Query 013546
Match_columns 441
No_of_seqs 502 out of 3899
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 12:36:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013546.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013546hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 1.4E-54 4.8E-59 453.2 27.5 323 106-440 39-500 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 1.7E-40 5.9E-45 340.6 21.6 302 109-439 2-423 (430)
3 2vdc_G Glutamate synthase [NAD 100.0 4.6E-37 1.6E-41 317.1 1.7 186 26-238 41-229 (456)
4 1gte_A Dihydropyrimidine dehyd 100.0 1.3E-33 4.4E-38 317.3 2.1 186 27-237 99-297 (1025)
5 3sx6_A Sulfide-quinone reducta 100.0 8.9E-31 3E-35 268.8 21.2 285 109-420 4-407 (437)
6 3vrd_B FCCB subunit, flavocyto 100.0 9.8E-30 3.3E-34 257.7 24.8 267 109-410 2-385 (401)
7 3h28_A Sulfide-quinone reducta 100.0 9.6E-29 3.3E-33 253.1 23.0 299 109-436 2-413 (430)
8 3klj_A NAD(FAD)-dependent dehy 100.0 2.9E-27 1E-31 238.8 20.0 216 106-344 6-292 (385)
9 4eqs_A Coenzyme A disulfide re 99.9 1.5E-26 5.1E-31 237.5 20.3 222 111-344 2-309 (437)
10 3h8l_A NADH oxidase; membrane 99.9 7.3E-26 2.5E-30 230.0 17.1 220 110-348 2-336 (409)
11 3ef6_A Toluene 1,2-dioxygenase 99.9 1.3E-25 4.4E-30 228.6 18.3 243 109-382 2-335 (410)
12 1xhc_A NADH oxidase /nitrite r 99.9 4.6E-25 1.6E-29 221.4 17.8 211 109-344 8-295 (367)
13 3lxd_A FAD-dependent pyridine 99.9 4.6E-25 1.6E-29 224.7 17.5 245 109-382 9-347 (415)
14 4gcm_A TRXR, thioredoxin reduc 99.9 4.6E-25 1.6E-29 215.5 12.8 213 109-348 6-306 (312)
15 3fg2_P Putative rubredoxin red 99.9 2.8E-24 9.4E-29 218.2 18.5 242 110-381 2-335 (404)
16 3kd9_A Coenzyme A disulfide re 99.9 4.8E-25 1.6E-29 226.9 12.2 221 109-344 3-313 (449)
17 3iwa_A FAD-dependent pyridine 99.9 7.9E-25 2.7E-29 226.6 11.5 228 109-344 3-327 (472)
18 3ics_A Coenzyme A-disulfide re 99.9 8.7E-24 3E-28 224.7 17.9 226 107-344 34-351 (588)
19 3cgb_A Pyridine nucleotide-dis 99.9 1.7E-23 5.9E-28 217.2 19.1 225 109-344 36-351 (480)
20 3ntd_A FAD-dependent pyridine 99.9 1.5E-23 5.1E-28 221.7 18.4 223 110-344 2-336 (565)
21 2bc0_A NADH oxidase; flavoprot 99.9 1.3E-23 4.3E-28 218.8 14.8 221 109-344 35-359 (490)
22 2gqw_A Ferredoxin reductase; f 99.9 2.4E-23 8.2E-28 211.7 16.4 214 109-344 7-306 (408)
23 4a5l_A Thioredoxin reductase; 99.9 6.8E-24 2.3E-28 206.8 10.6 220 109-348 4-312 (314)
24 2cdu_A NADPH oxidase; flavoenz 99.9 3.9E-23 1.3E-27 212.8 15.5 223 110-344 1-315 (452)
25 4fk1_A Putative thioredoxin re 99.9 1.1E-23 3.8E-28 205.3 9.9 217 107-348 4-300 (304)
26 1nhp_A NADH peroxidase; oxidor 99.9 1.4E-22 4.8E-27 208.3 18.5 223 110-344 1-314 (447)
27 2v3a_A Rubredoxin reductase; a 99.9 6.4E-23 2.2E-27 206.7 14.0 212 109-344 4-304 (384)
28 3oc4_A Oxidoreductase, pyridin 99.9 3.8E-23 1.3E-27 212.9 12.3 221 110-344 3-312 (452)
29 1q1r_A Putidaredoxin reductase 99.9 1.3E-22 4.5E-27 207.7 12.9 219 109-344 4-317 (431)
30 3fbs_A Oxidoreductase; structu 99.9 2.3E-22 8E-27 193.8 12.8 213 109-348 2-292 (297)
31 1m6i_A Programmed cell death p 99.9 3.5E-22 1.2E-26 208.0 12.7 223 107-344 9-350 (493)
32 3f8d_A Thioredoxin reductase ( 99.9 1.4E-21 4.7E-26 190.5 11.7 219 109-348 15-317 (323)
33 1zk7_A HGII, reductase, mercur 99.8 9.7E-21 3.3E-25 195.6 13.4 120 109-238 4-159 (467)
34 3lzw_A Ferredoxin--NADP reduct 99.8 5.5E-21 1.9E-25 187.1 10.5 222 109-348 7-315 (332)
35 3itj_A Thioredoxin reductase 1 99.8 6E-21 2.1E-25 187.3 10.5 121 106-238 19-151 (338)
36 3l8k_A Dihydrolipoyl dehydroge 99.8 5.2E-21 1.8E-25 197.7 10.1 121 109-238 4-153 (466)
37 1mo9_A ORF3; nucleotide bindin 99.8 2.7E-21 9.1E-26 202.8 7.0 119 106-238 40-195 (523)
38 3cty_A Thioredoxin reductase; 99.8 2.2E-20 7.5E-25 182.7 11.9 118 109-238 16-135 (319)
39 2zbw_A Thioredoxin reductase; 99.8 2.8E-20 9.5E-25 183.0 12.6 223 109-348 5-317 (335)
40 1zmd_A Dihydrolipoyl dehydroge 99.8 7.1E-21 2.4E-25 197.0 8.1 120 109-238 6-161 (474)
41 3qfa_A Thioredoxin reductase 1 99.8 9.2E-21 3.1E-25 198.5 9.0 121 109-239 32-195 (519)
42 2q7v_A Thioredoxin reductase; 99.8 3.5E-20 1.2E-24 181.8 12.3 116 109-238 8-132 (325)
43 3r9u_A Thioredoxin reductase; 99.8 2.4E-20 8.3E-25 181.2 10.1 117 109-238 4-127 (315)
44 2wpf_A Trypanothione reductase 99.8 6.6E-21 2.3E-25 198.5 6.5 44 291-344 310-353 (495)
45 3urh_A Dihydrolipoyl dehydroge 99.8 9.9E-21 3.4E-25 196.9 6.8 44 291-344 318-361 (491)
46 3dgz_A Thioredoxin reductase 2 99.8 1.4E-20 4.7E-25 195.7 7.6 45 291-344 306-350 (488)
47 1ges_A Glutathione reductase; 99.8 2.1E-20 7.3E-25 192.3 8.9 113 109-237 4-151 (450)
48 1ebd_A E3BD, dihydrolipoamide 99.8 1.3E-20 4.5E-25 194.1 7.0 119 109-239 3-155 (455)
49 2qae_A Lipoamide, dihydrolipoy 99.8 2.4E-20 8.3E-25 192.7 8.6 121 109-238 2-157 (468)
50 2ywl_A Thioredoxin reductase r 99.8 7.1E-20 2.4E-24 164.4 10.6 166 110-348 2-171 (180)
51 2a8x_A Dihydrolipoyl dehydroge 99.8 8.5E-21 2.9E-25 195.9 4.6 44 291-344 289-332 (464)
52 1dxl_A Dihydrolipoamide dehydr 99.8 1.7E-20 5.9E-25 193.8 6.4 120 109-238 6-160 (470)
53 2q0l_A TRXR, thioredoxin reduc 99.8 1.2E-19 4.2E-24 176.5 11.8 117 110-238 2-123 (311)
54 1fec_A Trypanothione reductase 99.8 4.8E-20 1.6E-24 191.7 9.0 44 291-344 306-349 (490)
55 1xdi_A RV3303C-LPDA; reductase 99.8 2.3E-20 8E-25 194.4 6.5 121 110-238 3-165 (499)
56 3dgh_A TRXR-1, thioredoxin red 99.8 6.6E-20 2.3E-24 190.2 9.8 45 291-344 306-350 (483)
57 2hqm_A GR, grase, glutathione 99.8 8.9E-20 3E-24 189.1 10.7 44 291-344 302-345 (479)
58 4b1b_A TRXR, thioredoxin reduc 99.8 5.2E-19 1.8E-23 185.5 15.7 190 65-344 192-382 (542)
59 3ab1_A Ferredoxin--NADP reduct 99.8 2.2E-19 7.4E-24 178.7 12.0 224 108-348 13-328 (360)
60 3dk9_A Grase, GR, glutathione 99.8 3.8E-20 1.3E-24 191.8 6.4 117 108-238 19-172 (478)
61 1ojt_A Surface protein; redox- 99.8 8.5E-20 2.9E-24 189.4 9.0 44 291-344 304-347 (482)
62 2r9z_A Glutathione amide reduc 99.8 1.2E-19 4.1E-24 187.4 9.3 113 109-237 4-150 (463)
63 2x8g_A Thioredoxin glutathione 99.8 2E-20 6.9E-25 199.2 2.6 168 38-238 59-270 (598)
64 1fl2_A Alkyl hydroperoxide red 99.8 6.3E-19 2.2E-23 171.3 12.6 117 110-238 2-124 (310)
65 4a9w_A Monooxygenase; baeyer-v 99.8 1.2E-19 3.9E-24 179.1 7.2 120 109-238 3-143 (357)
66 2a87_A TRXR, TR, thioredoxin r 99.8 2.7E-19 9.4E-24 176.3 9.2 116 107-238 12-135 (335)
67 1trb_A Thioredoxin reductase; 99.8 3E-19 1E-23 174.3 8.6 118 109-238 5-125 (320)
68 1o94_A Tmadh, trimethylamine d 99.8 6E-20 2.1E-24 199.7 2.9 84 55-145 341-425 (729)
69 1vdc_A NTR, NADPH dependent th 99.8 3.2E-19 1.1E-23 175.2 7.8 120 109-239 8-134 (333)
70 3o0h_A Glutathione reductase; 99.8 2.7E-19 9.4E-24 185.7 7.5 116 109-238 26-176 (484)
71 1hyu_A AHPF, alkyl hydroperoxi 99.7 6.5E-18 2.2E-22 176.9 10.0 217 109-348 212-516 (521)
72 2eq6_A Pyruvate dehydrogenase 99.7 1.3E-16 4.3E-21 164.7 15.4 163 109-344 169-332 (464)
73 1v59_A Dihydrolipoamide dehydr 99.7 1.9E-16 6.6E-21 163.8 16.7 162 109-345 183-349 (478)
74 3ic9_A Dihydrolipoamide dehydr 99.7 1.2E-16 4.2E-21 166.1 14.6 162 109-345 174-337 (492)
75 1lvl_A Dihydrolipoamide dehydr 99.7 1.6E-16 5.4E-21 163.8 13.4 157 109-344 171-328 (458)
76 3k30_A Histamine dehydrogenase 99.7 1.1E-17 3.8E-22 180.9 4.5 110 106-238 388-505 (690)
77 3lad_A Dihydrolipoamide dehydr 99.7 3E-16 1E-20 162.3 14.7 161 109-344 180-341 (476)
78 1onf_A GR, grase, glutathione 99.7 7.6E-16 2.6E-20 160.4 17.6 164 109-344 176-369 (500)
79 2yqu_A 2-oxoglutarate dehydrog 99.7 3.2E-16 1.1E-20 161.2 14.3 159 109-345 167-326 (455)
80 1y56_A Hypothetical protein PH 99.7 1.4E-17 4.7E-22 173.3 3.8 212 109-347 108-376 (493)
81 3d1c_A Flavin-containing putat 99.7 5.3E-17 1.8E-21 161.5 7.9 116 109-236 4-149 (369)
82 2gag_A Heterotetrameric sarcos 99.6 1.7E-16 6E-21 177.2 9.9 131 109-243 128-268 (965)
83 4dna_A Probable glutathione re 99.6 3E-15 1E-19 154.4 16.6 157 109-344 170-329 (463)
84 2xve_A Flavin-containing monoo 99.6 3.5E-16 1.2E-20 161.5 8.3 36 110-145 3-44 (464)
85 1ps9_A 2,4-dienoyl-COA reducta 99.6 1.2E-16 4.1E-21 172.3 4.8 105 107-238 371-476 (671)
86 2bry_A NEDD9 interacting prote 99.6 4.5E-17 1.5E-21 169.6 -0.3 112 31-145 8-128 (497)
87 2cul_A Glucose-inhibited divis 99.6 5.3E-15 1.8E-19 138.4 13.1 213 109-347 3-231 (232)
88 1cjc_A Protein (adrenodoxin re 99.6 1.2E-16 4.3E-21 164.6 0.6 108 109-238 6-116 (460)
89 1lqt_A FPRA; NADP+ derivative, 99.6 2.7E-15 9.1E-20 154.5 9.7 108 109-238 3-118 (456)
90 2gv8_A Monooxygenase; FMO, FAD 99.6 5E-15 1.7E-19 151.9 9.2 37 108-144 5-43 (447)
91 3s5w_A L-ornithine 5-monooxyge 99.5 4.5E-14 1.5E-18 145.2 10.3 53 291-347 392-448 (463)
92 3fpz_A Thiazole biosynthetic e 99.5 1.3E-16 4.4E-21 157.0 -8.5 93 38-145 9-103 (326)
93 1rp0_A ARA6, thiazole biosynth 99.2 1.1E-10 3.7E-15 112.3 10.7 203 109-348 39-275 (284)
94 2gqf_A Hypothetical protein HI 99.1 3.3E-11 1.1E-15 121.8 3.8 50 291-344 346-399 (401)
95 2eq6_A Pyruvate dehydrogenase 99.1 2.9E-11 9.8E-16 124.6 2.6 153 109-283 6-198 (464)
96 1d4d_A Flavocytochrome C fumar 99.1 3.2E-10 1.1E-14 119.8 10.5 102 34-144 43-161 (572)
97 1onf_A GR, grase, glutathione 99.0 2.6E-11 8.9E-16 126.1 0.5 166 109-283 2-205 (500)
98 3nlc_A Uncharacterized protein 99.0 3.2E-09 1.1E-13 111.2 15.1 47 293-348 497-543 (549)
99 2e5v_A L-aspartate oxidase; ar 99.0 1.7E-09 5.8E-14 111.6 12.4 31 111-141 1-31 (472)
100 1lvl_A Dihydrolipoamide dehydr 99.0 8.8E-11 3E-15 120.7 1.5 145 109-275 5-187 (458)
101 4ap3_A Steroid monooxygenase; 99.0 3E-10 1E-14 119.4 4.8 120 109-238 21-170 (549)
102 1v59_A Dihydrolipoamide dehydr 99.0 9.5E-11 3.2E-15 121.0 0.9 161 109-283 5-212 (478)
103 3uox_A Otemo; baeyer-villiger 98.9 4.7E-10 1.6E-14 117.8 5.5 120 109-238 9-158 (545)
104 3ces_A MNMG, tRNA uridine 5-ca 98.9 6.5E-09 2.2E-13 110.1 13.7 121 109-238 28-190 (651)
105 3oz2_A Digeranylgeranylglycero 98.9 1.4E-09 4.9E-14 108.0 6.8 36 109-144 4-39 (397)
106 3gwf_A Cyclohexanone monooxyge 98.9 1.9E-09 6.6E-14 113.0 7.5 121 109-238 8-158 (540)
107 4b1b_A TRXR, thioredoxin reduc 98.9 1.6E-10 5.4E-15 121.1 -1.6 166 110-289 43-264 (542)
108 3lad_A Dihydrolipoamide dehydr 98.8 1.7E-09 5.8E-14 111.5 2.6 34 109-142 3-36 (476)
109 4dna_A Probable glutathione re 98.8 1.9E-09 6.5E-14 110.8 2.9 117 109-238 5-155 (463)
110 2yqu_A 2-oxoglutarate dehydrog 98.8 1.7E-09 5.8E-14 110.9 2.4 148 110-275 2-183 (455)
111 1w4x_A Phenylacetone monooxyge 98.7 1.2E-08 4E-13 107.1 7.6 37 109-145 16-52 (542)
112 3v76_A Flavoprotein; structura 98.6 3.2E-08 1.1E-12 100.4 5.4 37 108-144 26-62 (417)
113 3urh_A Dihydrolipoyl dehydroge 98.5 2.1E-07 7.1E-12 96.3 9.6 106 109-233 198-304 (491)
114 3alj_A 2-methyl-3-hydroxypyrid 98.5 9.7E-08 3.3E-12 95.1 6.8 37 108-144 10-46 (379)
115 3ic9_A Dihydrolipoamide dehydr 98.5 3.2E-08 1.1E-12 102.5 3.4 33 110-142 9-41 (492)
116 2v3a_A Rubredoxin reductase; a 98.5 2.3E-07 7.7E-12 92.8 9.3 100 109-231 145-245 (384)
117 3gwf_A Cyclohexanone monooxyge 98.5 6.3E-07 2.2E-11 93.8 13.1 37 108-144 177-213 (540)
118 1ebd_A E3BD, dihydrolipoamide 98.5 2.1E-07 7.2E-12 95.2 8.9 161 109-344 170-331 (455)
119 4eqs_A Coenzyme A disulfide re 98.5 1.8E-07 6.1E-12 95.4 7.8 96 109-232 147-243 (437)
120 1kf6_A Fumarate reductase flav 98.5 5.6E-06 1.9E-10 87.8 19.1 56 291-348 360-416 (602)
121 1nhp_A NADH peroxidase; oxidor 98.5 2.6E-07 8.9E-12 94.3 8.5 102 109-234 149-251 (447)
122 2zxi_A TRNA uridine 5-carboxym 98.5 2.6E-07 9E-12 97.5 8.6 120 109-237 27-188 (637)
123 2a8x_A Dihydrolipoyl dehydroge 98.4 2.3E-07 7.8E-12 95.2 7.2 104 109-233 171-275 (464)
124 2gqw_A Ferredoxin reductase; f 98.4 3.2E-07 1.1E-11 92.6 8.2 96 109-231 145-241 (408)
125 1ojt_A Surface protein; redox- 98.4 1.7E-07 5.9E-12 96.6 6.2 104 109-232 185-289 (482)
126 1zmd_A Dihydrolipoyl dehydroge 98.4 3E-07 1E-11 94.6 7.8 164 109-344 178-343 (474)
127 2r9z_A Glutathione amide reduc 98.4 3.1E-07 1.1E-11 94.3 7.8 159 109-344 166-325 (463)
128 3oc4_A Oxidoreductase, pyridin 98.4 6.6E-07 2.2E-11 91.5 10.0 102 109-234 147-249 (452)
129 3cp8_A TRNA uridine 5-carboxym 98.4 2.9E-07 9.8E-12 97.5 7.3 115 109-232 21-177 (641)
130 1xdi_A RV3303C-LPDA; reductase 98.4 3.3E-07 1.1E-11 94.9 7.7 156 109-344 182-340 (499)
131 3dk9_A Grase, GR, glutathione 98.4 5.6E-07 1.9E-11 92.6 9.3 164 109-345 187-355 (478)
132 2wpf_A Trypanothione reductase 98.4 3.7E-07 1.3E-11 94.6 7.8 100 109-232 191-295 (495)
133 1fec_A Trypanothione reductase 98.4 4.1E-07 1.4E-11 94.1 8.0 100 109-232 187-291 (490)
134 1ges_A Glutathione reductase; 98.4 3.2E-07 1.1E-11 93.8 7.1 158 109-344 167-326 (450)
135 3kkj_A Amine oxidase, flavin-c 98.4 2E-07 6.9E-12 85.8 4.9 36 110-145 3-38 (336)
136 2qae_A Lipoamide, dihydrolipoy 98.4 4E-07 1.4E-11 93.5 7.6 164 109-344 174-338 (468)
137 1dxl_A Dihydrolipoamide dehydr 98.4 2.5E-07 8.6E-12 94.9 5.9 159 109-344 177-340 (470)
138 2bc0_A NADH oxidase; flavoprot 98.4 6.6E-07 2.2E-11 92.5 9.1 100 109-232 194-294 (490)
139 2xdo_A TETX2 protein; tetracyc 98.4 7.9E-07 2.7E-11 89.1 8.8 38 107-144 24-61 (398)
140 2q7v_A Thioredoxin reductase; 98.4 2.2E-06 7.4E-11 83.1 11.6 158 109-348 152-312 (325)
141 2cdu_A NADPH oxidase; flavoenz 98.4 6.8E-07 2.3E-11 91.3 8.3 101 109-232 149-250 (452)
142 3rp8_A Flavoprotein monooxygen 98.3 9.9E-07 3.4E-11 88.6 9.3 39 106-144 20-58 (407)
143 2z3y_A Lysine-specific histone 98.3 2.2E-07 7.7E-12 99.7 4.6 93 45-144 49-142 (662)
144 2hqm_A GR, grase, glutathione 98.3 4.2E-07 1.4E-11 93.7 6.3 100 109-231 185-287 (479)
145 3qfa_A Thioredoxin reductase 1 98.3 9.2E-07 3.2E-11 92.1 9.0 164 109-344 210-378 (519)
146 1zk7_A HGII, reductase, mercur 98.3 4.9E-07 1.7E-11 92.8 6.6 156 109-344 176-332 (467)
147 1fl2_A Alkyl hydroperoxide red 98.3 2.1E-06 7.3E-11 82.4 10.8 158 109-348 144-305 (310)
148 2xag_A Lysine-specific histone 98.3 2.6E-07 8.8E-12 101.4 4.8 93 45-144 220-313 (852)
149 3ef6_A Toluene 1,2-dioxygenase 98.3 5.5E-07 1.9E-11 90.9 6.9 98 109-231 143-243 (410)
150 1xhc_A NADH oxidase /nitrite r 98.3 3.4E-07 1.2E-11 91.1 5.2 93 109-231 143-236 (367)
151 3l8k_A Dihydrolipoyl dehydroge 98.3 7.7E-07 2.6E-11 91.3 8.0 159 109-345 172-332 (466)
152 1vdc_A NTR, NADPH dependent th 98.3 2.7E-06 9.3E-11 82.6 11.5 158 109-348 159-323 (333)
153 3dgh_A TRXR-1, thioredoxin red 98.3 9.3E-07 3.2E-11 91.1 8.6 102 109-232 187-292 (483)
154 2a87_A TRXR, TR, thioredoxin r 98.3 2.7E-06 9.2E-11 83.0 11.4 158 109-348 155-316 (335)
155 3lxd_A FAD-dependent pyridine 98.3 1.2E-06 4E-11 88.5 9.1 100 109-231 152-253 (415)
156 3ics_A Coenzyme A-disulfide re 98.3 5.7E-07 1.9E-11 95.1 6.8 97 109-231 187-284 (588)
157 1w4x_A Phenylacetone monooxyge 98.3 2.8E-06 9.6E-11 88.9 12.0 37 108-144 185-221 (542)
158 1yvv_A Amine oxidase, flavin-c 98.3 1.3E-06 4.6E-11 84.8 8.9 36 109-144 2-37 (336)
159 3o0h_A Glutathione reductase; 98.3 8.6E-07 2.9E-11 91.4 7.9 158 109-344 191-349 (484)
160 3itj_A Thioredoxin reductase 1 98.3 2.8E-06 9.5E-11 82.4 11.0 158 109-348 173-335 (338)
161 2vou_A 2,6-dihydroxypyridine h 98.3 6.7E-07 2.3E-11 89.6 6.7 36 109-144 5-40 (397)
162 3ntd_A FAD-dependent pyridine 98.3 1.1E-06 3.8E-11 92.2 8.7 99 109-231 151-269 (565)
163 2q0l_A TRXR, thioredoxin reduc 98.3 2.4E-06 8.1E-11 82.1 10.2 163 109-348 143-309 (311)
164 4a5l_A Thioredoxin reductase; 98.3 9.4E-07 3.2E-11 85.1 7.1 100 109-234 152-255 (314)
165 2zbw_A Thioredoxin reductase; 98.3 1.7E-06 5.9E-11 84.0 9.0 101 109-232 152-255 (335)
166 3cgb_A Pyridine nucleotide-dis 98.3 7.5E-07 2.6E-11 91.8 6.7 99 109-232 186-285 (480)
167 1trb_A Thioredoxin reductase; 98.3 2.1E-06 7.2E-11 82.8 9.5 161 109-348 145-314 (320)
168 2x3n_A Probable FAD-dependent 98.3 9.5E-07 3.3E-11 88.4 7.3 36 109-144 6-41 (399)
169 3dgz_A Thioredoxin reductase 2 98.3 1.4E-06 4.9E-11 89.9 8.6 103 109-233 185-291 (488)
170 3qj4_A Renalase; FAD/NAD(P)-bi 98.3 8.9E-07 3.1E-11 86.7 6.5 35 110-144 2-39 (342)
171 3iwa_A FAD-dependent pyridine 98.3 1.1E-06 3.8E-11 90.2 7.5 100 109-231 159-260 (472)
172 3kd9_A Coenzyme A disulfide re 98.2 1.7E-06 5.6E-11 88.4 8.4 98 109-231 148-246 (449)
173 3fg2_P Putative rubredoxin red 98.2 1.7E-06 5.9E-11 87.0 8.1 100 109-231 142-243 (404)
174 2i0z_A NAD(FAD)-utilizing dehy 98.2 2.3E-06 8E-11 87.3 9.0 36 109-144 26-61 (447)
175 1q1r_A Putidaredoxin reductase 98.2 1.7E-06 5.6E-11 88.0 7.6 100 109-231 149-252 (431)
176 3nix_A Flavoprotein/dehydrogen 98.2 8.2E-07 2.8E-11 89.3 5.1 34 109-142 5-38 (421)
177 3ab1_A Ferredoxin--NADP reduct 98.2 3.7E-06 1.3E-10 82.8 9.5 100 109-232 163-266 (360)
178 1mo9_A ORF3; nucleotide bindin 98.2 1.7E-06 5.9E-11 90.1 7.4 185 110-382 215-404 (523)
179 2gv8_A Monooxygenase; FMO, FAD 98.2 6.8E-06 2.3E-10 83.7 11.0 140 109-345 212-359 (447)
180 3s5w_A L-ornithine 5-monooxyge 98.2 2.3E-06 7.8E-11 87.4 7.4 36 109-144 227-264 (463)
181 3i3l_A Alkylhalidase CMLS; fla 98.2 2E-06 7E-11 90.9 7.0 37 107-143 21-57 (591)
182 1ryi_A Glycine oxidase; flavop 98.1 8.5E-07 2.9E-11 87.9 3.6 34 109-142 17-50 (382)
183 3cty_A Thioredoxin reductase; 98.1 6.3E-06 2.2E-10 79.6 9.7 158 109-348 155-316 (319)
184 3fbs_A Oxidoreductase; structu 98.1 2.3E-06 8E-11 81.3 6.4 89 109-232 141-229 (297)
185 3f8d_A Thioredoxin reductase ( 98.1 1.1E-05 3.7E-10 77.5 11.0 97 109-231 154-253 (323)
186 3uox_A Otemo; baeyer-villiger 98.1 3.3E-05 1.1E-09 80.8 15.4 37 108-144 184-220 (545)
187 1m6i_A Programmed cell death p 98.1 3.5E-06 1.2E-10 87.1 7.9 101 109-232 180-285 (493)
188 4dgk_A Phytoene dehydrogenase; 98.1 1.4E-06 4.8E-11 89.8 4.0 37 109-145 1-37 (501)
189 3fmw_A Oxygenase; mithramycin, 98.1 5E-06 1.7E-10 87.6 8.0 36 109-144 49-84 (570)
190 3ps9_A TRNA 5-methylaminomethy 98.1 4.7E-06 1.6E-10 89.6 7.9 36 109-144 272-307 (676)
191 3r9u_A Thioredoxin reductase; 98.1 7.4E-06 2.5E-10 78.5 8.4 161 109-348 147-312 (315)
192 3atr_A Conserved archaeal prot 98.1 2.1E-06 7E-11 87.7 4.7 35 109-143 6-40 (453)
193 1y56_B Sarcosine oxidase; dehy 98.1 3.5E-06 1.2E-10 83.5 6.2 34 109-142 5-38 (382)
194 3d1c_A Flavin-containing putat 98.1 1E-05 3.4E-10 79.6 9.1 170 109-348 166-339 (369)
195 1k0i_A P-hydroxybenzoate hydro 98.0 3.8E-06 1.3E-10 83.7 5.9 34 110-143 3-36 (394)
196 3ihg_A RDME; flavoenzyme, anth 98.0 4.8E-06 1.6E-10 86.9 6.7 36 109-144 5-40 (535)
197 1hyu_A AHPF, alkyl hydroperoxi 98.0 1.4E-05 4.6E-10 83.3 10.0 98 109-232 355-456 (521)
198 2xve_A Flavin-containing monoo 98.0 9.2E-06 3.2E-10 83.3 8.5 139 108-344 196-337 (464)
199 4gcm_A TRXR, thioredoxin reduc 98.0 2E-05 6.8E-10 75.9 10.3 37 109-145 145-181 (312)
200 3e1t_A Halogenase; flavoprotei 98.0 7.5E-06 2.6E-10 85.0 7.7 34 109-142 7-40 (512)
201 4b63_A L-ornithine N5 monooxyg 98.0 3.6E-05 1.2E-09 79.7 12.4 41 108-148 38-92 (501)
202 2qa1_A PGAE, polyketide oxygen 98.0 1.4E-05 4.7E-10 82.9 9.1 36 109-144 11-46 (500)
203 3lzw_A Ferredoxin--NADP reduct 98.0 2.4E-05 8.3E-10 75.4 10.1 97 109-232 154-253 (332)
204 2x8g_A Thioredoxin glutathione 98.0 1.5E-05 5E-10 84.4 9.1 163 109-345 286-458 (598)
205 3klj_A NAD(FAD)-dependent dehy 98.0 1.5E-06 5.2E-11 87.0 1.2 88 109-232 146-234 (385)
206 2gag_B Heterotetrameric sarcos 98.0 5.8E-06 2E-10 82.4 5.4 34 109-142 21-56 (405)
207 1y0p_A Fumarate reductase flav 98.0 1.1E-05 3.9E-10 84.8 7.8 36 109-144 126-161 (571)
208 2qa2_A CABE, polyketide oxygen 97.9 1.8E-05 6.3E-10 81.9 9.1 36 109-144 12-47 (499)
209 3jsk_A Cypbp37 protein; octame 97.9 3.4E-05 1.2E-09 75.7 10.1 37 109-145 79-117 (344)
210 4g6h_A Rotenone-insensitive NA 97.9 8.5E-06 2.9E-10 84.5 6.1 101 110-230 218-333 (502)
211 2gjc_A Thiazole biosynthetic e 97.9 3.7E-06 1.3E-10 82.0 2.8 67 76-145 16-103 (326)
212 4ap3_A Steroid monooxygenase; 97.9 0.00013 4.3E-09 76.4 14.7 37 108-144 190-226 (549)
213 3k30_A Histamine dehydrogenase 97.8 2.3E-05 7.9E-10 84.4 8.0 150 109-348 523-675 (690)
214 1qo8_A Flavocytochrome C3 fuma 97.8 1.5E-05 5.3E-10 83.7 6.2 36 109-144 121-156 (566)
215 4hb9_A Similarities with proba 97.8 1.2E-05 4E-10 80.0 4.7 34 111-144 3-36 (412)
216 4a9w_A Monooxygenase; baeyer-v 97.8 2.1E-05 7.2E-10 76.5 5.8 167 109-348 163-352 (357)
217 4gde_A UDP-galactopyranose mut 97.8 1.2E-05 4E-10 82.9 3.9 37 109-145 10-47 (513)
218 2b9w_A Putative aminooxidase; 97.7 2.2E-05 7.7E-10 78.9 5.4 37 109-145 6-43 (424)
219 3nks_A Protoporphyrinogen oxid 97.7 2.1E-05 7.3E-10 80.3 5.2 37 109-145 2-40 (477)
220 2e1m_A L-glutamate oxidase; L- 97.7 2.6E-05 8.8E-10 77.7 5.6 38 108-145 43-81 (376)
221 1s3e_A Amine oxidase [flavin-c 97.7 2E-05 6.8E-10 81.7 4.7 36 109-144 4-39 (520)
222 3nrn_A Uncharacterized protein 97.7 2.4E-05 8.1E-10 78.8 4.9 35 110-144 1-35 (421)
223 3ihm_A Styrene monooxygenase A 97.7 2E-05 6.7E-10 79.9 4.2 34 109-142 22-55 (430)
224 4gut_A Lysine-specific histone 97.7 7.1E-06 2.4E-10 89.3 0.8 97 47-145 273-372 (776)
225 1ps9_A 2,4-dienoyl-COA reducta 97.7 7.4E-05 2.5E-09 80.1 8.7 29 109-137 494-522 (671)
226 3dme_A Conserved exported prot 97.7 2.5E-05 8.6E-10 76.4 4.5 35 109-143 4-38 (369)
227 3ka7_A Oxidoreductase; structu 97.7 2.7E-05 9.4E-10 78.2 4.8 35 110-144 1-35 (425)
228 1rsg_A FMS1 protein; FAD bindi 97.7 1.8E-05 6.1E-10 82.1 3.5 37 109-145 8-45 (516)
229 1o94_A Tmadh, trimethylamine d 97.7 0.00011 3.9E-09 79.5 9.8 158 109-348 528-700 (729)
230 2jae_A L-amino acid oxidase; o 97.7 3.6E-05 1.2E-09 79.0 5.6 37 109-145 11-47 (489)
231 3i6d_A Protoporphyrinogen oxid 97.6 1.6E-05 5.5E-10 80.7 2.7 37 109-145 5-47 (470)
232 3k7m_X 6-hydroxy-L-nicotine ox 97.6 2.7E-05 9.2E-10 78.4 4.3 36 110-145 2-37 (431)
233 2bcg_G Secretory pathway GDP d 97.6 3.8E-05 1.3E-09 78.4 5.2 37 109-145 11-47 (453)
234 3c96_A Flavin-containing monoo 97.6 3.7E-05 1.3E-09 77.1 4.7 36 109-144 4-40 (410)
235 2iid_A L-amino-acid oxidase; f 97.6 4.8E-05 1.6E-09 78.3 4.9 37 109-145 33-69 (498)
236 3nyc_A D-arginine dehydrogenas 97.5 3.6E-05 1.2E-09 75.8 3.7 35 109-144 9-43 (381)
237 3cgv_A Geranylgeranyl reductas 97.5 3E-05 1E-09 76.9 3.1 36 109-144 4-39 (397)
238 2ivd_A PPO, PPOX, protoporphyr 97.5 5.2E-05 1.8E-09 77.5 4.9 37 109-145 16-52 (478)
239 2vdc_G Glutamate synthase [NAD 97.5 3.9E-05 1.3E-09 78.5 4.0 168 108-348 263-444 (456)
240 2yg5_A Putrescine oxidase; oxi 97.5 3.3E-05 1.1E-09 78.4 3.3 37 109-145 5-41 (453)
241 1sez_A Protoporphyrinogen oxid 97.5 6E-05 2.1E-09 77.6 5.2 37 109-145 13-49 (504)
242 2vvm_A Monoamine oxidase N; FA 97.5 4.9E-05 1.7E-09 78.1 4.6 35 110-144 40-74 (495)
243 1v0j_A UDP-galactopyranose mut 97.5 5.5E-05 1.9E-09 75.9 4.6 37 109-145 7-44 (399)
244 1c0p_A D-amino acid oxidase; a 97.5 7.3E-05 2.5E-09 73.5 5.3 35 108-142 5-39 (363)
245 2bi7_A UDP-galactopyranose mut 97.5 8.3E-05 2.8E-09 74.2 5.4 37 109-145 3-39 (384)
246 3dje_A Fructosyl amine: oxygen 97.5 7.6E-05 2.6E-09 75.4 5.1 35 109-143 6-41 (438)
247 3lov_A Protoporphyrinogen oxid 97.5 6.9E-05 2.4E-09 76.5 4.6 36 109-144 4-41 (475)
248 3c4a_A Probable tryptophan hyd 97.5 6.3E-05 2.2E-09 74.7 4.1 35 110-144 1-37 (381)
249 2oln_A NIKD protein; flavoprot 97.5 5.6E-05 1.9E-09 75.2 3.7 34 110-143 5-38 (397)
250 3hdq_A UDP-galactopyranose mut 97.4 8.9E-05 3E-09 74.4 4.9 37 109-145 29-65 (397)
251 2gag_A Heterotetrameric sarcos 97.4 0.00017 5.8E-09 80.5 7.1 151 109-348 284-444 (965)
252 2e4g_A Tryptophan halogenase; 97.4 0.00011 3.9E-09 76.8 5.3 34 109-142 25-61 (550)
253 2gf3_A MSOX, monomeric sarcosi 97.4 9.5E-05 3.3E-09 73.1 4.4 35 109-143 3-37 (389)
254 2uzz_A N-methyl-L-tryptophan o 97.3 8.2E-05 2.8E-09 73.2 3.2 34 110-143 3-36 (372)
255 3pvc_A TRNA 5-methylaminomethy 97.3 0.00017 5.9E-09 77.5 5.9 36 109-144 264-299 (689)
256 4dsg_A UDP-galactopyranose mut 97.3 0.00015 5.1E-09 74.7 5.0 37 109-145 9-46 (484)
257 1i8t_A UDP-galactopyranose mut 97.3 0.00014 4.6E-09 72.2 4.5 36 110-145 2-37 (367)
258 1gte_A Dihydropyrimidine dehyd 97.3 0.00028 9.4E-09 79.3 7.2 167 109-348 332-508 (1025)
259 1lqt_A FPRA; NADP+ derivative, 97.3 0.00083 2.8E-08 68.5 10.1 181 108-348 146-387 (456)
260 3g5s_A Methylenetetrahydrofola 97.3 0.00016 5.6E-09 71.9 4.6 33 110-142 2-34 (443)
261 2aqj_A Tryptophan halogenase, 97.3 0.00016 5.6E-09 75.3 4.8 34 109-142 5-41 (538)
262 2r0c_A REBC; flavin adenine di 97.3 0.00013 4.4E-09 76.4 3.9 35 110-144 27-61 (549)
263 1cjc_A Protein (adrenodoxin re 97.2 0.00065 2.2E-08 69.4 8.6 49 291-348 346-395 (460)
264 2weu_A Tryptophan 5-halogenase 97.2 0.00014 4.8E-09 75.1 3.5 34 109-142 2-38 (511)
265 2pyx_A Tryptophan halogenase; 97.2 0.0002 7E-09 74.4 4.4 35 109-143 7-53 (526)
266 1d5t_A Guanine nucleotide diss 97.2 0.00029 1E-08 71.3 5.2 37 109-145 6-42 (433)
267 3g3e_A D-amino-acid oxidase; F 97.2 0.00017 5.7E-09 70.6 3.2 32 111-142 2-39 (351)
268 2dkh_A 3-hydroxybenzoate hydro 97.1 0.00029 9.9E-09 75.1 4.8 36 109-144 32-68 (639)
269 2qcu_A Aerobic glycerol-3-phos 97.1 0.00027 9.1E-09 73.1 4.3 34 109-142 3-36 (501)
270 3axb_A Putative oxidoreductase 97.1 0.00017 5.7E-09 73.1 2.7 33 109-141 23-56 (448)
271 2gmh_A Electron transfer flavo 97.1 0.0002 7E-09 75.4 3.4 36 109-144 35-76 (584)
272 3c4n_A Uncharacterized protein 97.1 0.00022 7.6E-09 71.4 3.2 33 110-142 37-71 (405)
273 4at0_A 3-ketosteroid-delta4-5a 97.1 0.00036 1.2E-08 72.3 4.6 36 109-144 41-76 (510)
274 3p1w_A Rabgdi protein; GDI RAB 97.0 0.00045 1.5E-08 70.8 4.3 38 108-145 19-56 (475)
275 1b37_A Protein (polyamine oxid 96.9 0.00055 1.9E-08 69.9 4.7 36 109-144 4-40 (472)
276 3pl8_A Pyranose 2-oxidase; sub 96.9 0.00051 1.8E-08 72.9 4.5 37 109-145 46-82 (623)
277 3da1_A Glycerol-3-phosphate de 96.9 0.00059 2E-08 71.6 4.6 34 109-142 18-51 (561)
278 1pj5_A N,N-dimethylglycine oxi 96.9 0.00064 2.2E-08 74.7 4.6 35 109-143 4-39 (830)
279 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00038 1.3E-08 74.7 2.7 36 109-144 56-100 (721)
280 1pn0_A Phenol 2-monooxygenase; 96.8 0.00073 2.5E-08 72.3 4.5 35 110-144 9-48 (665)
281 2rgh_A Alpha-glycerophosphate 96.8 0.00077 2.6E-08 70.8 4.4 34 109-142 32-65 (571)
282 2wdq_A Succinate dehydrogenase 96.7 0.00081 2.8E-08 70.9 4.3 34 110-143 8-41 (588)
283 1chu_A Protein (L-aspartate ox 96.7 0.00099 3.4E-08 69.5 4.7 55 291-347 355-410 (540)
284 3sx6_A Sulfide-quinone reducta 96.7 0.0016 5.4E-08 65.9 5.9 105 110-230 150-270 (437)
285 2h88_A Succinate dehydrogenase 96.7 0.001 3.4E-08 70.6 4.3 33 110-142 19-51 (621)
286 2bs2_A Quinol-fumarate reducta 96.6 0.0012 4.2E-08 70.4 4.5 56 291-348 373-429 (660)
287 4fk1_A Putative thioredoxin re 96.5 0.0027 9.2E-08 60.6 5.8 88 109-230 146-237 (304)
288 3h28_A Sulfide-quinone reducta 96.5 0.0016 5.6E-08 65.6 4.4 100 110-230 143-257 (430)
289 1jnr_A Adenylylsulfate reducta 96.5 0.0018 6.1E-08 69.0 4.5 33 110-142 23-59 (643)
290 2g1u_A Hypothetical protein TM 96.4 0.0027 9.1E-08 54.5 4.8 34 109-142 19-52 (155)
291 3h8l_A NADH oxidase; membrane 96.4 0.002 7E-08 64.3 4.2 82 120-230 181-271 (409)
292 1kdg_A CDH, cellobiose dehydro 96.4 0.002 6.7E-08 67.2 4.2 35 109-143 7-41 (546)
293 3fwz_A Inner membrane protein 96.4 0.0038 1.3E-07 52.6 5.2 34 109-142 7-40 (140)
294 3llv_A Exopolyphosphatase-rela 96.3 0.0034 1.1E-07 52.8 4.5 34 109-142 6-39 (141)
295 1id1_A Putative potassium chan 96.3 0.0038 1.3E-07 53.4 4.9 34 109-142 3-36 (153)
296 3gyx_A Adenylylsulfate reducta 96.3 0.002 6.8E-08 68.8 3.6 44 297-348 446-489 (662)
297 3ic5_A Putative saccharopine d 96.0 0.005 1.7E-07 49.5 4.2 34 109-142 5-39 (118)
298 1lss_A TRK system potassium up 96.0 0.0059 2E-07 50.7 4.5 34 109-142 4-37 (140)
299 3t37_A Probable dehydrogenase; 95.8 0.0066 2.2E-07 62.6 4.6 35 109-143 17-52 (526)
300 4b63_A L-ornithine N5 monooxyg 95.6 0.012 4.1E-07 60.6 5.8 37 108-144 245-283 (501)
301 2hmt_A YUAA protein; RCK, KTN, 95.5 0.0091 3.1E-07 49.7 3.9 34 109-142 6-39 (144)
302 1ju2_A HydroxynitrIle lyase; f 95.5 0.0071 2.4E-07 62.9 3.8 34 109-143 26-59 (536)
303 1coy_A Cholesterol oxidase; ox 95.5 0.01 3.5E-07 61.2 4.7 36 109-144 11-46 (507)
304 3c85_A Putative glutathione-re 95.4 0.012 4.1E-07 51.7 4.4 34 109-142 39-73 (183)
305 3dfz_A SIRC, precorrin-2 dehyd 95.4 0.014 4.6E-07 53.6 4.8 34 108-141 30-63 (223)
306 1n4w_A CHOD, cholesterol oxida 95.3 0.011 3.7E-07 61.0 4.5 37 109-145 5-41 (504)
307 3q9t_A Choline dehydrogenase a 95.2 0.015 5.2E-07 61.0 4.9 35 109-143 6-41 (577)
308 4e12_A Diketoreductase; oxidor 95.1 0.019 6.7E-07 54.3 5.0 36 108-143 3-38 (283)
309 1kyq_A Met8P, siroheme biosynt 95.0 0.013 4.3E-07 55.5 3.2 34 109-142 13-46 (274)
310 2x5o_A UDP-N-acetylmuramoylala 94.9 0.015 5.3E-07 58.7 3.8 35 109-143 5-39 (439)
311 2jbv_A Choline oxidase; alcoho 94.7 0.023 7.9E-07 59.1 4.9 35 109-143 13-48 (546)
312 3lk7_A UDP-N-acetylmuramoylala 94.7 0.024 8.1E-07 57.6 4.6 35 108-142 8-42 (451)
313 1f0y_A HCDH, L-3-hydroxyacyl-C 94.7 0.03 1E-06 53.4 5.1 34 109-142 15-48 (302)
314 3qvp_A Glucose oxidase; oxidor 94.6 0.024 8.4E-07 59.4 4.7 34 109-142 19-53 (583)
315 1gpe_A Protein (glucose oxidas 94.6 0.024 8.3E-07 59.5 4.7 36 109-144 24-60 (587)
316 3doj_A AT3G25530, dehydrogenas 94.6 0.028 9.7E-07 53.9 4.8 37 106-142 18-54 (310)
317 3oj0_A Glutr, glutamyl-tRNA re 94.6 0.028 9.5E-07 47.3 4.2 34 109-142 21-54 (144)
318 3kkj_A Amine oxidase, flavin-c 94.5 0.036 1.2E-06 49.8 5.2 42 296-348 287-328 (336)
319 3fim_B ARYL-alcohol oxidase; A 94.3 0.02 6.8E-07 59.9 3.1 35 110-144 3-38 (566)
320 3e8x_A Putative NAD-dependent 94.2 0.035 1.2E-06 50.5 4.4 37 106-142 18-55 (236)
321 4dio_A NAD(P) transhydrogenase 94.2 0.039 1.3E-06 54.9 4.9 34 109-142 190-223 (405)
322 3gpi_A NAD-dependent epimerase 94.1 0.041 1.4E-06 51.6 4.7 35 109-143 3-37 (286)
323 1bg6_A N-(1-D-carboxylethyl)-L 94.1 0.038 1.3E-06 53.7 4.7 34 109-142 4-37 (359)
324 3l4b_C TRKA K+ channel protien 94.1 0.033 1.1E-06 50.4 3.9 32 111-142 2-33 (218)
325 3i83_A 2-dehydropantoate 2-red 94.1 0.04 1.4E-06 53.1 4.6 33 110-142 3-35 (320)
326 1pzg_A LDH, lactate dehydrogen 94.0 0.045 1.5E-06 53.2 4.8 35 109-143 9-44 (331)
327 3vtf_A UDP-glucose 6-dehydroge 94.0 0.043 1.5E-06 55.4 4.7 37 107-143 19-55 (444)
328 2ew2_A 2-dehydropantoate 2-red 93.8 0.046 1.6E-06 51.9 4.5 33 110-142 4-36 (316)
329 3p2y_A Alanine dehydrogenase/p 93.8 0.038 1.3E-06 54.6 3.9 34 109-142 184-217 (381)
330 3eag_A UDP-N-acetylmuramate:L- 93.7 0.051 1.8E-06 52.6 4.6 34 109-142 4-38 (326)
331 1lld_A L-lactate dehydrogenase 93.7 0.051 1.8E-06 52.1 4.6 34 109-142 7-42 (319)
332 3hyw_A Sulfide-quinone reducta 93.7 0.051 1.7E-06 54.6 4.7 45 177-230 212-257 (430)
333 3qha_A Putative oxidoreductase 93.7 0.049 1.7E-06 51.9 4.4 34 109-142 15-48 (296)
334 3ghy_A Ketopantoate reductase 93.7 0.05 1.7E-06 52.8 4.5 33 109-141 3-35 (335)
335 3ius_A Uncharacterized conserv 93.7 0.054 1.8E-06 50.7 4.6 34 109-142 5-38 (286)
336 2raf_A Putative dinucleotide-b 93.7 0.06 2E-06 48.5 4.7 35 109-143 19-53 (209)
337 3ado_A Lambda-crystallin; L-gu 93.7 0.041 1.4E-06 53.2 3.8 35 109-143 6-40 (319)
338 4ffl_A PYLC; amino acid, biosy 93.7 0.056 1.9E-06 52.8 4.9 35 109-143 1-35 (363)
339 3gg2_A Sugar dehydrogenase, UD 93.7 0.052 1.8E-06 55.1 4.7 33 110-142 3-35 (450)
340 3k96_A Glycerol-3-phosphate de 93.7 0.059 2E-06 52.9 5.0 34 109-142 29-62 (356)
341 2dpo_A L-gulonate 3-dehydrogen 93.6 0.051 1.8E-06 52.5 4.3 35 109-143 6-40 (319)
342 1x13_A NAD(P) transhydrogenase 93.4 0.061 2.1E-06 53.7 4.6 34 109-142 172-205 (401)
343 3hn2_A 2-dehydropantoate 2-red 93.3 0.048 1.6E-06 52.3 3.6 33 110-142 3-35 (312)
344 1l7d_A Nicotinamide nucleotide 93.3 0.072 2.4E-06 52.8 4.9 35 108-142 171-205 (384)
345 1hdo_A Biliverdin IX beta redu 93.3 0.079 2.7E-06 46.6 4.8 33 110-142 4-37 (206)
346 3dhn_A NAD-dependent epimerase 93.2 0.071 2.4E-06 48.0 4.4 34 109-142 4-38 (227)
347 4e21_A 6-phosphogluconate dehy 93.2 0.071 2.4E-06 52.4 4.7 37 106-142 19-55 (358)
348 2ewd_A Lactate dehydrogenase,; 93.1 0.07 2.4E-06 51.4 4.5 34 109-142 4-38 (317)
349 4g65_A TRK system potassium up 93.1 0.065 2.2E-06 54.5 4.4 33 110-142 4-36 (461)
350 1ks9_A KPA reductase;, 2-dehyd 93.1 0.079 2.7E-06 49.7 4.7 32 111-142 2-33 (291)
351 1evy_A Glycerol-3-phosphate de 93.1 0.063 2.2E-06 52.6 4.1 32 111-142 17-48 (366)
352 3dtt_A NADP oxidoreductase; st 93.1 0.082 2.8E-06 48.8 4.7 35 108-142 18-52 (245)
353 2y0c_A BCEC, UDP-glucose dehyd 93.0 0.078 2.7E-06 54.2 4.8 34 109-142 8-41 (478)
354 3g79_A NDP-N-acetyl-D-galactos 93.0 0.071 2.4E-06 54.4 4.4 35 109-143 18-54 (478)
355 2vns_A Metalloreductase steap3 93.0 0.078 2.7E-06 47.9 4.3 34 109-142 28-61 (215)
356 3g0o_A 3-hydroxyisobutyrate de 93.0 0.083 2.8E-06 50.4 4.7 34 109-142 7-40 (303)
357 4a7p_A UDP-glucose dehydrogena 92.9 0.078 2.7E-06 53.7 4.6 36 109-144 8-43 (446)
358 3k6j_A Protein F01G10.3, confi 92.9 0.13 4.6E-06 52.1 6.2 37 107-143 52-88 (460)
359 3pid_A UDP-glucose 6-dehydroge 92.8 0.094 3.2E-06 52.8 5.0 34 109-143 36-69 (432)
360 3gvi_A Malate dehydrogenase; N 92.8 0.097 3.3E-06 50.6 4.9 36 107-142 5-41 (324)
361 1pjq_A CYSG, siroheme synthase 92.7 0.079 2.7E-06 53.8 4.4 34 109-142 12-45 (457)
362 4id9_A Short-chain dehydrogena 92.7 0.081 2.8E-06 50.9 4.3 37 106-142 16-53 (347)
363 3tl2_A Malate dehydrogenase; c 92.7 0.1 3.5E-06 50.3 4.9 35 107-141 6-41 (315)
364 1zcj_A Peroxisomal bifunctiona 92.6 0.12 4.1E-06 52.6 5.6 36 107-142 35-70 (463)
365 3qsg_A NAD-binding phosphogluc 92.6 0.072 2.5E-06 51.2 3.7 33 109-141 24-57 (312)
366 2hjr_A Malate dehydrogenase; m 92.6 0.1 3.6E-06 50.5 4.9 35 109-143 14-49 (328)
367 1z82_A Glycerol-3-phosphate de 92.6 0.095 3.2E-06 50.7 4.6 35 108-142 13-47 (335)
368 1pjc_A Protein (L-alanine dehy 92.6 0.1 3.4E-06 51.3 4.8 34 109-142 167-200 (361)
369 2eez_A Alanine dehydrogenase; 92.6 0.1 3.4E-06 51.4 4.8 34 109-142 166-199 (369)
370 3pef_A 6-phosphogluconate dehy 92.5 0.097 3.3E-06 49.4 4.4 33 110-142 2-34 (287)
371 2uyy_A N-PAC protein; long-cha 92.5 0.11 3.8E-06 49.7 4.9 34 109-142 30-63 (316)
372 1t2d_A LDH-P, L-lactate dehydr 92.5 0.11 3.9E-06 50.1 5.0 34 109-142 4-38 (322)
373 4huj_A Uncharacterized protein 92.5 0.053 1.8E-06 49.3 2.4 34 109-142 23-57 (220)
374 1vg0_A RAB proteins geranylger 92.5 0.11 3.8E-06 55.0 5.2 37 109-145 8-44 (650)
375 2h78_A Hibadh, 3-hydroxyisobut 92.4 0.084 2.9E-06 50.2 3.9 34 109-142 3-36 (302)
376 1y56_A Hypothetical protein PH 92.3 0.18 6.3E-06 51.5 6.6 17 215-231 299-315 (493)
377 2pzm_A Putative nucleotide sug 92.3 0.15 5.3E-06 48.8 5.6 38 105-142 16-54 (330)
378 2vhw_A Alanine dehydrogenase; 92.3 0.12 4E-06 51.2 4.8 35 108-142 167-201 (377)
379 4dll_A 2-hydroxy-3-oxopropiona 92.3 0.097 3.3E-06 50.4 4.2 34 109-142 31-64 (320)
380 3g17_A Similar to 2-dehydropan 92.2 0.07 2.4E-06 50.7 3.0 33 110-142 3-35 (294)
381 3qvo_A NMRA family protein; st 92.1 0.11 3.7E-06 47.4 4.1 36 107-142 21-58 (236)
382 3ego_A Probable 2-dehydropanto 92.1 0.13 4.5E-06 49.2 4.9 33 109-142 2-34 (307)
383 3pdu_A 3-hydroxyisobutyrate de 92.1 0.069 2.4E-06 50.5 2.8 33 110-142 2-34 (287)
384 3l6d_A Putative oxidoreductase 92.0 0.15 5.2E-06 48.7 5.2 34 109-142 9-42 (306)
385 2aef_A Calcium-gated potassium 92.0 0.088 3E-06 48.0 3.3 33 109-142 9-41 (234)
386 4ezb_A Uncharacterized conserv 92.0 0.12 4.1E-06 49.8 4.4 34 109-142 24-58 (317)
387 3r6d_A NAD-dependent epimerase 91.9 0.17 5.7E-06 45.4 5.1 34 109-142 5-40 (221)
388 1nyt_A Shikimate 5-dehydrogena 91.9 0.14 4.8E-06 48.1 4.7 34 109-142 119-152 (271)
389 1dlj_A UDP-glucose dehydrogena 91.9 0.14 4.6E-06 51.1 4.9 31 111-142 2-32 (402)
390 2q3e_A UDP-glucose 6-dehydroge 91.9 0.093 3.2E-06 53.4 3.7 34 109-142 5-40 (467)
391 2pv7_A T-protein [includes: ch 91.8 0.19 6.4E-06 47.8 5.6 34 109-142 21-55 (298)
392 3hwr_A 2-dehydropantoate 2-red 91.8 0.13 4.5E-06 49.4 4.5 33 109-142 19-51 (318)
393 1jw9_B Molybdopterin biosynthe 91.8 0.11 3.8E-06 48.2 3.8 34 109-142 31-65 (249)
394 1mv8_A GMD, GDP-mannose 6-dehy 91.7 0.1 3.5E-06 52.6 3.8 32 111-142 2-33 (436)
395 1zej_A HBD-9, 3-hydroxyacyl-CO 91.7 0.15 5.1E-06 48.6 4.7 33 109-142 12-44 (293)
396 2o3j_A UDP-glucose 6-dehydroge 91.6 0.11 3.9E-06 53.0 4.0 34 109-142 9-44 (481)
397 2rir_A Dipicolinate synthase, 91.6 0.15 5.2E-06 48.5 4.7 35 108-142 156-190 (300)
398 3d4o_A Dipicolinate synthase s 91.5 0.16 5.4E-06 48.2 4.7 35 108-142 154-188 (293)
399 4b4o_A Epimerase family protei 91.5 0.15 5.3E-06 47.9 4.6 32 111-142 2-34 (298)
400 3i6i_A Putative leucoanthocyan 91.5 0.14 4.8E-06 49.4 4.3 36 107-142 8-44 (346)
401 3phh_A Shikimate dehydrogenase 91.4 0.17 6E-06 47.5 4.8 34 109-142 118-151 (269)
402 3vps_A TUNA, NAD-dependent epi 91.4 0.16 5.4E-06 48.1 4.6 35 109-143 7-42 (321)
403 1y6j_A L-lactate dehydrogenase 91.4 0.16 5.6E-06 48.9 4.7 34 109-142 7-42 (318)
404 3cky_A 2-hydroxymethyl glutara 91.4 0.13 4.3E-06 48.7 3.9 34 109-142 4-37 (301)
405 1ur5_A Malate dehydrogenase; o 91.4 0.17 5.7E-06 48.6 4.7 33 110-142 3-36 (309)
406 1y1p_A ARII, aldehyde reductas 91.3 0.21 7.2E-06 47.6 5.4 36 107-142 9-45 (342)
407 3q2o_A Phosphoribosylaminoimid 91.3 0.2 6.8E-06 49.4 5.4 36 108-143 13-48 (389)
408 3ew7_A LMO0794 protein; Q8Y8U8 91.3 0.18 6.1E-06 44.9 4.6 32 111-142 2-34 (221)
409 2izz_A Pyrroline-5-carboxylate 91.3 0.16 5.4E-06 49.0 4.4 36 107-142 20-59 (322)
410 2z1m_A GDP-D-mannose dehydrata 91.2 0.18 6.1E-06 48.2 4.8 35 109-143 3-38 (345)
411 2v6b_A L-LDH, L-lactate dehydr 91.2 0.16 5.6E-06 48.5 4.5 32 111-142 2-35 (304)
412 1x0v_A GPD-C, GPDH-C, glycerol 91.2 0.092 3.2E-06 51.0 2.7 35 109-143 8-49 (354)
413 3l9w_A Glutathione-regulated p 91.2 0.16 5.4E-06 50.9 4.5 35 109-143 4-38 (413)
414 3c24_A Putative oxidoreductase 91.2 0.22 7.5E-06 46.9 5.3 34 109-142 11-45 (286)
415 1jay_A Coenzyme F420H2:NADP+ o 91.2 0.19 6.6E-06 44.8 4.7 32 111-142 2-34 (212)
416 2egg_A AROE, shikimate 5-dehyd 91.1 0.2 6.8E-06 47.8 5.0 34 109-142 141-175 (297)
417 3p7m_A Malate dehydrogenase; p 91.1 0.21 7E-06 48.3 5.0 34 109-142 5-39 (321)
418 3ond_A Adenosylhomocysteinase; 91.0 0.18 6.3E-06 51.3 4.8 35 108-142 264-298 (488)
419 2wtb_A MFP2, fatty acid multif 91.0 0.29 9.8E-06 52.7 6.5 36 108-143 311-346 (725)
420 3ggo_A Prephenate dehydrogenas 91.0 0.23 7.8E-06 47.7 5.2 34 109-142 33-68 (314)
421 3gyx_A Adenylylsulfate reducta 90.9 0.21 7.3E-06 53.1 5.3 33 110-142 23-61 (662)
422 3gvp_A Adenosylhomocysteinase 90.8 0.17 5.8E-06 50.7 4.2 35 108-142 219-253 (435)
423 3pqe_A L-LDH, L-lactate dehydr 90.8 0.19 6.3E-06 48.7 4.4 34 109-142 5-40 (326)
424 2bs2_A Quinol-fumarate reducta 90.7 0.29 1E-05 52.0 6.2 34 110-143 6-39 (660)
425 4e4t_A Phosphoribosylaminoimid 90.7 0.25 8.5E-06 49.5 5.4 37 107-143 33-69 (419)
426 1chu_A Protein (L-aspartate ox 90.6 0.28 9.6E-06 50.8 5.9 35 109-144 8-42 (540)
427 1guz_A Malate dehydrogenase; o 90.6 0.22 7.6E-06 47.7 4.8 33 111-143 2-36 (310)
428 2zyd_A 6-phosphogluconate dehy 90.6 0.19 6.3E-06 51.4 4.4 37 106-142 12-48 (480)
429 1p77_A Shikimate 5-dehydrogena 90.6 0.16 5.4E-06 47.7 3.7 34 109-142 119-152 (272)
430 2a9f_A Putative malic enzyme ( 90.6 0.2 6.7E-06 49.5 4.4 33 109-141 188-221 (398)
431 2g5c_A Prephenate dehydrogenas 90.6 0.22 7.7E-06 46.6 4.7 33 110-142 2-36 (281)
432 2cvz_A Dehydrogenase, 3-hydrox 90.6 0.17 5.8E-06 47.5 3.8 32 110-142 2-33 (289)
433 2ydy_A Methionine adenosyltran 90.6 0.21 7.3E-06 47.2 4.6 34 109-142 2-36 (315)
434 2qyt_A 2-dehydropantoate 2-red 90.5 0.13 4.5E-06 48.9 3.0 31 110-140 9-45 (317)
435 3mog_A Probable 3-hydroxybutyr 90.4 0.21 7.3E-06 51.0 4.7 35 109-143 5-39 (483)
436 3ce6_A Adenosylhomocysteinase; 90.4 0.25 8.5E-06 50.5 5.1 35 108-142 273-307 (494)
437 3h2s_A Putative NADH-flavin re 90.3 0.24 8.2E-06 44.2 4.5 32 111-142 2-34 (224)
438 1kjq_A GART 2, phosphoribosylg 90.3 0.31 1.1E-05 47.8 5.7 36 108-143 10-45 (391)
439 2we8_A Xanthine dehydrogenase; 90.3 0.26 9E-06 48.8 5.0 37 109-145 204-240 (386)
440 2rcy_A Pyrroline carboxylate r 90.2 0.19 6.7E-06 46.4 3.9 35 109-143 4-42 (262)
441 3enk_A UDP-glucose 4-epimerase 90.2 0.29 9.8E-06 46.8 5.2 36 108-143 4-40 (341)
442 2ahr_A Putative pyrroline carb 90.2 0.29 9.8E-06 45.2 5.0 34 109-142 3-36 (259)
443 3vrd_B FCCB subunit, flavocyto 90.2 0.42 1.4E-05 46.9 6.5 85 122-230 170-259 (401)
444 2dkn_A 3-alpha-hydroxysteroid 90.1 0.25 8.6E-06 44.9 4.5 33 110-142 2-35 (255)
445 3orq_A N5-carboxyaminoimidazol 90.1 0.3 1E-05 48.1 5.3 36 108-143 11-46 (377)
446 1vl6_A Malate oxidoreductase; 90.1 0.23 7.9E-06 48.9 4.4 33 109-141 192-225 (388)
447 3tri_A Pyrroline-5-carboxylate 90.1 0.25 8.7E-06 46.5 4.6 34 109-142 3-39 (280)
448 2x4g_A Nucleoside-diphosphate- 90.0 0.27 9.3E-06 46.9 4.9 34 110-143 14-48 (342)
449 1yb1_A 17-beta-hydroxysteroid 90.0 0.34 1.2E-05 45.0 5.5 36 107-142 29-65 (272)
450 1txg_A Glycerol-3-phosphate de 90.0 0.19 6.4E-06 48.3 3.7 30 111-140 2-31 (335)
451 3slg_A PBGP3 protein; structur 90.0 0.22 7.6E-06 48.4 4.2 37 107-143 22-60 (372)
452 1ff9_A Saccharopine reductase; 89.9 0.22 7.5E-06 50.4 4.2 35 108-142 2-36 (450)
453 3c7a_A Octopine dehydrogenase; 89.9 0.21 7.3E-06 49.5 4.1 31 110-140 3-34 (404)
454 2b69_A UDP-glucuronate decarbo 89.9 0.27 9.3E-06 47.2 4.7 35 108-142 26-61 (343)
455 4aj2_A L-lactate dehydrogenase 89.8 0.32 1.1E-05 47.1 5.1 36 107-142 17-54 (331)
456 1vpd_A Tartronate semialdehyde 89.8 0.21 7.2E-06 47.2 3.8 33 110-142 6-38 (299)
457 3o38_A Short chain dehydrogena 89.8 0.3 1E-05 45.2 4.7 36 107-142 20-57 (266)
458 1hyh_A L-hicdh, L-2-hydroxyiso 89.7 0.22 7.6E-06 47.6 3.9 33 110-142 2-36 (309)
459 2dbq_A Glyoxylate reductase; D 89.7 0.31 1.1E-05 47.2 5.0 36 107-142 148-183 (334)
460 3h9u_A Adenosylhomocysteinase; 89.7 0.24 8.1E-06 49.7 4.2 35 108-142 210-244 (436)
461 3sc6_A DTDP-4-dehydrorhamnose 89.7 0.26 9E-06 45.9 4.4 31 111-141 7-38 (287)
462 3ojo_A CAP5O; rossmann fold, c 89.7 0.21 7.1E-06 50.3 3.8 35 109-143 11-45 (431)
463 3don_A Shikimate dehydrogenase 89.6 0.2 7E-06 47.2 3.5 34 109-142 117-151 (277)
464 3n58_A Adenosylhomocysteinase; 89.6 0.24 8.3E-06 49.7 4.1 35 108-142 246-280 (464)
465 1qyc_A Phenylcoumaran benzylic 89.6 0.25 8.7E-06 46.4 4.2 34 109-142 4-38 (308)
466 2f1k_A Prephenate dehydrogenas 89.6 0.29 9.9E-06 45.7 4.5 32 111-142 2-33 (279)
467 2c5a_A GDP-mannose-3', 5'-epim 89.6 0.38 1.3E-05 47.0 5.6 35 108-142 28-63 (379)
468 4gbj_A 6-phosphogluconate dehy 89.5 0.19 6.4E-06 47.9 3.2 34 109-142 5-38 (297)
469 3gt0_A Pyrroline-5-carboxylate 89.5 0.3 1E-05 44.8 4.6 34 109-142 2-39 (247)
470 1leh_A Leucine dehydrogenase; 89.5 0.3 1E-05 47.9 4.8 34 108-141 172-205 (364)
471 3ldh_A Lactate dehydrogenase; 89.5 0.4 1.4E-05 46.4 5.5 34 109-142 21-56 (330)
472 1lu9_A Methylene tetrahydromet 89.5 0.34 1.2E-05 45.7 5.0 34 109-142 119-153 (287)
473 3ruf_A WBGU; rossmann fold, UD 89.4 0.31 1.1E-05 46.8 4.8 35 109-143 25-60 (351)
474 1yj8_A Glycerol-3-phosphate de 89.4 0.19 6.4E-06 49.5 3.2 34 110-143 22-62 (375)
475 1nvt_A Shikimate 5'-dehydrogen 89.4 0.35 1.2E-05 45.6 5.0 33 109-142 128-160 (287)
476 3k5i_A Phosphoribosyl-aminoimi 89.4 0.26 9E-06 49.0 4.3 36 106-142 21-56 (403)
477 3tnl_A Shikimate dehydrogenase 89.3 0.32 1.1E-05 46.8 4.6 34 109-142 154-188 (315)
478 2gcg_A Glyoxylate reductase/hy 89.3 0.33 1.1E-05 47.0 4.8 36 107-142 153-188 (330)
479 3d0o_A L-LDH 1, L-lactate dehy 89.3 0.28 9.7E-06 47.1 4.3 35 108-142 5-41 (317)
480 3fi9_A Malate dehydrogenase; s 89.3 0.31 1.1E-05 47.4 4.6 34 109-142 8-44 (343)
481 2i6t_A Ubiquitin-conjugating e 89.3 0.26 8.8E-06 47.2 4.0 34 109-142 14-49 (303)
482 1n7h_A GDP-D-mannose-4,6-dehyd 89.2 0.32 1.1E-05 47.4 4.8 34 109-142 28-62 (381)
483 4gwg_A 6-phosphogluconate dehy 89.2 0.29 9.8E-06 50.0 4.5 34 109-142 4-37 (484)
484 3k31_A Enoyl-(acyl-carrier-pro 89.2 0.41 1.4E-05 45.3 5.4 36 107-142 28-66 (296)
485 3f9i_A 3-oxoacyl-[acyl-carrier 89.2 0.31 1.1E-05 44.5 4.4 37 106-142 11-48 (249)
486 3jyo_A Quinate/shikimate dehyd 89.2 0.34 1.2E-05 45.8 4.7 34 109-142 127-161 (283)
487 2d0i_A Dehydrogenase; structur 89.1 0.48 1.6E-05 45.9 5.8 36 107-142 144-179 (333)
488 3ek2_A Enoyl-(acyl-carrier-pro 89.0 0.31 1.1E-05 45.0 4.3 38 105-142 10-50 (271)
489 3ax6_A Phosphoribosylaminoimid 89.0 0.34 1.2E-05 47.5 4.7 33 110-142 2-34 (380)
490 3vku_A L-LDH, L-lactate dehydr 89.0 0.3 1E-05 47.2 4.3 34 109-142 9-44 (326)
491 2gf2_A Hibadh, 3-hydroxyisobut 89.0 0.26 8.8E-06 46.5 3.7 32 111-142 2-33 (296)
492 3vtz_A Glucose 1-dehydrogenase 88.9 0.34 1.2E-05 45.1 4.5 38 105-142 10-48 (269)
493 1cyd_A Carbonyl reductase; sho 88.9 0.42 1.4E-05 43.3 5.1 35 108-142 6-41 (244)
494 3dqp_A Oxidoreductase YLBE; al 88.9 0.38 1.3E-05 42.9 4.7 32 111-142 2-34 (219)
495 1ek6_A UDP-galactose 4-epimera 88.8 0.36 1.2E-05 46.3 4.7 34 109-142 2-36 (348)
496 3o8q_A Shikimate 5-dehydrogena 88.8 0.41 1.4E-05 45.2 5.0 34 109-142 126-160 (281)
497 2r6j_A Eugenol synthase 1; phe 88.8 0.3 1E-05 46.3 4.1 35 109-143 11-46 (318)
498 3ko8_A NAD-dependent epimerase 88.8 0.37 1.3E-05 45.4 4.7 33 110-142 1-34 (312)
499 1yb4_A Tartronic semialdehyde 88.7 0.19 6.6E-06 47.3 2.7 32 110-142 4-35 (295)
500 2hk9_A Shikimate dehydrogenase 88.7 0.25 8.4E-06 46.5 3.3 34 109-142 129-162 (275)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=1.4e-54 Score=453.17 Aligned_cols=323 Identities=35% Similarity=0.585 Sum_probs=256.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (441)
..+++||||||||+||+++|+.|++.+++|||||+++++.|.|+||+++.|.++.+++..++++.. +.+..++.|+.+
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~--~~~~~~v~~~~~ 116 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFA--LKKKGNVTYYEA 116 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHH--TTCSSCEEEEEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHH--HhhcCCeEEEEE
Confidence 344679999999999999999999999999999999999999999999999998888888887763 234568999999
Q ss_pred EEEEEeCCCCEEEEEecCC---------CCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHH
Q 013546 186 SCIGIDTDKHEVYCETVNN---------GKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKK 256 (441)
Q Consensus 186 ~v~~id~~~~~v~~~~~~~---------~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~ 256 (441)
+|++||++.++|+++.... ......++..+++||+||||||++|+.+++||.+++++++++++|+.+++++
T Consensus 117 ~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~ 196 (502)
T 4g6h_A 117 EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRT 196 (502)
T ss_dssp EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHH
T ss_pred EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHH
Confidence 9999999999998875311 0001123346899999999999999999999999999999999999999887
Q ss_pred HHHhc-------------------ccccCCCCceeEeeC-------------------ceEEE-------EccCCcccC-
Q 013546 257 LLLNL-------------------MLSENPGDTVQLFSK-------------------YFVIT-------ITLSFLVRL- 290 (441)
Q Consensus 257 i~~~~-------------------~~a~~~G~~~vE~a~-------------------~v~V~-------il~~~~~~l- 290 (441)
+...+ .+.+ +|.+|+|+|. .++|+ +++.+++++
T Consensus 197 l~~~~e~a~~~~~~~~~~~~~~~vvVvG-gG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~ 275 (502)
T 4g6h_A 197 FAANLEKANLLPKGDPERRRLLSIVVVG-GGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLS 275 (502)
T ss_dssp HHHHHHHHHHSCTTCHHHHHHTEEEEEC-CSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHH
T ss_pred HHHHHHHHhcccccchhhccccceEEEC-CCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHH
Confidence 64332 2222 6777777761 12333 111111100
Q ss_pred ---------------------------------------------------------------------------Cceee
Q 013546 291 ---------------------------------------------------------------------------SQIGV 295 (441)
Q Consensus 291 ---------------------------------------------------------------------------G~I~V 295 (441)
|+|.|
T Consensus 276 ~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~V 355 (502)
T 4g6h_A 276 SYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAV 355 (502)
T ss_dssp HHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEB
T ss_pred HHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeE
Confidence 78999
Q ss_pred CCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcccc-----CCCc----ccccCCCCCCC
Q 013546 296 DEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNKKIGEQD-----GGKA----LSAKDINLGDP 366 (441)
Q Consensus 296 d~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~l~~~~-----~g~~----~~~~~~~~~~~ 366 (441)
|++||++++|||||+|||+.. +.|++++.|++||+++|+||.+...... .+.. ....+.++ +|
T Consensus 356 d~~lq~~~~~~IfAiGD~a~~-------~~p~~a~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p 427 (502)
T 4g6h_A 356 NDFLQVKGSNNIFAIGDNAFA-------GLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNF-KP 427 (502)
T ss_dssp CTTSBBTTCSSEEECGGGEES-------SSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHHTTC-CC
T ss_pred CCccccCCCCCEEEEEcccCC-------CCCCchHHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcCCCC-CC
Confidence 999999999999999999964 4689999999999999999986432000 0000 00011254 99
Q ss_pred ceeecceeEEEecCCceeeecccccCCCCeEEccHHHHHHHHHHHHhhcCCcchhHHhHHHHHHHhccCCCCCC
Q 013546 367 FVYKHLGSMATVGRYKALVDLRQSKDEKGISLAGFLSWLIWRSAYLTRVLSWRNRFYVAVNWATTFVFGRDISR 440 (441)
Q Consensus 367 f~~~~~g~~~~lG~~~av~~~~~~~~~~~~~~~G~~a~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 440 (441)
|+|.++|+|++||+++||++++++. ..++.++|++||++|+++|+.++++||||++++++|++++|||||++|
T Consensus 428 F~y~~~G~~a~lG~~~av~~~~~~~-~~~~~~~G~~a~~~w~~~yl~~l~~~r~r~~v~~~W~~~~~fgRdisr 500 (502)
T 4g6h_A 428 FKYNDLGALAYLGSERAIATIRSGK-RTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFK 500 (502)
T ss_dssp CCCCCCEEEEECSTTCEEEEEEETT-EEEEEEEEHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHSCCCCCT
T ss_pred CEecCcceEEEEeCCceEEEccCCC-ccceecccHHHHHHHHHHHHHHccchhhhHHHHHHHHHHHhCCCCCcC
Confidence 9999999999999999999986532 134677899999999999999999999999999999999999999997
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=1.7e-40 Score=340.59 Aligned_cols=302 Identities=20% Similarity=0.204 Sum_probs=228.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLAS 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (441)
.|+|||||||+||+++|..|++. +++|||||+++++.|.|+++.+..|..+.+++..+++++ +. ..+++|+.++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~---~~-~~gv~~i~~~ 77 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPL---LP-KFNIEFINEK 77 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTT---GG-GGTEEEECSC
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHH---HH-HCCcEEEEeE
Confidence 46899999999999999999874 489999999999999999999999998888888887775 32 3589999999
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcc----
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLM---- 262 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~---- 262 (441)
|++||+++++|+++++ .+++||+||||||+++. +++||.+++++.+++++++.++++++.+...
