQGHAGAITAISLS 436
Query: 358 TTQDPAVVFVPCMT--AVKAFDIWSG-----KTC-LTFRGHYEYVNCCCFSSQDQELYTG 409
+Q+ V T +K + I + KT T R H + +N S D+ T
Sbjct: 437 KSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATA 496
Query: 410 GNDRQILVW 418
D+ VW
Sbjct: 497 SYDKLGKVW 505
Score = 57 (25.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 303 HYGAVTGLKV-TEDGMYLLSAGSDSRIRLWDVESG 336
H +V +K + LLS G+D I+LWD + G
Sbjct: 561 HTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQG 595
Score = 47 (21.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 295 SSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
+S+ AH + + V+ + Y +A D ++W +SG
Sbjct: 469 TSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSG 510
Score = 46 (21.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 372 AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
A++ DI + GH + +N S+ + + T D + +W
Sbjct: 362 ALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLW 408
Score = 45 (20.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLW 331
H + + + DG Y +A +D ++ W
Sbjct: 604 HDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 43 (20.2 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 382 KTCLTFRGHYEYVNCCCFSS--QDQE-LYTGGNDRQILVW 418
KT TF + E + F S D++ YTGG++ + +W
Sbjct: 222 KTINTFPIN-EQIEAAGFVSLIDDRQYFYTGGSENVLKIW 260
>UNIPROTKB|B4HWV6 [details] [associations]
symbol:GM11446 "Ribosome biogenesis protein WDR12 homolog"
species:7238 "Drosophila sechellia" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH480818 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002036578.1
ProteinModelPortal:B4HWV6 EnsemblMetazoa:FBtr0194431 GeneID:6612061
KEGG:dse:Dsec_GM11446 FlyBase:FBgn0166389 Uniprot:B4HWV6
Length = 420
Score = 180 (68.4 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 53/195 (27%), Positives = 89/195 (45%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN + VS KG ++S+ V R+ +G+ D+ + V+ + EG K
Sbjct: 181 SNAVDCVSVCKGHERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAELDDGVEGSSKRMKES 239
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ ++S+ W +D +TGS+D+ +KVWD + + ++
Sbjct: 240 GVRT-PKITLQGHRESVSAVQW--MDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIF 296
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WST+ E++
Sbjct: 297 DASYSKL---NRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 207 VTGGCDGAIRFWDIR 221
V+G D + WD R
Sbjct: 354 VSGAYDNQNKLWDCR 368
>UNIPROTKB|B4Q9T6 [details] [associations]
symbol:GD22226 "Ribosome biogenesis protein WDR12 homolog"
species:7240 "Drosophila simulans" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CM000361 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002079018.1
ProteinModelPortal:B4Q9T6 EnsemblMetazoa:FBtr0222136 GeneID:6731883
KEGG:dsi:Dsim_GD22226 FlyBase:FBgn0193635 Uniprot:B4Q9T6
Length = 420
Score = 180 (68.4 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 53/195 (27%), Positives = 89/195 (45%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN + VS KG ++S+ V R+ +G+ D+ + V+ + EG K
Sbjct: 181 SNAVDCVSVCKGHERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAELDDGVEGSSKRMKES 239
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ ++S+ W +D +TGS+D+ +KVWD + + ++
Sbjct: 240 GVRT-PKITLQGHRESVSAVQW--MDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIF 296
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WST+ E++
Sbjct: 297 DASYSKL---NRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 207 VTGGCDGAIRFWDIR 221
V+G D + WD R
Sbjct: 354 VSGAYDNQNKLWDCR 368
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 149 (57.5 bits), Expect = 8.6e-11, Sum P(3) = 8.6e-11
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
H H+ S + + ++G TG D VK+WDTN ++ + + G + +
Sbjct: 222 HAHEGGCGSIV-FEYNSGTLFTGGQDRAVKMWDTNSGTLIKS--LYGSLGNILDMAVTHD 278
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+ + A T + + D++SG + TL+GH D + V+ S S +V+ D I+ WD
Sbjct: 279 NKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 338
Query: 220 IRRAGC 225
+ + C
Sbjct: 339 LHKGYC 344
Score = 78 (32.5 bits), Expect = 8.6e-11, Sum P(3) = 8.6e-11
Identities = 34/139 (24%), Positives = 62/139 (44%)
Query: 289 LHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRL 348
LH G ++ T++ A+ L + DG+ + S D +RLWD+++G+ L++ V
Sbjct: 339 LHKGYCTNTVLFTSNCNAIC-LSI--DGLTVFSGHMDGNLRLWDIQTGK--LLS--EVAG 391
Query: 349 QTSKPIQLATTQDPAVVFVPCMTAV-KAFDIWSGKTCLTFR--GHYEYVNCC--CFSSQD 403
+S ++ +++ + V FD + + C T R G+ N C S D
Sbjct: 392 HSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDD 451
Query: 404 QELYTGGNDRQILVWCPSR 422
+ G D + VW S+
Sbjct: 452 DYVAAGSADGSVHVWSLSK 470
Score = 37 (18.1 bits), Expect = 8.6e-11, Sum P(3) = 8.6e-11
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 36 KEIVSPHKGSINSLQVDLTEER 57
K I+ + IN LQ +LT+ R
Sbjct: 83 KAILQEKELLINDLQKELTQRR 104
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 140 (54.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 43/195 (22%), Positives = 88/195 (45%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVV 94
+ + ++ H +++S++ ++ R L S ++D ++ Y + D IA+ F
Sbjct: 16 HSQTLTSHNRAVSSVKFS-SDGRLLASASADKTIRTYTINTIND-----PIAEPVQEFT- 68
Query: 95 DKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMS 154
GH+ IS + + D V+ S D +K+WD ++ + Y ++
Sbjct: 69 ------GHENGISD-VAFSSDARFIVSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVN 120
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
S+M+++ G+ D VR+ D+ +G + L H D + V+++ ++V+ DG
Sbjct: 121 FNPQSNMIVS-GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGS-LIVSSSYDGL 178
Query: 215 IRFWDIRRAGCFRVL 229
R WD C + L
Sbjct: 179 CRIWDSGTGHCVKTL 193
Score = 119 (46.9 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 35/139 (25%), Positives = 63/139 (45%)
Query: 94 VDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR-VVMNFKMPGKVYRTA 152
V Q H A+SS + + D L + S D ++ + N + +
Sbjct: 15 VHSQTLTSHNRAVSS-VKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG 73
Query: 153 MSPLAASH--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGG 210
+S +A S I + ++D ++L D+ +G++ +TL GH + V ++ S I V+G
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI-VSGS 132
Query: 211 CDGAIRFWDIRRAGCFRVL 229
D +R WD+ C +VL
Sbjct: 133 FDETVRIWDVTTGKCLKVL 151
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 38/144 (26%), Positives = 63/144 (43%)
Query: 279 IPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRN 338
IPA S +H L+S +RA V+ +K + DG L SA +D IR + + + +
Sbjct: 5 IPATASFTPYVHSQTLTSHNRA------VSSVKFSSDGRLLASASADKTIRTYTINTIND 58
Query: 339 TLVNFETVRLQTSKP---IQLATTQDPA-VVFVPCMTAVKAFDIWSGKTCLTFRGHYEYV 394
+ E V+ T +A + D +V +K +D+ +G T GH Y
Sbjct: 59 PIA--EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYA 116
Query: 395 NCCCFSSQDQELYTGGNDRQILVW 418
C F+ Q + +G D + +W
Sbjct: 117 FCVNFNPQSNMIVSGSFDETVRIW 140
Score = 87 (35.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 31/125 (24%), Positives = 51/125 (40%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH VT + DG ++S+ D R+WD +G TL++ E + P+
Sbjct: 153 AHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDE------NPPVSFVRF 206
Query: 360 QDPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHY--EYVNCCCFS-SQDQELYTGGNDR 413
P F+ T +W S K T+ GH +Y FS + + + +G D
Sbjct: 207 S-PNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN 265
Query: 414 QILVW 418
+ +W
Sbjct: 266 CVHMW 270
Score = 78 (32.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 24/113 (21%), Positives = 49/113 (43%)
Query: 307 VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVF 366
V+ ++ + +G ++L D+ +RLW++ S + V Q + T +V
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 367 VPCMTAVKAFDIWSGKTCLTFRGHYEYV-NCCCFSSQDQELYTGGNDRQILVW 418
V +++ S K GH E V N C +++ + +G D+ + +W
Sbjct: 261 GSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENL-IASGSLDKTVRIW 312
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 137 (53.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK--MPGKVYRTAMSPLAA 158
GH +S+ + P D + +G D VKVW + +++ F+ + G + + SP A
Sbjct: 174 GHLRGVSAVRFSP-DASMIASGGADGAVKVWAASTGKLIYTFEGHLAG-ISTISWSPDGA 231
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQT-LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ IA+G++D +RL ++ +G T GH + + + +S +LV+G D A+
Sbjct: 232 T---IASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGN-MLVSGSYDEAVFL 287
Query: 218 WDIRRAGCFRVL 229
WD+R A + L
Sbjct: 288 WDVRSARVMKSL 299
Score = 89 (36.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+G+ V DG + S +D +R+WD +G+ TLV+ + + P+ +
Sbjct: 301 AHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVH------EDNPPVS-SVK 353
Query: 360 QDPAVVFVPCMT---AVKAFDIWSGKTCLTFRGH 390
P +V T V+ +D G+ T++GH
Sbjct: 354 FSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGH 387
>SGD|S000002437 [details] [associations]
symbol:RAD28 "Protein involved in DNA repair" species:4932
"Saccharomyces cerevisiae" [GO:0006281 "DNA repair"
evidence=IEA;IGI] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IC] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002437 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006281
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 KO:K10570
OrthoDB:EOG4BS0W2 GeneTree:ENSGT00390000009065 RefSeq:NP_010317.3
GeneID:851598 KEGG:sce:YDR034C EMBL:Z47814 EMBL:Z74326 PIR:S50937
RefSeq:NP_010313.3 ProteinModelPortal:Q12021 SMR:Q12021
DIP:DIP-5177N IntAct:Q12021 MINT:MINT-573314 STRING:Q12021
EnsemblFungi:YDR030C GeneID:851594 KEGG:sce:YDR030C CYGD:YDR030c
eggNOG:NOG271357 HOGENOM:HOG000065962 OMA:RMYRQSS NextBio:969078
Genevestigator:Q12021 GermOnline:YDR030C Uniprot:Q12021
Length = 506
Score = 172 (65.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 39/126 (30%), Positives = 65/126 (51%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
HKY I++ WY D G+F TGS D VK+WDTN V + + K+ + + + S +
Sbjct: 194 HKYGITTLKWYKADNGMFFTGSNDKTVKIWDTNRFEAVQDINLGYKINQIDNNVVDDSSL 253
Query: 162 LIAAGTEDVQVRLCDIA---SGAISQTLSGH---RDGIMTVEWSTSSEWILVTGGCDGAI 215
L+ A +ED RL D+ SG + + + I+ +++ E I+ G +G +
Sbjct: 254 LVVA-SEDYYPRLIDLRTMNSGVTALGMGNQTRMQSEILCCKFNPVREQIIACGDMEGGV 312
Query: 216 RFWDIR 221
+ WD+R
Sbjct: 313 KLWDLR 318
Score = 124 (48.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 50/213 (23%), Positives = 95/213 (44%)
Query: 20 NRVKSHRLSTLQLSNY--KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT 77
+ +K++R S + SNY KE +P +N L +D T + LL G D S++++ + +
Sbjct: 35 SNMKNYRFS--KQSNYSTKE-KTPLSIGVNCLDIDDTGQ-VLLGGGDDGSLSIWGLDESL 90
Query: 78 --DYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNC 135
+ EG + R ++ + H+ + P + G + ++ D N
Sbjct: 91 HRNDEGEQELINKRLNYIKRQPHQSDDE---------PAQ----IMGYKNKRTRINDNNT 137
Query: 136 TRVVMNFKMPGKVYR-----TAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ-TLSGH 189
R+V +F+ YR +A P+ SH+ + D + + S S+ ++S H
Sbjct: 138 MRLVHSFQTQRNKYRMYRQSSAAVPVQRSHI---SNKTDSPIGFSETLSETDSEASISHH 194
Query: 190 RDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
+ GI T++W + + TG D ++ WD R
Sbjct: 195 KYGITTLKWYKADNGMFFTGSNDKTVKIWDTNR 227
Score = 50 (22.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 296 SQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLW 331
S +++ AH + + +G L S G D ++ +W
Sbjct: 351 SSNQSKAHLRCCSDIVWNSEGSELCSVGMDGKLNVW 386
Score = 47 (21.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 393 YVNCCC---FSSQDQELYTGGNDRQILVWCPSRHI 424
++ CC ++S+ EL + G D ++ VW P I
Sbjct: 358 HLRCCSDIVWNSEGSELCSVGMDGKLNVWRPFTEI 392
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177
L ++GS D K+WD + F P K TA+S A+ + G ++ V++ D+
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDAADKIFTGGVDN-DVKVWDL 209
Query: 178 ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
G + TL GH+D I + S ++L T G D + WD+R
Sbjct: 210 RKGEATMTLEGHQDTITGMSLSPDGSYLL-TNGMDNKLCVWDMR 252
Score = 118 (46.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 38/137 (27%), Positives = 59/137 (43%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GHK AI W D V+ S D V+ WD + + + + P
Sbjct: 94 GHKNAILDLHWTS-DGSQIVSASPDKTVRAWDVETGKQIKKMAEHSS-FVNSCCPTRRGP 151
Query: 161 MLIAAGTEDVQVRLCDIAS-GAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G++D +L D+ GAI QT I V +S +++ I TGG D ++ WD
Sbjct: 152 PLIISGSDDGTAKLWDMRQRGAI-QTFPDKYQ-ITAVSFSDAADKIF-TGGVDNDVKVWD 208
Query: 220 IRRAGCFRVLDQSQSQL 236
+R+ L+ Q +
Sbjct: 209 LRKGEATMTLEGHQDTI 225
Score = 103 (41.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 32/119 (26%), Positives = 56/119 (47%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNTLVN-FETVRLQTSKPIQLATT 359
H +TG+ ++ DG YLL+ G D+++ +WD+ + +N V FE + K + L +
Sbjct: 221 HQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL-LKCS 279
Query: 360 QDPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQI 415
P V ++ + IW S +T GH VN C F + + + +D+ I
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
Score = 98 (39.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 32/136 (23%), Positives = 63/136 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPL--AA 158
GH A+ + + P T L +GS+D + +W + NF M K ++ A+ L +
Sbjct: 51 GHPSAVYTMKFNPAGT-LIASGSHDREIFLWRVHGD--CKNF-MVLKGHKNAILDLHWTS 106
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
I + + D VR D+ +G + ++ H + + + ++++G DG + W
Sbjct: 107 DGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW 166
Query: 219 DIRRAGCFRVL-DQSQ 233
D+R+ G + D+ Q
Sbjct: 167 DMRQRGAIQTFPDKYQ 182
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 85/397 (21%), Positives = 159/397 (40%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H ++ S+ T +YL SG+ D++V +D+ T + F G
Sbjct: 113 HSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPH------------FTCK-----G 154
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMS--PLAAS 159
H++ + S W P D +G + + +WD + + V + T +S PL A+
Sbjct: 155 HRHWVLSISWSP-DGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213
Query: 160 H--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+A+ ++D VR+ D +G + L+GH + + W + +L + D I+
Sbjct: 214 PECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKV 271
Query: 218 WDIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRA-PQKRSANGNGVRQSSV 276
W R L Q L +L G + PQ + +++ ++
Sbjct: 272 WRAHDGVLCRTL-QGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERAL 330
Query: 277 GRIP-AKGSVRQRLHPG------MLSS--QD-----RATAHYGAVTGLKVTEDGMYLLSA 322
R +G +RL G L S +D R T H + + + D + SA
Sbjct: 331 SRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASA 390
Query: 323 GSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSG 381
D I+LWD +G+ ++R + Q+A + D ++ + +K +D+ +
Sbjct: 391 SFDKSIKLWDGRTGKY----LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 382 KTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K + GH + V +S Q + +GG D+ + +W
Sbjct: 447 KLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 87/398 (21%), Positives = 161/398 (40%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H ++ S+ T +YL SG+ D++V +D+ T + F G
Sbjct: 114 HSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPH------------FTCQ-----G 155
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMS--PLAAS 159
H++ + S W P D +G + + +WD + + V + TA+S PL A+
Sbjct: 156 HRHWVLSISWSP-DGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHAN 214
Query: 160 H--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+A+ ++D VR+ D +G +TL+GH + + W + +L + D I+
Sbjct: 215 PECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWG--GDGLLYSASQDRTIKV 272
Query: 218 WDIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAG--QNSSVKPRAPQKRSANGNGVRQSS 275
W R L Q L +L G + + A R + +++ +
Sbjct: 273 WRAHDGVLCRTL-QGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQE-LKERA 330
Query: 276 VGRIP-AKGSVRQRLHPG------MLSS--QD-----RATAHYGAVTGLKVTEDGMYLLS 321
+ R +G +RL G L S +D R T H + + + D + S
Sbjct: 331 LSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIAS 390
Query: 322 AGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWS 380
A D I+LWD +G+ ++R + Q+A + D ++ + +K +D+ +
Sbjct: 391 ASFDKSIKLWDGRTGKY----LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 446
Query: 381 GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K GH + V +S Q + +GG D+ + +W
Sbjct: 447 QKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 154 (59.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H +SS + L TG D V +W N +M+ + G L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS--LTGHTSPVESVRLNTPEE 76
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
LI AG++ +R+ D+ + I +TL GH+ I ++++ E++ +G D I+ WDIR
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIR 135
Query: 222 RAGC-FRVLDQSQS 234
R GC FR SQ+
Sbjct: 136 RKGCVFRYRGHSQA 149
Score = 108 (43.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD V ++ + R SP
Sbjct: 103 GHKANICSLDFHPY--GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCD 212
+A+ +D V+L D+ +G + GH + VE+ + E++L +G D
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSD 210
Score = 51 (23.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H + S++++ T E +++G+ S+ V+D++ A
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA 95
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 154 (59.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H +SS + L TG D V +W N +M+ + G L
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS--LTGHTSPVESVRLNTPEE 80
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
LI AG++ +R+ D+ + I +TL GH+ I ++++ E++ +G D I+ WDIR
Sbjct: 81 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIR 139
Query: 222 RAGC-FRVLDQSQS 234
R GC FR SQ+
Sbjct: 140 RKGCVFRYRGHSQA 153
>UNIPROTKB|A8QB65 [details] [associations]
symbol:Bm1_47965 "Ribosome biogenesis protein WDR12
homolog" species:6279 "Brugia malayi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HAMAP:MF_03029 EMBL:DS239429 RefSeq:XP_001901055.1
ProteinModelPortal:A8QB65 GeneID:6104478 KEGG:bmy:Bm1_47965
CTD:6104478 Uniprot:A8QB65
Length = 433
Score = 171 (65.3 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 54/195 (27%), Positives = 93/195 (47%)
Query: 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQR---ATDYEG--GGHIAKHRSVF 92
++ H+ S+ ++ V+ T+ +SG D + V++ + +T +E K +
Sbjct: 200 VLRGHERSVEAIAVN-TDGTRTVSGGFDKMLKVWNTDKDDTSTVFEKTRSEKTGKKKRTD 258
Query: 93 VVDKQHE---HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
++ K GHK AI SA+W P +T S+DH + +WD + N K +
Sbjct: 259 IITKIPMVTLSGHKDAIVSAVWSPNSAKEVLTVSWDHTISIWDLELAGQI-NTLAAKKAF 317
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIAS--GA-ISQTLSGHRDGIMTVEWSTSSEWIL 206
T++S +S MLI G+ D VRL D S G + Q+ GH I +V W+ E +
Sbjct: 318 -TSISVCCSSGMLIT-GSVDPVVRLWDPRSHEGTLVKQSFIGHCGWISSVFWNKVKENLF 375
Query: 207 VTGGCDGAIRFWDIR 221
++ D ++ WD+R
Sbjct: 376 ISASFDKTVKMWDVR 390
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 118 (46.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 41/168 (24%), Positives = 76/168 (45%)
Query: 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174
+ L G D +++WDT +NF G V TA+ ML A+G++D + L
Sbjct: 76 SSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAV--TALRYNKVGSML-ASGSKDNDIIL 132
Query: 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQS 234
D+ + L GHRD + + + + LV+ D +R WD+ C +++ S
Sbjct: 133 WDVVGESGLFRLRGHRDQVTDLVFLDGGKK-LVSSSKDKFLRVWDLETQHCMQIVSGHHS 191
Query: 235 QLGRRPPLLKRKSLSAGQ-NSSVKPRAPQKRSANGNGVRQSSVGRIPA 281
++ + + + G + ++ A ++ S+NG+ V S+ I A
Sbjct: 192 EVWSVDTDPEERYVVTGSADQELRFYAVKEYSSNGSLVSDSNANEIKA 239
Score = 108 (43.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 34/157 (21%), Positives = 70/157 (44%)
Query: 271 VRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRL 330
V Q+ G + K V + + G + + AH G + + + ++ +D ++
Sbjct: 454 VPQNKYGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKF 513
Query: 331 WDVE----SGRNT----LVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSG 381
W+ + SG+ T + N +++++ + +A + D + V + + VK F + S
Sbjct: 514 WEYQVKQKSGKATKKLTVSNVKSMKMNDDV-LAVAISPDAKHIAVALLDSTVKVFYMDSL 572
Query: 382 KTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K L+ GH V C SS + + TG D+ + +W
Sbjct: 573 KFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIW 609
Score = 92 (37.4 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 28/128 (21%), Positives = 52/128 (40%)
Query: 105 AISSAIWYPVDTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHM 161
++ S I Y TG +V V +W C++ + G S +++
Sbjct: 19 SVDSNIAYD-STGKYVLAPALEKVGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASS 77
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI- 220
L+A G D +R+ D G + H+ + + ++ +L +G D I WD+
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGS-MLASGSKDNDIILWDVV 136
Query: 221 RRAGCFRV 228
+G FR+
Sbjct: 137 GESGLFRL 144
Score = 90 (36.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 39/140 (27%), Positives = 61/140 (43%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPL 156
+GHK + I D L VTGS D +K+W + C + + F V +
Sbjct: 579 YGHKLPVM-CIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI--FAHGDSVMGVKF--V 633
Query: 157 AASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+H L + G +D V+ D TL GH I + S ++ LVTG D ++R
Sbjct: 634 RNTHYLFSIG-KDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDF-LVTGSHDRSMR 691
Query: 217 FWDIRRAGCFRVLDQSQSQL 236
WD R F + ++ + +L
Sbjct: 692 RWD-RSEEPFFLEEEKEKRL 710
Score = 84 (34.6 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 21/82 (25%), Positives = 41/82 (50%)
Query: 19 ANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD 78
+++ K R+ L+ + +IVS H + S+ D EERY+++G++D + Y V+ +
Sbjct: 166 SSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTD-PEERYVVTGSADQELRFYAVK---E 221
Query: 79 YEGGGHIAKHRSVFVVDKQHEH 100
Y G + + + EH
Sbjct: 222 YSSNGSLVSDSNANEIKASEEH 243
Score = 78 (32.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 23/117 (19%), Positives = 51/117 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V + ++ DG +++ D +++W ++ G +++ + + ++
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDC----HKSIFAHGDSVMGVKFVRNT 636
Query: 363 AVVF-VPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+F + VK +D + LT GH+ + C S++ L TG +DR + W
Sbjct: 637 HYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRW 693
Score = 67 (28.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTL 340
AH +V G+K + YL S G D ++ WD + + L
Sbjct: 622 AHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLL 660
Score = 56 (24.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
HKG++ +L+ + L SG+ D+ + ++DV G + HR V D G
Sbjct: 105 HKGAVTALRYNKVGSM-LASGSKDNDIILWDV---VGESGLFRLRGHRDQ-VTDLVFLDG 159
Query: 102 HKYAISSA------IWYPVDTGLFVTGSYDHYVKVWDTN 134
K +SS+ +W ++T + H+ +VW +
Sbjct: 160 GKKLVSSSKDKFLRVW-DLETQHCMQIVSGHHSEVWSVD 197
Score = 52 (23.4 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 188 GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230
GHR + +V S + ++ T + ++ W+ C R +D
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHSE--VKIWNPSTGSCLRTID 444
Score = 50 (22.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
H V + ++ED L+S S S +++W+ +G
Sbjct: 405 HRSDVRSVTLSEDNTLLMST-SHSEVKIWNPSTG 437
Score = 44 (20.5 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 226 FRVLDQSQSQ--LGRRPPLLKRKSLSAG-QNSSVKPRAPQK 263
FRVLD+++++ RR ++KS G +NS+ A K
Sbjct: 290 FRVLDEAEAKQKAKRRLRRKEKKSSKVGDENSTANGEASAK 330
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 170 (64.9 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 56/195 (28%), Positives = 91/195 (46%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHE-- 99
H GS++S+ VD T ++ SG+ D + ++ TD E + +R K +
Sbjct: 188 HAGSVDSIAVDSTGTKFC-SGSWDKMLKIWSTV-PTDEEDEMEESTNRPR-KKQKTEQLG 244
Query: 100 ---------HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYR 150
GHK AISS +W D + S+DH +KVWD + KV+
Sbjct: 245 LTRTPIVTLSGHKEAISSVLWS--DAEEICSASWDHTIKVWDVESGSLKSTLT-GNKVFN 301
Query: 151 T-AMSPLAASHMLIAAGTEDVQVRLCD--IASGA-ISQTLSGHRDGIMTVEWSTSSEWIL 206
+ SPL +A+G+ D +RL D G+ +S +L+ H + +V+WS + E L
Sbjct: 302 CISYSPLCKR---LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQL 358
Query: 207 VTGGCDGAIRFWDIR 221
++G D ++ WD R
Sbjct: 359 ISGSLDNMVKLWDTR 373
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 96 KQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMS 154
K+ +GH IS W D+ V+ S D +KVWD + + K V+ +
Sbjct: 74 KKTLYGHSLEISDVAWSS-DSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFN 132
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P S+ LI +G+ D V++ ++ +G +TLS H D I V ++ + ++V+G DG
Sbjct: 133 P--PSN-LIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGS-LIVSGSYDGL 188
Query: 215 IRFWDIRRAGCFRVL 229
R WD C R L
Sbjct: 189 CRIWDAASGQCLRTL 203
Score = 130 (50.8 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 34/132 (25%), Positives = 68/132 (51%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVW---DTNCTRVVMNFKMPGKVYRTAMSPLA 157
GH AISS + P L + + D + +W D NC + + + ++ A S +
Sbjct: 37 GHSAAISSVKFSPNGEWL-ASSAADALIIIWGAYDGNCKKTLYGHSL--EISDVAWS--S 91
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
S L++A ++D +++ D+ SG +TL GH D + +++ S ++V+G D +++
Sbjct: 92 DSSRLVSA-SDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSN-LIVSGSFDESVKI 149
Query: 218 WDIRRAGCFRVL 229
W+++ C + L
Sbjct: 150 WEVKTGKCLKTL 161
Score = 124 (48.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 32/119 (26%), Positives = 59/119 (49%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG--RNTLVNFETVRLQTSKPIQLATTQ 360
H A++ +K + +G +L S+ +D+ I +W G + TL L+ S +A +
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHS---LEIS---DVAWSS 91
Query: 361 DPA-VVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D + +V +K +D+ SGK T +GH ++V CC F+ + +G D + +W
Sbjct: 92 DSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW 150
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH + + P + L V+GS+D VK+W+ + + +A++ +
Sbjct: 121 GHSDFVFCCDFNP-PSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPI-SAVN-FNCNG 177
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDG-IMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D R+ D ASG +TL+ + + V++S + ++IL T D ++ WD
Sbjct: 178 SLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYIL-TATLDNTLKLWD 236
Query: 220 IRRAGCFR 227
R C +
Sbjct: 237 YSRGRCLK 244
Score = 81 (33.6 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 27/124 (21%), Positives = 50/124 (40%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ 360
+AH ++ + +G ++S D R+WD SG+ T+ + + P+
Sbjct: 162 SAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQC----LRTLADEGNPPVSFVKFS 217
Query: 361 DPAVVFVPCMTAVKAFDIW--SGKTCL-TFRGHYEYVNC--CCFSSQDQE-LYTGGNDRQ 414
P ++ T +W S CL T+ GH C FS ++ + +G D
Sbjct: 218 -PNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNM 276
Query: 415 ILVW 418
+ +W
Sbjct: 277 VYIW 280
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 133 (51.9 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 101 GHKYAISSAIWYPVDTG--LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH ++S YP G L TGS D VK+WD V F+ +V +
Sbjct: 150 GHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFND--T 205
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S +I+ G ++ +++ D+ ++ T+ GH D + + S+ ++L + D +R W
Sbjct: 206 SDQIISGGIDN-DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVW 263
Query: 219 DIR 221
D+R
Sbjct: 264 DVR 266
Score = 125 (49.1 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAAS 159
GH A+ + Y D + + S D V VWD+ V K G + + P
Sbjct: 108 GHSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRG 164
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ G++D V+L DI A QT ++ V ++ +S+ I ++GG D I+ WD
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQI-ISGGIDNDIKVWD 222
Query: 220 IRR 222
+R+
Sbjct: 223 LRQ 225
Score = 110 (43.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 34/105 (32%), Positives = 50/105 (47%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H S+ L + +E YLLS A D++V V+DV+ K R V + + + H
Sbjct: 235 HADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAP--------KERCVKIF-QGNVHN 284
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
+ + W P D GS D +V VWDT RV+ +K+PG
Sbjct: 285 FEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRVL--YKLPG 326
Score = 89 (36.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 33/159 (20%), Positives = 63/159 (39%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ + ++P + L G +D + +W+ +C G V +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAG-FDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--TD 121
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
ML +A T D V + D +G + L GH + + + ++ TG DG ++ W
Sbjct: 122 GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVK 257
DIR+ + + L + +S G ++ +K
Sbjct: 181 DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Score = 88 (36.0 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 26/118 (22%), Positives = 51/118 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNTLVNFETVRLQTSKPIQLATTQ 360
H +VTGL ++ +G YLLS D+ +R+WDV + + V + + L +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 361 DPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQI 415
P + +A + +W S + GH +N F + + + +D+++
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 67 (28.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/116 (24%), Positives = 53/116 (45%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
++S G D+ I++WD+ + T T+R L+ + + + + M V+ +D
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Query: 378 I--WSGKT-CLT-FRG--HYEYVNC--CCFSSQDQELYTGGNDRQILVW-CPSRHI 424
+ ++ K C+ F+G H N C +S ++ G DR + VW SR +
Sbjct: 265 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRV 320
Score = 53 (23.7 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
NY + H G++ L + T+ L S ++D +VAV+D
Sbjct: 102 NYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWD 138
Score = 47 (21.6 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
H G++ + D +LSA SD R+ + +++
Sbjct: 327 HAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 170 (64.9 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 55/229 (24%), Positives = 101/229 (44%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEH- 100
H+ + + V+ + + + SG+ D+ + ++ + D G A ++ D
Sbjct: 198 HERGVGCIAVNPAKTQ-MASGSMDTMLKIWSTELQADK--GEPSATKKAKLEQDNVRTPV 254
Query: 101 ----GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPL 156
GH+ +S W +D T S+DH +K+WD + + F + + SPL
Sbjct: 255 VTLAGHREFVSGVQW--IDNTTIATCSWDHTIKLWDLSMGGIKTEFTGNKSFFDLSYSPL 312
Query: 157 AASHMLIAAGTEDVQVRLCDIAS---GAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDG 213
+ M+I A + D +RL D S + T GH + T WST++E++ V+G D
Sbjct: 313 --NGMIITA-SPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTNEYLFVSGAYDN 369
Query: 214 AIRFWDIR--RAGCFRVLDQSQSQLG---RRPPLLKRKSLSAGQNSSVK 257
++ WD R +A F ++ L P + LS G +++V+
Sbjct: 370 RVKLWDYRSPKAPIFELIGHEDKVLACDWSNPKYI----LSGGSDNAVR 414
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 171 (65.3 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 86/398 (21%), Positives = 160/398 (40%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H ++ S+ T +YL SG+ D++V +D+ T + F G
Sbjct: 113 HSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPH------------FTCQ-----G 154
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMS--PLAAS 159
H++ + S W P D +G + + +WD + + V + TA+S PL A+
Sbjct: 155 HRHWVLSISWSP-DGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHAN 213
Query: 160 H--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+A+ ++D VR+ D +G + L+GH + + W + +L + D I+
Sbjct: 214 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKV 271
Query: 218 WDIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAG--QNSSVKPRAPQKRSANGNGVRQSS 275
W R L Q L +L G + + A R + +++ +
Sbjct: 272 WRAHDGVLCRTL-QGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQE-LKERA 329
Query: 276 VGRIP-AKGSVRQRLHPG------MLSS--QD-----RATAHYGAVTGLKVTEDGMYLLS 321
+ R +G +RL G L S +D R T H + + + D + S
Sbjct: 330 LSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIAS 389
Query: 322 AGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWS 380
A D I+LWD +G+ ++R + Q+A + D ++ + +K +D+ +
Sbjct: 390 ASFDKSIKLWDGRTGKY----LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 445
Query: 381 GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K GH + V +S Q + +GG D+ + +W
Sbjct: 446 QKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 163 (62.4 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 87/346 (25%), Positives = 146/346 (42%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
GH A+ S + P TG ++ +GS D V+ WD + +F G + +
Sbjct: 112 GHSEAVISVAFSP--TGKYLASGSGDTTVRFWDLSTE--TPHFTCQGHRHWVLSISWSPD 167
Query: 160 HMLIAAGTEDVQVRLCDIASGA-ISQTLSGHRDGIMTVEWS---TSSEWILVTGGC-DGA 214
+A+G ++ Q+ L D ++G + + L+GH I + W + E V DG+
Sbjct: 168 GKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGS 227
Query: 215 IRFWDIRRAGCFRVLD-QSQSQLGRR---PPLLKRKSLSAGQNSSVKP-RAPQK---RSA 266
+R WD C R+L +QS R LL SA Q+ ++K RA R+
Sbjct: 228 VRVWDTTAGRCERILTGHTQSVTCLRWGGDGLL----YSASQDRTIKVWRAHDGVLCRTL 283
Query: 267 NGNG--VRQSSV--------GRI-PAKGSVR-QRLHPGMLSSQDRATAHYGAVTGLKVTE 314
G+G V ++ G PA+ SV Q L + ++RA + Y V G
Sbjct: 284 QGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGR---- 339
Query: 315 DGMYLLSAGSDS-RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT-A 372
G+ L +GSD + LW + L + + Q+ + D ++ +
Sbjct: 340 -GLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALIN---QVLFSPDSRIIASASFDKS 395
Query: 373 VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+K +D +GK + RGH V +S+ + L +G +D + VW
Sbjct: 396 IKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 169 (64.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 45/139 (32%), Positives = 70/139 (50%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH + ++P ++ TGS D V++W T N R+ + G V A SP
Sbjct: 424 GHLLDVDCVKFHP-NSNYLATGSTDKTVRLWSTQQGNSVRLFTGHR--GPVLALAFSP-- 478
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
L +AG ED +++L D+ASG + + L GH D I ++ +S S ++ + D ++R
Sbjct: 479 NGKYLASAG-EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSS-LIASASMDNSVRV 536
Query: 218 WDIRRAGCFRVLDQSQSQL 236
WDIR C D S S+L
Sbjct: 537 WDIRNTYCNAPADGSSSEL 555
Score = 110 (43.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ 360
T H G V L + +G YL SAG D R++LWD+ SG TL ++ +R T L +
Sbjct: 465 TGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASG--TL--YKELRGHTDNITSLTFSP 520
Query: 361 DPAVVFVPCM-TAVKAFDI 378
D +++ M +V+ +DI
Sbjct: 521 DSSLIASASMDNSVRVWDI 539
Score = 56 (24.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
+D +C ++ + + K ++ + S + +A D + D A G + L GH
Sbjct: 287 FDNSCVKL---WSLRSKKLKSEPHLVDVSRIRLACDILDEEEEEDDSA-GTEMKILRGHC 342
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
+ + + + S +L D +IR+WD+R
Sbjct: 343 GPVYSTRFLSDSSGLLSCSE-DMSIRYWDLR 372
Score = 46 (21.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD---YEG 81
+I+ H G + S + L++ LLS + D S+ +D++ T+ Y+G
Sbjct: 336 KILRGHCGPVYSTRF-LSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQG 382
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 131 (51.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 37/123 (30%), Positives = 67/123 (54%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GHK A+ S+ + + +T S D+ VK+WDT +++ + + +TA S
Sbjct: 54 GHKGAVWSSRFNSTASQA-LTASADYTVKLWDTLNGSEILSIEHQS-IVKTADFSNNNSR 111
Query: 161 MLIAAGTEDVQVRLCDIA--SGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+ + G+E + +R+ D+ + + Q +SGH + I T WS ++ I+++GG D IR W
Sbjct: 112 V-VTGGSEKI-LRIFDLERPNDPLLQ-ISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIW 168
Query: 219 DIR 221
D+R
Sbjct: 169 DLR 171
Score = 77 (32.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 28/118 (23%), Positives = 54/118 (45%)
Query: 306 AVTGLKVTEDGMYLLS-AGSDSRIRLWDVESGRNTLVNFETVRLQTSKP--IQLATTQDP 362
++T ++ ++D +L++ AG++ + WD +S F +++ S P + A+
Sbjct: 183 SITSMEFSKDRRFLVTTAGNE--VTFWDAQS-------FYPLKVY-SLPFDVNCASLHPD 232
Query: 363 AVVFVPCMTA--VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
F+ + V +D +G +GH+ VNCC FS +G D I +W
Sbjct: 233 NSKFIAGGSDFWVHVYDFSTGNEIEVNKGHHGPVNCCRFSPDGASFASGSLDGTIRLW 290
Score = 61 (26.5 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 25/100 (25%), Positives = 42/100 (42%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDI 378
+LS G D IR+WD+ SG T V+ TS + ++D + V +D
Sbjct: 156 VLSGGLDEVIRIWDLRSG--TQVSLCAKSSITS----MEFSKDRRFLVTTAGNEVTFWDA 209
Query: 379 WSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
S + ++ VNC + + GG+D + V+
Sbjct: 210 QSFYPLKVYSLPFD-VNCASLHPDNSKFIAGGSDFWVHVY 248
Score = 55 (24.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLW 331
H+G V + + DG S D IRLW
Sbjct: 262 HHGPVNCCRFSPDGASFASGSLDGTIRLW 290
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 132 (51.5 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 101 GHKYAISSAIWYPVDTG--LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH ++S YP G L TGS D VK+WD + F+ +V +
Sbjct: 149 GHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND--T 204
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S +I+ G ++ +++ D+ ++ T+ GH D + + S+ ++L + D +R W
Sbjct: 205 SDQIISGGIDN-DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVW 262
Query: 219 DIR 221
D+R
Sbjct: 263 DVR 265
Score = 125 (49.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAAS 159
GH A+ + Y D + + S D V VWD+ V K G + + P
Sbjct: 107 GHSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRG 163
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ G++D V+L DI A QT ++ V ++ +S+ I ++GG D I+ WD
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQI-ISGGIDNDIKVWD 221
Query: 220 IRR 222
+R+
Sbjct: 222 LRQ 224
Score = 90 (36.7 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 33/159 (20%), Positives = 63/159 (39%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ + ++P + L G +D + +W+ +C G V +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAG-FDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--TD 120
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
ML +A T D V + D +G + L GH + + + ++ TG DG ++ W
Sbjct: 121 GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 179
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVK 257
DIR+ + + L + +S G ++ +K
Sbjct: 180 DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 218
Score = 87 (35.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 26/118 (22%), Positives = 51/118 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNTLVNFETVRLQTSKPIQLATTQ 360
H +VTGL ++ +G YLLS D+ +R+WDV + + V + + L +
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 293
Query: 361 DPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQI 415
P + +A + +W S + GH +N F + + + +D+++
Sbjct: 294 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 351
Score = 68 (29.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
++S G D+ I++WD+ + T T+R L+ + + + + M V+ +D
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263
Query: 378 I--WSGKT-CLT-FRG--HYEYVNC--CCFSSQDQELYTGGNDRQILVW-CPSRHI 424
+ ++ K C+ F+G H N C +S ++ G DR + VW SR I
Sbjct: 264 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI 319
Score = 53 (23.7 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
NY + H G++ L + T+ L S ++D +VAV+D
Sbjct: 101 NYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWD 137
Score = 45 (20.9 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
H G++ + D ++SA SD R+ + +++
Sbjct: 326 HAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 132 (51.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174
D T S D VK+WD+ ++V + + ++H+L+A G+ D ++L
Sbjct: 668 DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727
Query: 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
D+ T+ GH + + +S E +L + DG +R WD+R A
Sbjct: 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSA 775
Score = 94 (38.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 30/116 (25%), Positives = 52/116 (44%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H AV ++ T DG L+S+ DS I++W+ ++G F +T K +L QD
Sbjct: 1002 HKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV---FLQAHQETVKDFRLL--QDS 1056
