Query 013551
Match_columns 441
No_of_seqs 168 out of 1095
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 12:42:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013551.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013551hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x3ha2 g.39.1.3 (A:43-74) Leu 8.5 48 0.0035 19.6 0.6 16 22-37 7-22 (32)
2 d2e74g1 f.23.26.1 (G:9-35) Pet 7.4 79 0.0058 17.4 1.2 11 51-61 15-25 (27)
3 d1zava1 d.58.62.1 (A:1-177) Ri 6.2 1.4E+02 0.01 23.8 2.8 30 220-249 127-156 (177)
4 d2axtl1 f.23.31.1 (L:1-37) Pho 6.1 1.8E+02 0.013 17.2 2.4 15 149-163 18-32 (37)
5 d1q25a2 b.64.1.1 (A:130-280) C 5.9 73 0.0053 24.7 0.7 17 29-45 9-25 (151)
6 d2hf5a1 a.39.1.5 (A:81-113) Tr 4.4 1.2E+02 0.0086 17.7 0.7 8 28-35 10-17 (33)
7 d1q90m_ f.23.25.1 (M:) PetM su 4.1 2.8E+02 0.021 15.8 2.3 14 387-400 2-15 (34)
8 d1ymga1 f.19.1.1 (A:6-239) Aqu 4.1 1.6E+02 0.012 24.5 1.8 18 234-251 86-103 (234)
9 d1ctda_ a.39.1.5 (A:) Troponin 4.0 1.3E+02 0.0095 17.6 0.7 18 28-56 11-28 (34)
10 d1fx8a_ f.19.1.1 (A:) Glycerol 3.8 2.9E+02 0.021 23.1 3.3 23 233-255 85-107 (254)
No 1
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.47 E-value=48 Score=19.62 Aligned_cols=16 Identities=13% Similarity=0.366 Sum_probs=13.4
Q ss_pred ccccchhhhccCCccc
Q 013551 22 FPIFSNQLFTSSGHKY 37 (441)
Q Consensus 22 ~P~~s~~~fd~~G~~Y 37 (441)
-||.+.+-|.-+|++|
T Consensus 7 ~PF~~~~Fy~~~g~Py 22 (32)
T d1x3ha2 7 TSFSTGSFFELDGRPF 22 (32)
T ss_dssp CBSCSSCCEESSSCEE
T ss_pred CcCCCCCeEeECCccc
Confidence 4888888888888887
No 2
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=7.40 E-value=79 Score=17.40 Aligned_cols=11 Identities=27% Similarity=0.498 Sum_probs=8.3
Q ss_pred HHHHHhcCCCc
Q 013551 51 IPAYNSYGKLY 61 (441)
Q Consensus 51 ~~~y~~ysp~~ 61 (441)
-++|+||..|.
T Consensus 15 ~aayqqykrpn 25 (27)
T d2e74g1 15 YAAYQQYKRPN 25 (27)
T ss_dssp HHHHHHTTSCC
T ss_pred HHHHHHhcCCC
Confidence 46899998773
No 3
>d1zava1 d.58.62.1 (A:1-177) Ribosomal protein L10 {Thermotoga maritima [TaxId: 2336]}
Probab=6.16 E-value=1.4e+02 Score=23.82 Aligned_cols=30 Identities=23% Similarity=0.358 Sum_probs=24.0
Q ss_pred chhhhcCCChhhHHHHHhhhhhhhHHHHHH
Q 013551 220 KLGHYMKIPPRCMYTAQLVGTIVSGVVNLG 249 (441)
Q Consensus 220 KlG~y~k~pPR~~f~aQiiGtivg~~v~~~ 249 (441)
++-.+.++|+|...++|++|.+-+..-+.+
T Consensus 127 ~i~~la~LPs~eel~a~l~~~L~ap~~~l~ 156 (177)
T d1zava1 127 EVENIAKLPSKEELYAMLVGRVKAPITGLV 156 (177)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhHHHHHH
Confidence 345788999999999999999887655443
No 4
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=6.06 E-value=1.8e+02 Score=17.22 Aligned_cols=15 Identities=27% Similarity=0.671 Sum_probs=7.9
Q ss_pred hHHHHHHHHHHHHHh
Q 013551 149 WWGMLFAFALAWIVT 163 (441)
Q Consensus 149 ~w~~ilal~l~~i~~ 163 (441)
.|++++..+++..|+
T Consensus 18 y~GlLlifvl~vLFs 32 (37)
T d2axtl1 18 YLGLLLILVLALLFS 32 (37)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 355555555555543
No 5
>d1q25a2 b.64.1.1 (A:130-280) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.90 E-value=73 Score=24.65 Aligned_cols=17 Identities=18% Similarity=0.239 Sum_probs=12.3
Q ss_pred hhccCCcccccceecCC
Q 013551 29 LFTSSGHKYDTTKILTP 45 (441)
Q Consensus 29 ~fd~~G~~Yn~s~il~~ 45 (441)
++|.+|+.||.|.+.+.