T Consensus 78 v~~Id~~~~~V~~~~g-----------~~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~ 145 (430)
T 3hyw_A 78 AESIDPDANTVTTQSG-----------KKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYANPGP 145 (430)
T ss_dssp EEEEETTTTEEEETTC-----------CEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCEEEECCC-----------CEEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhccCCce
Confidence 9999999999987653 37999999999999864 5799998999999999999998887643211
Q ss_pred cccCCCCceeEee-------------------------------------------------------CceEE------E
Q 013546 263 LSENPGDTVQLFS-------------------------------------------------------KYFVI------T 281 (441)
Q Consensus 263 ~a~~~G~~~vE~a-------------------------------------------------------~~v~V------~ 281 (441)
+.. +|..|+|++ .++++ +
T Consensus 146 vv~-gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~ 224 (430)
T 3hyw_A 146 VVI-GAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVK 224 (430)
T ss_dssp EEE-EECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEE
T ss_pred EEE-eCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEE
Confidence 100 111122211 00111 0
Q ss_pred -------Ecc---------------------------CCcccC-----CceeeCCCcccCCCCCEEEecccccccccCCC
Q 013546 282 -------ITL---------------------------SFLVRL-----SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGK 322 (441)
Q Consensus 282 -------il~---------------------------~~~~~l-----G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~ 322 (441)
++. .....+ |+|.||++||++++|||||+|||+++++..+.
T Consensus 225 ~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~ 304 (430)
T 3hyw_A 225 AIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKT 304 (430)
T ss_dssp EECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCC
T ss_pred EEeCCceEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccC
Confidence 000 000000 67999999996699999999999998764432
Q ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhccccCCCcccccCCCCCCCceeecceeEEEecCCceeeecccccC--CCCeE
Q 013546 323 ---PVLPALAQVAERQGKYLAELFNKKIGEQDGGKALSAKDINLGDPFVYKHLGSMATVGRYKALVDLRQSKD--EKGIS 397 (441)
Q Consensus 323 ---~~~p~~a~~A~~qg~~aA~nI~~~l~~~~~g~~~~~~~~~~~~~f~~~~~g~~~~lG~~~av~~~~~~~~--~~~~~ 397 (441)
...|++++.|++||+++|+||.+.|. |+ +. +++.+...+.++++|.+.++........ ...+.
T Consensus 305 ~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~----g~-------~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 372 (430)
T 3hyw_A 305 PIPTGVPKTGMMIEQMAMAVAHNIVNDIR----NN-------PD-KYAPRLSAICIADFGEDAGFFFADPVIPPRERVIT 372 (430)
T ss_dssp SSCCCCCCCHHHHHHHHHHHHHHHHHHHT----TC-------CC-CEEECCCEEEEEECSSSEEEEEEESSSSSCSEEEE
T ss_pred cCcCccchHHHHHHHHHHHHHHHHHHHhc----CC-------CC-CcccCCcEEEEEEcCCCcEEEEEcccCCccccccc
Confidence 13689999999999999999999996 66 32 4344445678899999999876532111 11233
Q ss_pred EccH---------HHHHHHHHHHHhhcCCcchhHHhHHHHHHHhccCCCCC
Q 013546 398 LAGF---------LSWLIWRSAYLTRVLSWRNRFYVAVNWATTFVFGRDIS 439 (441)
Q Consensus 398 ~~G~---------~a~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 439 (441)
..|. ..|++|+..|..+++.|+||+++.++|+....+.||+.
T Consensus 373 ~~g~~~~~~K~~~~~~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 423 (430)
T 3hyw_A 373 KMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCE 423 (430)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHCCCSEEECSCCC
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCccHhHHHHHHHHHhcccccccCcccc
Confidence 3444 45678888889999999999999999999999999874
No 3
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=4.6e-37 Score=317.07 Aligned_cols=186 Identities=12% Similarity=0.090 Sum_probs=133.9
Q ss_pred cccccCCCCCCCCCccccccccCCCcccCCCccccc--ccccCcCCCCcCCCcccCccchhhhhcccccccccCCCCCCC
Q 013546 26 DIGIEGLPTNKCFSPSLENVSRNSSLSYLPSSIRMT--THMSSWSRGIKTTPHYQYHNAERIVEESESEYQELSYPGLEA 103 (441)
Q Consensus 26 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~grvcp~--~ce~~c~~~~~~~~~~~~~~~e~~i~~~~~~~~~~~~~~~~~ 103 (441)
.-||+++++|+ |.+|+++++++||||++||||||+ +||.+|+++.....++.++.+|+++.|.+++ .+|..+.+
T Consensus 41 ~~~~~~~~~g~-~~~A~~~~~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~---~~~~~~~~ 116 (456)
T 2vdc_G 41 PDWLKLTSEGR-LEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWD---QGWVKPRT 116 (456)
T ss_dssp HHHHHHHHHTC-HHHHHHHHHHHCSCHHHHHHHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHH---HTCCCCCC
T ss_pred HHHHHHHHCCC-HHHHHHHHHhhCCCCccccccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHH---cCCCCCCC
Confidence 34999999999 999999999999999999999999 9999999996524567888999999987776 44544433
Q ss_pred CCCCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEE
Q 013546 104 TKPGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFY 183 (441)
Q Consensus 104 ~~~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 183 (441)
+...++++|+||||||||+++|..|++.|++|||||+.++++ +++ .+|.+.+..-...+....+.+. ..+++|+
T Consensus 117 ~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~G--G~l---~~gip~~~~~~~~~~~~~~~l~-~~gv~~~ 190 (456)
T 2vdc_G 117 PSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMG--GLL---VYGIPGFKLEKSVVERRVKLLA-DAGVIYH 190 (456)
T ss_dssp SCSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCS--THH---HHTSCTTTSCHHHHHHHHHHHH-HTTCEEE
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCC--Cee---eecCCCccCCHHHHHHHHHHHH-HCCcEEE
Confidence 334567899999999999999999999999999999998765 222 1222222110111122222222 3467776
Q ss_pred EEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCC-cCCCCCCCcc
Q 013546 184 LASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAE-PLTFGIKGVK 238 (441)
Q Consensus 184 ~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~-p~~~~ipG~~ 238 (441)
.+..++ +.+.+.+ ..+.||+||||||+. |+.+++||.+
T Consensus 191 ~~~~v~-----~~v~~~~------------~~~~~d~vvlAtG~~~~~~~~ipG~~ 229 (456)
T 2vdc_G 191 PNFEVG-----RDASLPE------------LRRKHVAVLVATGVYKARDIKAPGSG 229 (456)
T ss_dssp TTCCBT-----TTBCHHH------------HHSSCSEEEECCCCCEECCTTCSCCT
T ss_pred eCCEec-----cEEEhhH------------hHhhCCEEEEecCCCCCCCCCCCCCc
Confidence 554321 1122211 246799999999996 7788899864
No 4
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=1.3e-33 Score=317.31 Aligned_cols=186 Identities=13% Similarity=0.116 Sum_probs=130.8
Q ss_pred ccccCCCCCCCCCccccccccCCCcccCCCccccc--ccccCcCCCCcCCCcccCccchhhhhcccccccccCCCCCCCC
Q 013546 27 IGIEGLPTNKCFSPSLENVSRNSSLSYLPSSIRMT--THMSSWSRGIKTTPHYQYHNAERIVEESESEYQELSYPGLEAT 104 (441)
Q Consensus 27 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~grvcp~--~ce~~c~~~~~~~~~~~~~~~e~~i~~~~~~~~~~~~~~~~~~ 104 (441)
-||+++++|+ |++|++++++|||||++||||||+ +||.+|+++.....++.|+.+|+++.|..++. ++.....+
T Consensus 99 ~~~~~~~~g~-~~~A~~~~~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~---~~~~~~~p 174 (1025)
T 1gte_A 99 SFITSISNKN-YYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAM---NIPQIRNP 174 (1025)
T ss_dssp HHHHHHHTTC-HHHHHHHHHHHCTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHH---TCCCCCCT
T ss_pred HHHHHHHCCC-HHHHHHHHHhcCChhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHh---CCccccCc
Confidence 4999999999 999999999999999999999998 89999999865445778999999999976653 33222111
Q ss_pred --------CCCCCCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhc
Q 013546 105 --------KPGEKPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLS 175 (441)
Q Consensus 105 --------~~~~~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~ 175 (441)
+..++++|+||||||||+++|..|++.|+ +|||||+.++++. ++ .++.+.+......+....+.+
T Consensus 175 ~~~~~~~~~~~~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG--~~---~~~ip~~~~~~~~~~~~~~~~- 248 (1025)
T 1gte_A 175 CLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGG--LS---TSEIPQFRLPYDVVNFEIELM- 248 (1025)
T ss_dssp TSCCGGGSCGGGGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCST--HH---HHTSCTTTSCHHHHHHHHHHH-
T ss_pred cccccccCCccCCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCc--cc---cccCCcccCCHHHHHHHHHHH-
Confidence 11346799999999999999999999999 7999999887652 22 222322221111122212222
Q ss_pred CCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCC-CcCCCCC-CCc
Q 013546 176 SDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGA-EPLTFGI-KGV 237 (441)
Q Consensus 176 ~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs-~p~~~~i-pG~ 237 (441)
+..+++++.+..++. +.+++.+. .++.||+||||||+ .|+.+++ ||.
T Consensus 249 ~~~gv~~~~~~~v~~----~~v~~~~~-----------~~~~~d~vvlAtGa~~p~~l~~~~G~ 297 (1025)
T 1gte_A 249 KDLGVKIICGKSLSE----NEITLNTL-----------KEEGYKAAFIGIGLPEPKTDDIFQGL 297 (1025)
T ss_dssp HTTTCEEEESCCBST----TSBCHHHH-----------HHTTCCEEEECCCCCEECCCGGGTTC
T ss_pred HHCCcEEEcccEecc----ceEEhhhc-----------CccCCCEEEEecCCCCCCCCCCCCCC
Confidence 345788877654321 22332221 24789999999999 5877654 454
No 5
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=8.9e-31 Score=268.83 Aligned_cols=285 Identities=17% Similarity=0.114 Sum_probs=205.9
Q ss_pred CCcEEEECCCHHHHHHHHhhcc---CCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT---KIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~---~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (441)
+++|||||||++|+++|..|++ .|++|||||+++++.|.+.++....|....+++...+.+. +. ..++.++.+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~-~~gv~~~~~ 79 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHY---VE-RKGIHFIAQ 79 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHH---HH-TTTCEEECS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHH---HH-HCCCEEEEe
Confidence 5799999999999999999998 8999999999999999999888888877766666666665 32 357888889
Q ss_pred EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCccc---ccccccCHhHHHHHHHHHHHh--
Q 013546 186 SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKE---NAYFLREVNHAQEIRKKLLLN-- 260 (441)
Q Consensus 186 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~---~~~~l~~~~~a~~~~~~i~~~-- 260 (441)
+|++++.+.+.|.+.++ .++.||+||+|||++|+.+.+||.++ +++.+.+++++.++++.+...
T Consensus 80 ~v~~id~~~~~V~~~~g-----------~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 148 (437)
T 3sx6_A 80 SAEQIDAEAQNITLADG-----------NTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLR 148 (437)
T ss_dssp CEEEEETTTTEEEETTS-----------CEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCEEEECCC-----------CEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHh
Confidence 99999999888876542 36899999999999999999999863 566788888888777654221
Q ss_pred ---cccccC-C--CCce--eEee-------------------------------------------------CceEE---
Q 013546 261 ---LMLSEN-P--GDTV--QLFS-------------------------------------------------KYFVI--- 280 (441)
Q Consensus 261 ---~~~a~~-~--G~~~--vE~a-------------------------------------------------~~v~V--- 280 (441)
..+.+. . |..| +|+| .++++
T Consensus 149 ~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~ 228 (437)
T 3sx6_A 149 EPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTN 228 (437)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECS
T ss_pred CCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcC
Confidence 111110 0 1111 2221 00000
Q ss_pred ---E------------------------------EccC------------CcccCCceeeCCCcccCCCCCEEEeccccc
Q 013546 281 ---T------------------------------ITLS------------FLVRLSQIGVDEWLRAPSVEDVFALGDCAG 315 (441)
Q Consensus 281 ---~------------------------------il~~------------~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~ 315 (441)
+ +.+. +..+-|+|.||++|||+++|||||+|||+.
T Consensus 229 ~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~ 308 (437)
T 3sx6_A 229 CKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIA 308 (437)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEECGGGBC
T ss_pred CEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEEEEEEEec
Confidence 0 0000 000018899999999989999999999998
Q ss_pred ccccCCCC---CCCchHHHHHHHHHHHHHHHHHHhccccCCCcccccCCCCCCCceeecce-eEEEecCCceeeec-ccc
Q 013546 316 FLEQTGKP---VLPALAQVAERQGKYLAELFNKKIGEQDGGKALSAKDINLGDPFVYKHLG-SMATVGRYKALVDL-RQS 390 (441)
Q Consensus 316 ~~~~~G~~---~~p~~a~~A~~qg~~aA~nI~~~l~~~~~g~~~~~~~~~~~~~f~~~~~g-~~~~lG~~~av~~~-~~~ 390 (441)
+++..+.+ ..|++++.|++||+.+|+||.+.|. |+ ++ .+|.+.... .++.+|.+.++... +..
T Consensus 309 ~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~----g~-------~~-~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 376 (437)
T 3sx6_A 309 IPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLE----GR-------KG-EQTMGTWNAVAFADMGDRGAAFIALPQL 376 (437)
T ss_dssp CCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTT----TS-------CC-CCCCCSCCEEEEEECSSCEEEEEEESSS
T ss_pred cCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhc----CC-------CC-CCcccCcceEEEEEeCCCceEEEeCCCC
Confidence 76543321 2578999999999999999999996 66 32 676666444 45679987666422 100
Q ss_pred -cCCCCeEEccHHHHHHHHHHHHhhcCCcch
Q 013546 391 -KDEKGISLAGFLSWLIWRSAYLTRVLSWRN 420 (441)
Q Consensus 391 -~~~~~~~~~G~~a~~~~~~~~~~~~~~~~~ 420 (441)
+....+.+.|.++|++|..++..++..+++
T Consensus 377 p~~~~~~~~~g~~~~~~K~~~~~~f~~~~~~ 407 (437)
T 3sx6_A 377 KPRKVDVFAYGRWVHLAKVAFEKYFIRKMKM 407 (437)
T ss_dssp SSCSEEEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHhcc
Confidence 122467899999999999998888866554
No 6
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.97 E-value=9.8e-30 Score=257.69 Aligned_cols=267 Identities=19% Similarity=0.190 Sum_probs=185.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC--CeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI--YDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLAS 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g--~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (441)
+||||||||||||+++|.+|++.+ .+|||||+++++.+.|+++.+..|..+.+++..+++.+. . .+++|++++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~---~--~gv~~i~~~ 76 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLR---A--HGIQVVHDS 76 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHH---H--TTCEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHH---H--CCCEEEEeE
Confidence 689999999999999999998754 699999999999999999999988888777777776652 2 478999999
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCccc-----ccccccCHhHHHHHHHHHHHhc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKE-----NAYFLREVNHAQEIRKKLLLNL 261 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~-----~~~~l~~~~~a~~~~~~i~~~~ 261 (441)
|++||++.+.+.+.++ .+++||+||||||++++.+++||.++ ..+.+++.+++..+++.+....
T Consensus 77 v~~id~~~~~v~~~~g-----------~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~ 145 (401)
T 3vrd_B 77 ALGIDPDKKLVKTAGG-----------AEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMD 145 (401)
T ss_dssp EEEEETTTTEEEETTS-----------CEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSC
T ss_pred EEEEEccCcEEEeccc-----------ceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcc
Confidence 9999999999887653 37999999999999999999999753 3456778888888887764321
Q ss_pred c----cccCCCCce-------e----Eee-----------------------------------------CceEEE----
Q 013546 262 M----LSENPGDTV-------Q----LFS-----------------------------------------KYFVIT---- 281 (441)
Q Consensus 262 ~----~a~~~G~~~-------v----E~a-----------------------------------------~~v~V~---- 281 (441)
. +.. .+..+ . |++ ..+++.
T Consensus 146 ~~~~~v~~-~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~ 224 (401)
T 3vrd_B 146 DGGVVIIA-PPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPD 224 (401)
T ss_dssp TTCEEEEE-CCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTT
T ss_pred cCCcEEEe-cCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCce
Confidence 0 000 01000 0 000 001110
Q ss_pred ---------------------------EccC-----------CcccCCceeeCCC-cccCCCCCEEEecccccccccCCC
Q 013546 282 ---------------------------ITLS-----------FLVRLSQIGVDEW-LRAPSVEDVFALGDCAGFLEQTGK 322 (441)
Q Consensus 282 ---------------------------il~~-----------~~~~lG~I~Vd~~-lqt~~~~~VfA~GD~a~~~~~~G~ 322 (441)
+.+. +..+-|+|.||++ ||.+++|||||+|||+..
T Consensus 225 v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~------ 298 (401)
T 3vrd_B 225 AAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNA------ 298 (401)
T ss_dssp TCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCC------
T ss_pred EEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchhHhhccccccCCCEEECCCcceecCCCCEEEecccccC------
Confidence 0000 0000189999986 786699999999999832
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHhccccCCCcccccCCCCCCCceeecceeE-EEecCCceeeec-ccc---------c
Q 013546 323 PVLPALAQVAERQGKYLAELFNKKIGEQDGGKALSAKDINLGDPFVYKHLGSM-ATVGRYKALVDL-RQS---------K 391 (441)
Q Consensus 323 ~~~p~~a~~A~~qg~~aA~nI~~~l~~~~~g~~~~~~~~~~~~~f~~~~~g~~-~~lG~~~av~~~-~~~---------~ 391 (441)
.+.|++++.|++||+++|+||.+.|. |+ + +.||.|.....+ +..|....+... .++ .
T Consensus 299 ~~~pk~a~~A~~qa~v~A~ni~~~l~----G~-------~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 366 (401)
T 3vrd_B 299 APMPKSAYSANSQAKVAAAAVVALLK----GE-------E-PGTPSYLNTCYSILAPGYGISIAAVYRPNAEGKAIEAVP 366 (401)
T ss_dssp TTSCBSHHHHHHHHHHHHHHHHHHHH----TC-------C-CCCCCEEEEEEEEEETTEEEEEEEEEEECTTSSSEEECT
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhc----CC-------C-CCCcccCCeEEEEEecCCceEEEEEecccCCCceEEEec
Confidence 24689999999999999999999997 76 2 266666654322 222322222111 000 0
Q ss_pred CCCCeEEccHHHHHHHHHH
Q 013546 392 DEKGISLAGFLSWLIWRSA 410 (441)
Q Consensus 392 ~~~~~~~~G~~a~~~~~~~ 410 (441)
..++....++..|++|+..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~ 385 (401)
T 3vrd_B 367 DSGGITPVDAPDWVLEREV 385 (401)
T ss_dssp TCCEESCTTCCHHHHHHHH
T ss_pred ccCCcccccchhHHHhccc
Confidence 1134556678899988753
No 7
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=9.6e-29 Score=253.12 Aligned_cols=299 Identities=19% Similarity=0.171 Sum_probs=207.2
Q ss_pred CCcEEEECCCHHHHHHHHhhcc--CCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT--KIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLAS 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~--~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (441)
+++|+|||||+||+++|..|++ .|++|||||+++++.|.+.++....+....+++...+.+. + +..+++++.++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~-~~~gv~~~~~~ 77 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPL---L-PKFNIEFINEK 77 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTT---G-GGGTEEEECSC
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHH---H-HhcCCEEEEEE
Confidence 4689999999999999999999 8899999999999999888888887776666666666554 2 23578898899
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHh-----c
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLN-----L 261 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~-----~ 261 (441)
++.++.+.+.+.+.++ .++.||+||+|||++|+.|++.. ..+...+.+.+++.++.+.+... .
T Consensus 78 v~~id~~~~~v~~~~g-----------~~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~ 145 (430)
T 3h28_A 78 AESIDPDANTVTTQSG-----------KKIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQELYANPGP 145 (430)
T ss_dssp EEEEETTTTEEEETTC-----------CEEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCEEEECCC-----------cEEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHHHhcCCe
Confidence 9999999888776542 36899999999999987664321 23445566777776665443210 0
Q ss_pred ccccCC---CCc--------------------------------------------------------eeEee-------
Q 013546 262 MLSENP---GDT--------------------------------------------------------VQLFS------- 275 (441)
Q Consensus 262 ~~a~~~---G~~--------------------------------------------------------~vE~a------- 275 (441)
.+.+.+ +.. +|++-
T Consensus 146 vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 225 (430)
T 3h28_A 146 VVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKA 225 (430)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEE
T ss_pred EEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 000000 000 01110
Q ss_pred ---------C----ceEEE----E----------ccCC----cccCC-ceeeCCCcccCCCCCEEEecccccccccCCCC
Q 013546 276 ---------K----YFVIT----I----------TLSF----LVRLS-QIGVDEWLRAPSVEDVFALGDCAGFLEQTGKP 323 (441)
Q Consensus 276 ---------~----~v~V~----i----------l~~~----~~~lG-~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~ 323 (441)
+ ...+. + +... ..+-| +|.||+++||+++|||||+|||+.++++.+.+
T Consensus 226 v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~ 305 (430)
T 3h28_A 226 IEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTP 305 (430)
T ss_dssp ECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCS
T ss_pred EeCCeEEEEecCCCceEEeeeEEEECCCCccchhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCC
Confidence 0 00010 1 0011 01117 89999999998999999999999876533321
Q ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhccccCCCcccccCCCCCCCceeeccee-EEEecCCceeeecccc--cCCCCeE
Q 013546 324 ---VLPALAQVAERQGKYLAELFNKKIGEQDGGKALSAKDINLGDPFVYKHLGS-MATVGRYKALVDLRQS--KDEKGIS 397 (441)
Q Consensus 324 ---~~p~~a~~A~~qg~~aA~nI~~~l~~~~~g~~~~~~~~~~~~~f~~~~~g~-~~~lG~~~av~~~~~~--~~~~~~~ 397 (441)
..|++++.|++||+.+|+||.+.|. |+ + .++.+..... ++.+|...++...... +....+.
T Consensus 306 ~~~~~pk~~~~A~~~g~~aa~ni~~~l~----g~-------~--~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 372 (430)
T 3h28_A 306 IPTGVPKTGMMIEQMAMAVAHNIVNDIR----NN-------P--DKYAPRLSAICIADFGEDAGFFFADPVIPPRERVIT 372 (430)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHHHHHHT----TC-------C--CCEEECCCEEEEEECSSSEEEEEEESSSSSCSEEEE
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhc----CC-------C--CCCcCCcceEEEEEeCCCceEEEeCCCCCCccceee
Confidence 1578999999999999999999996 66 2 3456665544 4569987766532110 1224578
Q ss_pred EccHHHHHHHHHHHHhhcCCcchh--HHhHHHHHHHhccCC
Q 013546 398 LAGFLSWLIWRSAYLTRVLSWRNR--FYVAVNWATTFVFGR 436 (441)
Q Consensus 398 ~~G~~a~~~~~~~~~~~~~~~~~~--~~~~~~w~~~~~~~~ 436 (441)
+.|.++|++|..++..++..+|+- ......|+++.|+|-
T Consensus 373 ~~g~~~~~~K~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 413 (430)
T 3h28_A 373 KMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKV 413 (430)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHCC
T ss_pred cccHHHHHHHHHHHHHHHHHhccCCcCchhHHHHHHhhcCh
Confidence 899999999999999999887775 456667788875553
No 8
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.95 E-value=2.9e-27 Score=238.83 Aligned_cols=216 Identities=18% Similarity=0.209 Sum_probs=162.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCccc-ccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVF-TPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~-~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
..++.||+|||||+||+++|..|...+++|||||+++++.| .+.++....+..+.+++.....+. +. ..++.++.
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~---~~-~~~i~~~~ 81 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDW---YE-KNNIKVIT 81 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHH---HH-HTTCEEEC
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHH---HH-HCCCEEEe
Confidence 34467999999999999999999888999999999998866 577777777765555544444443 22 24677776
Q ss_pred E-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHH--hc
Q 013546 185 A-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLL--NL 261 (441)
Q Consensus 185 ~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~--~~ 261 (441)
+ +|++||.+.+.|++.++ .++.||+||||||++|+.|++||.+ +++.+++.+++.+++..+.. .+
T Consensus 82 ~~~V~~id~~~~~v~~~~g-----------~~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~~~~~v 149 (385)
T 3klj_A 82 SEFATSIDPNNKLVTLKSG-----------EKIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECKNKGKA 149 (385)
T ss_dssp SCCEEEEETTTTEEEETTS-----------CEEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEEECCCCEEEECCC-----------CEEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhhcCCeE
Confidence 5 79999999998877653 3789999999999999999999987 88889999999998876532 23
Q ss_pred ccccCCCCceeEeeC-----ceEEEEc-------cC-Ccc----------------------------------------
Q 013546 262 MLSENPGDTVQLFSK-----YFVITIT-------LS-FLV---------------------------------------- 288 (441)
Q Consensus 262 ~~a~~~G~~~vE~a~-----~v~V~il-------~~-~~~---------------------------------------- 288 (441)
.+.+ +|..|+|+|. ..+|+++ +. +++
T Consensus 150 vVIG-gG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ig~~~~~D~vv~a~G 228 (385)
T 3klj_A 150 FIIG-GGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMGDLIRSSCVITAVG 228 (385)
T ss_dssp EEEC-CSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGCHHHHHHSEEEECCC
T ss_pred EEEC-CCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEcCeEEecCeEEECcC
Confidence 3344 5677766651 1222211 00 000
Q ss_pred ---------c--C---CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 289 ---------R--L---SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 289 ---------~--l---G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
. + +.|.||++||| +.|+|||+|||+.+++ ..+.++..|++||+.+|+||.
T Consensus 229 ~~p~~~~~~~~gl~~~~gi~vd~~~~t-~~~~IyA~GD~a~~~~-----~~~~~~~~A~~qg~~aa~~i~ 292 (385)
T 3klj_A 229 VKPNLDFIKDTEIASKRGILVNDHMET-SIKDIYACGDVAEFYG-----KNPGLINIANKQGEVAGLNAC 292 (385)
T ss_dssp EEECCGGGTTSCCCBSSSEEECTTCBC-SSTTEEECGGGEEETT-----BCCCCHHHHHHHHHHHHHHHT
T ss_pred cccChhhhhhcCCCcCCCEEECCCccc-CCCCEEEEEeeEecCC-----CcccHHHHHHHHHHHHHHHhc
Confidence 0 0 45999999999 9999999999997643 246789999999999999997
No 9
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.94 E-value=1.5e-26 Score=237.46 Aligned_cols=222 Identities=20% Similarity=0.252 Sum_probs=158.2
Q ss_pred cEEEECCCHHHHHHHHhhccCC--CeEEEEcCCCCcccc-cchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE-EE
Q 013546 111 RVVVLGTGWGACRFLKGIDTKI--YDAVCISPRNHMVFT-PLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL-AS 186 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g--~~Vtvie~~~~~~~~-~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~ 186 (441)
|||||||||||++||..|++.| .+|+|||+++++.|. ++++....+............. .. +.+..++.+.. .+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~~~~~~~ 79 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTP-EK-FYDRKQITVKTYHE 79 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCH-HH-HHHHHCCEEEETEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCH-HH-HHHhcCCEEEeCCe
Confidence 7999999999999999998876 679999999988775 4566555554433221111111 01 22223566644 58
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHh----cc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLN----LM 262 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~----~~ 262 (441)
|+.||.+.+.+.+..... ++..++.||+||||||++|+.|++|| ++.+.+++++++..+.+.+... +.
T Consensus 80 V~~id~~~~~~~~~~~~~------~~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~~~~~~vv 151 (437)
T 4eqs_A 80 VIAINDERQTVSVLNRKT------NEQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKANQVDKVL 151 (437)
T ss_dssp EEEEETTTTEEEEEETTT------TEEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEEccCcEEEEEeccC------CceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhccCCcEEE
Confidence 999999999998877532 22357899999999999999999988 4667789999998887765322 23
Q ss_pred cccCCCCceeEeeC-----ceEEE-------EccCCcccC----------------------------------------
Q 013546 263 LSENPGDTVQLFSK-----YFVIT-------ITLSFLVRL---------------------------------------- 290 (441)
Q Consensus 263 ~a~~~G~~~vE~a~-----~v~V~-------il~~~~~~l---------------------------------------- 290 (441)
+.+ +|..++|+|. ..+|+ +++.+++++
T Consensus 152 ViG-gG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D 230 (437)
T 4eqs_A 152 VVG-AGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYD 230 (437)
T ss_dssp EEC-CSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECS
T ss_pred EEC-CccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeee
Confidence 333 5777777661 11222 111111110
Q ss_pred -------------------------CceeeCCCcccCCCCCEEEeccccccccc-CCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 -------------------------SQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 -------------------------G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|.||+++|| ++|||||+|||+..++. .|.+..+++++.|.+||+++|+||.
T Consensus 231 ~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 231 MIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFET-NVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp EEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBC-SSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred eEEEEeceecCcHHHHhhhhhhccCCcEecCCCccC-CCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc
Confidence 78999999999 99999999999987653 3555577899999999999999998
No 10
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.93 E-value=7.3e-26 Score=230.00 Aligned_cols=220 Identities=22% Similarity=0.276 Sum_probs=161.7
Q ss_pred CcEEEECCCHHHHHHHHhhcc---CCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEE
Q 013546 110 PRVVVLGTGWGACRFLKGIDT---KIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLAS 186 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~---~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (441)
++|+|||||++|+++|..|++ .|++|||||+++++.|.+.++....+....+++...+.+. +. ..++.++.++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~gv~~~~~~ 77 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEA---LP-EKGIQFQEGT 77 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHH---TG-GGTCEEEECE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHH---Hh-hCCeEEEEee
Confidence 589999999999999999999 8999999999999888887766666665655565556554 22 3478888889
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHh---ccc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLN---LML 263 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~---~~~ 263 (441)
|+.++.+.+.|.+.+... +..++.||+||+|+|++|+.+.+||.+++.+.+.+.+++.++++.+... ..+
T Consensus 78 v~~i~~~~~~V~~~~g~~-------~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV 150 (409)
T 3h8l_A 78 VEKIDAKSSMVYYTKPDG-------SMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIA 150 (409)
T ss_dssp EEEEETTTTEEEEECTTS-------CEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEE
T ss_pred EEEEeCCCCEEEEccCCc-------ccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEE
Confidence 999999999988876421 1245899999999999999999999877767777888888877755321 011
Q ss_pred ccCCC-------------------C------ceeEeeC-------------ceEEE------------------------
Q 013546 264 SENPG-------------------D------TVQLFSK-------------YFVIT------------------------ 281 (441)
Q Consensus 264 a~~~G-------------------~------~~vE~a~-------------~v~V~------------------------ 281 (441)
.+ +| . .++|++. .++|+
T Consensus 151 iG-~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~ 229 (409)
T 3h8l_A 151 IG-SGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYN 229 (409)
T ss_dssp EE-ECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSSSSTTBCHHHHHHHHHHHH
T ss_pred EE-ecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCccccccCHHHHHHHHHHHH
Confidence 11 11 0 0112210 01111
Q ss_pred ---------------------------------E----------ccCC--c--ccCCceeeCCCcccCCCCCEEEecccc
Q 013546 282 ---------------------------------I----------TLSF--L--VRLSQIGVDEWLRAPSVEDVFALGDCA 314 (441)
Q Consensus 282 ---------------------------------i----------l~~~--~--~~lG~I~Vd~~lqt~~~~~VfA~GD~a 314 (441)
+ +... + .+-|+|.||+++|++++|||||+|||+
T Consensus 230 ~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~ 309 (409)
T 3h8l_A 230 QLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDAN 309 (409)
T ss_dssp HHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGB
T ss_pred HCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCCEEeCcccccCCCCCEEEeehhc
Confidence 0 0011 0 011789999999998999999999999
Q ss_pred cccccCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Q 013546 315 GFLEQTGKPVLPALAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 315 ~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~l~ 348 (441)
.+ +.|+++..|..||+++|+||.+.|.
T Consensus 310 ~~-------~~~~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 310 SM-------TVPKLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp TT-------CCSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred cC-------CCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 54 2578999999999999999999884
No 11
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.93 E-value=1.3e-25 Score=228.56 Aligned_cols=243 Identities=18% Similarity=0.244 Sum_probs=167.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCe--EEEEcCCCCcccc--cchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYD--AVCISPRNHMVFT--PLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~--Vtvie~~~~~~~~--~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
+++|+|||||+||+++|..|++.|++ |+|||+++++.|. ++......|....+.+ ...... +. ..+++++.
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~---~~-~~~i~~~~ 76 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADW---YG-EARIDMLT 76 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTH---HH-HTTCEEEE
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHH---HH-HCCCEEEe
Confidence 45899999999999999999999887 9999999988775 3334455555544443 222222 22 24788888
Q ss_pred E-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHH--Hh
Q 013546 185 A-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLL--LN 260 (441)
Q Consensus 185 ~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~--~~ 260 (441)
+ +++.++.+.+.+.+.++ .++.||+||||||+.|+.|++||.+ ++++.+++.+++..++..+. ..
T Consensus 77 ~~~v~~id~~~~~v~~~~g-----------~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~ 145 (410)
T 3ef6_A 77 GPEVTALDVQTRTISLDDG-----------TTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATR 145 (410)
T ss_dssp SCCEEEEETTTTEEEETTS-----------CEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCE
T ss_pred CCEEEEEECCCCEEEECCC-----------CEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCe
Confidence 7 89999999988877542 3789999999999999999999986 67888999999988876441 11
Q ss_pred cccccCCCCceeEeeC-----ceEEE------------------------------------------------------
Q 013546 261 LMLSENPGDTVQLFSK-----YFVIT------------------------------------------------------ 281 (441)
Q Consensus 261 ~~~a~~~G~~~vE~a~-----~v~V~------------------------------------------------------ 281 (441)
+.+.+ +|..++|+|. ..+|+
T Consensus 146 vvViG-gG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~d 224 (410)
T 3ef6_A 146 LLIVG-GGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASD 224 (410)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETT
T ss_pred EEEEC-CCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECC
Confidence 22222 3333333320 00010
Q ss_pred ---------Ec-----cC--------CcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHH
Q 013546 282 ---------IT-----LS--------FLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYL 339 (441)
Q Consensus 282 ---------il-----~~--------~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~a 339 (441)
++ +. +..+ +.|.||+++|| +.|+|||+|||+..++..|.+..++++..|+.||+.+
T Consensus 225 g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t-~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~a 302 (410)
T 3ef6_A 225 GRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGAT-LAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAV 302 (410)
T ss_dssp SCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBC-SSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHH
T ss_pred CCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeE-CCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHH
Confidence 00 00 0001 45999999999 9999999999998765444444567899999999999
Q ss_pred HHHHHHHhccccCCCcccccCCCCCCCceeecc-e-eEEEecCCc
Q 013546 340 AELFNKKIGEQDGGKALSAKDINLGDPFVYKHL-G-SMATVGRYK 382 (441)
Q Consensus 340 A~nI~~~l~~~~~g~~~~~~~~~~~~~f~~~~~-g-~~~~lG~~~ 382 (441)
|+||. |+. .+++. .||.+.+. + .+.++|...
T Consensus 303 a~~i~--------g~~---~~~~~-~p~~~~~~~~~~~~~~G~~~ 335 (410)
T 3ef6_A 303 AAAIL--------GKN---VSAPQ-LPVSWTEIAGHRMQMAGDIE 335 (410)
T ss_dssp HHHHT--------TCC---CCCCB-CCEEEEEETTEEEEEESCSS
T ss_pred HHHHc--------CCC---CCCCC-CCeeEEEECCceEEEEcCCC
Confidence 99997 321 11232 56666543 3 456677543
No 12
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=4.6e-25 Score=221.36 Aligned_cols=211 Identities=24% Similarity=0.335 Sum_probs=151.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc-cchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-E
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT-PLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-S 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~-~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 186 (441)
+.+|+||||||||+++|..|++.| +|+|||+++...|. ++++....|..+.+.+.....+. +. ..+++++.+ +
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~---~~-~~~v~~~~g~~ 82 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDW---YR-KRGIEIRLAEE 82 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHH---HH-HHTEEEECSCC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHH---HH-hCCcEEEECCE
Confidence 569999999999999999999999 99999999876554 66666665655554444433333 22 247888877 6
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHH--Hhcccc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLL--LNLMLS 264 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~--~~~~~a 264 (441)
|+.+|.+.+.|. .++ .++.||+||||||++|+.|++|| .++++.+++.+++.++++.+. ..+.+.
T Consensus 83 v~~id~~~~~V~-~~g-----------~~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~~~~~vvVi 149 (367)
T 1xhc_A 83 AKLIDRGRKVVI-TEK-----------GEVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIENSGEAIII 149 (367)
T ss_dssp EEEEETTTTEEE-ESS-----------CEEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHHHHSEEEEE
T ss_pred EEEEECCCCEEE-ECC-----------cEEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhhcCCcEEEE
Confidence 999999888876 332 37899999999999999999999 567888889999988876542 223333
Q ss_pred cCCCCceeEeeC-----ceEEEEc-------c-------------------------------------C--CcccC---
Q 013546 265 ENPGDTVQLFSK-----YFVITIT-------L-------------------------------------S--FLVRL--- 290 (441)
Q Consensus 265 ~~~G~~~vE~a~-----~v~V~il-------~-------------------------------------~--~~~~l--- 290 (441)
+ +|..|+|+|. +.+|+++ + . ++.+.
T Consensus 150 G-gG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~i~~D~vi~ 228 (367)
T 1xhc_A 150 G-GGFIGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGFIEGKVKIC 228 (367)
T ss_dssp E-CSHHHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEEEECSCEEE
T ss_pred C-CCHHHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCEEEcCEEEE
Confidence 3 4555544441 1111100 0 0 00000
Q ss_pred -------------------CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 -------------------SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 -------------------G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
+.|.||+++|| +.|+|||+|||+... + ..++++..|++||+.+|+||.
T Consensus 229 a~G~~p~~~ll~~~gl~~~~gi~Vd~~~~t-~~~~IyA~GD~a~~~---~--~~~~~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 229 AIGIVPNVDLARRSGIHTGRGILIDDNFRT-SAKDVYAIGDCAEYS---G--IIAGTAKAAMEQARVLADILK 295 (367)
T ss_dssp ECCEEECCHHHHHTTCCBSSSEECCTTSBC-SSTTEEECGGGEEBT---T--BCCCSHHHHHHHHHHHHHHHT
T ss_pred CcCCCcCHHHHHhCCCCCCCCEEECCCccc-CCCCEEEeEeeeecC---C--CCccHHHHHHHHHHHHHHHhc
Confidence 45999999999 999999999999652 1 235789999999999999997
No 13
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.93 E-value=4.6e-25 Score=224.67 Aligned_cols=245 Identities=20% Similarity=0.290 Sum_probs=166.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCe--EEEEcCCCCcccc--cchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYD--AVCISPRNHMVFT--PLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~--Vtvie~~~~~~~~--~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
+++|+|||||+||+++|..|++.|++ |||||+++++.|. ++......+......+....... + ...++.++.
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~---~-~~~~i~~~~ 84 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQF---W-EDKAVEMKL 84 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHH---H-HHTTEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHH---H-HHCCcEEEe
Confidence 56899999999999999999999987 9999999987765 23223343433333333322222 2 235788888
Q ss_pred E-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHHH---
Q 013546 185 A-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLLL--- 259 (441)
Q Consensus 185 ~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~~--- 259 (441)
+ +++.++.+.+.+.+.++ ..+.||+||||||+.|+.|++||.+ ++++.+++.+++..+...+..
T Consensus 85 ~~~v~~id~~~~~v~~~~g-----------~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~ 153 (415)
T 3lxd_A 85 GAEVVSLDPAAHTVKLGDG-----------SAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAK 153 (415)
T ss_dssp TCCEEEEETTTTEEEETTS-----------CEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEECCCCEEEECCC-----------CEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCC
Confidence 7 89999999998877542 3789999999999999999999986 678889999999888776532
Q ss_pred hcccccCCCCceeEeeC--------------------------------------ceE-------------------EE-
Q 013546 260 NLMLSENPGDTVQLFSK--------------------------------------YFV-------------------IT- 281 (441)
Q Consensus 260 ~~~~a~~~G~~~vE~a~--------------------------------------~v~-------------------V~- 281 (441)
.+.+.+ +|..++|+|. +++ |.
T Consensus 154 ~vvViG-gG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l 232 (415)
T 3lxd_A 154 NAVVIG-GGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRM 232 (415)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEE
T ss_pred eEEEEC-CCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEe
Confidence 112222 2333322220 000 10
Q ss_pred -----------Ecc-CCccc----------C-CceeeCCCcccCCCCCEEEeccccccccc-C-CCCCCCchHHHHHHHH
Q 013546 282 -----------ITL-SFLVR----------L-SQIGVDEWLRAPSVEDVFALGDCAGFLEQ-T-GKPVLPALAQVAERQG 336 (441)
Q Consensus 282 -----------il~-~~~~~----------l-G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~-G~~~~p~~a~~A~~qg 336 (441)
++. +..+. . +.|.||+++|| +.|+|||+|||+..+.+ . |.+..+.++..|..||
T Consensus 233 ~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~gi~vd~~~~t-~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg 311 (415)
T 3lxd_A 233 QDGSVIPADIVIVGIGIVPCVGALISAGASGGNGVDVDEFCRT-SLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMA 311 (415)
T ss_dssp SSSCEEECSEEEECSCCEESCHHHHHTTCCCSSSEECCTTCBC-SSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHH
T ss_pred CCCCEEEcCEEEECCCCccChHHHHhCCCCcCCCEEECCCCCc-CCCCEEEEEeeeeecCcccCCcceeechHHHHHHHH
Confidence 100 00000 0 45999999999 99999999999987652 2 5555667899999999
Q ss_pred HHHHHHHHHHhccccCCCcccccCCCCCCCceeecc-e-eEEEecCCc
Q 013546 337 KYLAELFNKKIGEQDGGKALSAKDINLGDPFVYKHL-G-SMATVGRYK 382 (441)
Q Consensus 337 ~~aA~nI~~~l~~~~~g~~~~~~~~~~~~~f~~~~~-g-~~~~lG~~~ 382 (441)
+.+|+||. |+. ..++ ..||.+.+. + .+.++|...
T Consensus 312 ~~aa~~i~--------g~~---~~~~-~~p~~~~~~~~~~~~~~G~~~ 347 (415)
T 3lxd_A 312 TAAAKDIC--------GAP---VPYK-ATPWFWSNQYDLKLQTVGLST 347 (415)
T ss_dssp HHHHHHHT--------TCC---CCCC-CCCEEEEEETTEEEEEEECCT
T ss_pred HHHHHHhc--------CCC---CCCC-CCCeeEeeeCCcEEEEEeCCC
Confidence 99999997 321 0123 267766543 3 466777543
No 14
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.92 E-value=4.6e-25 Score=215.54 Aligned_cols=213 Identities=15% Similarity=0.084 Sum_probs=123.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhc-CCCCccccc-cch-hhhhhhhcCCCCEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCV-GTLEFRSVA-EPV-SRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~-g~~~~~~~~-~~~-~~~~~~~~~~~~v~~~~~ 185 (441)
..+|+||||||||++||.+|++.|++|+|||+... + ..+++..+. ..+.+..+. ..+ ........+. ...+...
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~-g-G~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 82 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-G-GQMANTEEVENFPGFEMITGPDLSTKMFEHAKKF-GAVYQYG 82 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-T-GGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHT-TCEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-C-CeeecccccCCcCCccccchHHHHHHHHHHHhhc-cccccce
Confidence 46899999999999999999999999999998642 2 122221111 111111110 011 1111112222 2333333
Q ss_pred -EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccc---cccccCHhHHHHHHHHHHHhc
Q 013546 186 -SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKEN---AYFLREVNHAQEIRKKLLLNL 261 (441)
Q Consensus 186 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~---~~~l~~~~~a~~~~~~i~~~~ 261 (441)
.+...+.....+...+ ..++.||+||||||++|+.|++||.++. ........+...+. .+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~-----------~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~---~k~v 148 (312)
T 4gcm_A 83 DIKSVEDKGEYKVINFG-----------NKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFK---NKRL 148 (312)
T ss_dssp CCCEEEECSSCEEEECS-----------SCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGT---TCEE
T ss_pred eeeeeeeeecceeeccC-----------CeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccC---CCEE
Confidence 3333343333332222 1478999999999999999999997531 11111111111111 0122
Q ss_pred ccccCCCCceeEeeC-----ceEEEEccC---------------------------------------------------
Q 013546 262 MLSENPGDTVQLFSK-----YFVITITLS--------------------------------------------------- 285 (441)
Q Consensus 262 ~~a~~~G~~~vE~a~-----~v~V~il~~--------------------------------------------------- 285 (441)
.+.+ +|..++|+|. ..+|+++..
T Consensus 149 vViG-gG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (312)
T 4gcm_A 149 FVIG-GGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSE 227 (312)
T ss_dssp EEEC-CSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEC-CCHHHHHHHHHHHhcCCEEEEEecccccCcchhHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCce
Confidence 2333 4555655541 111211100
Q ss_pred -----------Cc--------------ccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHH
Q 013546 286 -----------FL--------------VRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLA 340 (441)
Q Consensus 286 -----------~~--------------~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA 340 (441)
.+ .+-|+|.||++||| |.|+|||+|||+. ..+++++.|+.||+.||
T Consensus 228 ~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~T-s~pgIyA~GDv~~--------~~~~~~~~A~~~G~~AA 298 (312)
T 4gcm_A 228 ETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTT-SVPGIFAAGDVRD--------KGLRQIVTATGDGSIAA 298 (312)
T ss_dssp EEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBC-SSTTEEECSTTBS--------CSCCSHHHHHHHHHHHH
T ss_pred eEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCcc-CCCCEEEEeecCC--------CcchHHHHHHHHHHHHH
Confidence 00 00088999999999 9999999999982 23578999999999999
Q ss_pred HHHHHHhc
Q 013546 341 ELFNKKIG 348 (441)
Q Consensus 341 ~nI~~~l~ 348 (441)
.||.++|+
T Consensus 299 ~~i~~~L~ 306 (312)
T 4gcm_A 299 QSAAEYIE 306 (312)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999986
No 15
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.92 E-value=2.8e-24 Score=218.22 Aligned_cols=242 Identities=19% Similarity=0.293 Sum_probs=163.4
Q ss_pred CcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCCCcccc-c-chhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRNHMVFT-P-LLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~~~~~~-~-ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (441)
++|+|||||+||+++|..|++.|+ +|||||++++..|. + +......+......+....... +. ..++.++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~---~~-~~~i~~~~~ 77 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKF---FQ-DQAIELISD 77 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHH---HH-HTTEEEECC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHH---HH-hCCCEEEEE
Confidence 589999999999999999999998 89999999977765 2 3323444443333333333332 22 247788778
Q ss_pred EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHHHh--cc
Q 013546 186 SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLLLN--LM 262 (441)
Q Consensus 186 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~~~--~~ 262 (441)
+++.++.+.+.+.+.++ .++.||+||+|||++|+.|++||.+ ++++.+++.+++..+...+... +.
T Consensus 78 ~v~~id~~~~~v~~~~g-----------~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vv 146 (404)
T 3fg2_P 78 RMVSIDREGRKLLLASG-----------TAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVV 146 (404)
T ss_dssp CEEEEETTTTEEEESSS-----------CEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEE
T ss_pred EEEEEECCCCEEEECCC-----------CEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEE
Confidence 99999999998877653 3789999999999999999999976 6788889999988887654211 11
Q ss_pred cccCCCCceeEeeC--------------------------------------ceE-------------------EE----
Q 013546 263 LSENPGDTVQLFSK--------------------------------------YFV-------------------IT---- 281 (441)
Q Consensus 263 ~a~~~G~~~vE~a~--------------------------------------~v~-------------------V~---- 281 (441)
+.+ +|..++|+|. +++ |.
T Consensus 147 ViG-gG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG 225 (404)
T 3fg2_P 147 VIG-AGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDG 225 (404)
T ss_dssp EEC-CSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTS
T ss_pred EEC-CCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCC
Confidence 111 2222222210 000 10
Q ss_pred --------Ec-----cC--------CcccCCceeeCCCcccCCCCCEEEeccccccccc-CCCCCCCchHHHHHHHHHHH
Q 013546 282 --------IT-----LS--------FLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPVLPALAQVAERQGKYL 339 (441)
Q Consensus 282 --------il-----~~--------~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~~p~~a~~A~~qg~~a 339 (441)
++ +. +..+ +.|.||+++|| +.|+|||+|||+..+.+ .|.+..+.++..|+.||+.+
T Consensus 226 ~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~Gi~vd~~~~t-~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~a 303 (404)
T 3fg2_P 226 NTLPCDLVVVGVGVIPNVEIAAAAGLPTA-AGIIVDQQLLT-SDPHISAIGDCALFESVRFGETMRVESVQNATDQARCV 303 (404)
T ss_dssp CEEECSEEEECCCEEECCHHHHHTTCCBS-SSEEECTTSBC-SSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHH
T ss_pred CEEEcCEEEECcCCccCHHHHHhCCCCCC-CCEEECCCccc-CCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHH
Confidence 00 00 0001 44999999999 99999999999987642 24334566799999999999
Q ss_pred HHHHHHHhccccCCCcccccCCCCCCCceeecc-e-eEEEecCC
Q 013546 340 AELFNKKIGEQDGGKALSAKDINLGDPFVYKHL-G-SMATVGRY 381 (441)
Q Consensus 340 A~nI~~~l~~~~~g~~~~~~~~~~~~~f~~~~~-g-~~~~lG~~ 381 (441)
|+||. |+. ..++ ..||.+.+. + .+.++|..
T Consensus 304 a~~i~--------g~~---~~~~-~~p~~~~~~~~~~~~~~G~~ 335 (404)
T 3fg2_P 304 AARLT--------GDA---KPYD-GYPWFWSDQGDDKLQIVGLT 335 (404)
T ss_dssp HHHTT--------TCC---CCCC-CCCEEEEEETTEEEEEEECC
T ss_pred HHHhC--------CCC---CCCC-CCCceEeEECCcEEEEEeCC
Confidence 99997 321 1123 267766543 2 45666654
No 16
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.92 E-value=4.8e-25 Score=226.86 Aligned_cols=221 Identities=21% Similarity=0.219 Sum_probs=141.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccc-hhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPL-LASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~l-l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (441)
+++|+|||||+||+++|..|++. |++|+|||+++++.+.++ ++....+....+.......+ .+.+..++.++.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~gi~v~~~ 79 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPE---VFIKKRGIDLHLN 79 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------C---THHHHTTCEEETT
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHH---HHHHhcCcEEEec
Confidence 57999999999999999999986 899999999998776553 33333332222221111111 1222346777776
Q ss_pred -EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHH----H
Q 013546 186 -SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLL----L 259 (441)
Q Consensus 186 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~----~ 259 (441)
+|+.++.+...+...+ ++.++.||+||||||++|+.|++||.+ ++++..++.+++..+.+.+. .
T Consensus 80 ~~v~~i~~~~~~v~~~~----------g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 149 (449)
T 3kd9_A 80 AEVIEVDTGYVRVRENG----------GEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVE 149 (449)
T ss_dssp CEEEEECSSEEEEECSS----------SEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCC
T ss_pred CEEEEEecCCCEEEECC----------ceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCC
Confidence 8999987765554321 123789999999999999999999986 56777888888887776542 1
Q ss_pred hcccccCCCCceeEeeC-----ceEEE-----------------------------------------------------
Q 013546 260 NLMLSENPGDTVQLFSK-----YFVIT----------------------------------------------------- 281 (441)
Q Consensus 260 ~~~~a~~~G~~~vE~a~-----~v~V~----------------------------------------------------- 281 (441)
.+.+.+ +|..++|+|. ..+|+
T Consensus 150 ~vvViG-gG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~v~i~~~~~v~~i~~~~~v~~v~~~g 228 (449)
T 3kd9_A 150 NVVIIG-GGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKHVNLRLQEITMKIEGEERVEKVVTDA 228 (449)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTTSEEEESCCEEEEECSSSCCEEEETT
T ss_pred eEEEEC-CCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCcEEEeCCeEEEEeccCcEEEEEeCC
Confidence 222222 3444433330 00111
Q ss_pred --------Ec-----cC------CcccC---CceeeCCCcccCCCCCEEEeccccccccc-CCCCCCCchHHHHHHHHHH
Q 013546 282 --------IT-----LS------FLVRL---SQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPVLPALAQVAERQGKY 338 (441)
Q Consensus 282 --------il-----~~------~~~~l---G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~~p~~a~~A~~qg~~ 338 (441)
++ |. .+.++ |+|.||+++|| +.|+|||+|||+..++. .|.+..++++..|.+||+.
T Consensus 229 ~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~ 307 (449)
T 3kd9_A 229 GEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQT-SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYV 307 (449)
T ss_dssp EEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBC-SSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHH
T ss_pred CEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCcc-CCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHH
Confidence 00 00 00000 78999999999 99999999999976553 3544467899999999999
Q ss_pred HHHHHH
Q 013546 339 LAELFN 344 (441)
Q Consensus 339 aA~nI~ 344 (441)
+|+||.
T Consensus 308 aa~~i~ 313 (449)
T 3kd9_A 308 AGSNIA 313 (449)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999987
No 17
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.91 E-value=7.9e-25 Score=226.64 Aligned_cols=228 Identities=19% Similarity=0.201 Sum_probs=136.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccc-hhhhhcCCCCcc-cccc---chhhhhhhhcCCCCEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPL-LASTCVGTLEFR-SVAE---PVSRIQTSLSSDPNSY 181 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~l-l~~~~~g~~~~~-~~~~---~~~~~~~~~~~~~~v~ 181 (441)
+++|+|||||++|+++|..|++. |++|||||+++++.|.++ ++....+..... .... .+.+..+.+.+..++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 56999999999999999999987 899999999998877643 343343332211 1100 0111112133334666
Q ss_pred EE-EEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHH-
Q 013546 182 FY-LASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLL- 258 (441)
Q Consensus 182 ~~-~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~- 258 (441)
+. ..+|+.++.+.+.+.+.+..+ ++...+.||+||||||++|..|++||.+ ++++.+.+..++..+...+.
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~------g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~ 156 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRT------GERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA 156 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTT------CCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCT
T ss_pred EEECCEEEEEECCCCEEEEeecCC------CCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhc
Confidence 64 468999999999998876322 1224789999999999999999999985 66777888888877764321
Q ss_pred ---HhcccccCCCCceeEee---------------------------------------------------------Cce
Q 013546 259 ---LNLMLSENPGDTVQLFS---------------------------------------------------------KYF 278 (441)
Q Consensus 259 ---~~~~~a~~~G~~~vE~a---------------------------------------------------------~~v 278 (441)
..+.+.+ +|..++|+| +.+
T Consensus 157 ~~~~~vvViG-gG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v 235 (472)
T 3iwa_A 157 GEVSKAVIVG-GGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKV 235 (472)
T ss_dssp TSCSEEEEEC-CSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeE
Confidence 0111111 122111111 001
Q ss_pred EEE------------Ec-----cCC------ccc---CCceeeCCCcccCCCCCEEEecccccccccC-CCCCCCchHHH
Q 013546 279 VIT------------IT-----LSF------LVR---LSQIGVDEWLRAPSVEDVFALGDCAGFLEQT-GKPVLPALAQV 331 (441)
Q Consensus 279 ~V~------------il-----~~~------~~~---lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~-G~~~~p~~a~~ 331 (441)
.+. ++ +.. +.+ -|+|.||+++|| +.|+|||+|||+.+++.. |.+..+++++.
T Consensus 236 ~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~ 314 (472)
T 3iwa_A 236 ARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSM 314 (472)
T ss_dssp EEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBTTTSSEECCCCTTH
T ss_pred EEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCccc-CCCCEEEeccceecccccCCceeecchHHH
Confidence 111 10 000 000 188999999999 999999999999876532 54446789999
Q ss_pred HHHHHHHHHHHHH
Q 013546 332 AERQGKYLAELFN 344 (441)
Q Consensus 332 A~~qg~~aA~nI~ 344 (441)
|++||+++|+||.
T Consensus 315 A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 315 ANRQGRVIGTNLA 327 (472)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999997
No 18
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.91 E-value=8.7e-24 Score=224.70 Aligned_cols=226 Identities=21% Similarity=0.293 Sum_probs=156.9
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccc-hhhhhcCCCCcc--ccccchhhhhhhhcCCCCEE
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPL-LASTCVGTLEFR--SVAEPVSRIQTSLSSDPNSY 181 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~l-l~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~v~ 181 (441)
+++++|+|||||+||+++|..|++. |++|+|||+++++.|.++ ++....+..... .+...+... .+..++.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~----~~~~gi~ 109 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERM----SKRFNLD 109 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHH----HHHTTCE
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHH----HHhcCcE
Confidence 4468999999999999999999987 899999999998887653 455555543321 122223332 2223566
Q ss_pred EE-EEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCc-c-cccccccCHhHHHHHHHHHH
Q 013546 182 FY-LASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGV-K-ENAYFLREVNHAQEIRKKLL 258 (441)
Q Consensus 182 ~~-~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~-~-~~~~~l~~~~~a~~~~~~i~ 258 (441)
+. ..+|+.++.+.+.+.+.+..+ ++..++.||+||||||++|+.|++||. + ++++..+++.++..+...+.
T Consensus 110 v~~~~~V~~id~~~~~v~v~~~~~------g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~ 183 (588)
T 3ics_A 110 IRVLSEVVKINKEEKTITIKNVTT------NETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYID 183 (588)
T ss_dssp EECSEEEEEEETTTTEEEEEETTT------CCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHH
T ss_pred EEECCEEEEEECCCCEEEEeecCC------CCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHh
Confidence 64 568999999999998876322 122468999999999999999999998 3 56778888888887766543
Q ss_pred H----hcccccCCCCceeEeeC-----ceEEE------------------------------------------------
Q 013546 259 L----NLMLSENPGDTVQLFSK-----YFVIT------------------------------------------------ 281 (441)
Q Consensus 259 ~----~~~~a~~~G~~~vE~a~-----~v~V~------------------------------------------------ 281 (441)
. .+.+.+ +|..++|+|. ..+|+
T Consensus 184 ~~~~~~vvViG-gG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~ 262 (588)
T 3ics_A 184 EKKPRHATVIG-GGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVR 262 (588)
T ss_dssp HHCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEE
T ss_pred hcCCCeEEEEC-CCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEE
Confidence 1 122222 3444433330 00111
Q ss_pred ------------Ec-----cC------CcccC---CceeeCCCcccCCCCCEEEeccccccccc-CCCCCCCchHHHHHH
Q 013546 282 ------------IT-----LS------FLVRL---SQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPVLPALAQVAER 334 (441)
Q Consensus 282 ------------il-----~~------~~~~l---G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~~p~~a~~A~~ 334 (441)
++ +. .+.++ |+|.||+++|| +.|+|||+|||+.+++. +|.+..++++..|..
T Consensus 263 ~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~ 341 (588)
T 3ics_A 263 LKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWPANR 341 (588)
T ss_dssp ETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHH
T ss_pred ECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCcccc-CCCCEEEeeeeeecccccCCcccccccHHHHHH
Confidence 00 00 00000 78999999999 99999999999976543 254446789999999
Q ss_pred HHHHHHHHHH
Q 013546 335 QGKYLAELFN 344 (441)
Q Consensus 335 qg~~aA~nI~ 344 (441)
||+++|+||.
