BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013553
(441 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225437241|ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
gi|297735508|emb|CBI17948.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/431 (70%), Positives = 349/431 (80%), Gaps = 4/431 (0%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+N VVKV+RETIAACMTCP+CN LLRDATTISECLHTFCRKCIY+KISDEE+ECCP+CN
Sbjct: 2 SNQVVKVRRETIAACMTCPLCNKLLRDATTISECLHTFCRKCIYNKISDEELECCPICNT 61
Query: 70 DLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPR 129
DLGCVPLEKLRPDH LQDVRAKIFP KRRKVKAPE V VTLPV+RKERSLSSLVVS PR
Sbjct: 62 DLGCVPLEKLRPDHNLQDVRAKIFPFKRRKVKAPEVVLPVTLPVKRKERSLSSLVVSTPR 121
Query: 130 VSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
VS QTTMT RR+ + ARKA ALRGS S +K KKEEDSV + +SSPETLNK +QN+
Sbjct: 122 VSTQTTMTGRRTKSVARKATALRGSGFSIEKLIKKEEDSVGERPASSSSPETLNKFTQNI 181
Query: 190 KPMQSSSSAQPS-QPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEA 248
+ Q+S SA+PS +KE +N AE EGK DLWKPLN LVEVA+RT+SLK NS GS
Sbjct: 182 R--QNSPSAEPSIHSTPNKETENGAESWEGKFDLWKPLNCLVEVANRTKSLKFNSQGSAV 239
Query: 249 KAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFG 308
K+EP + D E+QV KTK KE KSK ++ + P ++E++ PK+L R+RR+ AAAFG
Sbjct: 240 KSEPMHVPDGESQVRKTKVKEHGRKSKVQDEKISTTPVSAESVKPKKLCRVRRRRAAAFG 299
Query: 309 DSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFI 368
+ ISPQAVL+A ++RR G IWFSLVASEDQ G LPQISS++LRIKD N+PVSFI
Sbjct: 300 ELGISPQAVLNAVN-NHKRRTGSIWFSLVASEDQEGDASLPQISSNFLRIKDVNVPVSFI 358
Query: 369 QKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFV 428
QKYLM KLDL SE+EVEIKCMGQPV+PTLQL+NLVDLWLQTASTS RVPA IGSS K+FV
Sbjct: 359 QKYLMRKLDLTSETEVEIKCMGQPVLPTLQLHNLVDLWLQTASTSQRVPASIGSSGKEFV 418
Query: 429 MVLTYARKVRD 439
MVL YAR++ D
Sbjct: 419 MVLAYARRLLD 429
>gi|356503576|ref|XP_003520583.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 445
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 288/434 (66%), Positives = 340/434 (78%), Gaps = 5/434 (1%)
Query: 5 REMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECC 64
R + +N VVKV+R TI ACMTCP+CN L R+ATTISECLHTFCRKCIYDKI+DEEIECC
Sbjct: 13 RRSSMSNQVVKVRRNTIVACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEEIECC 72
Query: 65 PVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLV 124
P+CNIDLGCVPLEKLRPDH+LQDVRAK+FPLK RKVKAPE V SV LP RRKERSLSSLV
Sbjct: 73 PICNIDLGCVPLEKLRPDHSLQDVRAKVFPLKGRKVKAPEVVTSVPLPARRKERSLSSLV 132
Query: 125 VSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNK 184
VS PRVS Q MT RR+ RKA+ LR ++ S +KP KKEED +ED D +SSP+T K
Sbjct: 133 VSTPRVSTQAAMTGRRTK-PTRKASGLRSTSFSIEKPIKKEEDLLEDRPDSSSSPDTSYK 191
Query: 185 LSQNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSL 244
+QN QS S + SQ I +K +N AE + K DLWKPLNFLVEVASR++S KSN++
Sbjct: 192 FAQNSG--QSISPCEGSQSIPNKGSENGAEPWDAKLDLWKPLNFLVEVASRSKSFKSNNV 249
Query: 245 -GSEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKT 303
GS+AK E + ++++QV KTKNKE+K K+K ++ ++P P +S+T P +LRRIR+K
Sbjct: 250 QGSDAKLETNQVNESDSQVQKTKNKENKRKAKIEDEKSSPYPVSSDTAKPNKLRRIRKKK 309
Query: 304 AAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNI 363
A G+S ISPQAVLD+A + R GPIWFSLVASE+Q G PLPQI +SYLRIKD +I
Sbjct: 310 ETASGESGISPQAVLDSASNRLS-RTGPIWFSLVASENQEGDAPLPQIPASYLRIKDGSI 368
Query: 364 PVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSS 423
VSFIQKYLM KLDL SE+EVEIKCMGQPV+PTLQLYNLV+LWL AST R+PA IGSS
Sbjct: 369 SVSFIQKYLMKKLDLTSETEVEIKCMGQPVLPTLQLYNLVELWLDMASTPQRIPATIGSS 428
Query: 424 AKDFVMVLTYARKV 437
AKDFVMVL Y RKV
Sbjct: 429 AKDFVMVLAYGRKV 442
>gi|356570616|ref|XP_003553481.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 428
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 286/430 (66%), Positives = 340/430 (79%), Gaps = 4/430 (0%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+N VVKV+R+TIAACMTCP+C L R+ATTISECLHTFCRKCIYDKI+DEEIECCP+CNI
Sbjct: 2 SNQVVKVRRDTIAACMTCPLCGKLFREATTISECLHTFCRKCIYDKITDEEIECCPICNI 61
Query: 70 DLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPR 129
DLGCVPLEKLRPDH+LQDVRAK+FPLK RKVKAPE V SV LP RRKERSLSSLVVS PR
Sbjct: 62 DLGCVPLEKLRPDHSLQDVRAKVFPLKGRKVKAPEVVTSVPLPARRKERSLSSLVVSTPR 121
Query: 130 VSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
VS Q TMT RR+ RKA+ LR ++ S +KP KKEE +ED D +SSP+T +K + N
Sbjct: 122 VSTQATMTGRRTK-PTRKASGLRSTSFSIEKPIKKEEYLLEDRPDSSSSPDTSHKFAHNS 180
Query: 190 KPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAK 249
QS S + SQ I +K +N AE + K DLWKPLN LVEVASR++S KSN LGS+AK
Sbjct: 181 G--QSMSPCEGSQSIPNKGSENGAEPWDAKLDLWKPLNCLVEVASRSKSFKSNILGSDAK 238
Query: 250 AEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGD 309
E + ++++QV K KNKE+K K+K ++ ++P P +S+T P +LRRIR+K A G+
