Query 013547
Match_columns 441
No_of_seqs 179 out of 784
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 12:38:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013547.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013547hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2o14a2 c.23.10.8 (A:160-367) 96.5 0.0048 3.5E-07 53.6 9.2 94 258-390 68-161 (208)
2 d3dc7a1 c.23.10.9 (A:18-224) U 96.3 0.016 1.2E-06 49.1 11.8 15 168-182 2-16 (207)
3 d3bzwa1 c.23.10.9 (A:38-285) U 79.9 0.29 2.1E-05 40.5 1.6 14 169-182 7-20 (248)
4 d1pvva2 c.78.1.1 (A:151-313) O 73.8 0.61 4.4E-05 39.2 1.9 25 168-194 2-26 (163)
5 d1otha2 c.78.1.1 (A:185-354) O 69.2 0.83 6E-05 38.3 1.7 25 168-194 2-26 (170)
6 d1vlva2 c.78.1.1 (A:153-313) O 64.8 1.5 0.00011 36.4 2.4 26 168-194 1-26 (161)
7 d1vjga_ c.23.10.6 (A:) Hypothe 59.9 1.4 9.9E-05 36.0 1.2 42 260-312 71-112 (201)
8 d1yzfa1 c.23.10.5 (A:1-195) Li 53.7 1.7 0.00013 35.9 0.9 23 365-389 131-153 (195)
9 d1dxha2 c.78.1.1 (A:151-335) O 53.2 2.9 0.00021 35.4 2.3 26 168-194 3-28 (185)
10 d1pg5a2 c.78.1.1 (A:147-299) A 48.4 4.2 0.0003 33.3 2.5 27 168-194 1-27 (153)
11 d1fxwf_ c.23.10.3 (F:) Platele 42.5 4.5 0.00032 34.3 1.8 31 297-329 107-137 (212)
12 d1ekxa2 c.78.1.1 (A:151-310) A 42.4 4.5 0.00033 33.2 1.7 27 168-194 2-28 (160)
13 d2at2a2 c.78.1.1 (A:145-295) A 39.5 6.6 0.00048 32.1 2.3 27 169-195 2-28 (151)
14 d1es9a_ c.23.10.3 (A:) Platele 37.7 6.4 0.00046 33.2 2.0 31 297-329 107-137 (212)
15 d1k7ca_ c.23.10.4 (A:) Rhamnog 36.7 34 0.0025 27.7 6.7 79 296-401 107-200 (233)
16 d1ml4a2 c.78.1.1 (A:152-308) A 36.3 5.6 0.00041 32.3 1.3 27 168-194 2-28 (157)
17 d2hsja1 c.23.10.3 (A:1-211) Un 36.1 6.4 0.00046 33.1 1.7 31 297-329 102-132 (211)
18 d1jrla_ c.23.10.5 (A:) Thioest 30.9 7.9 0.00058 31.2 1.4 47 261-327 62-108 (179)
19 d1k7ca_ c.23.10.4 (A:) Rhamnog 29.4 7.8 0.00057 32.0 1.1 10 172-181 2-11 (233)
20 d1duvg2 c.78.1.1 (G:151-333) O 25.5 16 0.0012 30.3 2.4 26 168-194 3-28 (183)
21 d1vcca_ d.121.1.1 (A:) Vaccini 24.9 4.7 0.00035 29.4 -1.0 15 171-185 55-70 (77)
No 1
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=96.48 E-value=0.0048 Score=53.58 Aligned_cols=94 Identities=9% Similarity=-0.023 Sum_probs=48.2
Q ss_pred ccCCccEEEEecceecccCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEeeCCCCCCCCCCCC
Q 013547 258 QWEQADILVFNSYLWWRQGPVKLLWSSEENGVCEELDGLGAMELAMSAWADWVASKLNPLKKRVFFVTMSPTHLWSREWQ 337 (441)
Q Consensus 258 ~w~~~DVLV~ntG~Ww~~~~~~~~~~~~~~~~~~~~~~~~Ayr~al~t~~~~v~~~~~~~kt~VffRT~SP~Hf~~g~W~ 337 (441)
.....|+|||..|.= .. .. ..-...+.|+..|+++++.+.+ . ...+++-+..|. +. +.