T Consensus 342 ~g~~aa~~i~ 351 (588)
T 3ics_A 342 QGRMLADIIH 351 (588)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999997
No 19
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.91 E-value=1.7e-23 Score=217.17 Aligned_cols=225 Identities=18% Similarity=0.262 Sum_probs=150.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccc-hhhhhcCCCC-ccccccchhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPL-LASTCVGTLE-FRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~l-l~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
+++|+|||||+||+++|..|++. |++|+|||+++...|.++ ++....+... .+.+.....+. +.+..++.++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~gv~~~~ 112 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKT---FRDKYGIDAKV 112 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHH---HHHTTCCEEES
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHH---HHhhcCCEEEe
Confidence 46899999999999999999985 899999999988766654 4444333322 22222222222 32334677766
Q ss_pred -EEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHH----
Q 013546 185 -ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLL---- 258 (441)
Q Consensus 185 -~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~---- 258 (441)
..|+.++.+.+.+.+.+..+ ++..++.||+||||||+.|+.|++||.+ ++++.+++.+++.++.+.+.
T Consensus 113 ~~~v~~i~~~~~~v~v~~~~~------g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~ 186 (480)
T 3cgb_A 113 RHEVTKVDTEKKIVYAEHTKT------KDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKV 186 (480)
T ss_dssp SEEEEEEETTTTEEEEEETTT------CCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCC
T ss_pred CCEEEEEECCCCEEEEEEcCC------CceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCC
Confidence 58899999889888875211 1123689999999999999999999986 56777888898887776542
Q ss_pred HhcccccCCCCceeEee------------------------------------------------------Cce-EEE--
Q 013546 259 LNLMLSENPGDTVQLFS------------------------------------------------------KYF-VIT-- 281 (441)
Q Consensus 259 ~~~~~a~~~G~~~vE~a------------------------------------------------------~~v-~V~-- 281 (441)
..+.+.+ +|..++|+| +.+ .+.
T Consensus 187 ~~vvViG-gG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~ 265 (480)
T 3cgb_A 187 EDVTIIG-GGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD 265 (480)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET
T ss_pred CeEEEEC-CCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC
Confidence 1111111 122221111 001 010
Q ss_pred ---------E-----------ccCCcccC---CceeeCCCcccCCCCCEEEeccccccccc-CCCCCCCchHHHHHHHHH
Q 013546 282 ---------I-----------TLSFLVRL---SQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPVLPALAQVAERQGK 337 (441)
Q Consensus 282 ---------i-----------l~~~~~~l---G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~~p~~a~~A~~qg~ 337 (441)
+ +...+.++ |+|.||+++|| +.|+|||+|||+..++. .|++..++++..|.+||+
T Consensus 266 ~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~ 344 (480)
T 3cgb_A 266 KGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGR 344 (480)
T ss_dssp TEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHH
T ss_pred CCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccC-CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHH
Confidence 1 01111111 78999999999 89999999999976542 243334678999999999
Q ss_pred HHHHHHH
Q 013546 338 YLAELFN 344 (441)
Q Consensus 338 ~aA~nI~ 344 (441)
++|+||.
T Consensus 345 ~aa~~i~ 351 (480)
T 3cgb_A 345 LAGLNML 351 (480)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999997
No 20
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.91 E-value=1.5e-23 Score=221.67 Aligned_cols=223 Identities=18% Similarity=0.234 Sum_probs=153.8
Q ss_pred CcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccc-hhhhhcCCCCc-cc-cccchhhhhhhhcCCCCEEEE-
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPL-LASTCVGTLEF-RS-VAEPVSRIQTSLSSDPNSYFY- 183 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~l-l~~~~~g~~~~-~~-~~~~~~~~~~~~~~~~~v~~~- 183 (441)
++|+|||||+||+++|..|++. +++|||||+++++.|.++ ++....+.... .. ....... +.+..++.+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~ 77 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPES----FKARFNVEVRV 77 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHH----HHHHHCCEEET
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHH----HHHhcCcEEEE
Confidence 5899999999999999999986 899999999998877653 44444443322 11 1122222 2222356664
Q ss_pred EEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHHH---
Q 013546 184 LASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLLL--- 259 (441)
Q Consensus 184 ~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~~--- 259 (441)
..+|++++.+.+.+.+.+..+ ++..++.||+||||||++|+.|++||.+ .+++.++++.++..+.+.+..
T Consensus 78 ~~~V~~id~~~~~v~~~~~~~------g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~ 151 (565)
T 3ntd_A 78 KHEVVAIDRAAKLVTVRRLLD------GSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNV 151 (565)
T ss_dssp TEEEEEEETTTTEEEEEETTT------CCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEECCCCEEEEEecCC------CCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCC
Confidence 578999999999998876322 1224789999999999999999999985 677788888888777654421
Q ss_pred -hcccccCCCCceeEeeC-------------------------------------ceE----------------------
Q 013546 260 -NLMLSENPGDTVQLFSK-------------------------------------YFV---------------------- 279 (441)
Q Consensus 260 -~~~~a~~~G~~~vE~a~-------------------------------------~v~---------------------- 279 (441)
.+.+.+ +|..++|+|. +++
T Consensus 152 ~~vvViG-gG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~ 230 (565)
T 3ntd_A 152 EHATVVG-GGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDA 230 (565)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGG
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccc
Confidence 122222 3333333220 000
Q ss_pred ---------------EE-----------Ec------cCC------ccc---CCceeeCCCcccCCCCCEEEecccccccc
Q 013546 280 ---------------IT-----------IT------LSF------LVR---LSQIGVDEWLRAPSVEDVFALGDCAGFLE 318 (441)
Q Consensus 280 ---------------V~-----------il------~~~------~~~---lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~ 318 (441)
++ ++ +.. +.. -|+|.||+++|| +.|+|||+|||+.+++
T Consensus 231 ~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~ 309 (565)
T 3ntd_A 231 AGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQT-SDPAIYAVGDAVEEQD 309 (565)
T ss_dssp GTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBC-SSTTEEECGGGBCEEB
T ss_pred cccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCccc-CCCCEEEeeeeEeecc
Confidence 10 00 000 000 078999999999 9999999999997765
Q ss_pred c-CCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 319 Q-TGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 319 ~-~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
. .|....+++++.|++||+++|+||.
T Consensus 310 ~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 310 FVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp TTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCceeecccHHHHHHHHHHHHHHhc
Confidence 3 3544467899999999999999997
No 21
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.90 E-value=1.3e-23 Score=218.75 Aligned_cols=221 Identities=22% Similarity=0.245 Sum_probs=148.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC---CeEEEEcCCCCcccccc-hhhhhcCC-CCccccccchhhhhhhhcCCCCEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI---YDAVCISPRNHMVFTPL-LASTCVGT-LEFRSVAEPVSRIQTSLSSDPNSYFY 183 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g---~~Vtvie~~~~~~~~~l-l~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~v~~~ 183 (441)
.++|+|||||+||+++|..|++.| ++|+|||+++++.|.++ ++....+. ...+.+....... +. ..++.++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~gv~v~ 110 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEE---LE-SLGAKVY 110 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHH---HH-HTTCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHH---HH-hCCCEEE
Confidence 479999999999999999999887 99999999987766554 23223333 2223333333332 22 2356664
Q ss_pred -EEEEEEEeCCCCEEEEE-ecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc------------cccccccCHhH
Q 013546 184 -LASCIGIDTDKHEVYCE-TVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK------------ENAYFLREVNH 249 (441)
Q Consensus 184 -~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~------------~~~~~l~~~~~ 249 (441)
..+++.++.+.+.+.+. ++ +..++.||+||||||++|+.|++||.+ ++++.++++.+
T Consensus 111 ~~~~v~~i~~~~~~v~v~~~g---------~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~ 181 (490)
T 2bc0_A 111 MESPVQSIDYDAKTVTALVDG---------KNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQN 181 (490)
T ss_dssp TTCCEEEEETTTTEEEEEETT---------EEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHH
T ss_pred eCCEEEEEECCCCEEEEEeCC---------cEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHH
Confidence 44689999988888876 31 113689999999999999999999975 46777888888
Q ss_pred HHHHHHHH--H--HhcccccCCCCceeEeeC--------------------------------------ceE--------
Q 013546 250 AQEIRKKL--L--LNLMLSENPGDTVQLFSK--------------------------------------YFV-------- 279 (441)
Q Consensus 250 a~~~~~~i--~--~~~~~a~~~G~~~vE~a~--------------------------------------~v~-------- 279 (441)
+.++.+.+ . ..+.+.+ +|..|+|+|. +++
T Consensus 182 ~~~~~~~~~~~~~~~vvVIG-gG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 260 (490)
T 2bc0_A 182 SADVIAKLENKDIKRVAVVG-AGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVK 260 (490)
T ss_dssp HHHHHHHTTSTTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEE
T ss_pred HHHHHHHhhhcCCceEEEEC-CCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEE
Confidence 88776554 1 1122222 3333333320 000
Q ss_pred ----------EE-----------Ec-----cCCc-----cc---CCceeeCCCcccCCCCCEEEeccccccccc-CCCCC
Q 013546 280 ----------IT-----------IT-----LSFL-----VR---LSQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPV 324 (441)
Q Consensus 280 ----------V~-----------il-----~~~~-----~~---lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~ 324 (441)
|. ++ |..+ .. -|+|.||+++|| +.|+|||+|||+..++. .|+..
T Consensus 261 ~i~~~~~v~~v~~~g~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~ 339 (490)
T 2bc0_A 261 EVAGNGKVEKIITDKNEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLVNKRQET-SIPGVYAIGDCATIYDNATRDTN 339 (490)
T ss_dssp EEECSSSCCEEEESSCEEECSEEEECCCEEECCGGGTTCSCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEETTTTEEE
T ss_pred EEEcCCcEEEEEECCcEEECCEEEECCCCCcChHHHHhhhccCCCCCEEECCCccc-CCCCEEEeeeeEEeccccCCcee
Confidence 10 00 0000 00 178999999999 99999999999976432 23333
Q ss_pred CCchHHHHHHHHHHHHHHHH
Q 013546 325 LPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 325 ~p~~a~~A~~qg~~aA~nI~ 344 (441)
.++++..|.+||+++|+||.
T Consensus 340 ~~~~~~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 340 YIALASNAVRTGIVAAHNAC 359 (490)
T ss_dssp CCCCHHHHHHHHHHHHHHHT
T ss_pred ecccHHHHHHHHHHHHHHhc
Confidence 56899999999999999997
No 22
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.90 E-value=2.4e-23 Score=211.69 Aligned_cols=214 Identities=21% Similarity=0.266 Sum_probs=145.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCCCcccc-cch-hhhhcCCCCccccccchhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRNHMVFT-PLL-ASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~~~~~~-~ll-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
.++|+|||||++|+++|..|++.|+ +|+|||+++++.|. +.+ .....+.. .+.. .++ . + +..+++++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~---~-~~~~v~~~~ 78 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKI--RLD-C---K-RAPEVEWLL 78 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGS--BCC-C---T-TSCSCEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhh--hHH-H---H-HHCCCEEEc
Confidence 5689999999999999999999887 59999999877664 222 22332222 1111 111 1 2 235788888
Q ss_pred EE-EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCC-CCcccccccccCHhHHHHHHHHHH--Hh
Q 013546 185 AS-CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGI-KGVKENAYFLREVNHAQEIRKKLL--LN 260 (441)
Q Consensus 185 ~~-v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~i-pG~~~~~~~l~~~~~a~~~~~~i~--~~ 260 (441)
+. |+.++.+.+.|.+.++ .++.||+||+|||++|+.|++ ||.+++++.+++.+++.++++.+. ..
T Consensus 79 ~~~v~~i~~~~~~v~~~~g-----------~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~ 147 (408)
T 2gqw_A 79 GVTAQSFDPQAHTVALSDG-----------RTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSR 147 (408)
T ss_dssp TCCEEEEETTTTEEEETTS-----------CEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCE
T ss_pred CCEEEEEECCCCEEEECCC-----------CEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhcCCe
Confidence 74 9999998888876542 378999999999999999999 998767778889999887765421 11
Q ss_pred cccccCCCCceeEeeC-----ceEEE------------------------------------------------------
Q 013546 261 LMLSENPGDTVQLFSK-----YFVIT------------------------------------------------------ 281 (441)
Q Consensus 261 ~~~a~~~G~~~vE~a~-----~v~V~------------------------------------------------------ 281 (441)
+.+.+ +|..|+|+|. +.+|+
T Consensus 148 vvViG-gG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i 226 (408)
T 2gqw_A 148 LLIVG-GGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRI 226 (408)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCEE
T ss_pred EEEEC-CCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCEE
Confidence 22222 3333333320 00111
Q ss_pred -----Ec-----cC--------CcccCCceeeCCCcccCCCCCEEEeccccccccc-CCCCCCCchHHHHHHHHHHHHHH
Q 013546 282 -----IT-----LS--------FLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPVLPALAQVAERQGKYLAEL 342 (441)
Q Consensus 282 -----il-----~~--------~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~~p~~a~~A~~qg~~aA~n 342 (441)
++ +. +..+ +.|.||+++|| +.|+|||+|||+..+.+ .|....++++..|++||+.+|+|
T Consensus 227 ~~D~vi~a~G~~p~~~l~~~~gl~~~-~gi~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~ 304 (408)
T 2gqw_A 227 AADMVVVGIGVLANDALARAAGLACD-DGIFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARH 304 (408)
T ss_dssp ECSEEEECSCEEECCHHHHHHTCCBS-SSEECCTTCBC-SSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHH
T ss_pred EcCEEEECcCCCccHHHHHhCCCCCC-CCEEECCCCcc-CCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHH
Confidence 00 00 0000 34999999999 99999999999976532 13322356899999999999999
Q ss_pred HH
Q 013546 343 FN 344 (441)
Q Consensus 343 I~ 344 (441)
|.
T Consensus 305 i~ 306 (408)
T 2gqw_A 305 LV 306 (408)
T ss_dssp HH
T ss_pred hc
Confidence 98
No 23
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.90 E-value=6.8e-24 Score=206.80 Aligned_cols=220 Identities=17% Similarity=0.043 Sum_probs=127.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCccc--ccchhhhh-----cCCCCccccccchhhhhhhhcCCCCEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVF--TPLLASTC-----VGTLEFRSVAEPVSRIQTSLSSDPNSY 181 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~--~~ll~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~v~ 181 (441)
.++|+||||||||++||.+|++.|++|+|||+...... .++++... .+..+.-.-.....+... ..+..+..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~-~~~~~~~~ 82 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRT-QSEKYGTT 82 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHH-HHHHTTCE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHH-HHhhcCcE
Confidence 56899999999999999999999999999998763221 12221110 011110000000111111 12224556
Q ss_pred EEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccc-cccccCHhHHHHHHHHH-HH
Q 013546 182 FYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKEN-AYFLREVNHAQEIRKKL-LL 259 (441)
Q Consensus 182 ~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~-~~~l~~~~~a~~~~~~i-~~ 259 (441)
+....+..+....+.......+ ..++.||+||||||++|+.|++||.+.. ...+............. ..
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEE---------GKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNK 153 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETT---------CCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTS
T ss_pred EEEeEEEEeecCCCceEEEECC---------CeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCC
Confidence 6666677776665544443321 2478999999999999999999997521 11222222111111000 01
Q ss_pred hcccccCCCCceeEeeC-----ceEEE-----------------------------------------------------
Q 013546 260 NLMLSENPGDTVQLFSK-----YFVIT----------------------------------------------------- 281 (441)
Q Consensus 260 ~~~~a~~~G~~~vE~a~-----~v~V~----------------------------------------------------- 281 (441)
.+.+.+ +|..++|+|. ..+|+
T Consensus 154 ~vvViG-gG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 232 (314)
T 4a5l_A 154 VLMVVG-GGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSG 232 (314)
T ss_dssp EEEEEC-SSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTC
T ss_pred eEEEEC-CChHHHHHHHHHHHhCCeeeeecccccccccchhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccc
Confidence 122222 3445544430 01111
Q ss_pred ---------Ec------cCC---cccC----CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHH
Q 013546 282 ---------IT------LSF---LVRL----SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYL 339 (441)
Q Consensus 282 ---------il------~~~---~~~l----G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~a 339 (441)
++ |.. ...+ +.+.||+++|| |.|+|||+|||+.. ..+++..|+.||+.|
T Consensus 233 ~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~iv~~~~~T-s~pgIyA~GDv~~~--------~~~~~~~A~~~G~~A 303 (314)
T 4a5l_A 233 EYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEGPKT-SVDGVFACGDVCDR--------VYRQAIVAAGSGCMA 303 (314)
T ss_dssp CEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCBTTBC-SSTTEEECSTTTCS--------SCCCHHHHHHHHHHH
T ss_pred cceeeccccceEecccccChhHhcccceEcCCeeEeCCCCcc-CCCCEEEEEeccCC--------cchHHHHHHHHHHHH
Confidence 00 000 0000 33558999999 99999999999932 235789999999999
Q ss_pred HHHHHHHhc
Q 013546 340 AELFNKKIG 348 (441)
Q Consensus 340 A~nI~~~l~ 348 (441)
|.++.++|+
T Consensus 304 A~~~~~yL~ 312 (314)
T 4a5l_A 304 ALSCEKWLQ 312 (314)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999985
No 24
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.89 E-value=3.9e-23 Score=212.76 Aligned_cols=223 Identities=20% Similarity=0.249 Sum_probs=148.9
Q ss_pred CcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccc-hhhhhcCCC---CccccccchhhhhhhhcCCCCEEEE
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPL-LASTCVGTL---EFRSVAEPVSRIQTSLSSDPNSYFY 183 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~l-l~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~v~~~ 183 (441)
++|+|||||++|+++|..|++. |++|+|||+++++.|.++ ++....+.. +.+.+....... +. ..++.++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~-~~gv~~~ 76 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEE---LS-NLGANVQ 76 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHH---HH-HTTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHH---HH-HcCCEEE
Confidence 3799999999999999999987 999999999987766554 333333432 233333333332 22 2466764
Q ss_pred E-EEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHHH--
Q 013546 184 L-ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLLL-- 259 (441)
Q Consensus 184 ~-~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~~-- 259 (441)
. ..+..++.+.+.+.+.+..+ ++..++.||+||||||++|+.|++||.+ ++++.++++.++.++.+....
T Consensus 77 ~~~~v~~i~~~~~~v~v~~~~~------g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (452)
T 2cdu_A 77 MRHQVTNVDPETKTIKVKDLIT------NEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAK 150 (452)
T ss_dssp ESEEEEEEEGGGTEEEEEETTT------CCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCS
T ss_pred eCCEEEEEEcCCCEEEEEecCC------CceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCC
Confidence 4 46999998888888875321 1124789999999999999999999986 567788888888877654311
Q ss_pred hcccccCCCCceeEee-------------------------------------------------------Cc-eE-EE-
Q 013546 260 NLMLSENPGDTVQLFS-------------------------------------------------------KY-FV-IT- 281 (441)
Q Consensus 260 ~~~~a~~~G~~~vE~a-------------------------------------------------------~~-v~-V~- 281 (441)
.+.+.+ +|..++|+| +. +. +.
T Consensus 151 ~vvViG-gG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~ 229 (452)
T 2cdu_A 151 TITIIG-SGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL 229 (452)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET
T ss_pred eEEEEC-cCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe
Confidence 111111 222222221 00 10 10
Q ss_pred ----------Ec-----cCC---c--cc---CCceeeCCCcccCCCCCEEEeccccccccc-CCCCCCCchHHHHHHHHH
Q 013546 282 ----------IT-----LSF---L--VR---LSQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPVLPALAQVAERQGK 337 (441)
Q Consensus 282 ----------il-----~~~---~--~~---lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~~p~~a~~A~~qg~ 337 (441)
++ |.. . .. -|+|.||++||| +.|+|||+|||+..++. .|++..++++..|++||+
T Consensus 230 ~g~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~ 308 (452)
T 2cdu_A 230 DGKEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGR 308 (452)
T ss_dssp TSCEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHH
T ss_pred CCCEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECCCcCc-CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHH
Confidence 00 000 0 01 178999999999 99999999999976432 233234689999999999
Q ss_pred HHHHHHH
Q 013546 338 YLAELFN 344 (441)
Q Consensus 338 ~aA~nI~ 344 (441)
++|+||.
T Consensus 309 ~aa~~i~ 315 (452)
T 2cdu_A 309 LVGLNLT 315 (452)
T ss_dssp HHHHTSS
T ss_pred HHHHHhC
Confidence 9999996
No 25
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.89 E-value=1.1e-23 Score=205.33 Aligned_cols=217 Identities=15% Similarity=0.154 Sum_probs=125.4
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccc-cch-hhhhhhhcCCCCEEEEE
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVA-EPV-SRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~-~~~-~~~~~~~~~~~~v~~~~ 184 (441)
|+..+|+||||||||++||.+|++.|++|+|||+...-+ .+. ....+......+. ..+ ....+.+.+...+.+..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRN--RVT-QNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYE 80 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGG--GGS-SCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCC--eee-eecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEe
Confidence 335689999999999999999999999999999875321 111 0001111111110 011 11122234556778887
Q ss_pred EEEEEEeCC-CCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCccc----ccccccCHhHHHHHHHHHHH
Q 013546 185 ASCIGIDTD-KHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKE----NAYFLREVNHAQEIRKKLLL 259 (441)
Q Consensus 185 ~~v~~id~~-~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~----~~~~l~~~~~a~~~~~~i~~ 259 (441)
..+..++.. .....+...+ ..++.||+||||||++|+.|++||.++ .++... ..+...++..
T Consensus 81 ~~~~~~~~~~~~~~~v~~~~---------g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~-~~~~~~~~~~--- 147 (304)
T 4fk1_A 81 KTVVMITKQSTGLFEIVTKD---------HTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCP-YCDGWELKDQ--- 147 (304)
T ss_dssp CCEEEEEECTTSCEEEEETT---------CCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCH-HHHSGGGTTS---
T ss_pred eEEEEeeecCCCcEEEEECC---------CCEEEeCEEEEccCCccccccccCccccccceeeecc-ccchhHhcCC---
Confidence 777766543 3333333321 137899999999999999999999752 111111 0010000000
Q ss_pred hcccccCCCC-------------------------------------------------------ceeEeeCceEEE---
Q 013546 260 NLMLSENPGD-------------------------------------------------------TVQLFSKYFVIT--- 281 (441)
Q Consensus 260 ~~~~a~~~G~-------------------------------------------------------~~vE~a~~v~V~--- 281 (441)
.+.+.+.++. ..+++.+..++.
T Consensus 148 ~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~~~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~ 227 (304)
T 4fk1_A 148 PLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELSQTIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAG 227 (304)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCCHHHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCE
T ss_pred ceeeecCCCchhhhHHHHHHhCCceEEEEeccccchhhhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecc
Confidence 0000000000 111111111111
Q ss_pred -Ecc-----------CCcccC---CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 013546 282 -ITL-----------SFLVRL---SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNKK 346 (441)
Q Consensus 282 -il~-----------~~~~~l---G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~ 346 (441)
++. ..+.++ |+|.||+++|| |.|+|||+|||+.. .+.++..|+.||+.||.+|.++
T Consensus 228 ~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~T-s~p~IyA~GDv~~~--------~~~~~~~A~~~G~~AA~~i~~~ 298 (304)
T 4fk1_A 228 GFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRT-SEKNIYLAGETTTQ--------GPSSLIIAASQGNKAAIAINSD 298 (304)
T ss_dssp EEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBC-SSTTEEECSHHHHT--------SCCCHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeccccCChhhhhcCeEECCCCCEEECcCCcc-CCCCEEEEeccCCC--------cchHHHHHHHHHHHHHHHHHHH
Confidence 110 011111 88999999999 99999999999932 3567899999999999999999
Q ss_pred hc
Q 013546 347 IG 348 (441)
Q Consensus 347 l~ 348 (441)
|.
T Consensus 299 L~ 300 (304)
T 4fk1_A 299 IT 300 (304)
T ss_dssp HH
T ss_pred Hh
Confidence 96
No 26
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.89 E-value=1.4e-22 Score=208.30 Aligned_cols=223 Identities=22% Similarity=0.292 Sum_probs=148.8
Q ss_pred CcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccc-hhhhhcCCC-CccccccchhhhhhhhcCCCCEEE-EE
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPL-LASTCVGTL-EFRSVAEPVSRIQTSLSSDPNSYF-YL 184 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~l-l~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~v~~-~~ 184 (441)
++|+|||||+||+++|..|++. |++|+|||+++.+.|.++ ++....+.. ..+.+....... +.+ .++.+ ..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~gv~~~~~ 76 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEK---MES-RGVNVFSN 76 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHH---HHH-TTCEEEET
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHH---HHH-CCCEEEEC
Confidence 3799999999999999999986 899999999998776654 333333332 233333333332 222 36676 45
Q ss_pred EEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHH----H
Q 013546 185 ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLL----L 259 (441)
Q Consensus 185 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~----~ 259 (441)
..+..++.+.+.|.+.+..+ ++..++.||+||||||+.|+.|++||.+ ++++.+++.+++.++.+.+. .
T Consensus 77 ~~v~~i~~~~~~v~~~~~~~------g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~ 150 (447)
T 1nhp_A 77 TEITAIQPKEHQVTVKDLVS------GEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVN 150 (447)
T ss_dssp EEEEEEETTTTEEEEEETTT------CCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCC
T ss_pred CEEEEEeCCCCEEEEEecCC------CceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCC
Confidence 57889999999988876211 1123589999999999999999999986 56777888888887766542 1
Q ss_pred hcccccCCCCceeEee-------------------------------------------------------Cce-EEE--
Q 013546 260 NLMLSENPGDTVQLFS-------------------------------------------------------KYF-VIT-- 281 (441)
Q Consensus 260 ~~~~a~~~G~~~vE~a-------------------------------------------------------~~v-~V~-- 281 (441)
.+.+.+ +|..|+|+| +.+ .+.
T Consensus 151 ~vvIiG-~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~ 229 (447)
T 1nhp_A 151 NVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTD 229 (447)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEES
T ss_pred eEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEEC
Confidence 111112 222222221 000 010
Q ss_pred ---------Ec-----cCC---c--cc---CCceeeCCCcccCCCCCEEEeccccccccc-CCCCCCCchHHHHHHHHHH
Q 013546 282 ---------IT-----LSF---L--VR---LSQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPVLPALAQVAERQGKY 338 (441)
Q Consensus 282 ---------il-----~~~---~--~~---lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~~p~~a~~A~~qg~~ 338 (441)
++ +.. . .+ -|+|.||+++|| +.|+|||+|||+..+.. .|+...++++..|++||+.
T Consensus 230 ~~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~ 308 (447)
T 1nhp_A 230 KNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRF 308 (447)
T ss_dssp SCEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBC-SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHH
T ss_pred CCEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECccccC-CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHH
Confidence 00 000 0 01 177999999999 99999999999975432 1332356799999999999
Q ss_pred HHHHHH
Q 013546 339 LAELFN 344 (441)
Q Consensus 339 aA~nI~ 344 (441)
+|+||.
T Consensus 309 aa~~i~ 314 (447)
T 1nhp_A 309 AVKNLE 314 (447)
T ss_dssp HHHTSS
T ss_pred HHHhhc
Confidence 999986
No 27
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.89 E-value=6.4e-23 Score=206.70 Aligned_cols=212 Identities=20% Similarity=0.296 Sum_probs=138.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC--CeEEEEcCCCCcccc-cchhhhhcCCCCcccccc-chhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI--YDAVCISPRNHMVFT-PLLASTCVGTLEFRSVAE-PVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g--~~Vtvie~~~~~~~~-~ll~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~v~~~~ 184 (441)
.++|+|||||+||+++|..|++.| ++|+|||+++...|. ++++....+......+.. .... +.+..++.++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~ 79 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGA----MAEQLNARILT 79 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHH----HHHHTTCEEEC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHH----HHHhCCcEEEe
Confidence 468999999999999999999988 579999998755443 334333222111111111 1122 22234677775
Q ss_pred -EEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHH--Hh
Q 013546 185 -ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLL--LN 260 (441)
Q Consensus 185 -~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~--~~ 260 (441)
..+..++.+.+.+.+.+ .++.||+||+|||+.|+.|++||.+ ++++..+++.++..++..+. ..
T Consensus 80 ~~~v~~i~~~~~~v~~~~------------~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 147 (384)
T 2v3a_A 80 HTRVTGIDPGHQRIWIGE------------EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRR 147 (384)
T ss_dssp SCCCCEEEGGGTEEEETT------------EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCE
T ss_pred CCEEEEEECCCCEEEECC------------cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCe
Confidence 46888988777776532 2689999999999999999999976 67888889988877766542 11
Q ss_pred cccccCCCCceeEeeC--------------------------------------c------------------eEEE---
Q 013546 261 LMLSENPGDTVQLFSK--------------------------------------Y------------------FVIT--- 281 (441)
Q Consensus 261 ~~~a~~~G~~~vE~a~--------------------------------------~------------------v~V~--- 281 (441)
+.+.+ +|..++|+|. + +.|+
T Consensus 148 v~ViG-gG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~ 226 (384)
T 2v3a_A 148 VLLLG-AGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSD 226 (384)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETT
T ss_pred EEEEC-CCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECC
Confidence 22222 2333322220 0 0010
Q ss_pred ---------Ec-----cC------Cc--ccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHH
Q 013546 282 ---------IT-----LS------FL--VRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYL 339 (441)
Q Consensus 282 ---------il-----~~------~~--~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~a 339 (441)
++ +. .+ .+-| |.||+++|| +.|+|||+|||+... + ...+.+..|..||+.+
T Consensus 227 g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t-~~~~IyA~GD~~~~~---~--~~~~~~~~a~~~g~~~ 299 (384)
T 2v3a_A 227 GEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRT-SHANIYALGDCAEVD---G--LNLLYVMPLMACARAL 299 (384)
T ss_dssp SCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBC-SSTTEEECGGGEEET---T--BCCCSHHHHHHHHHHH
T ss_pred CCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCC-CCCCEEEeeeeeeEC---C--CCcchHHHHHHHHHHH
Confidence 00 00 00 0006 999999999 999999999999652 1 1234677899999999
Q ss_pred HHHHH
Q 013546 340 AELFN 344 (441)
Q Consensus 340 A~nI~ 344 (441)
|+||.
T Consensus 300 a~~i~ 304 (384)
T 2v3a_A 300 AQTLA 304 (384)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99997
No 28
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.89 E-value=3.8e-23 Score=212.89 Aligned_cols=221 Identities=19% Similarity=0.245 Sum_probs=136.9
Q ss_pred CcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccc-hhhhhcCCC-CccccccchhhhhhhhcCCCCEEEE-E
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPL-LASTCVGTL-EFRSVAEPVSRIQTSLSSDPNSYFY-L 184 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~l-l~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~v~~~-~ 184 (441)
++|+|||||+||+++|..|++. |++|+|||+++++.|.+. ++....+.. ..+.+....... +. ..++.+. .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~gi~~~~~ 78 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEE---LR-RQKIQLLLN 78 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHH---HH-HTTEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHH---HH-HCCCEEEEC
Confidence 5899999999999999999987 899999999998876553 222222222 122222222222 22 2356664 5
Q ss_pred EEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHHH--hc
Q 013546 185 ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLLL--NL 261 (441)
Q Consensus 185 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~~--~~ 261 (441)
.+|++++.+.+.+.+.... +..++.||+||||||++|..|++||.+ ++++..+++.++..+...... .+
T Consensus 79 ~~V~~id~~~~~v~v~~~~--------~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v 150 (452)
T 3oc4_A 79 REVVAMDVENQLIAWTRKE--------EQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTV 150 (452)
T ss_dssp CEEEEEETTTTEEEEEETT--------EEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEE
T ss_pred CEEEEEECCCCEEEEEecC--------ceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEE
Confidence 6899999999998875211 124789999999999999999999986 556666666555443332211 11
Q ss_pred ccccCCCCceeEee--------------------------------------------------------CceEEE----
Q 013546 262 MLSENPGDTVQLFS--------------------------------------------------------KYFVIT---- 281 (441)
Q Consensus 262 ~~a~~~G~~~vE~a--------------------------------------------------------~~v~V~---- 281 (441)
.+.+ +|..++|+| +.+.|.
T Consensus 151 vViG-gG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g 229 (452)
T 3oc4_A 151 AVIG-AGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ 229 (452)
T ss_dssp EEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC
T ss_pred EEEC-CCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC
Confidence 1111 122222111 001111
Q ss_pred -------Ec-----cC---Ccc--cC---CceeeCCCcccCCCCCEEEeccccccccc-CCCCCCCchHHHHHHHHHHHH
Q 013546 282 -------IT-----LS---FLV--RL---SQIGVDEWLRAPSVEDVFALGDCAGFLEQ-TGKPVLPALAQVAERQGKYLA 340 (441)
Q Consensus 282 -------il-----~~---~~~--~l---G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~-~G~~~~p~~a~~A~~qg~~aA 340 (441)
++ |. +.. .+ |+|.||+++|| +.|+|||+|||+..++. .|+...++++..|..||+.+|
T Consensus 230 ~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa 308 (452)
T 3oc4_A 230 EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAYLQT-SVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVA 308 (452)
T ss_dssp EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHT
T ss_pred EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECcCccC-CCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHH
Confidence 11 00 000 01 78999999999 99999999999965421 233334679999999999999
Q ss_pred HHHH
Q 013546 341 ELFN 344 (441)
Q Consensus 341 ~nI~ 344 (441)
+||.
T Consensus 309 ~~i~ 312 (452)
T 3oc4_A 309 NNLE 312 (452)
T ss_dssp TSSS
T ss_pred HHhc
Confidence 9986
No 29
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.88 E-value=1.3e-22 Score=207.73 Aligned_cols=219 Identities=20% Similarity=0.266 Sum_probs=143.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCCCcccc-c-chhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRNHMVFT-P-LLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~~~~~~-~-ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
.++|+|||||+||+++|..|++.|+ +|+|||+++.+.|. + +......+....+.+.....+. +. ..+++++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~-~~gv~~~~ 79 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDA---YA-AQNIQLLG 79 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHH---HH-HTTEEEEC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHH---HH-hCCCEEEe
Confidence 5799999999999999999999988 79999999876654 2 2222222322222222222222 22 34788877
Q ss_pred E-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cc---cccccCHhHHHHHHHHHH-
Q 013546 185 A-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-EN---AYFLREVNHAQEIRKKLL- 258 (441)
Q Consensus 185 ~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~---~~~l~~~~~a~~~~~~i~- 258 (441)
+ .|+.++.+.+.|.+.++ .++.||+||+|||++|+.|++||.+ ++ ++.+++.+++.++.+.+.
T Consensus 80 ~~~v~~i~~~~~~v~~~~g-----------~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~ 148 (431)
T 1q1r_A 80 GTQVTAINRDRQQVILSDG-----------RALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIA 148 (431)
T ss_dssp SCCEEEEETTTTEEEETTS-----------CEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCT
T ss_pred CCEEEEEECCCCEEEECCC-----------CEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHhhc
Confidence 5 68999998888776432 3789999999999999999999975 44 777889998887765431
Q ss_pred -HhcccccCCCCceeEee-----------------------------------------------------C-----ce-
Q 013546 259 -LNLMLSENPGDTVQLFS-----------------------------------------------------K-----YF- 278 (441)
Q Consensus 259 -~~~~~a~~~G~~~vE~a-----------------------------------------------------~-----~v- 278 (441)
..+.+.+ +|..++|+| . .+
T Consensus 149 ~~~vvViG-gG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~ 227 (431)
T 1q1r_A 149 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVT 227 (431)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEE
Confidence 1111111 222222221 0 00
Q ss_pred EEE-----------Ec------cC------CcccC-CceeeCCCcccCCCCCEEEecccccccccC-CCCCCCchHHHHH
Q 013546 279 VIT-----------IT------LS------FLVRL-SQIGVDEWLRAPSVEDVFALGDCAGFLEQT-GKPVLPALAQVAE 333 (441)
Q Consensus 279 ~V~-----------il------~~------~~~~l-G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~-G~~~~p~~a~~A~ 333 (441)
.|. ++ +. .+..+ +.|.||+++|| +.|+|||+|||+..+.+. |.+....++..|+
T Consensus 228 ~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~gi~Vd~~~~t-s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~ 306 (431)
T 1q1r_A 228 AVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVDNGIVINEHMQT-SDPLIMAVGDCARFHSQLYDRWVRIESVPNAL 306 (431)
T ss_dssp EEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSSEECCTTSBC-SSTTEEECGGGEEEEETTTTEEEECCSHHHHH
T ss_pred EEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCCCCEEECCCccc-CCCCEEEEEeEEEEccccCCceEeeCHHHHHH
Confidence 011 00 00 00000 44999999999 999999999999765421 3222345789999
Q ss_pred HHHHHHHHHHH
Q 013546 334 RQGKYLAELFN 344 (441)
Q Consensus 334 ~qg~~aA~nI~ 344 (441)
.||+.+|.||.
T Consensus 307 ~qg~~aa~~i~ 317 (431)
T 1q1r_A 307 EQARKIAAILC 317 (431)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999997
No 30
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.87 E-value=2.3e-22 Score=193.80 Aligned_cols=213 Identities=12% Similarity=0.105 Sum_probs=130.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCccccc-chhhhhcC-CCCccccccchhhhhhhhcCCCCEEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTP-LLASTCVG-TLEFRSVAEPVSRIQTSLSSDPNSYFYLAS 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~-ll~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (441)
+++|+|||||++|+++|..|++.|++|+|||+++.....+ ..+..... .....++ ...+.+.+.+..++.++.++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~ 78 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEI---IAEARRQIERYPTIHWVEGR 78 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHH---HHHHHHHHTTCTTEEEEESC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHH---HHHHHHHHHhcCCeEEEEeE
Confidence 4689999999999999999999999999999876332111 11111110 1111111 12222224444578898899
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCccc----ccccccCHhHHHHHHHHHHHhcc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKE----NAYFLREVNHAQEIRKKLLLNLM 262 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~----~~~~l~~~~~a~~~~~~i~~~~~ 262 (441)
|+.++.+.+.+.+...+. .++.||+||+|||+.|+.|++||.++ .++... ..+...+.. ..+.
T Consensus 79 v~~i~~~~~~~~v~~~~g---------~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~---~~v~ 145 (297)
T 3fbs_A 79 VTDAKGSFGEFIVEIDGG---------RRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCP-YCHGYELDQ---GKIG 145 (297)
T ss_dssp EEEEEEETTEEEEEETTS---------CEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCH-HHHTGGGTT---CEEE
T ss_pred EEEEEEcCCeEEEEECCC---------CEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcc-cCcchhhcC---CEEE
Confidence 999998776665554321 36899999999999999999999753 111111 111000000 0011
Q ss_pred cccCCCCceeEee---------------------------------------------------CceEEE----Ec----
Q 013546 263 LSENPGDTVQLFS---------------------------------------------------KYFVIT----IT---- 283 (441)
Q Consensus 263 ~a~~~G~~~vE~a---------------------------------------------------~~v~V~----il---- 283 (441)
+.+ +|..++|+| +...+. ++
T Consensus 146 vvG-~G~~~~e~a~~l~~~g~v~~v~~~~~~~~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 146 VIA-ASPMAIHHALMLPDWGETTFFTNGIVEPDADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EEC-CSTTHHHHHHHGGGTSEEEEECTTTCCCCHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEE
T ss_pred EEe-cCccHHHHHHHhhhcCcEEEEECCCCCCCHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCc
Confidence 111 122221111 110110 11
Q ss_pred -cCC------cc-----cCC-ceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Q 013546 284 -LSF------LV-----RLS-QIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 284 -~~~------~~-----~lG-~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~l~ 348 (441)
+.. +. ..| +|.||+++|| +.|+|||+|||+. .|+++..|+.||+.+|.||.+.|.
T Consensus 225 ~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~~~---------~~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 225 RITVDWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDVAR---------PAGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp ECCCSCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGGGC---------TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCchhHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeecCC---------chHHHHHHHHhHHHHHHHHHHHHh
Confidence 100 00 014 7999999999 9999999999992 378999999999999999999996
No 31
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.87 E-value=3.5e-22 Score=207.99 Aligned_cols=223 Identities=15% Similarity=0.183 Sum_probs=139.6
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcccccc-hh-hhhcCCCC-------------cc-cc-ccch
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMVFTPL-LA-STCVGTLE-------------FR-SV-AEPV 167 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~~~~l-l~-~~~~g~~~-------------~~-~~-~~~~ 167 (441)
+..++|||||||+||+++|..|++. |++|+|||+++++.|... +. ....+... .+ .+ ..+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 3457899999999999999998765 899999999987765422 11 11111100 00 00 0000
Q ss_pred hhhh--hhhc--CCCCEEEEEE-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCc-----
Q 013546 168 SRIQ--TSLS--SDPNSYFYLA-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGV----- 237 (441)
Q Consensus 168 ~~~~--~~~~--~~~~v~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~----- 237 (441)
.... ..+. ...++.++.+ .|+.||.+.+.|.+.++ .++.||+||||||++|+.++++|.
T Consensus 89 ~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g-----------~~i~yd~lviATGs~p~~~~~~~~~~~~~ 157 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDG-----------SQITYEKCLIATGGTPRSLSAIDRAGAEV 157 (493)
T ss_dssp GGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTS-----------CEEEEEEEEECCCEEECCCHHHHTSCHHH
T ss_pred HhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCC-----------CEEECCEEEECCCCCCCCCCCcccccccc
Confidence 0000 0011 1357888886 89999998888877542 378999999999999988766552
Q ss_pred ccccccccCHhHHHHHHHHHHH--hcccccCCCCceeEeeC---------ceEEE-------------------------
Q 013546 238 KENAYFLREVNHAQEIRKKLLL--NLMLSENPGDTVQLFSK---------YFVIT------------------------- 281 (441)
Q Consensus 238 ~~~~~~l~~~~~a~~~~~~i~~--~~~~a~~~G~~~vE~a~---------~v~V~------------------------- 281 (441)
.++++.+++++++..+...+.. .+.+.+ +|..|+|+|. +++|+
T Consensus 158 ~~~v~~~~~~~d~~~l~~~~~~~~~vvViG-gG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l 236 (493)
T 1m6i_A 158 KSRTTLFRKIGDFRSLEKISREVKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKV 236 (493)
T ss_dssp HHTEEECCSHHHHHHHHHHHHHCSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHH
T ss_pred cCceEEEcCHHHHHHHHHHhhcCCeEEEEC-CCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHH
Confidence 2466778888888877655321 111112 2333322220 01111
Q ss_pred --------------------------------------Ec-----cC--------Cccc--CCceeeCCCcccCCCCCEE
Q 013546 282 --------------------------------------IT-----LS--------FLVR--LSQIGVDEWLRAPSVEDVF 308 (441)
Q Consensus 282 --------------------------------------il-----~~--------~~~~--lG~I~Vd~~lqt~~~~~Vf 308 (441)
++ +. +..+ -|+|.||++||| .|+||
T Consensus 237 ~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t--~~~Iy 314 (493)
T 1m6i_A 237 RREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA--RSNIW 314 (493)
T ss_dssp HTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE--ETTEE
T ss_pred HhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc--CCCee
Confidence 00 00 0000 158999999998 59999
Q ss_pred EecccccccccC-CCCCCCchHHHHHHHHHHHHHHHH
Q 013546 309 ALGDCAGFLEQT-GKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 309 A~GD~a~~~~~~-G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|||+..++.. |. ....++..|+.||+.+|.||.
T Consensus 315 A~GD~a~~~~~~~g~-~~~~~~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 315 VAGDAACFYDIKLGR-RRVEHHDHAVVSGRLAGENMT 350 (493)
T ss_dssp ECGGGEEEEETTTEE-ECCCCHHHHHHHHHHHHHHHT
T ss_pred EeeeeEeccCcccCc-cccchHHHHHHHHHHHHHHhc
Confidence 999999875432 32 245578899999999999997
No 32
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.85 E-value=1.4e-21 Score=190.48 Aligned_cols=219 Identities=19% Similarity=0.173 Sum_probs=126.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCC--CCcccccchhhhhcCCC--CccccccchhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPR--NHMVFTPLLASTCVGTL--EFRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~--~~~~~~~ll~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
.++|+|||||++|+++|..|++.|++|+|||++ ....+.+..+... +.. ...++...+.+ ..+..++.++.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~v~~~~ 89 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYL-GLIEIQASDMIKVFNK----HIEKYEVPVLL 89 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCST-TSTTEEHHHHHHHHHH----HHHTTTCCEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccC-CCCCCCHHHHHHHHHH----HHHHcCCEEEE
Confidence 469999999999999999999999999999997 1111111111111 010 01111111111 22234566666
Q ss_pred EEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCccc---ccccccCHhH------------
Q 013546 185 ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKE---NAYFLREVNH------------ 249 (441)
Q Consensus 185 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~---~~~~l~~~~~------------ 249 (441)
++|++++.+.+.+.+...+. .++.||+||+|||+.|+.|++||.+. .........+
T Consensus 90 ~~v~~i~~~~~~~~v~~~~g---------~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vv 160 (323)
T 3f8d_A 90 DIVEKIENRGDEFVVKTKRK---------GEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVI 160 (323)
T ss_dssp SCEEEEEEC--CEEEEESSS---------CEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEE
T ss_pred EEEEEEEecCCEEEEEECCC---------CEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEE
Confidence 88999988766666554321 37899999999999999999998753 1111111111
Q ss_pred -----HHHHHHHHHH-hcc--cccC----C----------CCceeEe--------------------eC---ce--EEE-
Q 013546 250 -----AQEIRKKLLL-NLM--LSEN----P----------GDTVQLF--------------------SK---YF--VIT- 281 (441)
Q Consensus 250 -----a~~~~~~i~~-~~~--~a~~----~----------G~~~vE~--------------------a~---~v--~V~- 281 (441)
+.++...+.. ... +... . ...+|++ .+ +- .+.
T Consensus 161 G~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~ 240 (323)
T 3f8d_A 161 GGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNV 240 (323)
T ss_dssp CCSHHHHHHHHHHHHHSSEEEEECSSSSCCSCHHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEEC
T ss_pred CCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcCHHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEc
Confidence 1111111100 000 0000 0 0001211 11 10 111
Q ss_pred ---Ec-----------cCCccc---CCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 282 ---IT-----------LSFLVR---LSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 282 ---il-----------~~~~~~---lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
++ ...+.. .|+|.||+++|| +.|+|||+|||+..+ ..++++..|+.||+.+|.||.
T Consensus 241 D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~------~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 241 NGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRT-SVPGVFAAGDCTSAW------LGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp SEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBC-SSTTEEECSTTBSTT------TTCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCChhHHhhcCeeecCCCcEecCCCcee-cCCCEEEcceecCCC------CcccceeehhhHHHHHHHHHH
Confidence 11 001001 189999999999 999999999999431 247899999999999999999
Q ss_pred HHhc
Q 013546 345 KKIG 348 (441)
Q Consensus 345 ~~l~ 348 (441)
+.|.
T Consensus 314 ~~l~ 317 (323)
T 3f8d_A 314 RYVT 317 (323)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9996
No 33
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.84 E-value=9.7e-21 Score=195.64 Aligned_cols=120 Identities=18% Similarity=0.133 Sum_probs=75.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc----cchhh------------hh----c-CCCC------cc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT----PLLAS------------TC----V-GTLE------FR 161 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~----~ll~~------------~~----~-g~~~------~~ 161 (441)
.++|+|||||++|+++|..|++.|++|+|||+++ ++-. .+.|. .. . |... ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRS 82 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHH
Confidence 5799999999999999999999999999999983 3210 00000 00 0 1100 00
Q ss_pred cccc-------chh--hhhhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 162 SVAE-------PVS--RIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 162 ~~~~-------~~~--~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+.. .++ .....+.+..+++++.+++..++.. .+.+...+ ++..++.||+||||||++|+.|
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~--~~~v~~~~-------g~~~~~~~d~lviAtGs~p~~p 153 (467)
T 1zk7_A 83 KLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQ--SLTVRLNE-------GGERVVMFDRCLVATGASPAVP 153 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETT--EEEEEETT-------SSEEEEECSEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCC--EEEEEeCC-------CceEEEEeCEEEEeCCCCCCCC
Confidence 0000 010 0112123223899999988888764 44444321 1124689999999999999999
Q ss_pred CCCCcc
Q 013546 233 GIKGVK 238 (441)
Q Consensus 233 ~ipG~~ 238 (441)
++||.+
T Consensus 154 ~i~G~~ 159 (467)
T 1zk7_A 154 PIPGLK 159 (467)
T ss_dssp CCTTTT
T ss_pred CCCCCC
Confidence 999975
No 34
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.83 E-value=5.5e-21 Score=187.12 Aligned_cols=222 Identities=11% Similarity=0.037 Sum_probs=128.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcC----CCCcccc-ccchhhhhhhhcCCCCEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVG----TLEFRSV-AEPVSRIQTSLSSDPNSYFY 183 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g----~~~~~~~-~~~~~~~~~~~~~~~~v~~~ 183 (441)
.++|+|||||++|+++|..|++.|++|+|||+++.++... .+..... .+..... ...+........+..++.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL-SALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTIC 85 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH-HHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEE
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee-hhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEE
Confidence 4689999999999999999999999999999998764111 0000000 0000000 01111111112233456666
Q ss_pred -EEEEEEEeCCCC-EEEEEecCCCCCCCCCCcceeeCCEEEEcCCC---CcCCCCCCCccc----cccc-ccCHhH----
Q 013546 184 -LASCIGIDTDKH-EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGA---EPLTFGIKGVKE----NAYF-LREVNH---- 249 (441)
Q Consensus 184 -~~~v~~id~~~~-~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs---~p~~~~ipG~~~----~~~~-l~~~~~---- 249 (441)
..+|++++...+ .+.+...+ .++.||+||+|||+ .|+.|++||.+. .++. +....+
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~----------g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~~~~~~~~~~~~ 155 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNE----------ETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQKFAGR 155 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESS----------EEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEESSCSCGGGGBTC
T ss_pred ccCEEEEEEECCCCcEEEEECC----------CEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEEecCCHHHcCCC
Confidence 468999988766 33333311 25899999999999 888889998753 1211 111111
Q ss_pred ----------HHHHHHHHHHh---cccccC----------------CC-----------------CceeEeeC-----ce
Q 013546 250 ----------AQEIRKKLLLN---LMLSEN----------------PG-----------------DTVQLFSK-----YF 278 (441)
Q Consensus 250 ----------a~~~~~~i~~~---~~~a~~----------------~G-----------------~~~vE~a~-----~v 278 (441)
+.++-..+... +.+... .| ...+.+.+ ..
T Consensus 156 ~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~ 235 (332)
T 3lzw_A 156 RVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKE 235 (332)
T ss_dssp EEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSCHHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEE
T ss_pred EEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCccHHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceE
Confidence 11111111000 000000 00 00111111 00
Q ss_pred EEE----Ec-----cC------Cc--ccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHH
Q 013546 279 VIT----IT-----LS------FL--VRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAE 341 (441)
Q Consensus 279 ~V~----il-----~~------~~--~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~ 341 (441)
.+. ++ +. .+ .+-|+|.||+++|| +.|+|||+|||+.++ ..|+++..|+.||+.+|.
T Consensus 236 ~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~------~~~~~~~~A~~~g~~aa~ 308 (332)
T 3lzw_A 236 ILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMET-NIEGFFAAGDICTYE------GKVNLIASGFGEAPTAVN 308 (332)
T ss_dssp EEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBC-SSTTEEECGGGEECT------TCCCCHHHHHHHHHHHHH
T ss_pred EEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCce-ecCCEEEccceecCC------CCcceEeeehhhHHHHHH
Confidence 111 11 10 00 01188999999999 999999999999653 247899999999999999
Q ss_pred HHHHHhc
Q 013546 342 LFNKKIG 348 (441)
Q Consensus 342 nI~~~l~ 348 (441)
||.+.|.
T Consensus 309 ~i~~~l~ 315 (332)
T 3lzw_A 309 NAKAYMD 315 (332)
T ss_dssp HHHHHHC
T ss_pred HHHHhhC
Confidence 9999996
No 35
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.83 E-value=6e-21 Score=187.32 Aligned_cols=121 Identities=13% Similarity=0.079 Sum_probs=80.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC----Ccccccchhhhh-----cCCCC---ccccccchhhhhhh
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN----HMVFTPLLASTC-----VGTLE---FRSVAEPVSRIQTS 173 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~----~~~~~~ll~~~~-----~g~~~---~~~~~~~~~~~~~~ 173 (441)
..++++|+|||||++|+++|..|++.|++|+|||+.+ ..+ ..+.... .+... ..++...+.+.
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 93 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG--GQLTTTTEIENFPGFPDGLTGSELMDRMREQ--- 93 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT--CGGGGSSEECCSTTCTTCEEHHHHHHHHHHH---
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcC--cccccchhhcccCCCcccCCHHHHHHHHHHH---
Confidence 3456799999999999999999999999999999965 221 1111000 01111 01111111221
Q ss_pred hcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc
Q 013546 174 LSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 174 ~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
+ +..++.++.+.|++++.+.+.+.+...... +..++.||+||+|+|+.|+.|++||.+
T Consensus 94 ~-~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~------~~~~~~~d~vvlAtG~~~~~~~~~g~~ 151 (338)
T 3itj_A 94 S-TKFGTEIITETVSKVDLSSKPFKLWTEFNE------DAEPVTTDAIILATGASAKRMHLPGEE 151 (338)
T ss_dssp H-HHTTCEEECSCEEEEECSSSSEEEEETTCS------SSCCEEEEEEEECCCEEECCCCCTTHH
T ss_pred H-HHcCCEEEEeEEEEEEEcCCEEEEEEEecC------CCcEEEeCEEEECcCCCcCCCCCCCch
Confidence 2 234678887889999998888877653110 124689999999999999999999864
No 36
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.83 E-value=5.2e-21 Score=197.74 Aligned_cols=121 Identities=21% Similarity=0.265 Sum_probs=78.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc----cchhhhh---------------c--CCCCccccccc-
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT----PLLASTC---------------V--GTLEFRSVAEP- 166 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~----~ll~~~~---------------~--g~~~~~~~~~~- 166 (441)
..+|+||||||+|+++|..|++.|++|+|||+++.++.. .+.|... . ...+...+...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 358999999999999999999999999999988876421 1111100 0 00011100000
Q ss_pred -----hh--hhhhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc
Q 013546 167 -----VS--RIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 167 -----~~--~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
+. .....+.+..++.++.+++..++.. .+.+...+ ++..++.||+||||||+.|+.|++||.+
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~--~~~V~~~~-------g~~~~~~~d~lviAtG~~p~~p~i~G~~ 153 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPT--HVIVKTDE-------GKEIEAETRYMIIASGAETAKLRLPGVE 153 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETT--EEEEEETT-------SCEEEEEEEEEEECCCEEECCCCCTTGG
T ss_pred HhheeccccchHHHHHHhCCCEEEEeEEEEecCC--eEEEEcCC-------CcEEEEecCEEEECCCCCccCCCCCCcc
Confidence 11 1112234456899999999999865 44444321 1112389999999999999999999975
No 37
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.83 E-value=2.7e-21 Score=202.79 Aligned_cols=119 Identities=14% Similarity=0.085 Sum_probs=76.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc----cchhhhh--------------------cCCCC--
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT----PLLASTC--------------------VGTLE-- 159 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~----~ll~~~~--------------------~g~~~-- 159 (441)
++..++|+|||||++|+++|..|++.|++|+|||++++++-. .+.|... .....
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 119 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKV 119 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhh
Confidence 344679999999999999999999999999999999854311 1111110 00000
Q ss_pred --ccccccchhhh-h---hhh----cCCCCEEEE-EEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCC
Q 013546 160 --FRSVAEPVSRI-Q---TSL----SSDPNSYFY-LASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAE 228 (441)
Q Consensus 160 --~~~~~~~~~~~-~---~~~----~~~~~v~~~-~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~ 228 (441)
.+.+...+... . ..+ .+..++.++ .+.+..++. +.+.+. + ..+.||+||||||+.
T Consensus 120 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g-----------~~~~~d~lViATGs~ 185 (523)
T 1mo9_A 120 VGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-G-----------KVFKAKNLILAVGAG 185 (523)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-T-----------EEEEBSCEEECCCEE
T ss_pred hhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-C-----------EEEEeCEEEECCCCC
Confidence 00011111110 0 112 034567777 778888875 456543 1 368999999999999
Q ss_pred cCCCCCCCcc
Q 013546 229 PLTFGIKGVK 238 (441)
Q Consensus 229 p~~~~ipG~~ 238 (441)
|..|++||.+
T Consensus 186 p~~p~i~G~~ 195 (523)
T 1mo9_A 186 PGTLDVPGVN 195 (523)
T ss_dssp CCCCCSTTTT
T ss_pred CCCCCCCCcc
Confidence 9999999975
No 38
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.82 E-value=2.2e-20 Score=182.70 Aligned_cols=118 Identities=13% Similarity=0.100 Sum_probs=75.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhh-hcCCCCccccc-cchhhhhhhhcCCCCEEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLAST-CVGTLEFRSVA-EPVSRIQTSLSSDPNSYFYLAS 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~-~~g~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~ 186 (441)
.++|+|||||++|+++|..|++.|++|+|||+.. .+ ..+.... ....+.+..+. ..+........+..++.++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 93 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AG-GLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVE 93 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TT-GGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETCC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CC-ccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEee
Confidence 4689999999999999999999999999999953 21 1111000 00000000000 0111111112233467777788
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
+.+++.+.+.+.+... + .++.||+||+|+|+.|+.|++||.+
T Consensus 94 v~~i~~~~~~~~v~~~--~--------~~~~~~~li~AtG~~~~~~~i~g~~ 135 (319)
T 3cty_A 94 VRSIKKTQGGFDIETN--D--------DTYHAKYVIITTGTTHKHLGVKGES 135 (319)
T ss_dssp EEEEEEETTEEEEEES--S--------SEEEEEEEEECCCEEECCCCCBTTT
T ss_pred EEEEEEeCCEEEEEEC--C--------CEEEeCEEEECCCCCcccCCCCChH
Confidence 9999877775555431 1 2789999999999999988888864
No 39
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.82 E-value=2.8e-20 Score=182.97 Aligned_cols=223 Identities=14% Similarity=0.110 Sum_probs=126.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccch--hhhh-cCCCCcccc-ccch-hhhhhhhcCCCCEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLL--ASTC-VGTLEFRSV-AEPV-SRIQTSLSSDPNSYFY 183 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll--~~~~-~g~~~~~~~-~~~~-~~~~~~~~~~~~v~~~ 183 (441)
.++|+|||||++|+++|..|++.|++|+|||+++.++..... +... ........+ ...+ ..+.+.+. ..++.+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~ 83 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVA-PFNPVYS 83 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHG-GGCCEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHH-HcCCEEE
Confidence 468999999999999999999999999999998866421100 0000 000000000 0011 11111122 2244554
Q ss_pred -EEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCC---CcCCCCCCCcccc----cc-cccCHhHH----
Q 013546 184 -LASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGA---EPLTFGIKGVKEN----AY-FLREVNHA---- 250 (441)
Q Consensus 184 -~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs---~p~~~~ipG~~~~----~~-~l~~~~~a---- 250 (441)
..+|..++.+.+.+.+...+. .++.||+||+|+|+ .|+.+++||.+.. ++ .++..++.
T Consensus 84 ~~~~v~~i~~~~~~~~v~~~~g---------~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 154 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTTSQG---------NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKAEFQGKR 154 (335)
T ss_dssp ESCCEEEEEEETTEEEEEETTS---------CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCGGGGTTCE
T ss_pred eCCEEEEEEECCCEEEEEECCC---------CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCchhhcCCCE
Confidence 457888887665655554211 36899999999998 5777788886421 21 12332221
Q ss_pred ----------HHHHHHHHH-h--cccccC--------------------CCC-----------------ceeEee---Cc
Q 013546 251 ----------QEIRKKLLL-N--LMLSEN--------------------PGD-----------------TVQLFS---KY 277 (441)
Q Consensus 251 ----------~~~~~~i~~-~--~~~a~~--------------------~G~-----------------~~vE~a---~~ 277 (441)
.++-..+.. . +.+... .|. .++++. ++
T Consensus 155 v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g 234 (335)
T 2zbw_A 155 VLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQ 234 (335)
T ss_dssp EEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSCHHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTC
T ss_pred EEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCccHHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCC
Confidence 111111000 0 000000 000 012221 11
Q ss_pred --eEEE----E-----------ccCCcc--cCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHH
Q 013546 278 --FVIT----I-----------TLSFLV--RLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKY 338 (441)
Q Consensus 278 --v~V~----i-----------l~~~~~--~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~ 338 (441)
..+. + +..++. +-|+|.||+++|| +.|+|||+|||+..+ ..++++..|+.||+.
T Consensus 235 ~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~------~~~~~~~~A~~~g~~ 307 (335)
T 2zbw_A 235 EELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMAT-SIPGVYACGDIVTYP------GKLPLIVLGFGEAAI 307 (335)
T ss_dssp CEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBC-SSTTEEECSTTEECT------TCCCCHHHHHHHHHH
T ss_pred ceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCC-CCCCEEEeccccccC------cchhhhhhhHHHHHH
Confidence 1111 0 111100 1178999999999 999999999999653 236799999999999
Q ss_pred HHHHHHHHhc
Q 013546 339 LAELFNKKIG 348 (441)
Q Consensus 339 aA~nI~~~l~ 348 (441)
+|.||...|.
T Consensus 308 aa~~i~~~l~ 317 (335)
T 2zbw_A 308 AANHAAAYAN 317 (335)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999999986
No 40
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.82 E-value=7.1e-21 Score=197.03 Aligned_cols=120 Identities=16% Similarity=0.138 Sum_probs=75.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc----cchhh-----------------h-hcCCCCccccccc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT----PLLAS-----------------T-CVGTLEFRSVAEP 166 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~----~ll~~-----------------~-~~g~~~~~~~~~~ 166 (441)
.++|+|||||++|+++|..|++.|++|+|||+++.++.. .+.|. . ..|.. .......
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~-~~~~~~~ 84 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIE-MSEVRLN 84 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEE-ESCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccc-cCCCccC
Confidence 468999999999999999999999999999999765311 00110 0 01111 0000001
Q ss_pred hhhh--------------hhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 167 VSRI--------------QTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 167 ~~~~--------------~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
...+ ...+.+..+++++.+++..++. +.+.+...+ ++..++.||+||+|||+.|+.|
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~~~v~~~~-------gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGK--NQVTATKAD-------GGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEET--TEEEEECTT-------SCEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecC--CEEEEEecC-------CCcEEEEeCEEEECCCCCCCCC
Confidence 1100 0111223578888888777764 455554321 0113689999999999999999
Q ss_pred CCCCcc
Q 013546 233 GIKGVK 238 (441)
Q Consensus 233 ~ipG~~ 238 (441)
++||.+
T Consensus 156 ~i~g~~ 161 (474)
T 1zmd_A 156 PGITID 161 (474)
T ss_dssp TTCCCC
T ss_pred CCCCCC
Confidence 888875
No 41
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.82 E-value=9.2e-21 Score=198.51 Aligned_cols=121 Identities=15% Similarity=0.128 Sum_probs=76.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC--------Ccccccchhh-----h----------------hcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN--------HMVFTPLLAS-----T----------------CVGTLE 159 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~--------~~~~~~ll~~-----~----------------~~g~~~ 159 (441)
..+|+||||||||+++|..|++.|++|+|||+++ .++ ..++.. . ..|...
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~G-Gtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLG-GTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTT-CHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcc-cccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 4689999999999999999999999999999854 222 111110 0 001110
Q ss_pred -------ccccccchhhhh-------hhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcC
Q 013546 160 -------FRSVAEPVSRIQ-------TSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAA 225 (441)
Q Consensus 160 -------~~~~~~~~~~~~-------~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAt 225 (441)
...+....+... ....+..++.++.+.+..++.. .+.+...+ ++..++.||+|||||
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~--~v~v~~~~-------g~~~~i~~d~lViAT 181 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPH--RIKATNNK-------GKEKIYSAERFLIAT 181 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETT--EEEEECTT-------CCCCEEEEEEEEECC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC--EEEEEcCC-------CCEEEEECCEEEEEC
Confidence 000000011100 0112235788999988888764 44444321 223478999999999
Q ss_pred CCCcCCCCCCCccc
Q 013546 226 GAEPLTFGIKGVKE 239 (441)
Q Consensus 226 Gs~p~~~~ipG~~~ 239 (441)
|++|+.|++||.++
T Consensus 182 Gs~p~~p~i~G~~~ 195 (519)
T 3qfa_A 182 GERPRYLGIPGDKE 195 (519)
T ss_dssp CEEECCCCCTTHHH
T ss_pred CCCcCCCCCCCccC
Confidence 99999999999643
No 42
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.82 E-value=3.5e-20 Score=181.76 Aligned_cols=116 Identities=15% Similarity=0.110 Sum_probs=73.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhh----hcCCCCccccccchhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLAST----CVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
.++|+||||||+|+++|..|++.|++|+|||+.. ++ ..+.... ..+... ......+........+..++.++.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g-g~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~gv~~~~ 84 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PG-GQIAWSEEVENFPGFPE-PIAGMELAQRMHQQAEKFGAKVEM 84 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TT-GGGGGCSCBCCSTTCSS-CBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CC-cccccccccccCCCCCC-CCCHHHHHHHHHHHHHHcCCEEEe
Confidence 4689999999999999999999999999999983 22 1111000 001100 000001111111112234677777
Q ss_pred EEEEEEeCC--CC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc
Q 013546 185 ASCIGIDTD--KH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 185 ~~v~~id~~--~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
+++.+++.+ .+ .+...++ .++.||+||+|+|+.|+.|++||.+
T Consensus 85 ~~v~~i~~~~~~~~~~~v~~~~g-----------~~~~~~~vv~AtG~~~~~~~i~g~~ 132 (325)
T 2q7v_A 85 DEVQGVQHDATSHPYPFTVRGYN-----------GEYRAKAVILATGADPRKLGIPGED 132 (325)
T ss_dssp CCEEEEEECTTSSSCCEEEEESS-----------CEEEEEEEEECCCEEECCCCCTTTT
T ss_pred eeEEEEEeccCCCceEEEEECCC-----------CEEEeCEEEECcCCCcCCCCCCChh
Confidence 889999876 43 4443331 3789999999999999989899875
No 43
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.82 E-value=2.4e-20 Score=181.16 Aligned_cols=117 Identities=10% Similarity=0.001 Sum_probs=73.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEE-EcCCCCcccccchhhh----hcCCCCccccccchhhhhhhhcCCCCEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVC-ISPRNHMVFTPLLAST----CVGTLEFRSVAEPVSRIQTSLSSDPNSYFY 183 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtv-ie~~~~~~~~~ll~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 183 (441)
+++|+|||||+||+++|..|++.|++|+| ||+ +.++. .+.... ..+..... ....+........+..++.++
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~ 80 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGG-QITSSSEIENYPGVAQVM-DGISFMAPWSEQCMRFGLKHE 80 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTG-GGGGCSCBCCSTTCCSCB-CHHHHHHHHHHHHTTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCc-eeeeeceeccCCCCCCCC-CHHHHHHHHHHHHHHcCcEEE
Confidence 57999999999999999999999999999 999 43321 111000 00111000 001111111123344577888
Q ss_pred EEEEEEEeCCC--CEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc
Q 013546 184 LASCIGIDTDK--HEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 184 ~~~v~~id~~~--~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
.++|+++ .+. +.+.+.... +. ++.||+||+|||+.|+.|++||.+
T Consensus 81 ~~~v~~i-~~~~~~~~~v~~~~--------~~-~~~~d~lvlAtG~~~~~~~~~g~~ 127 (315)
T 3r9u_A 81 MVGVEQI-LKNSDGSFTIKLEG--------GK-TELAKAVIVCTGSAPKKAGFKGED 127 (315)
T ss_dssp CCCEEEE-EECTTSCEEEEETT--------SC-EEEEEEEEECCCEEECCCCCBTTT
T ss_pred EEEEEEE-ecCCCCcEEEEEec--------CC-EEEeCEEEEeeCCCCCCCCCCChh
Confidence 7888888 444 455521110 12 789999999999999999999875
No 44
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.82 E-value=6.6e-21 Score=198.46 Aligned_cols=44 Identities=30% Similarity=0.464 Sum_probs=40.6
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|.||+++|| +.|+|||+|||+. .++++..|++||+++|.||.