Sbjct: 239 LETNQVNESDSQVLKIKNKENKRKAKIEDEKSSPYPVSSDTAKPNKLRRIRKKKEPASGE 298
Query: 310 SNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQ 369
S ISPQAVLD+A + R GPIWFSLVASE+Q G PLPQI +SYLRIKD ++PVSFIQ
Sbjct: 299 SGISPQAVLDSASNRLS-RTGPIWFSLVASENQEGDDPLPQIPASYLRIKDGSVPVSFIQ 357
Query: 370 KYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVM 429
KYLM KLDL SE+EVEIKC+GQPV+PTLQLYNLV+LWL TA TS R+PA IGSSAKDFVM
Sbjct: 358 KYLMKKLDLTSETEVEIKCVGQPVLPTLQLYNLVELWLDTAPTSQRIPATIGSSAKDFVM 417
Query: 430 VLTYARKVRD 439
VL YAR+V D
Sbjct: 418 VLAYARRVPD 427
>gi|224082740|ref|XP_002306821.1| predicted protein [Populus trichocarpa]
gi|222856270|gb|EEE93817.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 287/426 (67%), Positives = 332/426 (77%), Gaps = 3/426 (0%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VVKV+RETI ACMTCP+CN LLRDATTISECLHTFCRKCIY +ISDE ++ CP+CNI+LG
Sbjct: 10 VVKVRRETIEACMTCPLCNKLLRDATTISECLHTFCRKCIYQRISDEGLDSCPICNINLG 69
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPV-RRKERSLSSLVVSAPRVS 131
C+PLEKLRPDH LQDVR+KIFP KRRKV+APE V SVTLPV RRKERSLSSLVVS P+VS
Sbjct: 70 CIPLEKLRPDHNLQDVRSKIFPYKRRKVEAPEVVESVTLPVIRRKERSLSSLVVSTPKVS 129
Query: 132 AQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKP 191
QTT T RR+ RKAAALRGS S +KP KKE D ED+ + +SSPET K +QN +
Sbjct: 130 TQTTTTGRRTKPFPRKAAALRGSGFSIEKPIKKEHDRAEDSPESSSSPETPKKFNQNTR- 188
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
Q+SSSA+PSQP E +N AE +GKSDLW+PLNFLVEVA+RT+S KS ++AK E
Sbjct: 189 -QNSSSAEPSQPAPDDEAENGAEPRDGKSDLWQPLNFLVEVANRTKSFKSIPQVNDAKLE 247
Query: 252 PTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSN 311
+ +NE QVHKTK KE+K KSK ++ NN D + T+ PKRLRRIRRK AA S
Sbjct: 248 SRPVRENEPQVHKTKFKENKDKSKVKDEKNNIDNVSEGTVEPKRLRRIRRKKAAFNDVSG 307
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
IS AVL A AK ERR+GP+WFSL+ASE+Q G PLPQI SSYLR+KD N+PVSFIQKY
Sbjct: 308 ISSPAVLHTAAAKQERRSGPVWFSLLASEEQEGDAPLPQIPSSYLRLKDGNVPVSFIQKY 367
Query: 372 LMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVL 431
L+ KLDL SE EVEI+CMG+PVIPTL L NLVD WLQ A ++VP GSSAKDFVMVL
Sbjct: 368 LVKKLDLTSEVEVEIRCMGRPVIPTLLLCNLVDQWLQAAPKPEQVPVSAGSSAKDFVMVL 427
Query: 432 TYARKV 437
YARKV
Sbjct: 428 AYARKV 433
>gi|255559945|ref|XP_002520991.1| ring finger protein, putative [Ricinus communis]
gi|223539828|gb|EEF41408.1| ring finger protein, putative [Ricinus communis]
Length = 520
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/421 (66%), Positives = 329/421 (78%), Gaps = 6/421 (1%)
Query: 11 NLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNID 70
N VVKVKR+TIAACMTCP+C+ LL+DATTISECLHTFCRKCIY KISDE +ECCP+CNID
Sbjct: 3 NQVVKVKRDTIAACMTCPLCDMLLKDATTISECLHTFCRKCIYKKISDEGVECCPICNID 62
Query: 71 LGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRV 130
LGCVPLEKLRPDH LQDVRAKIFP KRRKV+APE SV LPVRRKERSLSSLVV+AP+V
Sbjct: 63 LGCVPLEKLRPDHNLQDVRAKIFPFKRRKVEAPEVTSSVILPVRRKERSLSSLVVNAPKV 122
Query: 131 SAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVK 190
SAQTT T RR+ RKA ALR SN +K KKE+D ED+ + +SSPET+NK +QN K
Sbjct: 123 SAQTTTTGRRTRPVLRKATALRISNFPIEKRIKKEDDPAEDHLENSSSPETVNKFNQNTK 182
Query: 191 PMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKA 250
Q+SSSA+ S + E +N AE +GKSDLW+PLN LVEVA+R++S KS + S+AK
Sbjct: 183 --QNSSSAEASLFAPNNEAENGAESWDGKSDLWQPLNCLVEVANRSKSFKSIQV-SDAKQ 239
Query: 251 EPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDS 310
E T +NE QV KTK KE+K K + ++ NN D T S+ PKRLRRIRRK AA FGDS
Sbjct: 240 EATQGHENEPQVRKTKFKEEKLKVE--DEKNNID-TPSDAAGPKRLRRIRRKKAANFGDS 296
Query: 311 NISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQK 370
IS QAVL+AA +E+R GP+WFSLVASEDQ G PLPQI ++YLRIKD N+PVSFIQK
Sbjct: 297 GISSQAVLNAASVNHEKRAGPVWFSLVASEDQEGDAPLPQIPANYLRIKDGNLPVSFIQK 356
Query: 371 YLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMV 430
YL KLDL SE+EVEIKCMGQPV+PTL LYNL+D W+QTASTS+RV IGS + V
Sbjct: 357 YLKKKLDLASEAEVEIKCMGQPVVPTLLLYNLIDQWVQTASTSERVTTSIGSRKRSNVSF 416
Query: 431 L 431
L
Sbjct: 417 L 417
>gi|224066301|ref|XP_002302072.1| predicted protein [Populus trichocarpa]
gi|222843798|gb|EEE81345.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/429 (63%), Positives = 326/429 (75%), Gaps = 5/429 (1%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
++ VVKV+RETIAACMTC +CN LLRDATTISECLHTFCRKCIY +IS+E ++ CP+CNI
Sbjct: 9 HHQVVKVRRETIAACMTCLLCNKLLRDATTISECLHTFCRKCIYRRISNEGLDSCPICNI 68
Query: 70 DLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPV-RRKERSLSSLVVSAP 128
+LGCVPLEKLRPDH LQDVR+KIFP K+RKV+APE SV LPV RRKERSLSSLVV P
Sbjct: 69 NLGCVPLEKLRPDHNLQDVRSKIFPYKKRKVEAPEVAESVALPVTRRKERSLSSLVVCTP 128
Query: 129 RVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQN 188
+VS TT T RR+ RKAAALRG+N S +KP KE VED+ + +SSPETL K +QN