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
++ VK +++ +G+ F H V C SS + + D+ +W
Sbjct: 1057 RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Score = 86 (35.3 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 38/129 (29%), Positives = 57/129 (44%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD 361
AH V ++ +D LLS D +++W+V +GR +F T T + A + D
Sbjct: 1042 AHQETVKDFRLLQDSR-LLSWSFDGTVKVWNVITGRIER-DF-TCHQGTV--LSCAISSD 1096
Query: 362 PAVVFVPCMTAVKAFDIWSGKTCLTF---RGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
A F +A K IWS +GH V C FS L TG ++ +I +W
Sbjct: 1097 -ATKF-SSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIW 1154
Query: 419 CPSRHISDG 427
++SDG
Sbjct: 1155 ----NVSDG 1159
Score = 81 (33.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 33/133 (24%), Positives = 56/133 (42%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V G+ + DG L+A D IR+W+ + N V Q I + ++
Sbjct: 881 HLSWVHGVMFSPDGSSFLTASDDQTIRVWET---KKVCKNSAIVLKQE---IDVVFQENE 934
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEY-----VNCCCFSSQDQELYTGGNDRQI-L 416
+V + ++ + +GKT G +Y V+CCC S + + G D I +
Sbjct: 935 TMVLA--VDNIRGLQLIAGKT-----GQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKI 987
Query: 417 VWCPSRHI-SDGV 428
+ P+ + S GV
Sbjct: 988 IELPNNRVFSSGV 1000
Score = 79 (32.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILV-TGGCDGAIRFWDIR 221
IA + D +V++ D A+G + T H + + ++ S +L+ TG D ++ WD+
Sbjct: 672 IATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN 731
Query: 222 RAGC 225
+ C
Sbjct: 732 QKEC 735
Score = 65 (27.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 29/125 (23%), Positives = 50/125 (40%)
Query: 294 LSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKP 353
LSS+D V + DG ++ A + ++ L+D+ + L T T +
Sbjct: 788 LSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN-KVLLFDIHTS-GLLAEIHTGHHSTIQY 845
Query: 354 IQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDR 413
+ AV+ + V+ ++I S RGH +V+ FS T +D+
Sbjct: 846 CDFSPYDHLAVIALS-QYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQ 904
Query: 414 QILVW 418
I VW
Sbjct: 905 TIRVW 909
Score = 61 (26.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 293 MLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS-RIRLWDVESGR 337
+LS H G V + DG+ LL+ G D+ IR+W+V G+
Sbjct: 1116 LLSPLHELKGHNGCVRCSAFSLDGI-LLATGDDNGEIRIWNVSDGQ 1160
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 287 QRLHPGMLSSQDRATA-HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
Q LH S + TA H G VT + + D L+SAG ++ W+V +G
Sbjct: 1160 QLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG--YLKWWNVATG 1208
Score = 49 (22.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
T H G V ++ D S +D ++W +
Sbjct: 1082 TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFD 1115
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 372 AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
A+K ++ + + + GH + V F++ + L + D I VW
Sbjct: 984 AIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVW 1030
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 132 (51.5 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 101 GHKYAISSAIWYPVDTG--LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH ++S YP G L TGS D VK+WD + F+ +V +
Sbjct: 150 GHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND--T 205
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S +I+ G ++ +++ D+ ++ T+ GH D + + S+ ++L + D +R W
Sbjct: 206 SDQIISGGIDN-DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVW 263
Query: 219 DIR 221
D+R
Sbjct: 264 DVR 266
Score = 125 (49.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAAS 159
GH A+ + Y D + + S D V VWD+ V K G + + P
Sbjct: 108 GHSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRG 164
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ G++D V+L DI A QT ++ V ++ +S+ I ++GG D I+ WD
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQI-ISGGIDNDIKVWD 222
Query: 220 IRR 222
+R+
Sbjct: 223 LRQ 225
Score = 109 (43.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H S+ L + +E YLLS A D++V V+DV+ K R V + + + H
Sbjct: 235 HADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAP--------KERCVKIF-QGNVHN 284
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
+ + W P D GS D +V VWDT R++ +K+PG
Sbjct: 285 FEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRIL--YKLPG 326
Score = 90 (36.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 33/159 (20%), Positives = 63/159 (39%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ + ++P + L G +D + +W+ +C G V +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAG-FDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--TD 121
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
ML +A T D V + D +G + L GH + + + ++ TG DG ++ W
Sbjct: 122 GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVK 257
DIR+ + + L + +S G ++ +K
Sbjct: 181 DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Score = 87 (35.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 26/118 (22%), Positives = 51/118 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNTLVNFETVRLQTSKPIQLATTQ 360
H +VTGL ++ +G YLLS D+ +R+WDV + + V + + L +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 361 DPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQI 415
P + +A + +W S + GH +N F + + + +D+++
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 68 (29.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
++S G D+ I++WD+ + T T+R L+ + + + + M V+ +D
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Query: 378 I--WSGKT-CLT-FRG--HYEYVNC--CCFSSQDQELYTGGNDRQILVW-CPSRHI 424
+ ++ K C+ F+G H N C +S ++ G DR + VW SR I
Sbjct: 265 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI 320
Score = 53 (23.7 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
NY + H G++ L + T+ L S ++D +VAV+D
Sbjct: 102 NYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWD 138
Score = 47 (21.6 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
H G++ + D +LSA SD R+ + +++
Sbjct: 327 HAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 132 (51.5 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 101 GHKYAISSAIWYPVDTG--LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH ++S YP G L TGS D VK+WD + F+ +V +
Sbjct: 150 GHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND--T 205
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S +I+ G ++ +++ D+ ++ T+ GH D + + S+ ++L + D +R W
Sbjct: 206 SDQIISGGIDN-DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVW 263
Query: 219 DIR 221
D+R
Sbjct: 264 DVR 266
Score = 125 (49.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAAS 159
GH A+ + Y D + + S D V VWD+ V K G + + P
Sbjct: 108 GHSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRG 164
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ G++D V+L DI A QT ++ V ++ +S+ I ++GG D I+ WD
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQI-ISGGIDNDIKVWD 222
Query: 220 IRR 222
+R+
Sbjct: 223 LRQ 225
Score = 109 (43.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H S+ L + +E YLLS A D++V V+DV+ K R V + + + H
Sbjct: 235 HADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAP--------KERCVRIF-QGNVHN 284
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
+ + W P D GS D +V VWDT R++ +K+PG
Sbjct: 285 FEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRIL--YKLPG 326
Score = 90 (36.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 33/159 (20%), Positives = 63/159 (39%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ + ++P + L G +D + +W+ +C G V +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAG-FDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--TD 121
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
ML +A T D V + D +G + L GH + + + ++ TG DG ++ W
Sbjct: 122 GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVK 257
DIR+ + + L + +S G ++ +K
Sbjct: 181 DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Score = 87 (35.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 26/118 (22%), Positives = 51/118 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNTLVNFETVRLQTSKPIQLATTQ 360
H +VTGL ++ +G YLLS D+ +R+WDV + + V + + L +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSW 294
Query: 361 DPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQI 415
P + +A + +W S + GH +N F + + + +D+++
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 68 (29.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
++S G D+ I++WD+ + T T+R L+ + + + + M V+ +D
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Query: 378 I--WSGKT-CLT-FRG--HYEYVNC--CCFSSQDQELYTGGNDRQILVW-CPSRHI 424
+ ++ K C+ F+G H N C +S ++ G DR + VW SR I
Sbjct: 265 VRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI 320
Score = 53 (23.7 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
NY + H G++ L + T+ L S ++D +VAV+D
Sbjct: 102 NYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWD 138
Score = 47 (21.6 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
H G++ + D +LSA SD R+ + +++
Sbjct: 327 HAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 132 (51.5 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 101 GHKYAISSAIWYPVDTG--LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH ++S YP G L TGS D VK+WD + F+ +V +
Sbjct: 150 GHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND--T 205
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S +I+ G ++ +++ D+ ++ T+ GH D + + S+ ++L + D +R W
Sbjct: 206 SDQIISGGIDN-DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVW 263
Query: 219 DIR 221
D+R
Sbjct: 264 DVR 266
Score = 125 (49.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAAS 159
GH A+ + Y D + + S D V VWD+ V K G + + P
Sbjct: 108 GHSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRG 164
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ G++D V+L DI A QT ++ V ++ +S+ I ++GG D I+ WD
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQI-ISGGIDNDIKVWD 222
Query: 220 IRR 222
+R+
Sbjct: 223 LRQ 225
Score = 109 (43.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H S+ L + +E YLLS A D++V V+DV+ K R V + + + H
Sbjct: 235 HADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVRPFAP--------KERCVKIF-QGNVHN 284
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
+ + W P D GS D +V VWDT R++ +K+PG
Sbjct: 285 FEKNLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRIL--YKLPG 326
Score = 90 (36.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 33/159 (20%), Positives = 63/159 (39%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ + ++P + L G +D + +W+ +C G V +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAG-FDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--TD 121
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
ML +A T D V + D +G + L GH + + + ++ TG DG ++ W
Sbjct: 122 GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVK 257
DIR+ + + L + +S G ++ +K
Sbjct: 181 DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Score = 87 (35.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 26/118 (22%), Positives = 51/118 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNTLVNFETVRLQTSKPIQLATTQ 360
H +VTGL ++ +G YLLS D+ +R+WDV + + V + + L +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 361 DPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQI 415
P + +A + +W S + GH +N F + + + +D+++
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 68 (29.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
++S G D+ I++WD+ + T T+R L+ + + + + M V+ +D
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Query: 378 I--WSGKT-CLT-FRG--HYEYVNC--CCFSSQDQELYTGGNDRQILVW-CPSRHI 424
+ ++ K C+ F+G H N C +S ++ G DR + VW SR I
Sbjct: 265 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI 320
Score = 53 (23.7 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
NY + H G++ L + T+ L S ++D +VAV+D
Sbjct: 102 NYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWD 138
Score = 47 (21.6 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
H G++ + D +LSA SD R+ + +++
Sbjct: 327 HAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 134 (52.2 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 101 GHKYAISSAIWYPVDTG--LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH ++S YP G L TGS D VK+WD V F+ +V +
Sbjct: 176 GHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFND--T 231
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S +I+ G ++ +++ D+ ++ T+ GH D + + S+ ++L + D +R W
Sbjct: 232 SDQIISGGIDN-DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRIW 289
Query: 219 DIR 221
D+R
Sbjct: 290 DVR 292
Score = 125 (49.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAAS 159
GH A+ + Y D + + S D V VWD+ V K G + + P
Sbjct: 134 GHSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRG 190
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ G++D V+L DI A QT ++ V ++ +S+ I ++GG D I+ WD
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQI-ISGGIDNDIKVWD 248
Query: 220 IRR 222
+R+
Sbjct: 249 LRQ 251
Score = 88 (36.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 27/118 (22%), Positives = 52/118 (44%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNTLVNFETVRLQTSKPIQLATTQ 360
H +VTGL ++ +G YLLS D+ +R+WDV + + V + + L +
Sbjct: 261 HADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 320
Query: 361 DPAVVFVPCMTAVKAFDIW---SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQI 415
P + +A + +W S + GH VN F ++ + + +D+++
Sbjct: 321 SPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
Score = 88 (36.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 33/159 (20%), Positives = 62/159 (38%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ + ++P L G +D + +W+ +C G V +
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAG-FDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--TD 147
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
ML +A T D V + D +G + L GH + + + ++ TG DG ++ W
Sbjct: 148 GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 206
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVK 257
DIR+ + + L + +S G ++ +K
Sbjct: 207 DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 245
Score = 65 (27.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
++S G D+ I++WD+ + T T+R L+ + + + + M V+ +D
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWD 290
Query: 378 I--WSGKT-CLT-FRGH---YEYVNCCCFSSQDQELYTGGN-DRQILVW-CPSRHI 424
+ ++ K C+ F+G+ +E C S D GG+ DR + VW SR I
Sbjct: 291 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRI 346
Score = 53 (23.7 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
NY + H G++ L + T+ L S ++D +VAV+D
Sbjct: 128 NYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWD 164
Score = 47 (21.6 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
H G+V L + +LSA SD R+ + +++
Sbjct: 353 HAGSVNELAFHPEEPIILSASSDKRLYMGEIQ 384
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 56/246 (22%), Positives = 112/246 (45%)
Query: 18 FANRVKSHRLSTLQLSNYKEIV-----SPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
FA+ K + +++ E+ S H S+ ++ +E +L++G+ D +V ++
Sbjct: 391 FASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWP 450
Query: 73 VQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWD 132
+ A +G GH + VF+ + +H H I+S P D L TGS D K+W
Sbjct: 451 LPEALLSKGTGH--EGGPVFLQAQATQHCHDKDINSVAVAPNDK-LLATGSQDRTAKLWA 507
Query: 133 TNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRD 191
+++ F + ++ SP+ ++A + D ++L + + +T GH
Sbjct: 508 LPRCQLLGTFSGHRRGLWCVQFSPM---DQVLATASADGTIKLWALQDFSCLKTFEGHDA 564
Query: 192 GIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQL-GRRPPLLKRKSLSA 250
++ V + + +L + G DG ++ W I+ C R LD + ++ G L ++L+
Sbjct: 565 SVLKVAFVSRGTQLL-SSGSDGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTG 623
Query: 251 GQNSSV 256
+S V
Sbjct: 624 ASDSRV 629
Score = 92 (37.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVES--GRNTLVNFETVRLQTSKP 353
TAHY AVT L + DG +LS+G D +WD+ S T+ FE+V P
Sbjct: 192 TAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLP 246
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 189 HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCF 226
H + T+ + +S +L TGGCDGA+R WD+ R C+
Sbjct: 108 HTAPVATMAFDPTST-LLATGGCDGAVRVWDVVR--CY 142
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 137 (53.3 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 312 GLMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 369
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 370 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 425
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 426 LVRCIRFDNKRIVSGAYDGKIK 447
Score = 130 (50.8 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 34/123 (27%), Positives = 59/123 (47%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ A++ + D V+ S D +KVW T+ V G ++ ++ L
Sbjct: 342 GHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLN--G--HKRGIACLQYRD 394
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L+ +G+ D +RL DI GA + L GH + + + + +V+G DG I+ WD+
Sbjct: 395 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDL 451
Query: 221 RRA 223
+ A
Sbjct: 452 QAA 454
Score = 87 (35.7 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D ++G D+ +K+WD C +V+ G V L +I G+ D
Sbjct: 229 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT--GSVLC-----LQYDERVIVTGSSDST 281
Query: 172 V-RLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
V R+ D+ +G + TL H + ++ + +S ++VT D +I WD+
Sbjct: 282 VSRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDM 328
Score = 86 (35.3 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W + E VR +A Q
Sbjct: 343 HRAAVN--VVDFDDKYIVSASGDRTIKVWSTST-------CEFVRTLNGHKRGIACLQYR 393
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 394 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 449
Score = 68 (29.0 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVA-VYDV 73
++++ H GS+ LQ D ER +++G+SDS+V+ V+DV
Sbjct: 254 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVSRVWDV 288
Score = 49 (22.3 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 433 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 468
Score = 41 (19.5 bits), Expect = 8.8e-09, Sum P(3) = 8.8e-09
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 472 HSGRVFRLQFDE--FQIISSSHDDTILIWD 499
Score = 41 (19.5 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +E+ ++SG D+S+ ++D
Sbjct: 221 KG-VYCLQYD--DEK-IISGLRDNSIKIWD 246
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 132 (51.5 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 101 GHKYAISSAIWYPVDTG--LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH ++S YP G L TGS D VK+WD + F+ +V +
Sbjct: 150 GHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND--T 205
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S +I+ G ++ +++ D+ ++ T+ GH D + + S+ ++L + D +R W
Sbjct: 206 SDQIISGGIDN-DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVW 263
Query: 219 DIR 221
D+R
Sbjct: 264 DVR 266
Score = 125 (49.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAAS 159
GH A+ + Y D + + S D V VWD+ V K G + + P
Sbjct: 108 GHSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRG 164
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ G++D V+L DI A QT ++ V ++ +S+ I ++GG D I+ WD
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQI-ISGGIDNDIKVWD 222
Query: 220 IRR 222
+R+
Sbjct: 223 LRQ 225
Score = 89 (36.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 33/159 (20%), Positives = 62/159 (38%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ + ++P + L G +D + +W +C G V +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAG-FDRLILLWSVYGDCDNYATLKGHSGAVMELHYN--TD 121
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
ML +A T D V + D +G + L GH + + + ++ TG DG ++ W
Sbjct: 122 GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVK 257
DIR+ + + L + +S G ++ +K
Sbjct: 181 DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Score = 86 (35.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDV 333
H +VTGL ++ +G YLLS D+ +R+WDV
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 53 (23.7 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
NY + H G++ L + T+ L S ++D +VAV+D
Sbjct: 102 NYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWD 138
Score = 46 (21.3 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 314 EDGMYLLSAGSDSRIRLWDVE 334
++G+ +LSA SD R+ + +++
Sbjct: 339 QEGIXILSASSDKRLYMGEIQ 359
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 170 (64.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 46/165 (27%), Positives = 73/165 (44%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ IS W +D VT S+DH +K+WD + + + S L
Sbjct: 258 GHRECISGVQW--IDDNTLVTSSWDHTIKIWDLALNGIKSEISGNKSFFDLSYSKLNG-- 313
Query: 161 MLIAAGTEDVQVRLCDIASGA---ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
LI + D +RL D S + T GH + +V WST++E++ V+G D ++
Sbjct: 314 -LIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVKL 372
Query: 218 WDIR--RAGCFRVLDQSQSQLG---RRPPLLKRKSLSAGQNSSVK 257
WD R +A F ++ L P + LS G ++SV+
Sbjct: 373 WDYRSPKAPIFELIGHEDKVLACDWSNPRFI----LSGGSDNSVR 413
Score = 84 (34.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLV-NFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFD 377
+++A D +RL+D +S + TLV N Q + ++ +TT + V VK +D
Sbjct: 315 IITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVKLWD 374
Query: 378 IWSGKTCL-TFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
S K + GH + V C +S+ + + +GG+D + V+
Sbjct: 375 YRSPKAPIFELIGHEDKVLACDWSNP-RFILSGGSDNSVRVF 415
Score = 76 (31.8 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 27/114 (23%), Positives = 49/114 (42%)
Query: 120 VTGSYDHYVKVWDTNCTRVVMNFKMPGK---VYRTAMSPLAASHMLIAAGTEDVQVRLCD 176
+TG YD+ + +W T +PG V L + A+ ++D V L +
Sbjct: 122 LTGCYDNTLNLWTTKGKH---KLTIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLWE 178
Query: 177 --IASGAIS--QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW--DIRRAG 224
+A+ ++ Q GH G+ + + S+ + TG D ++ W D+R G
Sbjct: 179 WNVAANSVECVQVCKGHERGVDCIA-ANGSKTKMATGSWDTMLKIWSTDVRSGG 231
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 318 YLLSAGSDSRIRLW 331
++LS GSD+ +R++
Sbjct: 402 FILSGGSDNSVRVF 415
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 169 (64.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 76/341 (22%), Positives = 134/341 (39%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVV-MNFKMPGK-VYRTAMSPLA- 157
GH + W P T L T S D V++WD + V K K V A PL
Sbjct: 193 GHAGWVLGVSWSPDGTRL-ATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHL 251
Query: 158 ---ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSS-EWILVTGGCDG 213
+ L++A ++D R+ + +G LSGH+ + V W + ++ T D
Sbjct: 252 WRDGTPRLVSA-SKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDK 310
Query: 214 AIRFWDIRRAGCFRVLDQSQ---SQLGRRPPLLKR-------KSLSA-GQNSSVKPRAPQ 262
++ WD + L + L + R K++ A + + K +
Sbjct: 311 TVKVWDAVKGTLLHDLKSHAHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKAKERY 370
Query: 263 KRSANGNGVRQSSVGR-IPAKGSVRQRLHPGMLSSQD---RATAHYGAVTGLKVTEDGMY 318
+++A G V R + A L + R H V + + DG
Sbjct: 371 EKAARVGG---KIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSM 427
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
+ SAG D+ +LW+ G+ +N T+R + Q + + D ++ T +K ++
Sbjct: 428 IASAGWDNATKLWNARDGK--FIN--TLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWN 483
Query: 378 IWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ +GK GH + V +S Q + +GG D+ + +W
Sbjct: 484 VRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 165 (63.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 49/142 (34%), Positives = 68/142 (47%)
Query: 96 KQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVW----DT-NCTRVVMNFKM-PGKVY 149
K+++H HK +I W P L TGS D YVKV +T N T + F M G +
Sbjct: 655 KRNKH-HKGSIYCVAWSPCGQ-LLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIR 712
Query: 150 RTAM--SPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILV 207
A P + +LI+AG D + D G LSGH I+ + T S W++
Sbjct: 713 DLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALY--TWSGWMIA 770
Query: 208 TGGCDGAIRFWDIRRAGCFRVL 229
+G D +RFWD+R C RV+
Sbjct: 771 SGSQDKTVRFWDLRVPSCVRVV 792
Score = 54 (24.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 25/119 (21%), Positives = 44/119 (36%)
Query: 306 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLV------NFETVRLQTSKPIQLATT 359
AV + V G L + DS L+D+ GR + +VR L +
Sbjct: 802 AVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGS 861
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D + +T ++ D+ + H + V C + +QD + DR + +W
Sbjct: 862 YDMKIK----VTDLQG-DLTKQLPIMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLW 915
Score = 45 (20.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLAT-TQD 361
H V ++ + YLL+ D +I++ D++ + V K IQ TQD
Sbjct: 841 HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQD 900
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 56/195 (28%), Positives = 93/195 (47%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHE-- 99
H GS++S+ VD T ++ SG+ D + ++ TD E A +R K +
Sbjct: 176 HAGSVDSVAVDCTRTKFC-SGSWDKMLKIWSAV-PTDEEDEMEEAANRPR-KKQKTEQLG 232
Query: 100 ---------HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYR 150
GH AISS +W D + S+DH +K+WD T + + KV+
Sbjct: 233 LTRTPLATLSGHTEAISSVLWS--DAEEICSASWDHTIKLWDAE-TGGLKSTLTGNKVFN 289
Query: 151 T-AMSPLAASHMLIAAGTEDVQVRLCDIAS--GA-ISQTLSGHRDGIMTVEWSTSSEWIL 206
+ + SPL +A+G+ D +RL D S G+ + +L+ H + +V+WS + E L
Sbjct: 290 SVSYSPLCRR---LASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQL 346
Query: 207 VTGGCDGAIRFWDIR 221
++G D ++ WD R
Sbjct: 347 ISGSLDNIVKLWDTR 361
>MGI|MGI:2139593 [details] [associations]
symbol:Wdr47 "WD repeat domain 47" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:2139593 GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0005874 EMBL:AL683823 EMBL:CH466607 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
CTD:22911 HOGENOM:HOG000231412 HOVERGEN:HBG058798 EMBL:AK122397
EMBL:BC040337 IPI:IPI00330193 RefSeq:NP_852065.2 UniGene:Mm.285968
ProteinModelPortal:Q8CGF6 SMR:Q8CGF6 DIP:DIP-58945N
PhosphoSite:Q8CGF6 PaxDb:Q8CGF6 PRIDE:Q8CGF6
Ensembl:ENSMUST00000051145 GeneID:99512 KEGG:mmu:99512
InParanoid:A2AGC7 OMA:RVCAYPD OrthoDB:EOG4640B8 NextBio:353995
Bgee:Q8CGF6 CleanEx:MM_WDR47 Genevestigator:Q8CGF6
GermOnline:ENSMUSG00000040389 Uniprot:Q8CGF6
Length = 920
Score = 165 (63.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 49/142 (34%), Positives = 68/142 (47%)
Query: 96 KQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVW----DT-NCTRVVMNFKM-PGKVY 149
K+++H HK +I W P L TGS D YVKV +T N T + F M G +
Sbjct: 656 KRNKH-HKGSIYCVAWSPCGQ-LLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIR 713
Query: 150 RTAM--SPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILV 207
A P + +LI+AG D + D G LSGH I+ + T S W++
Sbjct: 714 DLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALY--TWSGWMIA 771
Query: 208 TGGCDGAIRFWDIRRAGCFRVL 229
+G D +RFWD+R C RV+
Sbjct: 772 SGSQDKTVRFWDLRVPSCVRVV 793
Score = 54 (24.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 25/119 (21%), Positives = 44/119 (36%)
Query: 306 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLV------NFETVRLQTSKPIQLATT 359
AV + V G L + DS L+D+ GR + +VR L +
Sbjct: 803 AVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGS 862
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D + +T ++ D+ + H + V C + +QD + DR + +W
Sbjct: 863 YDMKIK----VTDLQG-DLTKQLPLMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLW 916
Score = 45 (20.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLAT-TQD 361
H V ++ + YLL+ D +I++ D++ + V K IQ TQD
Sbjct: 842 HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPLMVVGEHKDKVIQCRWHTQD 901
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 52/186 (27%), Positives = 93/186 (50%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H+ I SL ++ R+++SG+ D ++D++ K + F + + E G
Sbjct: 368 HELDIYSLDYS-SDGRFIVSGSGDKKAKIWDIE------------KGKCAFTLGNE-EVG 413
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-GKVYRTAMSPLAASH 160
K ++S P D L GS D+ V++WD + ++ VY A SP S
Sbjct: 414 PKNGVTSVAMSP-DGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKS- 471
Query: 161 MLIAAGTEDVQVRLCDIASGAISQ-----TLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215
+A+G+ D ++L D+ SG+ S+ T +GH+D +++V +S W L++G D ++
Sbjct: 472 --LASGSLDKSLKLWDL-SGSRSRSRCRATFNGHKDFVLSVAFSPDGSW-LISGSKDRSV 527
Query: 216 RFWDIR 221
+FWD R
Sbjct: 528 QFWDPR 533
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 52/168 (30%), Positives = 78/168 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
YL +GA D +V V+D+ H K + F +GH+ I S + Y D
Sbjct: 341 YLATGAEDKTVKVWDI----------HTKKIQHTF-------YGHELDIYS-LDYSSDGR 382
Query: 118 LFVTGSYDHYVKVWDTN---CTRVVMNFKMPGK--VYRTAMSPLAASHMLIAAGTEDVQV 172
V+GS D K+WD C + N ++ K V AMSP L+AAG+ D V
Sbjct: 383 FIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSP---DGRLVAAGSLDNIV 439
Query: 173 RLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
RL D +G + GH D + +V +S + L +G D +++ WD+
Sbjct: 440 RLWDAQTGYFLERYEGHLDSVYSVAFSPDGK-SLASGSLDKSLKLWDL 486
Score = 102 (41.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 307 VTGLKVTEDGMYLLSAGS-DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVV 365
VT + ++ DG L++AGS D+ +RLWD ++G L +E +A + D +
Sbjct: 418 VTSVAMSPDGR-LVAAGSLDNIVRLWDAQTGY-FLERYEG---HLDSVYSVAFSPDGKSL 472
Query: 366 FVPCMT-AVKAFDIWSGKT---C-LTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCP 420
+ ++K +D+ ++ C TF GH ++V FS L +G DR + W P
Sbjct: 473 ASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDP 532
Score = 102 (41.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 32/136 (23%), Positives = 61/136 (44%)
Query: 94 VDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNF----KMPGKVY 149
+D H H ++ + + D TG + +++D + + V F + G +Y
Sbjct: 272 IDLLHNLQHN-SVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLY 329
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTG 209
++ + +A G ED V++ DI + I T GH I ++++S+ +I V+G
Sbjct: 330 IRSVC-FSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFI-VSG 387
Query: 210 GCDGAIRFWDIRRAGC 225
D + WDI + C
Sbjct: 388 SGDKKAKIWDIEKGKC 403
Score = 83 (34.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 38/160 (23%), Positives = 63/160 (39%)
Query: 267 NG-NGVRQSSVGRIPAKGSVRQ--RLHPGMLSS-QDRATAHYGAVTGLKVTEDGMYLLSA 322
NG V S GR+ A GS+ RL +R H +V + + DG L S
Sbjct: 416 NGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASG 475
Query: 323 GSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT-AVKAFDIWSG 381
D ++LWD+ R+ T + +A + D + + +V+ +D +G
Sbjct: 476 SLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535
Query: 382 KTCLTFRGHYEYVNCCCFSSQDQE---LYTGGNDRQILVW 418
T + +GH V S ++ TG D + +W
Sbjct: 536 TTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH + ++P ++ TGS D V++W T N R+ + G V A SP
Sbjct: 420 GHLADVDCVKFHP-NSNYLATGSTDKTVRLWSTQQGNSVRLFTGHR--GPVLSLAFSP-- 474
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
L +AG ED +++L D+ASG + + L GH D I ++ +S S ++ + D ++R
Sbjct: 475 NGKYLASAG-EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSS-LVASASMDNSVRV 532
Query: 218 WDIRRAGCFRVLDQSQSQL 236
WDIR + C D S S+L
Sbjct: 533 WDIRSSHCSTPADGSSSEL 551
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 152 (58.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 38/137 (27%), Positives = 69/137 (50%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH +++S + Y TGL VT S D ++ WD +C R++ ++ ++
Sbjct: 345 GHLASVNS-VQYSSKTGLIVTASSDRTLRTWDITTGHCIRII-------HAHQRGIACAQ 396
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ I +G+ D+ +R+ + +SG + + L GH D I TV ++ +V+GG DG +R
Sbjct: 397 YNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEK---IVSGGYDGTVRI 453
Query: 218 WDIRRAGCFRVLDQSQS 234
W+ VL S++
Sbjct: 454 WNFNTGEQHCVLHNSRN 470
Score = 60 (26.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 42 HKGSINSLQVDLTEERYLL-SGASDSSVAVYDVQ 74
H GS+ L +D R LL SG+SDS++ ++D Q
Sbjct: 260 HSGSV--LCLDFCRRRNLLVSGSSDSTIIIWDWQ 291
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 132 (51.5 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 101 GHKYAISSAIWYPVDTG--LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH ++S YP G L TGS D VK+WD + F+ +V +
Sbjct: 149 GHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFND--T 204
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S +I+ G ++ +++ D+ ++ T+ GH D + + S+ ++L + D +R W
Sbjct: 205 SDQIISGGIDN-DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVW 262
Query: 219 DIR 221
D+R
Sbjct: 263 DVR 265
Score = 125 (49.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAAS 159
GH A+ + Y D + + S D V VWD+ V K G + + P
Sbjct: 107 GHSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRG 163
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L+ G++D V+L DI A QT ++ V ++ +S+ I ++GG D I+ WD
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQI-ISGGIDNDIKVWD 221
Query: 220 IRR 222
+R+
Sbjct: 222 LRQ 224
Score = 90 (36.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 33/159 (20%), Positives = 63/159 (39%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ + ++P + L G +D + +W+ +C G V +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAG-FDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--TD 120
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
ML +A T D V + D +G + L GH + + + ++ TG DG ++ W
Sbjct: 121 GSMLFSAST-DKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 179
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVK 257
DIR+ + + L + +S G ++ +K
Sbjct: 180 DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 218
Score = 86 (35.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDV 333
H +VTGL ++ +G YLLS D+ +R+WDV
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 68 (29.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
++S G D+ I++WD+ + T T+R L+ + + + + M V+ +D
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTY----TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263
Query: 378 I--WSGKT-CLT-FRG--HYEYVNC--CCFSSQDQELYTGGNDRQILVW-CPSRHI 424
+ ++ K C+ F+G H N C +S ++ G DR + VW SR I
Sbjct: 264 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI 319
Score = 53 (23.7 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
NY + H G++ L + T+ L S ++D +VAV+D
Sbjct: 101 NYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWD 137
Score = 39 (18.8 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGR 337
DG + + +D + +WD S R
Sbjct: 296 DGSKIAAGSADRFVYVWDTTSRR 318
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 116 (45.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 46/200 (23%), Positives = 89/200 (44%)
Query: 29 TLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKH 88
TLQL ++ H G + + + + ++S + D ++ V+ + R D G
Sbjct: 4 TLQLRG--TLIG-HNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYG------ 54
Query: 89 RSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK- 147
++ +GH + IS + D ++GS+D +++WD + F+ K
Sbjct: 55 -----YPQKRLYGHSHFISDVV-LSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKD 108
Query: 148 VYRTAMSPLAASHMLIAAGTEDVQVRLCD-IASGAISQTLSGHRDGIMTVEWSTS-SEWI 205
V A S A + I +G+ D ++L + +A + GH D + V +S + S I
Sbjct: 109 VLSVAFS---ADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPI 165
Query: 206 LVTGGCDGAIRFWDIRRAGC 225
+V+ G D ++ W++ A C
Sbjct: 166 IVSCGWDRTVKVWNL--ANC 183
Score = 92 (37.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRN--TLVNFETVRLQTSKPIQ--LAT 358
H G + + V+ DG S G DS+ LWD+ G+N TL + + + P + L
Sbjct: 192 HNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCV 251
Query: 359 TQDPAVVF--VPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQIL 416
P++ + C V+ ++ T + +S+ Q L+ G +D I
Sbjct: 252 AYGPSIKIWDLACKKTVE--ELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIR 309
Query: 417 VW 418
VW
Sbjct: 310 VW 311
Score = 50 (22.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 287 QRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDV 333
+ L P ++S +A L + DG L + SD+ IR+W V
Sbjct: 269 EELRPEVVSPTSKADQPQ--CLSLAWSTDGQTLFAGYSDNTIRVWQV 313
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 56/195 (28%), Positives = 90/195 (46%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHE-- 99
H GS++S+ VD T R+ SG+ D + ++ TD E + +R K +
Sbjct: 188 HAGSVDSIAVDSTGTRFC-SGSWDKMLKIWSTV-PTDEEDEMEESTNRPR-KKQKTEQLG 244
Query: 100 ---------HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYR 150
GHK AISS +W D + S+DH + VWD + KV+
Sbjct: 245 LTRTPIVTLSGHKEAISSVLWS--DAEEICSASWDHTIGVWDVESGSLKSTLT-GNKVFN 301
Query: 151 T-AMSPLAASHMLIAAGTEDVQVRLCD--IASGA-ISQTLSGHRDGIMTVEWSTSSEWIL 206
+ SPL +A+G+ D +RL D G+ +S +L+ H + +V+WS + E L
Sbjct: 302 CISYSPLCKR---LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQL 358
Query: 207 VTGGCDGAIRFWDIR 221
++G D ++ WD R
Sbjct: 359 ISGSLDNIVKLWDTR 373
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 84/397 (21%), Positives = 157/397 (39%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H ++ S+ T +YL SG+ D++V +D+ T + F G
Sbjct: 64 HSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPH------------FTCQ-----G 105
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMS--PLAAS 159
H++ + S W P D +G + + +WD + + V + T +S PL A+
Sbjct: 106 HRHWVLSISWSP-DGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHAN 164
Query: 160 H--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+A+ ++D VR+ D +G + L+GH + + W + +L + D I+
Sbjct: 165 PECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKV 222
Query: 218 WDIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRA-PQKRSANGNGVRQSSV 276
W R L Q L +L G + Q + ++ ++
Sbjct: 223 WRAHDGVLCRTL-QGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRAL 281
Query: 277 GRIP-AKGSVRQRLHPG-------MLS-SQD-----RATAHYGAVTGLKVTEDGMYLLSA 322
R +G +RL G M S ++D R T H + + + D + SA
Sbjct: 282 RRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASA 341
Query: 323 GSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSG 381
D I+LWD +G+ ++R + Q+A + D ++ + +K +D+ +
Sbjct: 342 SFDKSIKLWDGRTGKY----LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 397
Query: 382 KTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K GH + V +S Q + +GG D+ + +W
Sbjct: 398 KLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 85/346 (24%), Positives = 145/346 (41%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
GH A+ S + P TG ++ +GS D V+ WD + +F G + +
Sbjct: 63 GHSEAVISVAFSP--TGKYLASGSGDTTVRFWDLSTE--TPHFTCQGHRHWVLSISWSPD 118
Query: 160 HMLIAAGTEDVQVRLCDIASGA-ISQTLSGHRDGIMTVEWS---TSSEW-ILVTGGCDGA 214
+A+G ++ Q+ L D ++G + + L+GH I + W + E + + DG+
Sbjct: 119 GKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGS 178
Query: 215 IRFWDIRRAGCFRVLD-QSQSQLGRR---PPLLKRKSLSAGQNSSVKP-RAPQK---RSA 266
+R WD C R+L +QS R LL SA Q+ ++K RA R+
Sbjct: 179 VRVWDTTAGRCERILTGHTQSVTCLRWGGDGLL----YSASQDRTIKVWRAHDGVLCRTL 234
Query: 267 NGNG--VRQSSV--------GRI-PAKGSVR-QRLHPGMLSSQDRATAHYGAVTGLKVTE 314
G+G V ++ G PA+ S+ Q L + +DRA Y V G
Sbjct: 235 QGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRG----- 289
Query: 315 DGMYLLSAGSDS-RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT-A 372
G L +GSD + +W + L + + Q+ + D ++ +
Sbjct: 290 QGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALIN---QVLFSPDSRIIASASFDKS 346
Query: 373 VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+K +D +GK + RGH V +S+ + L +G +D + VW
Sbjct: 347 IKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 392
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 165 (63.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 46/172 (26%), Positives = 81/172 (47%)
Query: 55 EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV 114
+E YLLSG+ D + ++DV AT + + ++FV + GH+ AI+ W+
Sbjct: 180 KEGYLLSGSQDQKICLWDVS-ATPQD---KVLN--AMFVYE-----GHESAIADVSWHMK 228
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTEDVQVR 173
+ LF + D + +WDT ++ K+ + V + +P + ++A + D V
Sbjct: 229 NENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPF--NEWVLATASSDSTVA 286