T Consensus 310 G~i~Vd~~~~t-~~~~IyA~GD~~~---------~~~l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 310 GGVQVDEFSRT-NVPNIYAIGDITD---------RLMLTPVAINEGAALVDTVF 353 (495)
T ss_dssp SSBCCCTTCBC-SSTTEEECGGGGC---------SCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCcc-CCCCEEEEeccCC---------CccCHHHHHHHHHHHHHHhc
Confidence 78999999999 9999999999992 36799999999999999997
No 45
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.81 E-value=9.9e-21 Score=196.87 Aligned_cols=44 Identities=32% Similarity=0.561 Sum_probs=40.9
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|.||+++|| +.|+|||+|||+ ..|+++..|+.||+.+|+||.
T Consensus 318 G~i~vd~~~~t-~~~~IyA~GD~~---------~~~~~~~~A~~~g~~aa~~i~ 361 (491)
T 3urh_A 318 GRVEIDRHFQT-SIAGVYAIGDVV---------RGPMLAHKAEDEGVAVAEIIA 361 (491)
T ss_dssp SCBCCCTTCBC-SSTTEEECGGGS---------SSCCCHHHHHHHHHHHHHHHT
T ss_pred CCEeECCCCCC-CCCCEEEEEecC---------CCccchhHHHHHHHHHHHHHc
Confidence 78999999999 999999999999 246899999999999999997
No 46
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.81 E-value=1.4e-20 Score=195.66 Aligned_cols=45 Identities=38% Similarity=0.510 Sum_probs=41.0
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|.||+++|| +.|+|||+|||+. + .|.++..|+.||+++|+||.
T Consensus 306 G~i~vd~~~~t-~~~~IyA~GD~~~-----~---~~~~~~~A~~~g~~aa~~i~ 350 (488)
T 3dgz_A 306 QKIIVDAQEAT-SVPHIYAIGDVAE-----G---RPELTPTAIKAGKLLAQRLF 350 (488)
T ss_dssp CCBCCCTTSBC-SSTTEEECGGGBT-----T---CCCCHHHHHHHHHHHHHHHH
T ss_pred CeEeECCCCcc-CCCCEEEeEEecC-----C---CCcchhHHHHHHHHHHHHHc
Confidence 78999999999 9999999999982 2 46889999999999999998
No 47
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.81 E-value=2.1e-20 Score=192.30 Aligned_cols=113 Identities=13% Similarity=0.138 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccch-----hhh-----------h------cCCC------Cc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLL-----AST-----------C------VGTL------EF 160 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll-----~~~-----------~------~g~~------~~ 160 (441)
..+|+|||||++|+++|..|++.|++|+|||+++ ++ ..++ |.. . .|.. +.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~G-G~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~ 81 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LG-GTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW 81 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TT-HHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CC-CcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 4689999999999999999999999999999974 32 1111 110 0 0100 00
Q ss_pred cccccchhhh-------hhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC
Q 013546 161 RSVAEPVSRI-------QTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG 233 (441)
Q Consensus 161 ~~~~~~~~~~-------~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ 233 (441)
..+....+.. .....+..++.++.+++..++. +.+.+ ++ .++.||+||||||++|..|+
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~~-~g-----------~~~~~d~lviAtGs~p~~p~ 147 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA--KTLEV-NG-----------ETITADHILIATGGRPSHPD 147 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEET--TEEEE-TT-----------EEEEEEEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEE-CC-----------EEEEeCEEEECCCCCCCCCC
Confidence 0000000000 0001123578888888877764 46655 21 37899999999999999999
Q ss_pred CCCc
Q 013546 234 IKGV 237 (441)
Q Consensus 234 ipG~ 237 (441)
+||.
T Consensus 148 i~g~ 151 (450)
T 1ges_A 148 IPGV 151 (450)
T ss_dssp STTG
T ss_pred CCCc
Confidence 9987
No 48
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.81 E-value=1.3e-20 Score=194.05 Aligned_cols=119 Identities=12% Similarity=0.098 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc----cchhhh-----------h-----cCCCCccccccchh
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT----PLLAST-----------C-----VGTLEFRSVAEPVS 168 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~----~ll~~~-----------~-----~g~~~~~~~~~~~~ 168 (441)
..+|+|||||+||+++|..|++.|++|+|||++ .++-. .+.|.. . .|.. .........
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~-~~~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIK-AENVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEE-CCSCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcc-cCCCccCHH
Confidence 358999999999999999999999999999998 33210 111110 0 0110 000000111
Q ss_pred h--------------hhhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCC
Q 013546 169 R--------------IQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGI 234 (441)
Q Consensus 169 ~--------------~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~i 234 (441)
. ....+.+..++.++.+.+..++. +.+.+...+ + ..++.||+||+|||++|+.|++
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~--~~v~V~~~~-------G-~~~i~~d~lViATGs~p~~~~~ 150 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDA--NTVRVVNGD-------S-AQTYTFKNAIIATGSRPIELPN 150 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEET--TEEEEEETT-------E-EEEEECSEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC--CeEEEEeCC-------C-cEEEEeCEEEEecCCCCCCCCC
Confidence 0 00112234578888887776764 445554321 0 1368999999999999999988
Q ss_pred CCccc
Q 013546 235 KGVKE 239 (441)
Q Consensus 235 pG~~~ 239 (441)
||.+.
T Consensus 151 ~g~~~ 155 (455)
T 1ebd_A 151 FKFSN 155 (455)
T ss_dssp BCCCS
T ss_pred CCccc
Confidence 88653
No 49
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.81 E-value=2.4e-20 Score=192.72 Aligned_cols=121 Identities=18% Similarity=0.172 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc----cchhhh-----------------hcCCCCccccccch
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT----PLLAST-----------------CVGTLEFRSVAEPV 167 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~----~ll~~~-----------------~~g~~~~~~~~~~~ 167 (441)
..+|+|||||+||+++|..|++.|++|+|||+++.++.. .+.|.. ..|...........
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 358999999999999999999999999999999765321 111100 01111000000001
Q ss_pred hhh--------------hhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC
Q 013546 168 SRI--------------QTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG 233 (441)
Q Consensus 168 ~~~--------------~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ 233 (441)
..+ ...+.+..++.++.+.+..++. +.+.+...+ ++..++.||+||+|||+.|+.|+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~--~~~~v~~~~-------G~~~~~~~d~lviAtG~~p~~p~ 152 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETA--HSIRVNGLD-------GKQEMLETKKTIIATGSEPTELP 152 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEET--TEEEEEETT-------SCEEEEEEEEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC--CEEEEEecC-------CceEEEEcCEEEECCCCCcCCCC
Confidence 100 0011223468888887777765 455554321 11247899999999999999888
Q ss_pred CCCcc
Q 013546 234 IKGVK 238 (441)
Q Consensus 234 ipG~~ 238 (441)
+||.+
T Consensus 153 ~~g~~ 157 (468)
T 2qae_A 153 FLPFD 157 (468)
T ss_dssp TBCCC
T ss_pred CCCCC
Confidence 88864
No 50
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.81 E-value=7.1e-20 Score=164.39 Aligned_cols=166 Identities=16% Similarity=0.098 Sum_probs=111.9
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCccccc-chhhhhcCC---CCccccccchhhhhhhhcCCCCEEEEEE
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTP-LLASTCVGT---LEFRSVAEPVSRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~-ll~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (441)
.+|+|||||++|+++|..|++.|.+|+|||+.+...... .+... .+. ....++...+.+. +. ..+++++.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~---~~-~~gv~v~~~ 76 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNY-PGLLDEPSGEELLRRLEAH---AR-RYGAEVRPG 76 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCS-TTCTTCCCHHHHHHHHHHH---HH-HTTCEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhcc-CCCcCCCCHHHHHHHHHHH---HH-HcCCEEEeC
Confidence 479999999999999999999999999999987433110 00000 011 0011111222221 22 346777777
Q ss_pred EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhccccc
Q 013546 186 SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSE 265 (441)
Q Consensus 186 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~ 265 (441)
+|++++.+.+.+.+...+ .++++|+||+|+|..|+.+...|.
T Consensus 77 ~v~~i~~~~~~~~v~~~~----------g~i~ad~vI~A~G~~~~~~~~~g~---------------------------- 118 (180)
T 2ywl_A 77 VVKGVRDMGGVFEVETEE----------GVEKAERLLLCTHKDPTLPSLLGL---------------------------- 118 (180)
T ss_dssp CCCEEEECSSSEEEECSS----------CEEEEEEEEECCTTCCHHHHHHTC----------------------------
T ss_pred EEEEEEEcCCEEEEEECC----------CEEEECEEEECCCCCCCccccCCC----------------------------
Confidence 888887665545444321 168999999999988642111111
Q ss_pred CCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013546 266 NPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNK 345 (441)
Q Consensus 266 ~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~ 345 (441)
++ + . |.|.||+++|| +.|+|||+|||+.. .+++++.|++||+.+|.||..
T Consensus 119 -------~~------------~-~-g~i~vd~~~~t-~~~~i~a~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 119 -------TR------------R-G-AYIDTDEGGRT-SYPRVYAAGVARGK--------VPGHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp -------CE------------E-T-TEECCCTTCBC-SSTTEEECGGGGTC--------CSCCHHHHHHHHHHHHHHHHH
T ss_pred -------Cc------------c-C-ceEEeCCCCCc-CCCCEEEeecccCc--------chhhHHHHHHhHHHHHHHHHH
Confidence 00 0 0 77999999999 99999999999943 123899999999999999998
Q ss_pred Hhc
Q 013546 346 KIG 348 (441)
Q Consensus 346 ~l~ 348 (441)
.+.
T Consensus 169 ~~~ 171 (180)
T 2ywl_A 169 DLR 171 (180)
T ss_dssp HHH
T ss_pred Hhh
Confidence 886
No 51
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.80 E-value=8.5e-21 Score=195.92 Aligned_cols=44 Identities=45% Similarity=0.735 Sum_probs=40.6
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|.||+++|| +.|+|||+|||+. .++++..|++||+.+|+||.
T Consensus 289 G~i~vd~~~~t-~~~~IyA~GD~~~---------~~~~~~~A~~~g~~aa~~i~ 332 (464)
T 2a8x_A 289 KAIGVDDYMRT-NVGHIYAIGDVNG---------LLQLAHVAEAQGVVAAETIA 332 (464)
T ss_dssp SSBCCCTTSBC-SSTTEEECGGGGC---------SSCSHHHHHHHHHHHHHHHH
T ss_pred CCEeECcCCcc-CCCCEEEeECcCC---------CccCHHHHHHHHHHHHHHhc
Confidence 78999999999 9999999999992 36789999999999999997
No 52
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.80 E-value=1.7e-20 Score=193.82 Aligned_cols=120 Identities=16% Similarity=0.165 Sum_probs=74.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCccccc----chhhh-----------------hcCCCCccccccch
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTP----LLAST-----------------CVGTLEFRSVAEPV 167 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~----ll~~~-----------------~~g~~~~~~~~~~~ 167 (441)
.++|+|||||++|+++|..|++.|++|+|||+++.++... +.|.. ..|.. ........
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 84 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVK-VSNVEIDL 84 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEE-ESCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcc-cCCCccCH
Confidence 5689999999999999999999999999999997653210 11100 00110 00000011
Q ss_pred hhh--------------hhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC
Q 013546 168 SRI--------------QTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG 233 (441)
Q Consensus 168 ~~~--------------~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ 233 (441)
..+ ...+.+..++.++.+.++.++. +.+.+...+ ++..++.||+||+|||+.|..|+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~~~v~~~~-------G~~~~i~~d~lIiAtGs~p~~p~ 155 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSP--SEISVDTIE-------GENTVVKGKHIIIATGSDVKSLP 155 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEET--TEEEECCSS-------SCCEEEECSEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEEEeCC-------CceEEEEcCEEEECCCCCCCCCC
Confidence 100 0111122467888877666664 455554311 11247899999999999999888
Q ss_pred CCCcc
Q 013546 234 IKGVK 238 (441)
Q Consensus 234 ipG~~ 238 (441)
++|.+
T Consensus 156 ~~g~~ 160 (470)
T 1dxl_A 156 GVTID 160 (470)
T ss_dssp TBCCC
T ss_pred CCCCC
Confidence 88864
No 53
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.80 E-value=1.2e-19 Score=176.48 Aligned_cols=117 Identities=13% Similarity=0.036 Sum_probs=74.6
Q ss_pred CcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCCcccccchhhh----hcCCCCccccccchhhhhhhhcCCCCEEEEE
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNHMVFTPLLAST----CVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~~~~~~ll~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
.+|+|||||++|+++|..|++.|+ +|+|||++. .+ ..+.... ..+.... .....+........+..++.++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~g-g~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~v~~~~ 78 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PG-GQITGSSEIENYPGVKEV-VSGLDFMQPWQEQCFRFGLKHEM 78 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TT-CGGGGCSCBCCSTTCCSC-BCHHHHHHHHHHHHHTTSCEEEC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CC-cccccccccccCCCCccc-CCHHHHHHHHHHHHHHcCCEEEE
Confidence 479999999999999999999999 999999963 21 1111000 0011000 00011111111112234677777
Q ss_pred EEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc
Q 013546 185 ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 185 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
++|.+++.+.+.+.+...+. .++.||+||+|+|+.|+.|++||.+
T Consensus 79 ~~v~~i~~~~~~~~v~~~~g---------~~~~~~~vv~AtG~~~~~~~~~g~~ 123 (311)
T 2q0l_A 79 TAVQRVSKKDSHFVILAEDG---------KTFEAKSVIIATGGSPKRTGIKGES 123 (311)
T ss_dssp SCEEEEEEETTEEEEEETTS---------CEEEEEEEEECCCEEECCCCCBTHH
T ss_pred EEEEEEEEcCCEEEEEEcCC---------CEEECCEEEECCCCCCCCCCCCChh
Confidence 88999988777555543211 3789999999999999999999864
No 54
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.80 E-value=4.8e-20 Score=191.72 Aligned_cols=44 Identities=25% Similarity=0.459 Sum_probs=40.7
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|.||++||| +.|+|||+|||+. .++++..|++||+.+|.||.
T Consensus 306 G~I~Vd~~~~t-~~~~IyA~GD~~~---------~~~l~~~A~~~g~~aa~~i~ 349 (490)
T 1fec_A 306 GAIKVDAYSKT-NVDNIYAIGDVTD---------RVMLTPVAINEGAAFVDTVF 349 (490)
T ss_dssp SCBCCCTTCBC-SSTTEEECGGGGC---------SCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCcc-CCCCEEEEeccCC---------CccCHHHHHHHHHHHHHHhc
Confidence 78999999999 9999999999992 36799999999999999997
No 55
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.80 E-value=2.3e-20 Score=194.44 Aligned_cols=121 Identities=17% Similarity=0.135 Sum_probs=74.6
Q ss_pred CcEEEECCCHHHHHHHHhhccC---CCeEEEEcCCCCcccc----cchhhh----------------hcCCCC-cccccc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK---IYDAVCISPRNHMVFT----PLLAST----------------CVGTLE-FRSVAE 165 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~---g~~Vtvie~~~~~~~~----~ll~~~----------------~~g~~~-~~~~~~ 165 (441)
.+|+|||||++|+++|..|++. |++|+|||+++ ++.. .+.|.. ..|... ......
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 5899999999999999999998 99999999987 3211 011100 001110 000001
Q ss_pred chhhh--------------hhhhcCCCCEEEEEEEEEEEeCC----CCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCC
Q 013546 166 PVSRI--------------QTSLSSDPNSYFYLASCIGIDTD----KHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGA 227 (441)
Q Consensus 166 ~~~~~--------------~~~~~~~~~v~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs 227 (441)
....+ ...+.+..++.++.+.+..++.. .+.+.+...+ ++...+.||+||+|||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~-------g~~~~~~~d~lviATGs 154 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAAD-------GSTSEHEADVVLVATGA 154 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTT-------SCEEEEEESEEEECCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCC-------CcEEEEEeCEEEEcCCC
Confidence 11110 01122235788888888877762 2556554321 11136899999999999
Q ss_pred CcCCCCCCCcc
Q 013546 228 EPLTFGIKGVK 238 (441)
Q Consensus 228 ~p~~~~ipG~~ 238 (441)
.|..|++||.+
T Consensus 155 ~p~~p~i~g~~ 165 (499)
T 1xdi_A 155 SPRILPSAQPD 165 (499)
T ss_dssp EECCCGGGCCC
T ss_pred CCCCCCCCCCC
Confidence 99988888864
No 56
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.80 E-value=6.6e-20 Score=190.24 Aligned_cols=45 Identities=33% Similarity=0.475 Sum_probs=41.0
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|.||+++|| +.|+|||+|||+. | .|.+++.|+.||+++|+||.
T Consensus 306 G~i~vd~~~~t-~~~~IyA~GD~~~-----~---~~~~~~~A~~~g~~aa~~i~ 350 (483)
T 3dgh_A 306 DKIPVDSQEAT-NVANIYAVGDIIY-----G---KPELTPVAVLAGRLLARRLY 350 (483)
T ss_dssp TBBCCCTTCBC-SSTTEEECSTTBT-----T---SCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEECcCCcc-CCCCEEEEEcccC-----C---CCccHHHHHHHHHHHHHHHc
Confidence 78999999999 9999999999982 2 47899999999999999997
No 57
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.80 E-value=8.9e-20 Score=189.14 Aligned_cols=44 Identities=32% Similarity=0.490 Sum_probs=40.4
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|.||+++|| +.|+|||+|||+ + .|.++..|++||+.+|+||.
T Consensus 302 G~i~vd~~~~t-~~~~IyA~GD~~------~---~~~~~~~A~~~g~~aa~~i~ 345 (479)
T 2hqm_A 302 DQIIADEYQNT-NVPNIYSLGDVV------G---KVELTPVAIAAGRKLSNRLF 345 (479)
T ss_dssp SCBCCCTTCBC-SSTTEEECGGGT------T---SSCCHHHHHHHHHHHHHHHH
T ss_pred CCEeECCCCcc-CCCCEEEEEecC------C---CcccHHHHHHHHHHHHHHhc
Confidence 78999999999 999999999998 2 36789999999999999997
No 58
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.79 E-value=5.2e-19 Score=185.50 Aligned_cols=190 Identities=17% Similarity=0.119 Sum_probs=129.6
Q ss_pred cCcCCCCcCCCcccCccchhhhhcccccccccCCCCCCCCCCCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 65 SSWSRGIKTTPHYQYHNAERIVEESESEYQELSYPGLEATKPGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 65 ~~c~~~~~~~~~~~~~~~e~~i~~~~~~~~~~~~~~~~~~~~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
+|+++|.. |+. .....+.++++ +....+.++ |++++|||||++|+++|..+++.|.+|||+++.. +
T Consensus 192 ATGs~P~~-P~~-~~~~~~~~~ts----~~~l~l~~l-------P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~-~ 257 (542)
T 4b1b_A 192 ATGCRPHI-PDD-VEGAKELSITS----DDIFSLKKD-------PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI-V 257 (542)
T ss_dssp CCCEEECC-CSS-SBTHHHHCBCH----HHHTTCSSC-------CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC-S
T ss_pred ccCCCCCC-CCc-ccCCCccccCc----hhhhccccC-------CceEEEECCCHHHHHHHHHHHhcCCeEEEecccc-c
Confidence 67777743 322 22223455665 444566665 7899999999999999999999999999998754 2
Q ss_pred ccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEE
Q 013546 145 VFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVI 223 (441)
Q Consensus 145 ~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~Lvl 223 (441)
+ ...+.++...+.+. +. ..++.+..+ .+..++...+.+.+...+. .++.+|.|++
T Consensus 258 L-----------~~~D~ei~~~l~~~---l~-~~gi~~~~~~~v~~~~~~~~~~~v~~~~~---------~~~~~D~vLv 313 (542)
T 4b1b_A 258 L-----------RGFDQQCAVKVKLY---ME-EQGVMFKNGILPKKLTKMDDKILVEFSDK---------TSELYDTVLY 313 (542)
T ss_dssp S-----------TTSCHHHHHHHHHH---HH-HTTCEEEETCCEEEEEEETTEEEEEETTS---------CEEEESEEEE
T ss_pred c-----------cccchhHHHHHHHH---HH-hhcceeecceEEEEEEecCCeEEEEEcCC---------CeEEEEEEEE
Confidence 2 11222333334433 33 346676665 6777777777777665322 3678999999
Q ss_pred cCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCC
Q 013546 224 AAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPS 303 (441)
Q Consensus 224 AtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~ 303 (441)
|+|.+||+..+.- +.++ +++. ...+.|.||+++|| +
T Consensus 314 AvGR~Pnt~~L~l-------------------------e~~g------v~~~------------~~~~~i~vd~~~~T-s 349 (542)
T 4b1b_A 314 AIGRKGDIDGLNL-------------------------ESLN------MNVN------------KSNNKIIADHLSCT-N 349 (542)
T ss_dssp CSCEEESCGGGCG-------------------------GGTT------CCEE------------TTTTEECCCTTSBC-S
T ss_pred cccccCCccccCc-------------------------ccce------eeec------------ccCceEeccccccc-c
Confidence 9999998753211 0000 1111 11144689999999 9
Q ss_pred CCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 304 VEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 304 ~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
.|+|||+|||+ + ..|++++.|..||+++|+||.
T Consensus 350 ~p~IyAiGDv~------~--~~p~La~~A~~eg~~aa~~i~ 382 (542)
T 4b1b_A 350 IPSIFAVGDVA------E--NVPELAPVAIKAGEILARRLF 382 (542)
T ss_dssp STTEEECTTSB------T--TCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEecccc------C--CchhHHHHHHHHHHHHHHHHh
Confidence 99999999998 2 257899999999999999998
No 59
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.79 E-value=2.2e-19 Score=178.72 Aligned_cols=224 Identities=14% Similarity=0.102 Sum_probs=125.6
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccc--hhhh-hcCCCCcccc-ccch-hhhhhhhcCCCCEEE
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPL--LAST-CVGTLEFRSV-AEPV-SRIQTSLSSDPNSYF 182 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~l--l~~~-~~g~~~~~~~-~~~~-~~~~~~~~~~~~v~~ 182 (441)
+.++|+|||||++|+++|..|++.|++|+|||+.+.++.... .+.. .........+ ...+ ..+.+.+. ..++.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~ 91 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAE-RYNPDV 91 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHH-TTCCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHH-HhCCEE
Confidence 356899999999999999999999999999999876542110 0000 0000000000 0111 11112122 234555
Q ss_pred EE-EEEEEEeCCCC-EEEEEecCCCCCCCCCCcceeeCCEEEEcCCC---CcCCCCCCC-ccc----cccc-ccCHhHH-
Q 013546 183 YL-ASCIGIDTDKH-EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGA---EPLTFGIKG-VKE----NAYF-LREVNHA- 250 (441)
Q Consensus 183 ~~-~~v~~id~~~~-~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs---~p~~~~ipG-~~~----~~~~-l~~~~~a- 250 (441)
.. .+|+.++.+.+ .+.+...+ ..++.||+||+|+|+ .|+.+++|| .++ .++. ++...+.
T Consensus 92 ~~~~~v~~i~~~~~~~~~v~~~~---------g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~~~ 162 (360)
T 3ab1_A 92 VLNETVTKYTKLDDGTFETRTNT---------GNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFK 162 (360)
T ss_dssp ECSCCEEEEEECTTSCEEEEETT---------SCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGGGGT
T ss_pred EcCCEEEEEEECCCceEEEEECC---------CcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHHHcC
Confidence 44 47888887654 44444321 137899999999998 577777888 432 1211 2232211
Q ss_pred -------------HHHHHHHHH-h--cccccC--------------------------CC------------CceeEee-
Q 013546 251 -------------QEIRKKLLL-N--LMLSEN--------------------------PG------------DTVQLFS- 275 (441)
Q Consensus 251 -------------~~~~~~i~~-~--~~~a~~--------------------------~G------------~~~vE~a- 275 (441)
.++-..+.. . +.+... .+ ..++++.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~ 242 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRS 242 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCSHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCHHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEe
Confidence 111111000 0 000000 00 0011111
Q ss_pred -Cc--eEEE----Ec-----------cCCccc--CCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHH
Q 013546 276 -KY--FVIT----IT-----------LSFLVR--LSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQ 335 (441)
Q Consensus 276 -~~--v~V~----il-----------~~~~~~--lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~q 335 (441)
++ ..+. ++ ..++.. -|+|.||+++|| ++|+|||+|||+.++ ..++++..|+.|
T Consensus 243 ~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~------~~~~~~~~A~~~ 315 (360)
T 3ab1_A 243 SDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKT-SVDGLYAAGDIAYYP------GKLKIIQTGLSE 315 (360)
T ss_dssp TTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBC-SSTTEEECSTTEECT------TCCCSHHHHHHH
T ss_pred cCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcC-CCCCEEEecCccCCC------CccceeehhHHH
Confidence 11 0111 11 000000 178999999999 999999999999653 136899999999
Q ss_pred HHHHHHHHHHHhc
Q 013546 336 GKYLAELFNKKIG 348 (441)
Q Consensus 336 g~~aA~nI~~~l~ 348 (441)
|+.+|.||.+.|.
T Consensus 316 g~~aa~~i~~~l~ 328 (360)
T 3ab1_A 316 ATMAVRHSLSYIK 328 (360)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHhhcC
Confidence 9999999999886
No 60
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.79 E-value=3.8e-20 Score=191.77 Aligned_cols=117 Identities=15% Similarity=0.117 Sum_probs=74.4
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhh----------------h-----hcCCCC------c
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLAS----------------T-----CVGTLE------F 160 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~----------------~-----~~g~~~------~ 160 (441)
..++|+||||||+|+++|..|++.|++|+|||++. ++ ..+++. . ..|... .
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~G-G~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LG-GTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TT-HHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CC-CcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 35799999999999999999999999999999764 22 111110 0 001100 0
Q ss_pred cccccc-------hhhhhhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC-
Q 013546 161 RSVAEP-------VSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF- 232 (441)
Q Consensus 161 ~~~~~~-------~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~- 232 (441)
..+... +........+..++.++.+.+..++.....+.. + ..++.||+||||||+.|..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~-~-----------g~~~~~d~lviAtG~~p~~p~ 164 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEV-S-----------GKKYTAPHILIATGGMPSTPH 164 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEE-T-----------TEEEECSCEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEE-C-----------CEEEEeeEEEEccCCCCCCCC
Confidence 000000 000011112235788888888877766655542 1 13789999999999999998
Q ss_pred --CCCCcc
Q 013546 233 --GIKGVK 238 (441)
Q Consensus 233 --~ipG~~ 238 (441)
++||.+
T Consensus 165 ~~~i~G~~ 172 (478)
T 3dk9_A 165 ESQIPGAS 172 (478)
T ss_dssp TTTSTTGG
T ss_pred cCCCCCCc
Confidence 899954
No 61
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.79 E-value=8.5e-20 Score=189.41 Aligned_cols=44 Identities=36% Similarity=0.539 Sum_probs=40.5
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|+|.||++||| +.|+|||+|||+. .|+++..|++||+++|+||.
T Consensus 304 G~i~vd~~~~t-~~~~IyA~GD~~~---------~~~l~~~A~~~g~~aa~~i~ 347 (482)
T 1ojt_A 304 GFIEVDKQMRT-NVPHIYAIGDIVG---------QPMLAHKAVHEGHVAAENCA 347 (482)
T ss_dssp SCCCCCTTSBC-SSTTEEECGGGTC---------SSCCHHHHHHHHHHHHHHHT
T ss_pred CCEeeCCCccc-CCCCEEEEEcccC---------CCccHHHHHHHHHHHHHHHc
Confidence 77999999999 9999999999992 36789999999999999997
No 62
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.79 E-value=1.2e-19 Score=187.38 Aligned_cols=113 Identities=13% Similarity=0.149 Sum_probs=72.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccch-----hhh-----------h-----cCCCC------cc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLL-----AST-----------C-----VGTLE------FR 161 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll-----~~~-----------~-----~g~~~------~~ 161 (441)
..+|+|||||++|+++|..|++.|++|+|||+++ ++ ..++ |.. . .|... ..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~G-G~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LG-GTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TT-HHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CC-CcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 4689999999999999999999999999999984 32 1111 100 0 01110 00
Q ss_pred ccccchh----hh---hhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCC
Q 013546 162 SVAEPVS----RI---QTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGI 234 (441)
Q Consensus 162 ~~~~~~~----~~---~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~i 234 (441)
.+....+ ++ .....+..++.++.+++..++. +.|.+ ++ .++.||+||||||+.|..|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~-~g-----------~~~~~d~lviAtGs~p~~p~i 147 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDA--HTIEV-EG-----------QRLSADHIVIATGGRPIVPRL 147 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEE-TT-----------EEEEEEEEEECCCEEECCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccC--CEEEE-CC-----------EEEEcCEEEECCCCCCCCCCC
Confidence 0000000 00 0001123578888888777764 56665 21 368999999999999999999
Q ss_pred CCc
Q 013546 235 KGV 237 (441)
Q Consensus 235 pG~ 237 (441)
||.
T Consensus 148 ~G~ 150 (463)
T 2r9z_A 148 PGA 150 (463)
T ss_dssp TTG
T ss_pred CCc
Confidence 997
No 63
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.78 E-value=2e-20 Score=199.15 Aligned_cols=168 Identities=18% Similarity=0.124 Sum_probs=98.0
Q ss_pred CCccccccccCCCcccCCCcccccccccCcCCCCcC-CCcccCccchhhhhcccccccccCCCCCCCCCCCCCCcEEEEC
Q 013546 38 FSPSLENVSRNSSLSYLPSSIRMTTHMSSWSRGIKT-TPHYQYHNAERIVEESESEYQELSYPGLEATKPGEKPRVVVLG 116 (441)
Q Consensus 38 ~~~a~~~~~~~~~~~~~~grvcp~~ce~~c~~~~~~-~~~~~~~~~e~~i~~~~~~~~~~~~~~~~~~~~~~~k~VvIIG 116 (441)
+.++++.+...+++|.+ . |...|+.|... .....++.+++++.+. ...++|+|||
T Consensus 59 ~~~~l~~~~g~~tvP~v---~----i~g~~igG~~~l~~~~~~g~L~~~l~~~-----------------~~~~dvvVIG 114 (598)
T 2x8g_A 59 IQKCLASFSKIETVPQM---F----VRGKFIGDSQTVLKYYSNDELAGIVNES-----------------KYDYDLIVIG 114 (598)
T ss_dssp HHHHTHHHHSCCCSCEE---E----ETTEEEECHHHHHHHHHTTCHHHHHHCC-----------------SSSEEEEEEC
T ss_pred HHHHHHHHhCCceeCEE---E----ECCEEEEeeehhhhhhhcCcchhhcccc-----------------cccccEEEEC
Confidence 66777777788899986 2 33333333210 1223455566666541 1256899999
Q ss_pred CCHHHHHHHHhhccCCCeEEEEcCC-CCc-----cccc------chhhhh----------------cCCCCccc-cccch
Q 013546 117 TGWGACRFLKGIDTKIYDAVCISPR-NHM-----VFTP------LLASTC----------------VGTLEFRS-VAEPV 167 (441)
Q Consensus 117 gG~aGl~aA~~L~~~g~~Vtvie~~-~~~-----~~~~------ll~~~~----------------~g~~~~~~-~~~~~ 167 (441)
|||||+++|..|++.|++|+|||+. +.. .+.+ +.|... .|...... .....
T Consensus 115 ~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 194 (598)
T 2x8g_A 115 GGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLDRSKISHNW 194 (598)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGCCCCH
T ss_pred CCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccccCCcCccCH
Confidence 9999999999999999999999973 210 0111 111100 01110000 01111
Q ss_pred hh-------hhh-------hhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC
Q 013546 168 SR-------IQT-------SLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG 233 (441)
Q Consensus 168 ~~-------~~~-------~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ 233 (441)
.. ... ...+..++.++.+.+..++. +.+.+...+ ++..++.||+||||||++|+.|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~--~~v~v~~~~-------g~~~~~~~d~lviAtGs~p~~p~ 265 (598)
T 2x8g_A 195 STMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISP--HEVQITDKN-------QKVSTITGNKIILATGERPKYPE 265 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET--TEEEEECTT-------CCEEEEEEEEEEECCCEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCC--CEEEEEeCC-------CCeEEEEeCEEEEeCCCCCCCCC
Confidence 11 000 01123478888777777765 345554321 11236899999999999999999
Q ss_pred CCCcc
Q 013546 234 IKGVK 238 (441)
Q Consensus 234 ipG~~ 238 (441)
+||.+
T Consensus 266 i~G~~ 270 (598)
T 2x8g_A 266 IPGAV 270 (598)
T ss_dssp STTHH
T ss_pred CCCcc
Confidence 99964
No 64
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.78 E-value=6.3e-19 Score=171.33 Aligned_cols=117 Identities=11% Similarity=-0.005 Sum_probs=72.0
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCccc--ccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-E
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVF--TPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-S 186 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~--~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 186 (441)
.+|+||||||+|+++|..|++.|++|+|||+...-.+ ...++... +.... ....+.+......+..++.++.+ +
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~ 78 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYI-SVPKT--EGQKLAGALKVHVDEYDVDVIDSQS 78 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBT-TBSSE--EHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceecccccccccc-CcCCC--CHHHHHHHHHHHHHHcCCeEEccCE
Confidence 3799999999999999999999999999986421000 00000000 00000 00111111111223457888877 8
Q ss_pred EEEEeCCCC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc
Q 013546 187 CIGIDTDKH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 187 v~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
|+.++.+.+ .+.+...+ ..++.||+||+|+|+.|+.|++||.+
T Consensus 79 v~~i~~~~~~~~~~~v~~~~---------g~~~~~~~lv~AtG~~~~~~~~~g~~ 124 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETAS---------GAVLKARSIIVATGAKWRNMNVPGED 124 (310)
T ss_dssp EEEEECCSSTTCCEEEEETT---------SCEEEEEEEEECCCEEECCCCCTTTT
T ss_pred EEEEEecccCCceEEEEECC---------CCEEEeCEEEECcCCCcCCCCCCChh
Confidence 999976532 33333211 13689999999999999888899874
No 65
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.78 E-value=1.2e-19 Score=179.15 Aligned_cols=120 Identities=13% Similarity=-0.038 Sum_probs=75.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc------------cchhhhhcCCCCc-cc-cc---cchhhhh
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT------------PLLASTCVGTLEF-RS-VA---EPVSRIQ 171 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~------------~ll~~~~~g~~~~-~~-~~---~~~~~~~ 171 (441)
..+|+|||||++|+++|..|++.|++|+|||+++.++-. +.......+.... .. .. ..+....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 458999999999999999999999999999999765311 0000000010000 00 00 1111111
Q ss_pred hhhcCCCCEEEEE-EEEEEEeCCCCEEE-EEecCCCCCCCCCCcceeeCCEEEEcCCC--CcCCCCCCCcc
Q 013546 172 TSLSSDPNSYFYL-ASCIGIDTDKHEVY-CETVNNGKLSHEPHQFKVAYDKLVIAAGA--EPLTFGIKGVK 238 (441)
Q Consensus 172 ~~~~~~~~v~~~~-~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~i~yD~LvlAtGs--~p~~~~ipG~~ 238 (441)
..+.+..++.+.. .+|++++.+.+.+. +...+ .++.||+||+|+|. .|+.|++||.+
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~----------g~~~~d~vV~AtG~~~~~~~~~~~g~~ 143 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVARDG----------RQWLARAVISATGTWGEAYTPEYQGLE 143 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEETTS----------CEEEEEEEEECCCSGGGBCCCCCTTGG
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCC----------CEEEeCEEEECCCCCCCCCCCCCCCcc
Confidence 1122223555544 48899988888766 55421 27899999999994 67788899865
No 66
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.78 E-value=2.7e-19 Score=176.33 Aligned_cols=116 Identities=10% Similarity=0.094 Sum_probs=72.9
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhh----hcCC---CCccccccchhhhhhhhcCCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLAST----CVGT---LEFRSVAEPVSRIQTSLSSDPN 179 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~----~~g~---~~~~~~~~~~~~~~~~~~~~~~ 179 (441)
++.++|+|||||++|+++|..|++.|++|+|||+.. .+ ..+.... ..+. ....++...+.+ ..+..+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~ 85 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FG-GALMTTTDVENYPGFRNGITGPELMDEMRE----QALRFG 85 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CS-CGGGSCSCBCCSTTCTTCBCHHHHHHHHHH----HHHHTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CC-CceeccchhhhcCCCCCCCCHHHHHHHHHH----HHHHcC
Confidence 345799999999999999999999999999999752 21 1111000 0000 000111111111 122246
Q ss_pred EEEEEEEEEEEeCCCCEEEE-EecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc
Q 013546 180 SYFYLASCIGIDTDKHEVYC-ETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 180 v~~~~~~v~~id~~~~~v~~-~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
+.++.+.+.+++. .+.+.+ ...+ ..++.||+||+|+|+.|+.|++||.+
T Consensus 86 v~~~~~~v~~i~~-~~~~~v~~~~~---------g~~~~~d~lviAtG~~~~~~~i~g~~ 135 (335)
T 2a87_A 86 ADLRMEDVESVSL-HGPLKSVVTAD---------GQTHRARAVILAMGAAARYLQVPGEQ 135 (335)
T ss_dssp CEEECCCEEEEEC-SSSSEEEEETT---------SCEEEEEEEEECCCEEECCCCCTHHH
T ss_pred CEEEEeeEEEEEe-CCcEEEEEeCC---------CCEEEeCEEEECCCCCccCCCCCchH
Confidence 7777777888887 333333 2211 13789999999999999999999864
No 67
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.77 E-value=3e-19 Score=174.27 Aligned_cols=118 Identities=13% Similarity=0.099 Sum_probs=74.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhh-hcCCCCc-cccc-cchhhhhhhhcCCCCEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLAST-CVGTLEF-RSVA-EPVSRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~-~~g~~~~-~~~~-~~~~~~~~~~~~~~~v~~~~~ 185 (441)
.++|+|||||++|+++|..|++.|++|+|||+.. .. ..+.... ....+.. ..+. ..+........+..++.++.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KG-GQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFD 82 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TT-GGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CC-ceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 5689999999999999999999999999999752 22 1111000 0000000 0000 011111111122346778778
Q ss_pred EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc
Q 013546 186 SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 186 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
+++.++.+.+.+.+.. + ..++.||+||+|+|+.|+.|++||.+
T Consensus 83 ~v~~i~~~~~~~~v~~-~---------~~~~~~~~lv~AtG~~~~~~~~~g~~ 125 (320)
T 1trb_A 83 HINKVDLQNRPFRLNG-D---------NGEYTCDALIIATGASARYLGLPSEE 125 (320)
T ss_dssp CEEEEECSSSSEEEEE-S---------SCEEEEEEEEECCCEEECCCCCHHHH
T ss_pred eeeEEEecCCEEEEEe-C---------CCEEEcCEEEECCCCCcCCCCCCChH
Confidence 8999998777666521 1 13789999999999999988888864
No 68
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.77 E-value=6e-20 Score=199.68 Aligned_cols=84 Identities=10% Similarity=0.033 Sum_probs=53.3
Q ss_pred CCcccccccccCcCCC-CcCCCcccCccchhhhhcccccccccCCCCCCCCCCCCCCcEEEECCCHHHHHHHHhhccCCC
Q 013546 55 PSSIRMTTHMSSWSRG-IKTTPHYQYHNAERIVEESESEYQELSYPGLEATKPGEKPRVVVLGTGWGACRFLKGIDTKIY 133 (441)
Q Consensus 55 ~grvcp~~ce~~c~~~-~~~~~~~~~~~~e~~i~~~~~~~~~~~~~~~~~~~~~~~k~VvIIGgG~aGl~aA~~L~~~g~ 133 (441)
+.|.|+. |+. |... ....++ .+......+.. +.+ ..|.....++..++++|+||||||||+++|..|++.|+
T Consensus 341 ~~~~ci~-Cn~-C~~~~~~~~~~-~~C~~n~~~g~-e~~---~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~ 413 (729)
T 1o94_A 341 DIRVCIG-CNV-CISRWEIGGPP-MICTQNATAGE-EYR---RGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGY 413 (729)
T ss_dssp GCCCCCC-CCH-HHHHHHHSSSC-CCCSSCTTTTT-HHH---HCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred ccccccc-cch-hcccccccCCc-eeeccCccccc-ccc---ccccccccccccCCceEEEECCCHHHHHHHHHHHHCCC
Confidence 5688874 874 8754 222222 22233333221 111 12211111223457899999999999999999999999
Q ss_pred eEEEEcCCCCcc
Q 013546 134 DAVCISPRNHMV 145 (441)
Q Consensus 134 ~Vtvie~~~~~~ 145 (441)
+|||||++++++
T Consensus 414 ~Vtlie~~~~~G 425 (729)
T 1o94_A 414 TVHLTDTAEKIG 425 (729)
T ss_dssp EEEEECSSSSTT
T ss_pred eEEEEeCCCCcC
Confidence 999999998765
No 69
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.77 E-value=3.2e-19 Score=175.18 Aligned_cols=120 Identities=13% Similarity=0.104 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcC----CCCcccccchhhh-hcCCCCc-ccc-ccchhhhhhhhcCCCCEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISP----RNHMVFTPLLAST-CVGTLEF-RSV-AEPVSRIQTSLSSDPNSY 181 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~----~~~~~~~~ll~~~-~~g~~~~-~~~-~~~~~~~~~~~~~~~~v~ 181 (441)
.++|+|||||++|+++|..|++.|++|+|||+ ..... ..+.... ....+.. ..+ ...+........+..++.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 86 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPG-GQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTT 86 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT-CGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCC-ceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCE
Confidence 46899999999999999999999999999998 32221 1111000 0000000 000 001111111112234677
Q ss_pred EEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCccc
Q 013546 182 FYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKE 239 (441)
Q Consensus 182 ~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~ 239 (441)
++.+++++++.+.+.+.+.. + + .++.||+||+|+|+.|..|++||.++
T Consensus 87 ~~~~~v~~i~~~~~~~~v~~-~-~--------~~~~~~~vv~A~G~~~~~~~~~g~~~ 134 (333)
T 1vdc_A 87 IFTETVTKVDFSSKPFKLFT-D-S--------KAILADAVILAIGAVAKRLSFVGSGE 134 (333)
T ss_dssp EECCCCCEEECSSSSEEEEC-S-S--------EEEEEEEEEECCCEEECCCCCBTCSS
T ss_pred EEEeEEEEEEEcCCEEEEEE-C-C--------cEEEcCEEEECCCCCcCCCCCCCccc
Confidence 77777889988776554443 1 1 37899999999999999888988754
No 70
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.77 E-value=2.7e-19 Score=185.66 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=71.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccch-----hhh----------------hcCCC------Ccc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLL-----AST----------------CVGTL------EFR 161 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll-----~~~----------------~~g~~------~~~ 161 (441)
..+|+|||||++|+++|..|++.|++|+|||+. .++ ..++ |.. ..|.. +..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~G-G~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIG-GTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTT-HHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCC-CceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 358999999999999999999999999999994 332 1111 100 00110 000
Q ss_pred ccc-------cchhhhhhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcC-CCC
Q 013546 162 SVA-------EPVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPL-TFG 233 (441)
Q Consensus 162 ~~~-------~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~-~~~ 233 (441)
.+. ..+......+.+..++.++.+.+..++. +.+.+.. + ...+.||+||||||+.|. .|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~v~~--~--------~~~~~~d~lviAtG~~p~~~p~ 171 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDE--HTLELSV--T--------GERISAEKILIATGAKIVSNSA 171 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEETT--T--------CCEEEEEEEEECCCEEECCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEec--C--------CeEEEeCEEEEccCCCcccCCC
Confidence 000 0011111111223578888888888874 4565531 1 137899999999999998 888
Q ss_pred CCCcc
Q 013546 234 IKGVK 238 (441)
Q Consensus 234 ipG~~ 238 (441)
+||.+
T Consensus 172 i~G~~ 176 (484)
T 3o0h_A 172 IKGSD 176 (484)
T ss_dssp CBTGG
T ss_pred CCCcc
Confidence 99864
No 71
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.72 E-value=6.5e-18 Score=176.94 Aligned_cols=217 Identities=15% Similarity=0.084 Sum_probs=123.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCc---c-ccccchhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEF---R-SVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~---~-~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
..+|+||||||||+++|..|++.|++|+|||+.. + +..... .+.... . .....+........+..++.++.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~--G--G~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~ 286 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF--G--GQVLDT-VDIENYISVPKTEGQKLAGALKAHVSDYDVDVID 286 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST--T--GGGTTC-SCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEEC
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC--C--Cccccc-ccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEc
Confidence 5689999999999999999999999999998742 1 111000 000000 0 00011111111122345788887
Q ss_pred E-EEEEEeCCCC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccc----cccccC----------
Q 013546 185 A-SCIGIDTDKH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKEN----AYFLRE---------- 246 (441)
Q Consensus 185 ~-~v~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~----~~~l~~---------- 246 (441)
+ +|..++.+.+ .+.+...+ + .++.||+||+|||+.|+.+++||.++. ++....
T Consensus 287 ~~~v~~i~~~~~~~~~~~V~~~~-g--------~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~ 357 (521)
T 1hyu_A 287 SQSASKLVPAATEGGLHQIETAS-G--------AVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKR 357 (521)
T ss_dssp SCCEEEEECCSSTTSCEEEEETT-S--------CEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSE
T ss_pred CCEEEEEEeccCCCceEEEEECC-C--------CEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchhhcCCCe
Confidence 7 8999976421 33333211 1 378999999999999988889986421 221111
Q ss_pred ----------HhHHHHHHHH------------------HHHhccc-ccC---C------------CCceeEeeC---c--
Q 013546 247 ----------VNHAQEIRKK------------------LLLNLML-SEN---P------------GDTVQLFSK---Y-- 277 (441)
Q Consensus 247 ----------~~~a~~~~~~------------------i~~~~~~-a~~---~------------G~~~vE~a~---~-- 277 (441)
++-|..+... +.+.+.. .+. . ...++.+.+ +
T Consensus 358 V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~ 437 (521)
T 1hyu_A 358 VAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDI 437 (521)
T ss_dssp EEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCSCHHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCE
T ss_pred EEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCcCHHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCce
Confidence 1112222111 0000000 000 0 001122211 0
Q ss_pred eEEE----E-----ccCC---c--cc---CCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHH
Q 013546 278 FVIT----I-----TLSF---L--VR---LSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLA 340 (441)
Q Consensus 278 v~V~----i-----l~~~---~--~~---lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA 340 (441)
..+. + .|.. . .. -|+|.||+++|| ++|+|||+|||+.. .++++..|+.||+.||
T Consensus 438 ~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~~~--------~~~~~~~A~~~g~~aa 508 (521)
T 1hyu_A 438 HSVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAKCET-SVKGVFAAGDCTTV--------PYKQIIIATGEGAKAS 508 (521)
T ss_dssp EEEECSEEEECCCEEESCGGGTTTSCBCTTSCBCCCTTCBC-SSTTEEECSTTBCC--------SSCCHHHHHHHHHHHH
T ss_pred EEEEcCEEEECcCCCCCchHHhhhhccCCCCcEEeCCCCCC-CCCCEEEeecccCC--------CcceeeehHHhHHHHH
Confidence 0111 1 1110 0 00 188999999999 99999999999943 2368999999999999
Q ss_pred HHHHHHhc
Q 013546 341 ELFNKKIG 348 (441)
Q Consensus 341 ~nI~~~l~ 348 (441)
.+|.++|.
T Consensus 509 ~~i~~~L~ 516 (521)
T 1hyu_A 509 LSAFDYLI 516 (521)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999986
No 72
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.70 E-value=1.3e-16 Score=164.73 Aligned_cols=163 Identities=24% Similarity=0.267 Sum_probs=113.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||++|+++|..|++.|.+|||+|+.+++. + . .+.++...+.+. +. ..++.++.+ .+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~--------~-~~~~~~~~l~~~---l~-~~gV~i~~~~~v 233 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL--P--------Q-GDPETAALLRRA---LE-KEGIRVRTKTKA 233 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--T--------T-SCHHHHHHHHHH---HH-HTTCEEECSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc--c--------c-cCHHHHHHHHHH---HH-hcCCEEEcCCEE
Confidence 5799999999999999999999999999999988654 1 1 111222223222 22 347777765 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++.+.+.+.+....+. .++..++++|.||+|+|.+|+...+ +.+ .. .+.
T Consensus 234 ~~i~~~~~~~~v~~~~~~----~g~~~~i~~D~vv~a~G~~p~~~~l-~l~-----------------~~--g~~----- 284 (464)
T 2eq6_A 234 VGYEKKKDGLHVRLEPAE----GGEGEEVVVDKVLVAVGRKPRTEGL-GLE-----------------KA--GVK----- 284 (464)
T ss_dssp EEEEEETTEEEEEEEETT----CCSCEEEEESEEEECSCEEESCTTS-SHH-----------------HH--TCC-----
T ss_pred EEEEEeCCEEEEEEeecC----CCceeEEEcCEEEECCCcccCCCCC-Chh-----------------hc--Cce-----
Confidence 888766555444321010 0122378999999999999886532 210 00 111
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
+ +.. |+|.||+++|| +.|+|||+|||+. .|+++..|++||+.+|+||.
T Consensus 285 ------~------------~~~-G~i~vd~~~~t-~~~~Iya~GD~~~---------~~~l~~~A~~~g~~aa~~i~ 332 (464)
T 2eq6_A 285 ------V------------DER-GFIRVNARMET-SVPGVYAIGDAAR---------PPLLAHKAMREGLIAAENAA 332 (464)
T ss_dssp ------B------------CTT-SCBCCCTTCBC-SSTTEEECGGGTC---------SSCCHHHHHHHHHHHHHHHT
T ss_pred ------e------------cCC-CCEEECCCccc-CCCCEEEEeccCC---------CcccHHHHHHHHHHHHHHhc
Confidence 1 111 78999999999 9999999999992 36789999999999999997
No 73
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.70 E-value=1.9e-16 Score=163.83 Aligned_cols=162 Identities=18% Similarity=0.238 Sum_probs=113.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++. + ..+ .++...+.+. +. ..++.++.+ .+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~--------~~~-~~~~~~l~~~---l~-~~gv~i~~~~~v 247 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG--A--------SMD-GEVAKATQKF---LK-KQGLDFKLSTKV 247 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--S--------SSC-HHHHHHHHHH---HH-HTTCEEECSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc--c--------ccC-HHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 5799999999999999999999999999999998654 1 111 1122223222 22 347777765 78
Q ss_pred EEEeC--CCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC--CCCcccccccccCHhHHHHHHHHHHHhccc
Q 013546 188 IGIDT--DKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG--IKGVKENAYFLREVNHAQEIRKKLLLNLML 263 (441)
Q Consensus 188 ~~id~--~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~--ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~ 263 (441)
.+++. +.+.+.+...+. ..++..++++|.||+|+|.+|+... ++.. .
T Consensus 248 ~~i~~~~~~~~~~v~~~~~----~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~----------------------g--- 298 (478)
T 1v59_A 248 ISAKRNDDKNVVEIVVEDT----KTNKQENLEAEVLLVAVGRRPYIAGLGAEKI----------------------G--- 298 (478)
T ss_dssp EEEEEETTTTEEEEEEEET----TTTEEEEEEESEEEECSCEEECCTTSCTTTT----------------------T---
T ss_pred EEEEEecCCCeEEEEEEEc----CCCCceEEECCEEEECCCCCcCCCCCCchhc----------------------C---
Confidence 88876 454443322100 0011247899999999999988652 1211 0
Q ss_pred ccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHH
Q 013546 264 SENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELF 343 (441)
Q Consensus 264 a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI 343 (441)
+++ +.. |+|.||++||| +.|+|||+|||+. .|++++.|++||+.+|+||
T Consensus 299 --------~~~------------~~~-G~i~vd~~~~t-~~~~IyA~GD~~~---------~~~~~~~A~~~g~~aa~~i 347 (478)
T 1v59_A 299 --------LEV------------DKR-GRLVIDDQFNS-KFPHIKVVGDVTF---------GPMLAHKAEEEGIAAVEML 347 (478)
T ss_dssp --------CCB------------CTT-SCBCCCTTSBC-SSTTEEECGGGSS---------SCCCHHHHHHHHHHHHHHH
T ss_pred --------cee------------CCC-CCEeECcCCcc-CCCCEEEeeccCC---------CcccHHHHHHHHHHHHHHH
Confidence 111 111 78999999999 9999999999992 3678999999999999999
Q ss_pred HH
Q 013546 344 NK 345 (441)
Q Consensus 344 ~~ 345 (441)
..
T Consensus 348 ~~ 349 (478)
T 1v59_A 348 KT 349 (478)
T ss_dssp HH
T ss_pred cC
Confidence 84
No 74
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.69 E-value=1.2e-16 Score=166.10 Aligned_cols=162 Identities=14% Similarity=0.117 Sum_probs=113.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE-EEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL-ASC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++. + . .+.++...+.+. +.+ . +.++. ..+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~--------~-~d~~~~~~l~~~---l~~-~-V~i~~~~~v 237 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA--N--------L-QDEEMKRYAEKT---FNE-E-FYFDAKARV 237 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT--T--------C-CCHHHHHHHHHH---HHT-T-SEEETTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--c--------c-CCHHHHHHHHHH---Hhh-C-cEEEECCEE
Confidence 6799999999999999999999999999999998654 1 1 111222223322 333 3 66654 477
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++.+++.+.+..... .+++.++++|.||+|+|.+|+...+. .+. +
T Consensus 238 ~~i~~~~~~v~v~~~~~-----~G~~~~i~~D~Vi~a~G~~p~~~~l~-l~~------------------------~--- 284 (492)
T 3ic9_A 238 ISTIEKEDAVEVIYFDK-----SGQKTTESFQYVLAATGRKANVDKLG-LEN------------------------T--- 284 (492)
T ss_dssp EEEEECSSSEEEEEECT-----TCCEEEEEESEEEECSCCEESCSSSC-GGG------------------------S---
T ss_pred EEEEEcCCEEEEEEEeC-----CCceEEEECCEEEEeeCCccCCCCCC-hhh------------------------c---
Confidence 88876655554443210 12234789999999999998765321 100 0
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeC-CCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVD-EWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNK 345 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd-~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~ 345 (441)
++++ +.. |+|.|| +++|| +.|+|||+|||+. .+++++.|+.||+.+|.||..
T Consensus 285 ---gl~~------------~~~-G~i~vd~~~~~t-~~~~IyA~GD~~~---------~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 285 ---SIEL------------DKK-NSPLFDELTLQT-SVDHIFVAGDANN---------TLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp ---CCCB------------CTT-CCBCCCTTTCBC-SSTTEEECGGGGT---------SSCSHHHHHHHHHHHHHHHHH
T ss_pred ---CCEE------------CCC-CCEeECcccccC-CCCCEEEEEecCC---------CCccHHHHHHHHHHHHHHHcC
Confidence 0111 111 789999 89999 9999999999992 467899999999999999985
No 75
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.68 E-value=1.6e-16 Score=163.76 Aligned_cols=157 Identities=24% Similarity=0.353 Sum_probs=111.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||++|+++|..|++.|.+|||+++.+++. +. .+.++...+.+. +. ..++.++.+ .+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~---l~-~~gv~i~~~~~v 235 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL--PT---------YDSELTAPVAES---LK-KLGIALHLGHSV 235 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--TT---------SCHHHHHHHHHH---HH-HHTCEEETTCEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc--cc---------cCHHHHHHHHHH---HH-HCCCEEEECCEE
Confidence 6799999999999999999999999999999998654 11 111122222222 22 246777654 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++. .+ +.+.. .+ +++.++++|.||+|+|.+|+.+.+ +.+..
T Consensus 236 ~~i~~-~~-v~v~~-~~------G~~~~i~~D~vv~a~G~~p~~~~l-~~~~~--------------------------- 278 (458)
T 1lvl_A 236 EGYEN-GC-LLAND-GK------GGQLRLEADRVLVAVGRRPRTKGF-NLECL--------------------------- 278 (458)
T ss_dssp EEEET-TE-EEEEC-SS------SCCCEECCSCEEECCCEEECCSSS-SGGGS---------------------------
T ss_pred EEEEe-CC-EEEEE-CC------CceEEEECCEEEECcCCCcCCCCC-CcHhc---------------------------
Confidence 88887 43 65552 11 122478999999999999987543 22100
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
| +++. . ++|.||++||| +.|+|||+|||+. .|+++..|.+||+.+|+||.
T Consensus 279 g---~~~~------------~--~~i~vd~~~~t-~~~~Iya~GD~~~---------~~~~~~~A~~~g~~aa~~i~ 328 (458)
T 1lvl_A 279 D---LKMN------------G--AAIAIDERCQT-SMHNVWAIGDVAG---------EPMLAHRAMAQGEMVAEIIA 328 (458)
T ss_dssp C---CCEE------------T--TEECCCTTCBC-SSTTEEECGGGGC---------SSCCHHHHHHHHHHHHHHHT
T ss_pred C---Cccc------------C--CEEeECCCCcC-CCCCEEEeeccCC---------CcccHHHHHHHHHHHHHHhc
Confidence 0 1111 1 15899999999 9999999999992 36789999999999999997
No 76
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.68 E-value=1.1e-17 Score=180.91 Aligned_cols=110 Identities=18% Similarity=0.204 Sum_probs=69.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (441)
...+++|+|||||+||+++|..|++.|++|+|||++++++..........+..+...+ .......+.+..++.+..+
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~gv~~~~~ 464 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRV---KEYREAVLAELPNVEIYRE 464 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHH---HHHHHHHHHTCTTEEEESS
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHH---HHHHHHHHHHcCCCEEEEC
Confidence 3457899999999999999999999999999999998776332222222222222221 1222222333235665443
Q ss_pred EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCc--------CCCCCCCcc
Q 013546 186 SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEP--------LTFGIKGVK 238 (441)
Q Consensus 186 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p--------~~~~ipG~~ 238 (441)
+ .+...+ ..++.||+||||||+.| ..|++||.+
T Consensus 465 ~---------~v~~~~-----------~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~ 505 (690)
T 3k30_A 465 S---------PMTGDD-----------IVEFGFEHVITATGATWRTDGVARFHTTALPIAE 505 (690)
T ss_dssp C---------CCCHHH-----------HHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCT
T ss_pred C---------eecHHH-----------HhhcCCCEEEEcCCCccccccccccCCCCCCCCC
Confidence 1 111111 13578999999999984 467788864
No 77
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.67 E-value=3e-16 Score=162.27 Aligned_cols=161 Identities=22% Similarity=0.302 Sum_probs=114.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+||++++.+++. + . .+.++...+.+. + +..++.++.+ .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~--------~-~~~~~~~~l~~~---l-~~~Gv~v~~~~~v 244 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL--P--------A-VDEQVAKEAQKI---L-TKQGLKILLGARV 244 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--T--------T-SCHHHHHHHHHH---H-HHTTEEEEETCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC--c--------c-cCHHHHHHHHHH---H-HhCCCEEEECCEE
Confidence 6799999999999999999999999999999988654 1 1 111222223332 2 2357887765 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++.+.+.+.+...+.+ + ..++++|.||+|+|.+|+...+.-. .
T Consensus 245 ~~i~~~~~~~~v~~~~~~-----g-~~~~~~D~vi~a~G~~p~~~~l~~~-~---------------------------- 289 (476)
T 3lad_A 245 TGTEVKNKQVTVKFVDAE-----G-EKSQAFDKLIVAVGRRPVTTDLLAA-D---------------------------- 289 (476)
T ss_dssp EEEEECSSCEEEEEESSS-----E-EEEEEESEEEECSCEEECCTTCCSS-C----------------------------
T ss_pred EEEEEcCCEEEEEEEeCC-----C-cEEEECCEEEEeeCCcccCCCCCcc-c----------------------------
Confidence 888766554444332111 1 2478999999999999876532110 0
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
.++++. .. |+|.||+++|| +.|+|||+|||+ ..|.++..|+.||+.+|+||.
T Consensus 290 --~g~~~~------------~~-G~i~vd~~~~t-~~~~Iya~GD~~---------~~~~~~~~A~~~g~~aa~~i~ 341 (476)
T 3lad_A 290 --SGVTLD------------ER-GFIYVDDYCAT-SVPGVYAIGDVV---------RGAMLAHKASEEGVVVAERIA 341 (476)
T ss_dssp --CSCCBC------------TT-SCBCCCTTSBC-SSTTEEECGGGS---------SSCCCHHHHHHHHHHHHHHHH
T ss_pred --cCcccc------------CC-CCEeeCCCccc-CCCCEEEEEccC---------CCcccHHHHHHHHHHHHHHhc
Confidence 001111 11 78999999999 999999999999 246799999999999999997
No 78
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.67 E-value=7.6e-16 Score=160.38 Aligned_cols=164 Identities=20% Similarity=0.245 Sum_probs=112.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++. + ..+ .++...+.+. +. ..++.++.+ .+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~--------~~d-~~~~~~l~~~---l~-~~gv~i~~~~~v 240 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL--R--------KFD-ESVINVLEND---MK-KNNINIVTFADV 240 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC--T--------TSC-HHHHHHHHHH---HH-HTTCEEECSCCE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC--c--------ccc-hhhHHHHHHH---HH-hCCCEEEECCEE
Confidence 5799999999999999999999999999999988654 1 111 1122222222 22 347777665 68
Q ss_pred EEEeCCC-CEEEEEecCCCCCCCCCCcce-eeCCEEEEcCCCCcCCCCC--CCcccccccccCHhHHHHHHHHHHHhccc
Q 013546 188 IGIDTDK-HEVYCETVNNGKLSHEPHQFK-VAYDKLVIAAGAEPLTFGI--KGVKENAYFLREVNHAQEIRKKLLLNLML 263 (441)
Q Consensus 188 ~~id~~~-~~v~~~~~~~~~~~~~~~~~~-i~yD~LvlAtGs~p~~~~i--pG~~~~~~~l~~~~~a~~~~~~i~~~~~~ 263 (441)
.+++.+. +.+.+...+ + .+ +++|.||+|+|.+|+...+ ...
T Consensus 241 ~~i~~~~~~~~~v~~~~-------g--~~~~~~D~vi~a~G~~p~~~~l~~~~~-------------------------- 285 (500)
T 1onf_A 241 VEIKKVSDKNLSIHLSD-------G--RIYEHFDHVIYCVGRSPDTENLKLEKL-------------------------- 285 (500)
T ss_dssp EEEEESSTTCEEEEETT-------S--CEEEEESEEEECCCBCCTTTTSSCTTT--------------------------
T ss_pred EEEEEcCCceEEEEECC-------C--cEEEECCEEEECCCCCcCCCCCCchhc--------------------------
Confidence 8887543 223333211 1 24 8999999999999886422 111
Q ss_pred ccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEeccccccccc------------------------
Q 013546 264 SENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQ------------------------ 319 (441)
Q Consensus 264 a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~------------------------ 319 (441)
++++ + -|+|.||+++|| +.|+|||+|||+.+++.
T Consensus 286 -------g~~~-~-------------~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (500)
T 1onf_A 286 -------NVET-N-------------NNYIVVDENQRT-SVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENV 343 (500)
T ss_dssp -------TCCB-S-------------SSCEEECTTCBC-SSSSEEECSTTEEEC--------------------------
T ss_pred -------Cccc-c-------------CCEEEECCCccc-CCCCEEEEecccccccccccccccccccccccccccccccc
Confidence 0111 0 178999999999 99999999999954310
Q ss_pred CC-CCCCCchHHHHHHHHHHHHHHHH
Q 013546 320 TG-KPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 320 ~G-~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
.+ ....++++..|++||+++|+||.
T Consensus 344 ~~~~~~~~~~~~~A~~~g~~aa~~i~ 369 (500)
T 1onf_A 344 TEDIFYNVQLTPVAINAGRLLADRLF 369 (500)
T ss_dssp ----CBCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccCCcccchhHHHHHHHHHHHHHh
Confidence 00 00257899999999999999997
No 79
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.67 E-value=3.2e-16 Score=161.22 Aligned_cols=159 Identities=20% Similarity=0.264 Sum_probs=114.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||++|+++|..|++.|.+||++|+.+++. +. ....+...+.+. +. ..++.++.+ +|
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l--~~---------~~~~~~~~l~~~---l~-~~Gv~i~~~~~V 231 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL--PT---------MDLEVSRAAERV---FK-KQGLTIRTGVRV 231 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--TT---------SCHHHHHHHHHH---HH-HHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--cc---------cCHHHHHHHHHH---HH-HCCCEEEECCEE
Confidence 5799999999999999999999999999999988654 10 111122222222 22 236777664 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
++++.+.+.+.+...+ ..++++|.||+|+|.+|+.+.+ +.+.- .+
T Consensus 232 ~~i~~~~~~v~v~~~~---------g~~i~~D~vv~A~G~~p~~~~l-~~~~~-------------------g~------ 276 (455)
T 2yqu_A 232 TAVVPEAKGARVELEG---------GEVLEADRVLVAVGRRPYTEGL-SLENA-------------------GL------ 276 (455)
T ss_dssp EEEEEETTEEEEEETT---------SCEEEESEEEECSCEEECCTTC-CGGGG-------------------TC------
T ss_pred EEEEEeCCEEEEEECC---------CeEEEcCEEEECcCCCcCCCCC-Chhhc-------------------CC------
Confidence 8888766666655421 1378999999999999887542 21100 00
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNK 345 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~ 345 (441)
++ +.. |+|.||+++|| +.|+|||+|||+. .++++..|.+||+.+|+||..