Sbjct: 129 KVSTHTTTTGRRTKPFPRKAAALRGTNFSIEKPNNKEHVPVEDSPESSSSPETLKKPNQN 188
Query: 189 VKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEA 248
+K Q+S +PSQP E +N E +GKSDLW+PLNFLVEVA+RT+S KS+ ++A
Sbjct: 189 IK--QNSPCTEPSQP-DPDEAENGTEPRDGKSDLWQPLNFLVEVANRTKSFKSSPQLNDA 245
Query: 249 KAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFG 308
K+E + DNE + +TK K +K KSK ++ NN D + + PKRLRRIR+K A
Sbjct: 246 KSESRPVHDNEPRALRTKFKGNKDKSKVKDEKNNIDNVSEGPVEPKRLRRIRQKRAVFNN 305
Query: 309 DSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFI 368
S IS AVLD A AK ERR+G +WFSL+ASE Q G PLPQI SSYLR+KD N+PVSFI
Sbjct: 306 ISGISSPAVLDTAAAKQERRSGTVWFSLLASE-QEGEAPLPQIPSSYLRLKDGNVPVSFI 364
Query: 369 QKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFV 428
QKYLM KLDL SE+EVEI+CMG+PVIPTL LYNLVD WLQT +++VP G SAKD+V
Sbjct: 365 QKYLMKKLDLASEAEVEIRCMGRPVIPTLLLYNLVDQWLQTVPKTEQVPVTAGFSAKDYV 424
Query: 429 MVLTYARKV 437
MVL YARKV
Sbjct: 425 MVLAYARKV 433
>gi|449530319|ref|XP_004172143.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 430
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/427 (62%), Positives = 327/427 (76%), Gaps = 4/427 (0%)
Query: 11 NLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNID 70
N VVKVKRE IAAC+TCP+CN LL++ATTISECLHTFCRKCI DKISDEEIE CPVCNID
Sbjct: 3 NRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEEIENCPVCNID 62
Query: 71 LGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRV 130
LGC PLEKLRPDH L+D+RAKIFP KRRKVK PE P V PVRRKERSLSSLVV++PRV
Sbjct: 63 LGCAPLEKLRPDHNLEDLRAKIFPSKRRKVKTPEVAPVVLPPVRRKERSLSSLVVNSPRV 122
Query: 131 SAQTTMTRRRSNAAARKAAA-LRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
S+ T T RR+ AAA + A+ LR +S++K KKE+DSV+D + +SS ET +K +QN
Sbjct: 123 SSHATTTGRRTAAAAARIASILRTPRVSSEKRVKKEDDSVDDRSESSSSFETSDKFNQNK 182
Query: 190 KPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAK 249
+ SS + + P+ SKE +N E D+WKPLN LVEVA+R++ KSNS G E K
Sbjct: 183 R--TDSSPTKSTIPLRSKETENGVNSVERNLDIWKPLNCLVEVANRSKCSKSNSQGFETK 240
Query: 250 AEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGD 309
E +EAQ K++N+E K K K N DP + ET PK+LRR+R+K + +GD
Sbjct: 241 VEAAEANGSEAQARKSRNREGKRKQKRENGKTRADPVSPETEKPKKLRRVRQKRESFYGD 300
Query: 310 SNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQ 369
S+++PQ VLDA+ A++E + GPIW SL+AS DQ G + LPQI + YLRIKDRN+PVSF+Q
Sbjct: 301 SSLTPQVVLDASSARHEIKAGPIWLSLIAS-DQEGDVSLPQIPAKYLRIKDRNLPVSFVQ 359
Query: 370 KYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVM 429
KYLM KLDLPSESEVE+KCMG PV+PTL L++LVDLWLQTASTS+++PA IGSSA+DF+M
Sbjct: 360 KYLMRKLDLPSESEVEVKCMGHPVVPTLDLHSLVDLWLQTASTSEKIPASIGSSAEDFIM 419
Query: 430 VLTYARK 436
VL YARK
Sbjct: 420 VLYYARK 426
>gi|449455272|ref|XP_004145377.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449474218|ref|XP_004154108.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 430
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/427 (62%), Positives = 327/427 (76%), Gaps = 4/427 (0%)
Query: 11 NLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNID 70
N VVKVKRE IAAC+TCP+CN LL++ATTISECLHTFCRKCI DKISDEEIE CPVCNID
Sbjct: 3 NRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEEIENCPVCNID 62
Query: 71 LGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRV 130
LGC PLEKLRPDH L+D+RAKIFP KRRKVK PE P V PVRRKERSLSSLVV++PRV
Sbjct: 63 LGCAPLEKLRPDHNLEDLRAKIFPSKRRKVKTPEVAPVVLPPVRRKERSLSSLVVNSPRV 122
Query: 131 SAQTTMTRRRSNAAARKAAA-LRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
S+ T T RR+ AAA + A+ LR +S++K KKE+DSV+D + +SS ET +K +QN
Sbjct: 123 SSHATTTGRRTAAAAARIASILRTPRVSSEKRVKKEDDSVDDRSESSSSFETSDKFNQNK 182
Query: 190 KPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAK 249
+ SS + + P+ SKE +N E D+WKPLN LVEVA+R++ KSNS G E K
Sbjct: 183 R--TDSSPTKSTIPLRSKETENGVNSVERNLDIWKPLNCLVEVANRSKCSKSNSQGFETK 240
Query: 250 AEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGD 309
E +EAQ K++N+E K K K N DP + ET PK+LRR+R+K + +GD
Sbjct: 241 VEAAEANGSEAQASKSRNREGKRKQKRENGKTRADPVSPETEKPKKLRRVRQKRESFYGD 300
Query: 310 SNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQ 369
S+++PQ VLDA+ A++E + GPIW SL+AS DQ G + LPQI + YLRIKDRN+PVSF+Q
Sbjct: 301 SSLTPQVVLDASSARHEIKAGPIWLSLIAS-DQEGDVSLPQIPAKYLRIKDRNLPVSFVQ 359
Query: 370 KYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVM 429
KYLM KLDLPSESEVE+KCMG PV+PTL L++LVDLWLQTASTS+++PA IGSSA+DF+M
Sbjct: 360 KYLMRKLDLPSESEVEVKCMGHPVVPTLDLHSLVDLWLQTASTSEKIPASIGSSAEDFIM 419
Query: 430 VLTYARK 436
VL YARK
Sbjct: 420 VLYYARK 426
>gi|225453016|ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
Length = 449
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 259/447 (57%), Positives = 317/447 (70%), Gaps = 30/447 (6%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VVKV+RETIAACMTCP+CN LL++ATTIS CLHTFCRKCIY+K+SDEE++CCPVCNIDLG