Query: 174 LCDIAS-GAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ A +S H + VEW + E +L + G D + WD+ R G
Sbjct: 287 LFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVG 338
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 118 (46.6 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 101 GHKYAISSAIWYPVDTG--LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH ++S +P G L TGS D VK+WD V F+ +V +
Sbjct: 139 GHTSFVNSC--FPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFND--T 194
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S +I+ G ++ +++ D+ + ++ GH D + + S ++L + D ++R W
Sbjct: 195 SDQIISGGIDN-DIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL-SNSMDNSVRVW 252
Query: 219 DIR 221
DIR
Sbjct: 253 DIR 255
Score = 116 (45.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 34/122 (27%), Positives = 54/122 (44%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH A+ + Y D L + S D V VWD+ V K + P
Sbjct: 97 GHSGAVME-LHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCF-PARRGP 154
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L G++D V+L DI A T +++V ++ +S+ I ++GG D I+ WD+
Sbjct: 155 QLACTGSDDGTVKLWDIRKKASVHTFQNTYQ-VLSVTFNDTSDQI-ISGGIDNDIKVWDL 212
Query: 221 RR 222
R+
Sbjct: 213 RQ 214
Score = 92 (37.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 28/120 (23%), Positives = 55/120 (45%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNTLVNFETVRLQTSKPIQLATTQ 360
H +VTGL ++ DG YLLS D+ +R+WD+ + + V + + L +
Sbjct: 224 HGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSW 283
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTC-LTFR--GHYEYVNCCCFSSQDQELYTGGNDRQILV 417
+ +A + IW T + ++ GH VN F ++ + +G +D+++ +
Sbjct: 284 SADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
Score = 83 (34.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/124 (23%), Positives = 51/124 (41%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ + ++P L +G YD + +W+ +C G V +
Sbjct: 54 GHEGEVYCCKFHPNGATLASSG-YDRLILMWNVYGDCENYATLKGHSGAVMELHYN--TD 110
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+L +A T D V + D +G + L GH + + + + TG DG ++ W
Sbjct: 111 GSLLFSAST-DKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLW 169
Query: 219 DIRR 222
DIR+
Sbjct: 170 DIRK 173
Score = 62 (26.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 26/109 (23%), Positives = 54/109 (49%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
++S G D+ I++WD+ +N L+ +++ L+ + D + + M +V+ +D
Sbjct: 198 IISGGIDNDIKVWDLR--QNKLIY--SMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD 253
Query: 378 I--WSGKT-CLT-FRG--HYEYVNC--CCFSSQDQELYTGGNDRQILVW 418
I ++ K C+ F+G H N C +S+ ++ G DR + +W
Sbjct: 254 IRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIW 302
Score = 49 (22.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
NY + H G++ L + T+ L S ++D +V V+D
Sbjct: 91 NYATLKG-HSGAVMELHYN-TDGSLLFSASTDKTVCVWD 127
Score = 39 (18.8 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
H G+V + + +LS SD R+ + +++
Sbjct: 316 HAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ 347
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 111 (44.1 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 28/111 (25%), Positives = 51/111 (45%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDI 378
+ +A SD+ +R+WD+ + +TL+ V + + + + T +K D+
Sbjct: 201 IATASSDNTVRVWDIRT--HTLLQHYQVHSAAVNALSFHPSGNHLLTASSDST-LKILDL 257
Query: 379 WSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHISDGVD 429
G+ T GH +C FS + + G+D+Q++VW R D VD
Sbjct: 258 LEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW---RTNFDSVD 305
Score = 89 (36.4 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 30/121 (24%), Positives = 52/121 (42%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAASH 160
H ++ S + + D +T S D +K+W + +++ + R A SP
Sbjct: 101 HTGSVRS-VCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSP---DG 156
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L+ + ++D V+L D +S + T V++ SS I T D +R WDI
Sbjct: 157 QLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCI-ATASSDNTVRVWDI 215
Query: 221 R 221
R
Sbjct: 216 R 216
Score = 81 (33.6 bits), Expect = 0.00090, Sum P(2) = 0.00089
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLA--TT 359
AH G+V + + DG LL+A D I+LW V R ++ T+R + + ++ A +
Sbjct: 100 AHTGSVRSVCFSADGQSLLTASDDQSIKLWSVH--RQKIIC--TLR-EHNNWVRCARFSP 154
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTF---RGHYEYVNCCCFSSQDQELYTGGNDRQIL 416
+V V VK +D S + TF G+ YV+ F + T +D +
Sbjct: 155 DGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVD---FHPSSTCIATASSDNTVR 211
Query: 417 VW 418
VW
Sbjct: 212 VW 213
Score = 79 (32.9 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 147 KVYRTAMSPL--AASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEW 204
K +R A++ L + S IA+G+ D V + ++ + + +GH+D + V++S S+
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAH- 73
Query: 205 ILVTGGCDGAIRFW 218
+L + D +R W
Sbjct: 74 LLASSSRDKTVRLW 87
Score = 65 (27.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR 337
H AV L G +LL+A SDS +++ D+ GR
Sbjct: 227 HSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGR 261
Score = 49 (22.3 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 13/44 (29%), Positives = 27/44 (61%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQ-RATDYEGGGH 84
H+ +I SL + ++ + SG+ D+SV V++++ ++ Y GH
Sbjct: 17 HRDAITSLDFSPSGKQ-IASGSVDASVMVWNMKPQSRAYRFTGH 59
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 134 (52.2 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 28/109 (25%), Positives = 52/109 (47%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174
D T S D VK+WD+ ++V ++ + ++H+L+A G+ D ++L
Sbjct: 668 DDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKL 727
Query: 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
D+ T+ GH + + +S E +L + DG ++ WD+R A
Sbjct: 728 WDLNQKECRNTMFGHTNSVTHCRFSPDDE-LLASCSADGTLKLWDVRSA 775
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H AV ++DG + S G+D ++++ E+G L ++ + + A + D
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL----DIKAHEDEVLCCAFSSDD 669
Query: 363 AVVFVPCMT--AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELY--TGGNDRQILVW 418
+ + C VK +D +GK T+ H E VNCC F+++ L TG ND + +W
Sbjct: 670 SYI-ATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLW 728
Score = 87 (35.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 38/129 (29%), Positives = 57/129 (44%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD 361
AH V ++ D LLS D +++W+V +GR +F T T + A + D
Sbjct: 1042 AHQETVKDFRLLRDSR-LLSWSFDGTVKVWNVITGRIER-DF-TCHQGTV--LSCAISSD 1096
Query: 362 PAVVFVPCMTAVKAFDIWSGKT---CLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
A F +A K IWS + +GH V C FS L TG ++ +I +W
Sbjct: 1097 -ATKF-SSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIW 1154
Query: 419 CPSRHISDG 427
++SDG
Sbjct: 1155 ----NVSDG 1159
Score = 84 (34.6 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 28/116 (24%), Positives = 51/116 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H AV ++ T DG L+S+ DS I++W+ ++ F +T K +L +D
Sbjct: 1002 HKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYV---FLQAHQETVKDFRLL--RDS 1056
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
++ VK +++ +G+ F H V C SS + + D+ +W
Sbjct: 1057 RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Score = 78 (32.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 32/133 (24%), Positives = 56/133 (42%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V G+ + DG L+A D IR+W+ R N V Q I + ++
Sbjct: 881 HLSWVHGVMFSPDGSSFLTASDDQTIRVWET---RKVCKNSAIVLKQE---IDVVFQENE 934
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEY-----VNCCCFSSQDQELYTGGNDRQI-L 416
+V + ++ + +GKT G +Y V+CCC S + + G + I +
Sbjct: 935 MMVLA--VDNIRGLQLIAGKT-----GQIDYLPEAQVSCCCLSPHLEYVAFGDEEGAIKI 987
Query: 417 VWCPSRHI-SDGV 428
+ P+ + S G+
Sbjct: 988 IELPNNRVFSSGI 1000
Score = 62 (26.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 29/125 (23%), Positives = 49/125 (39%)
Query: 294 LSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKP 353
LSS+D V + DG ++ A + ++ L D+ + L T T +
Sbjct: 788 LSSEDPPEDVEVIVKCCSWSADGDRIIVAAKN-KVLLLDIHTS-GLLTEIHTGHHSTIQY 845
Query: 354 IQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDR 413
+ AV+ + V+ ++I S RGH +V+ FS T +D+
Sbjct: 846 CDFSPYDHLAVIALS-QYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQ 904
Query: 414 QILVW 418
I VW
Sbjct: 905 TIRVW 909
Score = 53 (23.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 287 QRLHP-GMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNT 339
Q LH +S ++ H G VT + + D L+SAG ++ W+V +G ++
Sbjct: 1160 QLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSAGG--YLKWWNVVTGESS 1211
Score = 52 (23.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
T H G V ++ D S +D ++W E
Sbjct: 1082 TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFE 1115
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 315 DGMYLLSAGSDS-RIRLWDVESGR 337
DG+ LL+ G D+ IR+W+V G+
Sbjct: 1138 DGI-LLATGDDNGEIRIWNVSDGQ 1160
Score = 44 (20.5 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 372 AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
A+K ++ + + + GH + V F++ + L + D I VW
Sbjct: 984 AIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVW 1030
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 114 (45.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H G ++ G + +AG+D +++WDV R L+ V + + +
Sbjct: 187 HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNR--LLQHYQVHTAAVNSLSFHPSGNY 244
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ T +K D+ G+ T GH C FS +GG+D Q++VW
Sbjct: 245 LITASNDST-LKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 92 (37.4 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 33/128 (25%), Positives = 56/128 (43%)
Query: 96 KQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT-RVVMNFKMPGKVYRTAMS 154
++H GH+ AI+S + + ++ +GS D +K+W R V S
Sbjct: 13 ERHFRGHRDAITS-VDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P + H L+A+G+ D V L + S H + +V +S+ + LVT D
Sbjct: 72 P--SGH-LVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQ-SLVTASDDKT 127
Query: 215 IRFWDIRR 222
I+ W + R
Sbjct: 128 IKVWTVHR 135
Score = 67 (28.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR---RAGC 225
++ + GHRD I +V++S + + L +G D ++ W ++ RA C
Sbjct: 11 SLERHFRGHRDAITSVDFSLNKKQ-LASGSMDSCLKIWSMKPQMRAYC 57
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 162 (62.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 48/167 (28%), Positives = 77/167 (46%)
Query: 56 ERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115
E ++ S + D S+ ++D Q + GG R + K E H + S W V
Sbjct: 71 ECHVASSSGDGSIKIWDTQAPS----GG-----RPI----KSFEE-HTKEVYSVDWNLVT 116
Query: 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTEDVQVRL 174
F+TGS+D +K+W+ R + F+ +Y SP A H L A+ + D +++
Sbjct: 117 KDTFITGSWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNA-H-LFASVSGDRTLKI 174
Query: 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
D T+ H I+T +W+ ++ +VTG D IR WDIR
Sbjct: 175 WDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIR 221
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 35/122 (28%), Positives = 54/122 (44%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H+Y I SAIW P + LF + S D +K+WD+ R + K T +
Sbjct: 146 HRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEILTC-DWNKYNDK 204
Query: 162 LIAAGTEDVQVRLCDIASGAISQT-LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+ G+ D +R+ DI T L GH + ++ S SE +L + D ++ WD
Sbjct: 205 EVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDR 264
Query: 221 RR 222
R
Sbjct: 265 AR 266
Score = 37 (18.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 323 GS-DSRIRLWDV 333
GS D IR+WD+
Sbjct: 209 GSVDKTIRIWDI 220
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 171 (65.3 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 63/250 (25%), Positives = 110/250 (44%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ A+ S + Y D+ L + S D VK+WDT + + + R+ + +
Sbjct: 294 GHEAAVLS-VSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVI--FSHDS 350
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L+A+ + D V++ D +G++ TL GHRD + +V +S S+ +L + D ++ WD
Sbjct: 351 RLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDT 408
Query: 221 RRAGCFRVLDQSQSQLGRRPPLLKRKS---LSAGQNSSVK----PRAPQKRSANGNG--V 271
L+ + + R + S SA +S+VK + + G+ V
Sbjct: 409 GTGSLQHTLEGHRDWV--RSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWV 466
Query: 272 RQ---SSVGRIPAKGSVRQ--RLHPGMLSSQDRAT-AHYGAVTGLKVTEDGMYLLSAGSD 325
R S R+ A S + R+ S H VT + + D L SA +D
Sbjct: 467 RSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASND 526
Query: 326 SRIRLWDVES 335
+R+WD+E+
Sbjct: 527 QTVRIWDIEA 536
Score = 150 (57.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 41/141 (29%), Positives = 69/141 (48%)
Query: 97 QHE-HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSP 155
QH GH+ + S I + D+ L + S D VK+WDT + + G +R +
Sbjct: 372 QHTLEGHRDWVRSVI-FSHDSQLLASASDDSTVKIWDTGTGS--LQHTLEG--HRDWVRS 426
Query: 156 LAASH--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDG 213
+ SH L+A+ ++D V++ D +G++ TL GHRD + +V +S S +L + D
Sbjct: 427 VIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSR-LLASASDDR 485
Query: 214 AIRFWDIRRAGCFRVLDQSQS 234
+R WD + L+ S
Sbjct: 486 TVRIWDTEKGSHKHTLEGHSS 506
Score = 143 (55.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 97 QHE-HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSP 155
QH GH + S I + D+ L + S D VK+WDT + + G +R +
Sbjct: 331 QHTLEGHSDLVRSVI-FSHDSRLLASAS-DSTVKIWDTGTGS--LQHTLEG--HRDWVRS 384
Query: 156 LAASH--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDG 213
+ SH L+A+ ++D V++ D +G++ TL GHRD + +V +S S+ +L + D
Sbjct: 385 VIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDS 443
Query: 214 AIRFWD 219
++ WD
Sbjct: 444 TVKIWD 449
Score = 135 (52.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 97 QHE-HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSP 155
QH GH+ + S I + D+ L + S D VK+WDT + + G +R +
Sbjct: 414 QHTLEGHRDWVRSVI-FSHDSQLLASASDDSTVKIWDTGTGS--LQHTLEG--HRDWVRS 468
Query: 156 LAASH--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDG 213
+ SH L+A+ ++D VR+ D G+ TL GH + +V +S S +L + D
Sbjct: 469 VIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSR-LLASASNDQ 527
Query: 214 AIRFWDI 220
+R WDI
Sbjct: 528 TVRIWDI 534
Score = 38 (18.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 47 NSLQVDLTEERYLLSGASD 65
+S+ VDL + YL++ A D
Sbjct: 73 DSVDVDLPTKDYLINEARD 91
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 157 (60.3 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 71/324 (21%), Positives = 125/324 (38%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ I+S ++P L V+ S D +KVWD K G +
Sbjct: 104 GHRNCINSVKFHP-SFSLMVSASEDATIKVWDFESGEFERTLK--GHTNAVQDIDFDKTG 160
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L+A+ + D+ ++L D + +TL GH + V ++ S + L++ D I+ W+
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQ-LISSSRDKTIKVWEA 219
Query: 221 RRAGCFRVLDQSQSQLGRRPPLLKRKSL--SAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
C + L + + R+ + + S S + ++K K S V
Sbjct: 220 ATGYCIKTLVGHEDWV-RKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVE 278
Query: 279 IPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR- 337
A + PG L S + G + YL + D I++W++ +GR
Sbjct: 279 CLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRC 338
Query: 338 -NTLVNFET-VRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFR-GHYEYV 394
T + + VR P ++ V ++ +DI G+ T H ++
Sbjct: 339 LATYIGHDNWVRAVRFHPC------GKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFI 392
Query: 395 NCCCFSSQDQELYTGGNDRQILVW 418
+C F + + TGG D I VW
Sbjct: 393 SCLDFCLHNPHIATGGVDDVIKVW 416
Score = 48 (22.0 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 10/39 (25%), Positives = 24/39 (61%)
Query: 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQ 74
K I++ H+ INS++ + ++S + D+++ V+D +
Sbjct: 99 KHILTGHRNCINSVKFHPSFS-LMVSASEDATIKVWDFE 136
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 163 (62.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 51/192 (26%), Positives = 87/192 (45%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDV---QRATDYEGGGHIAKHRSVFVVDKQH 98
H GS++++ VD T ++ SG+ D + ++ + + E K + +
Sbjct: 188 HAGSVDTIAVDPTRTKFC-SGSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTEQMGLTR 246
Query: 99 E-----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRT-A 152
GH A+SS +W D + S+DH +++WD T + KV+ +
Sbjct: 247 TPLMTLSGHNEAVSSVLWMDADE--LCSASWDHTIRLWDAE-TGGQKSTLSGSKVFNCIS 303
Query: 153 MSPLAASHMLIAAGTEDVQVRLCDIAS--GA-ISQTLSGHRDGIMTVEWSTSSEWILVTG 209
SPL +A+G+ D VRL D S G+ + +L+ H + V W+ S E LV+G
Sbjct: 304 YSPLCRR---LASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSG 360
Query: 210 GCDGAIRFWDIR 221
D ++ WD R
Sbjct: 361 SLDNVVKLWDTR 372
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 164 (62.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 89/346 (25%), Positives = 147/346 (42%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
GH A+ S + P TG ++ +GS D V+ WD + +F G + +
Sbjct: 112 GHSEAVISVAFSP--TGKYLASGSGDTTVRFWDLSTE--TPHFTCKGHRHWVLSISWSPD 167
Query: 160 HMLIAAGTEDVQVRLCDIASGA-ISQTLSGHRDGIMTVEWST---SSEWILVTGGC-DGA 214
+A+G ++ QV L D ++G + +TL+GH I + W + E V DG+
Sbjct: 168 GKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGS 227
Query: 215 IRFWDIRRAGCFRVLD-QSQSQLGRR---PPLLKRKSLSAGQNSSVKP-RAPQK---RSA 266
+R WD C R+L +QS R LL SA Q+ ++K RA R+
Sbjct: 228 VRVWDTTAGRCERILTGHTQSVTCLRWGGDGLL----YSASQDRTIKVWRAHDGVLCRTL 283
Query: 267 NGNG--VRQSSV--------GRI-PAKGSVR-QRLHPGMLSSQDRATAHYGAVTGLKVTE 314
G+G V ++ G PA+ +V Q L + ++RA++ Y V G
Sbjct: 284 QGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRG----- 338
Query: 315 DGMYLLSAGSDS-RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT-A 372
G L +GSD + LW + L + + Q+ + D +V +
Sbjct: 339 QGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALIN---QVLFSPDSRIVASASFDKS 395
Query: 373 VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+K +D +GK + RGH V +S+ + L +G +D + VW
Sbjct: 396 IKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Score = 158 (60.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 85/398 (21%), Positives = 158/398 (39%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H ++ S+ T +YL SG+ D++V +D+ T + F G
Sbjct: 113 HSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPH------------FTCK-----G 154
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMS--PLAA 158
H++ + S W P D +G + V +WD + T + + + G + T +S PL
Sbjct: 155 HRHWVLSISWSP-DGKKLASGCKNGQVLLWDPS-TGLQVGRTLTGHSKWITGLSWEPLHM 212
Query: 159 SH--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+ +A+ ++D VR+ D +G + L+GH + + W + +L + D I+
Sbjct: 213 NPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIK 270
Query: 217 FWDIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRA-PQKRSANGNGVRQSS 275
W R L Q L +L G + Q + +++ +
Sbjct: 271 VWRAHDGVLCRTL-QGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERA 329
Query: 276 VGRIP-AKGSVRQRLHPG------MLSS--QD-----RATAHYGAVTGLKVTEDGMYLLS 321
R +G +RL G L S +D R T H + + + D + S
Sbjct: 330 SSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVAS 389
Query: 322 AGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWS 380
A D I+LWD +G+ ++R + Q+A + D ++ + +K +D+ +
Sbjct: 390 ASFDKSIKLWDGRTGKY----LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 445
Query: 381 GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K GH + V +S Q + +GG D+ + +W
Sbjct: 446 QKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 164 (62.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 88/346 (25%), Positives = 147/346 (42%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
GH A+ S + P TG ++ +GS D V+ WD + +F G + +
Sbjct: 114 GHSEAVISVAFSP--TGKYLASGSGDTTVRFWDLSTE--TPHFTCKGHRHWVLSISWSPD 169
Query: 160 HMLIAAGTEDVQVRLCDIASGA-ISQTLSGHRDGIMTVEWST---SSEWILVTGGC-DGA 214
+A+G ++ Q+ L D ++G + +TL+GH I + W + E V DG+
Sbjct: 170 GKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGS 229
Query: 215 IRFWDIRRAGCFRVLD-QSQSQLGRR---PPLLKRKSLSAGQNSSVKP-RAPQK---RSA 266
+R WD C R+L +QS R LL SA Q+ ++K RA R+
Sbjct: 230 VRVWDTTAGRCERILTGHTQSVTCLRWGGDGLL----YSASQDRTIKVWRAHDGVLCRTL 285
Query: 267 NGNG--VRQSSV--------GRI-PAKGSVR-QRLHPGMLSSQDRATAHYGAVTGLKVTE 314
G+G V ++ G PA+ +V Q L + ++RA++ Y V G
Sbjct: 286 QGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRG----- 340
Query: 315 DGMYLLSAGSDS-RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT-A 372
G L +GSD + LW + L + + Q+ + D +V +
Sbjct: 341 QGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALIN---QVLFSPDSRIVASASFDKS 397
Query: 373 VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+K +D +GK + RGH V +S+ + L +G +D + VW
Sbjct: 398 IKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 443
Score = 156 (60.0 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 85/398 (21%), Positives = 157/398 (39%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H ++ S+ T +YL SG+ D++V +D+ T + F G
Sbjct: 115 HSEAVISVAFSPTG-KYLASGSGDTTVRFWDLSTETPH------------FTCK-----G 156
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNC-TRVVMNFKMPGKVYRTAMS--PLAA 158
H++ + S W P D +G + + +WD + T+V K + T +S PL
Sbjct: 157 HRHWVLSISWSP-DGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSK-WITGLSWEPLHM 214
Query: 159 SH--MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+ +A+ ++D VR+ D +G + L+GH + + W + +L + D I+
Sbjct: 215 NPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIK 272
Query: 217 FWDIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRA-PQKRSANGNGVRQSS 275
W R L Q L +L G + Q + +++ +
Sbjct: 273 VWRAHDGVLCRTL-QGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERA 331
Query: 276 VGRIP-AKGSVRQRLHPG------MLSS--QD-----RATAHYGAVTGLKVTEDGMYLLS 321
R +G +RL G L S +D R T H + + + D + S
Sbjct: 332 SSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVAS 391
Query: 322 AGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWS 380
A D I+LWD +G+ ++R + Q+A + D ++ + +K +D+ +
Sbjct: 392 ASFDKSIKLWDGRTGKY----LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 447
Query: 381 GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K GH + V +S Q + +GG D+ + +W
Sbjct: 448 QKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
>WB|WBGene00000773 [details] [associations]
symbol:cpf-1 species:6239 "Caenorhabditis elegans"
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040010 "positive regulation
of growth rate" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0040027 HOGENOM:HOG000234077 KO:K14406
GeneTree:ENSGT00700000104487 GO:GO:0001703 EMBL:Z68315 PIR:T21482
RefSeq:NP_495822.1 ProteinModelPortal:Q19864 SMR:Q19864
STRING:Q19864 PaxDb:Q19864 EnsemblMetazoa:F28C6.3 GeneID:174378
KEGG:cel:CELE_F28C6.3 UCSC:F28C6.3 CTD:174378 WormBase:F28C6.3
InParanoid:Q19864 OMA:TKFITTH NextBio:883778 Uniprot:Q19864
Length = 430
Score = 126 (49.4 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 50/199 (25%), Positives = 94/199 (47%)
Query: 33 SNYKEI-VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSV 91
S Y+ I ++ HK + + ++ + +G++D S+ + DV+R E +HR +
Sbjct: 98 SEYETIYLTVHKAPCRAAAFN-SDGSLVATGSADCSIKIMDVERILARE-----KEHREM 151
Query: 92 FV--VDKQHE-----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKM 144
D H + H +++ I++P D+ + ++GS D VK++D + T V K
Sbjct: 152 NENGPDAHHPVIRTLYDHVDDVNTVIFHPRDS-ILISGSNDKTVKLFDFSKTAVKKAMKT 210
Query: 145 PGKVYRT-AMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWST 200
+VY A+S L+ A T+ VRL +I + A + H + + V +S
Sbjct: 211 LSEVYPVRALSCHPGGEFLLVA-TDHPTVRLYNIETAQAYASANPDDQHTESVTDVHYSE 269
Query: 201 SSEWILVTGGCDGAIRFWD 219
++ + VT DG ++ WD
Sbjct: 270 NAR-LYVTASKDGHVKIWD 287
Score = 82 (33.9 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 302 AHYGA-VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLV 341
AH G+ + K T++G Y+L++G DS ++LW++ + R +V
Sbjct: 300 AHDGSSICSAKFTKNGKYILTSGMDSIVKLWELSTNRCLIV 340
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 165 (63.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 79/330 (23%), Positives = 134/330 (40%)
Query: 99 EHGHKYAISSAIW-YPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLA 157
+ H + +W +D TGS+D KVWDT + F + G Y + L
Sbjct: 225 KEAHLIGHTGTVWALHLDDERVYTGSFDKTAKVWDTKTKKC--RFTLAGHYY--PIQCLD 280
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLS--GHRDGIMTVEWSTSSEWILVTGGCDGAI 215
++ ++A G+ D +R+ D+ G L+ H + ++ +++G D +
Sbjct: 281 VNNNIMATGSLDNSIRIWDLEKGKSKGILTTRAHNFDVFCLQQIGDQ---IISGSSDSTV 337
Query: 216 RFWDIRRA--GCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQ 273
+ W+I + D + + + + + + P + + N V
Sbjct: 338 KVWNIAEIINDSIEIPDTEEEEEEALQDNVMNDPFAVNNSFTSLPDINEPDHVHTNIV-- 395
Query: 274 SSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDV 333
SV K S R R H LSS H VT L+V G L+S GSD +R+WD+
Sbjct: 396 -SVND---KTSTRYRNHN--LSST-HTFKHQSCVTCLQVY--GNILMSGGSDRVVRVWDL 446
Query: 334 ESGRNTLV---NFETVR-LQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCL-TFR 388
+ + + + E +R LQ + + L T D T V+ +D+ S + + T R
Sbjct: 447 NTSQPIQILSGHNEGIRALQFNGNV-LVTGSDD--------TTVRVWDLRSKNSNISTLR 497
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
GH V C + L TG ND+ + W
Sbjct: 498 GHNGSVRCLQWDGTT--LITGSNDQSVRWW 525
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 48/205 (23%), Positives = 90/205 (43%)
Query: 28 STLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYD-VQRATDYEGGGHIA 86
ST+++ N EI++ SI + EE L + AV + D H+
Sbjct: 335 STVKVWNIAEIIND---SIEIPDTEEEEEEALQDNVMNDPFAVNNSFTSLPDINEPDHV- 390
Query: 87 KHRSVFVV-DKQ----HEHG----HKYAISSAIW-YPVDTGLFVTGSYDHYVKVWDTNCT 136
H ++ V DK H H + S + V + ++G D V+VWD N +
Sbjct: 391 -HTNIVSVNDKTSTRYRNHNLSSTHTFKHQSCVTCLQVYGNILMSGGSDRVVRVWDLNTS 449
Query: 137 RVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS-GAISQTLSGHRDGIMT 195
+ + + G + + L + ++ G++D VR+ D+ S + TL GH +
Sbjct: 450 QPIQI--LSG--HNEGIRALQFNGNVLVTGSDDTTVRVWDLRSKNSNISTLRGHNGSVRC 505
Query: 196 VEWSTSSEWILVTGGCDGAIRFWDI 220
++W ++ L+TG D ++R+W++
Sbjct: 506 LQWDGTT---LITGSNDQSVRWWNL 527
>TAIR|locus:2180952 [details] [associations]
symbol:AT5G15550 "AT5G15550" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006606 "protein import into nucleus" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0051604
"protein maturation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 EMBL:AL391143
HSSP:P16649 GO:GO:0080008 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:DCTINLW EMBL:AY064011 EMBL:AY091257
IPI:IPI00525355 PIR:T51533 RefSeq:NP_197059.1 UniGene:At.27103
ProteinModelPortal:Q9LF27 SMR:Q9LF27 STRING:Q9LF27 PaxDb:Q9LF27
PRIDE:Q9LF27 EnsemblPlants:AT5G15550.1 GeneID:831408
KEGG:ath:AT5G15550 TAIR:At5g15550 InParanoid:Q9LF27
PhylomeDB:Q9LF27 ProtClustDB:CLSN2687473 ArrayExpress:Q9LF27
Genevestigator:Q9LF27 Uniprot:Q9LF27
Length = 433
Score = 163 (62.4 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 60/215 (27%), Positives = 94/215 (43%)
Query: 28 STLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAK 87
ST ++ YK I+ HK S+ S+ + + S + D ++ +++ +T EG K
Sbjct: 191 STTKVRAYK-ILRGHKASVQSVSAQKSGNM-VCSSSWDCTINLWNTNESTS-EGESVSVK 247
Query: 88 HR--SVFVVDKQHEH-------GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRV 138
R + + Q E GH +SS +W D + + S+DH V+ WD +
Sbjct: 248 KRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHD--VIYSSSWDHSVRRWDVETGKD 305
Query: 139 VMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL---SGHRDGIMT 195
+N GK T + S LIAAG D +R+ D S + S H I
Sbjct: 306 SLNL-FCGKALNT-VDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISA 363
Query: 196 VEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230
+W SS + L++ DG I WD+R A V+D
Sbjct: 364 CKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVID 398
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 154 (59.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H +SS + L TG D V +W N +M+ + G L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS--LTGHTSPVESVRLNTPEE 76
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
LI AG++ +R+ D+ + I +TL GH+ I ++++ E++ +G D I+ WDIR
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIR 135
Query: 222 RAGC-FRVLDQSQS 234
R GC FR SQ+
Sbjct: 136 RKGCVFRYRGHSQA 149
Score = 143 (55.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD V ++ + R SP
Sbjct: 103 GHKANICSLDFHPY--GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + GH + VE+ + E++L +G D IRFW
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFW 216
Query: 219 DIRRAGCFRVLDQSQSQLG 237
D+ + F+V+ + + G
Sbjct: 217 DLEK---FQVVSCIEGEPG 232
Score = 57 (25.1 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSR-IRLWDVESGRNTLVNFETVRLQTSKPIQLATT-- 359
H G V ++ YLL++GS R IR WD+E F+ V +P + +
Sbjct: 188 HTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEK-------FQVVSCIEGEPGPVRSVLF 239
Query: 360 -QDPAVVFVPCMTAVKAFDIWSGKTC 384
D ++ C +++ + W + C
Sbjct: 240 NPDGCCLYSGCQDSLRVYG-WEPERC 264
Score = 51 (23.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H + S++++ T E +++G+ S+ V+D++ A
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA 95
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 154 (59.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H +SS + L TG D V +W N +M+ + G L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS--LTGHTSPVESVRLNTPEE 76
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
LI AG++ +R+ D+ + I +TL GH+ I ++++ E++ +G D I+ WDIR
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIR 135
Query: 222 RAGC-FRVLDQSQS 234
R GC FR SQ+
Sbjct: 136 RKGCVFRYRGHSQA 149
Score = 143 (55.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD V ++ + R SP
Sbjct: 103 GHKANICSLDFHPY--GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + GH + VE+ + E++L +G D IRFW
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFW 216
Query: 219 DIRRAGCFRVLDQSQSQLG 237
D+ + F+V+ + + G
Sbjct: 217 DLEK---FQVVSCIEGEPG 232
Score = 57 (25.1 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSR-IRLWDVESGRNTLVNFETVRLQTSKPIQLATT-- 359
H G V ++ YLL++GS R IR WD+E F+ V +P + +
Sbjct: 188 HTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEK-------FQVVSCIEGEPGPVRSVLF 239
Query: 360 -QDPAVVFVPCMTAVKAFDIWSGKTC 384
D ++ C +++ + W + C
Sbjct: 240 NPDGCCLYSGCQDSLRVYG-WEPERC 264
Score = 51 (23.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H + S++++ T E +++G+ S+ V+D++ A
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA 95
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 154 (59.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H +SS + L TG D V +W N +M+ + G L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS--LTGHTSPVESVRLNTPEE 76
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
LI AG++ +R+ D+ + I +TL GH+ I ++++ E++ +G D I+ WDIR
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIR 135
Query: 222 RAGC-FRVLDQSQS 234
R GC FR SQ+
Sbjct: 136 RKGCVFRYRGHSQA 149
Score = 143 (55.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD V ++ + R SP
Sbjct: 103 GHKANICSLDFHPY--GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + GH + VE+ + E++L +G D IRFW
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFW 216
Query: 219 DIRRAGCFRVLDQSQSQLG 237
D+ + F+V+ + + G
Sbjct: 217 DLEK---FQVVSCIEGEPG 232
Score = 57 (25.1 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSR-IRLWDVESGRNTLVNFETVRLQTSKPIQLATT-- 359
H G V ++ YLL++GS R IR WD+E F+ V +P + +
Sbjct: 188 HTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEK-------FQVVSCIEGEPGPVRSVLF 239
Query: 360 -QDPAVVFVPCMTAVKAFDIWSGKTC 384
D ++ C +++ + W + C
Sbjct: 240 NPDGCCLYSGCQDSLRVYG-WEPERC 264
Score = 51 (23.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H + S++++ T E +++G+ S+ V+D++ A
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA 95
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 150 (57.9 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 55/238 (23%), Positives = 104/238 (43%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVW---DTNCTRVVMNFKMPGKVYRTAMSPLA 157
GH +SS + P+ T L V+GS+D V++W D C R++ P + ++S
Sbjct: 136 GHTNYVSSIDFNPLGT-LLVSGSWDETVRIWNLQDGTCLRMLPAHSEP--IISVSIS--- 189
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRD-GIMTVEWSTSSEWILVTGGCDGAIR 216
A L A + D R+ D+ SG +TL + + ++++ + +++LV+ + IR
Sbjct: 190 ADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSN-LNSQIR 248
Query: 217 FWDIRRAGCFRVLDQS-QSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSS 275
WD RR R+ D ++ K++ +N+ P + +
Sbjct: 249 LWDYRRNRVVRIFDSHVNTRYSMSWDCYSSKNIP--KNTEALPNNDSSYPDDAESFMHDA 306
Query: 276 VGRIPAKGSVRQRLHPGMLSSQDRATAHYG--AVTGLKVTEDGMYLLSAGSDSRIRLW 331
IP++ Q P D + H + L VT G +++++G+D +R+W
Sbjct: 307 YLLIPSEDGTIQITDPSTKIIIDDSIRHSDDPETSLLNVTSLGPFIITSGTDPYVRVW 364
Score = 105 (42.0 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 27/129 (20%), Positives = 58/129 (44%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ +++ P + T S D +K+W R + + G + A
Sbjct: 52 GHEKSVTCVSVSP-NKRWIATSSSDGTIKIWSALTFR--LECTLFGHYRGISQVKWATGS 108
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+A+ ++D +R+ D + L GH + + +++++ +LV+G D +R W++
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGT-LLVSGSWDETVRIWNL 167
Query: 221 RRAGCFRVL 229
+ C R+L
Sbjct: 168 QDGTCLRML 176
Score = 73 (30.8 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 27/108 (25%), Positives = 50/108 (46%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH + + ++ DG +A D R+WDV SG+ TLV E + + S L T
Sbjct: 178 AHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLV--EPINVPLSN---LQFT 232
Query: 360 QDPAVVFVPCMTA-VKAFDIWSGKTCLTFRGHYE--Y-VNCCCFSSQD 403
++ + V + + ++ +D + F H Y ++ C+SS++
Sbjct: 233 ENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSWDCYSSKN 280
Score = 46 (21.3 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 406 LYTGGNDRQILVWCPS----RHISDG 427
+ T G D + VW PS +H DG
Sbjct: 352 IITSGTDPYVRVWAPSLLLSKHEKDG 377
Score = 43 (20.2 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 54 TEERYLLSGASDSSVAVYDVQR 75
T +YL S + D ++ ++D ++
Sbjct: 106 TGSKYLASASDDKTIRIWDFEK 127
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 119 (46.9 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 40/123 (32%), Positives = 64/123 (52%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT-NCTRVVMNFKMPG-KVYRTAMSPLA 157
+GHK A++ A+ Y G V+GS D V VWD N + + +++ G K T + L
Sbjct: 103 NGHKAAVT-ALQYDQLGGRLVSGSKDTDVIVWDVINESGL---YRLKGHKDAVTQVLFLK 158
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
++L+ +G +D V+ D+ + +TL GHR + + S E L+TG D +R
Sbjct: 159 EKNLLVTSG-KDTLVKWWDLDTQHCFKTLVGHRTEVWGMAL-VSEEKRLITGTADSELRV 216
Query: 218 WDI 220
WDI
Sbjct: 217 WDI 219
Score = 107 (42.7 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 28/119 (23%), Positives = 57/119 (47%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ + + + + D ++G+ + VK+W+ + + + Y +
Sbjct: 408 GHRSDVRT-LAFSSDNIAVLSGAAES-VKIWNRSTLQCIRTMDCE---YALCSLFVPGDR 462
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+I GT+ +++L D+ASG + +TL+ H + ++ S VTGG D ++FWD
Sbjct: 463 QVIV-GTKTGKLQLYDLASGTLMETLNAHDGAVWSIALSPDQRGF-VTGGADKCVKFWD 519
Score = 106 (42.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 34/134 (25%), Positives = 64/134 (47%)
Query: 127 YVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL 186
+V VWD V+ K G + + + P + + +A G ED +R+ + SG S
Sbjct: 46 HVFVWDARKGEKVLILK--GSKHESCLRP-SPDGLHLAVGYEDGSIRIFSLLSGEASVAF 102
Query: 187 SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD-IRRAGCFRVLDQSQSQLGRRPPLLKR 245
+GH+ + +++ LV+G D + WD I +G +R+ + + LK
Sbjct: 103 NGHKAAVTALQYDQLGGR-LVSGSKDTDVIVWDVINESGLYRL--KGHKDAVTQVLFLKE 159
Query: 246 KSL--SAGQNSSVK 257
K+L ++G+++ VK
Sbjct: 160 KNLLVTSGKDTLVK 173
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 45/160 (28%), Positives = 66/160 (41%)
Query: 270 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIR 329
G RQ VG K + L G L + AH GAV + ++ D ++ G+D ++
Sbjct: 460 GDRQVIVGTKTGKLQLYD-LASGTL--METLNAHDGAVWSIALSPDQRGFVTGGADKCVK 516
Query: 330 LWDVE-----SGRNTLVNFETVR-LQTSKPIQLATTQDP-----AVVFVPCMTAVKAFDI 378
WD E S ++ + VR LQ + + L P AV + C VK F
Sbjct: 517 FWDFELVKDESSIQKRLSMKQVRILQLDEDV-LCVRYSPNQKLLAVSLLDC--TVKVFYT 573
Query: 379 WSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ K L+ GH V C S + TG DR + +W
Sbjct: 574 DTLKFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIW 613
Score = 98 (39.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
+ +G++D V + D+ + + L GH+D + V + +LVT G D +++WD+
Sbjct: 121 LVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKN-LLVTSGKDTLVKWWDLDT 179
Query: 223 AGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSS 255
CF+ L ++++ + + K L G S
Sbjct: 180 QHCFKTLVGHRTEVWGMALVSEEKRLITGTADS 212
Score = 71 (30.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 27/94 (28%), Positives = 43/94 (45%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD-YEGGGHI-AKHRSVFVVDKQH- 98
HK ++ +LQ D R L+SG+ D+ V V+DV + Y GH A + +F+ +K
Sbjct: 105 HKAAVTALQYDQLGGR-LVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLL 163
Query: 99 -EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVW 131
G + W+ +DT H +VW
Sbjct: 164 VTSGKDTLVK---WWDLDTQHCFKTLVGHRTEVW 194
Score = 68 (29.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230
T+ GHR + T+ +S+ + I V G +++ W+ C R +D
Sbjct: 405 TIGGHRSDVRTLAFSSDN--IAVLSGAAESVKIWNRSTLQCIRTMD 448
Score = 65 (27.9 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 23/120 (19%), Positives = 49/120 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG---RNTLVNFETVR-LQTSKPIQLAT 358
H V + ++ DG + + +D +++W ++ G R+ + ++V LQ L
Sbjct: 585 HKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFF 644
Query: 359 TQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
T +K +D + T GH++ V C S + + +D+ + +W
Sbjct: 645 TAGKD-------NKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLW 697
Score = 64 (27.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQ--LATTQ 360
H+ V L ++ +G Y++SA D +RLW E R L+ E +Q + +A +
Sbjct: 669 HHQEVWCLALSPNGDYVVSASHDKSLRLW--ERTREPLILEEEREMQREAEYEESVAKEE 726
Query: 361 DPAV 364
P V
Sbjct: 727 QPVV 730
Score = 56 (24.8 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 12/46 (26%), Positives = 28/46 (60%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYE 80
+K +V H+ + + + ++EE+ L++G +DS + V+D+ + E
Sbjct: 183 FKTLVG-HRTEVWGMAL-VSEEKRLITGTADSELRVWDITYIQELE 226
Score = 51 (23.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
AH +V L+ +AG D++I+ WD +
Sbjct: 626 AHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDAD 658
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 154 (59.3 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H +SS + L TG D V +W N +M+ + G L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS--LTGHTSPVESVRLNTPEE 76
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
LI AG++ +R+ D+ + I +TL GH+ I ++++ E++ +G D I+ WDIR
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIR 135
Query: 222 RAGC-FRVLDQSQS 234
R GC FR SQ+
Sbjct: 136 RKGCVFRYRGHSQA 149
Score = 143 (55.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD V ++ + R SP
Sbjct: 103 GHKANICSLDFHPY--GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + GH + VE+ + E++L +G D IRFW
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFW 216
Query: 219 DIRRAGCFRVLDQSQSQLG 237
D+ + F+V+ + + G
Sbjct: 217 DLEK---FQVVSCIEGEPG 232
Score = 57 (25.1 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSR-IRLWDVESGRNTLVNFETVRLQTSKPIQLATT-- 359
H G V ++ YLL++GS R IR WD+E F+ V +P + +
Sbjct: 188 HTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEK-------FQVVSCIEGEPGPVRSVLF 239
Query: 360 -QDPAVVFVPCMTAVKAFDIWSGKTC 384
D ++ C +++ + W + C
Sbjct: 240 NPDGCCLYSGCQDSLRVYG-WEPERC 264
Score = 51 (23.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H + S++++ T E +++G+ S+ V+D++ A
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA 95
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 164 (62.8 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 80/355 (22%), Positives = 139/355 (39%)
Query: 81 GGGHIAKHRSVFVVDKQHE-HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVV 139