T Consensus 68 ~~~~~D~vvi~~G~N---D~-~~----------~~~~~~~~~~~~l~~li~~~~~---~-~~~~vl~~~~~~-~~---~~ 125 (208)
T d2o14a2 68 YIKPGDYFMLQLGIN---DT-NP----------KHKESEAEFKEVMRDMIRQVKA---K-GADVILSTPQGR-AT---DF 125 (208)
T ss_dssp TCCTTCEEEEECCTG---GG-CG----------GGCCCHHHHHHHHHHHHHHHHT---T-TCEEEEECCCCC-TT---CB
T ss_pred hcCCCCEEEEEcCCC---cc-cc----------cccccHHHHHHHHHHHHHHHHh---c-CCceeecccccc-cc---cc
Confidence 345679999987732 10 00 0012367788888888887654 2 333444333332 11 00
Q ss_pred CCCCCCCCCCCccCCCCCcCCCCCChhhHHHHHHHHHhcCCceEEeecccccc
Q 013547 338 PGSEGNCYNEKIPIDLEGYWGSGSDLPTMRMLDKVLSKLGSKVTVLNITQLSE 390 (441)
Q Consensus 338 ~~~gg~C~~~t~P~~~~~~~~~~~d~~~~~vv~~~~~~~~~~v~lLDIT~ls~ 390 (441)
....... ....+.+.+++++.++ ..+.++|++.++.
T Consensus 126 -----~~~~~~~----------~~~~~~~~~~~~~a~~--~~v~~vD~~~~~~ 161 (208)
T d2o14a2 126 -----TSEGIHS----------SVNRWYRASILALAEE--EKTYLIDLNVLSS 161 (208)
T ss_dssp -----CTTSCBC----------CTTSTTHHHHHHHHHH--TTCEEECHHHHHH
T ss_pred -----ccccchH----------HHHHHHHHHHHHhhcc--CCcEEeccHHHHH
Confidence 0000000 0112345667777666 4688899887764
No 2
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]}
Probab=96.35 E-value=0.016 Score=49.12 Aligned_cols=15 Identities=33% Similarity=0.510 Sum_probs=12.8
Q ss_pred HcCCcEEEEecchhH
Q 013547 168 LRGKRLMFVGDSLNR 182 (441)
Q Consensus 168 LRgKri~FVGDSl~R 182 (441)
+..|||+|+|||++-
T Consensus 2 ~~~kri~~iGDSit~ 16 (207)
T d3dc7a1 2 VSFKRPAWLGDSITA 16 (207)
T ss_dssp BCCSSEEEEESTTTS
T ss_pred CCCCEEEEEehHhhc
Confidence 357999999999984
No 3
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=79.86 E-value=0.29 Score=40.53 Aligned_cols=14 Identities=36% Similarity=0.880 Sum_probs=12.6
Q ss_pred cCCcEEEEecchhH
Q 013547 169 RGKRLMFVGDSLNR 182 (441)
Q Consensus 169 RgKri~FVGDSl~R 182 (441)
.||+|+|+|||++-
T Consensus 7 ~~kkI~~~GDS~T~ 20 (248)
T d3bzwa1 7 QGKKVGYIGDSITD 20 (248)
T ss_dssp TTCEEEEEESTTTC
T ss_pred CCCEEEEEehHHcc
Confidence 58999999999984
No 4
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=73.80 E-value=0.61 Score=39.17 Aligned_cols=25 Identities=20% Similarity=0.419 Sum_probs=21.7
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcc
Q 013547 168 LRGKRLMFVGDSLNRGQWISMLCLLQS 194 (441)
Q Consensus 168 LRgKri~FVGDSl~Rnq~eSLlCLL~~ 194 (441)
|.|++|+|||| .+|...||+-+|..