Sbjct: 5 VVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLG 64
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
CVP++KLRPDH LQD+RAKIFP KRRK PE +P + LPV+RKERSLSSLVVS PRVS
Sbjct: 65 CVPVDKLRPDHNLQDIRAKIFPFKRRKTSVPEVMPPIPLPVKRKERSLSSLVVSTPRVSM 124
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
QT +T RR+ A ARK+ ALRGS+ S +P KKEEDSVED + +SSPE+ NK++Q K
Sbjct: 125 QTGLTGRRTKAVARKSTALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKVAQTKKQN 184
Query: 193 QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLG------- 245
S S A Q +K+ +NDA+ +GK DLW PLN LVE A+RT+S K NS G
Sbjct: 185 SSISEASKDQK-PNKDTENDADPWDGKVDLWTPLNCLVEAANRTKSSKFNSQGTSLAKSE 243
Query: 246 -------------SEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNN----PDPTTS 288
++AKAEP D E + KTK KE K K + N P P
Sbjct: 244 PFNAPDSEVYMPKTKAKAEPLNAADGEVCIPKTKIKEHGHKIKVQDDKNGAALLPGP--- 300
Query: 289 ETINPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPL 348
+ +R+R + RK +A G+ Q VL AAGAK RRN PIWFSLVASE+Q G+ PL
Sbjct: 301 --VKRRRMRAVGRKRISASGEMCTPAQVVLSAAGAKRGRRNCPIWFSLVASENQGGNGPL 358
Query: 349 PQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQ 408
+I + YLR+KD N+PVSFIQKYL+ KLDL +E+EVEI+C G+ V+PTLQL LV+LWL+
Sbjct: 359 SKIPAYYLRVKDGNLPVSFIQKYLVKKLDLTNEAEVEIRCQGEAVVPTLQLQKLVELWLR 418
Query: 409 TASTSDRVPAMIGSSAKDFVMVLTYAR 435
TASTS RV +G+SAK+FVMVLTY R
Sbjct: 419 TASTSKRVATSVGTSAKEFVMVLTYTR 445
>gi|296087924|emb|CBI35207.3| unnamed protein product [Vitis vinifera]
Length = 425
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/428 (59%), Positives = 315/428 (73%), Gaps = 16/428 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VVKV+RETIAACMTCP+CN LL++ATTIS CLHTFCRKCIY+K+SDEE++CCPVCNIDLG
Sbjct: 5 VVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLG 64
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
CVP++KLRPDH LQD+RAKIFP KRRK PE +P + LPV+RKERSLSSLVVS PRVS
Sbjct: 65 CVPVDKLRPDHNLQDIRAKIFPFKRRKTSVPEVMPPIPLPVKRKERSLSSLVVSTPRVSM 124
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
QT +T RR+ A ARK+ ALRGS+ S +P KKEEDSVED + +SSPE+ NK++Q K
Sbjct: 125 QTGLTGRRTKAVARKSTALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKVAQTKKQN 184
Query: 193 QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLG-SEAKAE 251
S S A Q +K+ +NDA+ +GK DLW PLN LVE A+RT+S K NS G S AK+E
Sbjct: 185 SSISEASKDQK-PNKDTENDADPWDGKVDLWTPLNCLVEAANRTKSSKFNSQGTSLAKSE 243
Query: 252 PTTITDNEAQV----HKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAF 307
P D+E ++ HK K ++DK N + +R+R + RK +A
Sbjct: 244 PFNAPDSETKIKEHGHKIKVQDDK----------NGAALLPGPVKRRRMRAVGRKRISAS 293
Query: 308 GDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSF 367
G+ Q VL AAGAK RRN PIWFSLVASE+Q G+ PL +I + YLR+KD N+PVSF
Sbjct: 294 GEMCTPAQVVLSAAGAKRGRRNCPIWFSLVASENQGGNGPLSKIPAYYLRVKDGNLPVSF 353
Query: 368 IQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDF 427
IQKYL+ KLDL +E+EVEI+C G+ V+PTLQL LV+LWL+TASTS RV +G+SAK+F
Sbjct: 354 IQKYLVKKLDLTNEAEVEIRCQGEAVVPTLQLQKLVELWLRTASTSKRVATSVGTSAKEF 413
Query: 428 VMVLTYAR 435
VMVLTY R
Sbjct: 414 VMVLTYTR 421
>gi|390627638|gb|AEY75223.2| putative E3 ubiquitin protein ligase DRIP2 [Vigna unguiculata]
Length = 433
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/428 (59%), Positives = 309/428 (72%), Gaps = 6/428 (1%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+V+VKR+ IAACMTCP+CN L++AT IS CLHTFCRKCIYDKI+DEE+E CPVCNIDLG
Sbjct: 6 LVRVKRDAIAACMTCPLCNKFLKEATAISLCLHTFCRKCIYDKITDEELENCPVCNIDLG 65
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
VPLEK+RPDH LQD+R KIFP +RK KA A+PSV LP RRKERSLSSLVVS PRVS
Sbjct: 66 IVPLEKMRPDHNLQDLRNKIFPFNKRKQKAAVAIPSVLLPARRKERSLSSLVVSTPRVST 125
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
Q+TMT RR+ RKA L+GS S +K KKEE+ +ED +D + SP+T NK +++
Sbjct: 126 QSTMTGRRTK-PTRKALGLQGSGFSVEKLIKKEEELLEDRQDSSCSPDTSNKSAKSAG-- 182
Query: 193 QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAEP 252
QS S + SQ I ++ N AE E K DLWK LN+L E ASR++S KSN S AK E
Sbjct: 183 QSLSPCKNSQSICNRGLQNGAETQEAKWDLWKTLNYLAEAASRSKSFKSNVQASNAKPES 242
Query: 253 TTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSNI 312
+ D + +V K K KE+K K+K ++ + D + +T P +LRR+R K AFG+S I
Sbjct: 243 VKVNDTDTKVLKAKIKENKRKAKVADEKISTDHVSPDTAKPNKLRRVRPKKEHAFGESRI 302
Query: 313 SPQAVLDAAGAKYERRNGPIWFSL--VASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQK 370
SPQAVLDA + N IWFSL ASE+Q G PLPQI SSY+RIKD +IPVSFIQK
Sbjct: 303 SPQAVLDANDSNL-LWNDSIWFSLSASASENQEGDAPLPQIPSSYVRIKDGSIPVSFIQK 361
Query: 371 YLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMV 430
LM KL L SE EVEIKCMG PV+P+LQ+ NLV+LWL TAST R+PA IGSS KDFVM+
Sbjct: 362 LLMKKLGLKSEDEVEIKCMGHPVLPSLQVQNLVELWLDTASTGHRIPATIGSSGKDFVMI 421