GG + ++ H GH + W P D+ T + +++W T
Sbjct: 159 GGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSP-DSKKIATAGMEGDIRIWCPQ-TGKQ 216
Query: 140 MNFKMPGKV-YRTAMS--P--LAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIM 194
+ + G + T +S P L + +A+ ++D +R+ D S +LSGH +
Sbjct: 217 LGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVT 276
Query: 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLG----RRPPLLKRKSLS- 249
++W E ++ +G D +R ++ RVLD + +L+ S
Sbjct: 277 CLKWG--GEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDH 334
Query: 250 AGQNSSVKPRAPQKRSANGNGVRQSSVG-RIPAKGSVRQRL---HPGML-SSQDRATAHY 304
G+ A + N V+ S G I GS + +P + +S R T H
Sbjct: 335 TGKEYDTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQ 394
Query: 305 GAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAV 364
+ + + DG Y SA D I+LWD +SG+ L NF R Q+ + D
Sbjct: 395 QLINLVSFSPDGRYFASASFDKSIKLWDGQSGK-FLGNF---RGHVGAVYQVCWSSDSRY 450
Query: 365 VFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ + +K +DI + K GH + V +S + +G DR + +W
Sbjct: 451 LVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 165 (63.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH + ++P ++ TGS D V++W N R+ + G V A SP
Sbjct: 424 GHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR--GPVLSLAFSP-- 478
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
L +AG ED +++L D+ASG + + L GH D I ++ +S S ++ + D ++R
Sbjct: 479 NGKYLASAG-EDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSS-LIASASMDNSVRV 536
Query: 218 WDIRRAGCFRVLDQSQSQL 236
WDIR C D S S+L
Sbjct: 537 WDIRNTHCSAPTDGSSSEL 555
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 154 (59.3 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H +SS + L TG D V +W N +M+ + G L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS--LTGHTSPVESVRLNTPEE 76
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
LI AG++ +R+ D+ + I +TL GH+ I ++++ E++ +G D I+ WDIR
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIR 135
Query: 222 RAGC-FRVLDQSQS 234
R GC FR SQ+
Sbjct: 136 RKGCVFRYRGHSQA 149
Score = 143 (55.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD V ++ + R SP
Sbjct: 103 GHKANICSLDFHPY--GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + GH + VE+ + E++L +G D IRFW
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFW 216
Query: 219 DIRRAGCFRVLDQSQSQLG 237
D+ + F+V+ + + G
Sbjct: 217 DLEK---FQVVSCIEGEPG 232
Score = 57 (25.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSR-IRLWDVESGRNTLVNFETVRLQTSKPIQLAT--- 358
H G V ++ YLL++GS R IR WD+E F+ V +P + +
Sbjct: 188 HTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEK-------FQVVSCIEGEPGPVRSILF 239
Query: 359 TQDPAVVFVPCMTAVKAFDIWSGKTC 384
D ++ C +++ + W + C
Sbjct: 240 NPDGCCLYSGCQDSLRVYG-WEPERC 264
Score = 51 (23.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H + S++++ T E +++G+ S+ V+D++ A
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA 95
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 123 (48.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177
L +GS D +K+WD + P +V TA+ +I+ G ++ +V++ DI
Sbjct: 155 LLCSGSDDRTIKIWDARKKHAAHTLESPFQV--TAVCFGDTGEQVISGGIDN-EVKIWDI 211
Query: 178 ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
A+ L GH D I + S ++IL T D +R WD+R
Sbjct: 212 RKQAVLHHLRGHSDTITGMSLSPEGDFIL-TNAMDNTLRVWDVR 254
Score = 119 (46.9 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 32/132 (24%), Positives = 60/132 (45%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAA 158
GH+ I +A ++P + L ++ +D + +W +C V+ G V +P
Sbjct: 53 GHEGEIFTAEFHP-EGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTP-DG 110
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
SH+ + D + DIA+G + GH + + +V+ S + +L +G D I+ W
Sbjct: 111 SHIFTCS--TDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIW 168
Query: 219 DIRRAGCFRVLD 230
D R+ L+
Sbjct: 169 DARKKHAAHTLE 180
Score = 100 (40.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 29/122 (23%), Positives = 53/122 (43%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH A+ A + P + +F T S D + WD + FK G +
Sbjct: 96 GHSGAVMEAHFTPDGSHIF-TCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGS-RRGQ 153
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L+ +G++D +++ D + TL + V + + E + ++GG D ++ WDI
Sbjct: 154 QLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQV-ISGGIDNEVKIWDI 211
Query: 221 RR 222
R+
Sbjct: 212 RK 213
Score = 86 (35.3 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 27/119 (22%), Positives = 55/119 (46%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVES---GRNTLVNFETVRLQTSKPIQLATT 359
H +TG+ ++ +G ++L+ D+ +R+WDV G + F+ + K + L
Sbjct: 223 HSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNL-LRCA 281
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTC-LTFR--GHYEYVNCCCFSSQDQELYTGGNDRQI 415
P + +A + IW T + ++ GH VN FS ++ + +G +D+ +
Sbjct: 282 WSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTL 340
Score = 77 (32.2 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 25/121 (20%), Positives = 54/121 (44%)
Query: 307 VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVF 366
VT + + G ++S G D+ +++WD+ + +++ T + L+ D +
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIR--KQAVLHHLRGHSDTITGMSLSPEGD--FIL 240
Query: 367 VPCM-TAVKAFDIWS---GKTCL-TFRGHYEYV--NC--CCFSSQDQELYTGGNDRQILV 417
M ++ +D+ G+ C+ F+GH N C +S ++ +G DR + +
Sbjct: 241 TNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYI 300
Query: 418 W 418
W
Sbjct: 301 W 301
Score = 38 (18.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
H G+V + + +LS SD + L +++
Sbjct: 315 HNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 167 (63.8 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H ++ S+ ++++++SG+ D +V V+D+ T EG + K RS E
Sbjct: 431 HSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGV-MMMKARST-------ERA 482
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRV--VMNFKMPGKVYRTAMSPLAAS 159
H+ ++S P D L +GS D K+W + R+ V G V+ SP+
Sbjct: 483 HEKDVNSVCVSPNDK-LLASGSQDRTAKLWALSDLRLLGVCRGHRRG-VWSVQFSPV--- 537
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
++ + + D VR+ I + +T GH ++ + + S LV+ G DG ++ W
Sbjct: 538 DQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIF-VSRGTQLVSSGSDGLVKLWT 596
Query: 220 IRRAGCFRVLDQSQSQL 236
I+ C R LD Q ++
Sbjct: 597 IKTNECVRTLDAHQDKV 613
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 54/215 (25%), Positives = 94/215 (43%)
Query: 24 SHRLSTLQLS-NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGG 82
S +L +LS N +I+ H +I S+ V + + A D SV V+ + ++ G
Sbjct: 366 SSQLKVFELSTNSCQILHGHTDTILSIDV-FRKGSMFATCAKDKSVRVWRMDVSS---GR 421
Query: 83 GHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWD---TNCTRVV 139
H + GH A+ S + V+GS D VKVWD T V
Sbjct: 422 VHCVAQGT----------GHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGV 471
Query: 140 MNFKMPG--KVYRTAMSPLAAS--HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMT 195
M K + + ++ + S L+A+G++D +L ++ + GHR G+ +
Sbjct: 472 MMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWS 531
Query: 196 VEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230
V++S + IL + DG++R W I+ C + +
Sbjct: 532 VQFSPVDQ-ILGSASADGSVRIWSIQDFSCLKTFE 565
Score = 92 (37.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 31/121 (25%), Positives = 52/121 (42%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174
D + V+ S ++ WD + +++ V +MS + L+A G D ++L
Sbjct: 74 DDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMS-FDCTSTLLATGGCDGTIKL 132
Query: 175 CDIASGAISQTLSGHRDGIMTVEWSTS-SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
D+ + L G + VE+ S L + D AIR WD+R + C VL+
Sbjct: 133 WDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHY 192
Query: 234 S 234
S
Sbjct: 193 S 193
Score = 86 (35.3 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 35/130 (26%), Positives = 49/130 (37%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLW--DVESGRNTLVNFETVRLQTSKPIQLATTQ 360
H + + V G + D +R+W DV SGR V T I + +
Sbjct: 385 HTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMK 444
Query: 361 DPAVVFVPCMTAVKAFDI--WSG-------KTCLTFRGHYEYVNCCCFSSQDQELYTGGN 411
VV VK +D+ +G K T R H + VN C S D+ L +G
Sbjct: 445 QQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQ 504
Query: 412 DRQILVWCPS 421
DR +W S
Sbjct: 505 DRTAKLWALS 514
Score = 74 (31.1 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETV 346
+HY VT L + DG L+S+G D +WD++ + T+ +E V
Sbjct: 190 SHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAV 236
Score = 42 (19.8 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 11/65 (16%), Positives = 24/65 (36%)
Query: 354 IQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDR 413
++ D + + +K F++ S +C GH + + + T D+
Sbjct: 350 VKFVGKDDTHIAVATNSSQLKVFEL-STNSCQILHGHTDTILSIDVFRKGSMFATCAKDK 408
Query: 414 QILVW 418
+ VW
Sbjct: 409 SVRVW 413
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 130 (50.8 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 42/185 (22%), Positives = 77/185 (41%)
Query: 44 GSINSLQVDLTE---ERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEH 100
G++ ++ +D E R+ +++S A D +AT Y G + K + + + HE+
Sbjct: 263 GAMEAIGLDDNEYISARFTAGEIAENSRASIDTLKATGYLGQANPTK---ILMKFEAHEN 319
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
+A+ W PV+ + TG D VK+WD + G ++
Sbjct: 320 -ESHAVR---WSPVER-MVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFDSTG 374
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
I + D R+ + + TL+GH +M ++ +VTG D ++ WD+
Sbjct: 375 AYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKY-VQEPIKVVTGSHDRTLKIWDL 433
Query: 221 RRAGC 225
R C
Sbjct: 434 RSIAC 438
Score = 85 (35.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 28/109 (25%), Positives = 52/109 (47%)
Query: 116 TGLFVTG-SYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174
TG ++ G S D+ +VW R + + G + + + + G+ D +++
Sbjct: 373 TGAYILGTSNDYGARVWTVMDNR--LRHTLTGHSGKVMAAKYVQEPIKVVTGSHDRTLKI 430
Query: 175 CDIASGAISQT-LSGHR-DGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
D+ S A +T +G + ++T + S S +++G D IRFWDIR
Sbjct: 431 WDLRSIACIETKFAGSSCNDLVTTD-SLGST--IISGHYDKKIRFWDIR 476
Score = 81 (33.6 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 27/117 (23%), Positives = 52/117 (44%)
Query: 307 VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVF 366
+T L +++D YL+ + D I+L D+ + + F + S A+ +
Sbjct: 490 ITSLDLSKDCNYLICSVRDDTIKLLDLRKNQ-VISTFTNEHFKISCDFARASFNSSGLK- 547
Query: 367 VPCMTAVKAFDIWSGKTCL--TFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 421
+ C +A A IW+ L T +GH VN +S + L + G +++ ++ S
Sbjct: 548 IACGSADGAIYIWNVNGFLEATLKGHSTAVNAVSWSPNNNMLASVGKNKRCTIYSES 604
Score = 70 (29.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 26/114 (22%), Positives = 47/114 (41%)
Query: 312 VTED--GMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC 369
VT D G ++S D +IR WD+ + + + V L +K L ++D +
Sbjct: 452 VTTDSLGSTIISGHYDKKIRFWDIRTEKQA----DDV-LMPAKITSLDLSKDCNYLICSV 506
Query: 370 MT-AVKAFDIWSGKTCLTFRGHYEYVNC----CCFSSQDQELYTGGNDRQILVW 418
+K D+ + TF + ++C F+S ++ G D I +W
Sbjct: 507 RDDTIKLLDLRKNQVISTFTNEHFKISCDFARASFNSSGLKIACGSADGAIYIW 560
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 162 (62.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 53/194 (27%), Positives = 89/194 (45%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGG-----GHIAKHRSVFVVDK 96
H GS++S+ VD T ++ SG+ D + ++ TD E K + +
Sbjct: 188 HAGSVDSIAVDSTGTKFC-SGSWDKMLKIWSAV-PTDEEDELEEPTNRPRKKQKTEQLGL 245
Query: 97 QHE-----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRT 151
GHK AISS +W D + S+DH ++VWD + KV+
Sbjct: 246 TRTPIVTLSGHKEAISSVLWS--DAEEICSASWDHTIRVWDVESGSLKSTLT-GNKVFNC 302
Query: 152 -AMSPLAASHMLIAAGTEDVQVRLCD--IASGA-ISQTLSGHRDGIMTVEWSTSSEWILV 207
+ SPL +A+G+ D +RL D G+ +S +L+ H + +++WS + E L+
Sbjct: 303 ISYSPLCKR---LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLI 359
Query: 208 TGGCDGAIRFWDIR 221
+G D ++ WD R
Sbjct: 360 SGSLDNIVKLWDTR 373
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 137 (53.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 41/143 (28%), Positives = 69/143 (48%)
Query: 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
EHG ++ ++P T + G D+ VKVWDT R+V ++++ A+S +
Sbjct: 185 EHGG--FVTYVDFHPSGTCIAAAGM-DNTVKVWDTRTHRLVQHYQLHSAAVN-ALSFHPS 240
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+ LI A + D +++ D+ G + TL GH+ TV +S + E+ +GG D + W
Sbjct: 241 GNYLITASS-DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF-ASGGSDEQVMVW 298
Query: 219 DIRRAGCFRVLDQSQSQLGRRPP 241
F +D + RRPP
Sbjct: 299 KSN----FDTVDYGDMK-ARRPP 316
Score = 116 (45.9 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 32/132 (24%), Positives = 57/132 (43%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H G VT + G + +AG D+ +++WD + R LV + + + +
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHR--LVQHYQLHSAAVNALSFHPSGN- 242
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSR 422
++ + +K D+ G+ T GH FS + +GG+D Q++VW +
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW---K 299
Query: 423 HISDGVDAGPMQ 434
D VD G M+
Sbjct: 300 SNFDTVDYGDMK 311
Score = 77 (32.2 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 29/131 (22%), Positives = 56/131 (42%)
Query: 101 GHKYAISSAIWYPVDTG-LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
GHK A++ + P +G L +GS D V++W V N K V+R + + +
Sbjct: 59 GHKDAVTCVNFSP--SGHLLASGSRDKTVRIW-------VPNVKGESTVFRAHTATVRSV 109
Query: 160 HM-----LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
H L+ ++D V++ +L+ H + + ++S ++V+ D
Sbjct: 110 HFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGR-LIVSASDDKT 168
Query: 215 IRFWDIRRAGC 225
++ WD C
Sbjct: 169 VKLWDKTSREC 179
Score = 68 (29.0 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+G+ D + + + + + +GH+D + V +S S +L +G D +R W
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH-LLASGSRDKTVRIW 88
Score = 60 (26.2 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
++ + GHRD + V++S +++ L +G D + W ++
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHMK 49
Score = 46 (21.3 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 10/44 (22%), Positives = 25/44 (56%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQ-RATDYEGGGH 84
H+ ++ + L ++L SG+ DS++ ++ ++ ++ Y GH
Sbjct: 18 HRDAVTCVDFSLNT-KHLASGSMDSTLMIWHMKPQSRAYRFTGH 60
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 112 (44.5 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
+GHK AI+S + Y G +GS D + VWD + K A+ L
Sbjct: 104 NGHKAAITS-LKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALF-LREK 161
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
++L+ +G +D V+ D+ + +T+ GHR + + S E L+TG D +R WD
Sbjct: 162 NLLVTSG-KDTMVKWWDLDTQHCFKTMVGHRTEVWGLVL-VSEEKRLITGASDSELRAWD 219
Query: 220 I 220
I
Sbjct: 220 I 220
Score = 104 (41.7 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 43/160 (26%), Positives = 67/160 (41%)
Query: 270 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIR 329
G RQ +G K + +L + D AH GA+ L ++ D ++ G+D ++
Sbjct: 465 GDRQVVIGTKTGKLQLYDLASGNLLETID---AHDGALWSLSLSPDQRGFVTGGADKSVK 521
Query: 330 LWDVE------SGRNTLVNFETVRLQTSKPIQLATTQDP-----AVVFVPCMTAVKAFDI 378
WD E S + L +T LQ + + L + P AV + C VK F +
Sbjct: 522 FWDFELVKDENSTQKRLSVKQTRTLQLDEEV-LCVSYSPNQKLLAVSLLDC--TVKIFYV 578
Query: 379 WSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ K L+ GH V C S + TG DR + +W
Sbjct: 579 DTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIW 618
Score = 102 (41.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 44/194 (22%), Positives = 78/194 (40%)
Query: 26 RLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHI 85
+L L N E + H G++ SL + ++R ++G +D SV +D + D
Sbjct: 479 QLYDLASGNLLETIDAHDGALWSLSLS-PDQRGFVTGGADKSVKFWDFELVKDENS---T 534
Query: 86 AKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP 145
K SV KQ + Y + L D VK++ + + ++ +
Sbjct: 535 QKRLSV----KQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLS--LY 588
Query: 146 GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWI 205
G ++ LIA G+ D V++ + G ++L H D +M + + S +
Sbjct: 589 GHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSH-L 647
Query: 206 LVTGGCDGAIRFWD 219
T G D I+ WD
Sbjct: 648 FFTAGKDRKIKQWD 661
Score = 98 (39.6 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ + + + + D ++ + D +K+W+ + + + Y S
Sbjct: 413 GHRSDVRT-LSFSSDNIAILSAAADS-IKIWNRSTLQCIRTMACE---YALC-SFFVPGD 466
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTS---SEWILVTGGCDGAIRF 217
+ GT+ +++L D+ASG + +T+ H DG + WS S + VTGG D +++F
Sbjct: 467 RQVVIGTKTGKLQLYDLASGNLLETIDAH-DGAL---WSLSLSPDQRGFVTGGADKSVKF 522
Query: 218 WD 219
WD
Sbjct: 523 WD 524
Score = 97 (39.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 22/93 (23%), Positives = 47/93 (50%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
+A+G++D + + D+ + + L GH+D I + +LVT G D +++WD+
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKN-LLVTSGKDTMVKWWDLDT 180
Query: 223 AGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSS 255
CF+ + ++++ + + K L G + S
Sbjct: 181 QHCFKTMVGHRTEVWGLVLVSEEKRLITGASDS 213
Score = 90 (36.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 34/147 (23%), Positives = 69/147 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYR-TAMSPLAASHMLIAAGTEDVQVR 173
+ G +V +V +WD ++ + G + T + P + + +A G ED +R
Sbjct: 34 EKGRYVAVPACEHVFIWDLRKGEKILILQ--GLKHEVTCLCP-SPDGLHLAVGYEDGSIR 90
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD-IRRAGCFRVLDQS 232
+ + SG + T +GH+ I ++++ L +G D I WD I +G +R+ +
Sbjct: 91 IFSLLSGEGNVTFNGHKAAITSLKYDQLGGR-LASGSKDTDIIVWDVINESGLYRL--KG 147
Query: 233 QSQLGRRPPLLKRKSL--SAGQNSSVK 257
+ L+ K+L ++G+++ VK
Sbjct: 148 HKDAITQALFLREKNLLVTSGKDTMVK 174
Score = 80 (33.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 29/116 (25%), Positives = 48/116 (41%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V L + D + +LSA +DS I++W+ R+TL T+ + + D
Sbjct: 414 HRSDVRTLSFSSDNIAILSAAADS-IKIWN----RSTLQCIRTMACEYAL-CSFFVPGDR 467
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
VV ++ +D+ SG T H + S + TGG D+ + W
Sbjct: 468 QVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFW 523
Score = 70 (29.7 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 27/94 (28%), Positives = 43/94 (45%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD-YEGGGHI-AKHRSVFVVDKQH- 98
HK +I SL+ D R L SG+ D+ + V+DV + Y GH A +++F+ +K
Sbjct: 106 HKAAITSLKYDQLGGR-LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLL 164
Query: 99 -EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVW 131
G + W+ +DT H +VW
Sbjct: 165 VTSGKDTMVK---WWDLDTQHCFKTMVGHRTEVW 195
Score = 65 (27.9 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQ--LATTQ 360
H+ + L V+ G Y++S+ D +RLW E R L+ E +Q + +A
Sbjct: 674 HHQEIWCLAVSPSGDYVVSSSHDKSLRLW--ERTREPLILEEEKEMQREAEYEESVAKED 731
Query: 361 DPAV 364
PAV
Sbjct: 732 QPAV 735
Score = 61 (26.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYE 80
+K +V H+ + L V ++EE+ L++GASDS + +D+ + E
Sbjct: 184 FKTMVG-HRTEVWGL-VLVSEEKRLITGASDSELRAWDISYLQEIE 227
Score = 59 (25.8 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
T+ GHR + T+ S SS+ I + +I+ W+ C R +
Sbjct: 410 TIGGHRSDVRTL--SFSSDNIAILSAAADSIKIWNRSTLQCIRTM 452
Score = 58 (25.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 18/117 (15%), Positives = 46/117 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V + ++ DG + + +D +++W ++ G +++ + L
Sbjct: 590 HKLPVICMDISYDGALIATGSADRNVKIWGLDFGDC----HKSLFAHDDSVMYLRFVPKS 645
Query: 363 AVVFVPCMTA-VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ F +K +D + T GH++ + C S + + +D+ + +W
Sbjct: 646 HLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 50 (22.7 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
AH +V L+ +AG D +I+ WD +
Sbjct: 631 AHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDAD 663
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 148 (57.2 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD + +K + R SP
Sbjct: 102 GHKANICSLDFHPY--GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP--- 156
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + +GH + VE+ S E++L +G IRFW
Sbjct: 157 DGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFW 216
Query: 219 DIRR 222
D+ +
Sbjct: 217 DLEK 220
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/135 (28%), Positives = 64/135 (47%)
Query: 102 HKYAISSAIWYPVDTG-LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
H +SS + TG L TG D V VW R + + G ++A
Sbjct: 19 HSSNVSSLV-LGKSTGRLLATGGDDCRVNVWSVAQLRHDL---LTGHTTPIESLQISAKE 74
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
LI AG++ +R+ D+ + I +TL GH+ I ++++ ++ +G D I+ WD+
Sbjct: 75 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDV 133
Query: 221 RRAGC-FRVLDQSQS 234
RR GC F+ +Q+
Sbjct: 134 RRKGCIFKYKSHTQA 148
Score = 62 (26.9 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 28 STLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
S QL + ++++ H I SLQ+ EE +++G+ S+ V+D++ A
Sbjct: 49 SVAQLRH--DLLTGHTTPIESLQISAKEE-LIVAGSQSGSIRVWDLEAA 94
Score = 53 (23.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVD 95
+EIV+ H +++SL + + R L +G D V V+ V + GH S+ +
Sbjct: 14 QEIVA-HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDLLTGHTTPIESLQISA 72
Query: 96 KQ 97
K+
Sbjct: 73 KE 74
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 111 (44.1 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
+GHK A++S + Y G +GS D + VWD + K A+ L
Sbjct: 104 NGHKAAVTS-LKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALF-LREK 161
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
++L+++G +D V+ D+ + +T+ GHR + + S E L+TG D +R WD
Sbjct: 162 NLLVSSG-KDTMVKWWDLDTQHCFKTVVGHRTEVWGLVL-VSEEKRLITGASDSELRAWD 219
Query: 220 I 220
I
Sbjct: 220 I 220
Score = 105 (42.0 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 43/160 (26%), Positives = 67/160 (41%)
Query: 270 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIR 329
G RQ +G K + +L + D AH GA+ L ++ D ++ G+D ++
Sbjct: 465 GDRQVVIGTKTGKLQLYDLASGNLLETVD---AHDGALWSLSLSPDQRGFVTGGADKSVK 521
Query: 330 LWDVE------SGRNTLVNFETVRLQTSKPIQLATTQDP-----AVVFVPCMTAVKAFDI 378
WD E S + L +T LQ + + L + P AV + C VK F +
Sbjct: 522 FWDFELVKDENSTQKRLSVKQTRTLQLDEEV-LCVSYSPNQKLLAVSLLDC--TVKIFYV 578
Query: 379 WSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ K L+ GH V C S + TG DR + +W
Sbjct: 579 DTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIW 618
Score = 105 (42.0 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 38/127 (29%), Positives = 56/127 (44%)
Query: 100 HGHKY-AISSAIWYPVDTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSP 155
+GHK I I Y D L TGS D VK+W + C + + F V P
Sbjct: 588 YGHKLPVICMDISY--DGALIATGSADRNVKIWGLDFGDCHKSL--FAHDDSVMYLKFVP 643
Query: 156 LAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215
SH+ AG +D +++ D QTL GH I + S S +++ V+ D ++
Sbjct: 644 --KSHLFFTAG-KDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDYV-VSSSHDKSL 699
Query: 216 RFWDIRR 222
R W+ R
Sbjct: 700 RLWERTR 706
Score = 104 (41.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 45/194 (23%), Positives = 79/194 (40%)
Query: 26 RLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHI 85
+L L N E V H G++ SL + ++R ++G +D SV +D + D
Sbjct: 479 QLYDLASGNLLETVDAHDGALWSLSLS-PDQRGFVTGGADKSVKFWDFELVKDENS---T 534
Query: 86 AKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP 145
K SV KQ + Y + L D VK++ + + ++ +
Sbjct: 535 QKRLSV----KQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLS--LY 588
Query: 146 GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWI 205
G ++ LIA G+ D V++ + G ++L H D +M +++ S +
Sbjct: 589 GHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSH-L 647
Query: 206 LVTGGCDGAIRFWD 219
T G D I+ WD
Sbjct: 648 FFTAGKDRKIKQWD 661
Score = 98 (39.6 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ + + + + D ++G+ + +K+W+ + + + Y S
Sbjct: 413 GHRSDVRT-LSFSSDNIAVLSGAAES-IKIWNRSTLQCIRTMTCE---YALC-SFFVPGD 466
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTS---SEWILVTGGCDGAIRF 217
+ GT+ +++L D+ASG + +T+ H DG + WS S + VTGG D +++F
Sbjct: 467 RQVVIGTKTGKLQLYDLASGNLLETVDAH-DGAL---WSLSLSPDQRGFVTGGADKSVKF 522
Query: 218 WD 219
WD
Sbjct: 523 WD 524
Score = 92 (37.4 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 21/93 (22%), Positives = 47/93 (50%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
+A+G++D + + D+ + + L GH+D I + +LV+ G D +++WD+
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKN-LLVSSGKDTMVKWWDLDT 180
Query: 223 AGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSS 255
CF+ + ++++ + + K L G + S
Sbjct: 181 QHCFKTVVGHRTEVWGLVLVSEEKRLITGASDS 213
Score = 92 (37.4 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 34/147 (23%), Positives = 69/147 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYR-TAMSPLAASHMLIAAGTEDVQVR 173
+ G +V +V +WD ++ + G + T + P + + +A G ED +R
Sbjct: 34 EKGRYVAVPACEHVFIWDLRKGEKILILQ--GLKHEVTCLCP-SPDGLHLAVGYEDGSIR 90
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD-IRRAGCFRVLDQS 232
+ + SG + T +GH+ + ++++ L +G D I WD I +G +R+ +
Sbjct: 91 IFSLLSGEGNVTFNGHKAAVTSLKYDQLGGR-LASGSKDTDIIVWDVINESGLYRL--KG 147
Query: 233 QSQLGRRPPLLKRKSL--SAGQNSSVK 257
+ L+ K+L S+G+++ VK
Sbjct: 148 HKDAITQALFLREKNLLVSSGKDTMVK 174
Score = 69 (29.3 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD-YEGGGHI-AKHRSVFVVDKQH- 98
HK ++ SL+ D R L SG+ D+ + V+DV + Y GH A +++F+ +K
Sbjct: 106 HKAAVTSLKYDQLGGR-LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLL 164
Query: 99 -EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVW 131
G + W+ +DT H +VW
Sbjct: 165 VSSGKDTMVK---WWDLDTQHCFKTVVGHRTEVW 195
Score = 65 (27.9 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
T+ GHR + T+ S SS+ I V G +I+ W+ C R +
Sbjct: 410 TIGGHRSDVRTL--SFSSDNIAVLSGAAESIKIWNRSTLQCIRTM 452
Score = 63 (27.2 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQ--LATTQ 360
H+ + L ++ G Y++S+ D +RLW E R L+ E +Q + +A
Sbjct: 674 HHQEIWCLAISPSGDYVVSSSHDKSLRLW--ERTREPLILEEEREMQREAEYEESVAKED 731
Query: 361 DPAV 364
PAV
Sbjct: 732 QPAV 735
Score = 62 (26.9 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYE 80
+K +V H+ + L V ++EE+ L++GASDS + +D+ + E
Sbjct: 184 FKTVVG-HRTEVWGL-VLVSEEKRLITGASDSELRAWDIAYLEEIE 227
Score = 59 (25.8 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 18/117 (15%), Positives = 46/117 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V + ++ DG + + +D +++W ++ G +++ + L
Sbjct: 590 HKLPVICMDISYDGALIATGSADRNVKIWGLDFGDC----HKSLFAHDDSVMYLKFVPKS 645
Query: 363 AVVFVPCMTA-VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ F +K +D + T GH++ + C S + + +D+ + +W
Sbjct: 646 HLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLW 702
Score = 53 (23.7 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
AH +V LK +AG D +I+ WD +
Sbjct: 631 AHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDAD 663
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 161 (61.7 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 51/193 (26%), Positives = 89/193 (46%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDV----QRATDYEGGGHIAKHRSVFVVDKQ 97
H GS++++ D T ++ SG+ D + ++ + + E K + +
Sbjct: 188 HAGSVDTIATDPTRTKFC-SGSWDKMLKIWSAVATEEEEEEEEPPSRPRKKQKTEQLGLT 246
Query: 98 HE-----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYR-T 151
GH A+SS +W +D+ + S+DH +++WD T V KV+
Sbjct: 247 RTPLMTLSGHNEAVSSVLW--LDSEEICSASWDHTIRLWDAE-TGSVKTSLTGSKVFNHI 303
Query: 152 AMSPLAASHMLIAAGTEDVQVRLCDIAS--GA-ISQTLSGHRDGIMTVEWSTSSEWILVT 208
+ SPL +A+G+ D VRL D S G+ + +L+ H + V+W+ S E LV+
Sbjct: 304 SYSPLCRR---LASGSTDRHVRLWDPRSKDGSLVLLSLTSHSGWVTAVKWAPSHEHQLVS 360
Query: 209 GGCDGAIRFWDIR 221
G D ++ WD R
Sbjct: 361 GSLDNLVKLWDTR 373
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 134 (52.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH + + S W+P + L V+G D+ VK+WD R + +F + + +
Sbjct: 89 GHGWDVKSVDWHPTKS-LLVSGGKDYLVKLWDAKSGRELRSFHGHKNIVQCVKWNQNGNW 147
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+L A+ +D ++L DI S ++ GH + + W E V+G DGAI W
Sbjct: 148 VLTAS--KDQIIKLYDIRSMKELESFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHW 203
Score = 119 (46.9 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 32/122 (26%), Positives = 61/122 (50%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLA--AS 159
H A+ S IW + + VTG +K W +N V +N K +R ++ L+ +
Sbjct: 6 HDQAVRSMIWSNNENWM-VTGDDGGAIKYWQSNMNNVKVN-KT---AHRESVRDLSFCRT 60
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+ + ++D V++ D A ++L+GH + +V+W + +LV+GG D ++ WD
Sbjct: 61 DLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKS-LLVSGGKDYLVKLWD 119
Query: 220 IR 221
+
Sbjct: 120 AK 121
Score = 118 (46.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/142 (26%), Positives = 64/142 (45%)
Query: 80 EGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVV 139
+ GG I +S K ++ H+ ++ + D F + S D VKVWD R
Sbjct: 26 DDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRTDLK-FCSCSDDTTVKVWDF--ARCQ 82
Query: 140 MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ G + + L+ +G +D V+L D SG ++ GH++ + V+W+
Sbjct: 83 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSGRELRSFHGHKNIVQCVKWN 142
Query: 200 TSSEWILVTGGCDGAIRFWDIR 221
+ W+L T D I+ +DIR
Sbjct: 143 QNGNWVL-TASKDQIIKLYDIR 163
Score = 90 (36.7 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 34/124 (27%), Positives = 53/124 (42%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVR--LQTSKPIQLATTQDPAVVFVPCMTAVKAF 376
L+S G D ++LWD +SGR L +F + +Q K Q V+ +K +
Sbjct: 106 LVSGGKDYLVKLWDAKSGRE-LRSFHGHKNIVQCVKWNQNGNW----VLTASKDQIIKLY 160
Query: 377 DIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGN-DRQILVWCPSRHISDGVDAGPMQD 435
DI S K +FRGH + V + +E + G+ D I W H + ++ D
Sbjct: 161 DIRSMKELESFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHWLVG-HETPQIEINNAHD 219
Query: 436 QDNW 439
W
Sbjct: 220 NSVW 223
Score = 49 (22.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 406 LYTGGNDRQILVWCPSRH---ISDGVDAGPMQ 434
L +GGND WC +R D ++G MQ
Sbjct: 234 LCSGGNDHATRFWCRNRPGDLTRDKYNSGQMQ 265
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLW 331
AH +V L G L S G+D R W
Sbjct: 217 AHDNSVWDLAWHPVGYLLCSGGNDHATRFW 246
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 162 (62.1 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 63/230 (27%), Positives = 103/230 (44%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-- 77
N +K STL+ K I++ H GS+ LQ D ER +++G+SDS+V V+DV
Sbjct: 224 NTIKIWDKSTLEC---KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNAGEML 277
Query: 78 -------------DYEGGGHI--AKHRSVFVVDKQHEH---------GHKYAISSAIWYP 113
+ G + +K RS+ V D GH+ A++ +
Sbjct: 278 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 335
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D V+ S D +KVW+T+ V G ++ ++ L L+ +G+ D +R
Sbjct: 336 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIR 390
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
L DI GA + L GH + + + + +V+G DG I+ WD+ A
Sbjct: 391 LWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAA 437
Score = 137 (53.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 115 DTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G+ VT S D + VWD + T + + + G +R A++ + I + + D ++
Sbjct: 293 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIK 350
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
+ + ++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+
Sbjct: 351 VWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GH 406
Query: 234 SQLGRRPPLLKRKSLSAGQNSSVK 257
+L R ++ +S + +K
Sbjct: 407 EELVRCIRFDNKRIVSGAYDGKIK 430
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD + C R++ G V L +I G+ D
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHT--GSVLC-----LQYDERVIITGSSDST 265
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + ++ ++VT D +I WD+
Sbjct: 266 VRVWDVNAGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 311
Score = 87 (35.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W+ + E VR +A Q
Sbjct: 326 HRAAVN--VVDFDDKYIVSASGDRTIKVWNTST-------CEFVRTLNGHKRGIACLQYR 376
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 377 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 432
Score = 43 (20.2 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+ + + T+ L+T
Sbjct: 416 DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRT 451
Score = 40 (19.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 455 HSGRVFRLQFDE--FQIVSSSHDDTILIWD 482
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 165 (63.1 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 55/246 (22%), Positives = 111/246 (45%)
Query: 18 FANRVKSHRLSTLQLSNYKEIV-----SPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
FA+ K + +++ E+ S H S+ ++ +E +L++G+ D +V ++
Sbjct: 391 FASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWP 450
Query: 73 VQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWD 132
+ A +G GH + VF+ + + H I+S P D L TGS D K+W
Sbjct: 451 LPEALLSKGTGH--EGGPVFLQAQATQRCHDKDINSVAVAPNDK-LLATGSQDRTAKLWA 507
Query: 133 TNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRD 191
+++ F + ++ SP+ ++A + D ++L + + +T GH
Sbjct: 508 LPRCQLLGTFSGHRRGLWCVQFSPM---DQVLATASADGTIKLWALQDFSCLKTFEGHDA 564
Query: 192 GIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQL-GRRPPLLKRKSLSA 250
++ V + + +L + G DG ++ W I+ C R LD + ++ G L ++L+
Sbjct: 565 SVLKVAFVSRGTQLL-SSGSDGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTG 623
Query: 251 GQNSSV 256
+S V
Sbjct: 624 ASDSRV 629
Score = 92 (37.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVES--GRNTLVNFETVRLQTSKP 353
TAHY AVT L + DG +LS+G D +WD+ S T+ FE+V P
Sbjct: 192 TAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLP 246
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 189 HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCF 226
H + T+ + +S +L TGGCDGA+R WD+ R C+
Sbjct: 108 HTAPVATMAFDPTST-LLATGGCDGAVRVWDVVR--CY 142
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH ++ ++P ++ TGS D V++WD NC R+ K G ++ SP
Sbjct: 385 GHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHK--GPIHSLTFSP-- 439
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ +A G D +V L DI G + L GH D + ++ +S E IL +G D +R
Sbjct: 440 -NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRL 497
Query: 218 WDIRRAGCFRVLDQSQSQ 235
WD +A F L+ SQ
Sbjct: 498 WDAVKA--FEDLETDNSQ 513
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH ++ ++P ++ TGS D V++WD NC R+ K G ++ A SP
Sbjct: 581 GHLADVTCTRFHP-NSNYVATGSSDRTVRLWDVLNGNCVRIFTGHK--GPIHSLAFSP-- 635
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ +A+G+ D +V L DI G + L GH I +++S E I+ +G D +R
Sbjct: 636 -NGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGE-IIASGSIDNTVRL 693
Query: 218 WDIRRA 223
WD+ RA
Sbjct: 694 WDVMRA 699
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 31/120 (25%), Positives = 58/120 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH Y + + P FV+G +D ++W T+ + + F G + + +
Sbjct: 539 GHNYPVWDTQFSPFGY-YFVSGGHDRVARLWATDHYQPLRIFA--GHLADVTCTRFHPNS 595
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+A G+ D VRL D+ +G + +GH+ I ++ +S + ++ L +G DG + WDI
Sbjct: 596 NYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKF-LASGSTDGRVLLWDI 654
Score = 102 (41.0 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 41/194 (21%), Positives = 79/194 (40%)
Query: 51 VDLTEERYLLSGA-SDSSVAVYDVQ----RATDYEGGGHIAKHRSVFVVDKQHE------ 99
VD T++ L++G +DS+V V+ V R ++ S V+++ +
Sbjct: 432 VDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSE 491
Query: 100 ----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMS 154
HGH + + P D ++ S D +++W ++ +K V+ T S
Sbjct: 492 SKILHGHSGPVYGVSFSP-DRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFS 550
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P + ++ G + V RL + +GH + + +S ++ TG D
Sbjct: 551 PFG--YYFVSGGHDRV-ARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYV-ATGSSDRT 606
Query: 215 IRFWDIRRAGCFRV 228
+R WD+ C R+
Sbjct: 607 VRLWDVLNGNCVRI 620
Score = 90 (36.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 33/118 (27%), Positives = 52/118 (44%)
Query: 108 SAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGT 167
+A+ + D+ L G D V+VW P K+ R S AA LI +
Sbjct: 430 TAVDFTDDSSLIAGGFADSTVRVWSVT----------PKKL-RKVKS--AADLNLIDKES 476
Query: 168 EDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGC 225
+DV R+ D + + S+ L GH + V +S ++L + DG IR W ++ C
Sbjct: 477 DDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSE-DGTIRLWSLQTFTC 533
Score = 80 (33.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 33/129 (25%), Positives = 51/129 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSK--PIQLATTQ 360
H VT + + Y+ + SD +RLWDV +G VR+ T PI +
Sbjct: 582 HLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGN-------CVRIFTGHKGPIH-SLAF 633
Query: 361 DPAVVFVPCMTA---VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILV 417
P F+ + V +DI G +GH + FS + + +G D + +
Sbjct: 634 SPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRL 693
Query: 418 WCPSRHISD 426
W R I D
Sbjct: 694 WDVMRAIDD 702
Score = 75 (31.5 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
T H G + L + +G +L S +D R+ LWD+ G
Sbjct: 622 TGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHG 657
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK IS W D+ L V+ S D +K+WD + + + K V+ +P +
Sbjct: 59 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN- 116
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D VR+ D+ +G +TL H D + V ++ ++V+ DG R WD
Sbjct: 117 --LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWD 173
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 174 TASGQCLKTL 183
Score = 133 (51.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE-TVRLQTSKPIQLATTQD 361
H AV+ +K + +G +L S+ +D I++W G+ FE T+ +A + D
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSD 72
Query: 362 P-AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+V +K +D+ SGK T +GH YV CC F+ Q + +G D + +W
Sbjct: 73 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Score = 112 (44.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 108 SAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIA 164
SA+ + D L V+ SYD ++WDT C + +++ P V SP + I
Sbjct: 149 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSP---NGKYIL 204
Query: 165 AGTEDVQVRLCDIASGAISQTLSGHRDGIMTV--EWS-TSSEWILVTGGCDGAIRFWDIR 221
A T D ++L D + G +T +GH++ + +S T +WI V+G D + W+++
Sbjct: 205 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI-VSGSEDNLVYIWNLQ 263
Score = 110 (43.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 140 MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ F + G + + + +A+ + D +++ G +T+SGH+ GI V WS
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 70
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ S +LV+ D ++ WD+ C + L
Sbjct: 71 SDSN-LLVSASDDKTLKIWDVSSGKCLKTL 99
Score = 88 (36.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+ + DG ++S+ D R+WD SG+ TL++ + + K +
Sbjct: 143 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK----FSP 198
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCC--FS-SQDQELYTGGNDRQIL 416
++ +K +D GK T+ GH C FS + + + +G D +
Sbjct: 199 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 258
Query: 417 VW 418
+W
Sbjct: 259 IW 260
Score = 70 (29.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
A+ TL+GH + +V++S + EW L + D I+ W
Sbjct: 10 ALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW 46
Score = 45 (20.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
+++ +S HK I+ + ++ L+S + D ++ ++DV
Sbjct: 53 FEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDV 90
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 113 PVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMSPLAASHMLIAAGTEDVQ 171
P T + GS DH V++WD R++ ++++ V + P + + L+ A + D
Sbjct: 196 PNGTCIASAGS-DHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHP--SGNSLVTASS-DGT 251
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
V++ D+ G + TL GH + TV +S E + +GG D + W
Sbjct: 252 VKILDLVEGRLIYTLQGHTGPVFTVSFSKDGE-LFTSGGADAQVLVW 297
Score = 115 (45.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVK 374
+G + SAGSD +R+WD+ R L+ V + + + ++V VK