T Consensus 277 -----~~------------~~~-g~i~vd~~~~t-~~~~iya~GD~~~---------~~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 277 -----ST------------DER-GRIPVDEHLRT-RVPHIYAIGDVVR---------GPMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp -----CC------------CTT-SCCCCCTTSBC-SSTTEEECGGGSS---------SCCCHHHHHHHHHHHHHHHHH
T ss_pred -----cc------------CCC-CcEeECCCccc-CCCCEEEEecCCC---------CccCHHHHHHhHHHHHHHHcC
Confidence 00 111 77999999999 9999999999992 367899999999999999983
No 80
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.67 E-value=1.4e-17 Score=173.31 Aligned_cols=212 Identities=14% Similarity=0.107 Sum_probs=124.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhh-hhcCCCCccccccchhhhhhhhcCCCCEEEE-EEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLAS-TCVGTLEFRSVAEPVSRIQTSLSSDPNSYFY-LAS 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~ 186 (441)
.++|+|||||++|+++|..|++. ++|+|||+++++++...... ...|... ........+.+.+ ..++.+. ...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~--~~~~~~~~l~~~l--~~~v~~~~~~~ 182 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNK--DSRKVVEELVGKL--NENTKIYLETS 182 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTE--EHHHHHHHHHHTC--CTTEEEETTEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCC--CHHHHHHHHHHHH--hcCCEEEcCCE
Confidence 35899999999999999999999 99999999987754321100 0011110 0111112222222 3466654 457
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcc-cccccccCHhHHHHHHHHHH----Hhc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYFLREVNHAQEIRKKLL----LNL 261 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~l~~~~~a~~~~~~i~----~~~ 261 (441)
+.+++.+.+.+.+...+. ++...+.||+||||||+.|+.|++||.+ ++++.. .++..+.+... ..+
T Consensus 183 v~~i~~~~~~~~~~~~~~------~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~---~~~~~~~~~~~~~~~~~v 253 (493)
T 1y56_A 183 ALGVFDKGEYFLVPVVRG------DKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRR---DFALEVMNVWEVAPGRKV 253 (493)
T ss_dssp ECCCEECSSSEEEEEEET------TEEEEEEESCEEECCCEEECCCCCTTTTSTTEEEH---HHHHHHHHTSCBCSCSEE
T ss_pred EEEEEcCCcEEEEEEecC------CeEEEEECCEEEECCCCCccCCCCCCCCCCCEEEc---HHHHHHHHhcccCCCCEE
Confidence 888887766554432111 1123689999999999999998899875 344332 23322221100 001
Q ss_pred ccccCCCC-----------------------------ceeEeeCceEEE----Ec-----c------CCccc-----CCc
Q 013546 262 MLSENPGD-----------------------------TVQLFSKYFVIT----IT-----L------SFLVR-----LSQ 292 (441)
Q Consensus 262 ~~a~~~G~-----------------------------~~vE~a~~v~V~----il-----~------~~~~~-----lG~ 292 (441)
.+.+ +|. .++++.++..+. ++ + ..+.+ -|+
T Consensus 254 vViG-gG~~gle~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~ 332 (493)
T 1y56_A 254 AVTG-SKADEVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYY 332 (493)
T ss_dssp EEES-TTHHHHHHHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEE
T ss_pred EEEC-CCHHHHHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCce
Confidence 1111 111 112222211111 11 1 11110 156
Q ss_pred ee-eCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHh
Q 013546 293 IG-VDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNKKI 347 (441)
Q Consensus 293 I~-Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~l 347 (441)
|. ||+++| +.|+|||+|||+. +.++..|+.||+.+|.||...+
T Consensus 333 i~~vd~~~~--s~~~vya~GD~~~----------~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 333 SPVLDEYHR--IKDGIYVAGSAVS----------IKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EECCCTTSE--EETTEEECSTTTC----------CCCHHHHHHHHHHHHHHHHHHT
T ss_pred eeccccccC--cCCCEEEEeccCC----------ccCHHHHHHHHHHHHHHHHHHc
Confidence 76 899999 6899999999993 3578899999999999999876
No 81
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.67 E-value=5.3e-17 Score=161.50 Aligned_cols=116 Identities=13% Similarity=0.137 Sum_probs=68.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCCcc------------cccchhhhhcCCCCcc--------------
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNHMV------------FTPLLASTCVGTLEFR-------------- 161 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~~~------------~~~ll~~~~~g~~~~~-------------- 161 (441)
.++|+|||||++|+++|..|++.|+ +|+|||+++ ++ +.+.......|..+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 4589999999999999999999999 999999986 21 0111100111110000
Q ss_pred -ccc-cchhhhhhhhcCCCCEEEEEE-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCC
Q 013546 162 -SVA-EPVSRIQTSLSSDPNSYFYLA-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKG 236 (441)
Q Consensus 162 -~~~-~~~~~~~~~~~~~~~v~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG 236 (441)
... ..+......+.+..++.++.+ .|++++.+.+.+.+...+ .++.||+||+|+|+.+. |.+|+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~----------g~~~~d~vVlAtG~~~~-p~ip~ 149 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTT----------ETYHADYIFVATGDYNF-PKKPF 149 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESS----------CCEEEEEEEECCCSTTS-BCCCS
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCC----------CEEEeCEEEECCCCCCc-cCCCC
Confidence 000 011111111222346666655 688888765444444321 15899999999998754 45555
No 82
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.65 E-value=1.7e-16 Score=177.20 Aligned_cols=131 Identities=11% Similarity=0.126 Sum_probs=79.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhc-CCCCccccccchhhhhhhhcCCCCEEEEEE-E
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCV-GTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-S 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 186 (441)
.++|+||||||||+++|..|++.|++|+|||++++++.. ++ . +. ..+.............+.+.+..++.++.+ +
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~-~~-~-~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~ 204 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGT-LL-D-TAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTT 204 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGG-GG-G-SSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCce-ec-c-CCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 468999999999999999999999999999999876521 22 1 10 001110000111121222333347777654 7
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCC-------CCcceeeCCEEEEcCCCCcCCCCCCCcc-ccccc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHE-------PHQFKVAYDKLVIAAGAEPLTFGIKGVK-ENAYF 243 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~-------~~~~~i~yD~LvlAtGs~p~~~~ipG~~-~~~~~ 243 (441)
|.+++.+.....+..... ...+. ++..++.||+||||||+.|+.+++||.+ ++++.
T Consensus 205 V~~i~~~~~~~~v~~~~~-~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~ 268 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTV-HLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIML 268 (965)
T ss_dssp EEEEETTTEEEEEEECST-TCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEE
T ss_pred EEeeecCCceeeeEeecc-cccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEE
Confidence 888886654433332110 00110 1113689999999999999988999875 34443
No 83
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.63 E-value=3e-15 Score=154.36 Aligned_cols=157 Identities=16% Similarity=0.197 Sum_probs=111.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++++|||+|+.|+++|..|++.|.+|+++++.+++. + ..+ .++...+.+. + +..+++++.+ .|
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l--~--------~~~-~~~~~~l~~~---l-~~~Gv~i~~~~~v 234 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL--S--------RFD-QDMRRGLHAA---M-EEKGIRILCEDII 234 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--T--------TSC-HHHHHHHHHH---H-HHTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--c--------ccC-HHHHHHHHHH---H-HHCCCEEECCCEE
Confidence 6799999999999999999999999999999988654 1 111 1122222222 2 2357777764 78
Q ss_pred EEEeCCCCE-EEEE-ecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhccccc
Q 013546 188 IGIDTDKHE-VYCE-TVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSE 265 (441)
Q Consensus 188 ~~id~~~~~-v~~~-~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~ 265 (441)
.+++.+.+. +.+. ..+ + ++++|.||+|+|.+|+...+. .+. .
T Consensus 235 ~~i~~~~~~~~~v~~~~~-------g---~i~aD~Vv~a~G~~p~~~~l~-l~~------------------------~- 278 (463)
T 4dna_A 235 QSVSADADGRRVATTMKH-------G---EIVADQVMLALGRMPNTNGLG-LEA------------------------A- 278 (463)
T ss_dssp EEEEECTTSCEEEEESSS-------C---EEEESEEEECSCEEESCTTSS-TGG------------------------G-
T ss_pred EEEEEcCCCEEEEEEcCC-------C---eEEeCEEEEeeCcccCCCCCC-ccc------------------------c-
Confidence 888765332 3443 211 1 389999999999998765321 100 0
Q ss_pred CCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 266 NPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 266 ~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
++++ +.. |+|.||+++|| +.|+|||+|||+. .++++..|+.||+.+|+||.
T Consensus 279 -----g~~~------------~~~-G~i~vd~~~~t-~~~~iya~GD~~~---------~~~~~~~A~~~g~~aa~~i~ 329 (463)
T 4dna_A 279 -----GVRT------------NEL-GAIIVDAFSRT-STPGIYALGDVTD---------RVQLTPVAIHEAMCFIETEY 329 (463)
T ss_dssp -----TCCB------------CTT-SCBCCCTTCBC-SSTTEEECSGGGS---------SCCCHHHHHHHHHHHHHHHH
T ss_pred -----CceE------------CCC-CCEeECcCCCC-CCCCEEEEEecCC---------CCCChHHHHHHHHHHHHHHc
Confidence 0111 111 78999999998 9999999999992 46899999999999999998
No 84
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.62 E-value=3.5e-16 Score=161.48 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=33.2
Q ss_pred CcEEEECCCHHHHHHHHhhcc---CCCe---EEEEcCCCCcc
Q 013546 110 PRVVVLGTGWGACRFLKGIDT---KIYD---AVCISPRNHMV 145 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~---~g~~---Vtvie~~~~~~ 145 (441)
++|+|||||++|+++|..|++ .|++ |+|||+++.++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G 44 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG 44 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC
Confidence 689999999999999999999 9999 99999987653
No 85
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.62 E-value=1.2e-16 Score=172.30 Aligned_cols=105 Identities=17% Similarity=0.196 Sum_probs=68.7
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEE
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLAS 186 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (441)
.++++|+||||||||+++|..|++.|++|+|||+++++++...+.....+... ....+......+. ..+++++.++
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~gv~~~~~~ 446 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEE---FYETLRYYRRMIE-VTGVTLKLNH 446 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTT---HHHHHHHHHHHHH-HHTCEEEESC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHH---HHHHHHHHHHHHH-HcCCEEEeCc
Confidence 34679999999999999999999999999999999887644332222211111 1111111111122 2356665543
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCccee-eCCEEEEcCCCCcCCCCCCCcc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKV-AYDKLVIAAGAEPLTFGIKGVK 238 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i-~yD~LvlAtGs~p~~~~ipG~~ 238 (441)
.+. . ..+ .||+||||||++|+.|++||.+
T Consensus 447 ~v~-----------~------------~~~~~~d~lviAtG~~p~~~~i~G~~ 476 (671)
T 1ps9_A 447 TVT-----------A------------DQLQAFDETILASGIVPRTPPIDGID 476 (671)
T ss_dssp CCC-----------S------------SSSCCSSEEEECCCEEECCCCCBTTT
T ss_pred Eec-----------H------------HHhhcCCEEEEccCCCcCCCCCCCCC
Confidence 210 0 134 8999999999999999999975
No 86
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.61 E-value=4.5e-17 Score=169.58 Aligned_cols=112 Identities=10% Similarity=-0.007 Sum_probs=77.6
Q ss_pred CCCCCCCCCccccccccCCCcccCCCccccc---ccccCcCCCCcCCCcccCccchhhhhcccccccccC------CCCC
Q 013546 31 GLPTNKCFSPSLENVSRNSSLSYLPSSIRMT---THMSSWSRGIKTTPHYQYHNAERIVEESESEYQELS------YPGL 101 (441)
Q Consensus 31 ~~~~~~~~~~a~~~~~~~~~~~~~~grvcp~---~ce~~c~~~~~~~~~~~~~~~e~~i~~~~~~~~~~~------~~~~ 101 (441)
+..+++ +.+|++.+.++|+||++||||||+ +|+++|+++. .+++.+..+++++++...+....- ....
T Consensus 8 ~~~~~~-~~~a~~~~~~~~~~~~~~~rvc~~~~~l~~~~g~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (497)
T 2bry_A 8 HMASPA-STNPAHDHFETFVQAQLCQDVLSSFQGLCRALGVESG--GGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVY 84 (497)
T ss_dssp --------CCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTCCTT--CHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGG
T ss_pred hhcccc-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCCCC--CCcEeehhhHHHHHHHHHHHhhhhhhhhhccccc
Confidence 467889 999999999999999999999998 7999999974 334444456666555332211110 0001
Q ss_pred CCCCCCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 102 EATKPGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 102 ~~~~~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
........++|+|||||++|+++|..|++.|++|+|||+.+.+.
T Consensus 85 ~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g 128 (497)
T 2bry_A 85 QQGQACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS 128 (497)
T ss_dssp GGGTTTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC
T ss_pred cCccccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC
Confidence 11123346799999999999999999999999999999987653
No 87
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.60 E-value=5.3e-15 Score=138.43 Aligned_cols=213 Identities=15% Similarity=0.110 Sum_probs=111.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccc-----------cchhhh-hhhhcC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVA-----------EPVSRI-QTSLSS 176 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~-----------~~~~~~-~~~~~~ 176 (441)
..+|+|||||++|+++|..|++.|.+|+|||+.......++.+.. +......+. ..+... .+.+.+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~--~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPK--PPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCC--SCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccc--cccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999998321101100000 000000000 011111 122333
Q ss_pred CCCEEEEEEEEEEEeCCCCEE-EEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHH
Q 013546 177 DPNSYFYLASCIGIDTDKHEV-YCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRK 255 (441)
Q Consensus 177 ~~~v~~~~~~v~~id~~~~~v-~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~ 255 (441)
..++.++.++|++++.+++.+ .+...+ + .++.+|+||+|+|...+....+|.............+..+.+
T Consensus 81 ~~gv~i~~~~v~~i~~~~~~v~~v~~~~-g--------~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~ 151 (232)
T 2cul_A 81 LRPLHLFQATATGLLLEGNRVVGVRTWE-G--------PPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLE 151 (232)
T ss_dssp CTTEEEEECCEEEEEEETTEEEEEEETT-S--------CCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHH
T ss_pred CCCcEEEEeEEEEEEEeCCEEEEEEECC-C--------CEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCH
Confidence 347888878899988765554 233221 1 268999999999987655445565422212122222222333
Q ss_pred HHHH-hcccccCCCCceeEe-eCceEEEEccCCcccC-CceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHH
Q 013546 256 KLLL-NLMLSENPGDTVQLF-SKYFVITITLSFLVRL-SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVA 332 (441)
Q Consensus 256 ~i~~-~~~~a~~~G~~~vE~-a~~v~V~il~~~~~~l-G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A 332 (441)
.+.+ .+.+....+..-... ...-.+... .+...- +.+.++ +| ++|+|||+|||+ .. .+...|
T Consensus 152 ~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~-~~~~~~~~~~~~~---~t-~~p~iya~G~~a-~~---------g~~~~~ 216 (232)
T 2cul_A 152 DLSRLGFRFVEREGEVPETPSTPGYRVRYL-AFHPEEWEEKTFR---LK-RLEGLYAVGLCV-RE---------GDYARM 216 (232)
T ss_dssp HHHHTTCCEEEEEEEEC-----CCEEEEEE-EECGGGEETTTTE---ET-TSBSEEECGGGT-SC---------CCHHHH
T ss_pred HHHhCCCeEEccccccCcCCCCCCccCchh-hcccCCCCCcccc---cc-ccccceeeeecc-cC---------ccHHHH
Confidence 3221 111110000000000 000000000 000000 122222 24 899999999999 42 278889
Q ss_pred HHHHHHHHHHHHHHh
Q 013546 333 ERQGKYLAELFNKKI 347 (441)
Q Consensus 333 ~~qg~~aA~nI~~~l 347 (441)
++||+.+|.+|.+.|
T Consensus 217 ~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 217 SEEGKRLAEHLLHEL 231 (232)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998765
No 88
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.59 E-value=1.2e-16 Score=164.61 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=68.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC--CeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI--YDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLAS 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g--~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (441)
+++|+||||||+|+++|..|++.| ++|+|||+.++++ ..+.+.........++ +......+.+..++.++.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g-g~~~~g~~p~~~~~~~----~~~~~~~~~~~~gv~~~~~~ 80 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF-GLVRFGVAPDHPEVKN----VINTFTQTARSDRCAFYGNV 80 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC-THHHHTSCTTCGGGGG----HHHHHHHHHTSTTEEEEBSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC-ceeecccCCCCccHHH----HHHHHHHHHHhCCcEEEeee
Confidence 579999999999999999999888 9999999998763 3222221111111111 11111112344677776553
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCc-CCCCCCCcc
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEP-LTFGIKGVK 238 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p-~~~~ipG~~ 238 (441)
.+ .+.|.+.+ ..+.||+||||||+.| +.|++||.+
T Consensus 81 ~v-----~~~V~~~~------------~~~~~d~lVlAtGs~~~~~~~ipG~~ 116 (460)
T 1cjc_A 81 EV-----GRDVTVQE------------LQDAYHAVVLSYGAEDHQALDIPGEE 116 (460)
T ss_dssp CB-----TTTBCHHH------------HHHHSSEEEECCCCCEECCCCCTTTT
T ss_pred EE-----eeEEEecc------------ceEEcCEEEEecCcCCCCCCCCCCCC
Confidence 22 12222221 2468999999999995 778899864
No 89
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.58 E-value=2.7e-15 Score=154.50 Aligned_cols=108 Identities=14% Similarity=0.149 Sum_probs=70.1
Q ss_pred CCcEEEECCCHHHHHHHHhhcc-C------CCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT-K------IYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSY 181 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~-~------g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~ 181 (441)
+++|+||||||||+++|..|.+ . |++|+|||+.++++ ..+.+++..+....+++...+.. ..+..++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g-g~~~~gv~p~~~~~~~~~~~~~~----~~~~~~v~ 77 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW-GLVRSGVAPDHPKIKSISKQFEK----TAEDPRFR 77 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS-THHHHTSCTTCTGGGGGHHHHHH----HHTSTTEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC-CccccccCCCCCCHHHHHHHHHH----HHhcCCCE
Confidence 5699999999999999999998 7 99999999998753 33333222111122222222222 23446788
Q ss_pred EEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCC-cCCCCCCCcc
Q 013546 182 FYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAE-PLTFGIKGVK 238 (441)
Q Consensus 182 ~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~-p~~~~ipG~~ 238 (441)
|+.+. .+ .+.|.+.+ .++.||+||||||+. |+.+++||.+
T Consensus 78 ~~~~v--~v---~~~v~~~~------------~~~~~d~lViAtG~~~~~~~~ipG~~ 118 (456)
T 1lqt_A 78 FFGNV--VV---GEHVQPGE------------LSERYDAVIYAVGAQSDRMLNIPGED 118 (456)
T ss_dssp EEESC--CB---TTTBCHHH------------HHHHSSEEEECCCCCEECCCCCTTTT
T ss_pred EEeeE--EE---CCEEEECC------------CeEeCCEEEEeeCCCCCCCCCCCCCC
Confidence 87652 12 12233222 257899999999997 6777888864
No 90
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.55 E-value=5e-15 Score=151.89 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCCCc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRNHM 144 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~~~ 144 (441)
+.++|+|||||++|+++|..|++.|+ +|+|||+.+.+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCC
Confidence 35799999999999999999999999 99999998654
No 91
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.50 E-value=4.5e-14 Score=145.17 Aligned_cols=53 Identities=13% Similarity=0.100 Sum_probs=39.3
Q ss_pred CceeeCCCcccCC----CCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHh
Q 013546 291 SQIGVDEWLRAPS----VEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNKKI 347 (441)
Q Consensus 291 G~I~Vd~~lqt~~----~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~l 347 (441)
|+|.||+++|+.. .|+|||+|||.... |- ..|.+...|.+++++++..+.+..
T Consensus 392 g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~---g~-~~~~l~~~a~r~~~i~~~~~~~~~ 448 (463)
T 3s5w_A 392 GDHEIGRDYRLQTDERCKVAIYAQGFSQASH---GL-SDTLLSVLPVRAEEISGSLYQHLK 448 (463)
T ss_dssp C--CCCTTSBCCBCTTBCSEEEESSCCHHHH---CT-TTTSSTTHHHHHHHHHHHHHHHHC
T ss_pred CCcccCcccccccCCCCCCeEEEcCCCcccC---Cc-CccchhHHHHHHHHHHHHHHhhcC
Confidence 7899999999844 45699999998643 22 356788999999999887776544
No 92
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.3e-16 Score=156.96 Aligned_cols=93 Identities=10% Similarity=-0.039 Sum_probs=62.2
Q ss_pred CCccccccccCCCcccCCCcccccccccCcCCCCcCCCcccCccchhhhhcccccccccCCCCCCCCCCCCCCcEEEECC
Q 013546 38 FSPSLENVSRNSSLSYLPSSIRMTTHMSSWSRGIKTTPHYQYHNAERIVEESESEYQELSYPGLEATKPGEKPRVVVLGT 117 (441)
Q Consensus 38 ~~~a~~~~~~~~~~~~~~grvcp~~ce~~c~~~~~~~~~~~~~~~e~~i~~~~~~~~~~~~~~~~~~~~~~~k~VvIIGg 117 (441)
..++.+...++|++...|.++|++.|..++... |+.....+|.+++.-++. +.. ....+|+||||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~---------~~~~DV~IIGa 73 (326)
T 3fpz_A 9 STSASQLHLNSTPVTHCLSDIVKKEDWSDFKFA-----PIRESTVSRAMTSRYFKD-LDK---------FAVSDVIIVGA 73 (326)
T ss_dssp -------CGGGSCCCCTTTTTCCSTTCTTCCCC-----CCCHHHHHHHHHHHHHHH-HHH---------TTEESEEEECC
T ss_pred chhhhHHHhhcCCchhhhhhhcccccccccccC-----CccHHHHHHHHHHHHHhh-hhh---------ccCCCEEEECC
Confidence 677888888899999999999998776555432 222334556655532221 111 11458999999
Q ss_pred CHHHHHHHHhhc--cCCCeEEEEcCCCCcc
Q 013546 118 GWGACRFLKGID--TKIYDAVCISPRNHMV 145 (441)
Q Consensus 118 G~aGl~aA~~L~--~~g~~Vtvie~~~~~~ 145 (441)
|||||+||.+|+ +.|++|+|||+.++++
T Consensus 74 GPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 74 GSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp SHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 999999999996 4699999999998776
No 93
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.15 E-value=1.1e-10 Score=112.35 Aligned_cols=203 Identities=16% Similarity=0.085 Sum_probs=109.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccC-CCeEEEEcCCCCcccccchh-----h---------h--hcCCCCcc--------cc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK-IYDAVCISPRNHMVFTPLLA-----S---------T--CVGTLEFR--------SV 163 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~-g~~Vtvie~~~~~~~~~ll~-----~---------~--~~g~~~~~--------~~ 163 (441)
..+|+|||||++|+++|..|++. |.+|+|||+.+......... . . ..|..... ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 35899999999999999999997 99999999987653110000 0 0 00111000 00
Q ss_pred ccchhhhhhhhcCCCCEEEEEE-EEEEEeCCCCEE---EEEec----CC-CCCCCCCCcceeeCCEEEEcCCCCcCCCCC
Q 013546 164 AEPVSRIQTSLSSDPNSYFYLA-SCIGIDTDKHEV---YCETV----NN-GKLSHEPHQFKVAYDKLVIAAGAEPLTFGI 234 (441)
Q Consensus 164 ~~~~~~~~~~~~~~~~v~~~~~-~v~~id~~~~~v---~~~~~----~~-~~~~~~~~~~~i~yD~LvlAtGs~p~~~~i 234 (441)
......+.+.+.+..++.++.+ +|++++.+.+.+ .+... .. ++ ..++..++.+|.||+|+|..+.....
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g--~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQ--SCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTS--SCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCcc--ccCceEEEECCEEEECCCCchHHHHH
Confidence 0001112222334467887765 788887665543 33210 00 00 00123478999999999987754322
Q ss_pred CCcccccccccCHhHHHHHHHHHHHhcccccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccc
Q 013546 235 KGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCA 314 (441)
Q Consensus 235 pG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a 314 (441)
.+. +...+ .+.. ......++.+. .. ..+.+|.. ++ ..|++|++||++
T Consensus 197 ~~~---------------~~~~~--g~~~-~v~~~~g~~~~------------~~-~~~~v~~~-~~-~~p~i~a~G~~~ 243 (284)
T 1rp0_A 197 GVK---------------RLKSI--GMID-HVPGMKALDMN------------TA-EDAIVRLT-RE-VVPGMIVTGMEV 243 (284)
T ss_dssp HHH---------------HHHHT--TSSS-CCCCCEEECHH------------HH-HHHHHHHC-EE-EETTEEECTHHH
T ss_pred HHH---------------Hhhhc--cCCC-CcCCcCCchhh------------hh-hHHHhhcc-cc-ccCCEEEEeeeh
Confidence 111 00000 0000 00001111000 00 01223333 45 579999999997
Q ss_pred cccccCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Q 013546 315 GFLEQTGKPVLPALAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 315 ~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~l~ 348 (441)
...+ |.+..-++...|+.+|+.+|.+|...|.
T Consensus 244 ~~~~--g~~~~gp~~~~~~~sG~~~a~~i~~~l~ 275 (284)
T 1rp0_A 244 AEID--GAPRMGPTFGAMMISGQKAGQLALKALG 275 (284)
T ss_dssp HHHH--TCEECCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred hhhc--CCCCcChHHHHHHHhHHHHHHHHHHHhh
Confidence 5432 3222334667888999999999999885
No 94
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.09 E-value=3.3e-11 Score=121.83 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=40.8
Q ss_pred Ccee---eC-CCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 291 SQIG---VD-EWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 291 G~I~---Vd-~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
|.|. +| ++|+++.+|++|++|++..+....|+ =.-++|...|..|++++.
T Consensus 346 GGv~~~~~~~~tmes~~~~gly~~GE~ldv~g~~GG----ynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 346 GGVDTKVISSKTMESNQVSGLYFIGEVLDVTGWLGG----YNFQWAWSSAYACALSIS 399 (401)
T ss_dssp EEECGGGBCTTTCBBSSSTTEEECGGGBSCEECTTT----HHHHHHHHHHHHHHHHHH
T ss_pred CccccccCChhhccccCCCCEEEEEEeEEeccCCCC----HHHHHHHHHHHHHHHHHh
Confidence 5564 56 67898789999999999988666665 478899999999999875
No 95
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.07 E-value=2.9e-11 Score=124.57 Aligned_cols=153 Identities=14% Similarity=0.115 Sum_probs=91.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCccc----ccchhhh----------------hcCCCCccccccchh
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVF----TPLLAST----------------CVGTLEFRSVAEPVS 168 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~----~~ll~~~----------------~~g~~~~~~~~~~~~ 168 (441)
.++|+|||||+||+++|..|++.|++|+|||+++ ++- .++.|.. ..|.. ........
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~--~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK--AKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE--CCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC--CCCCcCHH
Confidence 4689999999999999999999999999999987 210 0111110 00111 00001111
Q ss_pred hh--------------hhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC-
Q 013546 169 RI--------------QTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG- 233 (441)
Q Consensus 169 ~~--------------~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~- 233 (441)
.+ ...+.+..+++++.+++..++. +.+.+. + .+++||+||||||++|+.|+
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~-g-----------~~~~~d~lViATGs~p~~p~g 148 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGP--KEVEVG-G-----------ERYGAKSLILATGSEPLELKG 148 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEET-T-----------EEEEEEEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccC--CEEEEc-c-----------EEEEeCEEEEcCCCCCCCCCC
Confidence 11 0111223578888887766664 566553 1 27899999999999998885
Q ss_pred CCCcccccccccCHhHHHHHHHHHHHhcccccCCCCceeEeeC-----ceEEEEc
Q 013546 234 IKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGDTVQLFSK-----YFVITIT 283 (441)
Q Consensus 234 ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~G~~~vE~a~-----~v~V~il 283 (441)
+||. +++ .+.+++.++.+.+...+.+.+ +|..|+|+|. +.+|+++
T Consensus 149 i~~~-~~v---~~~~~~~~l~~~~~~~vvViG-gG~~g~e~A~~l~~~g~~Vtlv 198 (464)
T 2eq6_A 149 FPFG-EDV---WDSTRALKVEEGLPKRLLVIG-GGAVGLELGQVYRRLGAEVTLI 198 (464)
T ss_dssp BCCS-SSE---ECHHHHTCGGGCCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCC-CcE---EcHHHHHhhhhhcCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEE
Confidence 7772 222 255555444321112333444 6888888872 3566643
No 96
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.07 E-value=3.2e-10 Score=119.81 Aligned_cols=102 Identities=9% Similarity=-0.016 Sum_probs=72.2
Q ss_pred CCCCCCccccc--cccCCCcccC-CCcccccccccCcCCCCcCCCcccCccchhhhhcccccccccCCCCCCCCC-----
Q 013546 34 TNKCFSPSLEN--VSRNSSLSYL-PSSIRMTTHMSSWSRGIKTTPHYQYHNAERIVEESESEYQELSYPGLEATK----- 105 (441)
Q Consensus 34 ~~~~~~~a~~~--~~~~~~~~~~-~grvcp~~ce~~c~~~~~~~~~~~~~~~e~~i~~~~~~~~~~~~~~~~~~~----- 105 (441)
.++ |+++++. ++++||||.+ |||+ +| ..|-++...+ +..+...++++.+.+++ ..|..+..+.
T Consensus 43 H~~-~~~~~~~~~~~~~np~~~~~~g~v---~C-~~Ch~~~~~~-~~~c~~ch~~~~d~p~~---~~w~~~~~~~~~~~~ 113 (572)
T 1d4d_A 43 HGD-LKELAAAAPKDKVSPHKSHLIGEI---AC-TSCHKGHEKS-VAYCDACHSFGFDMPFG---GKWERKFVPVDADKA 113 (572)
T ss_dssp HCC-HHHHHHHCC---CBTTBSSCCSCC---CG-GGTSCSSSCC-CCGGGGTCCCCCCCTTC---CCCCCCCCCTTSSHH
T ss_pred CCC-HHHhhhhccccccCCchhhcCCCC---Cc-ccccccccCC-CCcccccccccccCCCc---cccccCCccccccHH
Confidence 355 6777776 7899999999 6998 79 9999997544 45555566665554433 2333332221
Q ss_pred ---------CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 106 ---------PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 106 ---------~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.....+|+|||+|++|+++|..|++.|++|+|+|+.+..
T Consensus 114 ~~~~~~~~~~~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 114 AQDKAIAAGVKETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP 161 (572)
T ss_dssp HHHHHHHSCCCEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS
T ss_pred HHHHHhhccCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 123468999999999999999999999999999998754
No 97
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.04 E-value=2.6e-11 Score=126.06 Aligned_cols=166 Identities=12% Similarity=0.099 Sum_probs=83.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc---cccchhhh----------------hcCCC-----Cccccc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV---FTPLLAST----------------CVGTL-----EFRSVA 164 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~---~~~ll~~~----------------~~g~~-----~~~~~~ 164 (441)
..+|+|||||+||+++|..|++.|++|+|||+++..+ +..+.|.. ..|.. +...+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 81 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLLV 81 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHHH
Confidence 3589999999999999999999999999999985211 00111110 00111 000000
Q ss_pred cc----hhhh---hhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCC--CCCCCCCcceeeCCEEEEcCCCCcCCCCCC
Q 013546 165 EP----VSRI---QTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNG--KLSHEPHQFKVAYDKLVIAAGAEPLTFGIK 235 (441)
Q Consensus 165 ~~----~~~~---~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~--~~~~~~~~~~i~yD~LvlAtGs~p~~~~ip 235 (441)
.. +..+ ...+.+..+++++.+++..++. +.+.+.+.... .....++..++.||+||||||+.|+.|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~ 159 (500)
T 1onf_A 82 ERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVK 159 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC----------------------------CBSSEEECCCCCBCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCCC
Confidence 00 0110 0011123578888877665543 45555320000 000000013689999999999999999999
Q ss_pred CcccccccccCHhHHHHHHHHHHHhcccccCCCCceeEeeC-----ceEEEEc
Q 013546 236 GVKENAYFLREVNHAQEIRKKLLLNLMLSENPGDTVQLFSK-----YFVITIT 283 (441)
Q Consensus 236 G~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~G~~~vE~a~-----~v~V~il 283 (441)
|.+ +++ +.+++..+.. ...+.+.+ +|..++|+|. +.+|+++
T Consensus 160 G~~-~~~---~~~~~~~~~~--~~~vvViG-gG~ig~E~A~~l~~~g~~Vtlv 205 (500)
T 1onf_A 160 GIE-NTI---SSDEFFNIKE--SKKIGIVG-SGYIAVELINVIKRLGIDSYIF 205 (500)
T ss_dssp TGG-GCE---EHHHHTTCCC--CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEE
T ss_pred CCC-ccc---CHHHHhccCC--CCeEEEEC-ChHHHHHHHHHHHHcCCeEEEE
Confidence 973 332 2333322221 12333344 6888888873 3566633
No 98
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.01 E-value=3.2e-09 Score=111.17 Aligned_cols=47 Identities=19% Similarity=0.216 Sum_probs=40.3
Q ss_pred eeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Q 013546 293 IGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 293 I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~l~ 348 (441)
|.+|++|||.+.+++|++||++- +..-...|..+|-.+|+.|.+.+.
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG---------~a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAG---------YAGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHT---------SCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCC---------hhhHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999988999999999993 344567788999999999998885
No 99
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.00 E-value=1.7e-09 Score=111.60 Aligned_cols=31 Identities=16% Similarity=0.165 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISPR 141 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~ 141 (441)
+|+|||||+||+++|..|++.|.+|+|+|+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4899999999999999999999999999997
No 100
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.97 E-value=8.8e-11 Score=120.72 Aligned_cols=145 Identities=12% Similarity=0.071 Sum_probs=84.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc----cchhhh---------------h----cCCCCcccccc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT----PLLAST---------------C----VGTLEFRSVAE 165 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~----~ll~~~---------------~----~g~~~~~~~~~ 165 (441)
.++|+||||||||+++|..|++.|++|+|||+. .++-. ++.|.. . .|... .....
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~-~~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISV-ASPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCC-CCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCccc-CCCcc
Confidence 468999999999999999999999999999994 43210 111110 0 12211 00111
Q ss_pred chhhhh--------------hhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 166 PVSRIQ--------------TSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 166 ~~~~~~--------------~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
....+. ..+.+..+++++.+++..++ .+.+.+.+ .++.||+||||||++|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~--~~~v~v~~------------~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLD--GKQVEVDG------------QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEE--TTEEEETT------------EEEECSEEEECCCEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEcc--CCEEEEee------------EEEEeCEEEEeCCCCCCC
Confidence 111110 01222357888887766665 35665532 278999999999999987
Q ss_pred CC-CCCcccccccccCHhHHHHHHHHHHHhcccccCCCCceeEee
Q 013546 232 FG-IKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGDTVQLFS 275 (441)
Q Consensus 232 ~~-ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~G~~~vE~a 275 (441)
|+ +|. +. .+.+..++.++... ...+.+.+ +|..|+|+|
T Consensus 149 ~~~~~~-~~---~v~~~~~~~~~~~~-~~~vvViG-gG~~g~e~A 187 (458)
T 1lvl_A 149 LPMLPL-GG---PVISSTEALAPKAL-PQHLVVVG-GGYIGLELG 187 (458)
T ss_dssp BTTBCC-BT---TEECHHHHTCCSSC-CSEEEEEC-CSHHHHHHH
T ss_pred CCCCCc-cC---cEecHHHHhhhhcc-CCeEEEEC-cCHHHHHHH
Confidence 75 553 22 23344444332211 11233334 678888887
No 101
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.96 E-value=3e-10 Score=119.40 Aligned_cols=120 Identities=13% Similarity=0.078 Sum_probs=71.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccch---hhhhcCC----C-------------------Cccc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLL---ASTCVGT----L-------------------EFRS 162 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll---~~~~~g~----~-------------------~~~~ 162 (441)
..+|+|||||++|+.+|..|++.|++|+|||+++.++..... ++..... . ...+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 468999999999999999999999999999998765411000 0000000 0 0001
Q ss_pred cccchhhhhhhhcCCCCEEEEEEEEEEEeCCCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCC--CCcCCCCCCCcc
Q 013546 163 VAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAG--AEPLTFGIKGVK 238 (441)
Q Consensus 163 ~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtG--s~p~~~~ipG~~ 238 (441)
+...++...+.+.-...+. ...+|++++.+.+ .+.+...++ .++.||+||+|+| +.|+.|++||.+
T Consensus 101 i~~yl~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~w~V~~~~G---------~~i~ad~lV~AtG~~s~p~~p~ipG~~ 170 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIR-FDTRVTSAVLDEEGLRWTVRTDRG---------DEVSARFLVVAAGPLSNANTPAFDGLD 170 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEE-CSCCEEEEEEETTTTEEEEEETTC---------CEEEEEEEEECCCSEEECCCCCCTTGG
T ss_pred HHHHHHHHHHHcCCCccEE-ECCEEEEEEEcCCCCEEEEEECCC---------CEEEeCEEEECcCCCCCCCCCCCCCcc
Confidence 1111112111110001222 2447888876554 444444221 3689999999999 789999999975
No 102
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.95 E-value=9.5e-11 Score=120.97 Aligned_cols=161 Identities=14% Similarity=0.130 Sum_probs=89.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCccccc----chhh------------h-----hcCCCCccccccch
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTP----LLAS------------T-----CVGTLEFRSVAEPV 167 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~----ll~~------------~-----~~g~~~~~~~~~~~ 167 (441)
.++|+|||||++|+++|..|++.|++|+|||+++.++... +.|. . ..|...........
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4589999999999999999999999999999976553110 0000 0 00110000000011
Q ss_pred hh---------------hhhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcce------eeCCEEEEcCC
Q 013546 168 SR---------------IQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFK------VAYDKLVIAAG 226 (441)
Q Consensus 168 ~~---------------~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~------i~yD~LvlAtG 226 (441)
.. +...+ +..++.++.+....+ +.+.+.+...+ ++..+ +.||+||+|||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~~~--~~~~v~V~~~~-------G~~~~~~~~~~i~~d~lViAtG 154 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLF-KKNKVTYYKGNGSFE--DETKIRVTPVD-------GLEGTVKEDHILDVKNIIVATG 154 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHTTCEEEESEEEES--SSSEEEEECCT-------TCTTCCSSCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEEEc--cCCeEEEEecC-------CCcccccccceEEeCEEEECcC
Confidence 11 01112 235788887765543 44566655321 11124 89999999999
Q ss_pred CCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCCCCceeEeeC-----ceEEEEc
Q 013546 227 AEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGDTVQLFSK-----YFVITIT 283 (441)
Q Consensus 227 s~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~G~~~vE~a~-----~v~V~il 283 (441)
+.|+ .+||.+.....+.+..++..+.. ....+.+.+ +|..|+|+|. +.+|+++
T Consensus 155 s~p~--~~~g~~~~~~~v~~~~~~~~~~~-~~~~vvViG-gG~~g~e~A~~l~~~g~~Vtlv 212 (478)
T 1v59_A 155 SEVT--PFPGIEIDEEKIVSSTGALSLKE-IPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVV 212 (478)
T ss_dssp EEEC--CCTTCCCCSSSEECHHHHTTCSS-CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCC--CCCCCCCCCceEEcHHHHHhhhc-cCceEEEEC-CCHHHHHHHHHHHHcCCEEEEE
Confidence 9884 35665311123445555544322 112233344 6888888872 3566643
No 103
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.94 E-value=4.7e-10 Score=117.81 Aligned_cols=120 Identities=14% Similarity=0.028 Sum_probs=69.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccc---hh-----------hhh--c----------CCCCccc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPL---LA-----------STC--V----------GTLEFRS 162 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~l---l~-----------~~~--~----------g~~~~~~ 162 (441)
..+|+|||||++|+.+|..|++.|++|+|||+++.++.+.. .| ... . ......+
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~e 88 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPE 88 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHH
Confidence 46899999999999999999999999999999876531100 00 000 0 0000111
Q ss_pred cccchhhhhhhhcCCCCEEEEEEEEEEEeCCCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCC--CCcCCCCCCCcc
Q 013546 163 VAEPVSRIQTSLSSDPNSYFYLASCIGIDTDKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAG--AEPLTFGIKGVK 238 (441)
Q Consensus 163 ~~~~~~~~~~~~~~~~~v~~~~~~v~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtG--s~p~~~~ipG~~ 238 (441)
+...++...+.+.-...+. ...+|++++.+.+ .+.+...+ ..++.||+||+|+| +.|+.|++||.+
T Consensus 89 i~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~---------G~~~~ad~lV~AtG~~s~p~~p~ipG~~ 158 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYR-FNTRVTAARYVENDRLWEVTLDN---------EEVVTCRFLISATGPLSASRMPDIKGID 158 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEE-CSCCEEEEEEEGGGTEEEEEETT---------TEEEEEEEEEECCCSCBC---CCCTTGG
T ss_pred HHHHHHHHHHHcCCcCcEE-ECCEEEEEEEeCCCCEEEEEECC---------CCEEEeCEEEECcCCCCCCcCCCCCCcc
Confidence 1112222211111111222 2446777765443 44444321 13789999999999 889999999975
No 104
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.93 E-value=6.5e-09 Score=110.12 Aligned_cols=121 Identities=15% Similarity=0.151 Sum_probs=72.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC-Ccccccch------------hhh--hcCCC---------Ccc---
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN-HMVFTPLL------------AST--CVGTL---------EFR--- 161 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~-~~~~~~ll------------~~~--~~g~~---------~~~--- 161 (441)
..+|+|||||+||++||..|++.|.+|+|||++. .+...++. ..+ ..+.. .+.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 4589999999999999999999999999999974 22211110 000 00100 000
Q ss_pred -----ccc--------cchhh-hhhhhcCCCCEEEEEEEEEEEeCCCCEE-EEEecCCCCCCCCCCcceeeCCEEEEcCC
Q 013546 162 -----SVA--------EPVSR-IQTSLSSDPNSYFYLASCIGIDTDKHEV-YCETVNNGKLSHEPHQFKVAYDKLVIAAG 226 (441)
Q Consensus 162 -----~~~--------~~~~~-~~~~~~~~~~v~~~~~~v~~id~~~~~v-~~~~~~~~~~~~~~~~~~i~yD~LvlAtG 226 (441)
.+. ..+.. +.+.+.+..++.++.+.|+.+..+++.+ .+...+ + ..+.+|+||+|||
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~d-G--------~~I~Ad~VVLATG 178 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQM-G--------LKFRAKAVVLTVG 178 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETT-S--------EEEEEEEEEECCS
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECC-C--------CEEECCEEEEcCC
Confidence 000 00111 1122333368888888999997655543 233211 1 3689999999999
Q ss_pred CCcCCCCCCCcc
Q 013546 227 AEPLTFGIKGVK 238 (441)
Q Consensus 227 s~p~~~~ipG~~ 238 (441)
+.++.+.++|..
T Consensus 179 t~s~~~~i~G~~ 190 (651)
T 3ces_A 179 TFLDGKIHIGLD 190 (651)
T ss_dssp TTTCCEEECC--
T ss_pred CCccCccccCcc
Confidence 987766666653
No 105
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.89 E-value=1.4e-09 Score=107.99 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+||||||||+++|..|++.|++|+|||+.+.+
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 458999999999999999999999999999998755
No 106
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.88 E-value=1.9e-09 Score=112.98 Aligned_cols=121 Identities=11% Similarity=0.012 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHhhc-cCCCeEEEEcCCCCcccccch---hhh----hcCCCCc------------ccc---cc
Q 013546 109 KPRVVVLGTGWGACRFLKGID-TKIYDAVCISPRNHMVFTPLL---AST----CVGTLEF------------RSV---AE 165 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~-~~g~~Vtvie~~~~~~~~~ll---~~~----~~g~~~~------------~~~---~~ 165 (441)
..+|+|||||++|+++|..|+ +.|++|+|||+++.++..... ++. ......+ ... ..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 458999999999999999999 999999999998765411100 000 0000000 000 00
Q ss_pred chhhhhhhhcCCCCE---EEEEEEEEEEeCCCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCC--CCcCCCCCCCcc
Q 013546 166 PVSRIQTSLSSDPNS---YFYLASCIGIDTDKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAG--AEPLTFGIKGVK 238 (441)
Q Consensus 166 ~~~~~~~~~~~~~~v---~~~~~~v~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtG--s~p~~~~ipG~~ 238 (441)
.+........+..++ .....+|++++.+.+ .+.+...++ .++.||+||+|+| +.|+.|++||.+
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G---------~~i~ad~lV~AtG~~s~p~~p~ipG~~ 158 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG---------EVYRAKYVVNAVGLLSAINFPNLPGLD 158 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS---------CEEEEEEEEECCCSCCSBCCCCCTTGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC---------CEEEeCEEEECCcccccCCCCCCCCcc
Confidence 111111111111222 223457888876554 555544221 2689999999999 689999999975
No 107
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.86 E-value=1.6e-10 Score=121.09 Aligned_cols=166 Identities=13% Similarity=0.049 Sum_probs=95.2
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC--------cccccchhhhh----------------------cCCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH--------MVFTPLLASTC----------------------VGTLE 159 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~--------~~~~~ll~~~~----------------------~g~~~ 159 (441)
.+|+||||||||+.+|.++++.|.+|+|||+... ++ +.|++..| .|..
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lG-GtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~- 120 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIG-GTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWK- 120 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSS-HHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEE-
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCC-CcccccchHHHHHHHHHHHHHHHHHhhhHhcCcc-
Confidence 4799999999999999999999999999997542 22 11211110 1110
Q ss_pred ccccccchhhh-------h-------hhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcC
Q 013546 160 FRSVAEPVSRI-------Q-------TSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAA 225 (441)
Q Consensus 160 ~~~~~~~~~~~-------~-------~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAt 225 (441)
.......+..+ . ....+..++.++.+...-++. +++.+...... ++.+.+.+|++||||
T Consensus 121 ~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~--~~v~V~~~~~~-----~~~~~i~a~~iiIAT 193 (542)
T 4b1b_A 121 FDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDK--NTVSYYLKGDL-----SKEETVTGKYILIAT 193 (542)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEET--TEEEEEEC--C-----CCEEEEEEEEEEECC
T ss_pred cCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCC--CcceEeecccC-----CceEEEeeeeEEecc
Confidence 01111111111 0 011223578888888777765 44544332110 123578999999999
Q ss_pred CCCcCCCCCCCc-ccccccccCHhHHHHHHHHHHHhcccccCCCCceeEeeC-----ceEEE------EccCCccc
Q 013546 226 GAEPLTFGIKGV-KENAYFLREVNHAQEIRKKLLLNLMLSENPGDTVQLFSK-----YFVIT------ITLSFLVR 289 (441)
Q Consensus 226 Gs~p~~~~ipG~-~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~G~~~vE~a~-----~v~V~------il~~~~~~ 289 (441)
|++|..|+.++. .+.++ +.+++..+.+. .+.+.+.+ +|+.|+|+|. +.+|+ +|+.+|++
T Consensus 194 Gs~P~~P~~~~~~~~~~~---ts~~~l~l~~l-P~~lvIIG-gG~IGlE~A~~~~~lG~~VTii~~~~~L~~~D~e 264 (542)
T 4b1b_A 194 GCRPHIPDDVEGAKELSI---TSDDIFSLKKD-PGKTLVVG-ASYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQ 264 (542)
T ss_dssp CEEECCCSSSBTHHHHCB---CHHHHTTCSSC-CCSEEEEC-CSHHHHHHHHHHHHHTCCEEEEESSCSSTTSCHH
T ss_pred CCCCCCCCcccCCCcccc---CchhhhccccC-CceEEEEC-CCHHHHHHHHHHHhcCCeEEEecccccccccchh
Confidence 999998854443 33332 33343333221 12344455 7999999983 34555 45555554
No 108
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.77 E-value=1.7e-09 Score=111.47 Aligned_cols=34 Identities=21% Similarity=0.121 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+|+|||||++|+++|..|++.|++|+|||+++
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 4689999999999999999999999999999986
No 109
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.77 E-value=1.9e-09 Score=110.78 Aligned_cols=117 Identities=13% Similarity=0.063 Sum_probs=72.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc----cchhhhh----------------cCCC------Cccc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT----PLLASTC----------------VGTL------EFRS 162 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~----~ll~~~~----------------~g~~------~~~~ 162 (441)
..+|+|||||++|+++|..|++.|++|+|||+. .++-. ++.|... .|.. +...
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF-RYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 358999999999999999999999999999994 33210 0111000 0100 0000
Q ss_pred ccc-------chhhhhhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcC-CCCC
Q 013546 163 VAE-------PVSRIQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPL-TFGI 234 (441)
Q Consensus 163 ~~~-------~~~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~-~~~i 234 (441)
+.. .+......+.+..++.++.+.+..++ .+.+.+... ..++.||+||+|||+.|. .|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~~v~~~~~----------~~~~~~d~lviAtG~~p~~~p~i 151 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAG--PNTVKLLAS----------GKTVTAERIVIAVGGHPSPHDAL 151 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SSEEEETTT----------TEEEEEEEEEECCCEEECCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee--CCEEEEecC----------CeEEEeCEEEEecCCCcccCCCC
Confidence 000 00001111122246788888777665 356655211 137899999999999999 9999
Q ss_pred CCcc
Q 013546 235 KGVK 238 (441)
Q Consensus 235 pG~~ 238 (441)
||.+
T Consensus 152 ~G~~ 155 (463)
T 4dna_A 152 PGHE 155 (463)
T ss_dssp TTGG
T ss_pred CCcc
Confidence 9974
No 110
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.76 E-value=1.7e-09 Score=110.87 Aligned_cols=148 Identities=14% Similarity=0.080 Sum_probs=84.8
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccc----cchhhh---------------hcCCCCccccccchhhh
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFT----PLLAST---------------CVGTLEFRSVAEPVSRI 170 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~----~ll~~~---------------~~g~~~~~~~~~~~~~~ 170 (441)
.+|+||||||||+++|..|++.|++|+|||+++.++.. .+.|.. ..|.. ..........+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~ 80 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAK-VKGVELDLPAL 80 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEE-ECCEEECHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcc-cCCCccCHHHH
Confidence 47999999999999999999999999999998765311 111110 00110 00000111110
Q ss_pred --------------hhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCC
Q 013546 171 --------------QTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKG 236 (441)
Q Consensus 171 --------------~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG 236 (441)
...+.+..+++++.+++..++ .+.+.+.. + + .++.||+||||||++|+.|++||
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~--~~~~~v~~-~-g--------~~~~~d~lviAtG~~p~~~~~~g 148 (455)
T 2yqu_A 81 MAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLS--ERKVLVEE-T-G--------EELEARYILIATGSAPLIPPWAQ 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SSEEEETT-T-C--------CEEEEEEEEECCCEEECCCTTBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEec--CCeEEEee-C-C--------EEEEecEEEECCCCCCCCCCCCC
Confidence 001122246788887766544 45565542 1 1 37899999999999999998888
Q ss_pred ccc-ccccccCHhHHHHHHHHHHHhcccccCCCCceeEee
Q 013546 237 VKE-NAYFLREVNHAQEIRKKLLLNLMLSENPGDTVQLFS 275 (441)
Q Consensus 237 ~~~-~~~~l~~~~~a~~~~~~i~~~~~~a~~~G~~~vE~a 275 (441)
.+. +++ +..++..+... ...+.+.+ +|..|+|+|
T Consensus 149 ~~~~~v~---~~~~~~~~~~~-~~~vvIiG-gG~~g~e~A 183 (455)
T 2yqu_A 149 VDYERVV---TSTEALSFPEV-PKRLIVVG-GGVIGLELG 183 (455)
T ss_dssp CCSSSEE---CHHHHTCCSSC-CSEEEEEC-CSHHHHHHH
T ss_pred CCcCcEe---chHHhhccccC-CCeEEEEC-CCHHHHHHH
Confidence 643 222 33333222110 11222333 567777776
No 111
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.73 E-value=1.2e-08 Score=107.09 Aligned_cols=37 Identities=16% Similarity=0.169 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
..+|+|||||++|+++|..|++.|++|+|||+++.++
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G 52 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG 52 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 4589999999999999999999999999999987653
No 112
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.58 E-value=3.2e-08 Score=100.36 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
+..+|+|||||++|+++|..|++.|++|+|+|+.+..
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3568999999999999999999999999999998865
No 113
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.52 E-value=2.1e-07 Score=96.25 Aligned_cols=106 Identities=15% Similarity=0.095 Sum_probs=71.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++.- . .+.++...+.+. +. ..++.++.+ .+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~-~d~~~~~~l~~~---l~-~~gV~v~~~~~v 262 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG----------G-MDGEVAKQLQRM---LT-KQGIDFKLGAKV 262 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS----------S-SCHHHHHHHHHH---HH-HTTCEEECSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc----------c-CCHHHHHHHHHH---HH-hCCCEEEECCeE
Confidence 67999999999999999999999999999999886641 1 111222223332 22 346777654 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG 233 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ 233 (441)
.+++.+.+.+.+...+.. .++..++++|.||+|+|.+|+...
T Consensus 263 ~~i~~~~~~~~v~~~~~~----~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 263 TGAVKSGDGAKVTFEPVK----GGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEEEETTEEEEEEEETT----SCCCEEEEESEEEECCCCEECCTT
T ss_pred EEEEEeCCEEEEEEEecC----CCceEEEEcCEEEEeeCCccCCCc
Confidence 888766555443322100 012347899999999999988753
No 114
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.52 E-value=9.7e-08 Score=95.12 Aligned_cols=37 Identities=14% Similarity=0.197 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
+..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 3569999999999999999999999999999998755
No 115
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.51 E-value=3.2e-08 Score=102.46 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+|+||||||||+++|..|++.|++|+|||+++
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 589999999999999999999999999999975
No 116
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.51 E-value=2.3e-07 Score=92.77 Aligned_cols=100 Identities=22% Similarity=0.304 Sum_probs=70.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|++|+++|..|++.|.+||++|+.+.+.- ...+..+...+.+. +. ..++.++.+ .+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~~~~~~~~~~l~~~---l~-~~gv~i~~~~~v 210 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP----------GLLHPAAAKAVQAG---LE-GLGVRFHLGPVL 210 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST----------TTSCHHHHHHHHHH---HH-TTTCEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh----------cccCHHHHHHHHHH---HH-HcCCEEEeCCEE
Confidence 67999999999999999999999999999999886541 11111122223222 33 357777765 68
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++.+.+.+.+...++ .++++|.||+|+|.+|+.
T Consensus 211 ~~i~~~~~~~~v~~~~g---------~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 211 ASLKKAGEGLEAHLSDG---------EVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEEEEETTEEEEEETTS---------CEEEESEEEECSCEEECC
T ss_pred EEEEecCCEEEEEECCC---------CEEECCEEEECcCCCcCH
Confidence 88876555555443211 378999999999998875
No 117
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.51 E-value=6.3e-07 Score=93.82 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=34.4
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.+++|+|||+|..|+++|..|++.+.+||+|++.+..
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 213 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQY 213 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 3789999999999999999999999999999999863
No 118
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=2.1e-07 Score=95.21 Aligned_cols=161 Identities=20% Similarity=0.223 Sum_probs=112.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||++|+++|..|++.|.+|||+|+.+++. + . .+.++...+.+. +. ..++.++.+ .+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~--------~-~~~~~~~~l~~~---l~-~~gv~i~~~~~v 234 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL--S--------G-FEKQMAAIIKKR---LK-KKGVEVVTNALA 234 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--T--------T-SCHHHHHHHHHH---HH-HTTCEEEESEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--c--------c-cCHHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 5799999999999999999999999999999988654 1 1 111122222222 22 346777664 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++.+.+.+.+....+ ++..++++|.||+|+|.+|+...+. .++- .
T Consensus 235 ~~i~~~~~~~~v~~~~~------g~~~~~~~D~vv~a~G~~p~~~~l~-~~~~-------------------g------- 281 (455)
T 1ebd_A 235 KGAEEREDGVTVTYEAN------GETKTIDADYVLVTVGRRPNTDELG-LEQI-------------------G------- 281 (455)
T ss_dssp EEEEEETTEEEEEEEET------TEEEEEEESEEEECSCEEESCSSSS-TTTT-------------------T-------
T ss_pred EEEEEeCCeEEEEEEeC------CceeEEEcCEEEECcCCCcccCcCC-hhhc-------------------C-------
Confidence 88876555444432100 1124789999999999998865321 1000 0
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
+++ +.. |+|.||++||| +.|+|||+|||+. .|+++..|++||+.+|+||.
T Consensus 282 ----~~~------------~~~-G~i~vd~~~~t-~~~~Iya~GD~~~---------~~~~~~~A~~~g~~aa~~i~ 331 (455)
T 1ebd_A 282 ----IKM------------TNR-GLIEVDQQCRT-SVPNIFAIGDIVP---------GPALAHKASYEGKVAAEAIA 331 (455)
T ss_dssp ----CCB------------CTT-SCBCCCTTCBC-SSTTEEECGGGSS---------SCCCHHHHHHHHHHHHHHHT
T ss_pred ----Ccc------------CCC-CCEeeCCCccc-CCCCEEEEeccCC---------CcccHHHHHHHHHHHHHHHc
Confidence 111 011 78999999999 9999999999992 36789999999999999997
No 119
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.48 E-value=1.8e-07 Score=95.42 Aligned_cols=96 Identities=17% Similarity=0.250 Sum_probs=69.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+|||+++.+++. ...+.++...+.+. +. ..++.++.+ .+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll-----------~~~d~~~~~~~~~~---l~-~~gV~i~~~~~v 211 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN-----------KLMDADMNQPILDE---LD-KREIPYRLNEEI 211 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS-----------TTSCGGGGHHHHHH---HH-HTTCCEEESCCE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc-----------ccccchhHHHHHHH---hh-ccceEEEeccEE
Confidence 5799999999999999999999999999999998664 11122233333333 22 246666554 67
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+++. +.+.++++ +++++|.|++|+|.+|+..
T Consensus 212 ~~~~~--~~v~~~~g-----------~~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 212 NAING--NEITFKSG-----------KVEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp EEEET--TEEEETTS-----------CEEECSEEEECCCEEESCG
T ss_pred EEecC--CeeeecCC-----------eEEeeeeEEEEeceecCcH
Confidence 77764 45655442 3789999999999998764
No 120
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.47 E-value=5.6e-06 Score=87.77 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=41.1
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCc-hHHHHHHHHHHHHHHHHHHhc
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPA-LAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~-~a~~A~~qg~~aA~nI~~~l~ 348 (441)
|.|.||.+.|| ++|++||+|||+... ..|...... ....|+-.|+.|++++.+++.
T Consensus 360 GGi~vd~~~~~-~IpGLyAaGe~a~~g-~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~ 416 (602)
T 1kf6_A 360 GGIETDQNCET-RIKGLFAVGECSSVG-LHGANRLGSNSLAELVVFGRLAGEQATERAA 416 (602)
T ss_dssp CEEECCTTSBC-SSBTEEECGGGEECS-SSTTSCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEECCCCcc-ccCCEEEcccccccc-ccCCCCCccHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999 999999999997311 123222222 235677789999999987763
No 121
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46 E-value=2.6e-07 Score=94.29 Aligned_cols=102 Identities=15% Similarity=0.078 Sum_probs=70.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||++|+++|..|++.|.+|+++|+.+++.-. ....++...+.+. + +..++.++.+ .+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~---l-~~~gv~i~~~~~v 214 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------YLDKEFTDVLTEE---M-EANNITIATGETV 214 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TCCHHHHHHHHHH---H-HTTTEEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc----------cCCHHHHHHHHHH---H-HhCCCEEEcCCEE
Confidence 679999999999999999999999999999998865410 0111122222222 2 3457888775 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGI 234 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~i 234 (441)
.+++.+.+...+... + .++++|.||+|+|.+|+.+.+
T Consensus 215 ~~i~~~~~v~~v~~~--~--------~~i~~d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 215 ERYEGDGRVQKVVTD--K--------NAYDADLVVVAVGVRPNTAWL 251 (447)
T ss_dssp EEEECSSBCCEEEES--S--------CEEECSEEEECSCEEESCGGG
T ss_pred EEEEccCcEEEEEEC--C--------CEEECCEEEECcCCCCChHHH
Confidence 888865332122221 1 278999999999999876533
No 122
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.46 E-value=2.6e-07 Score=97.54 Aligned_cols=120 Identities=14% Similarity=0.123 Sum_probs=72.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC-Ccccccc-----------h-hhh--hcCC---------CCc----
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN-HMVFTPL-----------L-AST--CVGT---------LEF---- 160 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~-~~~~~~l-----------l-~~~--~~g~---------~~~---- 160 (441)
..+|+|||||+||++||..+++.|.+|+|||++. .+...++ + .++ ..|. ..+
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 3589999999999999999999999999999974 2221111 0 000 0010 000
Q ss_pred ----cccc--------cch-hhhhhhhcCCCCEEEEEEEEEEEeCCCCEEE-EEecCCCCCCCCCCcceeeCCEEEEcCC
Q 013546 161 ----RSVA--------EPV-SRIQTSLSSDPNSYFYLASCIGIDTDKHEVY-CETVNNGKLSHEPHQFKVAYDKLVIAAG 226 (441)
Q Consensus 161 ----~~~~--------~~~-~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~i~yD~LvlAtG 226 (441)
..+. ..+ ..+.+.+.+..++.++.+.|+++..+++.+. +...+ + ..+.+|+||+|||
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~d-G--------~~i~AdaVVLATG 177 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNL-G--------VEYKTKAVVVTTG 177 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETT-S--------CEEECSEEEECCT
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECC-C--------cEEEeCEEEEccC
Confidence 0000 001 1111223333688888889999876655442 33221 1 3789999999999
Q ss_pred CCcCCCCCCCc
Q 013546 227 AEPLTFGIKGV 237 (441)
Q Consensus 227 s~p~~~~ipG~ 237 (441)
..++.+.++|.
T Consensus 178 ~~s~~~~~~G~ 188 (637)
T 2zxi_A 178 TFLNGVIYIGD 188 (637)
T ss_dssp TCBTCEEEETT
T ss_pred CCccCceeccc
Confidence 88766655554
No 123
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.43 E-value=2.3e-07 Score=95.19 Aligned_cols=104 Identities=14% Similarity=0.146 Sum_probs=70.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+|||+++.+++. + . .+.++...+.+. +. ..++.++.+ .+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~--------~-~~~~~~~~l~~~---l~-~~gv~i~~~~~v 235 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL--P--------N-EDADVSKEIEKQ---FK-KLGVTILTATKV 235 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--T--------T-SCHHHHHHHHHH---HH-HHTCEEECSCEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc--c--------c-cCHHHHHHHHHH---HH-HcCCEEEeCcEE
Confidence 5799999999999999999999999999999998654 1 1 111122222222 22 246777664 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG 233 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ 233 (441)
.+++.+.+.+.+....+ ++..++++|.||+|+|.+|+...
T Consensus 236 ~~i~~~~~~~~v~~~~~------g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 236 ESIADGGSQVTVTVTKD------GVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EEEEECSSCEEEEEESS------SCEEEEEESEEEECSCEEECCSS
T ss_pred EEEEEcCCeEEEEEEcC------CceEEEEcCEEEECCCCCccCCC
Confidence 88876554344332101 12247899999999999988653
No 124
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.43 E-value=3.2e-07 Score=92.58 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=68.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++.- ...+..+...+.+. +. ..++.++.+ .+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~~~~~~~~~~l~~~---l~-~~GV~i~~~~~v 210 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS----------RAAPATLADFVARY---HA-AQGVDLRFERSV 210 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST----------TTSCHHHHHHHHHH---HH-HTTCEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc----------cccCHHHHHHHHHH---HH-HcCcEEEeCCEE
Confidence 67999999999999999999999999999999886541 00111122222222 22 347777766 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++ ++ .+.+.++ .++++|.||+|+|.+|+.
T Consensus 211 ~~i~-~~-~v~~~~g-----------~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 211 TGSV-DG-VVLLDDG-----------TRIAADMVVVGIGVLAND 241 (408)
T ss_dssp EEEE-TT-EEEETTS-----------CEEECSEEEECSCEEECC
T ss_pred EEEE-CC-EEEECCC-----------CEEEcCEEEECcCCCccH
Confidence 8888 33 5655331 378999999999998875
No 125
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.43 E-value=1.7e-07 Score=96.63 Aligned_cols=104 Identities=12% Similarity=0.117 Sum_probs=70.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+|||+++.+++. + . .+.++...+.+. + +..++.++.+ .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l--~--------~-~~~~~~~~l~~~---l-~~~gV~i~~~~~v 249 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM--Q--------G-ADRDLVKVWQKQ---N-EYRFDNIMVNTKT 249 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS--T--------T-SCHHHHHHHHHH---H-GGGEEEEECSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--c--------c-cCHHHHHHHHHH---H-HhcCCEEEECCEE
Confidence 6799999999999999999999999999999998654 1 1 111222223332 2 2357887765 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+++.+.+.+.+...+.+ ++..++++|.||+|+|.+|+..
T Consensus 250 ~~i~~~~~~~~v~~~~~~-----~~g~~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 250 VAVEPKEDGVYVTFEGAN-----APKEPQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EEEEEETTEEEEEEESSS-----CCSSCEEESCEEECCCEEECGG
T ss_pred EEEEEcCCeEEEEEeccC-----CCceEEEcCEEEECcCCCcCCC
Confidence 888765544433321100 0013678999999999998764
No 126
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.42 E-value=3e-07 Score=94.58 Aligned_cols=164 Identities=20% Similarity=0.251 Sum_probs=112.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++.-. ..+.++...+.+. +. ..++.++.+ .+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~---l~-~~Gv~i~~~~~v 243 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV----------GIDMEISKNFQRI---LQ-KQGFKFKLNTKV 243 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS----------SCCHHHHHHHHHH---HH-HTTCEEECSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc----------ccCHHHHHHHHHH---HH-HCCCEEEeCceE
Confidence 579999999999999999999999999999998865410 0111122222222 22 346777664 78
Q ss_pred EEEeCCCCE-EEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccC
Q 013546 188 IGIDTDKHE-VYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSEN 266 (441)
Q Consensus 188 ~~id~~~~~-v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~ 266 (441)
.+++.+.+. +.+..... ..++..++++|.||+|+|.+|+...+ +.+ .. .+.
T Consensus 244 ~~i~~~~~~~~~v~~~~~----~~~~~~~i~~D~vv~a~G~~p~~~~l-~l~-----------------~~--g~~---- 295 (474)
T 1zmd_A 244 TGATKKSDGKIDVSIEAA----SGGKAEVITCDVLLVCIGRRPFTKNL-GLE-----------------EL--GIE---- 295 (474)
T ss_dssp EEEEECTTSCEEEEEEET----TSCCCEEEEESEEEECSCEEECCTTS-SHH-----------------HH--TCC----
T ss_pred EEEEEcCCceEEEEEEec----CCCCceEEEcCEEEECcCCCcCCCcC-Cch-----------------hc--CCc----
Confidence 888765533 44331100 00112478999999999999876422 110 00 011
Q ss_pred CCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 267 PGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 267 ~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
+ +.. |+|.||++||| +.|+|||+|||+. .|++++.|++||+.+|.||.
T Consensus 296 -------~------------~~~-G~i~vd~~~~t-~~~~IyA~GD~~~---------~~~~~~~A~~~g~~aa~~i~ 343 (474)
T 1zmd_A 296 -------L------------DPR-GRIPVNTRFQT-KIPNIYAIGDVVA---------GPMLAHKAEDEGIICVEGMA 343 (474)
T ss_dssp -------C------------CTT-SCCCCCTTCBC-SSTTEEECGGGSS---------SCCCHHHHHHHHHHHHHHHT
T ss_pred -------c------------CCC-CCEEECcCCcc-CCCCEEEeeecCC---------CCccHHHHHHHHHHHHHHhc
Confidence 0 111 78999999999 9999999999992 36789999999999999997
No 127
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.42 E-value=3.1e-07 Score=94.28 Aligned_cols=159 Identities=17% Similarity=0.277 Sum_probs=111.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||++|+++|..|++.|.+||++++.+++.- ..+ ..+...+.+. +. ..++.++.+ .+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~----------~~~-~~~~~~l~~~---l~-~~gv~i~~~~~v 230 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF----------QFD-PLLSATLAEN---MH-AQGIETHLEFAV 230 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------TSC-HHHHHHHHHH---HH-HTTCEEESSCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc----------ccC-HHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 57999999999999999999999999999999876541 111 1122222222 22 246777655 68
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++.+.+.+.+...+ +++ ++++|.||+|+|.+|+...+. .+ .. .+.
T Consensus 231 ~~i~~~~~~~~v~~~~-------G~~-~i~~D~vv~a~G~~p~~~~l~-~~-----------------~~--g~~----- 277 (463)
T 2r9z_A 231 AALERDAQGTTLVAQD-------GTR-LEGFDSVIWAVGRAPNTRDLG-LE-----------------AA--GIE----- 277 (463)
T ss_dssp EEEEEETTEEEEEETT-------CCE-EEEESEEEECSCEEESCTTSC-HH-----------------HH--TCC-----
T ss_pred EEEEEeCCeEEEEEeC-------CcE-EEEcCEEEECCCCCcCCCCCC-ch-----------------hc--CCc-----
Confidence 8887654444444321 111 689999999999998764221 10 00 111
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
+ +.. |+|.||+++|| +.|+|||+|||+ + .++++..|++||+.+|.||.
T Consensus 278 ------~------------~~~-G~i~vd~~~~t-~~~~Iya~GD~~------~---~~~~~~~A~~~g~~aa~~i~ 325 (463)
T 2r9z_A 278 ------V------------QSN-GMVPTDAYQNT-NVPGVYALGDIT------G---RDQLTPVAIAAGRRLAERLF 325 (463)
T ss_dssp ------C------------CTT-SCCCCCTTSBC-SSTTEEECGGGG------T---SCCCHHHHHHHHHHHHHHHH
T ss_pred ------c------------CCC-CCEeECCCCcc-CCCCEEEEeecC------C---CcccHHHHHHHHHHHHHHHc
Confidence 0 111 78999999999 999999999998 2 36789999999999999997
No 128
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.41 E-value=6.6e-07 Score=91.46 Aligned_cols=102 Identities=14% Similarity=0.155 Sum_probs=72.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++++|||+|+.|+++|..|++.|.+||++++.+++.- ...+.++...+.+. + +..++.++.+ .|
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~~~d~~~~~~l~~~---l-~~~GV~i~~~~~v 212 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP----------KYFDKEMVAEVQKS---L-EKQAVIFHFEETV 212 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST----------TTCCHHHHHHHHHH---H-HTTTEEEEETCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc----------ccCCHHHHHHHHHH---H-HHcCCEEEeCCEE
Confidence 67999999999999999999999999999999886541 10111222223332 2 3457888764 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGI 234 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~i 234 (441)
.+++..++.+.+...+ .++++|.||+|+|.+|+...+
T Consensus 213 ~~i~~~~~~v~v~~~~----------g~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 213 LGIEETANGIVLETSE----------QEISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp EEEEECSSCEEEEESS----------CEEEESEEEECSCCBCCCSSC
T ss_pred EEEEccCCeEEEEECC----------CEEEeCEEEECcCCCCChHHH
Confidence 8887555555444311 178999999999999987643
No 129
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.41 E-value=2.9e-07 Score=97.53 Aligned_cols=115 Identities=14% Similarity=0.223 Sum_probs=69.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC-Ccccccc------------hhhh--hcCCC---------Ccc---
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN-HMVFTPL------------LAST--CVGTL---------EFR--- 161 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~-~~~~~~l------------l~~~--~~g~~---------~~~--- 161 (441)
..+|+|||||+||+++|..|++.|.+|+|||+.+ .+...++ +..+ ..+.. .+.