T Consensus 2 l~gl~Ia~VGD--~~nv~~Sli~~l~~ 26 (163)
T d1pvva2 2 IKGVKVVYVGD--GNNVAHSLMIAGTK 26 (163)
T ss_dssp CTTCEEEEESC--CCHHHHHHHHHHHH
T ss_pred cCCCEEEEECC--CcHHHHHHHHHHHH
Confidence 57999999999 57898999988874
No 5
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.24 E-value=0.83 Score=38.30 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=21.0
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcc
Q 013547 168 LRGKRLMFVGDSLNRGQWISMLCLLQS 194 (441)
Q Consensus 168 LRgKri~FVGDSl~Rnq~eSLlCLL~~ 194 (441)
|.|++|+|||| .+|-..||+-++..
T Consensus 2 l~gl~I~~vGD--~~nV~~Sli~~~~~ 26 (170)
T d1otha2 2 LKGLTLSWIGD--GNNILHSIMMSAAK 26 (170)
T ss_dssp CTTCEEEEESC--SSHHHHHHHTTTGG
T ss_pred CCCCEEEEEcC--chhHHHHHHHHHHH
Confidence 57999999999 36788999887774
No 6
>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}
Probab=64.79 E-value=1.5 Score=36.39 Aligned_cols=26 Identities=27% Similarity=0.505 Sum_probs=20.8
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcc
Q 013547 168 LRGKRLMFVGDSLNRGQWISMLCLLQS 194 (441)
Q Consensus 168 LRgKri~FVGDSl~Rnq~eSLlCLL~~ 194 (441)
|.|++|+||||=-+ |-..|++-++..
T Consensus 1 l~g~ki~~vGD~~n-nV~~Sli~~~~~ 26 (161)
T d1vlva2 1 LKGVKVVFMGDTRN-NVATSLMIACAK 26 (161)
T ss_dssp STTCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCcc-HHHHHHHHHHHH
Confidence 57999999999214 688899888774
No 7
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]}
Probab=59.94 E-value=1.4 Score=36.03 Aligned_cols=42 Identities=14% Similarity=-0.008 Sum_probs=23.8
Q ss_pred CCccEEEEecceecccCCccccccccccCccccCCHHHHHHHHHHHHHHHHHh
Q 013547 260 EQADILVFNSYLWWRQGPVKLLWSSEENGVCEELDGLGAMELAMSAWADWVAS 312 (441)
Q Consensus 260 ~~~DVLV~ntG~Ww~~~~~~~~~~~~~~~~~~~~~~~~Ayr~al~t~~~~v~~ 312 (441)
..+|+|||..|.--.... .+ ......+.|+..|++.++.+..
T Consensus 71 ~~~d~vii~~G~ND~~~~---------~~--~~~~~~~~~~~~l~~~i~~~~~ 112 (201)
T d1vjga_ 71 EYNSLVVFSFGLNDTTLE---------NG--KPRVSIAETIKNTREILTQAKK 112 (201)
T ss_dssp TSEEEEEEECCHHHHCEE---------TT--EESSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccccc---------cc--ccCCCHHHHHHHHHHHHHHhhc
Confidence 468999999986421110 00 0012256777777777766544
No 8
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]}
Probab=53.75 E-value=1.7 Score=35.93 Aligned_cols=23 Identities=9% Similarity=0.232 Sum_probs=15.0
Q ss_pred hHHHHHHHHHhcCCceEEeeccccc
Q 013547 365 TMRMLDKVLSKLGSKVTVLNITQLS 389 (441)
Q Consensus 365 ~~~vv~~~~~~~~~~v~lLDIT~ls 389 (441)
++++++++.++ ..+.++|++...
T Consensus 131 ~~~~~~~~a~~--~~v~~vd~~~~~ 153 (195)
T d1yzfa1 131 LVKVAQEVGAA--HNLPVIDLYKAM 153 (195)
T ss_dssp HHHHHHHHHHH--TTCCEECHHHHH
T ss_pred HHHHHHHHHHh--hCCeEeehHHHH
Confidence 44555555555 478899987654
No 9
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=53.21 E-value=2.9 Score=35.42 Aligned_cols=26 Identities=23% Similarity=0.271 Sum_probs=22.4
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcc
Q 013547 168 LRGKRLMFVGDSLNRGQWISMLCLLQS 194 (441)
Q Consensus 168 LRgKri~FVGDSl~Rnq~eSLlCLL~~ 194 (441)
|.|.+|+||||.-+ |...||+-++..