Sbjct: 197 NGTCIASAGSDHAVRIWDIRMNR--LLQHYQVHSCGVNCLSFHPSGN-SLVTASSDGTVK 253
Query: 375 AFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYT-GGNDRQILVW 418
D+ G+ T +GH V FS +D EL+T GG D Q+LVW
Sbjct: 254 ILDLVEGRLIYTLQGHTGPVFTVSFS-KDGELFTSGGADAQVLVW 297
Score = 92 (37.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GHK AI+SA + P + T S+D ++ +W + + K T++ +
Sbjct: 16 GHKAAITSADFSP-NCKQIATASWDTFLMLWSLKPHARAYRY-VGHKDVVTSLQ-FSPQG 72
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L+A+ + D VRL + S H + +V++S ++ LVT D +I+ W +
Sbjct: 73 NLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQF-LVTASEDKSIKVWSM 131
Query: 221 RR 222
R
Sbjct: 132 YR 133
Score = 60 (26.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
IA + D + L + A + GH+D + ++++S +L + D +R W + R
Sbjct: 33 IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN-LLASASRDKTVRLWVLDR 91
Query: 223 AG 224
G
Sbjct: 92 KG 93
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH + ++P ++ TGS D V++W N R+ + G V A SP
Sbjct: 424 GHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR--GPVLSLAFSP-- 478
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
L +AG ED +++L D+ASG + + L GH D I ++ +S S ++ + D ++R
Sbjct: 479 NGKYLASAG-EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSG-LIASASMDNSVRV 536
Query: 218 WDIRRAGCFRVLDQSQSQL 236
WDIR C D S S+L
Sbjct: 537 WDIRNTYCSAPADGSSSEL 555
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK IS W D+ L V+ S D +K+WD + + + K V+ +P +
Sbjct: 85 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN- 142
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D VR+ D+ +G +TL H D + V ++ ++V+ DG R WD
Sbjct: 143 --LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWD 199
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 200 TASGQCLKTL 209
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE-TVRLQTSKPIQLATTQD 361
H AV+ +K + +G +L S+ +D I++W G+ FE T+ +A + D
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSD 98
Query: 362 P-AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+V +K +D+ SGK T +GH YV CC F+ Q + +G D + +W
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 112 (44.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 108 SAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIA 164
SA+ + D L V+ SYD ++WDT C + +++ P V SP + I
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSP---NGKYIL 230
Query: 165 AGTEDVQVRLCDIASGAISQTLSGHRDGIMTV--EWS-TSSEWILVTGGCDGAIRFWDIR 221
A T D ++L D + G +T +GH++ + +S T +WI V+G D + W+++
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI-VSGSEDNLVYIWNLQ 289
Score = 110 (43.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 140 MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ F + G + + + +A+ + D +++ G +T+SGH+ GI V WS
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ S +LV+ D ++ WD+ C + L
Sbjct: 97 SDSN-LLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 88 (36.0 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+ + DG ++S+ D R+WD SG+ TL++ + + K +
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK----FSP 224
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCC--FS-SQDQELYTGGNDRQIL 416
++ +K +D GK T+ GH C FS + + + +G D +
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 417 VW 418
+W
Sbjct: 285 IW 286
Score = 70 (29.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
A+ TL+GH + +V++S + EW L + D I+ W
Sbjct: 36 ALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW 72
Score = 45 (20.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
+++ +S HK I+ + ++ L+S + D ++ ++DV
Sbjct: 79 FEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDV 116
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK IS W D+ L V+ S D +K+WD + + + K V+ +P +
Sbjct: 85 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN- 142
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D VR+ D+ +G +TL H D + V ++ ++V+ DG R WD
Sbjct: 143 --LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWD 199
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 200 TASGQCLKTL 209
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE-TVRLQTSKPIQLATTQD 361
H AV+ +K + +G +L S+ +D I++W G+ FE T+ +A + D
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSD 98
Query: 362 P-AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+V +K +D+ SGK T +GH YV CC F+ Q + +G D + +W
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 112 (44.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 108 SAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIA 164
SA+ + D L V+ SYD ++WDT C + +++ P V SP + I
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSP---NGKYIL 230
Query: 165 AGTEDVQVRLCDIASGAISQTLSGHRDGIMTV--EWS-TSSEWILVTGGCDGAIRFWDIR 221
A T D ++L D + G +T +GH++ + +S T +WI V+G D + W+++
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI-VSGSEDNLVYIWNLQ 289
Score = 110 (43.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 140 MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ F + G + + + +A+ + D +++ G +T+SGH+ GI V WS
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ S +LV+ D ++ WD+ C + L
Sbjct: 97 SDSN-LLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 88 (36.0 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+ + DG ++S+ D R+WD SG+ TL++ + + K +
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK----FSP 224
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCC--FS-SQDQELYTGGNDRQIL 416
++ +K +D GK T+ GH C FS + + + +G D +
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 417 VW 418
+W
Sbjct: 285 IW 286
Score = 70 (29.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
A+ TL+GH + +V++S + EW L + D I+ W
Sbjct: 36 ALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW 72
Score = 45 (20.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
+++ +S HK I+ + ++ L+S + D ++ ++DV
Sbjct: 79 FEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDV 116
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK IS W D+ L V+ S D +K+WD + + + K V+ +P +
Sbjct: 85 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN- 142
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D VR+ D+ +G +TL H D + V ++ ++V+ DG R WD
Sbjct: 143 --LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWD 199
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 200 TASGQCLKTL 209
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE-TVRLQTSKPIQLATTQD 361
H AV+ +K + +G +L S+ +D I++W G+ FE T+ +A + D
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSD 98
Query: 362 P-AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+V +K +D+ SGK T +GH YV CC F+ Q + +G D + +W
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 112 (44.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 108 SAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIA 164
SA+ + D L V+ SYD ++WDT C + +++ P V SP + I
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSP---NGKYIL 230
Query: 165 AGTEDVQVRLCDIASGAISQTLSGHRDGIMTV--EWS-TSSEWILVTGGCDGAIRFWDIR 221
A T D ++L D + G +T +GH++ + +S T +WI V+G D + W+++
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI-VSGSEDNLVYIWNLQ 289
Score = 110 (43.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 140 MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ F + G + + + +A+ + D +++ G +T+SGH+ GI V WS
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ S +LV+ D ++ WD+ C + L
Sbjct: 97 SDSN-LLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 88 (36.0 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+ + DG ++S+ D R+WD SG+ TL++ + + K +
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK----FSP 224
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCC--FS-SQDQELYTGGNDRQIL 416
++ +K +D GK T+ GH C FS + + + +G D +
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 417 VW 418
+W
Sbjct: 285 IW 286
Score = 70 (29.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
A+ TL+GH + +V++S + EW L + D I+ W
Sbjct: 36 ALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW 72
Score = 45 (20.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
+++ +S HK I+ + ++ L+S + D ++ ++DV
Sbjct: 79 FEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDV 116
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK IS W D+ L V+ S D +K+WD + + + K V+ +P +
Sbjct: 85 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN- 142
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D VR+ D+ +G +TL H D + V ++ ++V+ DG R WD
Sbjct: 143 --LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWD 199
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 200 TASGQCLKTL 209
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE-TVRLQTSKPIQLATTQD 361
H AV+ +K + +G +L S+ +D I++W G+ FE T+ +A + D
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSD 98
Query: 362 P-AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+V +K +D+ SGK T +GH YV CC F+ Q + +G D + +W
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 112 (44.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 108 SAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIA 164
SA+ + D L V+ SYD ++WDT C + +++ P V SP + I
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSP---NGKYIL 230
Query: 165 AGTEDVQVRLCDIASGAISQTLSGHRDGIMTV--EWS-TSSEWILVTGGCDGAIRFWDIR 221
A T D ++L D + G +T +GH++ + +S T +WI V+G D + W+++
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI-VSGSEDNLVYIWNLQ 289
Score = 110 (43.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 140 MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ F + G + + + +A+ + D +++ G +T+SGH+ GI V WS
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ S +LV+ D ++ WD+ C + L
Sbjct: 97 SDSN-LLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 88 (36.0 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+ + DG ++S+ D R+WD SG+ TL++ + + K +
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK----FSP 224
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCC--FS-SQDQELYTGGNDRQIL 416
++ +K +D GK T+ GH C FS + + + +G D +
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 417 VW 418
+W
Sbjct: 285 IW 286
Score = 70 (29.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
A+ TL+GH + +V++S + EW L + D I+ W
Sbjct: 36 ALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW 72
Score = 45 (20.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
+++ +S HK I+ + ++ L+S + D ++ ++DV
Sbjct: 79 FEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDV 116
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK IS W D+ L V+ S D +K+WD + + + K V+ +P +
Sbjct: 85 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN- 142
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D VR+ D+ +G +TL H D + V ++ ++V+ DG R WD
Sbjct: 143 --LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWD 199
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 200 TASGQCLKTL 209
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE-TVRLQTSKPIQLATTQD 361
H AV+ +K + +G +L S+ +D I++W G+ FE T+ +A + D
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSD 98
Query: 362 P-AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+V +K +D+ SGK T +GH YV CC F+ Q + +G D + +W
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 112 (44.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 108 SAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIA 164
SA+ + D L V+ SYD ++WDT C + +++ P V SP + I
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSP---NGKYIL 230
Query: 165 AGTEDVQVRLCDIASGAISQTLSGHRDGIMTV--EWS-TSSEWILVTGGCDGAIRFWDIR 221
A T D ++L D + G +T +GH++ + +S T +WI V+G D + W+++
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI-VSGSEDNLVYIWNLQ 289
Score = 110 (43.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 140 MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ F + G + + + +A+ + D +++ G +T+SGH+ GI V WS
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ S +LV+ D ++ WD+ C + L
Sbjct: 97 SDSN-LLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 88 (36.0 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+ + DG ++S+ D R+WD SG+ TL++ + + K +
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK----FSP 224
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCC--FS-SQDQELYTGGNDRQIL 416
++ +K +D GK T+ GH C FS + + + +G D +
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 417 VW 418
+W
Sbjct: 285 IW 286
Score = 70 (29.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
A+ TL+GH + +V++S + EW L + D I+ W
Sbjct: 36 ALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW 72
Score = 45 (20.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
+++ +S HK I+ + ++ L+S + D ++ ++DV
Sbjct: 79 FEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDV 116
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 125 (49.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/128 (28%), Positives = 57/128 (44%)
Query: 109 AIWYPVDTG-LFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIA 164
++ YP L V+ YDH ++ W+ C+R + + +V R +SP L A
Sbjct: 2 SVQYPPQHSVLLVSSGYDHTIRFWEALSGICSRTIQH--ADSQVNRLCISP--DKKFLAA 57
Query: 165 AGTEDVQVRLCDI--ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
AG VRL DI +S T GH + + + + +W L T DG ++ WD+R
Sbjct: 58 AGNP--HVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKW-LATSSEDGTVKVWDMRA 114
Query: 223 AGCFRVLD 230
R D
Sbjct: 115 PSVQRNYD 122
Score = 74 (31.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/118 (20%), Positives = 48/118 (40%)
Query: 307 VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVF 366
++ + V DG L++ + +W + + + + V+ Q + P V
Sbjct: 170 MSSITVGSDGSMLIAGNNKGNCYVWRMLNHQGASLLQPVVKFQAHQRYITRCVLSPDVKH 229
Query: 367 VPCMTAVKAFDIWSGKTCLTF------RGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ +A +IWS + ++F +GH +V C FS+ L T +D +W
Sbjct: 230 LATCSADATVNIWSTED-MSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLW 286
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 157 (60.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GHK IS W D+ L V+ S D +K+WD + + + K V+ +P +
Sbjct: 85 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN- 142
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D VR+ D+ +G +TL H D + V ++ ++V+ DG R WD
Sbjct: 143 --LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWD 199
Query: 220 IRRAGCFRVL 229
C + L
Sbjct: 200 TASGQCLKTL 209
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE-TVRLQTSKPIQLATTQD 361
H AV+ +K + +G +L S+ +D I++W G+ FE T+ +A + D
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSD 98
Query: 362 P-AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+V +K +D+ SGK T +GH YV CC F+ Q + +G D + +W
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Score = 110 (43.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 140 MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS 199
+ F + G + + + +A+ + D +++ G +T+SGH+ GI V WS
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ S +LV+ D ++ WD+ C + L
Sbjct: 97 SDSN-LLVSASDDKTLKIWDVSSGKCLKTL 125
Score = 79 (32.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 27/122 (22%), Positives = 50/122 (40%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLVNFETVRLQTSKPIQLATT 359
AH V+ + DG ++S+ D R+WD SG+ TL++ + + K +
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK----FSP 224
Query: 360 QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCC--FS-SQDQELYTGGNDRQIL 416
++ +K +D GK T+ H C FS + + + +G D +
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 417 VW 418
+W
Sbjct: 285 IW 286
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 304 YGAVTGLKVTEDGMYLLSAGSDSRIRLWDVES 335
Y VT G +++S D+ + +W++++
Sbjct: 260 YCIFANFSVT-GGKWIVSGSEDNLVYIWNLQT 290
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 162 (62.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 63/230 (27%), Positives = 103/230 (44%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-- 77
N +K STL+ K I++ H GS+ LQ D ER +++G+SDS+V V+DV
Sbjct: 323 NTIKIWDKSTLEC---KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNAGEML 376
Query: 78 -------------DYEGGGHI--AKHRSVFVVDKQHEH---------GHKYAISSAIWYP 113
+ G + +K RS+ V D GH+ A++ +
Sbjct: 377 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 434
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D V+ S D +KVW+T+ V G ++ ++ L L+ +G+ D +R
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIR 489
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
L DI GA + L GH + + + + +V+G DG I+ WD+ A
Sbjct: 490 LWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAA 536
Score = 137 (53.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 115 DTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G+ VT S D + VWD + T + + + G +R A++ + I + + D ++
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIK 449
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
+ + ++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GH 505
Query: 234 SQLGRRPPLLKRKSLSAGQNSSVK 257
+L R ++ +S + +K
Sbjct: 506 EELVRCIRFDNKRIVSGAYDGKIK 529
Score = 90 (36.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD + C R++ G V L +I G+ D
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHT--GSVLC-----LQYDERVIITGSSDST 364
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + ++ ++VT D +I WD+
Sbjct: 365 VRVWDVNAGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 410
Score = 87 (35.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W+ + E VR +A Q
Sbjct: 425 HRAAVN--VVDFDDKYIVSASGDRTIKVWNTST-------CEFVRTLNGHKRGIACLQYR 475
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 531
Score = 43 (20.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+ + + T+ L+T
Sbjct: 515 DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRT 550
Score = 40 (19.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 554 HSGRVFRLQFDE--FQIVSSSHDDTILIWD 581
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 162 (62.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 63/230 (27%), Positives = 103/230 (44%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-- 77
N +K STL+ K I++ H GS+ LQ D ER +++G+SDS+V V+DV
Sbjct: 323 NTIKIWDKSTLEC---KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNAGEML 376
Query: 78 -------------DYEGGGHI--AKHRSVFVVDKQHEH---------GHKYAISSAIWYP 113
+ G + +K RS+ V D GH+ A++ +
Sbjct: 377 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 434
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D V+ S D +KVW+T+ V G ++ ++ L L+ +G+ D +R
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIR 489
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
L DI GA + L GH + + + + +V+G DG I+ WD+ A
Sbjct: 490 LWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAA 536
Score = 137 (53.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 115 DTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G+ VT S D + VWD + T + + + G +R A++ + I + + D ++
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIK 449
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
+ + ++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GH 505
Query: 234 SQLGRRPPLLKRKSLSAGQNSSVK 257
+L R ++ +S + +K
Sbjct: 506 EELVRCIRFDNKRIVSGAYDGKIK 529
Score = 90 (36.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD + C R++ G V L +I G+ D
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHT--GSVLC-----LQYDERVIITGSSDST 364
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + ++ ++VT D +I WD+
Sbjct: 365 VRVWDVNAGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 410
Score = 87 (35.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W+ + E VR +A Q
Sbjct: 425 HRAAVN--VVDFDDKYIVSASGDRTIKVWNTST-------CEFVRTLNGHKRGIACLQYR 475
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 531
Score = 43 (20.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+ + + T+ L+T
Sbjct: 515 DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRT 550
Score = 40 (19.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 554 HSGRVFRLQFDE--FQIVSSSHDDTILIWD 581
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 161 (61.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 41/126 (32%), Positives = 61/126 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH ++ ++P ++ TGS D V++WD NC R+ K G ++ A SP
Sbjct: 605 GHLADVTCTRFHP-NSNYIATGSADRTVRLWDVLNGNCVRIFTGHK--GPIHSLAFSP-- 659
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ +A G D +V L DI G + L GH D I + +S E IL +G D +R
Sbjct: 660 -NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGE-ILASGSMDNTVRL 717
Query: 218 WDIRRA 223
WD +A
Sbjct: 718 WDAVKA 723
Score = 94 (38.1 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMSPLAA 158
+GH + + P D ++ S D V++W ++ +K V+ T SP
Sbjct: 520 YGHSGPVYGTSFSP-DRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG- 577
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+ ++ G + V RL + +GH + + +S +I TG D +R W
Sbjct: 578 -YYFVSGGHDRV-ARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYI-ATGSADRTVRLW 634
Query: 219 DIRRAGCFRV 228
D+ C R+
Sbjct: 635 DVLNGNCVRI 644
Score = 72 (30.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
T H G + L + +G +L + +D R+ LWD+ G
Sbjct: 646 TGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHG 681
Score = 47 (21.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEG-GGH 84
+I+ H G + + YLLS + D +V ++ +Q T G GH
Sbjct: 517 KILYGHSGPVYGTSFS-PDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGH 564
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 160 (61.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 62/227 (27%), Positives = 102/227 (44%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-- 77
N +K STL+ K I++ H GS+ LQ D ER +++G+SDS+V V+DV
Sbjct: 224 NTIKIWDKSTLEC---KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEML 277
Query: 78 -------------DYEGGGHI--AKHRSVFVVDKQHEH---------GHKYAISSAIWYP 113
+ G + +K RS+ V D GH+ A++ +
Sbjct: 278 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 335
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D V+ S D +KVW+T+ V G ++ ++ L L+ +G+ D +R
Sbjct: 336 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIR 390
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L DI GA + L GH + + + + +V+G DG I+ WD+
Sbjct: 391 LWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDL 434
Score = 137 (53.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 115 DTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G+ VT S D + VWD + T + + + G +R A++ + I + + D ++
Sbjct: 293 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIK 350
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
+ + ++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+
Sbjct: 351 VWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GH 406
Query: 234 SQLGRRPPLLKRKSLSAGQNSSVK 257
+L R ++ +S + +K
Sbjct: 407 EELVRCIRFDNKRIVSGAYDGKIK 430
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD + C R++ G V L +I G+ D
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHT--GSVLC-----LQYDERVIITGSSDST 265
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + ++ ++VT D +I WD+
Sbjct: 266 VRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 311
Score = 87 (35.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W+ + E VR +A Q
Sbjct: 326 HRAAVN--VVDFDDKYIVSASGDRTIKVWNTST-------CEFVRTLNGHKRGIACLQYR 376
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 377 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 432
Score = 42 (19.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+ + + T+ L+T
Sbjct: 416 DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRT 451
Score = 40 (19.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 455 HSGRVFRLQFDE--FQIVSSSHDDTILIWD 482
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 148 (57.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 42/160 (26%), Positives = 80/160 (50%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS-- 159
H+ A++ ++PV T L +GS D +K+WD + K G + +
Sbjct: 113 HRDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLK--GHIRGVSGLDYGGQKG 169
Query: 160 HMLIAAGTEDVQVRLCDIASG-AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+ L+A+ + D+ ++L D + A +TLSGH + +V + TS++ L++ DG +R W
Sbjct: 170 NTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIW 229
Query: 219 DIRRAGCFRVLDQS-QSQLGRRPPLLKRKSL-SAGQNSSV 256
D+ C +V+ + +S + P K L S G++ ++
Sbjct: 230 DVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAI 269
Score = 53 (23.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 366 FVPCMTAVKAFDIWS--GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
FV K +W G+ T GH +V F + L++ +D+ I W
Sbjct: 322 FVATGARDKTIKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCW 376
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 148 (57.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 42/160 (26%), Positives = 80/160 (50%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS-- 159
H+ A++ ++PV T L +GS D +K+WD + K G + +
Sbjct: 113 HRDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLK--GHIRGVSGLDYGGQKG 169
Query: 160 HMLIAAGTEDVQVRLCDIASG-AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+ L+A+ + D+ ++L D + A +TLSGH + +V + TS++ L++ DG +R W
Sbjct: 170 NTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIW 229
Query: 219 DIRRAGCFRVLDQS-QSQLGRRPPLLKRKSL-SAGQNSSV 256
D+ C +V+ + +S + P K L S G++ ++
Sbjct: 230 DVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAI 269
Score = 53 (23.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 366 FVPCMTAVKAFDIWS--GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
FV K +W G+ T GH +V F + L++ +D+ I W
Sbjct: 322 FVATGARDKTIKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCW 376
>UNIPROTKB|G4MTR1 [details] [associations]
symbol:MGG_04746 "DOM34-interacting protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_003713707.1
ProteinModelPortal:G4MTR1 EnsemblFungi:MGG_04746T0 GeneID:2678069
KEGG:mgr:MGG_04746 Uniprot:G4MTR1
Length = 968
Score = 101 (40.6 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 36/168 (21%), Positives = 69/168 (41%)
Query: 54 TEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP 113
T++ L+ G +++ + ++ V D E GH+ I AI
Sbjct: 382 TKDLQLVVGTTNNQIELWHVTTTKDKEKKSKKENAEDYTRALSIELPGHRADIR-AIALS 440
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D + T + + +K+W+ + F+ G A P ++ GT+ ++
Sbjct: 441 SDDRMLATAA-NGSLKIWNVRTQACIRTFEC-GYALCCAFLP---GDKVVVVGTKTGELE 495
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
L D+AS A+ +++ H I ++ + VTG D + +FWD R
Sbjct: 496 LFDVASTALLDSVTAHDGAIWSLHVHPDGRSV-VTGSADKSAKFWDFR 542
Score = 96 (38.9 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 25/103 (24%), Positives = 52/103 (50%)
Query: 93 VVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA 152
++ + + K +++ D +F G D +++WD+ ++++F G +RTA
Sbjct: 57 LLSRWQDEKSKAQVTAIAQSKTDRDVFAVGYEDGSIRLWDSKIATIIVSFN--G--HRTA 112
Query: 153 MSPLA--ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGI 193
++ LA S +A+G++D V + D+ + L GH+D I
Sbjct: 113 ITHLAFDKSGTRLASGSKDTDVIVWDLVAEVGQYKLRGHKDQI 155
Score = 87 (35.7 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 37/133 (27%), Positives = 55/133 (41%)
Query: 298 DRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--------SGRNT--LVNFETVR 347
D TAH GA+ L V DG +++ +D + WD + R T L +T
Sbjct: 506 DSVTAHDGAIWSLHVHPDGRSVVTGSADKSAKFWDFRIVQEPVLGTTRTTPKLKLVQTRV 565
Query: 348 LQTSKPI-QLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 405
L+ S I L + D ++ V + + VK F S K L GH V S +
Sbjct: 566 LKVSDDILSLKFSPDAKMLAVALLDSTVKVFFADSLKLYLNLYGHKLPVLSMDISYDSKL 625
Query: 406 LYTGGNDRQILVW 418
+ T D+ I +W
Sbjct: 626 IITSSADKNIKIW 638
Score = 76 (31.8 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 27/87 (31%), Positives = 37/87 (42%)
Query: 246 KSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYG 305
KSL G SV A +A GNG S +K V + R H+G
Sbjct: 647 KSLF-GHQDSVLQVAFIPHNAEGNGHHFFST----SKDRVIKYWDGDKFEQIQRLHGHHG 701
Query: 306 AVTGLKVTEDGMYLLSAGSDSRIRLWD 332
V L V+ G +++SA D IR+W+
Sbjct: 702 EVWALAVSHSGNFIVSASHDKSIRVWE 728
Score = 75 (31.5 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 25/96 (26%), Positives = 43/96 (44%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYD-VQRATDYEGGGHIAKHRSVFVVDKQHEH 100
H+ +I L D + R L SG+ D+ V V+D V Y+ GH + + ++ + +
Sbjct: 109 HRTAITHLAFDKSGTR-LASGSKDTDVIVWDLVAEVGQYKLRGHKDQITGLCFIEPEPQT 167
Query: 101 GHKYAISSAIWYPVDT----GLFVTGSYDHYVKVWD 132
+ A VD G +T + D +K+WD
Sbjct: 168 AEQEDAEEAQAMVVDNEGSEGFLLTTAKDSLIKLWD 203
Score = 73 (30.8 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230
A+S L GHR I + S S + +L T +G+++ W++R C R +
Sbjct: 422 ALSIELPGHRADIRAIALS-SDDRMLATAA-NGSLKIWNVRTQACIRTFE 469
Score = 54 (24.1 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 21/118 (17%), Positives = 44/118 (37%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG--RNTLVNFETVRLQTSKPIQLATTQ 360
H V + ++ D ++++ +D I++W ++ G +L + LQ + A
Sbjct: 610 HKLPVLSMDISYDSKLIITSSADKNIKIWGLDFGDCHKSLFGHQDSVLQVAFIPHNAEGN 669
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+K +D + GH+ V S + + +D+ I VW
Sbjct: 670 GHHFFSTSKDRVIKYWDGDKFEQIQRLHGHHGEVWALAVSHSGNFIVSASHDKSIRVW 727
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/135 (29%), Positives = 66/135 (48%)
Query: 102 HKYAISSAIWYPVDTG-LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
H +SS + TG L TG D V VW N VM+ + G ++A
Sbjct: 19 HSSNVSSLV-LGKSTGRLLATGGDDCRVNVWSVNKPNCVMS--LTGHTTPIESLQISAKE 75
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
LI AG++ +R+ D+ + I +TL GH+ I ++++ ++ +G D I+ WD+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDV 134
Query: 221 RRAGC-FRVLDQSQS 234
RR GC F+ +Q+
Sbjct: 135 RRKGCIFKYKSHTQA 149
Score = 149 (57.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/124 (31%), Positives = 62/124 (50%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD + +K + R SP
Sbjct: 103 GHKANICSLDFHPY--GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + +GH + VE+ S E++L +G D IRFW
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPS-EYLLASGSSDRTIRFW 216
Query: 219 DIRR 222
D+ +
Sbjct: 217 DLEK 220
Score = 57 (25.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H I SLQ+ EE +++G+ S+ V+D++ A
Sbjct: 62 HTTPIESLQISAKEE-LIVAGSQSGSIRVWDLEAA 95
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 109 (43.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
+GHK AI++ + Y G +GS D + VWD + K A+ L
Sbjct: 104 NGHKAAITT-LKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALF-LREK 161
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
++L+ +G +D V+ D+ + +T+ GHR + + S E L+TG D +R WD
Sbjct: 162 NLLVTSG-KDTMVKWWDLDTQHCFKTMVGHRTEVWGLVL-LSEEKRLITGASDSELRVWD 219
Query: 220 I 220
I
Sbjct: 220 I 220
Score = 103 (41.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 42/160 (26%), Positives = 67/160 (41%)
Query: 270 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIR 329
G RQ +G K + +L + D AH GA+ + ++ D ++ G+D ++
Sbjct: 465 GDRQVVIGTKTGKLQLYDLASGNLLETID---AHDGALWSMSLSPDQRGFVTGGADKSVK 521
Query: 330 LWDVE------SGRNTLVNFETVRLQTSKPIQLATTQDP-----AVVFVPCMTAVKAFDI 378
WD E S + L +T LQ + + L + P AV + C VK F +
Sbjct: 522 FWDFELVKDENSTQKRLSVKQTRTLQLDEDV-LCVSYSPNQKLLAVSLLDC--TVKIFYV 578
Query: 379 WSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ K L+ GH V C S + TG DR + +W
Sbjct: 579 DTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIW 618
Score = 100 (40.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 23/93 (24%), Positives = 47/93 (50%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
+A+G++D + + D+ + + L GH+D I + +LVT G D +++WD+
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKN-LLVTSGKDTMVKWWDLDT 180
Query: 223 AGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSS 255
CF+ + ++++ L + K L G + S
Sbjct: 181 QHCFKTMVGHRTEVWGLVLLSEEKRLITGASDS 213
Score = 100 (40.3 bits), Expect = 0.00096, Sum P(2) = 0.00095
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPL 156
+GHK + + D L TGS D VK+W + C + + F V P
Sbjct: 588 YGHKLPVI-CMDISHDGALIATGSADRNVKIWGLDFGDCHKSL--FAHDDSVMYLQFVP- 643
Query: 157 AASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
SH+ AG +D +++ D QTL GH I + S S +++ V+ D ++R
Sbjct: 644 -KSHLFFTAG-KDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYV-VSSSHDKSLR 700
Query: 217 FWDIRR 222
W+ R
Sbjct: 701 LWERTR 706
Score = 97 (39.2 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTS---SEWILVTGGCDGAIRFWD 219
+ GT+ +++L D+ASG + +T+ H DG + WS S + VTGG D +++FWD
Sbjct: 469 VVIGTKTGKLQLYDLASGNLLETIDAH-DGAL---WSMSLSPDQRGFVTGGADKSVKFWD 524
Score = 94 (38.1 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 36/147 (24%), Positives = 69/147 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G +V +V +WD ++ + G K T + P + + +A G ED +R
Sbjct: 34 EKGRYVAVPACEHVFIWDLRKGEKILILQ--GLKQEVTCLCP-SPDGLHLAVGYEDGSIR 90
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD-IRRAGCFRVLDQS 232
+ + SG + T +GH+ I T+++ L +G D I WD I +G +R+ +
Sbjct: 91 IFSLLSGEGNVTFNGHKAAITTLKYDQLGGR-LASGSKDTDIIVWDVINESGLYRL--KG 147
Query: 233 QSQLGRRPPLLKRKSL--SAGQNSSVK 257
+ L+ K+L ++G+++ VK
Sbjct: 148 HKDAITQALFLREKNLLVTSGKDTMVK 174
Score = 79 (32.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 29/116 (25%), Positives = 48/116 (41%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V L + D + +LSA +DS I++W+ R+TL T+ + + D
Sbjct: 414 HRSDVRTLSFSSDNIAVLSAAADS-IKIWN----RSTLQCIRTMTCEYAL-CSFFVPGDR 467
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
VV ++ +D+ SG T H + S + TGG D+ + W
Sbjct: 468 QVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFW 523
Score = 67 (28.6 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD-YEGGGHI-AKHRSVFVVDKQH- 98
HK +I +L+ D R L SG+ D+ + V+DV + Y GH A +++F+ +K
Sbjct: 106 HKAAITTLKYDQLGGR-LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLL 164
Query: 99 -EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVW 131
G + W+ +DT H +VW
Sbjct: 165 VTSGKDTMVK---WWDLDTQHCFKTMVGHRTEVW 195
Score = 67 (28.6 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYE 80
+K +V H+ + L V L+EE+ L++GASDS + V+D+ + E
Sbjct: 184 FKTMVG-HRTEVWGL-VLLSEEKRLITGASDSELRVWDIAYLQEIE 227
Score = 61 (26.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQ--LATTQ 360
H+ + L V+ G Y++S+ D +RLW E R L+ E ++ + +A
Sbjct: 674 HHQEIWCLAVSPSGDYVVSSSHDKSLRLW--ERTREPLILEEEREMEREAEYEESVAKED 731
Query: 361 DPAV 364
PAV
Sbjct: 732 QPAV 735
Score = 60 (26.2 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
T+ GHR + T+ S SS+ I V +I+ W+ C R +
Sbjct: 410 TIGGHRSDVRTL--SFSSDNIAVLSAAADSIKIWNRSTLQCIRTM 452
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 18/117 (15%), Positives = 46/117 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V + ++ DG + + +D +++W ++ G +++ + L
Sbjct: 590 HKLPVICMDISHDGALIATGSADRNVKIWGLDFGDC----HKSLFAHDDSVMYLQFVPKS 645
Query: 363 AVVFVPCMT-AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ F +K +D + T GH++ + C S + + +D+ + +W
Sbjct: 646 HLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 49 (22.3 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
AH +V L+ +AG D +I+ WD +
Sbjct: 631 AHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDAD 663
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 43/139 (30%), Positives = 68/139 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH + ++P ++ TGS D V++W N R+ + G V A SP
Sbjct: 442 GHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR--GPVLSLAFSP-- 496
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
L +AG ED +++L D+ASG + + L GH D I ++ +S S ++ + D ++R
Sbjct: 497 NGKYLASAG-EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSS-LIASASMDNSVRV 554
Query: 218 WDIRRAGCFRVLDQSQSQL 236
WDIR C D S +L
Sbjct: 555 WDIRNTYCSTPADGSSGEL 573
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 160 (61.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 62/227 (27%), Positives = 102/227 (44%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-- 77
N +K STL+ K I++ H GS+ LQ D ER +++G+SDS+V V+DV
Sbjct: 287 NTIKIWDKSTLEC---KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEML 340
Query: 78 -------------DYEGGGHI--AKHRSVFVVDKQHEH---------GHKYAISSAIWYP 113
+ G + +K RS+ V D GH+ A++ +
Sbjct: 341 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 398
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D V+ S D +KVW+T+ V G ++ ++ L L+ +G+ D +R
Sbjct: 399 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIR 453
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L DI GA + L GH + + + + +V+G DG I+ WD+
Sbjct: 454 LWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDL 497
Score = 137 (53.3 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 115 DTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G+ VT S D + VWD + T + + + G +R A++ + I + + D ++
Sbjct: 356 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIK 413
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
+ + ++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+
Sbjct: 414 VWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GH 469
Query: 234 SQLGRRPPLLKRKSLSAGQNSSVK 257
+L R ++ +S + +K
Sbjct: 470 EELVRCIRFDNKRIVSGAYDGKIK 493
Score = 90 (36.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD + C R++ G V L +I G+ D
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHT--GSVLC-----LQYDERVIITGSSDST 328
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + ++ ++VT D +I WD+
Sbjct: 329 VRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 374
Score = 87 (35.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W+ + E VR +A Q
Sbjct: 389 HRAAVN--VVDFDDKYIVSASGDRTIKVWNTST-------CEFVRTLNGHKRGIACLQYR 439
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 440 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 495
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+ + + T+ L+T
Sbjct: 479 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 514
Score = 40 (19.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 518 HSGRVFRLQFDE--FQIVSSSHDDTILIWD 545
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 151 (58.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 43/137 (31%), Positives = 66/137 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-GKVYRTAMSPLAAS 159
GH + ++P ++ TGS D V++W V F G V A SP
Sbjct: 421 GHLAGVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSP--NG 477
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L++AG ED ++L D+ASG + + L GH D I +V +S S ++ + D ++R WD
Sbjct: 478 QYLVSAG-EDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSS-VIASASMDNSVRIWD 535
Query: 220 IRRAGCFRVLDQSQSQL 236
I+ D S S+L
Sbjct: 536 IKSKHNSTPADGSSSEL 552
Score = 53 (23.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD---YEGGGH------IA 86
++++ H G + S + L + LLS + D+S+ +D++ T+ Y+G + I+
Sbjct: 332 RKVLLGHCGPVYSTRF-LPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDIS 390
Query: 87 KHRSVFVVDKQHEH 100
H S+F ++H
Sbjct: 391 PH-SLFFASASYDH 403
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 115 (45.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 29/116 (25%), Positives = 52/116 (44%)
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA 178
F TG+ D +K+WD V+ + G + ++ H + + ED V+ D+
Sbjct: 178 FCTGAGDRTIKIWDL--ASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLE 235
Query: 179 SGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQS 234
+ + + GH G+ ++ + + +LVT G D R WD+R VL +S
Sbjct: 236 TNKVIRHYHGHLSGVYALKLHPTLD-VLVTAGRDAVARVWDMRTRQNVHVLSGHKS 290
Score = 89 (36.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/118 (25%), Positives = 49/118 (41%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ 360
+ H V L V E +++ DS IRLWD+ +G+ TL T +T + + L
Sbjct: 286 SGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGK-TLTTL-THHKKTVRALSLHP-- 341
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D +K + G F GH VN +S D +++G ++ + W
Sbjct: 342 DEFTFASGSSDNIKHWKFPEGAFMGNFEGHNAIVNTLSINS-DNVMFSGADNGSMCFW 398
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 182 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 231
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 232 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 291
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 292 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 341
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 182 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 231