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 4689999999999999999999999999999974 2221111 0000 00100 000
Q ss_pred -----cc-----cc---ch-hhhhhhhcCCCCEEEEEEEEEEEeCCCCEEE-EEecCCCCCCCCCCcceeeCCEEEEcCC
Q 013546 162 -----SV-----AE---PV-SRIQTSLSSDPNSYFYLASCIGIDTDKHEVY-CETVNNGKLSHEPHQFKVAYDKLVIAAG 226 (441)
Q Consensus 162 -----~~-----~~---~~-~~~~~~~~~~~~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~~i~yD~LvlAtG 226 (441)
.. .. .+ ..+.+.+.+.+++.++.+.|+.+..+++.+. +...+ + ..+.+|+||+|||
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~-G--------~~i~Ad~VVLATG 171 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRS-G--------RAIQAKAAILACG 171 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETT-S--------CEEEEEEEEECCT
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECC-C--------cEEEeCEEEECcC
Confidence 00 00 01 1111223344588888888988876666654 33321 1 3789999999999
Q ss_pred CCcCCC
Q 013546 227 AEPLTF 232 (441)
Q Consensus 227 s~p~~~ 232 (441)
..++.+
T Consensus 172 ~~s~~~ 177 (641)
T 3cp8_A 172 TFLNGL 177 (641)
T ss_dssp TCBTCE
T ss_pred CCCCcc
Confidence 875533
No 130
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.41 E-value=3.3e-07 Score=94.90 Aligned_cols=156 Identities=19% Similarity=0.292 Sum_probs=113.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+||++++.+++. + ..+ .++...+.+. +. ..++.++.+ .|
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~--------~~d-~~~~~~l~~~---l~-~~GV~i~~~~~V 246 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL--P--------YED-ADAALVLEES---FA-ERGVRLFKNARA 246 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS--C--------CSS-HHHHHHHHHH---HH-HTTCEEETTCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--c--------ccC-HHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 5799999999999999999999999999999988654 1 111 1222223332 22 347777655 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC--CCCcccccccccCHhHHHHHHHHHHHhccccc
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG--IKGVKENAYFLREVNHAQEIRKKLLLNLMLSE 265 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~--ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~ 265 (441)
.+++.+.+.+.+...+ ..++++|.||+|+|.+|+... ++..
T Consensus 247 ~~i~~~~~~v~v~~~~---------g~~i~aD~Vv~a~G~~p~~~~l~l~~~---------------------------- 289 (499)
T 1xdi_A 247 ASVTRTGAGVLVTMTD---------GRTVEGSHALMTIGSVPNTSGLGLERV---------------------------- 289 (499)
T ss_dssp EEEEECSSSEEEEETT---------SCEEEESEEEECCCEEECCSSSCTTTT----------------------------
T ss_pred EEEEEeCCEEEEEECC---------CcEEEcCEEEECCCCCcCCCcCCchhc----------------------------
Confidence 8887665445555321 137899999999999988643 2211
Q ss_pred CCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 266 NPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 266 ~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
| +++ +.. |+|.||++||| +.|+|||+|||+. .++++..|++||+++|+||.
T Consensus 290 --g---l~~------------~~~-G~i~Vd~~~~t-~~~~IyA~GD~~~---------~~~l~~~A~~~g~~aa~~i~ 340 (499)
T 1xdi_A 290 --G---IQL------------GRG-NYLTVDRVSRT-LATGIYAAGDCTG---------LLPLASVAAMQGRIAMYHAL 340 (499)
T ss_dssp --T---CCC------------BTT-TBCCCCSSSBC-SSTTEEECSGGGT---------SCSCHHHHHHHHHHHHHHHT
T ss_pred --C---ceE------------CCC-CCEEECCCccc-CCCCEEEEeccCC---------CcccHHHHHHHHHHHHHHhc
Confidence 0 111 111 78999999999 9999999999992 35789999999999999997
No 131
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.41 E-value=5.6e-07 Score=92.62 Aligned_cols=164 Identities=18% Similarity=0.139 Sum_probs=112.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++. + . .+.++...+.+. +. ..++.++.+ .+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~--------~-~d~~~~~~~~~~---l~-~~gv~i~~~~~v 251 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL--R--------S-FDSMISTNCTEE---LE-NAGVEVLKFSQV 251 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--T--------T-SCHHHHHHHHHH---HH-HTTCEEETTEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc--c--------c-cCHHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 6799999999999999999999999999999988654 1 1 111222223222 22 346777654 67
Q ss_pred EEEeCCCC--EEEEEecCCCCCCCCCCc--ceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhccc
Q 013546 188 IGIDTDKH--EVYCETVNNGKLSHEPHQ--FKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLML 263 (441)
Q Consensus 188 ~~id~~~~--~v~~~~~~~~~~~~~~~~--~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~ 263 (441)
.+++...+ .+.+...+.+ .++. .++++|.||+|+|.+|+...+.-. .
T Consensus 252 ~~i~~~~~~~~~~v~~~~~~----~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~----------------------~--- 302 (478)
T 3dk9_A 252 KEVKKTLSGLEVSMVTAVPG----RLPVMTMIPDVDCLLWAIGRVPNTKDLSLN----------------------K--- 302 (478)
T ss_dssp EEEEECSSSEEEEEEECCTT----SCCEEEEEEEESEEEECSCEEESCTTSCGG----------------------G---
T ss_pred EEEEEcCCCcEEEEEEccCC----CCcccceEEEcCEEEEeeccccCCCCCCch----------------------h---
Confidence 88875433 2444332110 0111 478999999999999876532100 0
Q ss_pred ccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHH
Q 013546 264 SENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELF 343 (441)
Q Consensus 264 a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI 343 (441)
. ++++ +.. |+|.||+++|| +.|+|||+|||+ ..|.++..|+.||+.+|+||
T Consensus 303 ~------g~~~------------~~~-G~i~vd~~~~t-~~~~IyA~GD~~---------~~~~~~~~A~~~g~~aa~~i 353 (478)
T 3dk9_A 303 L------GIQT------------DDK-GHIIVDEFQNT-NVKGIYAVGDVC---------GKALLTPVAIAAGRKLAHRL 353 (478)
T ss_dssp G------TCCB------------CTT-CCBCCCTTCBC-SSTTEEECGGGG---------CSSCCHHHHHHHHHHHHHHH
T ss_pred c------CCee------------CCC-CCEeeCCCccc-CCCCEEEEEecC---------CCCccHhHHHHHHHHHHHHH
Confidence 0 0111 111 78999999999 999999999999 24789999999999999999
Q ss_pred HH
Q 013546 344 NK 345 (441)
Q Consensus 344 ~~ 345 (441)
..
T Consensus 354 ~~ 355 (478)
T 3dk9_A 354 FE 355 (478)
T ss_dssp HS
T ss_pred cC
Confidence 83
No 132
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.40 E-value=3.7e-07 Score=94.55 Aligned_cols=100 Identities=15% Similarity=0.161 Sum_probs=69.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccC---CCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK---IYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~---g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (441)
+++|+|||||+.|+++|..|++. |.+||++++.+++. + ..+ .++...+.+. +. ..++.++.+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--~--------~~d-~~~~~~l~~~---l~-~~GV~i~~~ 255 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL--R--------GFD-ETIREEVTKQ---LT-ANGIEIMTN 255 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC--T--------TSC-HHHHHHHHHH---HH-HTTCEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc--c--------ccC-HHHHHHHHHH---HH-hCCCEEEeC
Confidence 67999999999999999999998 99999999988654 1 111 1122223222 22 347777765
Q ss_pred -EEEEEeCCC-CEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 186 -SCIGIDTDK-HEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 186 -~v~~id~~~-~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.|.+++.+. +.+.+...+ + .++++|.||+|+|.+|+..
T Consensus 256 ~~v~~i~~~~~~~~~v~~~~-G--------~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 256 ENPAKVSLNTDGSKHVTFES-G--------KTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp CCEEEEEECTTSCEEEEETT-S--------CEEEESEEEECSCEEECCG
T ss_pred CEEEEEEEcCCceEEEEECC-C--------cEEEcCEEEECCCCccccc
Confidence 788887653 223333211 1 2789999999999998764
No 133
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.40 E-value=4.1e-07 Score=94.08 Aligned_cols=100 Identities=11% Similarity=0.125 Sum_probs=69.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccC---CCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK---IYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA 185 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~---g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (441)
+++|+|||||+.|+++|..|++. |.+||++++.+++. + ..+ .++...+.+. +. ..++.++.+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--~--------~~d-~~~~~~l~~~---l~-~~GV~i~~~ 251 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL--R--------GFD-SELRKQLTEQ---LR-ANGINVRTH 251 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS--T--------TSC-HHHHHHHHHH---HH-HTTEEEEET
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc--c--------ccC-HHHHHHHHHH---HH-hCCCEEEeC
Confidence 67999999999999999999998 99999999998654 1 111 1122223222 22 357888766
Q ss_pred -EEEEEeCCCC-EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 186 -SCIGIDTDKH-EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 186 -~v~~id~~~~-~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.|.+++.+.+ .+.+...+ + .++++|.||+|+|.+|+..
T Consensus 252 ~~v~~i~~~~~~~~~v~~~~-G--------~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 252 ENPAKVTKNADGTRHVVFES-G--------AEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp CCEEEEEECTTSCEEEEETT-S--------CEEEESEEEECSCEEESCT
T ss_pred CEEEEEEEcCCCEEEEEECC-C--------cEEEcCEEEEccCCCcCcc
Confidence 7888876532 23333321 1 2789999999999998874
No 134
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.39 E-value=3.2e-07 Score=93.77 Aligned_cols=158 Identities=20% Similarity=0.255 Sum_probs=110.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||++|+++|..|++.|.+|+|+|+.+++. + ..+ ..+...+.+. +. ..++.++.+ .+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~--------~~~-~~~~~~l~~~---l~-~~Gv~i~~~~~v 231 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL--P--------SFD-PMISETLVEV---MN-AEGPQLHTNAIP 231 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--T--------TSC-HHHHHHHHHH---HH-HHSCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh--h--------hhh-HHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 6799999999999999999999999999999987654 1 111 1122222222 22 246777665 68
Q ss_pred EEEeCCC-CEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccC
Q 013546 188 IGIDTDK-HEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSEN 266 (441)
Q Consensus 188 ~~id~~~-~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~ 266 (441)
.+++.+. ..+.+...+ + .++++|.||+|+|.+|+...+ +.+ .. .+
T Consensus 232 ~~i~~~~~~~~~v~~~~-g--------~~i~~D~vv~a~G~~p~~~~l-~~~-----------------~~--gl----- 277 (450)
T 1ges_A 232 KAVVKNTDGSLTLELED-G--------RSETVDCLIWAIGREPANDNI-NLE-----------------AA--GV----- 277 (450)
T ss_dssp EEEEECTTSCEEEEETT-S--------CEEEESEEEECSCEEESCTTS-CHH-----------------HH--TC-----
T ss_pred EEEEEeCCcEEEEEECC-C--------cEEEcCEEEECCCCCcCCCCC-Cch-----------------hc--Cc-----
Confidence 8887643 223333211 1 278999999999999876422 110 00 11
Q ss_pred CCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 267 PGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 267 ~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
++ +.. |+|.||+++|| +.|+|||+|||+ + .++++..|++||+.+|.||.
T Consensus 278 ------~~------------~~~-g~i~vd~~~~t-~~~~IyA~GD~~------~---~~~~~~~A~~~g~~aa~~i~ 326 (450)
T 1ges_A 278 ------KT------------NEK-GYIVVDKYQNT-NIEGIYAVGDNT------G---AVELTPVAVAAGRRLSERLF 326 (450)
T ss_dssp ------CB------------CTT-SCBCCCTTSBC-SSTTEEECSGGG------T---SCCCHHHHHHHHHHHHHHHH
T ss_pred ------eE------------CCC-CCEeECCCCcc-CCCCEEEEeccC------C---CCccHHHHHHHHHHHHHHHc
Confidence 11 111 78999999999 999999999998 2 36789999999999999997
No 135
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.38 E-value=2e-07 Score=85.76 Aligned_cols=36 Identities=8% Similarity=0.065 Sum_probs=33.7
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
.+|+|||||||||+||..|++.|++|+|||+++.++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 579999999999999999999999999999998764
No 136
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.38 E-value=4e-07 Score=93.47 Aligned_cols=164 Identities=22% Similarity=0.298 Sum_probs=112.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++. + . .+.++...+.+. +.+..++.++.+ .+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~--------~-~d~~~~~~l~~~---l~~~~gv~i~~~~~v 239 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA--P--------T-LDEDVTNALVGA---LAKNEKMKFMTSTKV 239 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--T--------T-SCHHHHHHHHHH---HHHHTCCEEECSCEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc--c--------c-CCHHHHHHHHHH---HhhcCCcEEEeCCEE
Confidence 6799999999999999999999999999999998654 1 1 111222223332 302347777764 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++.+.+.+.+.....+ ++..++++|.||+|+|.+|+...+ +.+ .. .+.
T Consensus 240 ~~i~~~~~~~~v~~~~~~-----g~~~~i~~D~vv~a~G~~p~~~~l-~l~-----------------~~--gl~----- 289 (468)
T 2qae_A 240 VGGTNNGDSVSLEVEGKN-----GKRETVTCEALLVSVGRRPFTGGL-GLD-----------------KI--NVA----- 289 (468)
T ss_dssp EEEEECSSSEEEEEECC--------EEEEEESEEEECSCEEECCTTS-CHH-----------------HH--TCC-----
T ss_pred EEEEEcCCeEEEEEEcCC-----CceEEEECCEEEECCCcccCCCCC-Cch-----------------hc--CCc-----
Confidence 888765543333321000 112478999999999999876422 110 00 111
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
+ +.. |+|.||+++|| +.|+|||+|||+.. .|+++..|++||+.+|.||.
T Consensus 290 ------~------------~~~-G~i~vd~~~~t-~~~~IyA~GD~~~~--------~~~~~~~A~~~g~~aa~~i~ 338 (468)
T 2qae_A 290 ------K------------NER-GFVKIGDHFET-SIPDVYAIGDVVDK--------GPMLAHKAEDEGVACAEILA 338 (468)
T ss_dssp ------B------------CTT-SCBCCCTTSBC-SSTTEEECGGGBSS--------SCSCHHHHHHHHHHHHHHHT
T ss_pred ------c------------CCC-CCEeECCCccc-CCCCEEEeeccCCC--------CCccHhHHHHHHHHHHHHHc
Confidence 1 111 78999999999 99999999999921 46799999999999999997
No 137
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.38 E-value=2.5e-07 Score=94.95 Aligned_cols=159 Identities=24% Similarity=0.301 Sum_probs=112.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++. + . .+.++...+.+. +. ..++.++.+ .+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l--~--------~-~~~~~~~~l~~~---l~-~~gv~i~~~~~v 241 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV--P--------T-MDAEIRKQFQRS---LE-KQGMKFKLKTKV 241 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS--T--------T-SCHHHHHHHHHH---HH-HSSCCEECSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--c--------c-ccHHHHHHHHHH---HH-HcCCEEEeCCEE
Confidence 6799999999999999999999999999999998654 1 1 111122222222 22 346777654 78
Q ss_pred EEEeCCCCEEE--EEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCC--CCcccccccccCHhHHHHHHHHHHHhccc
Q 013546 188 IGIDTDKHEVY--CETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGI--KGVKENAYFLREVNHAQEIRKKLLLNLML 263 (441)
Q Consensus 188 ~~id~~~~~v~--~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~i--pG~~~~~~~l~~~~~a~~~~~~i~~~~~~ 263 (441)
.+++.+.+.+. +.+..+ ++..++++|.||+|+|.+|+...+ ...
T Consensus 242 ~~i~~~~~~~~v~~~~~~~------g~~~~~~~D~vv~a~G~~p~~~~l~~~~~-------------------------- 289 (470)
T 1dxl_A 242 VGVDTSGDGVKLTVEPSAG------GEQTIIEADVVLVSAGRTPFTSGLNLDKI-------------------------- 289 (470)
T ss_dssp EEEECSSSSEEEEEEESSS------CCCEEEEESEEECCCCEEECCTTSCCTTT--------------------------
T ss_pred EEEEEcCCeEEEEEEecCC------CcceEEECCEEEECCCCCcCCCCCCchhc--------------------------
Confidence 88887654333 332101 112478999999999999876532 111
Q ss_pred ccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHH
Q 013546 264 SENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELF 343 (441)
Q Consensus 264 a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI 343 (441)
++++ +.. |+|.||++||| +.|+|||+|||+. .++++..|++||+.+|.||
T Consensus 290 -------gl~~------------~~~-G~i~vd~~~~t-~~~~Iya~GD~~~---------~~~~~~~A~~~g~~aa~~i 339 (470)
T 1dxl_A 290 -------GVET------------DKL-GRILVNERFST-NVSGVYAIGDVIP---------GPMLAHKAEEDGVACVEYL 339 (470)
T ss_dssp -------TCCB------------CSS-SCBCCCTTCBC-SSTTEEECSTTSS---------SCCCHHHHHHHHHHHHHHH
T ss_pred -------CCcc------------CCC-CCEeECcCCcc-CCCCEEEEeccCC---------CCccHHHHHHHHHHHHHHH
Confidence 0111 011 78999999999 9999999999992 3678999999999999999
Q ss_pred H
Q 013546 344 N 344 (441)
Q Consensus 344 ~ 344 (441)
.
T Consensus 340 ~ 340 (470)
T 1dxl_A 340 A 340 (470)
T ss_dssp T
T ss_pred c
Confidence 7
No 138
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.38 E-value=6.6e-07 Score=92.49 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=68.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++.- ...+.++...+.+. +. ..++.++.+ .+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~----------~~~~~~~~~~l~~~---l~-~~GV~i~~~~~v 259 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA----------GYYDRDLTDLMAKN---ME-EHGIQLAFGETV 259 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT----------TTSCHHHHHHHHHH---HH-TTTCEEEETCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh----------hHHHHHHHHHHHHH---HH-hCCeEEEeCCEE
Confidence 67999999999999999999999999999999886541 01111222222222 33 357887765 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+++.+.+...+.. + + .++++|.||+|+|.+|+..
T Consensus 260 ~~i~~~~~v~~v~~-~-g--------~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 260 KEVAGNGKVEKIIT-D-K--------NEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EEEECSSSCCEEEE-S-S--------CEEECSEEEECCCEEECCG
T ss_pred EEEEcCCcEEEEEE-C-C--------cEEECCEEEECCCCCcChH
Confidence 88876432211222 1 1 3789999999999998765
No 139
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.36 E-value=7.9e-07 Score=89.14 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=34.1
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
++..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 34569999999999999999999999999999998643
No 140
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.35 E-value=2.2e-06 Score=83.13 Aligned_cols=158 Identities=16% Similarity=0.175 Sum_probs=114.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+... . .+.+ .+.+..++.++.+ .+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------~----~~~~---~l~~~~gv~i~~~~~v 211 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRAN-------------K----VAQA---RAFANPKMKFIWDTAV 211 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC-------------H----HHHH---HHHTCTTEEEECSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcc-------------h----HHHH---HHHhcCCceEecCCce
Confidence 579999999999999999999999999999998754310 0 1111 1333457887654 78
Q ss_pred EEEeCCCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhccccc
Q 013546 188 IGIDTDKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSE 265 (441)
Q Consensus 188 ~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~ 265 (441)
.+++.+.+ .+.+.+..+ +++.++++|.||+|+|.+|+...+... +
T Consensus 212 ~~i~~~~~v~~v~~~~~~~------g~~~~i~~D~vi~a~G~~p~~~~l~~~-----------------------~---- 258 (325)
T 2q7v_A 212 EEIQGADSVSGVKLRNLKT------GEVSELATDGVFIFIGHVPNTAFVKDT-----------------------V---- 258 (325)
T ss_dssp EEEEESSSEEEEEEEETTT------CCEEEEECSEEEECSCEEESCGGGTTT-----------------------S----
T ss_pred EEEccCCcEEEEEEEECCC------CcEEEEEcCEEEEccCCCCChHHHhhh-----------------------c----
Confidence 88876543 455553211 223478999999999998875322110 0
Q ss_pred CCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013546 266 NPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNK 345 (441)
Q Consensus 266 ~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~ 345 (441)
+ ++.. |+|.||+++|| +.|+|||+|||+.. .|+++..|++||+.+|.||.+
T Consensus 259 -------~------------~~~~-g~i~vd~~~~t-~~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 259 -------S------------LRDD-GYVDVRDEIYT-NIPMLFAAGDVSDY--------IYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp -------C------------BCTT-SCBCCBTTTBC-SSTTEEECSTTTCS--------SCCCHHHHHHHHHHHHHHHHH
T ss_pred -------c------------cCCC-ccEecCCCCcc-CCCCEEEeecccCc--------cHHHHHHHHHHHHHHHHHHHH
Confidence 0 0011 78999999999 99999999999932 267899999999999999999
Q ss_pred Hhc
Q 013546 346 KIG 348 (441)
Q Consensus 346 ~l~ 348 (441)
.|.
T Consensus 310 ~l~ 312 (325)
T 2q7v_A 310 QLA 312 (325)
T ss_dssp HHH
T ss_pred HHH
Confidence 996
No 141
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.35 E-value=6.8e-07 Score=91.30 Aligned_cols=101 Identities=12% Similarity=0.263 Sum_probs=69.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+||++++.+++.- ...+.++...+.+. +. ..++.++.+ .|
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~~~~~~~~~~l~~~---l~-~~Gv~i~~~~~v 214 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY----------KYFDKEFTDILAKD---YE-AHGVNLVLGSKV 214 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT----------TTSCHHHHHHHHHH---HH-HTTCEEEESSCE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh----------hhhhhhHHHHHHHH---HH-HCCCEEEcCCee
Confidence 67999999999999999999999999999999886541 00111122222222 22 347777765 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+++.+++.+.....+ + .++++|.||+|+|.+|+..
T Consensus 215 ~~i~~~~~~v~~v~~~-g--------~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 215 AAFEEVDDEIITKTLD-G--------KEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EEEEEETTEEEEEETT-S--------CEEEESEEEECCCEEECCG
T ss_pred EEEEcCCCeEEEEEeC-C--------CEEECCEEEECcCCCCCHH
Confidence 8887534444321211 1 3789999999999998765
No 142
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.35 E-value=9.9e-07 Score=88.57 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=33.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.++..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 344679999999999999999999999999999998754
No 143
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.34 E-value=2.2e-07 Score=99.67 Aligned_cols=93 Identities=9% Similarity=0.121 Sum_probs=68.8
Q ss_pred cccCCCcccCCCcccccccccCcCCCCcCCCcccCccchhhhhcccccccccCCCCC-CCCCCCCCCcEEEECCCHHHHH
Q 013546 45 VSRNSSLSYLPSSIRMTTHMSSWSRGIKTTPHYQYHNAERIVEESESEYQELSYPGL-EATKPGEKPRVVVLGTGWGACR 123 (441)
Q Consensus 45 ~~~~~~~~~~~grvcp~~ce~~c~~~~~~~~~~~~~~~e~~i~~~~~~~~~~~~~~~-~~~~~~~~k~VvIIGgG~aGl~ 123 (441)
+...|++.++| +..|...+.+++..+ |+.+..+++++.++++.+ .++.++ .++....+++|+|||+|++|++
T Consensus 49 ~w~~~~~~~~~----~~~~~~~~~r~~~~~-~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~viG~G~~gl~ 121 (662)
T 2z3y_A 49 LWLDNPKIQLT----FEATLQQLEAPYNSD-TVLVHRVHSYLERHGLIN--FGIYKRIKPLPTKKTGKVIIIGSGVSGLA 121 (662)
T ss_dssp HHHTCTTBCCC----HHHHHHHSCTTGGGC-HHHHHHHHHHHHHTTSSS--CSSCBCSSCCCSSCCCEEEEECCBHHHHH
T ss_pred HHHHCCCcccC----HHHHHHhcCCCccCC-hHHHHHHHHHHHHHHHHh--cCCccccCCCcccCCCeEEEECcCHHHHH
Confidence 34678888877 344666667776544 567778999999976553 233322 1223345789999999999999
Q ss_pred HHHhhccCCCeEEEEcCCCCc
Q 013546 124 FLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 124 aA~~L~~~g~~Vtvie~~~~~ 144 (441)
+|..|++.|++|+|+|+.++.
T Consensus 122 ~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 122 AARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp HHHHHHHTTCEEEEECSSSSS
T ss_pred HHHHHHHCCCeEEEEecCCCC
Confidence 999999999999999998764
No 144
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.33 E-value=4.2e-07 Score=93.68 Aligned_cols=100 Identities=8% Similarity=0.111 Sum_probs=68.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++. + ..+ .++...+.+. +. ..++.++.+ .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~--------~~d-~~~~~~l~~~---l~-~~Gv~i~~~~~v 249 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL--R--------KFD-ECIQNTITDH---YV-KEGINVHKLSKI 249 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC--T--------TSC-HHHHHHHHHH---HH-HHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc--c--------ccC-HHHHHHHHHH---HH-hCCeEEEeCCEE
Confidence 6799999999999999999999999999999988654 1 111 1122222222 22 246777665 68
Q ss_pred EEEeCCCCE--EEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKHE--VYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~~--v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++.+.+. +.+...+ ++ .++++|.||+|+|.+|+.
T Consensus 250 ~~i~~~~~~~~~~v~~~~-------G~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 250 VKVEKNVETDKLKIHMND-------SK-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EEEEECC-CCCEEEEETT-------SC-EEEEESEEEECSCEEECC
T ss_pred EEEEEcCCCcEEEEEECC-------Cc-EEEEcCEEEECCCCCCcc
Confidence 888754322 3333211 11 378999999999999886
No 145
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.33 E-value=9.2e-07 Score=92.11 Aligned_cols=164 Identities=15% Similarity=0.170 Sum_probs=107.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++. .+. + .. +.++...+.+. +. ..++.++.+ .+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l--~--------~~-d~~~~~~~~~~---l~-~~GV~v~~~~~v 273 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILL--R--------GF-DQDMANKIGEH---ME-EHGIKFIRQFVP 273 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS--T--------TS-CHHHHHHHHHH---HH-HTTCEEEESEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccc--c--------cC-CHHHHHHHHHH---HH-HCCCEEEeCCeE
Confidence 568999999999999999999999999999984 222 0 11 11222223222 22 347777655 44
Q ss_pred EEEeCC----CCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhccc
Q 013546 188 IGIDTD----KHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLML 263 (441)
Q Consensus 188 ~~id~~----~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~ 263 (441)
..+... .+.+.+.....++ ++..++++|.|++|+|.+|+...+. .+.
T Consensus 274 ~~v~~~~~~~~~~~~v~~~~~~g----~~~~~~~~D~vi~a~G~~p~~~~l~-l~~------------------------ 324 (519)
T 3qfa_A 274 IKVEQIEAGTPGRLRVVAQSTNS----EEIIEGEYNTVMLAIGRDACTRKIG-LET------------------------ 324 (519)
T ss_dssp EEEEEEECCTTCEEEEEEEESSS----SCEEEEEESEEEECSCEEESCSSSC-STT------------------------
T ss_pred EEEEEccCCCCceEEEEEEECCC----cEEEEEECCEEEEecCCcccCCCCC-hhh------------------------
Confidence 444321 1333333211110 1123678999999999998865321 100
Q ss_pred ccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHH
Q 013546 264 SENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELF 343 (441)
Q Consensus 264 a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI 343 (441)
. ++++ +.+-|+|.||+++|| +.|+|||+|||+. | .|+++..|+.||+++|+||
T Consensus 325 ~------gl~~------------~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~-----g---~~~~~~~A~~~g~~aa~~i 377 (519)
T 3qfa_A 325 V------GVKI------------NEKTGKIPVTDEEQT-NVPYIYAIGDILE-----D---KVELTPVAIQAGRLLAQRL 377 (519)
T ss_dssp T------TCCC------------CTTTCCBCCCTTSBC-SSTTEEECGGGBS-----S---SCCCHHHHHHHHHHHHHHH
T ss_pred c------CcEE------------cCCCCeEeeCCCCcc-CCCCEEEEEeccC-----C---CCccHHHHHHHHHHHHHHH
Confidence 0 0111 111178999999999 9999999999982 2 4789999999999999999
Q ss_pred H
Q 013546 344 N 344 (441)
Q Consensus 344 ~ 344 (441)
.
T Consensus 378 ~ 378 (519)
T 3qfa_A 378 Y 378 (519)
T ss_dssp H
T ss_pred c
Confidence 7
No 146
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.33 E-value=4.9e-07 Score=92.79 Aligned_cols=156 Identities=19% Similarity=0.233 Sum_probs=111.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++. + .+..+...+.+. +. ..++.++.+ .|
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~----------~~~~~~~~l~~~---l~-~~Gv~i~~~~~v 239 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF--R----------EDPAIGEAVTAA---FR-AEGIEVLEHTQA 239 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--T----------SCHHHHHHHHHH---HH-HTTCEEETTCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC--C----------CCHHHHHHHHHH---HH-hCCCEEEcCCEE
Confidence 6799999999999999999999999999999988654 1 111122222222 22 246777654 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++.+.+.+.+... ..++++|.||+|+|..|+...+ +.+.. .
T Consensus 240 ~~i~~~~~~~~v~~~----------~~~i~aD~Vv~a~G~~p~~~~l-~l~~~-------------------g------- 282 (467)
T 1zk7_A 240 SQVAHMDGEFVLTTT----------HGELRADKLLVATGRTPNTRSL-ALDAA-------------------G------- 282 (467)
T ss_dssp EEEEEETTEEEEEET----------TEEEEESEEEECSCEEESCTTS-CGGGG-------------------T-------
T ss_pred EEEEEeCCEEEEEEC----------CcEEEcCEEEECCCCCcCCCcC-Cchhc-------------------C-------
Confidence 888765555444331 1378999999999999876422 11000 0
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
+++ +.. |+|.||+++|| +.|+|||+|||+. .|.+++.|++||+.+|.||.
T Consensus 283 ----l~~------------~~~-G~i~vd~~~~t-~~~~iya~GD~~~---------~~~~~~~A~~~g~~aa~~i~ 332 (467)
T 1zk7_A 283 ----VTV------------NAQ-GAIVIDQGMRT-SNPNIYAAGDCTD---------QPQFVYVAAAAGTRAAINMT 332 (467)
T ss_dssp ----CCB------------CTT-SCBCCCTTCBC-SSTTEEECSTTBS---------SCCCHHHHHHHHHHHHHHHT
T ss_pred ----CcC------------CCC-CCEEECCCccc-CCCCEEEEeccCC---------CcccHHHHHHHHHHHHHHHc
Confidence 011 111 78999999999 9999999999993 35689999999999999997
No 147
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.33 E-value=2.1e-06 Score=82.43 Aligned_cols=158 Identities=17% Similarity=0.126 Sum_probs=114.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+|+++++.+.+.+. ..+.+. +.+..++.++.+ .+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----------------~~~~~~---l~~~~gv~v~~~~~v 203 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD-----------------QVLQDK---LRSLKNVDIILNAQT 203 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCSC-----------------HHHHHH---HHTCTTEEEESSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCcc-----------------HHHHHH---HhhCCCeEEecCCce
Confidence 679999999999999999999999999999998754211 011111 333357777654 78
Q ss_pred EEEeCCCC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccc
Q 013546 188 IGIDTDKH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLS 264 (441)
Q Consensus 188 ~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a 264 (441)
.+++.+.+ .+.+.+..+ +++.++++|.||+|+|..|+...+.. . +
T Consensus 204 ~~i~~~~~~v~~v~~~~~~~------g~~~~i~~D~vi~a~G~~p~~~~l~~----~-------------------l--- 251 (310)
T 1fl2_A 204 TEVKGDGSKVVGLEYRDRVS------GDIHNIELAGIFVQIGLLPNTNWLEG----A-------------------V--- 251 (310)
T ss_dssp EEEEESSSSEEEEEEEETTT------CCEEEEECSEEEECSCEEESCGGGTT----T-------------------S---
T ss_pred EEEEcCCCcEEEEEEEECCC------CcEEEEEcCEEEEeeCCccCchHHhc----c-------------------c---
Confidence 88876543 355554211 22347899999999999887532111 0 0
Q ss_pred cCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 265 ENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 265 ~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
++ +.. |+|.||+++|| +.|+|||+|||+.. .++++..|+.||+.+|.||.
T Consensus 252 --------~~------------~~~-g~i~vd~~~~t-~~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~ 301 (310)
T 1fl2_A 252 --------ER------------NRM-GEIIIDAKCET-NVKGVFAAGDCTTV--------PYKQIIIATGEGAKASLSAF 301 (310)
T ss_dssp --------CB------------CTT-SCBCCCTTCBC-SSTTEEECSTTBSC--------SSCCHHHHHHHHHHHHHHHH
T ss_pred --------cc------------cCC-CcEEcCCCCcc-CCCCEEEeecccCC--------cchhhhhhHhhHHHHHHHHH
Confidence 00 011 78999999998 99999999999932 23689999999999999999
Q ss_pred HHhc
Q 013546 345 KKIG 348 (441)
Q Consensus 345 ~~l~ 348 (441)
++|.
T Consensus 302 ~~l~ 305 (310)
T 1fl2_A 302 DYLI 305 (310)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 148
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.33 E-value=2.6e-07 Score=101.43 Aligned_cols=93 Identities=9% Similarity=0.088 Sum_probs=67.9
Q ss_pred cccCCCcccCCCcccccccccCcCCCCcCCCcccCccchhhhhcccccccccCCCCCC-CCCCCCCCcEEEECCCHHHHH
Q 013546 45 VSRNSSLSYLPSSIRMTTHMSSWSRGIKTTPHYQYHNAERIVEESESEYQELSYPGLE-ATKPGEKPRVVVLGTGWGACR 123 (441)
Q Consensus 45 ~~~~~~~~~~~grvcp~~ce~~c~~~~~~~~~~~~~~~e~~i~~~~~~~~~~~~~~~~-~~~~~~~k~VvIIGgG~aGl~ 123 (441)
++..|+.+++++..| ...|.++.... ++.+..+++++.++++.+ .++.++. ++....+++|+|||+|++||+
T Consensus 220 ~w~~~P~~a~~~~~~----~~~~~r~~~~~-p~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~viG~G~aGl~ 292 (852)
T 2xag_A 220 LWLDNPKIQLTFEAT----LQQLEAPYNSD-TVLVHRVHSYLERHGLIN--FGIYKRIKPLPTKKTGKVIIIGSGVSGLA 292 (852)
T ss_dssp HHHTCTTBCCCHHHH----HHHCCTTTTSC-HHHHHHHHHHHHHTTSSS--CSSCBCSSCCCSSCCCEEEEECCSHHHHH
T ss_pred HHhcCCHHHhhHHHH----HHhCCCcccCC-cHHHHHHHHHHHHHHHHh--cCcccccCCcccCCCCeEEEECCCHHHHH
Confidence 456788888776544 44566775434 567888999999966543 1222211 222345789999999999999
Q ss_pred HHHhhccCCCeEEEEcCCCCc
Q 013546 124 FLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 124 aA~~L~~~g~~Vtvie~~~~~ 144 (441)
+|..|++.|++|+|+|+.+++
T Consensus 293 ~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 293 AARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp HHHHHHHTTCEEEEECSSSSS
T ss_pred HHHHHHHCCCcEEEEEecCcC
Confidence 999999999999999998764
No 149
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.33 E-value=5.5e-07 Score=90.89 Aligned_cols=98 Identities=16% Similarity=0.301 Sum_probs=68.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE-EEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL-ASC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 187 (441)
+++|+|||+|+.|+++|..|.+.|.+||++++.+++.-. .+ + ..+...+.+. + +..++.++. ..+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~-~~--------~-~~~~~~l~~~---l-~~~GV~i~~~~~v 208 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR-VL--------G-RRIGAWLRGL---L-TELGVQVELGTGV 208 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH-HH--------C-HHHHHHHHHH---H-HHHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh-hc--------C-HHHHHHHHHH---H-HHCCCEEEeCCEE
Confidence 679999999999999999999999999999998865410 00 1 1122222222 2 224777774 478
Q ss_pred EEEeCCCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++.+.+ .+.+.++ .++++|.||+|+|..|+.
T Consensus 209 ~~i~~~~~~~~v~~~dg-----------~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 209 VGFSGEGQLEQVMASDG-----------RSFVADSALICVGAEPAD 243 (410)
T ss_dssp EEEECSSSCCEEEETTS-----------CEEECSEEEECSCEEECC
T ss_pred EEEeccCcEEEEEECCC-----------CEEEcCEEEEeeCCeecH
Confidence 88876554 3443331 378999999999998875
No 150
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.32 E-value=3.4e-07 Score=91.08 Aligned_cols=93 Identities=14% Similarity=0.279 Sum_probs=66.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||++|+++|..|++.|.+||++++.+++. + .+ .++...+.+. +. ..++.++.+ .+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~---------~~-~~~~~~l~~~---l~-~~gV~i~~~~~v 206 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL--G---------LD-EELSNMIKDM---LE-ETGVKFFLNSEL 206 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT--T---------CC-HHHHHHHHHH---HH-HTTEEEECSCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec--c---------CC-HHHHHHHHHH---HH-HCCCEEEcCCEE
Confidence 4799999999999999999999999999999988654 1 11 1122222222 22 357887765 68
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++ .+.+.++++ . +++|.||+|+|.+|+.
T Consensus 207 ~~i~--~~~v~~~~g-----------~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 207 LEAN--EEGVLTNSG-----------F-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp EEEC--SSEEEETTE-----------E-EECSCEEEECCEEECC
T ss_pred EEEE--eeEEEECCC-----------E-EEcCEEEECcCCCcCH
Confidence 8886 345555331 3 8999999999999875
No 151
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.32 E-value=7.7e-07 Score=91.35 Aligned_cols=159 Identities=20% Similarity=0.224 Sum_probs=109.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++.- ...+.++...+.+. +. +.++.+ .+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------~~~d~~~~~~l~~~---l~----v~i~~~~~v 234 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI----------TLEDQDIVNTLLSI---LK----LNIKFNSPV 234 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT----------TSCCHHHHHHHHHH---HC----CCEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC----------CCCCHHHHHHHHhc---CE----EEEEECCEE
Confidence 67999999999999999999999999999999886541 11011122222222 11 444443 56
Q ss_pred EEEeCCC-CEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccC
Q 013546 188 IGIDTDK-HEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSEN 266 (441)
Q Consensus 188 ~~id~~~-~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~ 266 (441)
.+++.+. +.+.+..... ++++.++++|.||+|+|.+|+.. + +.++. .
T Consensus 235 ~~i~~~~~~~v~v~~~~~-----~G~~~~i~~D~vi~a~G~~p~~~-l-~l~~~-------------------g------ 282 (466)
T 3l8k_A 235 TEVKKIKDDEYEVIYSTK-----DGSKKSIFTNSVVLAAGRRPVIP-E-GAREI-------------------G------ 282 (466)
T ss_dssp EEEEEEETTEEEEEECCT-----TSCCEEEEESCEEECCCEEECCC-T-TTGGG-------------------T------
T ss_pred EEEEEcCCCcEEEEEEec-----CCceEEEEcCEEEECcCCCcccc-c-chhhc-------------------C------
Confidence 6776544 4554443210 12234789999999999998765 2 11000 0
Q ss_pred CCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013546 267 PGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNK 345 (441)
Q Consensus 267 ~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~ 345 (441)
+++ +.. | |.||+++|| +.|+|||+|||+. .|+++..|+.||+.+|+||..
T Consensus 283 -----l~~------------~~~-G-i~vd~~~~t-~~~~Iya~GD~~~---------~~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 283 -----LSI------------SKT-G-IVVDETMKT-NIPNVFATGDANG---------LAPYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp -----CCB------------CSS-S-BCCCTTCBC-SSTTEEECGGGTC---------SCCSHHHHHHHHHHHHHHHHT
T ss_pred -----cee------------CCC-C-EeECCCccC-CCCCEEEEEecCC---------CCccHhHHHHHHHHHHHHHhC
Confidence 111 111 7 999999999 9999999999992 378999999999999999983
No 152
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.32 E-value=2.7e-06 Score=82.56 Aligned_cols=158 Identities=18% Similarity=0.105 Sum_probs=114.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE-EEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL-ASC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+|+++++.+.+... ..+.+ .+.+..++.++. ..+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~-----------------~~~~~---~~~~~~gv~i~~~~~v 218 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRAS-----------------KIMQQ---RALSNPKIDVIWNSSV 218 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCSC-----------------HHHHH---HHHTCTTEEEECSEEE
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCcc-----------------HHHHH---HHHhCCCeeEecCCce
Confidence 679999999999999999999999999999998754310 01111 122345788775 478
Q ss_pred EEEeCCCC-----EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcc
Q 013546 188 IGIDTDKH-----EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLM 262 (441)
Q Consensus 188 ~~id~~~~-----~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~ 262 (441)
.+++.+.+ .+.+.+..+ ++..++++|.||+|+|.+|+...+.. .+
T Consensus 219 ~~i~~~~~~~~v~~v~~~~~~~------g~~~~i~~D~vi~a~G~~p~~~~~~~-----------------------~l- 268 (333)
T 1vdc_A 219 VEAYGDGERDVLGGLKVKNVVT------GDVSDLKVSGLFFAIGHEPATKFLDG-----------------------GV- 268 (333)
T ss_dssp EEEEESSSSSSEEEEEEEETTT------CCEEEEECSEEEECSCEEESCGGGTT-----------------------SS-
T ss_pred EEEeCCCCccceeeEEEEecCC------CceEEEecCEEEEEeCCccchHHhhc-----------------------cc-
Confidence 88876552 255654211 22347899999999999987542210 00
Q ss_pred cccCCCCceeEeeCceEEEEccCCcccCCceeeCCC-cccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHH
Q 013546 263 LSENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEW-LRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAE 341 (441)
Q Consensus 263 ~a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~-lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~ 341 (441)
++ +.. |+|.||++ ++| +.|+|||+|||+.. .+.++..|+.||+.||.
T Consensus 269 ----------~~------------~~~-G~i~vd~~~~~t-~~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~ 316 (333)
T 1vdc_A 269 ----------EL------------DSD-GYVVTKPGTTQT-SVPGVFAAGDVQDK--------KYRQAITAAGTGCMAAL 316 (333)
T ss_dssp ----------CB------------CTT-SCBCCCTTSCBC-SSTTEEECGGGGCS--------SCCCHHHHHHHHHHHHH
T ss_pred ----------cc------------cCC-CCEEechhhccc-CCCCEEEeeeccCC--------CchhHHHHHHhHHHHHH
Confidence 00 111 78999997 577 99999999999932 24789999999999999
Q ss_pred HHHHHhc
Q 013546 342 LFNKKIG 348 (441)
Q Consensus 342 nI~~~l~ 348 (441)
||.+.|.
T Consensus 317 ~i~~~l~ 323 (333)
T 1vdc_A 317 DAEHYLQ 323 (333)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999996
No 153
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.32 E-value=9.3e-07 Score=91.11 Aligned_cols=102 Identities=15% Similarity=0.189 Sum_probs=67.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.. +. + .. +.++...+.+. +. ..++.++.+ .+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l--~--------~~-d~~~~~~l~~~---l~-~~Gv~i~~~~~v 250 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI-VL--R--------GF-DQQMAELVAAS---ME-ERGIPFLRKTVP 250 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-SS--T--------TS-CHHHHHHHHHH---HH-HTTCCEEETEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-CC--c--------cc-CHHHHHHHHHH---HH-hCCCEEEeCCEE
Confidence 6799999999999999999999999999998843 21 0 11 11222222222 22 346776654 68
Q ss_pred EEEeCCCC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+++...+ .+.+.+... ++..++++|.||+|+|.+|+..
T Consensus 251 ~~i~~~~~~~~~v~~~~~~~------~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 251 LSVEKQDDGKLLVKYKNVET------GEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEEEECTTSCEEEEEEETTT------CCEEEEEESEEEECSCEEECCG
T ss_pred EEEEEcCCCcEEEEEecCCC------CceeEEEcCEEEECcccccCcC
Confidence 88875332 344444321 1234789999999999988764
No 154
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.32 E-value=2.7e-06 Score=82.96 Aligned_cols=158 Identities=15% Similarity=0.114 Sum_probs=114.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+|+++++.+.+... ..+.+. +.+..++.++.+ .+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~-----------------~~~~~~---~~~~~gV~v~~~~~v 214 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS-----------------KIMLDR---ARNNDKIRFLTNHTV 214 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC-----------------TTHHHH---HHHCTTEEEECSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc-----------------HHHHHH---HhccCCcEEEeCcee
Confidence 679999999999999999999999999999988754310 111111 222357887754 78
Q ss_pred EEEeCCCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhccccc
Q 013546 188 IGIDTDKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSE 265 (441)
Q Consensus 188 ~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~ 265 (441)
.+++.+.+ .+.+.+..+ ++..++++|.||+|+|.+|+...+.. .+
T Consensus 215 ~~i~~~~~~~~v~~~~~~~------g~~~~i~~D~vi~a~G~~p~~~~~~~-----------------------~l---- 261 (335)
T 2a87_A 215 VAVDGDTTVTGLRVRDTNT------GAETTLPVTGVFVAIGHEPRSGLVRE-----------------------AI---- 261 (335)
T ss_dssp EEEECSSSCCEEEEEEETT------SCCEEECCSCEEECSCEEECCTTTBT-----------------------TB----
T ss_pred EEEecCCcEeEEEEEEcCC------CceEEeecCEEEEccCCccChhHhhc-----------------------cc----
Confidence 88876653 366654211 22347899999999999987643220 00
Q ss_pred CCCCceeEeeCceEEEEccCCcccCCceeeCCC-cccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 266 NPGDTVQLFSKYFVITITLSFLVRLSQIGVDEW-LRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 266 ~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~-lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
++ +.. |+|.||++ ++| +.|+|||+|||+.. .++++..|+.||+.+|.||.
T Consensus 262 -------~~------------~~~-G~i~vd~~~~~t-~~~~iya~GD~~~~--------~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 262 -------DV------------DPD-GYVLVQGRTTST-SLPGVFAAGDLVDR--------TYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp -------CB------------CTT-SCBCCSTTSSBC-SSTTEEECGGGTCC--------SCCCHHHHHHHHHHHHHHHH
T ss_pred -------cc------------CCC-ccEEeCCCCCcc-CCCCEEEeeecCCc--------cHHHHHHHHHhHHHHHHHHH
Confidence 00 111 78999996 577 99999999999932 25789999999999999999
Q ss_pred HHhc
Q 013546 345 KKIG 348 (441)
Q Consensus 345 ~~l~ 348 (441)
+.|.
T Consensus 313 ~~l~ 316 (335)
T 2a87_A 313 RWLA 316 (335)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9996
No 155
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.32 E-value=1.2e-06 Score=88.47 Aligned_cols=100 Identities=12% Similarity=0.091 Sum_probs=68.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|.+.|.+||++++.+++.- ......+...+.+. + +..+++++.+ .|
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~----------~~~~~~~~~~l~~~---l-~~~GV~i~~~~~v 217 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA----------RVAGEALSEFYQAE---H-RAHGVDLRTGAAM 217 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT----------TTSCHHHHHHHHHH---H-HHTTCEEEETCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh----------hhcCHHHHHHHHHH---H-HhCCCEEEECCEE
Confidence 67999999999999999999999999999999886541 10111122223222 2 2357777754 78
Q ss_pred EEEeCCCCEE-EEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKHEV-YCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~~v-~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++.++..+ .+...+ + .++++|.||+|+|..|+.
T Consensus 218 ~~i~~~~~~v~~v~l~d-G--------~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 218 DCIEGDGTKVTGVRMQD-G--------SVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp EEEEESSSBEEEEEESS-S--------CEEECSEEEECSCCEESC
T ss_pred EEEEecCCcEEEEEeCC-C--------CEEEcCEEEECCCCccCh
Confidence 8887654433 222211 1 378999999999999875
No 156
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.31 E-value=5.7e-07 Score=95.07 Aligned_cols=97 Identities=12% Similarity=0.187 Sum_probs=70.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+|+++++.+++.- . .+..+...+.+. +. ..++.++.+ .|
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------~-~~~~~~~~l~~~---l~-~~GV~i~~~~~v 251 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP----------P-IDYEMAAYVHEH---MK-NHDVELVFEDGV 251 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT----------T-SCHHHHHHHHHH---HH-HTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc----------c-CCHHHHHHHHHH---HH-HcCCEEEECCeE
Confidence 67999999999999999999999999999999886541 1 111222223222 22 347777654 78
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++.+.+.+.+.++ .++++|.||+|+|..|+.
T Consensus 252 ~~i~~~~~~v~~~~g-----------~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 252 DALEENGAVVRLKSG-----------SVIQTDMLILAIGVQPES 284 (588)
T ss_dssp EEEEGGGTEEEETTS-----------CEEECSEEEECSCEEECC
T ss_pred EEEecCCCEEEECCC-----------CEEEcCEEEEccCCCCCh
Confidence 888876666665432 378999999999998875
No 157
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.31 E-value=2.8e-06 Score=88.91 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.+|+|+|||+|..|+.+|..|++.+.+|+++++.+..
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 3789999999999999999999989999999988754
No 158
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.31 E-value=1.3e-06 Score=84.80 Aligned_cols=36 Identities=8% Similarity=0.097 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 358999999999999999999999999999998643
No 159
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.31 E-value=8.6e-07 Score=91.45 Aligned_cols=158 Identities=15% Similarity=0.218 Sum_probs=112.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE-EEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL-ASC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+|+++++.+++. + ..+ ..+...+.+. +. ..++.++. ..|
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l--~--------~~~-~~~~~~l~~~---l~-~~Gv~i~~~~~V 255 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL--R--------NFD-YDLRQLLNDA---MV-AKGISIIYEATV 255 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--T--------TSC-HHHHHHHHHH---HH-HHTCEEESSCCE
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc--c--------ccC-HHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 6799999999999999999999999999999988654 1 111 1122222222 22 24677766 478
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++.+.+.+.+...++ .++++|.||+|+|.+|+...+. . + .. .+
T Consensus 256 ~~i~~~~~~v~v~~~~g---------~~i~aD~Vi~A~G~~p~~~~l~-l----------~-------~~--g~------ 300 (484)
T 3o0h_A 256 SQVQSTENCYNVVLTNG---------QTICADRVMLATGRVPNTTGLG-L----------E-------RA--GV------ 300 (484)
T ss_dssp EEEEECSSSEEEEETTS---------CEEEESEEEECCCEEECCTTCC-H----------H-------HH--TC------
T ss_pred EEEEeeCCEEEEEECCC---------cEEEcCEEEEeeCCCcCCCCCC-h----------h-------hc--Cc------
Confidence 88877655454443211 3789999999999988764321 0 0 00 11
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
++ +.. |+|.||+++|| +.|+|||+|||+ + .++++..|+.||+.+|+||.
T Consensus 301 -----~~------------~~~-G~i~vd~~~~t-~~~~Iya~GD~~------~---~~~~~~~A~~~g~~aa~~i~ 349 (484)
T 3o0h_A 301 -----KV------------NEF-GAVVVDEKMTT-NVSHIWAVGDVT------G---HIQLTPVAIHDAMCFVKNAF 349 (484)
T ss_dssp -----CB------------CTT-SCBCCCTTSBC-SSTTEEECGGGG------T---SCCCHHHHHHHHHHHHHHHH
T ss_pred -----eE------------CCC-CCEeECCCCCC-CCCCEEEEEecC------C---CCcCHHHHHHHHHHHHHHHc
Confidence 11 111 78999999999 999999999999 2 46899999999999999998
No 160
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.30 E-value=2.8e-06 Score=82.36 Aligned_cols=158 Identities=15% Similarity=0.092 Sum_probs=114.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|.+.|.+|+++++.+.+.. . ..+.+ .+.+..++.++.+ .+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------------~----~~~~~---~l~~~~gv~i~~~~~v 232 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------------S----TIMQK---RAEKNEKIEILYNTVA 232 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------C----HHHHH---HHHHCTTEEEECSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------C----HHHHH---HHHhcCCeEEeeccee
Confidence 67999999999999999999999999999999875431 0 01111 1333347887754 78
Q ss_pred EEEeCCCC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccc
Q 013546 188 IGIDTDKH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLS 264 (441)
Q Consensus 188 ~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a 264 (441)
.+++.+.+ .+.+.+..+ ++..++++|.||+|+|..|+...+..
T Consensus 233 ~~i~~~~~~~~~v~~~~~~~------g~~~~i~~D~vi~a~G~~p~~~~~~~---------------------------- 278 (338)
T 3itj_A 233 LEAKGDGKLLNALRIKNTKK------NEETDLPVSGLFYAIGHTPATKIVAG---------------------------- 278 (338)
T ss_dssp EEEEESSSSEEEEEEEETTT------TEEEEEECSEEEECSCEEECCGGGBT----------------------------
T ss_pred EEEEcccCcEEEEEEEECCC------CceEEEEeCEEEEEeCCCCChhHhhC----------------------------
Confidence 88876654 255555211 22357899999999999886532110
Q ss_pred cCCCCceeEeeCceEEEEccCCcccCCceee-CCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHH
Q 013546 265 ENPGDTVQLFSKYFVITITLSFLVRLSQIGV-DEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELF 343 (441)
Q Consensus 265 ~~~G~~~vE~a~~v~V~il~~~~~~lG~I~V-d~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI 343 (441)
++++ +.. |+|.| |++++| +.|+|||+|||+. ..|+.+..|+.||+.||.||
T Consensus 279 ------~l~~------------~~~-G~i~v~~~~~~t-~~~~vya~GD~~~--------~~~~~~~~A~~~g~~aa~~i 330 (338)
T 3itj_A 279 ------QVDT------------DEA-GYIKTVPGSSLT-SVPGFFAAGDVQD--------SKYRQAITSAGSGCMAALDA 330 (338)
T ss_dssp ------TBCB------------CTT-SCBCCCTTSSBC-SSTTEEECGGGGC--------SSCCCHHHHHHHHHHHHHHH
T ss_pred ------ceEe------------cCC-CcEEEcCccccc-CCCCEEEeeccCC--------CCccceeeehhhhHHHHHHH
Confidence 0011 011 77884 888999 9999999999993 24688999999999999999
Q ss_pred HHHhc
Q 013546 344 NKKIG 348 (441)
Q Consensus 344 ~~~l~ 348 (441)
.+.|.
T Consensus 331 ~~~l~ 335 (338)
T 3itj_A 331 EKYLT 335 (338)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99996
No 161
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.30 E-value=6.7e-07 Score=89.62 Aligned_cols=36 Identities=11% Similarity=0.015 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 568999999999999999999999999999998753
No 162
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.30 E-value=1.1e-06 Score=92.24 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=68.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+++. + . ....+...+.+. + +..++.++.+ .+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~--------~-~~~~~~~~l~~~---l-~~~GV~i~~~~~v 215 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM--T--------P-VDREMAGFAHQA---I-RDQGVDLRLGTAL 215 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC--T--------T-SCHHHHHHHHHH---H-HHTTCEEEETCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc--h--------h-cCHHHHHHHHHH---H-HHCCCEEEeCCeE
Confidence 5799999999999999999999999999999988654 1 1 111122222222 2 2347777664 67
Q ss_pred EEEeC-------------------CCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDT-------------------DKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~-------------------~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++. ..+.+.+...+ ..++++|.||+|+|.+|+.
T Consensus 216 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---------g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 216 SEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSN---------GELLETDLLIMAIGVRPET 269 (565)
T ss_dssp EEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETT---------SCEEEESEEEECSCEEECC
T ss_pred EEEeccccccccccccccccccccCCCcEEEEEcC---------CCEEEcCEEEECcCCccch
Confidence 77765 34445444321 1378999999999998874
No 163
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.29 E-value=2.4e-06 Score=82.14 Aligned_cols=163 Identities=17% Similarity=0.098 Sum_probs=114.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+... . .+.+ .+.+..++.++.+ .+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------~----~~~~---~l~~~~gv~v~~~~~v 202 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCA-------------P----ITLE---HAKNNDKIEFLTPYVV 202 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSC-------------H----HHHH---HHHTCTTEEEETTEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCC-------------H----HHHH---HHhhCCCeEEEeCCEE
Confidence 579999999999999999999999999999998754310 0 0111 1333357877654 67
Q ss_pred EEEeCCCC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccc
Q 013546 188 IGIDTDKH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLS 264 (441)
Q Consensus 188 ~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a 264 (441)
.+++.+.+ .+.+....+ +++.++++|.||+|+|..|+...++...
T Consensus 203 ~~i~~~~~~v~~v~~~~~~~------g~~~~i~~D~vi~a~G~~p~~~~l~~~g-------------------------- 250 (311)
T 2q0l_A 203 EEIKGDASGVSSLSIKNTAT------NEKRELVVPGFFIFVGYDVNNAVLKQED-------------------------- 250 (311)
T ss_dssp EEEEEETTEEEEEEEEETTT------CCEEEEECSEEEECSCEEECCGGGBCTT--------------------------
T ss_pred EEEECCCCcEeEEEEEecCC------CceEEEecCEEEEEecCccChhhhhccc--------------------------
Confidence 77875533 345543111 2234789999999999998754222110
Q ss_pred cCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 265 ENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 265 ~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
...++++ +.. |+|.||+++|| +.|+|||+|||+.. .|+++..|+.||+.+|.||.
T Consensus 251 ---~~~~l~~------------~~~-g~i~vd~~~~t-~~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~ 305 (311)
T 2q0l_A 251 ---NSMLCKC------------DEY-GSIVVDFSMKT-NVQGLFAAGDIRIF--------APKQVVCAASDGATAALSVI 305 (311)
T ss_dssp ---SCBSSCB------------CTT-SCBCCCTTCBC-SSTTEEECSTTBTT--------CCCCHHHHHHHHHHHHHHHH
T ss_pred ---ccceeEe------------ccC-CCEEeCCcccc-CCCCeEEcccccCc--------chHHHHHHHHhHHHHHHHHH
Confidence 0000111 111 78999999999 99999999999932 26799999999999999999
Q ss_pred HHhc
Q 013546 345 KKIG 348 (441)
Q Consensus 345 ~~l~ 348 (441)
+.|.
T Consensus 306 ~~l~ 309 (311)
T 2q0l_A 306 SYLE 309 (311)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8885
No 164
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.28 E-value=9.4e-07 Score=85.06 Aligned_cols=100 Identities=12% Similarity=0.085 Sum_probs=62.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE-EEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL-ASC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 187 (441)
+++|+|||||+.|+++|..|++.|.+|||+++.+..... .. ...+ .....+...+. ..+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~-------------~~---~~~~----~~~~~~~~~~~~~~~ 211 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRAS-------------KT---MQER----VLNHPKIEVIWNSEL 211 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSC-------------HH---HHHH----HHTCTTEEEECSEEE
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccccc-------------ch---hhhh----hhcccceeeEeeeee
Confidence 679999999999999999999999999999987643210 00 0111 11122333322 233
Q ss_pred EEEe---CCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCC
Q 013546 188 IGID---TDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGI 234 (441)
Q Consensus 188 ~~id---~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~i 234 (441)
..+. .....+.+..... ++..++++|.|++|+|..|+...+
T Consensus 212 ~~i~~~~~~~~~~~~~~~~~------~~~~~i~~d~vi~a~G~~pn~~~l 255 (314)
T 4a5l_A 212 VELEGDGDLLNGAKIHNLVS------GEYKVVPVAGLFYAIGHSPNSKFL 255 (314)
T ss_dssp EEEEESSSSEEEEEEEETTT------CCEEEEECSEEEECSCEEESCGGG
T ss_pred EEEEeeeeccceeEEeeccc------ccceeeccccceEecccccChhHh
Confidence 3333 2223444544321 234579999999999999987643
No 165
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.28 E-value=1.7e-06 Score=84.04 Aligned_cols=101 Identities=12% Similarity=0.074 Sum_probs=69.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+|+++++.+.+... . .....+.+. +. ..++.++.+ .+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~------------~-~~~~~l~~~---l~-~~gv~v~~~~~v 214 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH------------E-ASVKELMKA---HE-EGRLEVLTPYEL 214 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC------------H-HHHHHHHHH---HH-TTSSEEETTEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc------------H-HHHHHHHhc---cc-cCCeEEecCCcc
Confidence 679999999999999999999999999999998765311 0 111112221 22 346777665 78
Q ss_pred EEEeCCCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+++.+++ .+.+....+ ++..++++|.||+|+|.+|+..
T Consensus 215 ~~i~~~~~~~~v~~~~~~~------g~~~~i~~D~vi~a~G~~p~~~ 255 (335)
T 2zbw_A 215 RRVEGDERVRWAVVFHNQT------QEELALEVDAVLILAGYITKLG 255 (335)
T ss_dssp EEEEESSSEEEEEEEETTT------CCEEEEECSEEEECCCEEEECG
T ss_pred eeEccCCCeeEEEEEECCC------CceEEEecCEEEEeecCCCCch
Confidence 88876544 455553211 2234789999999999998754
No 166
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.28 E-value=7.5e-07 Score=91.82 Aligned_cols=99 Identities=13% Similarity=0.088 Sum_probs=67.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||++|+++|..|++.|.+|+++++.+.+. + ..+ .++...+.+. +. ..++.++.+ .+
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~--------~~~-~~~~~~l~~~---l~-~~Gv~i~~~~~v 250 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG--T--------IYD-GDMAEYIYKE---AD-KHHIEILTNENV 250 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT--S--------SSC-HHHHHHHHHH---HH-HTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh--h--------cCC-HHHHHHHHHH---HH-HcCcEEEcCCEE
Confidence 6799999999999999999999999999999987543 1 111 1122222222 22 346777654 67
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+++.+.+...+... ..++++|.||+|+|..|+..
T Consensus 251 ~~i~~~~~v~~v~~~----------~~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 251 KAFKGNERVEAVETD----------KGTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEEEESSBEEEEEET----------TEEEECSEEEECSCEEESCG
T ss_pred EEEEcCCcEEEEEEC----------CCEEEcCEEEECcCCCcChH
Confidence 888765433223221 13789999999999988754
No 167
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.28 E-value=2.1e-06 Score=82.81 Aligned_cols=161 Identities=18% Similarity=0.167 Sum_probs=113.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+|+++++.+.+... ......+.+ .+ +..+++++.+ .+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------~~~~~~l~~---~l-~~~gv~i~~~~~v 207 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAE-------------KILIKRLMD---KV-ENGNIILHTNRTL 207 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCC-------------HHHHHHHHH---HH-HTSSEEEECSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccC-------------HHHHHHHHH---hc-ccCCeEEEcCcee
Confidence 679999999999999999999999999999998754311 011111111 12 2357887754 78
Q ss_pred EEEeCCCCE---EEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccc
Q 013546 188 IGIDTDKHE---VYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLS 264 (441)
Q Consensus 188 ~~id~~~~~---v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a 264 (441)
.+++.+.+. +.+.+..+ .++..++++|.||+|+|.+|+...++. .+
T Consensus 208 ~~i~~~~~~v~~v~~~~~~~-----~g~~~~i~~D~vv~a~G~~p~~~~~~~-----------------------~l--- 256 (320)
T 1trb_A 208 EEVTGDQMGVTGVRLRDTQN-----SDNIESLDVAGLFVAIGHSPNTAIFEG-----------------------QL--- 256 (320)
T ss_dssp EEEEECSSSEEEEEEECCTT-----CCCCEEEECSEEEECSCEEESCGGGTT-----------------------TS---
T ss_pred EEEEcCCCceEEEEEEeccC-----CCceEEEEcCEEEEEeCCCCChHHhcc-----------------------cc---
Confidence 888765522 55543211 012247899999999999887532210 00
Q ss_pred cCCCCceeEeeCceEEEEccCCcccCCceeeCCCc-----ccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHH
Q 013546 265 ENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWL-----RAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYL 339 (441)
Q Consensus 265 ~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~l-----qt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~a 339 (441)
++ + . |+|.||+++ +| ++|+|||+|||+.. .+..+..|+.||+.|
T Consensus 257 --------~~------------~-~-G~i~vd~~~~~~~~~t-~~~~vya~GD~~~~--------~~~~~~~A~~~g~~a 305 (320)
T 1trb_A 257 --------EL------------E-N-GYIKVQSGIHGNATQT-SIPGVFAAGDVMDH--------IYRQAITSAGTGCMA 305 (320)
T ss_dssp --------CE------------E-T-TEECCCCSSSSCTTBC-SSTTEEECGGGGCS--------SSCCHHHHHHHHHHH
T ss_pred --------cc------------c-C-ceEEECCCcccccccC-CCCCEEEcccccCC--------cchhhhhhhccHHHH
Confidence 00 0 0 889999997 67 99999999999932 257899999999999
Q ss_pred HHHHHHHhc
Q 013546 340 AELFNKKIG 348 (441)
Q Consensus 340 A~nI~~~l~ 348 (441)
|.||.++|.
T Consensus 306 a~~i~~~l~ 314 (320)
T 1trb_A 306 ALDAERYLD 314 (320)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999999996
No 168
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.28 E-value=9.5e-07 Score=88.38 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 358999999999999999999999999999998654
No 169
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.27 E-value=1.4e-06 Score=89.86 Aligned_cols=103 Identities=14% Similarity=0.107 Sum_probs=67.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+.+. .. +.++...+.+. +. ..++.++.+ .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~-----------~~-d~~~~~~l~~~---l~-~~gv~~~~~~~v 248 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR-----------GF-DQQMSSLVTEH---ME-SHGTQFLKGCVP 248 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-----------TS-CHHHHHHHHHH---HH-HTTCEEEETEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc-----------cC-CHHHHHHHHHH---HH-HCCCEEEeCCEE
Confidence 5689999999999999999999999999999864111 11 11222223222 22 346777665 67
Q ss_pred EEEeC-CCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC
Q 013546 188 IGIDT-DKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG 233 (441)
Q Consensus 188 ~~id~-~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ 233 (441)
.+++. +.+ .+.+.+..+ ++..++++|.||+|+|.+|+...
T Consensus 249 ~~i~~~~~~~~~v~~~~~~~------g~~~~~~~D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 249 SHIKKLPTNQLQVTWEDHAS------GKEDTGTFDTVLWAIGRVPETRT 291 (488)
T ss_dssp EEEEECTTSCEEEEEEETTT------TEEEEEEESEEEECSCEEESCGG
T ss_pred EEEEEcCCCcEEEEEEeCCC------CeeEEEECCEEEEcccCCcccCc
Confidence 77764 223 344443211 12235789999999999987653
No 170
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.26 E-value=8.9e-07 Score=86.74 Aligned_cols=35 Identities=9% Similarity=0.084 Sum_probs=32.3
Q ss_pred CcEEEECCCHHHHHHHHhhcc---CCCeEEEEcCCCCc
Q 013546 110 PRVVVLGTGWGACRFLKGIDT---KIYDAVCISPRNHM 144 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~---~g~~Vtvie~~~~~ 144 (441)
++|+|||||++|+++|..|++ .|++|+|||+++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 489999999999999999999 99999999998644
No 171
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.26 E-value=1.1e-06 Score=90.23 Aligned_cols=100 Identities=13% Similarity=0.201 Sum_probs=69.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccC-CCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-E
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK-IYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-S 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~-g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 186 (441)
+++|+|||+|+.|+++|..|++. |.+||++++.+++.-. . ....+...+.+. + +..++.++.+ .
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~---l-~~~GV~i~~~~~ 224 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG---------F-TSKSLSQMLRHD---L-EKNDVVVHTGEK 224 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT---------T-SCHHHHHHHHHH---H-HHTTCEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc---------c-cCHHHHHHHHHH---H-HhcCCEEEeCCE
Confidence 67999999999999999999998 9999999998865410 1 111222223222 2 2357777765 7
Q ss_pred EEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 187 CIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 187 v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
|.+++.+++.+.+...++ .++++|.||+|+|..|+.