T Consensus 3 l~~lkia~vGD~~n-nV~~Sli~~~~~ 28 (185)
T d1dxha2 3 LHDISYAYLGDARN-NMGNSLLLIGAK 28 (185)
T ss_dssp GGGCEEEEESCCSS-HHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCcc-hHHHHHHHHHHH
Confidence 67899999999766 699999998874
No 10
>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=48.38 E-value=4.2 Score=33.25 Aligned_cols=27 Identities=22% Similarity=0.276 Sum_probs=22.4
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcc
Q 013547 168 LRGKRLMFVGDSLNRGQWISMLCLLQS 194 (441)
Q Consensus 168 LRgKri~FVGDSl~Rnq~eSLlCLL~~ 194 (441)
|.|++|+||||-..=+-..||+-+|..
T Consensus 1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~ 27 (153)
T d1pg5a2 1 IDGLVFALLGDLKYARTVNSLLRILTR 27 (153)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGG
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHH
Confidence 469999999998765688899888874
No 11
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]}
Probab=42.49 E-value=4.5 Score=34.32 Aligned_cols=31 Identities=6% Similarity=0.236 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEeeCCCC
Q 013547 297 GAMELAMSAWADWVASKLNPLKKRVFFVTMSPT 329 (441)
Q Consensus 297 ~Ayr~al~t~~~~v~~~~~~~kt~VffRT~SP~ 329 (441)
+.+...++.+++.+.+. .+++.|++-+..|.
T Consensus 107 ~~~~~~~~~~i~~i~~~--~p~~~Ii~~~~~P~ 137 (212)
T d1fxwf_ 107 EEVAGGIEAIVQLINTR--QPQAKIIVLGLLPR 137 (212)
T ss_dssp HHHHHHHHHHHHHHHHH--CTTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHH--hccccccceeeccc
Confidence 34455566666666543 34577888888775
No 12
>d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}
Probab=42.42 E-value=4.5 Score=33.15 Aligned_cols=27 Identities=22% Similarity=0.145 Sum_probs=21.2
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcc
Q 013547 168 LRGKRLMFVGDSLNRGQWISMLCLLQS 194 (441)
Q Consensus 168 LRgKri~FVGDSl~Rnq~eSLlCLL~~ 194 (441)
+.|.+|+||||..+=+-..||+-+|..
T Consensus 2 l~gl~i~~vGD~~nsrv~~Sli~~l~~ 28 (160)
T d1ekxa2 2 LDNLHVAMVGDLKYGRTVHSLTQALAK 28 (160)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHTT
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHHHH
Confidence 679999999998865567788776653
No 13
>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}
Probab=39.47 E-value=6.6 Score=32.12 Aligned_cols=27 Identities=19% Similarity=0.119 Sum_probs=23.1
Q ss_pred cCCcEEEEecchhHHHHHHHHHhhccc
Q 013547 169 RGKRLMFVGDSLNRGQWISMLCLLQSV 195 (441)
Q Consensus 169 RgKri~FVGDSl~Rnq~eSLlCLL~~~ 195 (441)
.|.+|+||||...=+...||+-++...
T Consensus 2 ~gl~i~~vGD~~~srv~~Sl~~~~~~~ 28 (151)
T d2at2a2 2 KGLTVSIHGDIKHSRVARSNAEVLTRL 28 (151)
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHc
Confidence 589999999988777999999888753
No 14
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]}
Probab=37.68 E-value=6.4 Score=33.21 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEeeCCCC
Q 013547 297 GAMELAMSAWADWVASKLNPLKKRVFFVTMSPT 329 (441)
Q Consensus 297 ~Ayr~al~t~~~~v~~~~~~~kt~VffRT~SP~ 329 (441)
+.+...++++++.+... ..++.|++-+..|.