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 232 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 291
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 292 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 341
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 155 (59.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GHK IS W D+ L + S D +K+WD ++V K K Y +S S+
Sbjct: 86 GHKEGISDIAWSQ-DSKLICSASDDKTIKIWDVESGKMVKTLK-GHKEYVFGVSFNPQSN 143
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
LI +G+ D VR+ D+ +G ++ +S H D + V ++ ++V+G DG +R WD
Sbjct: 144 -LIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGT-LVVSGSYDGTVRIWD 200
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 34/131 (25%), Positives = 68/131 (51%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH +ISS + P D + S D +K+W + F+ + ++ +S +A S
Sbjct: 44 GHLKSISSVKFSP-DGKWLASASADKTIKIWGAYDGK----FERTLEGHKEGISDIAWSQ 98
Query: 161 --MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
LI + ++D +++ D+ SG + +TL GH++ + V ++ S ++V+G D +R W
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSN-LIVSGSFDENVRIW 157
Query: 219 DIRRAGCFRVL 229
D+ C +++
Sbjct: 158 DVNTGECTKMI 168
Score = 134 (52.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 59/258 (22%), Positives = 104/258 (40%)
Query: 182 ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPP 241
+ TL GH I +V++S +W L + D I+ W R L+ + +
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKW-LASASADKTIKIWGAYDGKFERTLEGHKEGISDIAW 96
Query: 242 LLKRKSL-SAGQNSSVK----PRAPQKRSANGN-----GVRQSSVGRIPAKGSVRQRLHP 291
K + SA + ++K ++ G+ GV + + GS + +
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Query: 292 GMLSSQD---RATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRL 348
+++ + +AH VTG+ DG ++S D +R+WD +G+ L+N T+
Sbjct: 157 WDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQ--LLN--TIST 212
Query: 349 QTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS---GKTCL-TFRGHYEYVNCCCFSSQD- 403
+ K + P FV T +WS K CL T+ GH + C FS+
Sbjct: 213 EDGKEVSFVKFS-PNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGH-KNEKYCIFSTFSV 270
Query: 404 ---QELYTGGNDRQILVW 418
+ + TG D I ++
Sbjct: 271 TCGKWIVTGSEDNLIYIY 288
>UNIPROTKB|Q05048 [details] [associations]
symbol:CSTF1 "Cleavage stimulation factor subunit 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0003723 "RNA binding" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0006378 "mRNA polyadenylation"
evidence=TAS] [GO:0006379 "mRNA cleavage" evidence=TAS] [GO:0006396
"RNA processing" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006397 "mRNA processing"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CH471077 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 Reactome:REACT_1675 GO:GO:0006378
GO:GO:0003723 GO:GO:0000398 Pathway_Interaction_DB:bard1pathway
EMBL:AL121914 Reactome:REACT_1788 GO:GO:0006379 GO:GO:0006369
Reactome:REACT_78 EMBL:L02547 EMBL:BT007138 EMBL:AK312774
EMBL:BC001011 EMBL:BC007425 IPI:IPI00011528 PIR:A45142
RefSeq:NP_001028693.1 RefSeq:NP_001028694.1 RefSeq:NP_001315.1
UniGene:Hs.172865 ProteinModelPortal:Q05048 SMR:Q05048
IntAct:Q05048 STRING:Q05048 PhosphoSite:Q05048 DMDM:461848
REPRODUCTION-2DPAGE:IPI00011528 PaxDb:Q05048 PeptideAtlas:Q05048
PRIDE:Q05048 DNASU:1477 Ensembl:ENST00000217109
Ensembl:ENST00000415828 Ensembl:ENST00000452950 GeneID:1477
KEGG:hsa:1477 UCSC:uc002xxl.1 CTD:1477 GeneCards:GC20P054967
H-InvDB:HIX0015931 HGNC:HGNC:2483 HPA:CAB019270 MIM:600369
neXtProt:NX_Q05048 PharmGKB:PA26985 HOGENOM:HOG000234077
HOVERGEN:HBG051144 InParanoid:Q05048 KO:K14406 OMA:LYDHTDE
OrthoDB:EOG4868CD PhylomeDB:Q05048 GenomeRNAi:1477 NextBio:6065
ArrayExpress:Q05048 Bgee:Q05048 CleanEx:HS_CSTF1
Genevestigator:Q05048 GermOnline:ENSG00000101138 Uniprot:Q05048
Length = 431
Score = 109 (43.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 50/240 (20%), Positives = 100/240 (41%)
Query: 31 QLSNYKEI-VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGG-HIAKH 88
+ S Y+ V+ HKG + + + +G++D+S+ + D +R + +
Sbjct: 95 EASEYETCYVTSHKGPCRVATYS-RDGQLIATGSADASIKILDTERMLAKSAMPIEVMMN 153
Query: 89 RSVFVVDKQHE-----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK 143
+ + H + H ++ ++P + + +GS D+ +K++D + FK
Sbjct: 154 ETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQ-ILASGSRDYTLKLFDYSKPSAKRAFK 212
Query: 144 MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA--IS-QTLSGHRDGIMTVEWST 200
+ S I GT+ +RL DI + +S H D I +V +++
Sbjct: 213 YIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNS 272
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKS---LSAGQNSSVK 257
S+ + VTG DG I+ WD C +++ + + S LS+G++S K
Sbjct: 273 SAN-MYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAK 331
Score = 94 (38.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 33/124 (26%), Positives = 51/124 (41%)
Query: 302 AHYGA-VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKP--IQLAT 358
AH GA V +++ Y+LS+G DS +LW++ +GR TLV + L + Q
Sbjct: 303 AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGR-TLVRYTGAGLSGRQVHRTQAVF 361
Query: 359 TQDPAVVFVPCMTAVKAFDIWSGKTC----LTFRGHYEYVNCCCFSSQDQELYTGGNDRQ 414
V +P + + W +T L GH V C S + T +D +
Sbjct: 362 NHTEDYVLLPDERTI-SLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR 420
Query: 415 ILVW 418
W
Sbjct: 421 ARFW 424
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 49/193 (25%), Positives = 90/193 (46%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVY---------DVQRATDYEGGGHIAKHRSVF 92
H GS++++ VD + ++ SG+ D + ++ +++ AT+ + +
Sbjct: 188 HAGSVDAIAVDSSGAKFC-SGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLT 246
Query: 93 VVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRT- 151
GH AISS +W D + S+DH ++VWD + KV+
Sbjct: 247 RTPLVTLSGHTEAISSVLWS--DAEEICSASWDHTIRVWDVESGGLKSTLT-GNKVFNCI 303
Query: 152 AMSPLAASHMLIAAGTEDVQVRLCD--IASGA-ISQTLSGHRDGIMTVEWSTSSEWILVT 208
+ SPL +A+G+ D +RL D G+ +S +L+ H + +V+WS + E L++
Sbjct: 304 SYSPLCKR---LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLIS 360
Query: 209 GGCDGAIRFWDIR 221
G D ++ WD R
Sbjct: 361 GSLDNIVKLWDTR 373
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 49/193 (25%), Positives = 89/193 (46%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVY---------DVQRATDYEGGGHIAKHRSVF 92
H GS++++ VD + ++ SG+ D + ++ ++Q T+ + +
Sbjct: 188 HAGSVDAIAVDSSGTKFC-SGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLT 246
Query: 93 VVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRT- 151
GH AISS +W D + S+DH V+VWD + KV+
Sbjct: 247 RTPLVTLSGHTEAISSVLWSDADE--VCSASWDHTVRVWDVESGGLKSTLT-GNKVFNCI 303
Query: 152 AMSPLAASHMLIAAGTEDVQVRLCD--IASGA-ISQTLSGHRDGIMTVEWSTSSEWILVT 208
+ SPL +A+G+ D +RL D G+ +S +L+ H + +V+WS + + L++
Sbjct: 304 SYSPLCKR---LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLIS 360
Query: 209 GGCDGAIRFWDIR 221
G D ++ WD R
Sbjct: 361 GSLDNMVKLWDTR 373
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 134 (52.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 32/121 (26%), Positives = 64/121 (52%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ I S + + + V+GS D ++WD + ++ ++ V A+SP +
Sbjct: 400 GHEQDIYS-LDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISP---ND 455
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
IA G+ D +R+ + SG + + L GH++ + ++ +S S IL++G D I+ W++
Sbjct: 456 QFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSS-ILLSGSLDKTIKVWEL 513
Query: 221 R 221
+
Sbjct: 514 Q 514
Score = 109 (43.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
+ GTED Q++L D+++ + SGH I ++++S + +I V+G D R WD+
Sbjct: 375 LVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFI-VSGSGDRTARLWDVET 433
Query: 223 AGCFRVLD 230
C L+
Sbjct: 434 GQCILKLE 441
Score = 98 (39.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 37/164 (22%), Positives = 73/164 (44%)
Query: 269 NGVRQSSVG---RIPAKGSVRQRLHPGMLSSQ--DRATAHYGAVTGLKVTEDGMYLLSAG 323
NGV ++ + A GS+ Q + +S +R H +V + + D LLS
Sbjct: 444 NGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGS 503
Query: 324 SDSRIRLWDVESGRN---TLVNFE-----TVRLQTSKPIQLATTQDPAVVFVPCMT-AVK 374
D I++W++++ R+ + + E T T + +A + D +++
Sbjct: 504 LDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQ 563
Query: 375 AFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+D+ +G++ LT +GH V CFS ++ +G D + +W
Sbjct: 564 FWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Score = 95 (38.5 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 39/166 (23%), Positives = 71/166 (42%)
Query: 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116
+YL +G + ++ V+DVQ + +F + ++ + I + D
Sbjct: 326 KYLATGCNQAA-NVFDVQTG------------KKLFTLHEESPDPSRDLYVRTIAFSPDG 372
Query: 117 GLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH--MLIAAGTEDVQVRL 174
VTG+ D +K+WD + +V + G + + L SH I +G+ D RL
Sbjct: 373 KYLVTGTEDRQIKLWDLSTQKV--RYVFSG--HEQDIYSLDFSHNGRFIVSGSGDRTARL 428
Query: 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
D+ +G L +G+ + S + ++I V G D IR W +
Sbjct: 429 WDVETGQCILKLE-IENGVTAIAISPNDQFIAV-GSLDQIIRVWSV 472
Score = 51 (23.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
H +V + + DG S D R R+W ++
Sbjct: 579 HKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 111 (44.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
+GHK A++S + Y G +GS D V +WD + K A+ L
Sbjct: 104 NGHKAAVTS-LKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALF-LRER 161
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
++L+ +G +D V+ D+ + +T+ GHR + + S E L+TG D +R WD
Sbjct: 162 NLLVTSG-KDTMVKWWDLDNQHCFKTMVGHRTEVWGLVL-VSEEKRLITGAADSELRAWD 219
Query: 220 I 220
I
Sbjct: 220 I 220
Score = 108 (43.1 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ + + + + D ++ + D +K+W+ + + + MP + Y S
Sbjct: 412 GHRSDVRT-LSFSSDNIAVLSAAADS-IKIWNRSTLQCIRT--MPCE-YALC-SFFVPGD 465
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTS---SEWILVTGGCDGAIRF 217
+ GT+ ++L D+ASG + +T++ H DG + WS S + VTGG D A++F
Sbjct: 466 RQVVIGTKTGNLQLYDLASGTLLETIAAH-DGAL---WSMSLSPDQRGFVTGGADKAVKF 521
Query: 218 WD 219
WD
Sbjct: 522 WD 523
Score = 100 (40.3 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 35/128 (27%), Positives = 58/128 (45%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNT----LVNFETVRLQTSKPIQ 355
AH GA+ + ++ D ++ G+D ++ WD E + +N+ L +T LQ + +
Sbjct: 493 AHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDV- 551
Query: 356 LATTQDP-----AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGG 410
L + P AV + C VK F + + K L+ GH V C S + TG
Sbjct: 552 LCVSYSPNQKLLAVSLLDC--TVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGS 609
Query: 411 NDRQILVW 418
DR + +W
Sbjct: 610 ADRNVKIW 617
Score = 95 (38.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 22/93 (23%), Positives = 46/93 (49%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
+A+G++D V + D+ + + L GH+D + + +LVT G D +++WD+
Sbjct: 122 LASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERN-LLVTSGKDTMVKWWDLDN 180
Query: 223 AGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSS 255
CF+ + ++++ + + K L G S
Sbjct: 181 QHCFKTMVGHRTEVWGLVLVSEEKRLITGAADS 213
Score = 88 (36.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 31/146 (21%), Positives = 68/146 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174
+ G +V +V +WD ++ + K T + P + + +A G ED +R+
Sbjct: 34 EKGRYVAVPACEHVFIWDLRKGEKILILQ-GNKQEVTCLCP-SPDGLHLAVGYEDGAIRI 91
Query: 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD-IRRAGCFRVLDQSQ 233
+ SG + T +GH+ + ++++ L +G D + WD I +G +R+ +
Sbjct: 92 FSLLSGEGNITFNGHKAAVTSLKYDQLGGR-LASGSKDTDVIIWDVINESGLYRL--KGH 148
Query: 234 SQLGRRPPLLKRKSL--SAGQNSSVK 257
+ L+ ++L ++G+++ VK
Sbjct: 149 KDAVTQALFLRERNLLVTSGKDTMVK 174
Score = 76 (31.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 29/116 (25%), Positives = 48/116 (41%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V L + D + +LSA +DS I++W+ R+TL T+ + + D
Sbjct: 413 HRSDVRTLSFSSDNIAVLSAAADS-IKIWN----RSTLQCIRTMPCEYAL-CSFFVPGDR 466
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
VV ++ +D+ SG T H + S + TGG D+ + W
Sbjct: 467 QVVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFW 522
Score = 67 (28.6 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQ--LATTQ 360
H+ + L V+ G Y++SA D +RLW E R L+ E +Q + +A
Sbjct: 673 HHQEIWCLAVSPSGDYVVSASHDKSLRLW--ERTREPLILEEEREMQREAEYEESVAKED 730
Query: 361 DPAV 364
PAV
Sbjct: 731 QPAV 734
Score = 62 (26.9 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 24/94 (25%), Positives = 42/94 (44%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD-YEGGGHI-AKHRSVFVVDKQH- 98
HK ++ SL+ D R L SG+ D+ V ++DV + Y GH A +++F+ ++
Sbjct: 106 HKAAVTSLKYDQLGGR-LASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLL 164
Query: 99 -EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVW 131
G + W+ +D H +VW
Sbjct: 165 VTSGKDTMVK---WWDLDNQHCFKTMVGHRTEVW 195
Score = 61 (26.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 20/120 (16%), Positives = 49/120 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG---RNTLVNFETVRLQTSKPIQLATT 359
H V + ++ DG + + +D +++W ++ G R+ + ++V + L
Sbjct: 589 HKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSV-------MYLRFV 641
Query: 360 QDPAVVFVPCMT-AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ F +K +D + T GH++ + C S + + +D+ + +W
Sbjct: 642 PKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 60 (26.2 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
T+ GHR + T+ S SS+ I V +I+ W+ C R +
Sbjct: 409 TIGGHRSDVRTL--SFSSDNIAVLSAAADSIKIWNRSTLQCIRTM 451
Score = 56 (24.8 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 13/39 (33%), Positives = 26/39 (66%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
+K +V H+ + L V ++EE+ L++GA+DS + +D+
Sbjct: 184 FKTMVG-HRTEVWGL-VLVSEEKRLITGAADSELRAWDI 220
Score = 50 (22.7 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
AH +V L+ +AG D +I+ WD +
Sbjct: 630 AHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDAD 662
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/135 (29%), Positives = 66/135 (48%)
Query: 102 HKYAISSAIWYPVDTG-LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
H +SS + TG L TG D V VW N VM+ + G ++A
Sbjct: 19 HSSNVSSLV-LGKSTGRLLATGGDDCRVNVWSVNKPNCVMS--LTGHTTPIESLQISAKE 75
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
LI AG++ +R+ D+ + I +TL GH+ I ++++ ++ +G D I+ WD+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDV 134
Query: 221 RRAGC-FRVLDQSQS 234
RR GC F+ +Q+
Sbjct: 135 RRKGCIFKYKSHTQA 149
Score = 148 (57.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD + +K + R SP
Sbjct: 103 GHKANICSLDFHPY--GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + +GH + VE+ S E++L +G IRFW
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFW 217
Query: 219 DIRR 222
D+ +
Sbjct: 218 DLEK 221
Score = 57 (25.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H I SLQ+ EE +++G+ S+ V+D++ A
Sbjct: 62 HTTPIESLQISAKEE-LIVAGSQSGSIRVWDLEAA 95
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 160 (61.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 62/227 (27%), Positives = 102/227 (44%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-- 77
N +K STL+ K I++ H GS+ LQ D ER +++G+SDS+V V+DV
Sbjct: 323 NTIKIWDKSTLEC---KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEML 376
Query: 78 -------------DYEGGGHI--AKHRSVFVVDKQHEH---------GHKYAISSAIWYP 113
+ G + +K RS+ V D GH+ A++ +
Sbjct: 377 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 434
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D V+ S D +KVW+T+ V G ++ ++ L L+ +G+ D +R
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIR 489
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L DI GA + L GH + + + + +V+G DG I+ WD+
Sbjct: 490 LWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDL 533
Score = 137 (53.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 115 DTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G+ VT S D + VWD + T + + + G +R A++ + I + + D ++
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIK 449
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
+ + ++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GH 505
Query: 234 SQLGRRPPLLKRKSLSAGQNSSVK 257
+L R ++ +S + +K
Sbjct: 506 EELVRCIRFDNKRIVSGAYDGKIK 529
Score = 90 (36.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD + C R++ G V L +I G+ D
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHT--GSVLC-----LQYDERVIITGSSDST 364
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + ++ ++VT D +I WD+
Sbjct: 365 VRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 410
Score = 87 (35.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W+ + E VR +A Q
Sbjct: 425 HRAAVN--VVDFDDKYIVSASGDRTIKVWNTST-------CEFVRTLNGHKRGIACLQYR 475
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 531
Score = 43 (20.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+ + + T+ L+T
Sbjct: 515 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 550
Score = 40 (19.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 554 HSGRVFRLQFDE--FQIVSSSHDDTILIWD 581
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 40/132 (30%), Positives = 63/132 (47%)
Query: 102 HKYAISSAIWYPV-DTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAAS 159
H + S W D L V+GS+D VKVWD + F+ +Y T SP
Sbjct: 105 HTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPG 164
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
A+G D +R+ D+ + + + H+ I++ +W +E +LVTG D ++R WD
Sbjct: 165 CFASASG--DQTLRIWDVKTTGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWD 222
Query: 220 IR--RAGCFRVL 229
+R R F +L
Sbjct: 223 LRNVRQPVFELL 234
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 235 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 284
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 285 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 344
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 345 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 394
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 235 HLLSASDDHTVCLWDIN-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 284
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 285 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 344
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + T H+D I V WS +E IL + G D + WD+ + G
Sbjct: 345 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 394
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/174 (25%), Positives = 79/174 (45%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
YLLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 192 YLLSASDDHTICLWDIS-AVPKEG--KVVGAKTIFT-------GHTAVVEDVSWHLLHES 241
Query: 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMPGK---VYRTAMSPLAA---SHMLIAAGTEDVQ 171
LF + + D + +WDT N P Y ++ L+ S ++A+G+ D
Sbjct: 242 LFGSVADDQKLMIWDTRSN----NTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKT 297
Query: 172 VRLCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
V L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 152 (58.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 58/213 (27%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
+I++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 259 KILTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCN 315
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 316 GLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 372
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 373 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 429 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 458
Score = 135 (52.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 316 GLMVTCSKDRSIAVWDMASPTDISLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 373
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 374 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 429
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 430 LVRCIRFDNKRIVSGAYDGKIK 451
Score = 49 (22.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 437 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 472
Score = 41 (19.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 476 HSGRVFRLQFDE--FQIISSSHDDTILIWD 503
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 151 (58.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 225 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 281
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 282 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 338
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 339 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 394
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 395 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 424
Score = 140 (54.3 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 282 GLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 339
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 340 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 395
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 396 LVRCIRFDNKRIVSGAYDGKIK 417
Score = 49 (22.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 403 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 438
Score = 41 (19.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 442 HSGRVFRLQFDE--FQIISSSHDDTILIWD 469
Score = 38 (18.4 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +++ ++SG D+S+ ++D
Sbjct: 192 KG-VYCLQYD--DDK-IISGLRDNSIKIWD 217
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 151 (58.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 242 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 298
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 299 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 355
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 356 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 411
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 412 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 441
Score = 140 (54.3 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 299 GLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 356
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 357 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 412
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 413 LVRCIRFDNKRIVSGAYDGKIK 434
Score = 98 (39.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D ++G D+ +K+WD C +V+ G V L +I G+ D
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT--GSVLC-----LQYDERVIVTGSSDST 269
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
VR+ D+ +G + TL H + ++ + +S ++VT D +I WD+ A
Sbjct: 270 VRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASA 318
Score = 86 (35.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W + E VR +A Q
Sbjct: 330 HRAAVN--VVDFDDKYIVSASGDRTIKVWSTST-------CEFVRTLNGHKRGIACLQYR 380
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 381 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 436
Score = 49 (22.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 420 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 455
Score = 41 (19.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 459 HSGRVFRLQFDE--FQIISSSHDDTILIWD 486
Score = 41 (19.5 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +E+ ++SG D+S+ ++D
Sbjct: 209 KG-VYCLQYD--DEK-IISGLRDNSIKIWD 234
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 151 (58.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 242 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 298
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 299 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 355
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 356 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 411
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 412 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 441
Score = 140 (54.3 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 299 GLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 356
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 357 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 412
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 413 LVRCIRFDNKRIVSGAYDGKIK 434
Score = 98 (39.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D ++G D+ +K+WD C +V+ G V L +I G+ D
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT--GSVLC-----LQYDERVIVTGSSDST 269
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
VR+ D+ +G + TL H + ++ + +S ++VT D +I WD+ A
Sbjct: 270 VRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASA 318
Score = 86 (35.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W + E VR +A Q
Sbjct: 330 HRAAVN--VVDFDDKYIVSASGDRTIKVWSTST-------CEFVRTLNGHKRGIACLQYR 380
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 381 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 436
Score = 49 (22.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 420 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 455
Score = 41 (19.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 459 HSGRVFRLQFDE--FQIISSSHDDTILIWD 486
Score = 41 (19.5 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +E+ ++SG D+S+ ++D
Sbjct: 209 KG-VYCLQYD--DEK-IISGLRDNSIKIWD 234
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 151 (58.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 247 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 303
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 304 GLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 360
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 361 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 416
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 417 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 446
Score = 137 (53.3 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 304 GLMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 361
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 362 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 417
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 418 LVRCIRFDNKRIVSGAYDGKIK 439
Score = 96 (38.9 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 28/109 (25%), Positives = 50/109 (45%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D ++G D+ +K+WD C +V+ G V L +I G+ D
Sbjct: 222 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT--GSVLC-----LQYDERVIVTGSSDST 274
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + +S ++VT D +I WD+
Sbjct: 275 VRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDM 320
Score = 86 (35.3 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W + E VR +A Q
Sbjct: 335 HRAAVN--VVDFDDKYIVSASGDRTIKVWSTST-------CEFVRTLNGHKRGIACLQYR 385
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 386 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 441
Score = 49 (22.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 425 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 460
Score = 41 (19.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 464 HSGRVFRLQFDE--FQIISSSHDDTILIWD 491
Score = 41 (19.5 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +E+ ++SG D+S+ ++D
Sbjct: 214 KG-VYCLQYD--DEK-IISGLRDNSIKIWD 239
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 155 (59.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 48/193 (24%), Positives = 90/193 (46%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVY---------DVQRATDYEGGGHIAKHRSVF 92
H GS++S+ VD + ++ SG+ D + ++ +++ +T+ + +
Sbjct: 188 HAGSVDSIAVDGSGTKFC-SGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLT 246
Query: 93 VVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRT- 151
GH A+SS +W D + S+DH ++VWD + KV+
Sbjct: 247 RTPVVTLSGHMEAVSSVLWS--DAEEICSASWDHTIRVWDVESGSLKSTLT-GNKVFNCI 303
Query: 152 AMSPLAASHMLIAAGTEDVQVRLCD--IASGA-ISQTLSGHRDGIMTVEWSTSSEWILVT 208
+ SPL +A+G+ D +RL D G+ +S +L+ H + +V+WS + E L++
Sbjct: 304 SYSPLCKR---LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLIS 360
Query: 209 GGCDGAIRFWDIR 221
G D ++ WD R
Sbjct: 361 GSLDNIVKLWDTR 373
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 151 (58.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 259 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 315
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 316 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 372
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 373 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 429 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 458
Score = 140 (54.3 bits), Expect = 6.7e-07, Sum P(3) = 6.7e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 316 GLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 373
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 374 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 429
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 430 LVRCIRFDNKRIVSGAYDGKIK 451
Score = 49 (22.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 437 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 472
Score = 41 (19.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 476 HSGRVFRLQFDE--FQIISSSHDDTILIWD 503
Score = 38 (18.4 bits), Expect = 6.7e-07, Sum P(3) = 6.7e-07
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +++ ++SG D+S+ ++D
Sbjct: 226 KG-VYCLQYD--DDK-IISGLRDNSIKIWD 251
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 151 (58.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 259 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCN 315
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 316 GLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 372
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 373 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 429 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 458
Score = 138 (53.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 316 GLMVTCSKDRSIAVWDMASATDISLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 373
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 374 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 429
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 430 LVRCIRFDNKRIVSGAYDGKIK 451
Score = 49 (22.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 437 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 472
Score = 41 (19.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 476 HSGRVFRLQFDE--FQIISSSHDDTILIWD 503
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 46/171 (26%), Positives = 78/171 (45%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEH-GHKYAISSAIWYPVDT 116
YLLS + D ++ ++D+ AT E HR V+D ++ GH + W+ +
Sbjct: 196 YLLSASDDHTICLWDIN-ATPKE-------HR---VIDAKNIFTGHTAVVEDVAWHLLHE 244
Query: 117 GLFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 245 SLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 304
Query: 175 CDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 305 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 151 (58.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 261 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 317
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 318 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 374
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 375 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 430
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 431 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 460
Score = 140 (54.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 318 GLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 375
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 376 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 431
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 432 LVRCIRFDNKRIVSGAYDGKIK 453
Score = 98 (39.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D ++G D+ +K+WD C +V+ G V L +I G+ D
Sbjct: 236 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT--GSVLC-----LQYDERVIVTGSSDST 288
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
VR+ D+ +G + TL H + ++ + +S ++VT D +I WD+ A
Sbjct: 289 VRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASA 337
Score = 86 (35.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W + E VR +A Q
Sbjct: 349 HRAAVN--VVDFDDKYIVSASGDRTIKVWSTST-------CEFVRTLNGHKRGIACLQYR 399
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 400 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 455
Score = 49 (22.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 439 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 474
Score = 41 (19.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 478 HSGRVFRLQFDE--FQIISSSHDDTILIWD 505
Score = 41 (19.5 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +E+ ++SG D+S+ ++D
Sbjct: 228 KG-VYCLQYD--DEK-IISGLRDNSIKIWD 253
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 151 (58.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 262 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 318
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 319 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 375
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 376 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 431
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 432 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 461
Score = 140 (54.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 319 GLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 376
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 377 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 432
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 433 LVRCIRFDNKRIVSGAYDGKIK 454
Score = 98 (39.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D ++G D+ +K+WD C +V+ G V L +I G+ D
Sbjct: 237 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT--GSVLC-----LQYDERVIVTGSSDST 289
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
VR+ D+ +G + TL H + ++ + +S ++VT D +I WD+ A
Sbjct: 290 VRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASA 338
Score = 86 (35.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W + E VR +A Q
Sbjct: 350 HRAAVN--VVDFDDKYIVSASGDRTIKVWSTST-------CEFVRTLNGHKRGIACLQYR 400
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 401 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 456
Score = 49 (22.3 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 440 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 475
Score = 41 (19.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 479 HSGRVFRLQFDE--FQIISSSHDDTILIWD 506
Score = 41 (19.5 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +E+ ++SG D+S+ ++D
Sbjct: 229 KG-VYCLQYD--DEK-IISGLRDNSIKIWD 254
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 151 (58.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 274 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 330
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 387
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 388 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 444 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 473
Score = 140 (54.3 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 388
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 389 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 444
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 445 LVRCIRFDNKRIVSGAYDGKIK 466
Score = 98 (39.6 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D ++G D+ +K+WD C +V+ G V L +I G+ D
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT--GSVLC-----LQYDERVIVTGSSDST 301
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
VR+ D+ +G + TL H + ++ + +S ++VT D +I WD+ A
Sbjct: 302 VRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASA 350
Score = 86 (35.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W + E VR +A Q
Sbjct: 362 HRAAVN--VVDFDDKYIVSASGDRTIKVWSTST-------CEFVRTLNGHKRGIACLQYR 412
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 413 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 468
Score = 49 (22.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 452 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 487
Score = 41 (19.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 491 HSGRVFRLQFDE--FQIISSSHDDTILIWD 518
Score = 41 (19.5 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +E+ ++SG D+S+ ++D
Sbjct: 241 KG-VYCLQYD--DEK-IISGLRDNSIKIWD 266
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 151 (58.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 274 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 330
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 387
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 388 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 444 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 473
Score = 140 (54.3 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 388
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 389 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 444
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 445 LVRCIRFDNKRIVSGAYDGKIK 466
Score = 98 (39.6 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D ++G D+ +K+WD C +V+ G V L +I G+ D
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHT--GSVLC-----LQYDERVIVTGSSDST 301
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
VR+ D+ +G + TL H + ++ + +S ++VT D +I WD+ A
Sbjct: 302 VRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASA 350
Score = 86 (35.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 33/118 (27%), Positives = 47/118 (39%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W + E VR +A Q
Sbjct: 362 HRAAVN--VVDFDDKYIVSASGDRTIKVWSTST-------CEFVRTLNGHKRGIACLQYR 412
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 413 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 468
Score = 49 (22.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 452 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 487
Score = 41 (19.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 491 HSGRVFRLQFDE--FQIISSSHDDTILIWD 518
Score = 41 (19.5 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +E+ ++SG D+S+ ++D
Sbjct: 241 KG-VYCLQYD--DEK-IISGLRDNSIKIWD 266
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 151 (58.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-------DYEGGGHI---- 85
++++ H GS+ LQ D ER +++G+SDS+V V+DV E H+
Sbjct: 274 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN 330
Query: 86 ------AKHRSVFVVDKQHEH---------GHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130
+K RS+ V D GH+ A++ + D V+ S D +KV
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKV 387
Query: 131 WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
W T+ V G ++ ++ L L+ +G+ D +RL DI GA + L GH
Sbjct: 388 WSTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ + + + +V+G DG I+ WD++ A
Sbjct: 444 ELVRCIRFDNKR---IVSGAYDGKIKVWDLQAA 473
Score = 140 (54.3 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 117 GLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL VT S D + VWD + T + + + G +R A++ + I + + D +++
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIKVW 388
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+ +
Sbjct: 389 STSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEE 444
Query: 236 LGRRPPLLKRKSLSAGQNSSVK 257
L R ++ +S + +K
Sbjct: 445 LVRCIRFDNKRIVSGAYDGKIK 466
Score = 49 (22.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+++ + T+ L+T
Sbjct: 452 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT 487
Score = 41 (19.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 491 HSGRVFRLQFDE--FQIISSSHDDTILIWD 518
Score = 38 (18.4 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYD 72
KG + LQ D +++ ++SG D+S+ ++D
Sbjct: 241 KG-VYCLQYD--DDK-IISGLRDNSIKIWD 266
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/168 (26%), Positives = 77/168 (45%)
Query: 56 ERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV- 114
E L++ + D S+ ++D IAK + V K+H Y++ W
Sbjct: 78 EHVLITSSGDGSLQIWD------------IAKPKGPLQVYKEHTQ-EAYSVD---WSQTR 121
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