Query: 431 LTYARKVR 438
LTY RKV+
Sbjct: 422 LTYGRKVQ 429
>gi|297822773|ref|XP_002879269.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297325108|gb|EFH55528.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 420
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/429 (59%), Positives = 314/429 (73%), Gaps = 17/429 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
++V KVKRET+ ACMTC +C LLRDATTISECLHTFCRKCIY+KI+++EIECCPVC+I
Sbjct: 3 GDMVAKVKRETVVACMTCSLCEKLLRDATTISECLHTFCRKCIYEKITEDEIECCPVCDI 62
Query: 70 DLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPR 129
DLG PLEKLRPDH LQD+RAK+FPLKR++ +APE V S+TLP RRKERS+SSLVVS PR
Sbjct: 63 DLGGTPLEKLRPDHILQDLRAKLFPLKRKRERAPEVVSSITLPARRKERSISSLVVSTPR 122
Query: 130 VSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
VSAQ T +R+ AA RK +RGS T + KKEE+ +D+ + ASSPET+ K +QN
Sbjct: 123 VSAQAGTTGKRTKAATRK--DVRGSGSFTKRTVKKEEEFGDDHIESASSPETVKKFTQN- 179
Query: 190 KPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAK 249
+ SS A+P+Q +S++ + E + K LWKPLNFLV+VA+ T+ + K
Sbjct: 180 --KRQSSYAEPNQSLSNRRNKDVDEPWDSKLHLWKPLNFLVDVANGTK---------DPK 228
Query: 250 AEPTTITDNEAQVHKTKNKEDKCKSKSGNK-NNNPDPTTSETINPKRLRRIRRKTAAAFG 308
+E + N+ Q KTK K+ K K K + NNN DPT SET K RR RRK ++ FG
Sbjct: 229 SEHGNASHNDVQGSKTKTKDHKRKCKLEEEINNNGDPTISETATLKGTRRTRRKRSSNFG 288
Query: 309 DSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFI 368
DS I P + AA K ERRNG +WFSLVAS +Q G LPQI ++YLRIKD NIPVSFI
Sbjct: 289 DSRIPP--LPGAASLKQERRNGHVWFSLVASNNQEGEASLPQIPANYLRIKDGNIPVSFI 346
Query: 369 QKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFV 428
QKYLM KLDL SE+EVEIKCMG+PVIPTLQL++LV+LWL+T S RV A IGSSAK+FV
Sbjct: 347 QKYLMRKLDLKSEAEVEIKCMGEPVIPTLQLHSLVELWLETTSKHQRVAASIGSSAKEFV 406
Query: 429 MVLTYARKV 437
MVL Y+RK+
Sbjct: 407 MVLVYSRKL 415
>gi|449442949|ref|XP_004139243.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449483021|ref|XP_004156472.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 451
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/447 (55%), Positives = 312/447 (69%), Gaps = 23/447 (5%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV+VKRE + ACMTCP+CN LL++ATTIS CLHTFCRKCIY+K+SD+E++CCPVC+IDLG
Sbjct: 5 VVRVKREILEACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDDEVDCCPVCDIDLG 64
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C+P+EKLRPDH LQD+RAKIFPLKRRK+ APE P +LPV+RKERSLSSLVV+ P+VS
Sbjct: 65 CLPVEKLRPDHNLQDIRAKIFPLKRRKICAPEISPLASLPVKRKERSLSSLVVNTPKVSM 124
Query: 133 QT-TMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKP 191
Q+ +T RRS R AAALR N T++P KKEEDS ED+ +SS + L + +
Sbjct: 125 QSGGLTGRRSKNVGRTAAALRRCNFGTEEPLKKEEDSGEDHTTSSSSSDYLKNVRFRQR- 183
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSE-AKA 250
Q SS +PS + + N+ E EGK+DLW PLN LVE A+RT+S K N GS AK
Sbjct: 184 RQDSSMPEPSNSLRHEHLKNNVEAVEGKADLWTPLNCLVEAANRTKSTKLNFQGSSMAKL 243
Query: 251 EPTTITDNEAQVHKTK-------------------NKEDKCKSKSGNKNNNPDPTTSETI 291
EP+ + D + +TK NKE K+ + +NN + ET+
Sbjct: 244 EPSNVADGDVDAEETKEKALSLGAPNYGLFMPKARNKEHGSNPKAKDNHNNGTASLPETM 303
Query: 292 NPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQI 351
KRLR R AAA + + Q VLDA+ AK RRN PIWF+L+ASED++G PLPQI
Sbjct: 304 KRKRLRATARNKAAASAELSSPAQLVLDASAAKC-RRNSPIWFTLIASEDRKGGFPLPQI 362
Query: 352 SSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTAS 411
S+ YLRIKD +PVS IQKYL+ KLDL SE+EVEI C GQPV+PT QL NLVDLW +TAS
Sbjct: 363 STPYLRIKDGKMPVSSIQKYLVKKLDLKSEAEVEILCRGQPVLPTQQLQNLVDLWFRTAS 422
Query: 412 TSDRVPAMIGSSAKDFVMVLTYARKVR 438
T+ + PA +GSSAKDFVMVL+Y RKV+
Sbjct: 423 TAKKTPASVGSSAKDFVMVLSYCRKVQ 449
>gi|147844369|emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]
Length = 662
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/441 (57%), Positives = 313/441 (70%), Gaps = 30/441 (6%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VVKV+RETIAACMTCP+CN LL++ATTIS CLHTFCRKCIY+K+SDEE++CCPVCNIDLG
Sbjct: 5 VVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLG 64
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
CVP++KLRPDH LQD+RAKIFP KRRK+ P+ +P + LPV+RKERSLSSLVVS PRVS
Sbjct: 65 CVPVDKLRPDHNLQDIRAKIFPFKRRKISVPQVMPPIPLPVKRKERSLSSLVVSTPRVSM 124
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
QT +T RR+ A ARK+ ALRGS+ S +P KKEEDSVED + +SSPE+ NK++Q K
Sbjct: 125 QTGLTGRRTKAVARKSTALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKVAQTKKQN 184
Query: 193 QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLG------- 245
S S A Q +K+ +NDA+ +GK DLW PLN LVE A+RT+S K NS G
Sbjct: 185 SSISEASKDQK-PNKDTENDADPWDGKVDLWTPLNCLVEAANRTKSSKFNSQGTSLAKSE 243
Query: 246 -------------SEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNN----PDPTTS 288
++AKAEP D E + KTK KE K K + N P P