T Consensus 225 v~~i~~~~~~v~v~~~~g---------~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 225 VVRLEGENGKVARVITDK---------RTLDADLVILAAGVSPNT 260 (472)
T ss_dssp EEEEEESSSBEEEEEESS---------CEEECSEEEECSCEEECC
T ss_pred EEEEEccCCeEEEEEeCC---------CEEEcCEEEECCCCCcCH
Confidence 888877555444333211 378999999999998875
No 172
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.25 E-value=1.7e-06 Score=88.35 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=66.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
.++|+|||+|+.|+++|..|++.|.+||++++.+++.- ...+.++...+.+. +.+ . +.++.+ .+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~~~~~~~~~~l~~~---l~~-~-v~i~~~~~v 212 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR----------RSFDKEVTDILEEK---LKK-H-VNLRLQEIT 212 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT----------TTSCHHHHHHHHHH---HTT-T-SEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch----------hhcCHHHHHHHHHH---HHh-C-cEEEeCCeE
Confidence 67999999999999999999999999999999886541 10111222223332 333 3 666554 67
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++.+.+...+... ..++++|.||+|+|.+|+.
T Consensus 213 ~~i~~~~~v~~v~~~----------g~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 213 MKIEGEERVEKVVTD----------AGEYKAELVILATGIKPNI 246 (449)
T ss_dssp EEEECSSSCCEEEET----------TEEEECSEEEECSCEEECC
T ss_pred EEEeccCcEEEEEeC----------CCEEECCEEEEeeCCccCH
Confidence 788765432112211 1378999999999998875
No 173
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.24 E-value=1.7e-06 Score=86.96 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=68.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
.++|+|||+|+.|+++|..|.+.|.+||++++.+++.-. . ....+...+.+. + +..+++++.+ .|
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~---------~-~~~~~~~~l~~~---l-~~~GV~i~~~~~v 207 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR---------V-VTPEISSYFHDR---H-SGAGIRMHYGVRA 207 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT---------T-SCHHHHHHHHHH---H-HHTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh---------c-cCHHHHHHHHHH---H-HhCCcEEEECCEE
Confidence 679999999999999999999999999999998865411 0 111122222222 2 2357777765 78
Q ss_pred EEEeCCCCEEE-EEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKHEVY-CETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~~v~-~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++.+++.+. +...+ + .++++|.||+|+|..|+.
T Consensus 208 ~~i~~~~~~v~~V~~~d-G--------~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 208 TEIAAEGDRVTGVVLSD-G--------NTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EEEEEETTEEEEEEETT-S--------CEEECSEEEECCCEEECC
T ss_pred EEEEecCCcEEEEEeCC-C--------CEEEcCEEEECcCCccCH
Confidence 88876544432 32211 1 378999999999998876
No 174
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.23 E-value=2.3e-06 Score=87.26 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|.+|+|+|+.+..
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~ 61 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKL 61 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 468999999999999999999999999999998754
No 175
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.22 E-value=1.7e-06 Score=88.00 Aligned_cols=100 Identities=13% Similarity=0.171 Sum_probs=66.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+||++++.+.+.-. ..+ ..+...+.+. +. ..++.++.+ .+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~---------~~~-~~~~~~l~~~---l~-~~GV~i~~~~~v 214 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER---------VTA-PPVSAFYEHL---HR-EAGVDIRTGTQV 214 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT---------TSC-HHHHHHHHHH---HH-HHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc---------hhh-HHHHHHHHHH---HH-hCCeEEEeCCEE
Confidence 679999999999999999999999999999998765310 011 1121222222 22 246777665 68
Q ss_pred EEEeC--CCCEE-EEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDT--DKHEV-YCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~--~~~~v-~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++. +++.+ .+...+ + .++++|.||+|+|.+|+.
T Consensus 215 ~~i~~~~~~~~v~~v~~~~-G--------~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 215 CGFEMSTDQQKVTAVLCED-G--------TRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp EEEEECTTTCCEEEEEETT-S--------CEEECSEEEECCCEEECC
T ss_pred EEEEeccCCCcEEEEEeCC-C--------CEEEcCEEEECCCCCcCc
Confidence 88875 33322 232211 1 378999999999998875
No 176
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.21 E-value=8.2e-07 Score=89.30 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+|+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3589999999999999999999999999999986
No 177
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.20 E-value=3.7e-06 Score=82.80 Aligned_cols=100 Identities=19% Similarity=0.204 Sum_probs=68.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|++.|.+|+++++.+.+... . .....+.+. . +..++.++.+ .+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~------------~-~~~~~l~~~---~-~~~gv~i~~~~~v 225 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH------------G-KTAHEVERA---R-ANGTIDVYLETEV 225 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC------------S-HHHHSSHHH---H-HHTSEEEESSEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC------------H-HHHHHHHHH---h-hcCceEEEcCcCH
Confidence 679999999999999999999999999999998754311 0 111122222 1 2246777765 78
Q ss_pred EEEeCCCC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+++.+.+ .+.+...+ +++.++++|.||+|+|..|+..
T Consensus 226 ~~i~~~~~~v~~v~~~~~~-------g~~~~i~~D~vi~a~G~~p~~~ 266 (360)
T 3ab1_A 226 ASIEESNGVLTRVHLRSSD-------GSKWTVEADRLLILIGFKSNLG 266 (360)
T ss_dssp EEEEEETTEEEEEEEEETT-------CCEEEEECSEEEECCCBCCSCG
T ss_pred HHhccCCCceEEEEEEecC-------CCeEEEeCCEEEECCCCCCCHH
Confidence 88876544 34444111 2234789999999999988754
No 178
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.20 E-value=1.7e-06 Score=90.11 Aligned_cols=185 Identities=19% Similarity=0.184 Sum_probs=121.8
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EEE
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SCI 188 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~ 188 (441)
++|+|||||+.|+++|..|++.|.+||++++.+++. + .. +.++...+.+. +. ..++.++.+ .|.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l--~--------~~-~~~~~~~l~~~---l~-~~GV~i~~~~~V~ 279 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK--L--------IK-DNETRAYVLDR---MK-EQGMEIISGSNVT 279 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--T--------CC-SHHHHHHHHHH---HH-HTTCEEESSCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc--c--------cc-cHHHHHHHHHH---HH-hCCcEEEECCEEE
Confidence 799999999999999999999999999999988654 1 11 11122223222 22 347777755 788
Q ss_pred EEeCCCCE----EEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccc
Q 013546 189 GIDTDKHE----VYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLS 264 (441)
Q Consensus 189 ~id~~~~~----v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a 264 (441)
+++.+.+. +.+...+ + +.++++|.||+|+|.+|+... .. +.. .+
T Consensus 280 ~i~~~~~~~v~~~~v~~~~-------G-~~~i~aD~Vv~A~G~~p~~~~--~l-----------------~~~--gl--- 327 (523)
T 1mo9_A 280 RIEEDANGRVQAVVAMTPN-------G-EMRIETDFVFLGLGEQPRSAE--LA-----------------KIL--GL--- 327 (523)
T ss_dssp EEEECTTSBEEEEEEEETT-------E-EEEEECSCEEECCCCEECCHH--HH-----------------HHH--TC---
T ss_pred EEEEcCCCceEEEEEEECC-------C-cEEEEcCEEEECcCCccCCcc--CH-----------------HHc--CC---
Confidence 88763222 3333311 1 126899999999999987531 11 000 11
Q ss_pred cCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 265 ENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 265 ~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
++ +.. |+|.||++||| +.|+|||+|||+. .|+++..|++||+.+|.||.
T Consensus 328 --------~~------------~~~-G~i~Vd~~~~t-~~~~IyA~GD~~~---------~~~~~~~A~~~g~~aa~~i~ 376 (523)
T 1mo9_A 328 --------DL------------GPK-GEVLVNEYLQT-SVPNVYAVGDLIG---------GPMEMFKARKSGCYAARNVM 376 (523)
T ss_dssp --------CB------------CTT-SCBCCCTTSBC-SSTTEEECGGGGC---------SSCSHHHHHHHHHHHHHHHT
T ss_pred --------cc------------CCC-CCEEECCCCcc-CCCCEEEEeecCC---------CcccHHHHHHHHHHHHHHHc
Confidence 11 111 78999999999 9999999999992 35789999999999999997
Q ss_pred HHhccccCCCcccccCCCCCCCceeecceeEEEecCCc
Q 013546 345 KKIGEQDGGKALSAKDINLGDPFVYKHLGSMATVGRYK 382 (441)
Q Consensus 345 ~~l~~~~~g~~~~~~~~~~~~~f~~~~~g~~~~lG~~~ 382 (441)
. +... -++. ..|+.......+.++|...
T Consensus 377 g--------~~~~-~~~~-~~p~~~~~~~~~a~vG~~e 404 (523)
T 1mo9_A 377 G--------EKIS-YTPK-NYPDFLHTHYEVSFLGMGE 404 (523)
T ss_dssp T--------CCCC-CCCC-SCCEEEESSSEEEEEECCH
T ss_pred C--------CCCC-CCCC-CCCeEEECCCceEEEeCCH
Confidence 2 2100 0012 1455444445677887654
No 179
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.17 E-value=6.8e-06 Score=83.69 Aligned_cols=140 Identities=11% Similarity=0.069 Sum_probs=98.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCe-EEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYD-AVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLASC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~-Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 187 (441)
+++|+|||+|+.|+++|..|++.+.+ |+++++.+.+. +..++. ....+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~l------------------------------~~~~i~-~~~~v 260 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGDI------------------------------QNESLQ-QVPEI 260 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCSC------------------------------BCSSEE-EECCE
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCcC------------------------------CCCCeE-EecCe
Confidence 68999999999999999999999999 99999876430 012333 23456
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCC-----CCCcccccccccCHhHHHHHHHHHHHhcc
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFG-----IKGVKENAYFLREVNHAQEIRKKLLLNLM 262 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~-----ipG~~~~~~~l~~~~~a~~~~~~i~~~~~ 262 (441)
.+++.+...|.+.++ +..+++|.||+|||.+|+++- ++.... .+.
T Consensus 261 ~~~~~~~~~v~~~dG----------~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~--------------------~i~ 310 (447)
T 2gv8_A 261 TKFDPTTREIYLKGG----------KVLSNIDRVIYCTGYLYSVPFPSLAKLKSPET--------------------KLI 310 (447)
T ss_dssp EEEETTTTEEEETTT----------EEECCCSEEEECCCBCCCCCCHHHHSCCSTTT--------------------CCC
T ss_pred EEEecCCCEEEECCC----------CEeccCCEEEECCCCCcCCCCCcccccccccC--------------------cee
Confidence 667655566766542 123789999999999998764 332100 000
Q ss_pred cccCCCCceeEeeCceEEEEccCCcccCCceeeCCCccc--CCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHH
Q 013546 263 LSENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRA--PSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLA 340 (441)
Q Consensus 263 ~a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt--~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA 340 (441)
. + +.+.++.+.++ ++.|++||+||+.. ..++..|..||+.+|
T Consensus 311 ~-------------------------~-~~~~~~~~~~v~~~~~p~l~~~G~~~~----------~~~~~~a~~qa~~~a 354 (447)
T 2gv8_A 311 D-------------------------D-GSHVHNVYQHIFYIPDPTLAFVGLALH----------VVPFPTSQAQAAFLA 354 (447)
T ss_dssp S-------------------------S-SSSCCSEETTTEETTCTTEEESSCCBS----------SCHHHHHHHHHHHHH
T ss_pred c-------------------------C-CCcccccccccccCCCCcEEEEecccc----------ccCchHHHHHHHHHH
Confidence 0 0 44556655552 38999999999982 237899999999999
Q ss_pred HHHHH
Q 013546 341 ELFNK 345 (441)
Q Consensus 341 ~nI~~ 345 (441)
++|..
T Consensus 355 ~~~~g 359 (447)
T 2gv8_A 355 RVWSG 359 (447)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 99973
No 180
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.17 E-value=2.3e-06 Score=87.42 Aligned_cols=36 Identities=14% Similarity=0.229 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~ 144 (441)
+++|+|||||..|+++|..|.+. +.+|+++++.+.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 67999999999999999999987 8999999998865
No 181
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.16 E-value=2e-06 Score=90.89 Aligned_cols=37 Identities=11% Similarity=0.039 Sum_probs=33.7
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
|+..+|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 4467999999999999999999999999999999853
No 182
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.15 E-value=8.5e-07 Score=87.93 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4689999999999999999999999999999975
No 183
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.15 E-value=6.3e-06 Score=79.59 Aligned_cols=158 Identities=21% Similarity=0.133 Sum_probs=112.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE-EEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL-ASC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 187 (441)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+... . .+.+. +. ..++.++. ..+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~-------------~----~l~~~---l~-~~gv~i~~~~~v 213 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCE-------------N----AYVQE---IK-KRNIPYIMNAQV 213 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSC-------------H----HHHHH---HH-HTTCCEECSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCC-------------H----HHHHH---Hh-cCCcEEEcCCeE
Confidence 579999999999999999999999999999988754310 0 11111 12 23566554 477
Q ss_pred EEEeCCCC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccc
Q 013546 188 IGIDTDKH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLS 264 (441)
Q Consensus 188 ~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a 264 (441)
.+++.+.+ .+.+.+..+ ++..++++|.||+|+|..|+...+...
T Consensus 214 ~~i~~~~~~v~~v~~~~~~~------g~~~~i~~D~vi~a~G~~p~~~~l~~~--------------------------- 260 (319)
T 3cty_A 214 TEIVGDGKKVTGVKYKDRTT------GEEKLIETDGVFIYVGLIPQTSFLKDS--------------------------- 260 (319)
T ss_dssp EEEEESSSSEEEEEEEETTT------CCEEEECCSEEEECCCEEECCGGGTTS---------------------------
T ss_pred EEEecCCceEEEEEEEEcCC------CceEEEecCEEEEeeCCccChHHHhhc---------------------------
Confidence 88876543 355543111 223468999999999998875322110
Q ss_pred cCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 265 ENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 265 ~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
| +++ +.. |+|.||+++|| +.|+|||+|||+.. .++++..|+.||+.+|.||.
T Consensus 261 ---g---l~~------------~~~-g~i~vd~~~~t-~~~~vya~GD~~~~--------~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 261 ---G---VKL------------DER-GYIVVDSRQRT-SVPGVYAAGDVTSG--------NFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp ---C---CCB------------CTT-SCBCCCTTCBC-SSTTEEECSTTBTT--------CCCCHHHHHHHHHHHHHHHH
T ss_pred ---c---ccc------------cCC-ccEeCCCCCcc-CCCCEEEeecccCc--------chhhHHHHHHHHHHHHHHHH
Confidence 0 011 111 78999999999 99999999999932 25789999999999999999
Q ss_pred HHhc
Q 013546 345 KKIG 348 (441)
Q Consensus 345 ~~l~ 348 (441)
+.|.
T Consensus 313 ~~l~ 316 (319)
T 3cty_A 313 SDSI 316 (319)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9985
No 184
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.14 E-value=2.3e-06 Score=81.27 Aligned_cols=89 Identities=8% Similarity=-0.089 Sum_probs=64.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLASCI 188 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 188 (441)
+++|+|||+|+.|+++|..|.+.| +|+++++.+... ...+.+. +. ..++.++...+.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~~------------------~~~~~~~---l~-~~gv~i~~~~v~ 197 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVEP------------------DADQHAL---LA-ARGVRVETTRIR 197 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCCC------------------CHHHHHH---HH-HTTCEEECSCEE
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCCC------------------CHHHHHH---HH-HCCcEEEcceee
Confidence 679999999999999999999999 999998876310 1112222 22 246777767888
Q ss_pred EEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 189 GIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 189 ~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
+++.+. .+.+.++ .++++|.||+|+|..|+.+
T Consensus 198 ~i~~~~-~v~~~~g-----------~~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 198 EIAGHA-DVVLADG-----------RSIALAGLFTQPKLRITVD 229 (297)
T ss_dssp EEETTE-EEEETTS-----------CEEEESEEEECCEEECCCS
T ss_pred eeecCC-eEEeCCC-----------CEEEEEEEEEccCcccCch
Confidence 887654 5554432 3789999999999988754
No 185
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.13 E-value=1.1e-05 Score=77.47 Aligned_cols=97 Identities=22% Similarity=0.186 Sum_probs=69.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||+|+.|+++|..|.+.|.+|+++++.+.+.. .. ..+++ +.+..++.++.+ .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~-------------~~---~~~~~----~~~~~gv~~~~~~~v 213 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA-------------QP---IYVET----VKKKPNVEFVLNSVV 213 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------------CH---HHHHH----HHTCTTEEEECSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------------CH---HHHHH----HHhCCCcEEEeCCEE
Confidence 57999999999999999999999999999999875541 00 01122 334457888765 58
Q ss_pred EEEeCCCCE--EEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCC
Q 013546 188 IGIDTDKHE--VYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 188 ~~id~~~~~--v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~ 231 (441)
.+++.+.+. +.+.+..+ +++.++++|.||+|+|..|+.
T Consensus 214 ~~i~~~~~~~~v~~~~~~~------g~~~~~~~D~vv~a~G~~p~~ 253 (323)
T 3f8d_A 214 KEIKGDKVVKQVVVENLKT------GEIKELNVNGVFIEIGFDPPT 253 (323)
T ss_dssp EEEEESSSEEEEEEEETTT------CCEEEEECSEEEECCCEECCH
T ss_pred EEEeccCceeEEEEEECCC------CceEEEEcCEEEEEECCCCCh
Confidence 888766543 55554211 223478999999999998874
No 186
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.13 E-value=3.3e-05 Score=80.81 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=34.3
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.+++|+|||+|+.|+++|..|++.+.+||||++.+..
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 4789999999999999999999999999999999864
No 187
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.12 E-value=3.5e-06 Score=87.10 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=67.4
Q ss_pred CCcEEEECCCHHHHHHHHhhcc----CCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT----KIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL 184 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~----~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 184 (441)
+++|+|||||+.|+++|..|++ .|.+|+++++.+...- . .+. ..+...+.+. + +..++.++.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~-~--------~l~-~~~~~~~~~~---l-~~~GV~v~~ 245 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG-K--------ILP-EYLSNWTMEK---V-RREGVKVMP 245 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT-T--------TSC-HHHHHHHHHH---H-HTTTCEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc-c--------cCC-HHHHHHHHHH---H-HhcCCEEEe
Confidence 6799999999999999999876 4789999998764321 0 011 1111122222 2 235788776
Q ss_pred E-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 185 A-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 185 ~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
+ .|.+++.+.+.+.+...++ .++++|.||+|+|..|+..
T Consensus 246 ~~~V~~i~~~~~~~~v~l~dG---------~~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 246 NAIVQSVGVSSGKLLIKLKDG---------RKVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp SCCEEEEEEETTEEEEEETTS---------CEEEESEEEECCCEEECCT
T ss_pred CCEEEEEEecCCeEEEEECCC---------CEEECCEEEECCCCCccHH
Confidence 5 6888875555444443211 3789999999999998764
No 188
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.09 E-value=1.4e-06 Score=89.80 Aligned_cols=37 Identities=14% Similarity=0.240 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
+|+|||||||++||+||..|++.|++|+|+|++++++
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPG 37 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC----
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCC
Confidence 5789999999999999999999999999999998764
No 189
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.08 E-value=5e-06 Score=87.57 Aligned_cols=36 Identities=17% Similarity=0.082 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 468999999999999999999999999999997653
No 190
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.08 E-value=4.7e-06 Score=89.56 Aligned_cols=36 Identities=8% Similarity=0.139 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|++|+|+|+.+..
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 479999999999999999999999999999996543
No 191
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.07 E-value=7.4e-06 Score=78.45 Aligned_cols=161 Identities=19% Similarity=0.080 Sum_probs=115.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE-EEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL-ASC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 187 (441)
+++|+|||+|+.|+++|..|.+.|.+|+++++.+.+... . ....+ +.+..++.++. ..+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~------------~----~~~~~----~~~~~gv~~~~~~~v 206 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAA------------P----STVEK----VKKNEKIELITSASV 206 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSC------------H----HHHHH----HHHCTTEEEECSCEE
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCC------------H----HHHHH----HHhcCCeEEEeCcEE
Confidence 579999999999999999999999999999998754210 0 01122 22345788774 478
Q ss_pred EEEeCCCCE---EEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccc
Q 013546 188 IGIDTDKHE---VYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLS 264 (441)
Q Consensus 188 ~~id~~~~~---v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a 264 (441)
.+++.+.+. +.+... .+++.++++|.||+|+|..|+...++..+
T Consensus 207 ~~i~~~~~~~~~v~~~~~-------~g~~~~~~~D~vv~a~G~~p~~~~~~~~~-------------------------- 253 (315)
T 3r9u_A 207 DEVYGDKMGVAGVKVKLK-------DGSIRDLNVPGIFTFVGLNVRNEILKQDD-------------------------- 253 (315)
T ss_dssp EEEEEETTEEEEEEEECT-------TSCEEEECCSCEEECSCEEECCGGGBCTT--------------------------
T ss_pred EEEEcCCCcEEEEEEEcC-------CCCeEEeecCeEEEEEcCCCCchhhhccc--------------------------
Confidence 888765532 444411 12334789999999999988754222100
Q ss_pred cCCCCce-eEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHH
Q 013546 265 ENPGDTV-QLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELF 343 (441)
Q Consensus 265 ~~~G~~~-vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI 343 (441)
..+ +++ +.. |+|.||+++|| +.|+|||+|||+. ..|+++..|+.||+.+|.||
T Consensus 254 ----~~g~l~~------------~~~-g~i~vd~~~~t-~~~~v~a~GD~~~--------~~~~~~~~A~~~g~~aa~~i 307 (315)
T 3r9u_A 254 ----SKFLCNM------------EEG-GQVSVDLKMQT-SVAGLFAAGDLRK--------DAPKQVICAAGDGAVAALSA 307 (315)
T ss_dssp ----SCBSSCB------------CTT-SCBCCCTTCBC-SSTTEEECGGGBT--------TCCCCHHHHHHHHHHHHHHH
T ss_pred ----ccceeee------------cCC-CcEEeCCCccc-CCCCEEEeecccC--------CchhhhhhHHhhHHHHHHHH
Confidence 000 111 111 78999999999 9999999999983 24789999999999999999
Q ss_pred HHHhc
Q 013546 344 NKKIG 348 (441)
Q Consensus 344 ~~~l~ 348 (441)
.++|.
T Consensus 308 ~~~l~ 312 (315)
T 3r9u_A 308 MAYIE 312 (315)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 192
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.07 E-value=2.1e-06 Score=87.74 Aligned_cols=35 Identities=11% Similarity=0.261 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 35899999999999999999999999999999875
No 193
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.07 E-value=3.5e-06 Score=83.49 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4689999999999999999999999999999974
No 194
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.05 E-value=1e-05 Score=79.61 Aligned_cols=170 Identities=12% Similarity=0.069 Sum_probs=102.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCcc-ccccch-hhhhhhhcCCCC-EEEEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFR-SVAEPV-SRIQTSLSSDPN-SYFYLA 185 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~-~~~~~~-~~~~~~~~~~~~-v~~~~~ 185 (441)
.++|+|||+|+.|+++|..|++.|.+||++++.+.+.- +. .+.. .....+ +.+.+.+. ..+ +.++.+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~-~~--------~d~~~~~~~~~~~~l~~~l~-~~g~v~~~~~ 235 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND-PD--------ADPSVRLSPYTRQRLGNVIK-QGARIEMNVH 235 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-------------------CTTSCCHHHHHHHHHHHH-TTCCEEEECS
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC-CC--------CCCCccCCHHHHHHHHHHHh-hCCcEEEecC
Confidence 56999999999999999999999999999999875431 00 0000 000111 11212133 344 777654
Q ss_pred -EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccc
Q 013546 186 -SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLS 264 (441)
Q Consensus 186 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a 264 (441)
.+.+++.+.+.+.+...+ + +....+|.+|+|+|.+|+...+. +. .+..
T Consensus 236 ~~v~~i~~~~~~~~v~~~~-------g-~~~~~~d~vi~a~G~~~~~~~~~-------------------~~---~~~~- 284 (369)
T 3d1c_A 236 YTVKDIDFNNGQYHISFDS-------G-QSVHTPHEPILATGFDATKNPIV-------------------QQ---LFVT- 284 (369)
T ss_dssp CCEEEEEEETTEEEEEESS-------S-CCEEESSCCEECCCBCGGGSHHH-------------------HH---HSCC-
T ss_pred cEEEEEEecCCceEEEecC-------C-eEeccCCceEEeeccCCccchhh-------------------hh---hccC-
Confidence 677775434443333211 1 11334699999999988753110 00 0110
Q ss_pred cCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 265 ENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 265 ~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
.. |+|.||++++.+++|+|||+|||+..++. ....+..|.+||+.+|+||.
T Consensus 285 -----------------------~~-g~i~v~~~~~~t~~~~v~a~GD~~~~~~~-----~~~~~~~~~~~a~~~a~~l~ 335 (369)
T 3d1c_A 285 -----------------------TN-QDIKLTTHDESTRYPNIFMIGATVENDNA-----KLCYIYKFRARFAVLAHLLT 335 (369)
T ss_dssp -----------------------TT-SCCCBCTTSBBSSSTTEEECSTTCCCSSC-----CCCSHHHHGGGHHHHHHHHH
T ss_pred -----------------------CC-CCEEechhhcccCCCCeEEeccccccCCe-----eEEEEehhhHHHHHHHHHHh
Confidence 00 77999986443399999999999965421 12245578899999999999
Q ss_pred HHhc
Q 013546 345 KKIG 348 (441)
Q Consensus 345 ~~l~ 348 (441)
..+.
T Consensus 336 ~~~~ 339 (369)
T 3d1c_A 336 QREG 339 (369)
T ss_dssp HHTT
T ss_pred cccC
Confidence 7764
No 195
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.04 E-value=3.8e-06 Score=83.74 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.+|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 5899999999999999999999999999999874
No 196
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.03 E-value=4.8e-06 Score=86.85 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 458999999999999999999999999999998643
No 197
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.03 E-value=1.4e-05 Score=83.30 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=68.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++.+.+.. + ..+.+. +.+..++.++.+ .+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~------------~-----~~l~~~---l~~~~gV~v~~~~~v 414 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------D-----QVLQDK---VRSLKNVDIILNAQT 414 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS------------C-----HHHHHH---HTTCTTEEEECSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc------------C-----HHHHHH---HhcCCCcEEEeCCEE
Confidence 67999999999999999999999999999998875431 0 112221 333357777655 67
Q ss_pred EEEeCCCC---EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKH---EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~---~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
++++.+.+ .+.+.+..+ +++.++++|.|++|+|..|+..
T Consensus 415 ~~i~~~~~~v~~v~~~~~~~------g~~~~i~~D~vi~a~G~~pn~~ 456 (521)
T 1hyu_A 415 TEVKGDGSKVVGLEYRDRVS------GDIHSVALAGIFVQIGLLPNTH 456 (521)
T ss_dssp EEEEECSSSEEEEEEEETTT------CCEEEEECSEEEECCCEEESCG
T ss_pred EEEEcCCCcEEEEEEEeCCC------CceEEEEcCEEEECcCCCCCch
Confidence 78875433 345554211 2334789999999999988764
No 198
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.02 E-value=9.2e-06 Score=83.30 Aligned_cols=139 Identities=11% Similarity=0.001 Sum_probs=95.8
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEEE
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLASC 187 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 187 (441)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.-. .. ..++.+. ..+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~---------~~------------------~~~V~~~-~~V 247 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY---------KW------------------PENWDER-PNL 247 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC---------CC------------------CTTEEEC-SCE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC---------CC------------------CCceEEc-CCe
Confidence 3689999999999999999999999999999988754300 00 0133333 455
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENP 267 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~ 267 (441)
.+++ .+.|.+.++ .++++|.||+|||.+|+++.++.. . . +
T Consensus 248 ~~i~--~~~V~~~dG-----------~~i~~D~Vi~atG~~p~~~~l~~~--~--g-----------------l------ 287 (464)
T 2xve_A 248 VRVD--TENAYFADG-----------SSEKVDAIILCTGYIHHFPFLNDD--L--R-----------------L------ 287 (464)
T ss_dssp EEEC--SSEEEETTS-----------CEEECSEEEECCCBCCCCTTBCTT--T--C-----------------C------
T ss_pred EEEe--CCEEEECCC-----------CEEeCCEEEECCCCCCCCCCcCcc--c--c-----------------c------
Confidence 5664 345665442 268999999999999987644421 0 0 0
Q ss_pred CCceeEeeCceEEEEccCCcccCCceeeCC---CcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 013546 268 GDTVQLFSKYFVITITLSFLVRLSQIGVDE---WLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFN 344 (441)
Q Consensus 268 G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~---~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~ 344 (441)
++.+ . |++ ++. .++| +.|+|||+|||+. ..+...|..||+.+|++|.
T Consensus 288 -----~~~~------------~-~~v-~~~~~~~~~t-~~p~i~aiGd~~~----------~~~~~~a~~qa~~~a~~l~ 337 (464)
T 2xve_A 288 -----VTNN------------R-LWP-LNLYKGVVWE-DNPKFFYIGMQDQ----------WYSFNMFDAQAWYARDVIM 337 (464)
T ss_dssp -----CCCS------------S-SCC-SSEETTTEES-SSTTEEECSCSCC----------SSCHHHHHHHHHHHHHHHT
T ss_pred -----ccCC------------C-ccc-ccccceEecC-CCCCEEEEeCccc----------ccchHHHHHHHHHHHHHHc
Confidence 0000 0 233 333 3567 8999999999882 2478899999999999997
No 199
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.02 E-value=2e-05 Score=75.87 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=34.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
+++|+|||||+.|+++|..|++.|.+|||+++.+++.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 5799999999999999999999999999999988654
No 200
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.01 E-value=7.5e-06 Score=84.98 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 3589999999999999999999999999999987
No 201
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.99 E-value=3.6e-05 Score=79.72 Aligned_cols=41 Identities=7% Similarity=0.139 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHhhccC--------------CCeEEEEcCCCCccccc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTK--------------IYDAVCISPRNHMVFTP 148 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~--------------g~~Vtvie~~~~~~~~~ 148 (441)
...+|+|||+||+||++|..|.+. +..++.+|+.+.+.|.+
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~ 92 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHS 92 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSG
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCC
Confidence 346899999999999999888542 34678899998776543
No 202
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.99 E-value=1.4e-05 Score=82.87 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 568999999999999999999999999999998654
No 203
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.98 E-value=2.4e-05 Score=75.40 Aligned_cols=97 Identities=16% Similarity=0.156 Sum_probs=69.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEE-EEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYL-ASC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 187 (441)
+++|+|||+|+.|+++|..|++.+.+|+++++.+.+. + .+ ..+++ +. ..++.++. ..+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~--~---------~~-----~~~~~----l~-~~gv~~~~~~~v 212 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR--A---------HE-----HSVEN----LH-ASKVNVLTPFVP 212 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS--S---------CH-----HHHHH----HH-HSSCEEETTEEE
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC--c---------cH-----HHHHH----Hh-cCCeEEEeCcee
Confidence 6799999999999999999999999999999987543 0 00 01122 11 24677765 478
Q ss_pred EEEeCCCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.+++.+.+ .+.+.+... ++..++++|.||+|+|..|+.+
T Consensus 213 ~~i~~~~~~~~v~~~~~~~------g~~~~~~~D~vv~a~G~~p~~~ 253 (332)
T 3lzw_A 213 AELIGEDKIEQLVLEEVKG------DRKEILEIDDLIVNYGFVSSLG 253 (332)
T ss_dssp EEEECSSSCCEEEEEETTS------CCEEEEECSEEEECCCEECCCG
T ss_pred eEEecCCceEEEEEEecCC------CceEEEECCEEEEeeccCCCch
Confidence 88876554 455655322 2235789999999999988764
No 204
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.97 E-value=1.5e-05 Score=84.38 Aligned_cols=163 Identities=17% Similarity=0.236 Sum_probs=105.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+||++++. .+. + ..+ .++...+.+. +. ..++.++.+ .+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l--~--------~~d-~~~~~~~~~~---l~-~~gv~i~~~~~v 349 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILL--R--------GFD-QQMAEKVGDY---ME-NHGVKFAKLCVP 349 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS--T--------TSC-HHHHHHHHHH---HH-HTTCEEEETEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCc--C--------cCC-HHHHHHHHHH---HH-hCCCEEEECCeE
Confidence 568999999999999999999999999999987 221 1 011 1122222222 22 246777654 44
Q ss_pred EEEeC------C---CCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHH
Q 013546 188 IGIDT------D---KHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLL 258 (441)
Q Consensus 188 ~~id~------~---~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~ 258 (441)
..+.. + .+.+.+.....+ +++.++++|.||+|+|.+|+...+. .+
T Consensus 350 ~~v~~~~~~~~~~~~~~~~~v~~~~~~-----g~~~~~~~D~vi~a~G~~p~~~~l~-~~-------------------- 403 (598)
T 2x8g_A 350 DEIKQLKVVDTENNKPGLLLVKGHYTD-----GKKFEEEFETVIFAVGREPQLSKVL-CE-------------------- 403 (598)
T ss_dssp EEEEEEECCBTTTTBCCEEEEEEEETT-----SCEEEEEESEEEECSCEEECGGGTB-CG--------------------
T ss_pred EEEEeccccccccCCCceEEEEEEeCC-----CcEEeccCCEEEEEeCCccccCccC-ch--------------------
Confidence 45531 1 134433321111 2223456999999999998764221 00
Q ss_pred HhcccccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHH
Q 013546 259 LNLMLSENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKY 338 (441)
Q Consensus 259 ~~~~~a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~ 338 (441)
.. ++++ +.. |+|.||+++|| +.|+|||+|||+. | .+.++..|++||+.
T Consensus 404 ----~~------gl~~------------~~~-G~i~vd~~~~t-s~~~VyA~GD~~~-----~---~~~~~~~A~~~g~~ 451 (598)
T 2x8g_A 404 ----TV------GVKL------------DKN-GRVVCTDDEQT-TVSNVYAIGDINA-----G---KPQLTPVAIQAGRY 451 (598)
T ss_dssp ----GG------CCCB------------CTT-SCBCCCTTSBC-SSTTEEECGGGBT-----T---SCCCHHHHHHHHHH
T ss_pred ----hc------CceE------------CCC-CcEEeCCCCcC-CCCCEEEEeeecC-----C---CCccHHHHHHhHHH
Confidence 00 0111 111 78999999999 9999999999972 2 36789999999999
Q ss_pred HHHHHHH
Q 013546 339 LAELFNK 345 (441)
Q Consensus 339 aA~nI~~ 345 (441)
+|.||..
T Consensus 452 aa~~i~~ 458 (598)
T 2x8g_A 452 LARRLFA 458 (598)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999974
No 205
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.96 E-value=1.5e-06 Score=87.01 Aligned_cols=88 Identities=14% Similarity=0.017 Sum_probs=60.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
+++|+|||||+.|+++|..|++.|.+|||+++.+++.-. ..+ ..+...+.+. + +..++.++.+ .+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~---------~~~-~~~~~~~~~~---l-~~~gV~~~~~~~v 211 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER---------QLD-RDGGLFLKDK---L-DRLGIKIYTNSNF 211 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT---------TSC-HHHHHHHHHH---H-HTTTCEEECSCCG
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh---------hcC-HHHHHHHHHH---H-HhCCCEEEeCCEE
Confidence 578999999999999999999999999999999865411 011 1122222222 2 2356766543 22
Q ss_pred EEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCC
Q 013546 188 IGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTF 232 (441)
Q Consensus 188 ~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~ 232 (441)
.++ + .++++|.||+|+|.+|+..
T Consensus 212 ~~i-----------g-----------~~~~~D~vv~a~G~~p~~~ 234 (385)
T 3klj_A 212 EEM-----------G-----------DLIRSSCVITAVGVKPNLD 234 (385)
T ss_dssp GGC-----------H-----------HHHHHSEEEECCCEEECCG
T ss_pred EEc-----------C-----------eEEecCeEEECcCcccChh
Confidence 222 1 3689999999999998764
No 206
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.96 E-value=5.8e-06 Score=82.43 Aligned_cols=34 Identities=6% Similarity=-0.035 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHhhcc-CC-CeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT-KI-YDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~-~g-~~Vtvie~~~ 142 (441)
..+|+|||||++|+++|..|++ .| ++|+|||+.+
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 4689999999999999999999 89 9999999976
No 207
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.95 E-value=1.1e-05 Score=84.82 Aligned_cols=36 Identities=17% Similarity=0.131 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||+||+++|..|++.|++|+|+|+.+..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVI 161 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 468999999999999999999999999999998755
No 208
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.94 E-value=1.8e-05 Score=81.87 Aligned_cols=36 Identities=14% Similarity=0.168 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR 47 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 568999999999999999999999999999998654
No 209
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.92 E-value=3.4e-05 Score=75.70 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~~ 145 (441)
..+|+|||||++|+++|..|++. |++|+|||+.+...
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 45899999999999999999986 99999999987553
No 210
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.92 E-value=8.5e-06 Score=84.45 Aligned_cols=101 Identities=11% Similarity=0.155 Sum_probs=64.2
Q ss_pred CcEEEECCCHHHHHHHHhhccC--------------CCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK--------------IYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLS 175 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~--------------g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~ 175 (441)
.+++||||||+|+++|..|+.. +.+|+|+|..+++. +. . ++.+...+.+. +.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il--~~--------~-~~~~~~~~~~~---L~ 283 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL--NM--------F-EKKLSSYAQSH---LE 283 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS--TT--------S-CHHHHHHHHHH---HH
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc--cC--------C-CHHHHHHHHHH---HH
Confidence 4799999999999999887642 36899999998765 11 1 11222223332 22
Q ss_pred CCCCEEEEEE-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcC
Q 013546 176 SDPNSYFYLA-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPL 230 (441)
Q Consensus 176 ~~~~v~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~ 230 (441)
..+|+++.+ .|.+++.+ .+.+.....++ +..+.++++|.||.|+|.+|+
T Consensus 284 -~~GV~v~~~~~v~~v~~~--~~~~~~~~~dg---~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 284 -NTSIKVHLRTAVAKVEEK--QLLAKTKHEDG---KITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp -HTTCEEETTEEEEEECSS--EEEEEEECTTS---CEEEEEEECSEEEECCCEECC
T ss_pred -hcceeeecCceEEEEeCC--ceEEEEEecCc---ccceeeeccCEEEEccCCcCC
Confidence 347777654 78888754 44443321111 011246899999999998875
No 211
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.90 E-value=3.7e-06 Score=82.04 Aligned_cols=67 Identities=9% Similarity=0.050 Sum_probs=47.9
Q ss_pred cccCccchhhhhcccccccccCCCCCCCCC--C-----------------CCCCcEEEECCCHHHHHHHHhhccC--CCe
Q 013546 76 HYQYHNAERIVEESESEYQELSYPGLEATK--P-----------------GEKPRVVVLGTGWGACRFLKGIDTK--IYD 134 (441)
Q Consensus 76 ~~~~~~~e~~i~~~~~~~~~~~~~~~~~~~--~-----------------~~~k~VvIIGgG~aGl~aA~~L~~~--g~~ 134 (441)
.++++.+|+++.|...+ ..|+.+..++ . ....+|+|||||++|+++|..|++. |++
T Consensus 16 ~v~~~~~er~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~la~~~~g~~ 92 (326)
T 2gjc_A 16 HLNSTPVTHCLSDIVKK---EDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLK 92 (326)
T ss_dssp CGGGSCCCCTTTTTCCS---TTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSC
T ss_pred ccchHHHHHHHHHHHHh---cCCCccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCe
Confidence 45666688888886655 3443322111 0 0112899999999999999999987 999
Q ss_pred EEEEcCCCCcc
Q 013546 135 AVCISPRNHMV 145 (441)
Q Consensus 135 Vtvie~~~~~~ 145 (441)
|+|+|+.+...
T Consensus 93 V~v~e~~~~~g 103 (326)
T 2gjc_A 93 VCIIESSVAPG 103 (326)
T ss_dssp EEEECSSSSCC
T ss_pred EEEEecCcccc
Confidence 99999987653
No 212
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.90 E-value=0.00013 Score=76.45 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.+++|+|||+|+.|+++|..|++.+.+||+|++.+..
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 3789999999999999999999999999999999864
No 213
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.84 E-value=2.3e-05 Score=84.37 Aligned_cols=150 Identities=14% Similarity=0.166 Sum_probs=102.5
Q ss_pred CCcEEEEC--CCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-
Q 013546 109 KPRVVVLG--TGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA- 185 (441)
Q Consensus 109 ~k~VvIIG--gG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 185 (441)
.++|+||| +|+.|+++|..|++.|.+|+++++.+.+.- . .........+.+. +. ..++.++.+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~--~--------~~~~~~~~~l~~~---l~-~~GV~i~~~~ 588 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSS--W--------TNNTFEVNRIQRR---LI-ENGVARVTDH 588 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTG--G--------GGGGTCHHHHHHH---HH-HTTCEEEESE
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccc--c--------cccchhHHHHHHH---HH-HCCCEEEcCc
Confidence 67899999 999999999999999999999999876541 0 0111111122222 22 347777765
Q ss_pred EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhccccc
Q 013546 186 SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSE 265 (441)
Q Consensus 186 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~ 265 (441)
.|++|+.+. +.+....+ ++..++++|.||+|+|.+|+.. . + ..+...
T Consensus 589 ~V~~i~~~~--~~v~~~~~------~~~~~i~aD~VV~A~G~~p~~~----l------~------~~l~~~--------- 635 (690)
T 3k30_A 589 AVVAVGAGG--VTVRDTYA------SIERELECDAVVMVTARLPREE----L------Y------LDLVAR--------- 635 (690)
T ss_dssp EEEEEETTE--EEEEETTT------CCEEEEECSEEEEESCEEECCH----H------H------HHHHHH---------
T ss_pred EEEEEECCe--EEEEEccC------CeEEEEECCEEEECCCCCCChH----H------H------HHHhhh---------
Confidence 788887643 44443211 1235789999999999988642 0 0 000000
Q ss_pred CCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 013546 266 NPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNK 345 (441)
Q Consensus 266 ~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~ 345 (441)
+. +| +.|+|||+|||+. ++.+..|+.||+.+|.||.+
T Consensus 636 -------------------------~~-------~t-~~~~VyaiGD~~~----------~~~~~~A~~~g~~aa~~i~~ 672 (690)
T 3k30_A 636 -------------------------RD-------AG-EIASVRGIGDAWA----------PGTIAAAVWSGRRAAEEFDA 672 (690)
T ss_dssp -------------------------HH-------HT-SCSEEEECGGGTS----------CBCHHHHHHHHHHHHHHTTC
T ss_pred -------------------------hc-------cc-CCCCEEEEeCCCc----------hhhHHHHHHHHHHHHHHHHh
Confidence 11 67 8999999999992 45677899999999999998
Q ss_pred Hhc
Q 013546 346 KIG 348 (441)
Q Consensus 346 ~l~ 348 (441)
.|.
T Consensus 673 ~l~ 675 (690)
T 3k30_A 673 VLP 675 (690)
T ss_dssp CCC
T ss_pred hcc
Confidence 875
No 214
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.83 E-value=1.5e-05 Score=83.71 Aligned_cols=36 Identities=11% Similarity=0.129 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFS 156 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 458999999999999999999999999999998754
No 215
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.81 E-value=1.2e-05 Score=80.03 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=32.0
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
||+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 7999999999999999999999999999997654
No 216
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.77 E-value=2.1e-05 Score=76.49 Aligned_cols=167 Identities=15% Similarity=0.172 Sum_probs=100.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC-CcccccchhhhhcCCCCccccc-----------------cch-hh
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN-HMVFTPLLASTCVGTLEFRSVA-----------------EPV-SR 169 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~-~~~~~~ll~~~~~g~~~~~~~~-----------------~~~-~~ 169 (441)
+++|+|||+|+.|+++|..|++.+ +|+++.+.+ .+.-............. +... ..+ ..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERAT-ERWKAQQEGREPDLPPGGFGDIVMVPP 240 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC-----------------------CBCCCHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHH-HHHhccccccCCCcccccccCcccChh
Confidence 679999999999999999999988 799998874 32210000000000000 0000 000 00
Q ss_pred hhhhhcCCCCEEEEEEEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhH
Q 013546 170 IQTSLSSDPNSYFYLASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNH 249 (441)
Q Consensus 170 ~~~~~~~~~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~ 249 (441)
....+. .++......+..++. +.+.+.++ .++++|.||+|+|.+|+.+-+...
T Consensus 241 ~~~~~~--~g~i~~~~~v~~~~~--~~v~~~~g-----------~~i~~D~vi~a~G~~p~~~~l~~~------------ 293 (357)
T 4a9w_A 241 VLDARA--RGVLAAVPPPARFSP--TGMQWADG-----------TERAFDAVIWCTGFRPALSHLKGL------------ 293 (357)
T ss_dssp HHHHHH--TTCCCEECCCSEEET--TEEECTTS-----------CEEECSEEEECCCBCCCCGGGTTT------------
T ss_pred HHHHHh--cCceEEecCcceEeC--CeeEECCC-----------CEecCCEEEECCCcCCCCcccCcc------------
Confidence 000011 122222334444443 33443331 378999999999999876422211
Q ss_pred HHHHHHHHHHhcccccCCCCceeEeeCceEEEEccCCcccCCceeeCCC--cccCCCCCEEEec--ccccccccCCCCCC
Q 013546 250 AQEIRKKLLLNLMLSENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEW--LRAPSVEDVFALG--DCAGFLEQTGKPVL 325 (441)
Q Consensus 250 a~~~~~~i~~~~~~a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~--lqt~~~~~VfA~G--D~a~~~~~~G~~~~ 325 (441)
.+. +.. |+|.||++ ++| +.|+|||+| ||+. +.
T Consensus 294 ----------gl~------------------------~~~-G~i~vd~~~l~~t-~~~~vya~Gd~d~~~--------~~ 329 (357)
T 4a9w_A 294 ----------DLV------------------------TPQ-GQVEVDGSGLRAL-AVPSVWLLGYGDWNG--------MA 329 (357)
T ss_dssp ----------TCB------------------------CTT-SCBCBCTTSCBBS-SCTTEEECSSCGGGS--------TT
T ss_pred ----------ccc------------------------CCC-CCccccCCcccCC-CCCCeEEeccccccc--------cc
Confidence 000 001 78999999 777 999999999 5552 24
Q ss_pred CchHHHHHHHHHHHHHHHHHHhc
Q 013546 326 PALAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 326 p~~a~~A~~qg~~aA~nI~~~l~ 348 (441)
+.++..|++||+.+|+||.+.|.
T Consensus 330 ~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 330 SATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp CSSTTTHHHHHHHHHHHHHHHTC
T ss_pred hhhhhhhHHHHHHHHHHHHHHHH
Confidence 56788899999999999999986
No 217
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.76 E-value=1.2e-05 Score=82.90 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHhhcc-CCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT-KIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~-~g~~Vtvie~~~~~~ 145 (441)
..+|+|||||++||+||..|++ .|++|+|+|++++++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 4589999999999999999987 599999999999876
No 218
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.73 E-value=2.2e-05 Score=78.89 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=34.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC-CeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI-YDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g-~~Vtvie~~~~~~ 145 (441)
.++|+|||||++||+||..|++.| ++|+|+|++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 568999999999999999999999 9999999988764
No 219
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.73 E-value=2.1e-05 Score=80.30 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=34.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~~~~ 145 (441)
+++|+|||||.+||++|.+|++.|+ +|+|+|++++.+
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 4689999999999999999999999 999999998775
No 220
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.73 E-value=2.6e-05 Score=77.71 Aligned_cols=38 Identities=13% Similarity=0.153 Sum_probs=35.0
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCC-CCcc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPR-NHMV 145 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~-~~~~ 145 (441)
.+++|+|||||++||++|..|.+.|++|+|+|++ ++++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVG 81 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCB
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccC
Confidence 4679999999999999999999999999999999 7664
No 221
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.71 E-value=2e-05 Score=81.75 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.++|+|||||++||+||..|++.|++|+|+|++++.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 468999999999999999999999999999998765
No 222
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.70 E-value=2.4e-05 Score=78.78 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=32.5
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
++|+|||||++||++|..|++.|++|+|+|++++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 37999999999999999999999999999998754
No 223
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.69 E-value=2e-05 Score=79.95 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 5789999999999999999999999999999986
No 224
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.68 E-value=7.1e-06 Score=89.28 Aligned_cols=97 Identities=8% Similarity=-0.002 Sum_probs=61.9
Q ss_pred cCCCcccCCCcccccccccCcCCCCcCCCcccCccchhhhhccccccc-ccCC--CCCCCCCCCCCCcEEEECCCHHHHH
Q 013546 47 RNSSLSYLPSSIRMTTHMSSWSRGIKTTPHYQYHNAERIVEESESEYQ-ELSY--PGLEATKPGEKPRVVVLGTGWGACR 123 (441)
Q Consensus 47 ~~~~~~~~~grvcp~~ce~~c~~~~~~~~~~~~~~~e~~i~~~~~~~~-~~~~--~~~~~~~~~~~k~VvIIGgG~aGl~ 123 (441)
..|++..++.+.|...+++.+...+. ....+..+++++.+...... .... ...+.+.....++|+|||||++|++
T Consensus 273 ~~np~~~l~~~~~~~~~~~r~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~Gl~ 350 (776)
T 4gut_A 273 YTNCKEALTPQKCIPHIIVRGLVRIR--CVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLA 350 (776)
T ss_dssp HHCTTSCCCHHHHGGGCCCSSTHHHH--HHHHHHHHHHHHHHHTSSSCTTCCCCGGGCSSCGGGTSCEEEEECCSHHHHH
T ss_pred HHCCceeeeHHHhhhhcccccccccc--cHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCCCeEEEECCCHHHHH
Confidence 45888888888887666654432211 11223456677776443211 0000 0111222334579999999999999
Q ss_pred HHHhhccCCCeEEEEcCCCCcc
Q 013546 124 FLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 124 aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
+|..|++.|++|+|+|+.+..+
T Consensus 351 aA~~l~~~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 351 AARQLHNFGIKVTVLEAKDRIG 372 (776)
T ss_dssp HHHHHHHHTCEEEEECSSSSSC
T ss_pred HHHHHHHCCCcEEEEeccccee
Confidence 9999999999999999977554
No 225
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.68 E-value=7.4e-05 Score=80.12 Aligned_cols=29 Identities=10% Similarity=-0.019 Sum_probs=25.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVC 137 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtv 137 (441)
+++|+|||||+.|+++|..|++.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 67999999999999999999988865553
No 226
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.67 E-value=2.5e-05 Score=76.37 Aligned_cols=35 Identities=9% Similarity=0.142 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..+|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 45899999999999999999999999999999863
No 227
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.67 E-value=2.7e-05 Score=78.16 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=32.7
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
++|+|||||.+||++|..|++.|++|+|+|+++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 37999999999999999999999999999998764
No 228
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.66 E-value=1.8e-05 Score=82.14 Aligned_cols=37 Identities=16% Similarity=0.373 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC-CeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI-YDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g-~~Vtvie~~~~~~ 145 (441)
.++|+|||||++||+||..|.+.| ++|+|+|++++++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 468999999999999999999999 9999999988654
No 229
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.66 E-value=0.00011 Score=79.48 Aligned_cols=158 Identities=16% Similarity=0.202 Sum_probs=105.2
Q ss_pred CCcEEEEC--CCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-
Q 013546 109 KPRVVVLG--TGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA- 185 (441)
Q Consensus 109 ~k~VvIIG--gG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 185 (441)
+++|+||| ||+.|+++|..|++.|.+||++++.+ +. +.. . .... ...+.+. +. ..++.++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~--~~~---~---~~~~--~~~~~~~---l~-~~GV~i~~~~ 592 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LA--NYM---H---FTLE--YPNMMRR---LH-ELHVEELGDH 592 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TT--HHH---H---HTTC--HHHHHHH---HH-HTTCEEECSE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cc--ccc---c---cccc--HHHHHHH---HH-hCCCEEEcCc
Confidence 67999999 99999999999999999999999987 43 100 0 0000 1112222 22 347777665
Q ss_pred EEEEEeCCCCEEEEEecCCCC-C-----------CCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHH
Q 013546 186 SCIGIDTDKHEVYCETVNNGK-L-----------SHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEI 253 (441)
Q Consensus 186 ~v~~id~~~~~v~~~~~~~~~-~-----------~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~ 253 (441)
.+++|+.+ .+.+.....++ . ...+++.++++|.||+|+|.+|+..- +
T Consensus 593 ~v~~i~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l----------~--------- 651 (729)
T 1o94_A 593 FCSRIEPG--RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTL----------W--------- 651 (729)
T ss_dssp EEEEEETT--EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHH----------H---------
T ss_pred EEEEEECC--eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHH----------H---------
Confidence 68888754 34444321110 0 01122335899999999998886420 0
Q ss_pred HHHHHHhcccccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCchHHHHH
Q 013546 254 RKKLLLNLMLSENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAE 333 (441)
Q Consensus 254 ~~~i~~~~~~a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~ 333 (441)
..+. ..||+++|| ++|+|||+|||+. +.++..|+
T Consensus 652 -~~l~----------------------------------~~vd~~~~t-~~~~VyAiGD~~~----------~~~~~~A~ 685 (729)
T 1o94_A 652 -NELK----------------------------------ARESEWAEN-DIKGIYLIGDAEA----------PRLIADAT 685 (729)
T ss_dssp -HHHH----------------------------------HTGGGTGGG-TCCEEEECGGGTS----------CCCHHHHH
T ss_pred -HHHh----------------------------------hhccccccc-CCCCeEEEeCccc----------hhhHHHHH
Confidence 0000 125788999 9999999999982 46788999
Q ss_pred HHHHHHHHHHHHHhc
Q 013546 334 RQGKYLAELFNKKIG 348 (441)
Q Consensus 334 ~qg~~aA~nI~~~l~ 348 (441)
+||+.+|.||.+.+.
T Consensus 686 ~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 686 FTGHRVAREIEEANP 700 (729)
T ss_dssp HHHHHHHHTTTSSCT
T ss_pred HHHHHHHHHhhhhcc
Confidence 999999999987664
No 230
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.65 E-value=3.6e-05 Score=79.03 Aligned_cols=37 Identities=22% Similarity=0.182 Sum_probs=34.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
.++|+|||||++||++|..|++.|++|+|+|++++.+
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 5699999999999999999999999999999998764
No 231
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.64 E-value=1.6e-05 Score=80.73 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC------CeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI------YDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g------~~Vtvie~~~~~~ 145 (441)
+++|+|||||++||++|..|++.| ++|+|+|++++.+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 468999999999999999999999 9999999987653
No 232
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.64 E-value=2.7e-05 Score=78.44 Aligned_cols=36 Identities=8% Similarity=0.194 Sum_probs=33.2
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
.+|+|||||++|+++|..|++.|++|+|+|++++++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcc
Confidence 479999999999999999999999999999987654
No 233
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.63 E-value=3.8e-05 Score=78.41 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=34.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
..+|+|||||.+||++|..|++.|++|+|+|++++.+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 4689999999999999999999999999999999875
No 234
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.60 E-value=3.7e-05 Score=77.15 Aligned_cols=36 Identities=8% Similarity=0.191 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCe-EEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYD-AVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~-Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|++ |+|||+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 56899999999999999999999999 9999998754
No 235
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.56 E-value=4.8e-05 Score=78.29 Aligned_cols=37 Identities=11% Similarity=0.079 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
+++|+|||||++||++|..|++.|++|+|+|++++.+
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 5799999999999999999999999999999987653
No 236
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.55 E-value=3.6e-05 Score=75.78 Aligned_cols=35 Identities=11% Similarity=0.094 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.++|+|||||++|+++|..|+ .|++|+|+|+.+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 579999999999999999999 59999999998654
No 237
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.54 E-value=3e-05 Score=76.87 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 358999999999999999999999999999998754
No 238
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.54 E-value=5.2e-05 Score=77.46 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=33.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
.++|+|||||++||++|..|++.|++|+|+|++++.+
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLG 52 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSB
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC
Confidence 5689999999999999999999999999999998653
No 239
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.54 E-value=3.9e-05 Score=78.45 Aligned_cols=168 Identities=22% Similarity=0.190 Sum_probs=101.9
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA- 185 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 185 (441)
.+++|+|||||..|+.+|..+.+.|. +||++++.+...+.... . .+... . ..++.|+..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~----------~----e~~~~----~-~~Gv~~~~~~ 323 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQ----------R----EVAHA----E-EEGVEFIWQA 323 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCH----------H----HHHHH----H-HTTCEEECCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCH----------H----HHHHH----H-HCCCEEEeCC
Confidence 47899999999999999999999887 59999998754211100 0 01111 1 123333221
Q ss_pred EEEEEeCCCCE--EEEEe-----c-CCCCC---CCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHH
Q 013546 186 SCIGIDTDKHE--VYCET-----V-NNGKL---SHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIR 254 (441)
Q Consensus 186 ~v~~id~~~~~--v~~~~-----~-~~~~~---~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~ 254 (441)
.++++..+.+. +.+.. . .++.. ..++++.++++|.||+|+|..|+... .
T Consensus 324 ~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~---~----------------- 383 (456)
T 2vdc_G 324 APEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLP---N----------------- 383 (456)
T ss_dssp SSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHH---H-----------------
T ss_pred CceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcch---h-----------------
Confidence 11111110000 11110 0 00000 00122357899999999998775320 0
Q ss_pred HHHHHhcccccCCCCceeEeeCceEEEEccCCcccCCceeeCCC-cccCCCCCEEEecccccccccCCCCCCCchHHHHH
Q 013546 255 KKLLLNLMLSENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEW-LRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAE 333 (441)
Q Consensus 255 ~~i~~~~~~a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~-lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~ 333 (441)
+.... | +++ +.. |+|.||++ +|| +.|+|||+|||+. .|.+++.|+
T Consensus 384 --~l~~~------g---l~~------------~~~-G~i~vd~~~~~T-s~~~VfA~GD~~~---------g~~~v~~A~ 429 (456)
T 2vdc_G 384 --AFDEP------E---LKV------------TRW-GTLLVDHRTKMT-NMDGVFAAGDIVR---------GASLVVWAI 429 (456)
T ss_dssp --HHHST------T---SCB------------CTT-SSBCCCTTTCBC-SSTTEEECGGGGS---------SCCSHHHHH
T ss_pred --hcccC------C---eeE------------CCC-CCEEECCCCCcC-CCCCEEEeccccC---------CchHHHHHH
Confidence 00000 0 111 111 78999997 999 9999999999992 468999999
Q ss_pred HHHHHHHHHHHHHhc
Q 013546 334 RQGKYLAELFNKKIG 348 (441)
Q Consensus 334 ~qg~~aA~nI~~~l~ 348 (441)
.||+.||.+|..+|.
T Consensus 430 ~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 430 RDGRDAAEGIHAYAK 444 (456)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999996
No 240
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.53 E-value=3.3e-05 Score=78.35 Aligned_cols=37 Identities=14% Similarity=0.201 Sum_probs=34.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
.++|+|||||++||++|..|++.|++|+|+|++++++
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 4589999999999999999999999999999988764
No 241
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.53 E-value=6e-05 Score=77.60 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
.++|+|||||++||++|..|++.|++|+|+|++++++
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 5799999999999999999999999999999998763
No 242
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.53 E-value=4.9e-05 Score=78.13 Aligned_cols=35 Identities=14% Similarity=0.357 Sum_probs=33.1
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
++|+|||||++||++|..|++.|++|+|+|+++++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRI 74 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 58999999999999999999999999999998765
No 243
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.52 E-value=5.5e-05 Score=75.91 Aligned_cols=37 Identities=16% Similarity=0.283 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccC-CCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK-IYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~-g~~Vtvie~~~~~~ 145 (441)
..+|+|||||++|+++|..|++. |++|+|+|++++++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 56899999999999999999998 99999999998775
No 244
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.51 E-value=7.3e-05 Score=73.51 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+..+|+|||||++|+++|..|++.|++|+|+|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 35689999999999999999999999999999875
No 245
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.49 E-value=8.3e-05 Score=74.23 Aligned_cols=37 Identities=16% Similarity=0.364 Sum_probs=34.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
..+|+|||||++|+++|..|++.|++|+|+|++++.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 3589999999999999999999999999999998775
No 246
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.48 E-value=7.6e-05 Score=75.37 Aligned_cols=35 Identities=11% Similarity=0.238 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~ 143 (441)
..+|+|||||++|+++|..|++.|+ +|+|+|+.+.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 4689999999999999999999999 9999999864
No 247
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.46 E-value=6.9e-05 Score=76.52 Aligned_cols=36 Identities=11% Similarity=0.197 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC--CeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI--YDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g--~~Vtvie~~~~~ 144 (441)
+++|+|||||++|+++|..|++.| ++|+|+|+++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 569999999999999999999999 999999998764
No 248
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.46 E-value=6.3e-05 Score=74.73 Aligned_cols=35 Identities=11% Similarity=0.305 Sum_probs=32.3
Q ss_pred CcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCCc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNHM 144 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~~ 144 (441)
++|+|||||++|+++|..|++. |++|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3799999999999999999998 9999999998765
No 249
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.46 E-value=5.6e-05 Score=75.24 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.+|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5899999999999999999999999999999763
No 250
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.44 E-value=8.9e-05 Score=74.38 Aligned_cols=37 Identities=11% Similarity=0.254 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
..+|+|||||++|+++|..|++.|++|+|+|++++++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 5689999999999999999999999999999998775
No 251
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.41 E-value=0.00017 Score=80.54 Aligned_cols=151 Identities=13% Similarity=0.153 Sum_probs=105.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC 187 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 187 (441)
.++|+|||+|+.|+++|..|++.|.+|+|+++.+.+. . . .+. +. ..++.++.+ .+
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-----~---------~-----~~~----l~-~~GV~v~~~~~v 339 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-----A---------A-----AAQ----AV-ADGVQVISGSVV 339 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-----H---------H-----HHH----HH-HTTCCEEETEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-----h---------h-----HHH----HH-hCCeEEEeCCEe
Confidence 5789999999999999999999999999999987543 0 0 111 22 236666655 67
Q ss_pred EEEeC--CCC--EEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhccc
Q 013546 188 IGIDT--DKH--EVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLML 263 (441)
Q Consensus 188 ~~id~--~~~--~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~ 263 (441)
.+|+. +.+ .+.+.+.+..+ ..++..++++|.|++|+|.+|+... ...
T Consensus 340 ~~i~~~~~~~v~~v~~~~~~~~~--~~G~~~~i~~D~Vv~a~G~~P~~~l--------------------~~~------- 390 (965)
T 2gag_A 340 VDTEADENGELSAIVVAELDEAR--ELGGTQRFEADVLAVAGGFNPVVHL--------------------HSQ------- 390 (965)
T ss_dssp EEEEECTTSCEEEEEEEEECTTC--CEEEEEEEECSEEEEECCEEECCHH--------------------HHH-------
T ss_pred EEEeccCCCCEEEEEEEeccccC--CCCceEEEEcCEEEECCCcCcChHH--------------------HHh-------
Confidence 88875 333 45555410000 0011247899999999999887420 000
Q ss_pred ccCCCCceeEeeCceEEEEccCCcccCCceeeCCCcc-----cCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHH
Q 013546 264 SENPGDTVQLFSKYFVITITLSFLVRLSQIGVDEWLR-----APSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKY 338 (441)
Q Consensus 264 a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~~lq-----t~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~ 338 (441)
.+ |.|.||++++ | +.|+|||+|||+.. +.+ ..|+.||+.
T Consensus 391 ~~-------------------------g~i~vd~~~~~~v~~t-s~p~IyAaGD~a~~---------~~l-~~A~~~G~~ 434 (965)
T 2gag_A 391 RQ-------------------------GKLDWDTTIHAFVPAD-AVANQHLAGAMTGR---------LDT-ASALSTGAA 434 (965)
T ss_dssp TT-------------------------CCEEEETTTTEEEECS-CCTTEEECGGGGTC---------CSH-HHHHHHHHH
T ss_pred CC-------------------------CcEEEcCcccccccCC-CCCCEEEEEecCCc---------hhH-HHHHHHHHH
Confidence 01 5688898887 6 89999999999932 334 489999999
Q ss_pred HHHHHHHHhc
Q 013546 339 LAELFNKKIG 348 (441)
Q Consensus 339 aA~nI~~~l~ 348 (441)
+|.||...+.
T Consensus 435 aA~~i~~~lg 444 (965)
T 2gag_A 435 TGAAAATAAG 444 (965)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999998884
No 252
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.40 E-value=0.00011 Score=76.76 Aligned_cols=34 Identities=9% Similarity=0.152 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHhhcc---CCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT---KIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~---~g~~Vtvie~~~ 142 (441)
.++|||||||++|+++|..|++ .|++|+|||+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 5789999999999999999999 999999999975
No 253
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.39 E-value=9.5e-05 Score=73.09 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..+|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 35899999999999999999999999999999763
No 254
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.34 E-value=8.2e-05 Score=73.16 Aligned_cols=34 Identities=6% Similarity=-0.018 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.+|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4899999999999999999999999999999764
No 255
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.33 E-value=0.00017 Score=77.50 Aligned_cols=36 Identities=6% Similarity=0.001 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||.+|+++|..|++.|++|+|||+.+..
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 468999999999999999999999999999997543
No 256
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.32 E-value=0.00015 Score=74.67 Aligned_cols=37 Identities=11% Similarity=0.041 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC-CeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI-YDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g-~~Vtvie~~~~~~ 145 (441)
.++|+|||||++|+++|..|++.| .+|+|+|++++++
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 568999999999999999999998 7999999998764
No 257
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.32 E-value=0.00014 Score=72.18 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=33.4
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
.+|+|||||++|+++|..|++.|++|+|+|++++++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 379999999999999999999999999999998765
No 258
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.30 E-value=0.00028 Score=79.33 Aligned_cols=167 Identities=18% Similarity=0.093 Sum_probs=105.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-E
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-S 186 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 186 (441)
+++|+|||||+.|+++|..+.+.|. +||++++.+.... +. ...+ +.. +. ..++.|+.. .
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~-~~---------~~~e----~~~----~~-~~Gv~~~~~~~ 392 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNI-RA---------VPEE----VEL----AK-EEKCEFLPFLS 392 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGC-CS---------CHHH----HHH----HH-HTTCEEECSEE
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhC-CC---------CHHH----HHH----HH-HcCCEEEeCCC
Confidence 5699999999999999999999996 8999999873220 10 0111 111 11 235655432 4
Q ss_pred EEEEeCCCCEE---EEEec--CCCCC--CCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHH
Q 013546 187 CIGIDTDKHEV---YCETV--NNGKL--SHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLL 259 (441)
Q Consensus 187 v~~id~~~~~v---~~~~~--~~~~~--~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~ 259 (441)
+.++..++..+ .+... +.++. ..++++.++++|.||+|+|..|+... + ..
T Consensus 393 ~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~---l----------------~~---- 449 (1025)
T 1gte_A 393 PRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPK---V----------------KE---- 449 (1025)
T ss_dssp EEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHH---H----------------HH----
T ss_pred ceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchh---h----------------hh----
Confidence 45554322222 22210 00000 00122347899999999998763211 0 00
Q ss_pred hcccccCCCCceeEeeCceEEEEccCCcccCCceeeCC-CcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHH
Q 013546 260 NLMLSENPGDTVQLFSKYFVITITLSFLVRLSQIGVDE-WLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKY 338 (441)
Q Consensus 260 ~~~~a~~~G~~~vE~a~~v~V~il~~~~~~lG~I~Vd~-~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~ 338 (441)
.+ . ++++. .. |+|.||+ ++|| +.|+|||+|||+. .|.+++.|++||+.
T Consensus 450 ~~--~------gl~~~------------~~-G~I~vd~~~~~T-s~~~VfA~GD~~~---------~~~~~~~A~~~G~~ 498 (1025)
T 1gte_A 450 AL--S------PIKFN------------RW-DLPEVDPETMQT-SEPWVFAGGDIVG---------MANTTVESVNDGKQ 498 (1025)
T ss_dssp HT--T------TSCBC------------TT-SSBCCCTTTCBC-SSTTEEECSGGGC---------SCCCHHHHHHHHHH
T ss_pred cc--c------CceEC------------CC-CCEEECCCCCcc-CCCCEEEeCCCCC---------CchHHHHHHHHHHH
Confidence 00 0 01111 11 7899997 8999 9999999999992 36799999999999
Q ss_pred HHHHHHHHhc
Q 013546 339 LAELFNKKIG 348 (441)
Q Consensus 339 aA~nI~~~l~ 348 (441)
||.+|..+|.