L V+GS+D K+WD + + FK G +Y T SP A+G D +R
Sbjct: 122 GEQLVVSGSWDQTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASG--DQTLR 179
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
+ D+ + + + H+ I++ +W E +LVTG D +++ WD+R
Sbjct: 180 IWDVKAPGVRLVIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLR 227
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 157 (60.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-- 77
N +K +TL+ K I++ H GS+ LQ D ER +++G+SDS+V V+DV
Sbjct: 282 NTIKIWDKNTLEC---KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEML 335
Query: 78 -------------DYEGGGHI--AKHRSVFVVDKQHEH---------GHKYAISSAIWYP 113
+ G + +K RS+ V D GH+ A++ +
Sbjct: 336 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 393
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D V+ S D +KVW+T+ V G ++ ++ L L+ +G+ D +R
Sbjct: 394 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIR 448
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L DI GA + L GH + + + + +V+G DG I+ WD+
Sbjct: 449 LWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDL 492
Score = 137 (53.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 115 DTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G+ VT S D + VWD + T + + + G +R A++ + I + + D ++
Sbjct: 351 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIK 408
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
+ + ++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+
Sbjct: 409 VWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GH 464
Query: 234 SQLGRRPPLLKRKSLSAGQNSSVK 257
+L R ++ +S + +K
Sbjct: 465 EELVRCIRFDNKRIVSGAYDGKIK 488
Score = 95 (38.5 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD N C R++ G V L +I G+ D
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHT--GSVLC-----LQYDERVIITGSSDST 323
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + ++ ++VT D +I WD+
Sbjct: 324 VRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 369
Score = 87 (35.7 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W+ + E VR +A Q
Sbjct: 384 HRAAVN--VVDFDDKYIVSASGDRTIKVWNTST-------CEFVRTLNGHKRGIACLQYR 434
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 435 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 490
Score = 43 (20.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+ + + T+ L+T
Sbjct: 474 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 509
Score = 40 (19.1 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 513 HSGRVFRLQFDE--FQIVSSSHDDTILIWD 540
>MGI|MGI:1914587 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA,
subunit 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1914587 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144
KO:K14406 OMA:LYDHTDE OrthoDB:EOG4868CD EMBL:AK011943 EMBL:AK050686
EMBL:AK078667 EMBL:AK145001 EMBL:BC003440 IPI:IPI00116747
RefSeq:NP_077161.1 UniGene:Mm.26944 ProteinModelPortal:Q99LC2
SMR:Q99LC2 STRING:Q99LC2 PhosphoSite:Q99LC2 PaxDb:Q99LC2
PRIDE:Q99LC2 DNASU:67337 Ensembl:ENSMUST00000116375 GeneID:67337
KEGG:mmu:67337 GeneTree:ENSGT00700000104487 InParanoid:Q99LC2
NextBio:324286 Bgee:Q99LC2 Genevestigator:Q99LC2
GermOnline:ENSMUSG00000027498 Uniprot:Q99LC2
Length = 431
Score = 107 (42.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 50/240 (20%), Positives = 99/240 (41%)
Query: 31 QLSNYKEI-VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGG-HIAKH 88
+ S Y+ V+ HKG + + + +G++D+S+ + D +R + +
Sbjct: 95 EASEYETCYVTSHKGPCRVATYS-RDGQLIATGSADASIKILDTERMLAKSAMPIEVMMN 153
Query: 89 RSVFVVDKQHE-----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK 143
+ + H + H ++ ++P + + +GS D+ +K++D + FK
Sbjct: 154 ETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQ-ILASGSRDYTLKLFDYSKPSAKRAFK 212
Query: 144 MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA--IS-QTLSGHRDGIMTVEWST 200
+ S I GT+ +RL DI + +S H D I +V ++
Sbjct: 213 YIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNP 272
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKS---LSAGQNSSVK 257
S+ + VTG DG I+ WD C +++ + + S LS+G++S K
Sbjct: 273 SAN-MYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAK 331
Score = 93 (37.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 32/124 (25%), Positives = 51/124 (41%)
Query: 302 AHYGA-VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKP--IQLAT 358
AH GA V +++ Y+LS+G DS +LW++ +GR TLV + L + Q
Sbjct: 303 AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGR-TLVRYTGAGLSGRQVHRTQAVF 361
Query: 359 TQDPAVVFVPCMTAVKAFDIWSGKTC----LTFRGHYEYVNCCCFSSQDQELYTGGNDRQ 414
+ +P + + W +T L GH V C S + T +D +
Sbjct: 362 NHTEDYILLPDERTI-SLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR 420
Query: 415 ILVW 418
W
Sbjct: 421 ARFW 424
>RGD|1309267 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA, subunit
1, 50kDa" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309267 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397
CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144 KO:K14406
OMA:LYDHTDE OrthoDB:EOG4868CD GeneTree:ENSGT00700000104487
EMBL:BC091381 IPI:IPI00365055 RefSeq:NP_001013179.1 UniGene:Rn.8860
ProteinModelPortal:Q5BJQ6 SMR:Q5BJQ6 STRING:Q5BJQ6 PRIDE:Q5BJQ6
Ensembl:ENSRNOT00000055101 GeneID:311670 KEGG:rno:311670
InParanoid:Q5BJQ6 NextBio:664016 Genevestigator:Q5BJQ6
GermOnline:ENSRNOG00000004775 Uniprot:Q5BJQ6
Length = 431
Score = 107 (42.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 50/240 (20%), Positives = 99/240 (41%)
Query: 31 QLSNYKEI-VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGG-HIAKH 88
+ S Y+ V+ HKG + + + +G++D+S+ + D +R + +
Sbjct: 95 EASEYETCYVTSHKGPCRVATYS-RDGQLIATGSADASIKILDTERMLAKSAMPIEVMMN 153
Query: 89 RSVFVVDKQHE-----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK 143
+ + H + H ++ ++P + + +GS D+ +K++D + FK
Sbjct: 154 ETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQ-ILASGSRDYTLKLFDYSKPSAKRAFK 212
Query: 144 MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA--IS-QTLSGHRDGIMTVEWST 200
+ S I GT+ +RL DI + +S H D I +V ++
Sbjct: 213 YIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNP 272
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKS---LSAGQNSSVK 257
S+ + VTG DG I+ WD C +++ + + S LS+G++S K
Sbjct: 273 SAN-MYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAK 331
Score = 93 (37.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 32/124 (25%), Positives = 51/124 (41%)
Query: 302 AHYGA-VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKP--IQLAT 358
AH GA V +++ Y+LS+G DS +LW++ +GR TLV + L + Q
Sbjct: 303 AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGR-TLVRYTGAGLSGRQVHRTQAVF 361
Query: 359 TQDPAVVFVPCMTAVKAFDIWSGKTC----LTFRGHYEYVNCCCFSSQDQELYTGGNDRQ 414
+ +P + + W +T L GH V C S + T +D +
Sbjct: 362 NHTEDYILLPDERTI-SLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR 420
Query: 415 ILVW 418
W
Sbjct: 421 ARFW 424
>UNIPROTKB|A8XL02 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 EMBL:HE600904 HAMAP:MF_03029
ProteinModelPortal:A8XL02 STRING:A8XL02 EnsemblMetazoa:CBG14922
WormBase:CBG14922 HOGENOM:HOG000154844 Uniprot:A8XL02
Length = 446
Score = 149 (57.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 52/199 (26%), Positives = 97/199 (48%)
Query: 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQ---RATDYEGGGHIAKHRSVF 92
K + H+ ++ + V+ R +SG+ D+++ V+++ AT YE + +
Sbjct: 211 KIVFRGHERAVECVSVNSDATR-AISGSVDTNLKVWNLDPSDEATIYEKEEEESSAKKKR 269
Query: 93 VVDKQHE------HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG 146
D + + GH+ +SS +W P +G + S+DH V WD V K P
Sbjct: 270 KKDTRTKVPMVTIGGHRDKVSSVVWCPWKSGHAFSCSWDHTVVQWDLELAGEVSRIKGP- 328
Query: 147 KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS--GA-ISQTLSGHRDG-IMTVEWSTSS 202
K + T++ S++LI++ T+ + RL D + GA + Q+ GH++G + +V+W+
Sbjct: 329 KSF-TSIDIHPTSNLLISSCTDAIP-RLYDPKNRDGAMVKQSFIGHQNGWVESVKWNPVD 386
Query: 203 EWILVTGGCDGAIRFWDIR 221
E V+ D + WD+R
Sbjct: 387 ENQFVSVSTDKTAKMWDVR 405
Score = 48 (22.0 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTL 340
D +S +D ++WDV S +++L
Sbjct: 386 DENQFVSVSTDKTAKMWDVRSSKSSL 411
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 154 (59.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 50/192 (26%), Positives = 83/192 (43%)
Query: 55 EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV 114
+E +LS + D +V +D+ G K R +F GH+ + W+ +
Sbjct: 184 KEGLILSASDDQTVCHWDINGNAGANGE---LKAREIF-------KGHESVVEDVAWHVL 233
Query: 115 DTGLFVTGSYDHYVKVWD--TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQV 172
G+F + D + +WD TN ++ +V A +P S ++A G+ D V
Sbjct: 234 HDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHS-AEVNCLAFNPY--SEFILATGSADKTV 290
Query: 173 RLCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQ 231
L D+ + + + HRD I V+WS +E IL + G D + WD+ + G DQ
Sbjct: 291 ALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG----EDQ 346
Query: 232 SQSQLGRRPPLL 243
+ PP L
Sbjct: 347 TAEDAEDGPPEL 358
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 154 (59.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHE-- 99
H GS++S+ VD + ++ SG+ D + ++ TD E + +R K +
Sbjct: 188 HAGSVDSIAVDGSGTKFC-SGSWDKMLKIWSTV-PTDEEDEMEESTNRPR-KKQKTEQLG 244
Query: 100 ---------HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYR 150
GH A+SS +W D + S+DH ++VWD + KV+
Sbjct: 245 LTRTPIVTLSGHMEAVSSVLWS--DAEEICSASWDHTIRVWDVESGSLKSTLT-GNKVFN 301
Query: 151 T-AMSPLAASHMLIAAGTEDVQVRLCD--IASGA-ISQTLSGHRDGIMTVEWSTSSEWIL 206
+ SPL +A+G+ D +RL D G+ +S +L+ H + +V+WS + E L
Sbjct: 302 CISYSPLCKR---LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQL 358
Query: 207 VTGGCDGAIRFWDIR 221
++G D ++ WD R
Sbjct: 359 ISGSLDNIVKLWDTR 373
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 152 (58.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 41 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 95
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 154
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 155 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 200
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 201 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 260
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 261 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 312
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 313 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 126 (49.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 30/111 (27%), Positives = 49/111 (44%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174
DT L G D +KVWD V++NF G + + + +G++D + +
Sbjct: 90 DTDLLAVGYADGVIKVWDLMSKTVLLNFN--GHKAAITLLQFDGTGTRLISGSKDSNIIV 147
Query: 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGC 225
D+ L H+D I T W +W++ T DG I+ WD++ C
Sbjct: 148 WDLVGEVGLYKLRSHKDSI-TGFWCQGEDWLISTSK-DGMIKLWDLKTHQC 196
Score = 104 (41.7 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 30/110 (27%), Positives = 51/110 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174
D L T S + +K+W+ + + F+ G P +L+ GT + +++L
Sbjct: 402 DNKLLATAS-NGSLKIWNIKTHKCIRTFEC-GYALTCKFLP---GGLLVILGTRNGELQL 456
Query: 175 CDIASGAISQTLSGHRDGIMTVEWS---TSSEWILVTGGCDGAIRFWDIR 221
D+AS ++ T+ D + WS TS LVTG D ++FWD +
Sbjct: 457 FDLASSSLLDTIEDAHDAAI---WSLDLTSDGKRLVTGSADKTVKFWDFK 503
Score = 81 (33.6 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 32/131 (24%), Positives = 55/131 (41%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLV----N--FETVRLQTSKPIQ 355
AH A+ L +T DG L++ +D ++ WD + N+LV N ++L ++
Sbjct: 471 AHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKV-ENSLVPGTKNKFLPVLKLHHDTTLE 529
Query: 356 LA-------TTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELY 407
L + D + + + VK F + S K L+ GH V S + +
Sbjct: 530 LTDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMII 589
Query: 408 TGGNDRQILVW 418
T D+ I +W
Sbjct: 590 TSSADKNIKIW 600
Score = 72 (30.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLW--DVES----GRNTLVN-FETVRLQTSKPI 354
AH G GL V +D L++ G+DS++++W D+E+ G+ T + FE Q I
Sbjct: 202 AHTGECWGLAVKDD--LLITTGTDSQVKIWKLDIENDKMGGKLTEMGIFEKQSKQRGLKI 259
Query: 355 QLATTQDPAVVFVPCMTAVKAFD 377
+ T F A K +
Sbjct: 260 EFITNSSDKTSFFYIQNADKTIE 282
Score = 67 (28.6 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
HK +I LQ D T R L+SG+ DS++ V+D+
Sbjct: 120 HKAAITLLQFDGTGTR-LISGSKDSNIIVWDL 150
Score = 64 (27.6 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
AH V L V DG +++S+ D IR+W+
Sbjct: 655 AHQSEVWALAVATDGGFVVSSSHDHSIRIWE 685
Score = 57 (25.1 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 11/45 (24%), Positives = 25/45 (55%)
Query: 186 LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230
L G R + +++ S ++ +L T +G+++ W+I+ C R +
Sbjct: 387 LQGQRTDVRSIDISDDNK-LLATAS-NGSLKIWNIKTHKCIRTFE 429
Score = 50 (22.7 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 22/113 (19%), Positives = 47/113 (41%)
Query: 307 VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVF 366
V + +++D LL+ S+ +++W++++ + + FE T K + V+
Sbjct: 394 VRSIDISDDNK-LLATASNGSLKIWNIKTHK-CIRTFECGYALTCKFLPGGLL----VIL 447
Query: 367 VPCMTAVKAFDIWSGKTCLTFR-GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
++ FD+ S T H + +S + L TG D+ + W
Sbjct: 448 GTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFW 500
Score = 48 (22.0 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
H V + ++ D ++++ +D I++W ++ G
Sbjct: 572 HKLPVLSIDISFDSKMIITSSADKNIKIWGLDFG 605
Score = 44 (20.5 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV 148
V L +T D VK+W + + N KM GK+
Sbjct: 212 VKDDLLITTGTDSQVKIWKLD----IENDKMGGKL 242
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
AH ++ +K S D+ ++ WD E
Sbjct: 613 AHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDGE 645
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 157 (60.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-- 77
N +K +TL+ K I++ H GS+ LQ D ER +++G+SDS+V V+DV
Sbjct: 323 NTIKIWDKNTLEC---KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNAGEML 376
Query: 78 -------------DYEGGGHI--AKHRSVFVVDKQHEH---------GHKYAISSAIWYP 113
+ G + +K RS+ V D GH+ A++ +
Sbjct: 377 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 434
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D V+ S D +KVW+T+ V G ++ ++ L L+ +G+ D +R
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIR 489
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L DI GA + L GH + + + + +V+G DG I+ WD+
Sbjct: 490 LWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDL 533
Score = 137 (53.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 115 DTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G+ VT S D + VWD + T + + + G +R A++ + I + + D ++
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIK 449
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
+ + ++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GH 505
Query: 234 SQLGRRPPLLKRKSLSAGQNSSVK 257
+L R ++ +S + +K
Sbjct: 506 EELVRCIRFDNKRIVSGAYDGKIK 529
Score = 95 (38.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD N C R++ G V L +I G+ D
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHT--GSVLC-----LQYDERVIITGSSDST 364
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + ++ ++VT D +I WD+
Sbjct: 365 VRVWDVNAGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 410
Score = 87 (35.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W+ + E VR +A Q
Sbjct: 425 HRAAVN--VVDFDDKYIVSASGDRTIKVWNTST-------CEFVRTLNGHKRGIACLQYR 475
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 531
Score = 43 (20.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+ + + T+ L+T
Sbjct: 515 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 550
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 554 HSGRVFRLQFDE--FQIVSSSHDDTILIWD 581
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 157 (60.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-- 77
N +K +TL+ K I++ H GS+ LQ D ER +++G+SDS+V V+DV
Sbjct: 323 NTIKIWDKNTLEC---KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEML 376
Query: 78 -------------DYEGGGHI--AKHRSVFVVDKQHEH---------GHKYAISSAIWYP 113
+ G + +K RS+ V D GH+ A++ +
Sbjct: 377 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 434
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D V+ S D +KVW+T+ V G ++ ++ L L+ +G+ D +R
Sbjct: 435 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN--G--HKRGIACLQYRDRLVVSGSSDNTIR 489
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L DI GA + L GH + + + + +V+G DG I+ WD+
Sbjct: 490 LWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDL 533
Score = 137 (53.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 36/144 (25%), Positives = 72/144 (50%)
Query: 115 DTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G+ VT S D + VWD + T + + + G +R A++ + I + + D ++
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG--HRAAVNVVDFDDKYIVSASGDRTIK 449
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQ 233
+ + ++ +TL+GH+ GI +++ + ++V+G D IR WDI C RVL+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE-GH 505
Query: 234 SQLGRRPPLLKRKSLSAGQNSSVK 257
+L R ++ +S + +K
Sbjct: 506 EELVRCIRFDNKRIVSGAYDGKIK 529
Score = 95 (38.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD N C R++ G V L +I G+ D
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHT--GSVLC-----LQYDERVIITGSSDST 364
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
VR+ D+ +G + TL H + ++ + ++ ++VT D +I WD+
Sbjct: 365 VRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 410
Score = 87 (35.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-- 360
H AV V D Y++SA D I++W+ + E VR +A Q
Sbjct: 425 HRAAVN--VVDFDDKYIVSASGDRTIKVWNTST-------CEFVRTLNGHKRGIACLQYR 475
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D VV ++ +DI G GH E V C F ++ + +G D +I VW
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVW 531
Score = 43 (20.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 350
D ++S D +I++WD+ + + T+ L+T
Sbjct: 515 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 550
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H G V L+ E ++S+ D I +WD
Sbjct: 554 HSGRVFRLQFDE--FQIVSSSHDDTILIWD 581
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 119 (46.9 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 121 TGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS 179
TGS+D K+W + F+ ++ A +P + L+A G+ D +L D+ S
Sbjct: 152 TGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST---LVATGSMDTTAKLWDVES 208
Query: 180 GAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQL 236
G TL+GH I+++ ++T+ + LVTG D WD+ VL + ++
Sbjct: 209 GEEVSTLAGHFAEIISLCFNTTGDR-LVTGSFDHTAILWDVPSGRKVHVLSGHRGEI 264
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 37/126 (29%), Positives = 56/126 (44%)
Query: 320 LSAGS-DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFD 377
++ GS D +LW E+G+ F T R T++ + LA +V M T K +D
Sbjct: 150 VATGSFDKTCKLWSAETGKC----FYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 378 IWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW-CPSR---HISDGVDAGPM 433
+ SG+ T GH+ + CF++ L TG D ++W PS H+ G
Sbjct: 206 VESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEIS 265
Query: 434 QDQDNW 439
Q NW
Sbjct: 266 CVQFNW 271
Score = 105 (42.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 29/104 (27%), Positives = 46/104 (44%)
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMS-PLAASHMLIAAGTEDVQVRLCD 176
F+TGSYD K+WDT + + VY A + P +A G+ D +L
Sbjct: 107 FITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDK---VATGSFDKTCKLWS 163
Query: 177 IASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+G T GH I+ + ++ S ++ TG D + WD+
Sbjct: 164 AETGKCFYTFRGHTAEIVCLAFNPQST-LVATGSMDTTAKLWDV 206
Score = 103 (41.3 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 34/129 (26%), Positives = 48/129 (37%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH I + P T L TGS D K+WD V + G +
Sbjct: 175 GHTAEIVCLAFNPQST-LVATGSMDTTAKLWDVESGEEVST--LAGHFAEIISLCFNTTG 231
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+ G+ D L D+ SG LSGHR I V+++ ++ T D + + WD
Sbjct: 232 DRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCS-LIATASLDKSCKVWDA 290
Query: 221 RRAGCFRVL 229
C L
Sbjct: 291 EGGQCLATL 299
Score = 97 (39.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 34/138 (24%), Positives = 56/138 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH I S + L VTGS+DH +WD R V + G +
Sbjct: 217 GHFAEIISLCFNTTGDRL-VTGSFDHTAILWDVPSGRKV--HVLSGHRGEISCVQFNWDC 273
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
LIA + D ++ D G TL GH D ++ V ++ + + ++ T DG R +
Sbjct: 274 SLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ-LIATASADGTSRVFST 332
Query: 221 RRAGCFRVLDQSQSQLGR 238
C L+ + ++ +
Sbjct: 333 DTFQCLCQLEGHKGEISK 350
Score = 86 (35.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 31/103 (30%), Positives = 47/103 (45%)
Query: 319 LLSAGS-DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLA--TTQDPAVVFVPCMTAVKA 375
L++ GS D+ +LWDVESG T+ ++ I L TT D V TA+
Sbjct: 191 LVATGSMDTTAKLWDVESGEEV----STLAGHFAEIISLCFNTTGDRLVTGSFDHTAI-L 245
Query: 376 FDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+D+ SG+ GH ++C F+ + T D+ VW
Sbjct: 246 WDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVW 288
Score = 79 (32.9 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLV--NFETVRLQTSKPIQL 356
+ H G ++ ++ D + +A D ++WD E G+ TL+ N E + + + QL
Sbjct: 258 SGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQL 317
Query: 357 ATTQDPAVVFVPCMTAVKAFDIWSGKTCLT-FRGHYEYVNCCCFSSQDQELYTGGNDRQI 415
T + V + D + CL GH ++ CF++Q + T D+
Sbjct: 318 IATAS-----ADGTSRVFSTDTFQ---CLCQLEGHKGEISKVCFNAQGSRVLTASVDKTS 369
Query: 416 LVWC 419
VWC
Sbjct: 370 RVWC 373
Score = 73 (30.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 29/111 (26%), Positives = 45/111 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H+ + L G L++ D LWDV SGR V R + S +Q D
Sbjct: 218 HFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHV-LSGHRGEISC-VQF--NWDC 273
Query: 363 AVVFVPCMT-AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND 412
+++ + + K +D G+ T GH + V CF+ Q + T D
Sbjct: 274 SLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASAD 324
Score = 67 (28.6 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 374 KAFDIWSGKT--CL-TFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
K +W KT CL GH + + C F+ + + TG D +W
Sbjct: 367 KTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 49 (22.3 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
H G ++ + G +L+A D R+W V++G
Sbjct: 344 HKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTG 377
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 32/123 (26%), Positives = 56/123 (45%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLA 157
GH + W+P + TGS D V++WD C R+ + + V AMSP
Sbjct: 500 GHLSDVDCVQWHP-NCNYIATGSSDKTVRLWDVQTGECVRIFIGHR--SMVLSLAMSP-- 554
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+A+G ED + + D+++ L GH + ++ +S +L +G D ++
Sbjct: 555 -DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGS-LLASGSADCTVKL 612
Query: 218 WDI 220
WD+
Sbjct: 613 WDV 615
Score = 128 (50.1 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 52/218 (23%), Positives = 95/218 (43%)
Query: 20 NRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDY 79
NRV+ ++ +S Y V+ H G +N + + + G SDSS+ V+D+ +
Sbjct: 331 NRVQLSSVAMPSVSFYT-FVNTHNG-LNCSSIS-HDGSLVAGGFSDSSIKVWDMAKIGQA 387
Query: 80 EGGGHIAKHRSV---FVVDKQHEH----GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVW 131
G A++ S + + + GH + SA + P G FV + S D +++W
Sbjct: 388 GSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSP--PGDFVLSSSADTTIRLW 445
Query: 132 DTNCTRVVMNFKMPG-KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190
T ++ +K V+ SP H A+ + D R+ + + ++GH
Sbjct: 446 STKLNANLVCYKGHNYPVWDAQFSPFG--HYF-ASCSHDRTARIWSMDRIQPLRIMAGHL 502
Query: 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRV 228
+ V+W + +I TG D +R WD++ C R+
Sbjct: 503 SDVDCVQWHPNCNYI-ATGSSDKTVRLWDVQTGECVRI 539
Score = 120 (47.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH Y + A + P F + S+D ++W + R+ M G + +
Sbjct: 458 GHNYPVWDAQFSPFGH-YFASCSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVQWHPNC 514
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
IA G+ D VRL D+ +G + GHR ++++ S + + +G DG I WD+
Sbjct: 515 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRY-MASGDEDGTIMMWDL 573
Query: 221 RRAGCFRVL 229
A C L
Sbjct: 574 STARCITPL 582
Score = 75 (31.5 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 26/105 (24%), Positives = 44/105 (41%)
Query: 318 YLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTS-KPIQLATTQDPAVVFVPCMTAVKAF 376
Y+ + SD +RLWDV++G E VR+ + + L+ P ++
Sbjct: 516 YIATGSSDKTVRLWDVQTG-------ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTI 568
Query: 377 DIWSGKT--CLT-FRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+W T C+T GH V +S + L +G D + +W
Sbjct: 569 MMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 68 (29.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR 337
H V L ++ DG Y+ S D I +WD+ + R
Sbjct: 543 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTAR 577
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVES 335
H V L + +G L S +D ++LWDV S
Sbjct: 585 HNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 157 (60.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAA 158
GH + ++P G ++ TGS DH V++W +++ F V + A SP
Sbjct: 579 GHTQDVECVAFHP--NGNYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSP--D 634
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
ML AAG E+ +VR+ D+A+GA L H I ++ WST + L T DG +R W
Sbjct: 635 GKMLAAAG-EETKVRIFDLAAGAQLAELKDHSASISSLSWSTHNRH-LATACSDGTLRLW 692
Query: 219 DIRR 222
DI++
Sbjct: 693 DIKK 696
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 108 (43.1 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 31/112 (27%), Positives = 47/112 (41%)
Query: 121 TGSYDHYVKVWDTNCTRVVMNFK--MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA 178
+G +D VK+W N + + MP +V + A P S +A D RL D+
Sbjct: 327 SGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHP---SGRFLATACYDSSWRLWDLE 383
Query: 179 SGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230
GH + + + + +LVTGG D R WD+R C L+
Sbjct: 384 QKTEVLHQEGHAKPVHCLSYHSDGS-VLVTGGLDAFGRVWDLRTGRCIMFLE 434
Score = 94 (38.1 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 30/121 (24%), Positives = 50/121 (41%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H GAV G+ + +G ++ + D+ ++WD+ R + T+ T+ + Q+
Sbjct: 436 HLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRR-RQPVY---TIPAHTNLISDVKYQQEC 491
Query: 363 AVVFVPCMTAVKAFDIWSGKT---CLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWC 419
V C + IWS KT T +GH V + Q + T DR +W
Sbjct: 492 GSFLVTC-SYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWS 550
Query: 420 P 420
P
Sbjct: 551 P 551
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 157 (60.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH ++ ++P ++ TGS D V++WD NC R+ K G ++ SP
Sbjct: 626 GHLADVNCTRYHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHK--GPIHSLTFSP-- 680
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ +A G D +V L DI G + L GH D + ++ +S E IL +G D +R
Sbjct: 681 -NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRL 738
Query: 218 WDIRRA 223
WD +A
Sbjct: 739 WDAVKA 744
Score = 103 (41.3 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 42/194 (21%), Positives = 81/194 (41%)
Query: 51 VDLTEERYLLSGA-SDSSVAVYDVQ----RATDYEGGGHIAKHRSVFVVDKQHE------ 99
VD+T++ L++G +DS+V V+ V R+ + S V+++ +
Sbjct: 477 VDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASE 536
Query: 100 ----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMS 154
+GH + A + P D ++ S D V++W ++ +K V+ T S
Sbjct: 537 LKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 595
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P + ++ G + V RL + +GH + + +S ++ TG D
Sbjct: 596 PYG--YYFVSGGHDRV-ARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYV-ATGSADRT 651
Query: 215 IRFWDIRRAGCFRV 228
+R WD+ C R+
Sbjct: 652 VRLWDVLNGNCVRI 665
Score = 72 (30.4 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
T H G + L + +G +L + +D R+ LWD+ G
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 702
Score = 64 (27.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H V L+ + DG L S D+ +RLWD
Sbjct: 711 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 150 (57.9 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 40/132 (30%), Positives = 63/132 (47%)
Query: 102 HKYAISSAIWYPV-DTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAAS 159
H + S W L V+GS+D VK+WD R + FK +Y T SP
Sbjct: 110 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGRSLCTFKGHESIIYSTIWSPHIPG 169
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
A+G D +R+ D+ + + + H+ I++ +W +E +LVTG D ++R WD
Sbjct: 170 CFASASG--DQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWD 227
Query: 220 IR--RAGCFRVL 229
+R R F +L
Sbjct: 228 LRNVRQPVFELL 239
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 131 (51.2 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 125 DHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA 181
D V++W N R+ + G V + SP L +AG ED +++L D+ASG
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHR--GPVLSLSFSP--NGKYLASAG-EDQRLKLWDLASGT 55
Query: 182 ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQL 236
+ + L GH D I ++ +S S ++ + D ++R WDIR C D S +L
Sbjct: 56 LFKELRGHTDSITSLAFSPDSG-LIASASMDNSVRVWDIRSTCCNTPADGSSGEL 109
Score = 121 (47.7 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 33/85 (38%), Positives = 46/85 (54%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ 360
T H G V L + +G YL SAG D R++LWD+ SG TL F+ +R T LA +
Sbjct: 19 TGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASG--TL--FKELRGHTDSITSLAFSP 74
Query: 361 DPAVVFVPCM-TAVKAFDIWSGKTC 384
D ++ M +V+ +DI S TC
Sbjct: 75 DSGLIASASMDNSVRVWDIRS--TC 97
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 50/179 (27%), Positives = 84/179 (46%)
Query: 56 ERYLLSGASDSSVAVYDVQRATDYEGGGHIAK-H-RSVFVVDKQHEHGHKYAISSAIWYP 113
E L++ + D S+ ++D +AT G + K H + V+ VD G +
Sbjct: 80 EHILVTCSGDGSLQLWDTAKAT---GPLQVYKEHTQEVYSVDWSQTRGEQ---------- 126
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQV 172
L V+GS+D VK+WD + + F+ +Y T SP A+G D +
Sbjct: 127 ----LVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASASG--DQTL 180
Query: 173 RLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR--RAGCFRVL 229
R+ D+ S + + H+ I++ +W +E +LVTG D ++R WD+R R F +L
Sbjct: 181 RIWDVKSTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELL 239
Score = 87 (35.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 28/94 (29%), Positives = 42/94 (44%)
Query: 139 VMNFKMPGKV-YRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR------- 190
V ++PG+ Y SP + AA + + C + Q SG R
Sbjct: 9 VRTLRVPGRHGYAAEFSPYLPGRLACAAA-QHYGIAGCGTLL-ILDQNESGLRLFRSFDW 66
Query: 191 -DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
DG+ V WS ++E ILVT DG+++ WD +A
Sbjct: 67 NDGLFDVTWSENNEHILVTCSGDGSLQLWDTAKA 100
Score = 72 (30.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 23/102 (22%), Positives = 42/102 (41%)
Query: 319 LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-DPAVVFVPCMTAVKAFD 377
L++ D ++LWD L ++ Q + + T+ + VV VK +D
Sbjct: 83 LVTCSGDGSLQLWDTAKATGPLQVYKE-HTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD 141
Query: 378 IWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGN-DRQILVW 418
GK+ TFRGH + +S + + D+ + +W
Sbjct: 142 PTVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIW 183
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVEDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSAARDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 70/330 (21%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WDV
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDYKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 150 (57.9 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 67/295 (22%), Positives = 122/295 (41%)
Query: 146 GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS-QTLSGHRDGIMTVEWSTSSEW 204
G++Y + S + L +AG D Q+ L ++ + L GH+ IM V+++ S
Sbjct: 37 GEIYTSQFS--SDGSFLASAGY-DQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSH 93
Query: 205 ILVTGGCDGAIRFWDIRRAGCFRVLDQ-----SQSQLGRRPPLLKRKSLSAGQNSSVKPR 259
LV+ G D +R WD+ C R + + RR P + SA + +V
Sbjct: 94 -LVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQM---ICSASDDGTVMVH 149
Query: 260 APQKRSANGNGV---RQSSVGRIPAK-----GSVRQRLHP-GMLSSQDR--ATAHYGAVT 308
+ + A + +Q++V A G + ++ ML + R + H +T
Sbjct: 150 DMRSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTIT 209
Query: 309 GLKVTEDGMYLLSAGSDSRIRLWDVES---GRNTLVNFETVRLQTSKPIQLATTQDPAVV 365
L V+ +G +LLS D + WD+ + + ++ K + L P
Sbjct: 210 SLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNL-LKCGWSPRDN 268
Query: 366 FVPCMTAVKAFDIWSGKT--CL-TFRGHYEYVNCCCFSSQDQELYTGGNDRQILV 417
++ +A + +W+ K+ C+ GH VNC Q L + G+D+ I +
Sbjct: 269 YITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDKTIFL 323
Score = 111 (44.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFET-------VRLQTSKPIQ 355
H GA+ +K D +L+SAG+D +R+WD+E+G + + NF++ V + P
Sbjct: 78 HKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETG-SCIRNFKSHTDIVNSVDVNRRGPQM 136
Query: 356 LATTQDPAVVFVPCMT---AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND 412
+ + D V V M A K F +T +TF + V C GG D
Sbjct: 137 ICSASDDGTVMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVIC------------GGID 184
Query: 413 RQILVW 418
QI VW
Sbjct: 185 NQIKVW 190
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
A + L GH I T ++S+ + L + G D I W++
Sbjct: 27 APTMVLQGHGGEIYTSQFSSDGSF-LASAGYDQQIFLWNV 65
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 156 (60.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH ++ ++P ++ TGS D V++WD NC R+ K G ++ SP
Sbjct: 623 GHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHK--GPIHSLTFSP-- 677
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ +A G D +V L DI G + L GH D + ++ +S E IL +G D +R
Sbjct: 678 -NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRL 735
Query: 218 WDIRRA 223
WD +A
Sbjct: 736 WDAIKA 741
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/194 (21%), Positives = 81/194 (41%)
Query: 51 VDLTEERYLLSGA-SDSSVAVYDVQ----RATDYEGGGHIAKHRSVFVVDKQHE------ 99
VD+T++ L++G +DS+V V+ V R+ + S V+++ +
Sbjct: 474 VDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASE 533
Query: 100 ----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMS 154
+GH + A + P D ++ S D V++W ++ +K V+ T S
Sbjct: 534 LKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 592
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P + ++ G + V RL + +GH + + +S ++ TG D
Sbjct: 593 PYG--YYFVSGGHDRV-ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV-ATGSADRT 648
Query: 215 IRFWDIRRAGCFRV 228
+R WD+ C R+
Sbjct: 649 VRLWDVLNGNCVRI 662
Score = 72 (30.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
T H G + L + +G +L + +D R+ LWD+ G
Sbjct: 664 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 699
Score = 64 (27.6 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H V L+ + DG L S D+ +RLWD
Sbjct: 708 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 156 (60.0 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH ++ ++P ++ TGS D V++WD NC R+ K G ++ SP
Sbjct: 625 GHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHK--GPIHSLTFSP-- 679
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ +A G D +V L DI G + L GH D + ++ +S E IL +G D +R
Sbjct: 680 -NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRL 737
Query: 218 WDIRRA 223
WD +A
Sbjct: 738 WDAVKA 743
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/194 (21%), Positives = 81/194 (41%)
Query: 51 VDLTEERYLLSGA-SDSSVAVYDVQ----RATDYEGGGHIAKHRSVFVVDKQHE------ 99
VD+T++ L++G +DS+V V+ V R+ + S V+++ +
Sbjct: 476 VDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASE 535
Query: 100 ----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMS 154
+GH + A + P D ++ S D V++W ++ +K V+ T S
Sbjct: 536 LKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P + ++ G + V RL + +GH + + +S ++ TG D
Sbjct: 595 PYG--YYFVSGGHDRV-ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV-ATGSADRT 650
Query: 215 IRFWDIRRAGCFRV 228
+R WD+ C R+
Sbjct: 651 VRLWDVLNGNCVRI 664
Score = 72 (30.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
T H G + L + +G +L + +D R+ LWD+ G
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 701
Score = 64 (27.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H V L+ + DG L S D+ +RLWD
Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 156 (60.0 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH ++ ++P ++ TGS D V++WD NC R+ K G ++ SP
Sbjct: 625 GHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHK--GPIHSLTFSP-- 679
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ +A G D +V L DI G + L GH D + ++ +S E IL +G D +R
Sbjct: 680 -NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRL 737
Query: 218 WDIRRA 223
WD +A
Sbjct: 738 WDAIKA 743
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/194 (21%), Positives = 81/194 (41%)
Query: 51 VDLTEERYLLSGA-SDSSVAVYDVQ----RATDYEGGGHIAKHRSVFVVDKQHE------ 99
VD+T++ L++G +DS+V V+ V R+ + S V+++ +
Sbjct: 476 VDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASE 535
Query: 100 ----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMS 154
+GH + A + P D ++ S D V++W ++ +K V+ T S
Sbjct: 536 LKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P + ++ G + V RL + +GH + + +S ++ TG D
Sbjct: 595 PYG--YYFVSGGHDRV-ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV-ATGSADRT 650
Query: 215 IRFWDIRRAGCFRV 228
+R WD+ C R+
Sbjct: 651 VRLWDVLNGNCVRI 664
Score = 72 (30.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
T H G + L + +G +L + +D R+ LWD+ G
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 701
Score = 64 (27.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H V L+ + DG L S D+ +RLWD
Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 156 (60.0 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH ++ ++P ++ TGS D V++WD NC R+ K G ++ SP
Sbjct: 626 GHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHK--GPIHSLTFSP-- 680
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+ +A G D +V L DI G + L GH D + ++ +S E IL +G D +R
Sbjct: 681 -NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRL 738
Query: 218 WDIRRA 223
WD +A
Sbjct: 739 WDAVKA 744
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/194 (21%), Positives = 81/194 (41%)
Query: 51 VDLTEERYLLSGA-SDSSVAVYDVQ----RATDYEGGGHIAKHRSVFVVDKQHE------ 99
VD+T++ L++G +DS+V V+ V R+ + S V+++ +
Sbjct: 477 VDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASE 536
Query: 100 ----HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMS 154
+GH + A + P D ++ S D V++W ++ +K V+ T S
Sbjct: 537 LKILYGHSGPVYGASFSP-DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 595
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P + ++ G + V RL + +GH + + +S ++ TG D
Sbjct: 596 PYG--YYFVSGGHDRV-ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV-ATGSADRT 651
Query: 215 IRFWDIRRAGCFRV 228
+R WD+ C R+
Sbjct: 652 VRLWDVLNGNCVRI 665
Score = 72 (30.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 336
T H G + L + +G +L + +D R+ LWD+ G
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 702
Score = 64 (27.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H V L+ + DG L S D+ +RLWD
Sbjct: 711 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 122 (48.0 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 36/116 (31%), Positives = 58/116 (50%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRL-QTSKPIQLATT 359
+AH G ++ + +D + S+G D+ LWD+E+G+ +TV L T + LA +
Sbjct: 140 SAHTGYLSCCRFLDDNSIVTSSG-DTTCALWDIETGQQ-----KTVFLGHTGDCMSLAVS 193
Query: 360 QDPAVVFVP--CMTAVKAFDIWSGKTCL-TFRGHYEYVNCCCFSSQDQELYTGGND 412
D +F+ C K +D+ G TC TF GH +N CF + + TG +D
Sbjct: 194 PD-FKLFISGACDATAKLWDVREG-TCRQTFSGHESDINAICFFPNGEAICTGSDD 247
Score = 71 (30.1 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 184 QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+TL GH I + WST S+ +LV+ DG + WD