T Consensus 107 ~~~~~~~~~ii~~l~~~--~p~~~Ii~~~~~p~ 137 (212)
T d1es9a_ 107 EQVTGGIKAIVQLVNER--QPQARVVVLGLLPR 137 (212)
T ss_dssp HHHHHHHHHHHHHHHHH--STTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHh--hccccccceeeeec
Confidence 44555666666665543 34567888887764
No 15
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=36.67 E-value=34 Score=27.67 Aligned_cols=79 Identities=11% Similarity=0.162 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEeeCCCCCCCCCCCCCCCCCCCCCCCccCCCCCcCCCCCChhhHHHHHHHHHh
Q 013547 296 LGAMELAMSAWADWVASKLNPLKKRVFFVTMSPTHLWSREWQPGSEGNCYNEKIPIDLEGYWGSGSDLPTMRMLDKVLSK 375 (441)
Q Consensus 296 ~~Ayr~al~t~~~~v~~~~~~~kt~VffRT~SP~Hf~~g~W~~~~gg~C~~~t~P~~~~~~~~~~~d~~~~~vv~~~~~~ 375 (441)
...|+..|+++++.+.. ....|++-+..|.-. +.. . .+ ........+.++++.++
T Consensus 107 ~~~~~~~l~~~i~~~~~----~~~~~i~~~~~~~~~----~~~--------~-------~~--~~~~~~~~~~~~~~a~~ 161 (233)
T d1k7ca_ 107 ILTFPAYLENAAKLFTA----KGAKVILSSQTPNNP----WET--------G-------TF--VNSPTRFVEYAELAAEV 161 (233)
T ss_dssp EEBHHHHHHHHHHHHHH----TTCEEEEECCCCCCT----TTT--------S-------SC--CCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----cCCEEEEEecCcccc----ccc--------c-------ch--hhhHHHHHHHHHHHHHH
Confidence 44567777777666543 245676666555421 111 0 00 00122456667776665
Q ss_pred cCCceEEeecccccc--------------ccccC-CCCccc
Q 013547 376 LGSKVTVLNITQLSE--------------YRKDG-HPSIYR 401 (441)
Q Consensus 376 ~~~~v~lLDIT~ls~--------------~R~Dg-Hps~y~ 401 (441)
..+.++|+..++. +.+|+ ||+..+
T Consensus 162 --~~v~~iDl~~~~~~~~~~~~~~~~~~~~~~DgiHpn~~G 200 (233)
T d1k7ca_ 162 --AGVEYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPAG 200 (233)
T ss_dssp --HTCEEECHHHHHHHHHHHHCHHHHHHTCSSSSSCCCHHH
T ss_pred --cCCCeeeHHHHHHHHHHHcCchhhhhhcCCCCcCCCHHH
Confidence 3688999877552 45787 999765
No 16
>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=36.29 E-value=5.6 Score=32.28 Aligned_cols=27 Identities=19% Similarity=0.156 Sum_probs=21.6
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcc
Q 013547 168 LRGKRLMFVGDSLNRGQWISMLCLLQS 194 (441)
Q Consensus 168 LRgKri~FVGDSl~Rnq~eSLlCLL~~ 194 (441)
|.|++|+||||=..=+-..||+.+|..
T Consensus 2 l~gl~i~~vGD~~~srV~~Sli~~~~~ 28 (157)
T d1ml4a2 2 IDGLKIGLLGDLKYGRTVHSLAEALTF 28 (157)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGG
T ss_pred cCCCEEEEEcCCccChHHHHHHHHHHh
Confidence 679999999997655567888888874
No 17
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=36.09 E-value=6.4 Score=33.07 Aligned_cols=31 Identities=13% Similarity=0.069 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEeeCCCC
Q 013547 297 GAMELAMSAWADWVASKLNPLKKRVFFVTMSPT 329 (441)
Q Consensus 297 ~Ayr~al~t~~~~v~~~~~~~kt~VffRT~SP~ 329 (441)
+.+...++.+++.+.+. .+++.|++-|..|.