Sbjct: 244 PFNAPDSEVYMPKTKAKAEPLNAADGEVCIPKTKIKEHGHKIKVQDDKNGAALLPGP--- 300
Query: 289 ETINPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPL 348
+ +R+R + RK +A G+ Q VL AAGAK RRN PIWFSLVASE+Q G+ PL
Sbjct: 301 --VKRRRMRAVGRKRISASGEMCTPAQVVLSAAGAKRGRRNCPIWFSLVASENQGGNGPL 358
Query: 349 PQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQ 408
+I + YLR+KD N+PVSFIQKYL+ KLDL +E+EVEI+C G+ V+PTLQL LV+LWL+
Sbjct: 359 SKIPAYYLRVKDGNLPVSFIQKYLVKKLDLTNEAEVEIRCQGEAVVPTLQLQKLVELWLR 418
Query: 409 TASTSDRVPAMIGSSAKDFVM 429
TASTS RV +G+SAK+FVM
Sbjct: 419 TASTSKRVATSVGTSAKEFVM 439
>gi|18402394|ref|NP_565702.1| E3 ubiquitin protein ligase DRIP2 [Arabidopsis thaliana]
gi|75306338|sp|Q94AY3.1|DRIP2_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP2; AltName:
Full=DREB2A-interacting protein 2
gi|15010634|gb|AAK73976.1| At2g30580/T6B20.7 [Arabidopsis thaliana]
gi|20198328|gb|AAB63079.2| putative C3HC4 zinc finger protein [Arabidopsis thaliana]
gi|23308209|gb|AAN18074.1| At2g30580/T6B20.7 [Arabidopsis thaliana]
gi|330253317|gb|AEC08411.1| E3 ubiquitin protein ligase DRIP2 [Arabidopsis thaliana]
Length = 420
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/429 (59%), Positives = 313/429 (72%), Gaps = 17/429 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
++V KVKRET+ ACMTCP+C+ LLRDATTISECLHTFCRKCIY+KI+++EIE CPVC+I
Sbjct: 3 GDMVAKVKRETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDI 62
Query: 70 DLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPR 129
DLG PLEKLRPDH LQD+RAK+FPLKR+K +APE V S++LP +RKERS+SSLVVS PR
Sbjct: 63 DLGGTPLEKLRPDHILQDLRAKLFPLKRKKERAPEVVSSISLPAKRKERSISSLVVSTPR 122
Query: 130 VSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
VSAQ T +R+ AA RK +RGS T + KKEE+ +D+ + ASSPETL K +QN
Sbjct: 123 VSAQAGTTGKRTKAATRK--DVRGSGSFTKRTVKKEEEFGDDHVESASSPETLKKFTQN- 179
Query: 190 KPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAK 249
+ SS A P+Q +S++ + E + K LWKPLNFLV+VA+ T+ + K
Sbjct: 180 --KRQSSYANPNQSLSNRRNKDVDEPWDSKLHLWKPLNFLVDVANGTK---------DPK 228
Query: 250 AEPTTITDNEAQVHKTKNKEDKCKSKSGNK-NNNPDPTTSETINPKRLRRIRRKTAAAFG 308
+E + N+ Q KTK K+ K K K + +NN DPTTSET KR RR RRK ++ FG
Sbjct: 229 SELGNASHNDVQGSKTKTKDHKRKCKLEEEISNNGDPTTSETATLKRTRRTRRKRSSTFG 288
Query: 309 DSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFI 368
DS I + AA K ERRNG +WFSLVAS +Q G LPQI ++YLRI+D NIPVSFI
Sbjct: 289 DSRIP--LLPGAASLKQERRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFI 346
Query: 369 QKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFV 428
QKYLM KLDL SE EVEI CMG+PVIPTLQL++LVDLWL+T S RV A IGSSAK+FV
Sbjct: 347 QKYLMRKLDLKSEDEVEITCMGEPVIPTLQLHSLVDLWLETTSKHQRVAASIGSSAKEFV 406
Query: 429 MVLTYARKV 437
MVL Y+RK+
Sbjct: 407 MVLVYSRKL 415
>gi|42561762|ref|NP_172162.3| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
gi|302595925|sp|Q9M9Y4.2|DRIP1_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP1; AltName:
Full=DREB2A-interacting protein 1
gi|332189912|gb|AEE28033.1| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
Length = 421
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/429 (58%), Positives = 312/429 (72%), Gaps = 16/429 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
+++KVK+ET+ AC++C IC+ +LRDATTISECLHTFCRKCIY+KI+++EIE CPVCNIDL
Sbjct: 1 MMIKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDL 60
Query: 72 GCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVS 131
G PLEKLRPDH LQD+RAKIF LKRRKVKAP V +LP +RKERS+SSLVVS P VS
Sbjct: 61 GSTPLEKLRPDHNLQDLRAKIFALKRRKVKAPGIV---SLPGKRKERSISSLVVSTPMVS 117
Query: 132 AQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKP 191
AQ TRRR+ A RK LR +L+ ++ KKEE S ++ + SSP+TLNK +QN +
Sbjct: 118 AQAGTTRRRTKAPTRKE--LRNGSLA-ERTVKKEESSGDELLESTSSPDTLNKFTQNKR- 173
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSN-SLGSEAKA 250
QS S + S IS+KE + E + K D WKPLNFLVEVA+ T+ LKS+ S GS +K+
Sbjct: 174 -QSKKSCKES--ISNKENKDGDEPWDSKMD-WKPLNFLVEVANGTKPLKSSASQGSGSKS 229
Query: 251 EPTTITDNEAQ-VHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRK-TAAAFG 308
E ++ N+ Q + + + +K+NN DPTTSET+ PKR+R +RK +A G
Sbjct: 230 EHANVSRNQFQGSKTKTKNKKRKCKREDDKSNNGDPTTSETVTPKRMRTTQRKRSATTLG 289
Query: 309 DSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFI 368
DS PQ D + AK ERRNGP+WFSLVAS DQ G LPQI +++LRI+D N VSFI
Sbjct: 290 DSRNLPQP--DESSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFI 347
Query: 369 QKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFV 428
QKYLM KLDL SE+E+EIKCMG+ VIPTL LYNLVDLWLQ +S R A++GSSAKDF
Sbjct: 348 QKYLMRKLDLESENEIEIKCMGEAVIPTLTLYNLVDLWLQKSSNHQRFAALVGSSAKDFT 407
Query: 429 MVLTYARKV 437
MVL YARK+
Sbjct: 408 MVLVYARKL 416
>gi|224123440|ref|XP_002319079.1| predicted protein [Populus trichocarpa]
gi|222857455|gb|EEE95002.1| predicted protein [Populus trichocarpa]