T Consensus 499 aA~~i~~~L~ 508 (1025)
T 1gte_A 499 ASWYIHKYIQ 508 (1025)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998885
No 259
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.29 E-value=0.00083 Score=68.55 Aligned_cols=181 Identities=16% Similarity=0.162 Sum_probs=109.1
Q ss_pred CCCcEEEECCCHHHHHHHHhhccC--------------------CC-eEEEEcCCCCcc--cccc-------hhhhhcCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTK--------------------IY-DAVCISPRNHMV--FTPL-------LASTCVGT 157 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~--------------------g~-~Vtvie~~~~~~--~~~l-------l~~~~~g~ 157 (441)
.+++|+|||+|+.|+++|..|++. |. +|+||++.+.+. |++. ++.... .
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~-~ 224 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDV-V 224 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEE-E
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCcee-e
Confidence 367999999999999999999863 54 999999987542 2210 110000 0
Q ss_pred CCccccccc----------h----hhhhhhhcCC------CCEEEEEE-EEEEEeCCCC--EEEEEecC--CCC-----C
Q 013546 158 LEFRSVAEP----------V----SRIQTSLSSD------PNSYFYLA-SCIGIDTDKH--EVYCETVN--NGK-----L 207 (441)
Q Consensus 158 ~~~~~~~~~----------~----~~~~~~~~~~------~~v~~~~~-~v~~id~~~~--~v~~~~~~--~~~-----~ 207 (441)
..++++... . .+........ .++.++.. .+.+|..+.+ .+.+.... .++ .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~ 304 (456)
T 1lqt_A 225 IDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAA 304 (456)
T ss_dssp CCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEE
T ss_pred eChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccc
Confidence 001111000 0 0111111122 46776654 6777765432 35554210 000 0
Q ss_pred CCCCCcceeeCCEEEEcCCCCcCCCCCCCcccccccccCHhHHHHHHHHHHHhcccccCCCCceeEeeCceEEEEccCCc
Q 013546 208 SHEPHQFKVAYDKLVIAAGAEPLTFGIKGVKENAYFLREVNHAQEIRKKLLLNLMLSENPGDTVQLFSKYFVITITLSFL 287 (441)
Q Consensus 208 ~~~~~~~~i~yD~LvlAtGs~p~~~~ipG~~~~~~~l~~~~~a~~~~~~i~~~~~~a~~~G~~~vE~a~~v~V~il~~~~ 287 (441)
...++..++++|.||+|+|.+|+. ++|. . ++
T Consensus 305 ~~~g~~~~i~~d~vi~a~G~~p~~--l~gl-----~------------------------------------------~d 335 (456)
T 1lqt_A 305 KDTGEREELPAQLVVRSVGYRGVP--TPGL-----P------------------------------------------FD 335 (456)
T ss_dssp EEEEEEEEEECSEEEECSCEECCC--CTTS-----C------------------------------------------CB
T ss_pred cCCCceEEEEcCEEEEccccccCC--CCCC-----c------------------------------------------cc
Confidence 001223468999999999998876 2342 0 11
Q ss_pred ccCCceeeCCCcccCCCCCEEEecccccccccCCCCCCCc-hHHHHHHHHHHHHHHHHHHhc
Q 013546 288 VRLSQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPA-LAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 288 ~~lG~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~-~a~~A~~qg~~aA~nI~~~l~ 348 (441)
.. |+|.||+++|+++.|+|||+|||+.. |. .+..|+.||+.+|.||.+.+.
T Consensus 336 ~~-g~i~vn~~~rvt~~pgvya~GD~~~g---------p~~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 336 DQ-SGTIPNVGGRINGSPNEYVVGWIKRG---------PTGVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp TT-TTBCCEETTEETTCSSEEECTHHHHC---------SCSCTTHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCeeECCCCcCCCCCCEEEEeccCCC---------CchhHHHHHHHHHHHHHHHHHHHH
Confidence 11 67899999994499999999999832 33 345799999999999998886
No 260
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.29 E-value=0.00016 Score=71.87 Aligned_cols=33 Identities=18% Similarity=0.068 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++|+|||||+||+++|..|++.|++|+|||+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 589999999999999999999999999999875
No 261
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.28 E-value=0.00016 Score=75.26 Aligned_cols=34 Identities=12% Similarity=0.092 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHhhcc---CCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT---KIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~---~g~~Vtvie~~~ 142 (441)
..+|+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 5689999999999999999999 999999999965
No 262
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.27 E-value=0.00013 Score=76.38 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=32.6
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.+|+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 58999999999999999999999999999998754
No 263
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.23 E-value=0.00065 Score=69.42 Aligned_cols=49 Identities=8% Similarity=0.042 Sum_probs=41.3
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCc-hHHHHHHHHHHHHHHHHHHhc
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPA-LAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~-~a~~A~~qg~~aA~nI~~~l~ 348 (441)
|+|.||+++||.+.|+|||+|||+. .|. .+..|+.||+.+|.||...|.
T Consensus 346 g~i~vn~~~rt~~~p~vya~Gd~~~---------g~~~~i~~a~~~g~~aa~~i~~~l~ 395 (460)
T 1cjc_A 346 LGVVPNMEGRVVDVPGLYCSGWVKR---------GPTGVITTTMTDSFLTGQILLQDLK 395 (460)
T ss_dssp TTBCCEETTEETTCTTEEECTHHHH---------CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeECCCCcCcCCCCEEEEEeCCc---------CCCccHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999933799999999993 133 466899999999999999886
No 264
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.22 E-value=0.00014 Score=75.11 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHhhcc---CCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT---KIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~---~g~~Vtvie~~~ 142 (441)
.++|+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 4589999999999999999999 999999999975
No 265
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.19 E-value=0.0002 Score=74.37 Aligned_cols=35 Identities=9% Similarity=0.107 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHhhcc------------CCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT------------KIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~------------~g~~Vtvie~~~~ 143 (441)
.++|+|||||+||+.+|..|++ .|++|+|||+.+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 4689999999999999999999 8999999998653
No 266
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.16 E-value=0.00029 Score=71.33 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=34.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
..+|+|||+|++|+.+|..|++.|++|+|+|++++.+
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 4689999999999999999999999999999998765
No 267
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.16 E-value=0.00017 Score=70.55 Aligned_cols=32 Identities=28% Similarity=0.267 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHhhccCC------CeEEEEcCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKI------YDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g------~~Vtvie~~~ 142 (441)
+|+|||||.+|+++|..|++.| ++|+|+|+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 7999999999999999999987 9999999986
No 268
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.12 E-value=0.00029 Score=75.09 Aligned_cols=36 Identities=8% Similarity=0.150 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHhhcc-CCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT-KIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~-~g~~Vtvie~~~~~ 144 (441)
..+|+||||||+|+++|..|++ .|++|+|||+.+..
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 3589999999999999999999 99999999998654
No 269
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.11 E-value=0.00027 Score=73.05 Aligned_cols=34 Identities=9% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+|+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4589999999999999999999999999999975
No 270
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.11 E-value=0.00017 Score=73.10 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC-CeEEEEcCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI-YDAVCISPR 141 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g-~~Vtvie~~ 141 (441)
..+|+|||||++|+++|..|++.| ++|+|||++
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 468999999999999999999999 999999993
No 271
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.10 E-value=0.0002 Score=75.44 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccC------CCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK------IYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~------g~~Vtvie~~~~~ 144 (441)
..+|+|||||+||+++|..|++. |++|+|||+.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 36899999999999999999998 9999999998754
No 272
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.07 E-value=0.00022 Score=71.40 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~ 142 (441)
.+|+|||||++|+++|..|++. |++|+|||+.+
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 5899999999999999999998 99999999975
No 273
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.05 E-value=0.00036 Score=72.26 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||++|+++|..|++.|++|+|+|+.+..
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 358999999999999999999999999999998754
No 274
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=96.96 E-value=0.00045 Score=70.76 Aligned_cols=38 Identities=18% Similarity=0.210 Sum_probs=35.0
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
+..+|+|||+|.+|+.+|..|++.|++|+|+|++++.+
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYG 56 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 35689999999999999999999999999999998765
No 275
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.93 E-value=0.00055 Score=69.88 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~~ 144 (441)
..+|+|||||++|+.+|..|.+.|+ +|+|+|+++++
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 4689999999999999999999998 89999998654
No 276
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=96.93 E-value=0.00051 Score=72.94 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
..+|+|||||++|+.+|..|++.|++|+|||+.+...
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 4589999999999999999999999999999987554
No 277
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.89 E-value=0.00059 Score=71.55 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+|+|||||++|+.+|..|++.|++|+|+|+.+
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4589999999999999999999999999999985
No 278
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.85 E-value=0.00064 Score=74.66 Aligned_cols=35 Identities=17% Similarity=0.379 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~ 143 (441)
..+|+|||||++|+++|..|++.|+ +|+|||+.+.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 4689999999999999999999998 9999999864
No 279
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.85 E-value=0.00038 Score=74.65 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=33.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC--------CeEEEEcCCC-Cc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI--------YDAVCISPRN-HM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g--------~~Vtvie~~~-~~ 144 (441)
+++|+|||||++||++|..|.+.| ++|+|+|+++ ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 568999999999999999999888 9999999998 77
No 280
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.80 E-value=0.00073 Score=72.32 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHhhcc-----CCCeEEEEcCCCCc
Q 013546 110 PRVVVLGTGWGACRFLKGIDT-----KIYDAVCISPRNHM 144 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~-----~g~~Vtvie~~~~~ 144 (441)
.+|+||||||+||++|..|++ .|++|+|||+.+..
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 479999999999999999999 99999999997643
No 281
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.78 E-value=0.00077 Score=70.80 Aligned_cols=34 Identities=9% Similarity=0.097 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+|+|||||.+|+++|..|++.|++|+|+|+.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3589999999999999999999999999999975
No 282
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.75 E-value=0.00081 Score=70.91 Aligned_cols=34 Identities=21% Similarity=0.093 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.+|+|||||+||+++|..|++.|.+|+|+|+.+.
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~ 41 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQSGQTCALLSKVFP 41 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 4899999999999999999999999999999753
No 283
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.72 E-value=0.00099 Score=69.51 Aligned_cols=55 Identities=20% Similarity=0.206 Sum_probs=40.1
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCc-hHHHHHHHHHHHHHHHHHHh
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPA-LAQVAERQGKYLAELFNKKI 347 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~-~a~~A~~qg~~aA~nI~~~l 347 (441)
|.|.||.+.|| ++|++||+|+|+... ..|...... ....|+-.|+.|++++.+.+
T Consensus 355 GGi~vd~~~~t-~I~GLyAaGE~a~~g-~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 355 GGVMVDDHGRT-DVEGLYAIGEVSYTG-LHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp CEEECCTTCBC-SSBTEEECGGGEECS-SSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEECCCCCC-ccCCEEecccccccc-ccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 99999999998 999999999998321 123222222 34467778999999988665
No 284
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.70 E-value=0.0016 Score=65.85 Aligned_cols=105 Identities=10% Similarity=0.146 Sum_probs=59.4
Q ss_pred CcEEEECCCHH----H--HHHH----HhhccCCCe-----EEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhh
Q 013546 110 PRVVVLGTGWG----A--CRFL----KGIDTKIYD-----AVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSL 174 (441)
Q Consensus 110 k~VvIIGgG~a----G--l~aA----~~L~~~g~~-----Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~ 174 (441)
++++|||+|+. | +++| ..|++.|.+ ||++++.+.+... +..........+.+. +
T Consensus 150 ~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~--------~l~~~~~~~~~~~~~---l 218 (437)
T 3sx6_A 150 PGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHL--------GIQGVGDSKGILTKG---L 218 (437)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCT--------TTTCCTTHHHHHHHH---H
T ss_pred CCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCcccccc--------ccCcchHHHHHHHHH---H
Confidence 35789998654 3 6666 566667764 9999998865310 000111122222222 2
Q ss_pred cCCCCEEEEEE-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcC
Q 013546 175 SSDPNSYFYLA-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPL 230 (441)
Q Consensus 175 ~~~~~v~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~ 230 (441)
. ..+++++.+ .+++|+.+ .+.+++...++. ..+..++++|.+++++|..++
T Consensus 219 ~-~~gI~~~~~~~v~~v~~~--~v~~~~~~~~g~--~~~~~~i~~D~vv~~~g~~~~ 270 (437)
T 3sx6_A 219 K-EEGIEAYTNCKVTKVEDN--KMYVTQVDEKGE--TIKEMVLPVKFGMMIPAFKGV 270 (437)
T ss_dssp H-HTTCEEECSEEEEEEETT--EEEEEEECTTSC--EEEEEEEECSEEEEECCEECC
T ss_pred H-HCCCEEEcCCEEEEEECC--eEEEEecccCCc--cccceEEEEeEEEEcCCCcCc
Confidence 2 347777654 78888754 455554221110 011347899999999996654
No 285
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.67 E-value=0.001 Score=70.63 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+|+|||||.||+++|..|++.|.+|+|+|+..
T Consensus 19 ~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 19 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 489999999999999999999999999999975
No 286
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.61 E-value=0.0012 Score=70.41 Aligned_cols=56 Identities=21% Similarity=0.227 Sum_probs=40.4
Q ss_pred CceeeCCCcccCCCCCEEEecccccccccCCCCCCCc-hHHHHHHHHHHHHHHHHHHhc
Q 013546 291 SQIGVDEWLRAPSVEDVFALGDCAGFLEQTGKPVLPA-LAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 291 G~I~Vd~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~-~a~~A~~qg~~aA~nI~~~l~ 348 (441)
|.|.||.+.|| ++|++||+|+|+... ..|...... ..-.|+-.|+.|++++.+++.
T Consensus 373 GGi~vd~~~~v-~IpGLYAaGE~a~~g-~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 373 GGIRTDYRGEA-KLKGLFSAGEAACWD-MHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp CEEECCTTSBC-SSBTEEECGGGEECC-SSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEECCCCce-ecCCEEecccccccc-ccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999 999999999986311 123222222 334577789999999887663
No 287
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.52 E-value=0.0027 Score=60.62 Aligned_cols=88 Identities=11% Similarity=0.015 Sum_probs=54.8
Q ss_pred CCcEEEECCC-HHHHHHHHhhccCCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEEEE
Q 013546 109 KPRVVVLGTG-WGACRFLKGIDTKIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLASC 187 (441)
Q Consensus 109 ~k~VvIIGgG-~aGl~aA~~L~~~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 187 (441)
.++++||||| .+++++|..+++.+.+||++++.+.+. . .+.+. +. ..++.++...+
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~--~-----------------~~~~~---l~-~~g~~~~~~~v 202 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS--Q-----------------TIMDE---LS-NKNIPVITESI 202 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC--H-----------------HHHHH---HH-TTTCCEECSCE
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch--h-----------------hhhhh---hh-ccceeEeeeeE
Confidence 4567777776 567899999999999999998765332 0 01111 22 23455555556
Q ss_pred EEEeCCCCE---EEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcC
Q 013546 188 IGIDTDKHE---VYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPL 230 (441)
Q Consensus 188 ~~id~~~~~---v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~ 230 (441)
..+..+... +.+.+ ..+++.|.+|++.|..|+
T Consensus 203 ~~~~~~~~~~~~v~~~~-----------g~~i~~~~~vi~~g~~~~ 237 (304)
T 4fk1_A 203 RTLQGEGGYLKKVEFHS-----------GLRIERAGGFIVPTFFRP 237 (304)
T ss_dssp EEEESGGGCCCEEEETT-----------SCEECCCEEEECCEEECS
T ss_pred EEeecCCCeeeeeeccc-----------cceeeecceeeeeccccC
Confidence 666554332 33222 137889999998886654
No 288
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.50 E-value=0.0016 Score=65.58 Aligned_cols=100 Identities=14% Similarity=0.131 Sum_probs=59.6
Q ss_pred CcEEEECCCHHH------HHHH----HhhccCC----CeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhc
Q 013546 110 PRVVVLGTGWGA------CRFL----KGIDTKI----YDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLS 175 (441)
Q Consensus 110 k~VvIIGgG~aG------l~aA----~~L~~~g----~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~ 175 (441)
++++|||+|+.| ++.| ..|.+.| .+|+++++.+++.... ..........+.+. +.
T Consensus 143 ~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~--------l~~~~~~~~~l~~~---l~ 211 (430)
T 3h28_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFG--------VGGIGASKRLVEDL---FA 211 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTT--------TTCSTTHHHHHHHH---HH
T ss_pred CCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccc--------cCcchHHHHHHHHH---HH
Confidence 357889987643 6666 4555566 5899999987653110 00111122222222 22
Q ss_pred CCCCEEEEE-EEEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcC
Q 013546 176 SDPNSYFYL-ASCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPL 230 (441)
Q Consensus 176 ~~~~v~~~~-~~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~ 230 (441)
..+++++. ..|++|+. +.+.+++.. ++..++++|.+++|+|..++
T Consensus 212 -~~GV~i~~~~~v~~v~~--~~v~~~~~~-------~~g~~i~~D~vv~a~G~~~~ 257 (430)
T 3h28_A 212 -ERNIDWIANVAVKAIEP--DKVIYEDLN-------GNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp -HTTCEEECSCEEEEECS--SEEEEECTT-------SCEEEEECSEEEEECEEECC
T ss_pred -HCCCEEEeCCEEEEEeC--CeEEEEecC-------CCceEEeeeEEEECCCCccc
Confidence 34777765 47888865 346665522 12357899999999997764
No 289
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.45 E-value=0.0018 Score=69.00 Aligned_cols=33 Identities=9% Similarity=0.260 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHhhc---c-CCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGID---T-KIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~---~-~g~~Vtvie~~~ 142 (441)
.+|+|||||+||+++|..|+ + .|.+|+|+|+.+
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 48999999999999999999 6 899999999986
No 290
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.44 E-value=0.0027 Score=54.49 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|+|+|..|..+|..|.+.|++|+++++++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5689999999999999999999999999999875
No 291
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.38 E-value=0.002 Score=64.27 Aligned_cols=82 Identities=12% Similarity=0.043 Sum_probs=49.7
Q ss_pred HHHHHHH----hhccCC----CeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EEEEE
Q 013546 120 GACRFLK----GIDTKI----YDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SCIGI 190 (441)
Q Consensus 120 aGl~aA~----~L~~~g----~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i 190 (441)
+|+++|. .|.+.| .+|+++++.+ .. + ... ......+.+. + +..+++++.+ .++++
T Consensus 181 ~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l--~--------~~~-~~~~~~~~~~---l-~~~gV~~~~~~~v~~i 244 (409)
T 3h8l_A 181 PVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YL--S--------DLS-PNSRKAVASI---Y-NQLGIKLVHNFKIKEI 244 (409)
T ss_dssp HHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SS--T--------TBC-HHHHHHHHHH---H-HHHTCEEECSCCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cc--c--------ccC-HHHHHHHHHH---H-HHCCCEEEcCCceEEE
Confidence 5777774 455667 4999999887 22 1 111 1111222222 2 2346777764 68888
Q ss_pred eCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcC
Q 013546 191 DTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPL 230 (441)
Q Consensus 191 d~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~ 230 (441)
+.+ .+.++++ .++++|.||+|+|..|+
T Consensus 245 ~~~--~v~~~~g-----------~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 245 REH--EIVDEKG-----------NTIPADITILLPPYTGN 271 (409)
T ss_dssp CSS--EEEETTS-----------CEEECSEEEEECCEECC
T ss_pred CCC--eEEECCC-----------CEEeeeEEEECCCCCcc
Confidence 653 4555432 37899999999998775
No 292
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.38 E-value=0.002 Score=67.20 Aligned_cols=35 Identities=9% Similarity=0.086 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..+++|||+|++|+.+|.+|++.|++|+|+|+.+.
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred ceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 46899999999999999999999999999999864
No 293
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.36 E-value=0.0038 Score=52.63 Aligned_cols=34 Identities=12% Similarity=0.059 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+|+|+|.|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 5689999999999999999999999999999875
No 294
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.29 E-value=0.0034 Score=52.75 Aligned_cols=34 Identities=6% Similarity=0.203 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5689999999999999999999999999999864
No 295
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.29 E-value=0.0038 Score=53.35 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|+|+|+|..|...+..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5689999999999999999999999999999864
No 296
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.27 E-value=0.002 Score=68.84 Aligned_cols=44 Identities=11% Similarity=0.076 Sum_probs=35.4
Q ss_pred CCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Q 013546 297 EWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 297 ~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~l~ 348 (441)
..++| ++|++||+|||+... ....+..+..+|++++.++..++.
T Consensus 446 ~~~~t-~v~gl~a~Ge~~~~~-------~hg~~~~sl~~g~~ag~~a~~~~~ 489 (662)
T 3gyx_A 446 YNRMT-TVEGLWTCADGVGAS-------GHKFSSGSHAEGRIVGKQMVRWYL 489 (662)
T ss_dssp CTTBC-SSBTEECCSSSBCSC-------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-ccCCeEeCccccccc-------cCccHhHHHHHHHHHHHHHHHHHh
Confidence 67888 999999999998421 122377888899999999998886
No 297
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.04 E-value=0.005 Score=49.45 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC-CeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI-YDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g-~~Vtvie~~~ 142 (441)
+++|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 568999999999999999999999 9999998864
No 298
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.99 E-value=0.0059 Score=50.67 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999998864
No 299
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=95.76 E-value=0.0066 Score=62.63 Aligned_cols=35 Identities=11% Similarity=0.170 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHhhcc-CCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT-KIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~-~g~~Vtvie~~~~ 143 (441)
-.+++|||||+||+.+|.+|++ .+++|.|+|+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 3589999999999999999997 6899999998754
No 300
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.60 E-value=0.012 Score=60.58 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHhhcc--CCCeEEEEcCCCCc
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDT--KIYDAVCISPRNHM 144 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~--~g~~Vtvie~~~~~ 144 (441)
.+|||+|||+|-.|+..+..|++ .+.+|+++-+.+.+
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 47899999999999999999975 36899999987643
No 301
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.55 E-value=0.0091 Score=49.67 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|+|+|..|..+|..|.+.|++|+++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999998764
No 302
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.51 E-value=0.0071 Score=62.90 Aligned_cols=34 Identities=15% Similarity=0.342 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..+++|||||.||+.+|.+|++ |.+|.|+|+.+.
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 3589999999999999999999 999999999854
No 303
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.46 E-value=0.01 Score=61.21 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+++|||+|++|+.+|.+|++.|.+|.|+|+....
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 468999999999999999999999999999998743
No 304
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.42 E-value=0.012 Score=51.70 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccC-CCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK-IYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~-g~~Vtvie~~~ 142 (441)
+.+|+|+|.|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 56899999999999999999998 99999999875
No 305
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.40 E-value=0.014 Score=53.56 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPR 141 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~ 141 (441)
++++|+|||||..|...+..|.+.|.+|+||+++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3789999999999999999999999999999875
No 306
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.35 E-value=0.011 Score=60.95 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
..+++|||+|++|+.+|.+|++.|.+|+|+|+.++..
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 3589999999999999999999999999999987543
No 307
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.16 E-value=0.015 Score=60.96 Aligned_cols=35 Identities=9% Similarity=0.079 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC-CeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI-YDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g-~~Vtvie~~~~ 143 (441)
..++||||||.||+.+|.+|++.+ ++|.|+|+.+.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 358999999999999999999887 79999999875
No 308
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.08 E-value=0.019 Score=54.33 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+.++|+|||+|..|...|..|++.|++|+++|+++.
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 357999999999999999999999999999998763
No 309
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.95 E-value=0.013 Score=55.48 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|||||-.|...+..|.+.|++||||+++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 6799999999999999999999999999998764
No 310
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.85 E-value=0.015 Score=58.73 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+++|+|||.|.+|+++|+.|.+.|++|+++|.++.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 57899999999999999999999999999998763
No 311
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=94.73 E-value=0.023 Score=59.15 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccC-CCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK-IYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~-g~~Vtvie~~~~ 143 (441)
..+++|||+|++|+.+|.+|++. |.+|.|+|+.+.
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 45899999999999999999997 899999999854
No 312
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.66 E-value=0.024 Score=57.58 Aligned_cols=35 Identities=14% Similarity=0.035 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++++|.|||.|.+|+++|+.|.+.|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 36899999999999999999999999999999865
No 313
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.66 E-value=0.03 Score=53.45 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999875
No 314
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=94.62 E-value=0.024 Score=59.44 Aligned_cols=34 Identities=9% Similarity=0.117 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHhhcc-CCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT-KIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~-~g~~Vtvie~~~ 142 (441)
..++||||||.||+.+|.+|++ .+++|.|+|+.+
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4689999999999999999996 589999999987
No 315
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=94.61 E-value=0.024 Score=59.55 Aligned_cols=36 Identities=8% Similarity=0.040 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHhhcc-CCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDT-KIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~-~g~~Vtvie~~~~~ 144 (441)
..+++|||+|++|+.+|.+|++ .|.+|.|+|+....
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 3589999999999999999999 79999999998654
No 316
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.61 E-value=0.028 Score=53.93 Aligned_cols=37 Identities=11% Similarity=-0.015 Sum_probs=33.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..++++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3445799999999999999999999999999998875
No 317
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.58 E-value=0.028 Score=47.31 Aligned_cols=34 Identities=12% Similarity=0.172 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|+|||+|..|...+..|...|++|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5699999999999999999999999999998864
No 318
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.54 E-value=0.036 Score=49.85 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=35.4
Q ss_pred CCCcccCCCCCEEEecccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Q 013546 296 DEWLRAPSVEDVFALGDCAGFLEQTGKPVLPALAQVAERQGKYLAELFNKKIG 348 (441)
Q Consensus 296 d~~lqt~~~~~VfA~GD~a~~~~~~G~~~~p~~a~~A~~qg~~aA~nI~~~l~ 348 (441)
++.+++ +.++||++||++ .| ..+..|+..|+.||+.|.+.|+
T Consensus 287 ~~~~~~-~~~~v~l~GDa~-----~g-----~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 287 WGALSD-ADLGIYVCGDWC-----LS-----GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp CSSEEE-TTTTEEECCGGG-----TT-----SSHHHHHHHHHHHHHHHHHHTT
T ss_pred ccceee-CCCCEEEEeccc-----CC-----cCHHHHHHHHHHHHHHHHHHhh
Confidence 456677 789999999997 23 3588999999999999999996
No 319
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=94.29 E-value=0.02 Score=59.92 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHhhcc-CCCeEEEEcCCCCc
Q 013546 110 PRVVVLGTGWGACRFLKGIDT-KIYDAVCISPRNHM 144 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~-~g~~Vtvie~~~~~ 144 (441)
.+++|||||.||+.+|.+|++ .+++|.|+|+.+..
T Consensus 3 yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 3 FDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp EEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred cCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 479999999999999999998 78999999997643
No 320
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.24 E-value=0.035 Score=50.51 Aligned_cols=37 Identities=24% Similarity=0.224 Sum_probs=31.6
Q ss_pred CCCCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 106 PGEKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 106 ~~~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..++++|+|.|| |..|..++..|.+.|++|+++.+++
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 345789999998 9999999999999999999998864
No 321
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.20 E-value=0.039 Score=54.95 Aligned_cols=34 Identities=12% Similarity=0.117 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+.+|+|||+|.+|+.+|+.+...|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5799999999999999999999999999999876
No 322
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.15 E-value=0.041 Score=51.65 Aligned_cols=35 Identities=6% Similarity=0.137 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+++|+|.|+|+.|..++..|.+.|++|+++.++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 56899999999999999999999999999998753
No 323
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.14 E-value=0.038 Score=53.74 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+.||+|||+|..|...|..|.+.|++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4589999999999999999999999999998764
No 324
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.12 E-value=0.033 Score=50.41 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 79999999999999999999999999999875
No 325
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.09 E-value=0.04 Score=53.12 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+||+|||+|..|...|..|++.|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999998864
No 326
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.01 E-value=0.045 Score=53.18 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~ 143 (441)
+.||+|||+|..|..+|..|+..|+ +|+++|.++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4589999999999999999999888 9999998763
No 327
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.97 E-value=0.043 Score=55.43 Aligned_cols=37 Identities=16% Similarity=0.106 Sum_probs=33.3
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..+.+|.|||.||.|+..|..|++.|++|+.||-++.
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 3467999999999999999999999999999998763
No 328
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.84 E-value=0.046 Score=51.93 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 489999999999999999999999999998764
No 329
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.82 E-value=0.038 Score=54.62 Aligned_cols=34 Identities=18% Similarity=0.122 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+.+|+|||+|.+|+.+|+.+...|.+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6799999999999999999999999999999875
No 330
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.72 E-value=0.051 Score=52.57 Aligned_cols=34 Identities=6% Similarity=0.047 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHH-HHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACR-FLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~-aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|.|||.|.+|++ +|..|.++|++|++.|.++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 679999999999997 7889999999999999875
No 331
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.72 E-value=0.051 Score=52.12 Aligned_cols=34 Identities=12% Similarity=0.112 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
+.||+|||+|..|..+|..|...|+ +|+++++++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4589999999999999999999998 999999864
No 332
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=93.70 E-value=0.051 Score=54.56 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=31.4
Q ss_pred CCCEEEEEE-EEEEEeCCCCEEEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcC
Q 013546 177 DPNSYFYLA-SCIGIDTDKHEVYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPL 230 (441)
Q Consensus 177 ~~~v~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~ 230 (441)
..+++++.+ .|++++. +.+.+++.+ ++.+++++|.+++++|.+|+
T Consensus 212 ~~GV~~~~~~~v~~v~~--~~~~~~~~~-------g~~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 212 ERNIDWIANVAVKAIEP--DKVIYEDLN-------GNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HTTCEEECSCEEEEECS--SEEEEECTT-------SCEEEEECSEEEEECEEECC
T ss_pred hCCeEEEeCceEEEEeC--CceEEEeeC-------CCceEeecceEEEeccCCCc
Confidence 357777665 7888865 456665532 23358999999999998764
No 333
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.69 E-value=0.049 Score=51.87 Aligned_cols=34 Identities=9% Similarity=-0.016 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998876
No 334
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.69 E-value=0.05 Score=52.78 Aligned_cols=33 Identities=9% Similarity=0.031 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPR 141 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~ 141 (441)
.+||+|||+|..|...|..|++.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 458999999999999999999999999999874
No 335
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.69 E-value=0.054 Score=50.66 Aligned_cols=34 Identities=12% Similarity=0.236 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|.|+|+.|..++..|.+.|++|+++.+++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999998875
No 336
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.69 E-value=0.06 Score=48.51 Aligned_cols=35 Identities=6% Similarity=0.106 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+++|.|||+|..|...|..|.+.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 56899999999999999999999999999998764
No 337
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.67 E-value=0.041 Score=53.16 Aligned_cols=35 Identities=9% Similarity=0.086 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..+|+|||+|..|...|..++..|++|+++|.++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998764
No 338
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.66 E-value=0.056 Score=52.82 Aligned_cols=35 Identities=6% Similarity=-0.025 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+|+|+|||||.-|..++..+.+.|++|+++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 57999999999999999999999999999998764
No 339
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.66 E-value=0.052 Score=55.10 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.||.|||.|+.|+..|..|++.|++|+++++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 489999999999999999999999999999876
No 340
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.65 E-value=0.059 Score=52.88 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+.||.|||+|.-|...|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 341
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.59 E-value=0.051 Score=52.49 Aligned_cols=35 Identities=9% Similarity=0.086 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 56899999999999999999999999999998863
No 342
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.39 E-value=0.061 Score=53.69 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|||+|.+|+.++..+...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 6799999999999999999999999999998875
No 343
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.28 E-value=0.048 Score=52.34 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+||+|||+|-.|...|..|.+.|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999998864
No 344
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.28 E-value=0.072 Score=52.82 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+++|+|+|+|.+|+.++..+...|.+|+++|+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36799999999999999999999999999999875
No 345
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.28 E-value=0.079 Score=46.60 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=30.7
Q ss_pred CcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++|+|.|| |..|..++..|.+.|++|+++.+++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999998 9999999999999999999998865
No 346
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.19 E-value=0.071 Score=47.97 Aligned_cols=34 Identities=12% Similarity=0.343 Sum_probs=31.2
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|.|| |+.|..++..|.+.|++|+++.+++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 468999995 9999999999999999999998875
No 347
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.18 E-value=0.071 Score=52.36 Aligned_cols=37 Identities=8% Similarity=0.060 Sum_probs=31.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++++++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4446799999999999999999999999999998875
No 348
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.12 E-value=0.07 Score=51.36 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
++||+|||+|..|...|..|+..|+ +|+++|.++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999898 999999876
No 349
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.11 E-value=0.065 Score=54.54 Aligned_cols=33 Identities=12% Similarity=0.242 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.||+|+|+|-.|...|+.|...|++|+|||+++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 489999999999999999999999999999875
No 350
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.09 E-value=0.079 Score=49.69 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
||.|||+|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 79999999999999999999999999998875
No 351
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.06 E-value=0.063 Score=52.62 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999998865
No 352
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.05 E-value=0.082 Score=48.82 Aligned_cols=35 Identities=14% Similarity=0.084 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 46799999999999999999999999999999875
No 353
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.00 E-value=0.078 Score=54.19 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..||.|||.|+.|+..|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4589999999999999999999999999999875
No 354
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.96 E-value=0.071 Score=54.45 Aligned_cols=35 Identities=11% Similarity=0.157 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccC-CC-eEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK-IY-DAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~-g~-~Vtvie~~~~ 143 (441)
.+||.|||.|+.|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 45899999999999999999999 99 9999999875
No 355
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.95 E-value=0.078 Score=47.92 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999998764
No 356
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.95 E-value=0.083 Score=50.39 Aligned_cols=34 Identities=9% Similarity=-0.108 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999998765
No 357
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.90 E-value=0.078 Score=53.69 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
.-|++|||.|+.|+..|..|++.|++|+++++++.-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 458999999999999999999999999999998743
No 358
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.87 E-value=0.13 Score=52.08 Aligned_cols=37 Identities=8% Similarity=0.034 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+..++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3457999999999999999999999999999999864
No 359
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.78 E-value=0.094 Score=52.79 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..+|.|||.|+.|+..|..|++ |++|+++|+++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 4589999999999999999998 999999998763
No 360
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.76 E-value=0.097 Score=50.65 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=31.7
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
+++.||+|||+|..|.++|..|+..|+ +|+++|.++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 346799999999999999999998888 999999876
No 361
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.73 E-value=0.079 Score=53.83 Aligned_cols=34 Identities=12% Similarity=-0.092 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|||+|..|...+..|.+.|.+|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 6799999999999999999999999999999863
No 362
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.69 E-value=0.081 Score=50.94 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=30.4
Q ss_pred CCCCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 106 PGEKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 106 ~~~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..++++|+|.|| |+.|..++..|.+.|++|+++++.+
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 344679999998 9999999999999999999998875
No 363
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.68 E-value=0.1 Score=50.26 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=31.7
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPR 141 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~ 141 (441)
++.+||+|||+|..|..+|..|+..|+ +|+++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 345799999999999999999999999 99999987
No 364
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.64 E-value=0.12 Score=52.57 Aligned_cols=36 Identities=17% Similarity=0.052 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+..++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 35 ~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 35 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 345689999999999999999999999999999876
No 365
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.62 E-value=0.072 Score=51.16 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPR 141 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~ 141 (441)
+++|.|||.|..|...|..|.+.|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 5689999999999999999999999 99999886
No 366
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.62 E-value=0.1 Score=50.50 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~~ 143 (441)
++||+|||+|..|...|..|+..|+ +|+++|.++.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 4589999999999999999999998 9999998763
No 367
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.61 E-value=0.095 Score=50.72 Aligned_cols=35 Identities=20% Similarity=0.215 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++.||.|||+|..|...|..|.+.|++|+++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 46699999999999999999999999999998864
No 368
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.60 E-value=0.1 Score=51.31 Aligned_cols=34 Identities=18% Similarity=-0.007 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|+|+|.+|..++..+...|.+|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4799999999999999999999999999998864
No 369
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.58 E-value=0.1 Score=51.44 Aligned_cols=34 Identities=18% Similarity=0.033 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|+|+|.+|..+|+.+...|++|+++++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5799999999999999999999999999998764
No 370
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.51 E-value=0.097 Score=49.42 Aligned_cols=33 Identities=9% Similarity=0.043 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 489999999999999999999999999998875
No 371
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.51 E-value=0.11 Score=49.66 Aligned_cols=34 Identities=9% Similarity=0.058 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|.|||+|..|...|..|.+.|++|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999998764
No 372
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.51 E-value=0.11 Score=50.07 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
++||+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4589999999999999999999888 999999875
No 373
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.48 E-value=0.053 Score=49.26 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEE-EcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVC-ISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtv-ie~~~ 142 (441)
+.||.|||+|..|...|..|.+.|++|++ +++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 56899999999999999999999999999 77654
No 374
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=92.45 E-value=0.11 Score=54.95 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=35.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
..+|+|||+|..|..+|..|++.|.+|.+||++++.+
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYG 44 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCccc
Confidence 5799999999999999999999999999999999875
No 375
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.41 E-value=0.084 Score=50.18 Aligned_cols=34 Identities=9% Similarity=0.066 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999998764
No 376
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.34 E-value=0.18 Score=51.48 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=15.5
Q ss_pred eeeCCEEEEcCCCCcCC
Q 013546 215 KVAYDKLVIAAGAEPLT 231 (441)
Q Consensus 215 ~i~yD~LvlAtGs~p~~ 231 (441)
++++|.||+|+|.+|+.
T Consensus 299 ~i~aD~Vv~a~G~~p~~ 315 (493)
T 1y56_A 299 EYKVDALIFADGRRPDI 315 (493)
T ss_dssp EEECSEEEECCCEEECC
T ss_pred EEEeCEEEECCCcCcCc
Confidence 78999999999998875
No 377
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.28 E-value=0.15 Score=48.77 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=32.9
Q ss_pred CCCCCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 105 KPGEKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 105 ~~~~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+..++++|+|.|| |+.|..++..|.+.|++|+++++..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3344678999998 9999999999999999999998854
No 378
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.26 E-value=0.12 Score=51.18 Aligned_cols=35 Identities=17% Similarity=0.119 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+++|+|||+|.+|..+|+.+...|.+|+++++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 46899999999999999999999999999998764
No 379
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.25 E-value=0.097 Score=50.39 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5689999999999999999999999999998764
No 380
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.17 E-value=0.07 Score=50.70 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.||+|||+|-.|...|..|.+.|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999874
No 381
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=92.15 E-value=0.11 Score=47.37 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=31.6
Q ss_pred CCCCcEEEEC-CCHHHHHHHHhhccCC-CeEEEEcCCC
Q 013546 107 GEKPRVVVLG-TGWGACRFLKGIDTKI-YDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIG-gG~aGl~aA~~L~~~g-~~Vtvie~~~ 142 (441)
+++++|+|.| +|..|..++..|.+.| ++|+++.+++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 4467899999 5999999999999999 8999998875
No 382
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.12 E-value=0.13 Score=49.19 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+.||+|||+|-.|...|..|. .|++|+++++++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 358999999999999999999 999999998865
No 383
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.10 E-value=0.069 Score=50.45 Aligned_cols=33 Identities=12% Similarity=0.068 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999998875
No 384
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.99 E-value=0.15 Score=48.67 Aligned_cols=34 Identities=12% Similarity=-0.033 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999998865
No 385
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.96 E-value=0.088 Score=48.01 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|+|+|+|..|...|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 5689999999999999999999999 99998765
No 386
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.95 E-value=0.12 Score=49.77 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC-CeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI-YDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g-~~Vtvie~~~ 142 (441)
.++|.|||.|..|...|..|.+.| ++|+++++++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999998875
No 387
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=91.95 E-value=0.17 Score=45.38 Aligned_cols=34 Identities=12% Similarity=0.015 Sum_probs=30.4
Q ss_pred CCcEEEECC-CHHHHHHHHhhc-cCCCeEEEEcCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGID-TKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~-~~g~~Vtvie~~~ 142 (441)
+|+|+|.|| |..|..++..|. +.|++|+++.+++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 466999995 999999999999 8999999998874
No 388
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.93 E-value=0.14 Score=48.07 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++++|+|+|-+|..+|..|.+.|.+|++++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 6799999999999999999999999999998763
No 389
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.92 E-value=0.14 Score=51.13 Aligned_cols=31 Identities=10% Similarity=0.133 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+|.|||.|+.|+..|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 79999999999999999999 99999999875
No 390
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.88 E-value=0.093 Score=53.41 Aligned_cols=34 Identities=9% Similarity=0.126 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~ 142 (441)
.++|.|||.|+.|+..|..|++. |++|+++++++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 35899999999999999999988 89999999875
No 391
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.82 E-value=0.19 Score=47.81 Aligned_cols=34 Identities=15% Similarity=0.227 Sum_probs=31.4
Q ss_pred CCcEEEEC-CCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLG-TGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIG-gG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|.||| .|..|.+.|..|.+.|++|+++++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 46899999 99999999999999999999998875
No 392
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.79 E-value=0.13 Score=49.40 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=29.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++||+|||+|..|...|..|++.|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 568999999999999999999999999999 553
No 393
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.77 E-value=0.11 Score=48.18 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
.++|+|||+|-.|..+|..|++.|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999997 899999874
No 394
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.75 E-value=0.1 Score=52.59 Aligned_cols=32 Identities=9% Similarity=0.260 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+|.|||.|+.|+..|..|++.|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999875
No 395
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.73 E-value=0.15 Score=48.58 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.|+|.|||+|..|-..|..|+ .|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 679999999999999999999 999999999876
No 396
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.64 E-value=0.11 Score=53.02 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccC--CCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTK--IYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~ 142 (441)
+.+|.|||.|+.|+..|..|++. |++|+++++++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 45899999999999999999987 79999999865
No 397
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.59 E-value=0.15 Score=48.52 Aligned_cols=35 Identities=14% Similarity=0.113 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+++|.|||.|.+|..+|+.|...|++|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 36799999999999999999999999999998764
No 398
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.55 E-value=0.16 Score=48.25 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+++|.|||.|.+|..+|+.|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36899999999999999999999999999998764
No 399
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=91.50 E-value=0.15 Score=47.92 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=30.1
Q ss_pred cEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
||+|.|| |+.|-.++..|.+.||+|+++.|++
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 7999998 9999999999999999999998865
No 400
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=91.48 E-value=0.14 Score=49.41 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=31.0
Q ss_pred CCCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 107 GEKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
|.+++|+|.|| |+.|...+..|.+.|++|+++.+++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 33578999998 9999999999999999999999875
No 401
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.45 E-value=0.17 Score=47.48 Aligned_cols=34 Identities=12% Similarity=0.172 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++++|||+|-+|..++..|.+.|.+|+|++|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6799999999999999999999999999998864
No 402
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.41 E-value=0.16 Score=48.06 Aligned_cols=35 Identities=11% Similarity=0.218 Sum_probs=32.2
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+++|+|.|| |+.|..++..|.+.|++|+++++.+.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 679999998 99999999999999999999988764
No 403
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.41 E-value=0.16 Score=48.88 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
+.||+|||+|..|..+|..|...++ +|+++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999998887 999999765
No 404
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.40 E-value=0.13 Score=48.75 Aligned_cols=34 Identities=6% Similarity=-0.040 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+.+|.|||.|..|...|..|.+.|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4589999999999999999999999999998764
No 405
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.39 E-value=0.17 Score=48.56 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
+||+|||+|..|...|..|+..|+ +|+++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999998886 999999765
No 406
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=91.35 E-value=0.21 Score=47.64 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=32.0
Q ss_pred CCCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 107 GEKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++++|+|.|| |+.|..++..|.+.|++|+++.++.
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 34679999998 9999999999999999999998764
No 407
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=91.35 E-value=0.2 Score=49.45 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.+++|+|||+|..|..+++.+.+.|++|+++++.+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 467999999999999999999999999999988653
No 408
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.32 E-value=0.18 Score=44.86 Aligned_cols=32 Identities=16% Similarity=0.349 Sum_probs=29.7
Q ss_pred cEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
||+|.|| |..|..++..|.+.|++|+++.+++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999998875
No 409
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.25 E-value=0.16 Score=48.96 Aligned_cols=36 Identities=22% Similarity=0.160 Sum_probs=30.9
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCC----CeEEEEcCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKI----YDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g----~~Vtvie~~~ 142 (441)
++..+|.|||+|..|...|..|.+.| ++|+++++++
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 34458999999999999999999998 8999998875
No 410
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=91.25 E-value=0.18 Score=48.21 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=31.8
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+++|+|.|| |+.|..++..|.+.|++|++++++..
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 568999998 99999999999999999999988753
No 411
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.25 E-value=0.16 Score=48.50 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
||+|||+|..|...|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999998 999999875
No 412
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.21 E-value=0.092 Score=51.04 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC-------CeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI-------YDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g-------~~Vtvie~~~~ 143 (441)
++||+|||+|..|...|..|++.| ++|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 458999999999999999999888 99999998764
No 413
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.20 E-value=0.16 Score=50.88 Aligned_cols=35 Identities=14% Similarity=0.008 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..+|+|+|.|..|..+|..|.+.|++|++||.++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45899999999999999999999999999998863
No 414
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.16 E-value=0.22 Score=46.88 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=31.0
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|.|||+ |..|...|..|.+.|++|+++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 358999999 9999999999999999999998764
No 415
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.15 E-value=0.19 Score=44.77 Aligned_cols=32 Identities=31% Similarity=0.210 Sum_probs=29.8
Q ss_pred cEEEEC-CCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLG-TGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIG-gG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
||+||| +|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 799999 99999999999999999999998864
No 416
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.15 E-value=0.2 Score=47.75 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
.++|+|||+|.+|..+|..|.+.|+ +|+|+++..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 6799999999999999999999997 999998764
No 417
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.10 E-value=0.21 Score=48.28 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
.+||+|||+|..|.++|..|...++ +|+++|.++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 5689999999999999999988777 999999876
No 418
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.04 E-value=0.18 Score=51.26 Aligned_cols=35 Identities=11% Similarity=-0.050 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+++|+|+|+|.+|..+|..|+..|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 47899999999999999999999999999998764
No 419
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.99 E-value=0.29 Score=52.66 Aligned_cols=36 Identities=11% Similarity=0.191 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
..++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 457899999999999999999999999999998763
No 420
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.97 E-value=0.23 Score=47.75 Aligned_cols=34 Identities=15% Similarity=0.257 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
.++|.|||.|..|.+.|..|.+.|+ +|+++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 999998875
No 421
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=90.86 E-value=0.21 Score=53.09 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHhhccC------CCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK------IYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~------g~~Vtvie~~~ 142 (441)
.+|+|||||.||+++|..|++. |.+|+|+|+..
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 5899999999999999999987 99999999964
No 422
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=90.84 E-value=0.17 Score=50.69 Aligned_cols=35 Identities=14% Similarity=-0.064 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+++|+|+|.|.+|..+|..|...|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 47899999999999999999999999999998765
No 423
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.78 E-value=0.19 Score=48.70 Aligned_cols=34 Identities=15% Similarity=0.279 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
+.||+|||+|..|.++|..|...|+ +|+++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 5689999999999999999988776 899998864
No 424
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=90.67 E-value=0.29 Score=52.03 Aligned_cols=34 Identities=18% Similarity=0.150 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.+|+|||||.||+++|..|++.|.+|+|+|+.+.
T Consensus 6 ~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp CSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred ccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 4799999999999999999999999999999753
No 425
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=90.66 E-value=0.25 Score=49.48 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=32.9
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+.+++|+|||+|..|..++..+.+.|++|.++++.+.
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 3468999999999999999999999999999987653
No 426
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=90.63 E-value=0.28 Score=50.82 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHM 144 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~ 144 (441)
..+|+|||||+||+++|..|++ |.+|+|+|+.+..
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 3589999999999999999999 9999999998643
No 427
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.63 E-value=0.22 Score=47.70 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHhhccC--CCeEEEEcCCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTK--IYDAVCISPRNH 143 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~--g~~Vtvie~~~~ 143 (441)
||+|||+|..|...|..|+.. |++|+++|.++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 799999999999999999874 799999998763
No 428
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.63 E-value=0.19 Score=51.42 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=31.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+.+++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3457799999999999999999999999999998864
No 429
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.62 E-value=0.16 Score=47.72 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++++|+|+|-+|..+|..|.+.|.+|+|++++.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 6799999999999999999999999999998864
No 430
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.61 E-value=0.2 Score=49.54 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPR 141 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~ 141 (441)
..||||+|+|.||+.+|+.|...|. +|+++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 5699999999999999999998898 99999987
No 431
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.59 E-value=0.22 Score=46.57 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
++|.|||+|..|...|..|.+.|+ +|+++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999999998 899998764
No 432
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.58 E-value=0.17 Score=47.48 Aligned_cols=32 Identities=9% Similarity=0.127 Sum_probs=29.3
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++|.|||+|..|...|..|.+ |++|+++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 379999999999999999999 99999998765
No 433
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=90.58 E-value=0.21 Score=47.20 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=29.1
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|.|| |+.|..++..|.+.|++|++++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 468999998 9999999999999999999998654
No 434
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.53 E-value=0.13 Score=48.92 Aligned_cols=31 Identities=13% Similarity=0.122 Sum_probs=28.9
Q ss_pred CcEEEECCCHHHHHHHHhhccC-----C-CeEEEEcC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTK-----I-YDAVCISP 140 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~-----g-~~Vtvie~ 140 (441)
.||.|||+|..|...|..|.+. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4899999999999999999988 9 99999987
No 435
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.44 E-value=0.21 Score=51.00 Aligned_cols=35 Identities=11% Similarity=0.057 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.++|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 56899999999999999999999999999998763
No 436
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.36 E-value=0.25 Score=50.55 Aligned_cols=35 Identities=9% Similarity=-0.021 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+++|+|||.|..|..+|+.+...|++|+++|+++
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 37899999999999999999999999999998764
No 437
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.34 E-value=0.24 Score=44.22 Aligned_cols=32 Identities=13% Similarity=0.287 Sum_probs=29.7
Q ss_pred cEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
||+|.|| |..|..++..|.+.|++|+++.+++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 6999998 9999999999999999999998864
No 438
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=90.31 E-value=0.31 Score=47.81 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
++++|+|+|+|..|...+..+.+.|++|++++..+.
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 467999999999999999999999999999987653
No 439
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=90.29 E-value=0.26 Score=48.76 Aligned_cols=37 Identities=19% Similarity=0.137 Sum_probs=33.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCCcc
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNHMV 145 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~~~ 145 (441)
+.+++|+|+|+.+..+|..++..|++|||+|.++.+.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~ 240 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA 240 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc
Confidence 4599999999999999999999999999999987643
No 440
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=90.23 E-value=0.19 Score=46.38 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCC----CeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKI----YDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g----~~Vtvie~~~~ 143 (441)
+.+|.|||+|-.|...|..|.+.| ++|+++++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 348999999999999999999888 79999988763
No 441
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=90.20 E-value=0.29 Score=46.80 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=31.8
Q ss_pred CCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 108 EKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 108 ~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
++++|+|.|| |+.|..++..|.+.|++|+++++...
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 3578999995 99999999999999999999988653
No 442
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.20 E-value=0.29 Score=45.22 Aligned_cols=34 Identities=15% Similarity=0.249 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+.+|.|||.|..|...|..|.+.|++|+++++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 3589999999999999999999999999998764
No 443
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=90.17 E-value=0.42 Score=46.95 Aligned_cols=85 Identities=5% Similarity=-0.051 Sum_probs=45.0
Q ss_pred HHHHHhhcc--CCCeEEEEcCCCCcccccchhhhhcCCCCccccccchhhhhhhhcCCCCEEEEEE-EE--EEEeCCCCE
Q 013546 122 CRFLKGIDT--KIYDAVCISPRNHMVFTPLLASTCVGTLEFRSVAEPVSRIQTSLSSDPNSYFYLA-SC--IGIDTDKHE 196 (441)
Q Consensus 122 l~aA~~L~~--~g~~Vtvie~~~~~~~~~ll~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v--~~id~~~~~ 196 (441)
+.+|..|++ .+.+|++++..+.+.-.+.+.. .+.+......+..+++++.+ .+ ...+.+...
T Consensus 170 ~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~ 236 (401)
T 3vrd_B 170 SQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTK-------------GWERLYGFGTENALIEWHPGPDAAVVKTDTEAMT 236 (401)
T ss_dssp HHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHH-------------HHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTE
T ss_pred HHHHHHHHhcCCCCEEEEEcccccccccccccH-------------HHHHHHHHHHHhcCcEEEeCceEEEEEecccceE
Confidence 344555544 3478999998876531111110 11111111223456666543 22 333444455
Q ss_pred EEEEecCCCCCCCCCCcceeeCCEEEEcCCCCcC
Q 013546 197 VYCETVNNGKLSHEPHQFKVAYDKLVIAAGAEPL 230 (441)
Q Consensus 197 v~~~~~~~~~~~~~~~~~~i~yD~LvlAtGs~p~ 230 (441)
+.+.++ ++++||.|++++|.+|+
T Consensus 237 v~~~~g-----------~~i~~D~vi~~~g~~~~ 259 (401)
T 3vrd_B 237 VETSFG-----------ETFKAAVINLIPPQRAG 259 (401)
T ss_dssp EEETTS-----------CEEECSEEEECCCEEEC
T ss_pred EEcCCC-----------cEEEeeEEEEecCcCCc
Confidence 554432 37899999999997764
No 444
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=90.13 E-value=0.25 Score=44.93 Aligned_cols=33 Identities=6% Similarity=0.005 Sum_probs=30.3
Q ss_pred CcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
|+|+|.|| |..|.+++..|.+.|++|++++++.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 57999997 9999999999999999999998875
No 445
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.13 E-value=0.3 Score=48.06 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.+++|.|||+|..|..+++.+.+.|++|+++++.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 367999999999999999999999999999998754
No 446
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.12 E-value=0.23 Score=48.93 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPR 141 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~ 141 (441)
..||+|+|+|-+|..+|+.|...|. +|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5699999999999999999998888 89999987
No 447
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.08 E-value=0.25 Score=46.52 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC---eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY---DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~---~Vtvie~~~ 142 (441)
+++|.|||+|-.|...|..|.+.|+ +|+++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4689999999999999999999998 999998875
No 448
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=90.03 E-value=0.27 Score=46.93 Aligned_cols=34 Identities=24% Similarity=0.206 Sum_probs=30.8
Q ss_pred CcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 110 PRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 110 k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
.+|+|.|| |+.|..++..|.+.|++|+++++++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 48 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSS 48 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChH
Confidence 48999996 99999999999999999999998753
No 449
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.03 E-value=0.34 Score=45.03 Aligned_cols=36 Identities=8% Similarity=-0.184 Sum_probs=31.3
Q ss_pred CCCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 107 GEKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++++|+|.|| |..|.++|..|.+.|++|++++++.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 65 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK 65 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH
Confidence 44678999986 7999999999999999999998764
No 450
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.01 E-value=0.19 Score=48.28 Aligned_cols=30 Identities=13% Similarity=0.042 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISP 140 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~ 140 (441)
||.|||+|..|...|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 799999999999999999999999999988
No 451
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=89.98 E-value=0.22 Score=48.36 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=32.0
Q ss_pred CCCCcEEEECC-CHHHHHHHHhhccC-CCeEEEEcCCCC
Q 013546 107 GEKPRVVVLGT-GWGACRFLKGIDTK-IYDAVCISPRNH 143 (441)
Q Consensus 107 ~~~k~VvIIGg-G~aGl~aA~~L~~~-g~~Vtvie~~~~ 143 (441)
+++++|+|.|| |+.|..++..|.+. |++|+++++...
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 60 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTD 60 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChh
Confidence 44679999995 99999999999987 999999998763
No 452
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=89.92 E-value=0.22 Score=50.42 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++++|+|+|+|.+|...|..|.+.|++|++++++.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 35789999999999999999999999999998763
No 453
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.87 E-value=0.21 Score=49.51 Aligned_cols=31 Identities=19% Similarity=0.160 Sum_probs=28.2
Q ss_pred CcEEEECCCHHHHHHHHhhcc-CCCeEEEEcC
Q 013546 110 PRVVVLGTGWGACRFLKGIDT-KIYDAVCISP 140 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~-~g~~Vtvie~ 140 (441)
.||+|||+|..|...|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 489999999999999999988 5999999983
No 454
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.85 E-value=0.27 Score=47.19 Aligned_cols=35 Identities=9% Similarity=0.212 Sum_probs=31.1
Q ss_pred CCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++++|+|.|| |+.|..++..|.+.|++|+++++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678999998 9999999999999999999998754
No 455
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=89.82 E-value=0.32 Score=47.14 Aligned_cols=36 Identities=14% Similarity=0.082 Sum_probs=31.1
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
...+||+|||+|..|...|..|...|. +++++|.+.
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 346799999999999999999988776 899998764
No 456
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.81 E-value=0.21 Score=47.16 Aligned_cols=33 Identities=18% Similarity=0.118 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 489999999999999999999999999998764
No 457
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.77 E-value=0.3 Score=45.19 Aligned_cols=36 Identities=14% Similarity=-0.077 Sum_probs=31.6
Q ss_pred CCCCcEEEECC-CH-HHHHHHHhhccCCCeEEEEcCCC
Q 013546 107 GEKPRVVVLGT-GW-GACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGg-G~-aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++++++|.|| |. .|.++|+.|.+.|++|++++++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 34678999999 74 99999999999999999998764
No 458
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.74 E-value=0.22 Score=47.56 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHhhccCC--CeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKI--YDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g--~~Vtvie~~~ 142 (441)
+||+|||+|..|..+|..|...| ++|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 48999999999999999999888 7999999864
No 459
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.74 E-value=0.31 Score=47.25 Aligned_cols=36 Identities=11% Similarity=-0.032 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+++|.|||.|..|...|..|...|++|+++++..
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 346799999999999999999999999999998765
No 460
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=89.74 E-value=0.24 Score=49.70 Aligned_cols=35 Identities=11% Similarity=-0.103 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+++|+|||.|.+|..+|..|...|.+|+++|+++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 37899999999999999999999999999999865
No 461
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=89.70 E-value=0.26 Score=45.85 Aligned_cols=31 Identities=19% Similarity=0.371 Sum_probs=29.1
Q ss_pred cEEEECC-CHHHHHHHHhhccCCCeEEEEcCC
Q 013546 111 RVVVLGT-GWGACRFLKGIDTKIYDAVCISPR 141 (441)
Q Consensus 111 ~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~ 141 (441)
+|+|.|| |+.|..++..|.+.|++|+++.+.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK 38 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc
Confidence 8999996 999999999999999999999884
No 462
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.68 E-value=0.21 Score=50.27 Aligned_cols=35 Identities=11% Similarity=0.119 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+.++-|||.|+.|+.+|..|++.|++|+++|.++.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 56899999999999999999999999999999863
No 463
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.62 E-value=0.2 Score=47.24 Aligned_cols=34 Identities=9% Similarity=0.132 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
+++++|||+|-+|..+|..|.+.|. +|+|++|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 6799999999999999999999998 899998875
No 464
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=89.60 E-value=0.24 Score=49.75 Aligned_cols=35 Identities=11% Similarity=-0.110 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+++|+|||.|.+|..+|+.|...|.+|+++|+++
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999999999999999999999999998764
No 465
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=89.60 E-value=0.25 Score=46.43 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=31.1
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|.|| |..|..++..|.+.|++|+++.++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 568999997 9999999999999999999998875
No 466
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.56 E-value=0.29 Score=45.70 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999998764
No 467
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=89.55 E-value=0.38 Score=47.04 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=31.8
Q ss_pred CCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++++|+|.|| |+.|..++..|.+.|++|+++++..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 63 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK 63 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCC
Confidence 3578999998 9999999999999999999998875
No 468
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.54 E-value=0.19 Score=47.95 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=28.6
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+||.+||-|.-|...|..|.+.||+|+++++++
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999999876
No 469
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.54 E-value=0.3 Score=44.83 Aligned_cols=34 Identities=15% Similarity=0.290 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC----eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY----DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~----~Vtvie~~~ 142 (441)
++||.|||.|..|...|..|.+.|+ +|+++++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 3589999999999999999999998 999998865
No 470
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.53 E-value=0.3 Score=47.91 Aligned_cols=34 Identities=26% Similarity=0.135 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPR 141 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~ 141 (441)
.+++|+|+|.|..|..+|+.|.+.|++|++.|++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3689999999999999999999999999988754
No 471
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=89.47 E-value=0.4 Score=46.38 Aligned_cols=34 Identities=9% Similarity=-0.005 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
.+||+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 5799999999999999999988776 999998864
No 472
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.45 E-value=0.34 Score=45.67 Aligned_cols=34 Identities=21% Similarity=0.075 Sum_probs=31.1
Q ss_pred CCcEEEEC-CCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLG-TGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIG-gG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++++|+| +|.+|.++|..|.+.|++|++++++.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 67899999 89999999999999999999998763
No 473
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=89.44 E-value=0.31 Score=46.80 Aligned_cols=35 Identities=9% Similarity=0.091 Sum_probs=31.8
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+++|+|.|| |+.|..++..|.+.|++|+++.+...
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 679999996 99999999999999999999998653
No 474
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.39 E-value=0.19 Score=49.46 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHhhccCC-------CeEEEEcCCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKI-------YDAVCISPRNH 143 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g-------~~Vtvie~~~~ 143 (441)
+||.|||+|..|...|..|++.| ++|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999888 99999998764
No 475
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.37 E-value=0.35 Score=45.62 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++++|+|+|-+|.++|..|.+.| +|++++++.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 678999999999999999999999 999998763
No 476
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=89.37 E-value=0.26 Score=48.96 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=32.2
Q ss_pred CCCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 106 PGEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 106 ~~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++++++|+|+|||..|..++..+.+.|++|.+++ .+
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 3457899999999999999999999999999999 54
No 477
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.31 E-value=0.32 Score=46.80 Aligned_cols=34 Identities=9% Similarity=0.104 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
+++++|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 6799999999999999999999998 899998874
No 478
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=89.30 E-value=0.33 Score=46.95 Aligned_cols=36 Identities=11% Similarity=0.058 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+++|.|||.|..|...|..|...|++|++++++.
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 446799999999999999999999999999998764
No 479
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.30 E-value=0.28 Score=47.13 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=29.8
Q ss_pred CCCcEEEECCCHHHHHHHHhhccCC--CeEEEEcCCC
Q 013546 108 EKPRVVVLGTGWGACRFLKGIDTKI--YDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGgG~aGl~aA~~L~~~g--~~Vtvie~~~ 142 (441)
++.||+|||+|..|..+|..|...+ .+|+++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3569999999999999999998766 4899998753
No 480
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.29 E-value=0.31 Score=47.41 Aligned_cols=34 Identities=9% Similarity=0.148 Sum_probs=29.5
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCC--CeEEEEcCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKI--YDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g--~~Vtvie~~~ 142 (441)
++||+|||+ |..|.++|..+...| .+|+++|.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 568999997 999999999888777 4899998754
No 481
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.26 E-value=0.26 Score=47.16 Aligned_cols=34 Identities=18% Similarity=0.121 Sum_probs=29.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
++||+|||+|..|...|..|...|+ +|+|+|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999988888 999999876
No 482
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.25 E-value=0.32 Score=47.43 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=31.1
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|.|| |+.|..++..|.+.|++|+++.++.
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCC
Confidence 378999998 9999999999999999999998875
No 483
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=89.24 E-value=0.29 Score=50.02 Aligned_cols=34 Identities=3% Similarity=0.127 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999876
No 484
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.23 E-value=0.41 Score=45.26 Aligned_cols=36 Identities=14% Similarity=0.030 Sum_probs=31.5
Q ss_pred CCCCcEEEECCC---HHHHHHHHhhccCCCeEEEEcCCC
Q 013546 107 GEKPRVVVLGTG---WGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGgG---~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.++|+++|.||+ ..|.++|+.|++.|++|++++++.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 446889999985 899999999999999999998764
No 485
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=89.18 E-value=0.31 Score=44.49 Aligned_cols=37 Identities=3% Similarity=-0.085 Sum_probs=31.7
Q ss_pred CCCCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 106 PGEKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 106 ~~~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
...+++|+|.|| |..|.++|..|++.|++|++++++.
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 48 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE 48 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH
Confidence 345788999996 6899999999999999999998754
No 486
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.17 E-value=0.34 Score=45.79 Aligned_cols=34 Identities=15% Similarity=-0.009 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
.++++|+|+|-+|.+++..|.+.|. +|+|++|+.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 6799999999999999999999998 699998764
No 487
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=89.14 E-value=0.48 Score=45.88 Aligned_cols=36 Identities=14% Similarity=-0.067 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 107 GEKPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 107 ~~~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
..+++|.|||.|-.|...|..|...|++|+++++..
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 447899999999999999999999999999998765
No 488
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.03 E-value=0.31 Score=44.99 Aligned_cols=38 Identities=11% Similarity=-0.049 Sum_probs=32.4
Q ss_pred CCCCCCcEEEECC---CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 105 KPGEKPRVVVLGT---GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 105 ~~~~~k~VvIIGg---G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
...++|+|+|.|| |..|.++|+.|++.|++|+++.++.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 3445789999996 5899999999999999999998764
No 489
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=88.99 E-value=0.34 Score=47.50 Aligned_cols=33 Identities=9% Similarity=0.158 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++|+|||+|..|...+..+.+.|++|++++..+
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 689999999999999999999999999998864
No 490
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.99 E-value=0.3 Score=47.16 Aligned_cols=34 Identities=9% Similarity=0.129 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC--eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY--DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~--~Vtvie~~~ 142 (441)
++||+|||+|..|.++|..|...|+ +++++|.+.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 5699999999999999999988776 899998854
No 491
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.96 E-value=0.26 Score=46.45 Aligned_cols=32 Identities=16% Similarity=0.070 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+|.|||.|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998765
No 492
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=88.94 E-value=0.34 Score=45.14 Aligned_cols=38 Identities=11% Similarity=-0.033 Sum_probs=32.5
Q ss_pred CCCCCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 105 KPGEKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 105 ~~~~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
....+|+|+|.|| |..|.++|+.|++.|++|++++++.
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 48 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDE 48 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3445788999997 6899999999999999999998765
No 493
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=88.91 E-value=0.42 Score=43.27 Aligned_cols=35 Identities=17% Similarity=0.130 Sum_probs=31.1
Q ss_pred CCCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 108 EKPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 108 ~~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++++|+|.|| |..|.++|+.|.+.|++|++++++.
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN 41 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3678999997 8999999999999999999998764
No 494
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=88.86 E-value=0.38 Score=42.86 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=29.8
Q ss_pred cEEEEC-CCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 111 RVVVLG-TGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 111 ~VvIIG-gG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+|+|.| +|+.|..++..|.+.|++|+++.+++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 799999 69999999999999999999998875
No 495
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=88.81 E-value=0.36 Score=46.25 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=30.5
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|.|| |+.|..++..|.+.|++|+++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFH 36 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 468999996 9999999999999999999998754
No 496
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.80 E-value=0.41 Score=45.22 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCC-eEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIY-DAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~-~Vtvie~~~ 142 (441)
.++++|+|+|-+|..++..|.+.|. +|+|++|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 6799999999999999999999996 999998864
No 497
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=88.79 E-value=0.3 Score=46.28 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=31.5
Q ss_pred CCcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCCC
Q 013546 109 KPRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRNH 143 (441)
Q Consensus 109 ~k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~~ 143 (441)
+++|+|.|| |..|..++..|.+.|++|+++.+++.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 468999996 99999999999999999999988763
No 498
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=88.78 E-value=0.37 Score=45.36 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=30.2
Q ss_pred CcEEEECC-CHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGT-GWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGg-G~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
++|+|.|| |+.|..++..|.+.|++|+++++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 34 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS 34 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 37999998 9999999999999999999998765
No 499
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.73 E-value=0.19 Score=47.25 Aligned_cols=32 Identities=6% Similarity=-0.013 Sum_probs=29.3
Q ss_pred CcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 110 PRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 110 k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
.+|.|||.|..|...|..|.+.|++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999997 54
No 500
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.71 E-value=0.25 Score=46.45 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHhhccCCCeEEEEcCCC
Q 013546 109 KPRVVVLGTGWGACRFLKGIDTKIYDAVCISPRN 142 (441)
Q Consensus 109 ~k~VvIIGgG~aGl~aA~~L~~~g~~Vtvie~~~ 142 (441)
+++|+|||+|-+|..+|..|.+.|++|++++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 5689999999999999999999899999998763
Done!