T Consensus 102 ~~~~~~~~~li~~i~~~--~p~~~i~v~~~~P~ 132 (211)
T d2hsja1 102 NEALNNLEAIIQSVARD--YPLTEIKLLSILPV 132 (211)
T ss_dssp HHHHHHHHHHHHHHHHH--CTTCEEEEECCCCC
T ss_pred HHHHHhhhhhhhhhccc--cccceEEEeeecCC
Confidence 44555566666655543 34578888888876
No 18
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]}
Probab=30.88 E-value=7.9 Score=31.18 Aligned_cols=47 Identities=6% Similarity=-0.074 Sum_probs=27.5
Q ss_pred CccEEEEecceecccCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhcCCCcceEEEeeCC
Q 013547 261 QADILVFNSYLWWRQGPVKLLWSSEENGVCEELDGLGAMELAMSAWADWVASKLNPLKKRVFFVTMS 327 (441)
Q Consensus 261 ~~DVLV~ntG~Ww~~~~~~~~~~~~~~~~~~~~~~~~Ayr~al~t~~~~v~~~~~~~kt~VffRT~S 327 (441)
.+|+||+..|.- ... .. .....+++.++.+++.+.+ ...+|++-++.
T Consensus 62 ~pd~vii~~G~N---D~~------------~~-~~~~~~~~~~~~~i~~~~~----~~~~vil~~~~ 108 (179)
T d1jrla_ 62 QPRWVLVELGGN---DGL------------RG-FQPQQTEQTLRQILQDVKA----ANAEPLLMQIR 108 (179)
T ss_dssp CCSEEEEECCTT---TTT------------TT-CCHHHHHHHHHHHHHHHHH----TTCEEEEECCC
T ss_pred CCcEEEEEEecc---ccc------------cc-cchhhhhhhHHHHHHHHHh----ccCcEEEEecc
Confidence 569999988852 110 00 1256777777777776655 23556665543
No 19
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=29.41 E-value=7.8 Score=32.02 Aligned_cols=10 Identities=30% Similarity=0.451 Sum_probs=9.0
Q ss_pred cEEEEecchh
Q 013547 172 RLMFVGDSLN 181 (441)
Q Consensus 172 ri~FVGDSl~ 181 (441)
+|+|+|||++
T Consensus 2 ti~~~GDS~~ 11 (233)
T d1k7ca_ 2 TVYLAGDSTM 11 (233)
T ss_dssp EEEEECCTTT
T ss_pred EEEEEehhhc
Confidence 7999999986
No 20
>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}
Probab=25.49 E-value=16 Score=30.30 Aligned_cols=26 Identities=27% Similarity=0.259 Sum_probs=20.1
Q ss_pred HcCCcEEEEecchhHHHHHHHHHhhcc
Q 013547 168 LRGKRLMFVGDSLNRGQWISMLCLLQS 194 (441)
Q Consensus 168 LRgKri~FVGDSl~Rnq~eSLlCLL~~ 194 (441)
+.|.+|+||||.-+ |...||+-+++.
T Consensus 3 ~~~l~i~~vGD~~n-nv~~Sli~~~~~ 28 (183)
T d1duvg2 3 FNEMTLVYAGDARN-NMGNSMLEAAAL 28 (183)
T ss_dssp GGGCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCcc-HHHHHHHHHHHH
Confidence 56889999999535 688888877763
No 21
>d1vcca_ d.121.1.1 (A:) Vaccinia DNA topoisomerase I, 9 kDa N-terminal fragment {Vaccinia virus, strain WR [TaxId: 10245]}
Probab=24.85 E-value=4.7 Score=29.41 Aligned_cols=15 Identities=60% Similarity=0.977 Sum_probs=11.3
Q ss_pred CcEEEEe-cchhHHHH
Q 013547 171 KRLMFVG-DSLNRGQW 185 (441)
Q Consensus 171 Kri~FVG-DSl~Rnq~ 185 (441)
.+|+||| ||-+|-|+
T Consensus 55 ~~LIfvG~DSKgrkQY 70 (77)
T d1vcca_ 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceEE
Confidence 4589999 88877664
Done!