Length = 430
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/446 (55%), Positives = 305/446 (68%), Gaps = 42/446 (9%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
VKV+R+ + ACMTCP+CN LL++ATTIS CLH+FCRKCIY+K+SDEE++CCPVCNIDLGC
Sbjct: 6 VKVQRQVLEACMTCPLCNKLLKEATTISLCLHSFCRKCIYEKLSDEEVDCCPVCNIDLGC 65
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
+P+EKLRPDH LQD+RAK+FP KRRKV APE +PS+ LP +RKERSLSSLVVS P+V Q
Sbjct: 66 LPVEKLRPDHNLQDIRAKVFPFKRRKVNAPEIMPSIALPAKRKERSLSSLVVSTPKVPIQ 125
Query: 134 TTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPMQ 193
+T RRS A ARKAAALRG N + ++ K+EDS EDN M
Sbjct: 126 NGLTGRRSKAGARKAAALRGCNFTVEE--SKKEDSAEDNP------------------MS 165
Query: 194 SSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLG-------- 245
SS P + I + D+D E EGK+DLW PLN LVE A+RT+S KS+S G
Sbjct: 166 PSSPGSPVKSIQKRRLDDDVEIIEGKADLWTPLNCLVEAANRTKSSKSHSQGLSLVKSGM 225
Query: 246 ------------SEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINP 293
++++AE NE + KTKNKE + + N + ++
Sbjct: 226 LDDPDCEPHLYETKSRAESPGGHHNEVYMSKTKNKEHG-QGIGVQDDKNGKNSLPISVKR 284
Query: 294 KRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISS 353
+RL R++ A + G S S QA++DAAGAK RRNGPIWFSLVASEDQ+ LPQIS+
Sbjct: 285 RRLTAARKRAALSEGLS-ASAQAMIDAAGAKSNRRNGPIWFSLVASEDQKEDASLPQIST 343
Query: 354 SYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTS 413
YLRIKD +PVSFIQKYL+ KLDL SE+EVEI C GQPV PTL L NLVDLW +T STS
Sbjct: 344 CYLRIKDGKMPVSFIQKYLVKKLDLDSETEVEILCRGQPVGPTLPLQNLVDLWFRTGSTS 403
Query: 414 DRVPAMIGSSAKDFVMVLTYARKVRD 439
+VPA +GSSAKDFVMVL+Y RKV++
Sbjct: 404 KKVPASVGSSAKDFVMVLSYCRKVQE 429
>gi|297848954|ref|XP_002892358.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338200|gb|EFH68617.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/428 (58%), Positives = 316/428 (73%), Gaps = 15/428 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
+++KVK+ET+ AC +CP+C+ +LRDATTISECLHTFCRKCIY+KI+++EIE CPVCNIDL
Sbjct: 2 VMIKVKKETMRACFSCPLCDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDL 61
Query: 72 GCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVS 131
G PLEKLRPDH LQD+RAKIFPLKRRKVKAP + SV +RKERS+SSLVVS PR+S
Sbjct: 62 GGTPLEKLRPDHNLQDLRAKIFPLKRRKVKAP-GIASVL--AKRKERSISSLVVSTPRLS 118
Query: 132 AQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKP 191
AQ T RR+ AA RK LR +L+ ++ KKEE S ++ +G SSP+TLNK +QN +
Sbjct: 119 AQAGTTGRRTKAATRKE--LRNGSLA-ERRVKKEESSGDELLEGTSSPDTLNKFTQNKRH 175
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSN-SLGSEAKA 250
++ S + S+KE + E + K D WKPLNFLVEVA+RT+ LKS+ S GS +K+
Sbjct: 176 LKKSCK----ESFSNKENKDGDEPWDSKLD-WKPLNFLVEVANRTKPLKSSASQGSGSKS 230
Query: 251 EPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRK-TAAAFGD 309
E + N+ Q KTK K+ K K K ++ +N DPTTSET PKR+R +RK +A GD
Sbjct: 231 EHANASHNQFQGSKTKTKDKKRKCKREDEKSNGDPTTSETTTPKRMRTAQRKRSATTLGD 290
Query: 310 SNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQ 369
S PQ D + AK ERRNGP+WFSLVAS DQ G LPQ+ +++LRI+D NIPVSFIQ
Sbjct: 291 SRNLPQP--DESSAKQERRNGPVWFSLVASSDQEGGTSLPQVPANFLRIRDGNIPVSFIQ 348
Query: 370 KYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVM 429
KYLM KLDL SE+E+E++CMG+ VIPTL L+ +VDLWLQ +S R A IGSSAKDF+M
Sbjct: 349 KYLMRKLDLESETEIEVRCMGEAVIPTLTLHKVVDLWLQKSSKHQRFAASIGSSAKDFMM 408
Query: 430 VLTYARKV 437
VL YARK+
Sbjct: 409 VLDYARKL 416
>gi|356535179|ref|XP_003536126.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 450
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/456 (54%), Positives = 315/456 (69%), Gaps = 34/456 (7%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
M S+ LV KVKR+T+ CMTCP+C+ +DATTIS CLHTFCRKCIY+K+SDEE +CCPV
Sbjct: 1 MVSSQLV-KVKRDTLRPCMTCPLCHNFFKDATTISTCLHTFCRKCIYEKLSDEETDCCPV 59
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVS 126
CNIDLGC+P+EKLRPDH L D+RAKIFP KR+K+KA E + S++LP +RKERSLSSLVVS
Sbjct: 60 CNIDLGCLPVEKLRPDHNLHDIRAKIFPFKRKKIKAQEVLSSISLPAKRKERSLSSLVVS 119
Query: 127 APRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLS 186
AP+VS Q T +R+ + RKAAALRG + D+ KKE+ + +DN + P++ N S
Sbjct: 120 APKVSMQPGFTGKRTKNSTRKAAALRGCSFLLDESIKKEQANGDDNMVCSILPDSSNMTS 179
Query: 187 QNVKPMQSSSSAQPSQPISSKE-KDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNS-- 243
+N Q SS +PS+ E +N+ E EGK DLW PLN LVE A+RT+S +SNS
Sbjct: 180 ENES--QDSSMPEPSKKHKPHEDTENNVEHTEGKVDLWTPLNCLVEAANRTKSSRSNSQA 237
Query: 244 ------------LGSEAKAEPTTITD------NEAQVHKTKNKEDKCKSKSG-NKNNNPD 284
G + +E TT TD +E + K+KNK+ K+ G +K+ N
Sbjct: 238 TPLAKLESPTTPHGGQDTSETTTKTDLPASAKSELNIPKSKNKDTGHKTIFGDDKDANSL 297
Query: 285 PTTSETINPKRLRRIR---RKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASED 341
P+ P + RR+R +K AA S SP A LD G K R+N PIWFSLVASED