Sbjct: 49 RTLRGHLAKIYAMHWSTDSK-LLVSASQDGKLIVWD 83
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 154 (59.3 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H +SS + L TG D V +W N +M+ + G L
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS--LTGHTSPVESVRLNTPEE 76
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
LI AG++ +R+ D+ + I +TL GH+ I ++++ E++ +G D I+ WDIR
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIR 135
Query: 222 RAGC-FRVLDQSQS 234
R GC FR SQ+
Sbjct: 136 RKGCVFRYRGHSQA 149
Score = 145 (56.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 67/240 (27%), Positives = 101/240 (42%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD V ++ + R SP
Sbjct: 103 GHKANICSLDFHPY--GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + GH + VE+ + E++L +G D IRFW
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFW 216
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQS---S 275
D+ + F+V+ + + G P+ S G S P+ R G GV +S S
Sbjct: 217 DLEK---FQVVSCIEGEPG---PVRYAGSWVVGL--SPPPKVVGCRY--GAGVSRSHHRS 266
Query: 276 VGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS-RIRLWDVE 334
P + P L R T H + DG L S DS R+ W+ E
Sbjct: 267 CSLFPGLPTA----FPDFL----RPTPHSRLPRSVLFNPDGCCLYSGCQDSLRVYGWEPE 318
Score = 51 (23.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H + S++++ T E +++G+ S+ V+D++ A
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA 95
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 113 PVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQ 171
P T + GS DH VK+WD +++ ++++ G V + P + + +I A + D
Sbjct: 196 PNGTCIASAGS-DHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP--SGNYIITASS-DGT 251
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+++ D+ G + TL GH + TV +S E + +GG D + W
Sbjct: 252 LKILDLLEGRLIYTLQGHTGPVFTVSFSKGGE-LFSSGGADTQVLLW 297
Score = 102 (41.0 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK---VYRTAMSPLA 157
GHK AI+S + P L T S+D ++ +W NC F+ G V SPL
Sbjct: 16 GHKAAITSVDFSPSGKQL-ATASWDTFLMLW--NCKPQARAFRYVGHKDVVTSVQFSPLG 72
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
L+A+ + D VRL S H + +V++S ++ L T D +I+
Sbjct: 73 N---LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQF-LATASEDKSIKV 128
Query: 218 WDIRR 222
W++ R
Sbjct: 129 WNMYR 133
Score = 97 (39.2 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVK 374
+G + SAGSD +++WD+ N L+ V + + + ++ +K
Sbjct: 197 NGTCIASAGSDHTVKIWDIRV--NKLLQHYQVHSGGVNCVSFHPSGN-YIITASSDGTLK 253
Query: 375 AFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D+ G+ T +GH V FS + +GG D Q+L+W
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 58 (25.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR 337
H G V + G Y+++A SD +++ D+ GR
Sbjct: 227 HSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGR 261
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 49/179 (27%), Positives = 83/179 (46%)
Query: 56 ERYLLSGASDSSVAVYDVQRATDYEGGGHIAK-H-RSVFVVDKQHEHGHKYAISSAIWYP 113
E L++ + D S+ ++D +AT G + K H + V+ VD G +
Sbjct: 75 EHVLVTCSGDGSLQLWDTAKAT---GPLQVYKEHTQEVYSVDWSQTRGEQ---------- 121
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQV 172
L V+GS+D VKVWD + F+ +Y T SP A+G D +
Sbjct: 122 ----LVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASG--DQTL 175
Query: 173 RLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR--RAGCFRVL 229
R+ D+ + + + H+ I++ +W +E ++VTG D ++R WD+R R F +L
Sbjct: 176 RIWDVKTAGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELL 234
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 128 (50.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 101 GHKYAISSAIWYPV-DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
GH A++ + P D+ L +TGS D V VW + K T ++ A+
Sbjct: 937 GHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHVGLRERRAHIKNAHTAPITGVAA-GAN 995
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+ LI + +ED + + D+ASG + ++ HR + + + + + +L++GG D I WD
Sbjct: 996 NTLIISSSEDASIAITDLASGKLRHRITHHRGPVSGIVVAGACD-VLISGGLDRTICVWD 1054
Query: 220 I 220
+
Sbjct: 1055 L 1055
Score = 83 (34.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 25/134 (18%), Positives = 59/134 (44%)
Query: 294 LSSQDR--ATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTS 351
L+ +D + +H +T +++ D ++++S D +++W G+ + V T
Sbjct: 1364 LTQEDEKYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHSDAVTC 1423
Query: 352 KPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGN 411
+ + T + + M + +D+ +G+ T GH V S+ +G +
Sbjct: 1424 VAVSV-TNKTQVLSGSKDMNLI-LWDLLTGEEVHTLAGHLGPVIGVKVSADGSTAVSGSD 1481
Query: 412 DRQILVWCPSRHIS 425
D+ ++VW R ++
Sbjct: 1482 DKTLIVWETKRGLA 1495
Score = 64 (27.6 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 21/117 (17%), Positives = 50/117 (42%)
Query: 305 GAVTGLKVTEDGMYLLSAGSDSRIRLWDV--ESGRNTLVNFETVRLQTSKPIQLATTQDP 362
G L VT + + +S D+ +++W + E + ++ + + + T I +
Sbjct: 1336 GPYKSLSVTNNMRFAVSTNGDNTLKIWSLTQEDEKYSVSHSDEI---TCFEISADSVH-- 1390
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQ-ELYTGGNDRQILVW 418
++ ++K + GK GH + V C S ++ ++ +G D +++W
Sbjct: 1391 -IISGSRDMSLKVWQATGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILW 1446
Score = 47 (21.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 22/87 (25%), Positives = 34/87 (39%)
Query: 232 SQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSV--GRIPAKGSVR-QR 288
SQ+ LG L + + R+P +R N RQ+S+ R+ + Q
Sbjct: 1623 SQANLGPEQAALAQSQHFDQLEALWNKRSPPRRRHNAGLSRQTSLVEDRLESSDDDEYQD 1682
Query: 289 LHPGMLSSQDRATAHYGAVTGLKVTED 315
GMLS+ H + GL+ D
Sbjct: 1683 ERAGMLSASYDNIHHLARLPGLRSLHD 1709
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 142 (55.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAA 158
GH+ IS ++P +G F+ + S+D ++WD + + ++ + K V+ +
Sbjct: 263 GHERRISDVKYHP--SGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQ---C 317
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+ +G D L DI SG+ TL+GH I TV WS + + + TGG DG I W
Sbjct: 318 DGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNG-YQVATGGGDGIINVW 376
Query: 219 DIRR 222
DIR+
Sbjct: 377 DIRK 380
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 332
H + L ++ + +L+S G D I+LW+
Sbjct: 436 HTDKIISLDISNNSHFLVSGGWDRSIKLWN 465
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/135 (29%), Positives = 66/135 (48%)
Query: 102 HKYAISSAIWYPVDTG-LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
H +SS + TG L TG D V VW N VM+ + G ++A
Sbjct: 19 HSSNVSSLV-LGKSTGRLLATGGDDCRVNVWSVNKPNCVMS--LTGHTTPIESLQISAKE 75
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
LI AG++ +R+ D+ + I +TL GH+ I ++++ ++ +G D I+ WD+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDV 134
Query: 221 RRAGC-FRVLDQSQS 234
RR GC F+ +Q+
Sbjct: 135 RRKGCIFKYKSHTQA 149
Score = 125 (49.1 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA-MSPLAA 158
GHK I S ++P G FV +GS D +K+WD + +K + R SP
Sbjct: 103 GHKANICSLDFHPY--GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP--- 157
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+ +D V+L D+ +G + +GH + VE+ S E+ L IRFW
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPS-EYPLAGSPVHRTIRFW 216
Query: 219 DIRR 222
D+ +
Sbjct: 217 DLEK 220
Score = 57 (25.1 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRA 76
H I SLQ+ EE +++G+ S+ V+D++ A
Sbjct: 62 HTTPIESLQISAKEE-LIVAGSQSGSIRVWDLEAA 95
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 109 (43.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
+GH+ A++S + Y G +GS D V +WD + K A+ L
Sbjct: 104 NGHRAAVTS-LKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALF-LRER 161
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
++L+ +G +D V+ D+ + +T+ GHR + + S E L+TG D +R WD
Sbjct: 162 NLLVTSG-KDTMVKWWDLDNQHCFKTMVGHRTEVWGLVL-VSEETRLITGAADSELRAWD 219
Query: 220 I 220
I
Sbjct: 220 I 220
Score = 108 (43.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 41/194 (21%), Positives = 81/194 (41%)
Query: 26 RLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHI 85
+L L N E ++ H G++ S+ + ++R ++G +D +V +D + TD
Sbjct: 478 QLYDLASGNLLETIAAHDGALWSMSLS-PDQRGFVTGGADKAVKFWDFELVTDKNSTQKR 536
Query: 86 AKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP 145
+ ++ Q + Y + Y D L D VK++ + + ++ +
Sbjct: 537 LSVKQTRIL--QLDEDVLY-----VCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLS--LY 587
Query: 146 GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWI 205
G ++ LIA G+ D V++ + G ++L H D +M + + S +
Sbjct: 588 GHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSH-L 646
Query: 206 LVTGGCDGAIRFWD 219
T G D I+ WD
Sbjct: 647 FFTAGKDHKIKQWD 660
Score = 105 (42.0 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 128 VKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS 187
VK+W+ + + + MP + Y S + GT+ ++L D+ASG + +T++
Sbjct: 437 VKIWNRSTLQCIRT--MPCE-YALC-SFFVPGDRQVVIGTKTGNMQLYDLASGNLLETIA 492
Query: 188 GHRDGIMTVEWSTS---SEWILVTGGCDGAIRFWD 219
H DG + WS S + VTGG D A++FWD
Sbjct: 493 AH-DGAL---WSMSLSPDQRGFVTGGADKAVKFWD 523
Score = 96 (38.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 31/125 (24%), Positives = 58/125 (46%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE--SGRNTLVNFETVR----LQTSKPI- 354
AH GA+ + ++ D ++ G+D ++ WD E + +N+ +V+ LQ + +
Sbjct: 493 AHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRILQLDEDVL 552
Query: 355 QLATTQDPAVVFVPCMTA-VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDR 413
+ + D ++ V + VK F + + K L+ GH V C S + TG DR
Sbjct: 553 YVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADR 612
Query: 414 QILVW 418
+ +W
Sbjct: 613 NVKIW 617
Score = 96 (38.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 21/83 (25%), Positives = 43/83 (51%)
Query: 149 YRTAMSPLAASHM--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWIL 206
+R A++ L + +A+G++D V + D+ + + L GH+D + + +L
Sbjct: 106 HRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERN-LL 164
Query: 207 VTGGCDGAIRFWDIRRAGCFRVL 229
VT G D +++WD+ CF+ +
Sbjct: 165 VTSGKDTMVKWWDLDNQHCFKTM 187
Score = 87 (35.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 33/147 (22%), Positives = 69/147 (46%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMSPLAASHMLIAAGTEDVQVR 173
+ G +V +V +WD ++ + G K T + P + + +A G ED +R
Sbjct: 34 EKGRYVAVPACEHVFIWDLRKGEKILILQ--GLKQEVTCLCP-SPDGLHLAVGYEDGAIR 90
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD-IRRAGCFRVLDQS 232
+ + SG + T +GHR + ++++ L +G D + WD I +G +R+ +
Sbjct: 91 VFSLLSGEGNITFNGHRAAVTSLKYDQLGGR-LASGSKDTDVIIWDVINESGLYRL--KG 147
Query: 233 QSQLGRRPPLLKRKSL--SAGQNSSVK 257
+ L+ ++L ++G+++ VK
Sbjct: 148 HKDAVTQALFLRERNLLVTSGKDTMVK 174
Score = 72 (30.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 27/116 (23%), Positives = 48/116 (41%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDP 362
H V L + D + +LSA ++S +++W+ R+TL T+ + + D
Sbjct: 413 HRSDVRTLSFSSDNIAVLSAAAES-VKIWN----RSTLQCIRTMPCEYAL-CSFFVPGDR 466
Query: 363 AVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
VV ++ +D+ SG T H + S + TGG D+ + W
Sbjct: 467 QVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFW 522
Score = 71 (30.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQ--LATTQ 360
H+ + L V+ G Y++SA D +RLW E R L+ E LQ + +A +
Sbjct: 673 HHQEIWCLAVSPSGDYVVSASHDKSLRLW--ERTREPLILEEERELQREAEYEESVAKEE 730
Query: 361 DPAV 364
PAV
Sbjct: 731 QPAV 734
Score = 62 (26.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 20/120 (16%), Positives = 49/120 (40%)
Query: 303 HYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG---RNTLVNFETVRLQTSKPIQLATT 359
H V + ++ DG + + +D +++W ++ G R+ + ++V + L
Sbjct: 589 HKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSV-------MHLRFV 641
Query: 360 QDPAVVFVPCMT-AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+ F +K +D + T GH++ + C S + + +D+ + +W
Sbjct: 642 PKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 59 (25.8 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD-YEGGGHI-AKHRSVFVVDKQH- 98
H+ ++ SL+ D R L SG+ D+ V ++DV + Y GH A +++F+ ++
Sbjct: 106 HRAAVTSLKYDQLGGR-LASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLL 164
Query: 99 -EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVW 131
G + W+ +D H +VW
Sbjct: 165 VTSGKDTMVK---WWDLDNQHCFKTMVGHRTEVW 195
Score = 58 (25.5 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
T+ GHR + T+ S SS+ I V +++ W+ C R +
Sbjct: 409 TIGGHRSDVRTL--SFSSDNIAVLSAAAESVKIWNRSTLQCIRTM 451
Score = 53 (23.7 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDV 73
+K +V H+ + L V ++EE L++GA+DS + +D+
Sbjct: 184 FKTMVG-HRTEVWGL-VLVSEETRLITGAADSELRAWDI 220
Score = 51 (23.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 334
AH +V L+ +AG D +I+ WD +
Sbjct: 630 AHDDSVMHLRFVPKSHLFFTAGKDHKIKQWDAD 662
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/170 (25%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG I +++F GH + W+ +
Sbjct: 190 HLLSASDDHTVCLWDIS-AGPKEG--KIVDAKAIFT-------GHSAVVEDVAWHLLHES 239
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + + H+D I V WS +E IL + G D + WD+ + G
Sbjct: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 349
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/170 (25%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG + ++VF GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDIS-AGPKEG--KVVDAKAVFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + + H+D I V WS +E IL + G D + WD+ + G
Sbjct: 301 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/139 (30%), Positives = 68/139 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH + ++P ++ TGS D V++W N R+ + G V + SP
Sbjct: 424 GHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR--GPVLSLSFSP-- 478
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
L +AG ED +++L D+ASG + + L GH D I ++ +S S ++ + D ++R
Sbjct: 479 NGKYLASAG-EDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSG-LIASASMDNSVRV 536
Query: 218 WDIRRAGCFRVLDQSQSQL 236
WDIR C D S +L
Sbjct: 537 WDIRSTCCNTPADGSSGEL 555
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 132 (51.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
+GH + PVD F+TGS D +KVWD + + + G V ++
Sbjct: 136 NGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGK--LKTTLAGHVMTVRDVAVSDR 193
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
H + + +ED V+ D+ I + GH G+ TV + + ++ T G D I+ WD
Sbjct: 194 HPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLD-LIATAGRDSVIKLWD 252
Query: 220 IR 221
+R
Sbjct: 253 MR 254
Score = 102 (41.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 35/124 (28%), Positives = 60/124 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GHK I+ PVD + V+ S D V++WD +V+ + K V TA+ P
Sbjct: 264 GHKGPINQVQCTPVDPQV-VSSSTDATVRLWDVVAGKTMKVLTHHKR--SVRATALHPKE 320
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
S + +A T+D+ R +A G++ + GI+ S + + +L GG +G + F
Sbjct: 321 FS--VASACTDDI--RSWGLAEGSLLTNFESEKTGIINT-LSINQDDVLFAGGDNGVLSF 375
Query: 218 WDIR 221
+D +
Sbjct: 376 YDYK 379
Score = 71 (30.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 15/71 (21%), Positives = 38/71 (53%)
Query: 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT-DYEGGGHIAKHRSVFVVDK 96
+++ H G + + +D + + ++G++D+++ V+D+ GH+ R V V D+
Sbjct: 134 VINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDR 193
Query: 97 QHEHGHKYAIS 107
H + +++S
Sbjct: 194 ---HPYLFSVS 201
Score = 63 (27.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/127 (29%), Positives = 51/127 (40%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ 360
T H +V + + SA +D IR W + G + L NFE+ + T L+ Q
Sbjct: 305 THHKRSVRATALHPKEFSVASACTDD-IRSWGLAEG-SLLTNFESEK--TGIINTLSINQ 360
Query: 361 DPAVVFVPCMTAVKAF-DIWSGKT--CLTFR---GHYE---YVNCCCFSSQDQELYTGGN 411
D V+F V +F D SG L R G E V C F L TG
Sbjct: 361 DD-VLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEA 419
Query: 412 DRQILVW 418
D+ I +W
Sbjct: 420 DKSIKIW 426
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 157 HLLSASDDHTICLWDIS-AVPKEG--KVVDAKTIFT-------GHTAVVEDVSWHLLHES 206
Query: 118 LFVTGSYDHYVKVWDT---NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
LF + + D + +WDT N ++ + +V + +P S ++A G+ D V
Sbjct: 207 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--SEFILATGSADKTVA 264
Query: 174 LCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 265 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 316
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 69/330 (20%), Positives = 134/330 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ ++ I++PV + + V+ S D +KVWD +F+ K + ++ ++ H
Sbjct: 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDH 160
Query: 161 M--LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
L+A+ + D+ ++L D +T+ GH + +V + + I V+ D I+ W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASRDKTIKMW 219
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 278
+++ C + G R + + + Q+ ++ +N VR V
Sbjct: 220 EVQTGYCVKTFT------GHREWV---RMVRPNQDGTLIASC-----SNDQTVRVWVVAT 265
Query: 279 IPAKGSVRQRLHP-GMLS-SQDRATAHYGAVTGLKVTEDGM---YLLSAGSDSRIRLWDV 333
K +R+ H +S + + + + TG + + G +LLS D I++WD+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDI 325
Query: 334 ESGR--NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GKTCL-TFR 388
+G TLV + ++ + C K +W K C+ T
Sbjct: 326 STGMCLMTLVGHDNW-------VRGVLFHSGGKFILSCADD-KTLRVWDFKNKRCMKTLN 377
Query: 389 GHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
H +V F + TG D+ + VW
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 115 (45.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 97 QHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSP 155
QH HG ++ + + P D +T S D V VW T R++ G V SP
Sbjct: 24 QH-HGE---VNCSAFSP-DGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP 78
Query: 156 LAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215
LIA+ + D +RL D+A L GH+ + TV +S S+ L +GG D
Sbjct: 79 ---DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ-LASGGWDKRA 134
Query: 216 RFWDIR 221
W+++
Sbjct: 135 IVWEVQ 140
Score = 75 (31.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 26/103 (25%), Positives = 45/103 (43%)
Query: 320 LSAGS-DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDI 378
L+ GS DS + +WD+ + +V++ + T L + A + + K +
Sbjct: 167 LATGSWDSTVHIWDLRAS-TPVVSYHNLEGHTGNISCLCYS---ASGLLASGSWDKTICV 222
Query: 379 WSGKTC---LTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
W T L +GH +VN FS + +L + G R + VW
Sbjct: 223 WKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/107 (30%), Positives = 54/107 (50%)
Query: 113 PVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMSPLAASHMLIAAGTEDVQ 171
P T + GS DH VK+WD +++ ++++ V + PL S L+ A + D
Sbjct: 196 PNGTCIASAGS-DHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNS--LVTASS-DGT 251
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
V++ D+ G + TL GH + TV +S E +L +GG D + W
Sbjct: 252 VKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGE-LLTSGGADAQVLIW 297
Score = 106 (42.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 29/104 (27%), Positives = 47/104 (45%)
Query: 315 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVK 374
+G + SAGSD +++WD+ N L+ V + + ++V VK
Sbjct: 197 NGTCIASAGSDHAVKIWDIRM--NKLLQHYQVHSCGVNCLSFHPLGN-SLVTASSDGTVK 253
Query: 375 AFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
D+ G+ T +GH V FS + L +GG D Q+L+W
Sbjct: 254 MLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 91 (37.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GHK AI+SA + P + T S+D ++ +W + + K T++ +
Sbjct: 16 GHKAAITSADFSP-NCKQIATASWDTFLMLWSLKPHARAYRY-VGHKDVVTSLQ-FSPQG 72
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L+A+ + D VRL + S H + +V++S + +LVT D +I+ W +
Sbjct: 73 NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQ-LLVTASEDKSIKVWSM 131
Query: 221 RR 222
R
Sbjct: 132 FR 133
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 96 KQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRT-AMS 154
+Q GH + S + P D L +GS+D V++WD + + R+ A S
Sbjct: 730 QQTLEGHSGWVLSVAFSP-DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFS 788
Query: 155 PLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
P L+A+G+ D VRL D A+G++ QTL GH D + +V +S +L +G D
Sbjct: 789 P---DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGR-LLASGSFDKT 844
Query: 215 IRFWD 219
+R WD
Sbjct: 845 VRLWD 849
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/114 (31%), Positives = 58/114 (50%)
Query: 107 SSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAA 165
S+++W + +GS D V++WD + + G V A SP L+A+
Sbjct: 703 SNSVW-----AVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSP---DGRLLAS 754
Query: 166 GTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
G+ D VRL D A+G++ QTL GH + + +V +S +L +G D +R WD
Sbjct: 755 GSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGR-LLASGSFDKTVRLWD 807
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 47/171 (27%), Positives = 82/171 (47%)
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
++A+G++D VRL D A+G++ QTL GH +++V +S +L +G D +R WD
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGR-LLASGSFDKTVRLWDPA 767
Query: 222 RAGCFRVLDQSQSQLGRRPPLLKR-KSLSAGQ-NSSVKPRAPQ----KRSANGNG--VRQ 273
+ L + S R + L++G + +V+ P +++ G+ VR
Sbjct: 768 TGSLQQTL-RGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRS 826
Query: 274 ---SSVGRIPAKGSVRQ--RLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL 319
S GR+ A GS + RL + + G VT L+ ++DG Y+
Sbjct: 827 VAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQFSQDGSYI 877
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 45/174 (25%), Positives = 77/174 (44%)
Query: 55 EERYLLSGASDSSVAVYDVQR-ATDYEGGGHIAKHRSVFVVDKQHEH-GHKYAISSAIWY 112
+E YLLSG+ D + ++DV ATD V++ H + GH+ I W+
Sbjct: 181 KEGYLLSGSQDQRICLWDVSATATDK-------------VLNPMHVYEGHQSIIEDVAWH 227
Query: 113 PVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTEDVQ 171
+ +F + D + +WD ++ K+ + + + +P + ++A + D
Sbjct: 228 MKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPF--NEWVLATASSDST 285
Query: 172 VRLCDIAS-GAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
V L D+ A LS H + VEW + E +L + G D + WDI R G
Sbjct: 286 VALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVG 339
Score = 115 (45.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 33/145 (22%), Positives = 63/145 (43%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRV--VMNFKMPGKVYRTAMSPL-- 156
GH+ W G ++GS D + +WD + T V+N P VY S +
Sbjct: 167 GHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLN---PMHVYEGHQSIIED 223
Query: 157 AASHM----LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCD 212
A HM + + +D Q+ + D+ + + + H I + ++ +EW+L T D
Sbjct: 224 VAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSD 283
Query: 213 GAIRFWDIRRAGC-FRVLDQSQSQL 236
+ +D+R+ VL + + ++
Sbjct: 284 STVALFDLRKLTAPLHVLSKHEGEV 308
Score = 46 (21.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 319 LLSAGSDSRIRLWDV 333
L S+G D R+ +WD+
Sbjct: 321 LASSGEDRRLMVWDI 335
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 192 HLLSASDDHTICLWDIS-AVPKEG--KVVDAKTIFT-------GHTAVVEDVSWHLLHES 241
Query: 118 LFVTGSYDHYVKVWDT---NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
LF + + D + +WDT N ++ + +V + +P S ++A G+ D V
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--SEFILATGSADKTVA 299
Query: 174 LCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 192 HLLSASDDHTICLWDIS-AVPKEG--KVVDAKTIFT-------GHTAVVEDVSWHLLHES 241
Query: 118 LFVTGSYDHYVKVWDT---NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
LF + + D + +WDT N ++ + +V + +P S ++A G+ D V
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--SEFILATGSADKTVA 299
Query: 174 LCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 192 HLLSASDDHTICLWDIS-AVPKEG--KVVDAKTIFT-------GHTAVVEDVSWHLLHES 241
Query: 118 LFVTGSYDHYVKVWDT---NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
LF + + D + +WDT N ++ + +V + +P S ++A G+ D V
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--SEFILATGSADKTVA 299
Query: 174 LCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 192 HLLSASDDHTICLWDIS-AVPKEG--KVVDAKTIFT-------GHTAVVEDVSWHLLHES 241
Query: 118 LFVTGSYDHYVKVWDT---NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
LF + + D + +WDT N ++ + +V + +P S ++A G+ D V
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--SEFILATGSADKTVA 299
Query: 174 LCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 192 HLLSASDDHTICLWDIS-AVPKEG--KVVDAKTIFT-------GHTAVVEDVSWHLLHES 241
Query: 118 LFVTGSYDHYVKVWDT---NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
LF + + D + +WDT N ++ + +V + +P S ++A G+ D V
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--SEFILATGSADKTVA 299
Query: 174 LCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 192 HLLSASDDHTICLWDIS-AVPKEG--KVVDAKTIFT-------GHTAVVEDVSWHLLHES 241
Query: 118 LFVTGSYDHYVKVWDT---NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
LF + + D + +WDT N ++ + +V + +P S ++A G+ D V
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--SEFILATGSADKTVA 299
Query: 174 LCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 43/170 (25%), Positives = 75/170 (44%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ A EG + +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDIS-AGPKEG--KVVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
D+ + + + H+D I V WS +E IL + G D + WD+ + G
Sbjct: 301 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 192 HLLSASDDHTICLWDIS-AVPKEG--KVVDAKTIFT-------GHTAVVEDVSWHLLHES 241
Query: 118 LFVTGSYDHYVKVWDT---NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
LF + + D + +WDT N ++ + +V + +P S ++A G+ D V
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--SEFILATGSADKTVA 299
Query: 174 LCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/172 (24%), Positives = 80/172 (46%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D ++ ++D+ A EG + +++F GH + W+ +
Sbjct: 192 HLLSASDDHTICLWDIS-AVPKEG--KVVDAKTIFT-------GHTAVVEDVSWHLLHES 241
Query: 118 LFVTGSYDHYVKVWDT---NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
LF + + D + +WDT N ++ + +V + +P S ++A G+ D V
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--SEFILATGSADKTVA 299
Query: 174 LCDIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
L D+ + + + H+D I V+WS +E IL + G D + WD+ + G
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 104 (41.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/116 (27%), Positives = 56/116 (48%)
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173
D L +G D +++W + ++ F G V T M+ ++L++ G++D +V
Sbjct: 70 DGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSV--TTMTFNRLGNILVS-GSKDTEVI 126
Query: 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ DI + + L GHRD I +V+ S L+T DG I+ WD C + +
Sbjct: 127 VWDIITESGLFRLRGHRDQITSVKLLERSNH-LITSSKDGFIKIWDTETQHCIQTI 181
Score = 100 (40.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 302 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE------SGRNTLVNF---ETVRLQTSK 352
AH G+V L +T D + S G+D ++ WD E + ++ ++N +T++++ S
Sbjct: 475 AHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIASQENSKHKVLNLSLTKTLKVE-SD 533
Query: 353 PIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGN 411
+ L + D + V + VK F + K L+ GH V C S + TG
Sbjct: 534 VLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSA 593
Query: 412 DRQILVW 418
D+ I +W
Sbjct: 594 DKNIKIW 600
Score = 99 (39.9 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 28/114 (24%), Positives = 56/114 (49%)
Query: 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH--MLIAAGTEDVQVRLC 175
L +TG + + +WD + V+N + + + ++ + S L+A+G D +R+
Sbjct: 30 LAITGCGER-ISIWDLR--KQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIW 86
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI-RRAGCFRV 228
++ + +GHR + T+ ++ ILV+G D + WDI +G FR+
Sbjct: 87 SMSDYQLQAVFNGHRGSVTTMTFNRLGN-ILVSGSKDTEVIVWDIITESGLFRL 139
Score = 94 (38.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 34/122 (27%), Positives = 64/122 (52%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMSPLAA 158
+GH+ ++++ + + + V+GS D V VWD T + F++ G + T++ L
Sbjct: 98 NGHRGSVTTMTFNRLGN-ILVSGSKDTEVIVWDI-ITESGL-FRLRGHRDQITSVKLLER 154
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
S+ LI + ++D +++ D + QT+ GHR+ I ++ + E L + D IRFW
Sbjct: 155 SNHLITS-SKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPD-ETRLCSCTSDNQIRFW 212
Query: 219 DI 220
I
Sbjct: 213 RI 214
Score = 60 (26.2 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 15/64 (23%), Positives = 34/64 (53%)
Query: 168 EDVQVRLCDIASGA--ISQTL--SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
E +++ + GA +S TL +GHR I ++ S++ + ++ T +++ W+++
Sbjct: 370 EAYEIKEKEQGGGAFEVSSTLDQAGHRSDIRSLSLSSNDQMLVSTSS--ESVKVWNMKSL 427
Query: 224 GCFR 227
C R
Sbjct: 428 SCIR 431
Score = 56 (24.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 16/70 (22%), Positives = 39/70 (55%)
Query: 32 LSNYK--EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD-YEGGGHIAKH 88
+S+Y+ + + H+GS+ ++ + L+SG+ D+ V V+D+ + + GH +
Sbjct: 88 MSDYQLQAVFNGHRGSVTTMTFNRLGN-ILVSGSKDTEVIVWDIITESGLFRLRGHRDQI 146
Query: 89 RSVFVVDKQH 98
SV ++++ +
Sbjct: 147 TSVKLLERSN 156
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 49/179 (27%), Positives = 83/179 (46%)
Query: 56 ERYLLSGASDSSVAVYDVQRATDYEGGGHIAK-H-RSVFVVDKQHEHGHKYAISSAIWYP 113
E L++ + D S+ ++D +AT G + K H + V+ VD G +
Sbjct: 75 EHVLVTCSGDGSLQLWDTAKAT---GPLQVYKEHTQEVYSVDWSQTRGEQ---------- 121
Query: 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQV 172
L V+GS+D VKVWD + F+ +Y T SP A+G D +
Sbjct: 122 ----LVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASG--DQTL 175
Query: 173 RLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR--RAGCFRVL 229
R+ D+ + + + H+ I++ +W +E ++VTG D ++R WD+R R F +L
Sbjct: 176 RIWDVKTTGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELL 234
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 118 (46.6 bits), Expect = 0.00088, P = 0.00088
Identities = 55/238 (23%), Positives = 91/238 (38%)
Query: 186 LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKR 245
L GH + WS S+ +L +G D R W I G F+ + GR L
Sbjct: 261 LEGHTSEVCACAWSPSAS-LLASGSGDATARIWSIPE-GSFKAV-----HTGRNINALIL 313
Query: 246 KSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYG 305
K N K + NG G ++ G + + L+ ++S+ + H G
Sbjct: 314 KHAKGKSNE--KSKDVTTLDWNGEGTLLAT-GSCDGQARI-WTLNGELISTLSK---HKG 366
Query: 306 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE-----TVRLQTSKPIQLATTQ 360
+ LK + G YLL+ D +WDV++ FE T+ + + AT+
Sbjct: 367 PIFSLKWNKKGDYLLTGSVDRTAVVWDVKA-EEWKQQFEFHSGPTLDVDWRNNVSFATSS 425
Query: 361 DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
+++++ C I + TF GH VNC + L + +D +W
Sbjct: 426 TDSMIYL-CK-------IGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Score = 112 (44.5 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 31/128 (24%), Positives = 60/128 (46%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAAS 159
GH+ ++ W P + L + S D K+W+ + V + + K +Y SP
Sbjct: 446 GHQGEVNCVKWDPTGS-LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPG 504
Query: 160 ------HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDG 213
+ +A+ + D V+L D G + + +GHR+ + ++ +S + E+I +G D
Sbjct: 505 TNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYI-ASGSLDK 563
Query: 214 AIRFWDIR 221
+I W I+
Sbjct: 564 SIHIWSIK 571
Score = 106 (42.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/124 (25%), Positives = 49/124 (39%)
Query: 301 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG------RNTLVNFETVRLQTSKPI 354
T H G V +K G L S DS ++W+++ R T+R + P
Sbjct: 445 TGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPG 504
Query: 355 QLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQ 414
+ + + VK +D GK +F GH E V FS + + +G D+
Sbjct: 505 TNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKS 564
Query: 415 ILVW 418
I +W
Sbjct: 565 IHIW 568
Score = 93 (37.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/136 (22%), Positives = 55/136 (40%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT------------NCTRVVMNF---KMP 145
GH + + W P L +GS D ++W N +++ K
Sbjct: 263 GHTSEVCACAWSP-SASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSN 321
Query: 146 GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWI 205
K L+A G+ D Q R+ + +G + TLS H+ I +++W+ +++
Sbjct: 322 EKSKDVTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYL 380
Query: 206 LVTGGCDGAIRFWDIR 221
L TG D WD++
Sbjct: 381 L-TGSVDRTAVVWDVK 395
Score = 62 (26.9 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQ 74
+S HKG I SL+ + + YLL+G+ D + V+DV+
Sbjct: 361 LSKHKGPIFSLKWNKKGD-YLLTGSVDRTAVVWDVK 395
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/132 (28%), Positives = 63/132 (47%)
Query: 102 HKYAISSAIWYPV-DTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAAS 159
H + S W L V+GS+D VK+WD + + F+ +Y T SP
Sbjct: 110 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIPG 169
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
A+G D +R+ D+ + + + H+ I++ +W +E +LVTG D ++R WD
Sbjct: 170 CFASASG--DQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWD 227
Query: 220 IR--RAGCFRVL 229
+R R F +L
Sbjct: 228 LRNVRQPVFELL 239
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 122 (48.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 267 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 326
+GN V + + + S++ R G + +AH G ++ + +D + S+G D+
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSR--EGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DT 164
Query: 327 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP--CMTAVKAFDIWSGKTC 384
LWD+E+G+ V F T + LA + D +F+ C + K +D+ G TC
Sbjct: 165 TCALWDIETGQQKTV-FVG---HTGDCMSLAVSPD-FKLFISGACDASAKLWDVREG-TC 218
Query: 385 L-TFRGHYEYVNCCCFSSQDQELYTGGND 412
TF GH +N CF + + TG +D
Sbjct: 219 RQTFTGHESDINAICFFPNGEAICTGSDD 247
Score = 68 (29.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 184 QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+TL GH I + W+T S+ +LV+ DG + WD
Sbjct: 49 RTLRGHLAKIYAMHWATDSK-LLVSASQDGKLIVWD 83
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 122 (48.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 267 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 326
+GN V + + + S++ R G + +AH G ++ + +D + S+G D+
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSR--EGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DT 164
Query: 327 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP--CMTAVKAFDIWSGKTC 384
LWD+E+G+ V F T + LA + D +F+ C + K +D+ G TC
Sbjct: 165 TCALWDIETGQQKTV-FVG---HTGDCMSLAVSPD-FKLFISGACDASAKLWDVREG-TC 218
Query: 385 L-TFRGHYEYVNCCCFSSQDQELYTGGND 412
TF GH +N CF + + TG +D
Sbjct: 219 RQTFTGHESDINAICFFPNGEAICTGSDD 247
Score = 68 (29.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 184 QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+TL GH I + W+T S+ +LV+ DG + WD
Sbjct: 49 RTLRGHLAKIYAMHWATDSK-LLVSASQDGKLIVWD 83
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 122 (48.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 267 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 326
+GN V + + + S++ R G + +AH G ++ + +D + S+G D+
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSR--EGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DT 164
Query: 327 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP--CMTAVKAFDIWSGKTC 384
LWD+E+G+ V F T + LA + D +F+ C + K +D+ G TC
Sbjct: 165 TCALWDIETGQQKTV-FVG---HTGDCMSLAVSPD-FKLFISGACDASAKLWDVREG-TC 218
Query: 385 L-TFRGHYEYVNCCCFSSQDQELYTGGND 412
TF GH +N CF + + TG +D
Sbjct: 219 RQTFTGHESDINAICFFPNGEAICTGSDD 247
Score = 68 (29.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 184 QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+TL GH I + W+T S+ +LV+ DG + WD
Sbjct: 49 RTLRGHLAKIYAMHWATDSK-LLVSASQDGKLIVWD 83
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 122 (48.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 267 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 326
+GN V + + + S++ R G + +AH G ++ + +D + S+G D+
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSR--EGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DT 164
Query: 327 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP--CMTAVKAFDIWSGKTC 384
LWD+E+G+ V F T + LA + D + F+ C + K +D+ G TC
Sbjct: 165 TCALWDIETGQQKTV-FVG---HTGDCMSLAVSPDYKL-FISGACDASAKLWDVREG-TC 218
Query: 385 L-TFRGHYEYVNCCCFSSQDQELYTGGND 412
TF GH +N CF + + TG +D
Sbjct: 219 RQTFTGHESDINAICFFPNGEAICTGSDD 247
Score = 68 (29.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 184 QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
+TL GH I + W+T S+ +LV+ DG + WD
Sbjct: 49 RTLRGHLAKIYAMHWATDSK-LLVSASQDGKLIVWD 83
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/131 (25%), Positives = 59/131 (45%)
Query: 205 ILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKSLSAGQNSSVKPRAPQKR 264
IL + G D IRFWD C R + +SQ+ R ++ L+A N VK ++
Sbjct: 4 ILASAGYDHTIRFWDALTGVCSRTIQHPESQVNRLEITSDKRFLAAAGNLYVKLYDIRQT 63
Query: 265 SANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGS 324
+GNG ++ S + + + + + H VT L+ D +++++
Sbjct: 64 GNSGNGANGTTNTSASTSSSNQNNSNNNPVMTFE---GHKNNVTSLQFQADNKWMVTSSE 120
Query: 325 DSRIRLWDVES 335
D +++WDV S
Sbjct: 121 DGTVKVWDVRS 131
Score = 105 (42.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 43/190 (22%), Positives = 78/190 (41%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEH-- 100
+ +N L++ T ++ L+ A + V +YD+++ + G + + S +
Sbjct: 32 ESQVNRLEI--TSDKRFLAAAGNLYVKLYDIRQTGNSGNGANGTTNTSASTSSSNQNNSN 89
Query: 101 --------GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA 152
GHK ++S + + D VT S D VKVWD V N+K V
Sbjct: 90 NNPVMTFEGHKNNVTS-LQFQADNKWMVTSSEDGTVKVWDVRSPSVQRNYKHQCPVNEVV 148
Query: 153 MSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEW-ILVTGGC 211
+ P LI+ +D +R+ D+ + + L D + S +S+ +LV G
Sbjct: 149 IHPNQGE--LISCD-QDGNIRVWDLGENSCTHHLIPE-DDVPINSLSVASDGSMLVAGNN 204
Query: 212 DGAIRFWDIR 221
G W ++
Sbjct: 205 KGNCYVWKMQ 214
Score = 86 (35.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/117 (23%), Positives = 47/117 (40%)
Query: 307 VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT-SKPIQLATTQDPAVV 365
+ L V DG L++ + +W +++ R+ V + ++ SK I
Sbjct: 187 INSLSVASDGSMLVAGNNKGNCYVWKMQNQRDATVLTPVTKFRSHSKYITRVLLSTDMKH 246
Query: 366 FVPCMTAVKAFDIWSGKTCL----TFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 418
C +A IWS + T +GH +V C FS+ L T +D + +W
Sbjct: 247 LATC-SADHTARIWSTEQNFNLETTLQGHQRWVWDCAFSADSAYLVTACSDHYVRLW 302
Score = 70 (29.7 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 22/106 (20%), Positives = 46/106 (43%)
Query: 293 MLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSK 352
+L+ + +H +T + ++ D +L + +D R+W E N ET +
Sbjct: 221 VLTPVTKFRSHSKYITRVLLSTDMKHLATCSADHTARIWSTEQN----FNLETTLQGHQR 276
Query: 353 PI-QLATTQDPAVVFVPCMTA-VKAFDIWSGKTCLTFRGHYEYVNC 396
+ A + D A + C V+ +D+ + +T + GH++ C
Sbjct: 277 WVWDCAFSADSAYLVTACSDHYVRLWDLSNSETVRQYNGHHKGAVC 322
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 152 (58.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 44/137 (32%), Positives = 66/137 (48%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAAS 159
GH + ++P ++ TGS D V++W T V F G V A SP
Sbjct: 436 GHLSDVDCVKFHP-NSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSP--NG 492
Query: 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
L +AG ED +++L D+ASG + + L GH D I ++ +S S ++ + D +R WD
Sbjct: 493 KYLASAG-EDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSS-LVASASMDNTVRVWD 550
Query: 220 IRRAGCFRVLDQSQSQL 236
IR A D S+L
Sbjct: 551 IRNAHGSAPTDGCSSEL 567
Score = 43 (20.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD 78
H G + LT+ LLS + DS+V +D++ T+
Sbjct: 353 HSGPVYRTAF-LTDASGLLSCSEDSTVRYWDLKSFTN 388
WARNING: HSPs involving 480 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 441 441 0.00089 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 730
No. of states in DFA: 624 (66 KB)
Total size of DFA: 298 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.44u 0.12s 36.56t Elapsed: 00:00:02
Total cpu time: 36.50u 0.12s 36.62t Elapsed: 00:00:02
Start: Sat May 11 02:41:56 2013 End: Sat May 11 02:41:58 2013
WARNINGS ISSUED: 2