T Consensus 9 v~d~~g~~fDLspL~~~ 25 (151)
T d1q25a2 9 AFDRELKKHDLNPLIKT 25 (151)
T ss_dssp EECTTCCEEECGGGCCS
T ss_pred EECCCCCEEeCchhhcc
Confidence 56777888888877654
No 6
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=4.36 E-value=1.2e+02 Score=17.74 Aligned_cols=8 Identities=25% Similarity=0.779 Sum_probs=5.5
Q ss_pred hhhccCCc
Q 013551 28 QLFTSSGH 35 (441)
Q Consensus 28 ~~fd~~G~ 35 (441)
++||++|+
T Consensus 10 ~~FDkDg~ 17 (33)
T d2hf5a1 10 RVFDKDGN 17 (33)
T ss_dssp HHHSSSCC
T ss_pred HHhCCCCC
Confidence 57887664
No 7
>d1q90m_ f.23.25.1 (M:) PetM subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=4.10 E-value=2.8e+02 Score=15.79 Aligned_cols=14 Identities=43% Similarity=0.339 Sum_probs=9.7
Q ss_pred hhhhhhhHHHHHHH
Q 013551 387 AALDAGTAFMGVLL 400 (441)
Q Consensus 387 AgL~aG~ai~~lii 400 (441)
|++++|+++..+-+
T Consensus 2 a~fiagta~tmig~ 15 (34)
T d1q90m_ 2 AEFIAGTALTMVGM 15 (34)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CceecchhHHHHHH
Confidence 67888888765533
No 8
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.09 E-value=1.6e+02 Score=24.47 Aligned_cols=18 Identities=33% Similarity=0.503 Sum_probs=14.9
Q ss_pred HHHhhhhhhhHHHHHHHH
Q 013551 234 TAQLVGTIVSGVVNLGVA 251 (441)
Q Consensus 234 ~aQiiGtivg~~v~~~v~ 251 (441)
.+|++|.++|+.+...++
T Consensus 86 ~aQ~lGa~~ga~l~~~~~ 103 (234)
T d1ymga1 86 VAQLLGAVAGAAVLYSVT 103 (234)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred ehHHHHHHHHHHHHHHHc
Confidence 799999999998776554
No 9
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=4.03 E-value=1.3e+02 Score=17.55 Aligned_cols=18 Identities=11% Similarity=0.298 Sum_probs=11.3
Q ss_pred hhhccCCcccccceecCCCCccCHHHHHh
Q 013551 28 QLFTSSGHKYDTTKILTPQYDLNIPAYNS 56 (441)
Q Consensus 28 ~~fd~~G~~Yn~s~il~~~~~l~~~~y~~ 56 (441)
++||+|+ ||-+|.+.+.+
T Consensus 11 RifDkNa-----------DGyiD~eEl~~ 28 (34)
T d1ctda_ 11 RIFDKNA-----------DGYIDIEELGE 28 (34)
T ss_dssp HTTCCSS-----------SSCBCHHHHHH
T ss_pred HHHccCC-----------cccccHHHHHH
Confidence 5677765 56677666543
No 10
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}
Probab=3.82 E-value=2.9e+02 Score=23.05 Aligned_cols=23 Identities=13% Similarity=0.378 Sum_probs=19.0
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHH
Q 013551 233 YTAQLVGTIVSGVVNLGVAWWML 255 (441)
Q Consensus 233 f~aQiiGtivg~~v~~~v~~~~l 255 (441)
..+|++|.++|+.+...++.-..
T Consensus 85 i~aQ~lGa~~ga~l~~~~~~~~~ 107 (254)
T d1fx8a_ 85 IVSQVAGAFCAAALVYGLYYNLF 107 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Confidence 46899999999999998875544
Done!