Sbjct: 298 PS-----GPGKRRRLRPAGQKRVAASEMSASSP-APLDTTGGKCNRKNSPIWFSLVASED 351
Query: 342 QRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYN 401
Q+G +PLPQIS+ YLRIKD +PVSFIQKYL+ KL+L E+EVEI C GQPV+P+LQL+N
Sbjct: 352 QKGDVPLPQISACYLRIKDGAVPVSFIQKYLVKKLNLACEAEVEIMCRGQPVLPSLQLHN 411
Query: 402 LVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYARKV 437
LVDLW +TASTS ++PA +GSSAKDFVMVL+Y RK
Sbjct: 412 LVDLWFRTASTSKKIPASVGSSAKDFVMVLSYCRKA 447
>gi|356576708|ref|XP_003556472.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 433
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/452 (54%), Positives = 310/452 (68%), Gaps = 43/452 (9%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
M S++ VVKVKR+T+ CMTCP+C+ +DATTIS CLHTFCRKCIY+K+SDEE++CCPV
Sbjct: 1 MVSSSQVVKVKRDTLRPCMTCPLCHKFFKDATTISLCLHTFCRKCIYEKLSDEEMDCCPV 60
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVS 126
C+IDLGC+P+EKLRPDH L D+RAKIFP KR+K+KA E + S++LP +RKERSLSSLVVS
Sbjct: 61 CHIDLGCLPVEKLRPDHNLHDIRAKIFPFKRKKIKAQEVLSSISLPAKRKERSLSSLVVS 120
Query: 127 APRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLS 186
AP+VS Q T +R+ + RKAAALRG + D+ KKE+ + +DN D SP + + S
Sbjct: 121 APKVSMQPGFTGKRTKNSTRKAAALRGCSFLLDESIKKEQTNGDDNMD---SP--MPEHS 175
Query: 187 QNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNS--- 243
+ KP + + +N + EGK DLW PLN LVE A+RT+S +SNS
Sbjct: 176 KKHKPHE--------------DTENSVQHTEGKVDLWTPLNCLVEAANRTKSSRSNSQAT 221
Query: 244 -----------LGSEAKAEPTTITD------NEAQVHKTKNKEDKCKSKSG-NKNNNPDP 285
G + +E TT TD +E + K+KNK+ K G +K+ N P
Sbjct: 222 PLAKLESPTTPHGGQDASETTTKTDLPASAQSELNIPKSKNKDTGLKPIFGDDKDANSLP 281
Query: 286 TTSETINPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGS 345
S + +RLR +K AA S SP A LDA G K R+N PIWFSLVASEDQ+G
Sbjct: 282 --SGPVKRRRLRPAGQKRVAASEMSASSP-APLDATGGKCNRKNSPIWFSLVASEDQKGD 338
Query: 346 LPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDL 405
PLPQIS+ YLRIKD +PVSFIQKYLM KL+L SE+EVEI C GQPV+P+LQL+NLVDL
Sbjct: 339 FPLPQISACYLRIKDGTVPVSFIQKYLMKKLNLASEAEVEIMCGGQPVLPSLQLHNLVDL 398
Query: 406 WLQTASTSDRVPAMIGSSAKDFVMVLTYARKV 437
W +TASTS ++PA +GSSAKDFVMVL+Y RK
Sbjct: 399 WFRTASTSKKIPASVGSSAKDFVMVLSYCRKA 430
>gi|255580929|ref|XP_002531283.1| ring finger protein, putative [Ricinus communis]
gi|223529116|gb|EEF31096.1| ring finger protein, putative [Ricinus communis]
Length = 445
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/447 (57%), Positives = 310/447 (69%), Gaps = 29/447 (6%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VVKVKRE I ACMTCP+CN LLRDATTIS CLHTFCRKCIY+K+SDEE +CCPVC+IDLG
Sbjct: 5 VVKVKREIIEACMTCPLCNKLLRDATTISLCLHTFCRKCIYEKLSDEEGDCCPVCDIDLG 64
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C+P+EKLRPDH LQD+RAKIFPLKRRK++APE +PS+ LP +RKERSLSSLVVS P+V
Sbjct: 65 CLPVEKLRPDHNLQDIRAKIFPLKRRKIRAPEVMPSIALPAKRKERSLSSLVVSTPKVPM 124
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
QT T RR+ A ARK LR N + D+ KK EDS+ED+ +SSPE+ + QN +
Sbjct: 125 QTGFTGRRTKAGARKLVPLR-CNFTADESNKK-EDSLEDHPMSSSSPESPIGVVQNKR-- 180
Query: 193 QSSSSAQPSQPISSKEK-DNDAEQCEGKSDLWKPLNFLVEVASRTR---------SLKSN 242
Q SS +P KE ++D E EGK+DLW PLN LVE A+R++ SL +
Sbjct: 181 QDSSVGEPPNTQRFKEDLEDDVEIIEGKADLWTPLNCLVEAANRSKSSKSNSQGPSLPKS 240
Query: 243 SL-----------GSEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETI 291
L G + +AE +E + KTKNKE SK + N D +
Sbjct: 241 ELLSGPDGDSQLPGIKFRAESPNGHVSEVYMPKTKNKEHGPDSKVQDDKNGTDLLHASV- 299
Query: 292 NPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQI 351
KR R RK AA + + S + +LDAAGAK RRN PIWFSLVASEDQ+G LPQI
Sbjct: 300 --KRRRLTARKRAAMSEEFSASARVMLDAAGAKNNRRNCPIWFSLVASEDQKGDASLPQI 357
Query: 352 SSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTAS 411
S+ YLRIKD +PVSFIQKYL+ KLDL SE+EVEI C GQ V+PTLQL+NLVDLW +TAS
Sbjct: 358 SAGYLRIKDGKMPVSFIQKYLVKKLDLTSEAEVEIMCRGQSVLPTLQLHNLVDLWFRTAS 417
Query: 412 TSDRVPAMIGSSAKDFVMVLTYARKVR 438
S +VPA +GSSAKDFVMVL+Y RKV+
Sbjct: 418 -SKKVPASVGSSAKDFVMVLSYNRKVQ 443
>gi|363814591|ref|NP_001242770.1| uncharacterized protein LOC100778462 [Glycine max]
gi|255635223|gb|ACU17966.1| unknown [Glycine max]
Length = 443
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/415 (58%), Positives = 299/415 (72%), Gaps = 4/415 (0%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+VKVKR+ IAACMTCP+CN ++AT IS CLHTFCRKCIYDKI+DEE+E CPVCNIDLG
Sbjct: 6 LVKVKRDAIAACMTCPLCNKFPKEATAISLCLHTFCRKCIYDKIADEELENCPVCNIDLG 65
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
VPLEK+RPD+ LQD+R KIFP K+RK KAP +V S LP RRKERSLSSLVVS PRV
Sbjct: 66 IVPLEKMRPDNILQDLRNKIFPFKKRKEKAPVSVSSALLPARRKERSLSSLVVSTPRVCT 125
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
Q+TMT RR+ ARKA+ L+GS+ S +K KKEE+ +ED++D + SP+T NK ++N
Sbjct: 126 QSTMTGRRTK-PARKASGLQGSSFSIEKLIKKEEELLEDHQDNSCSPDTSNKSAKNGG-- 182
Query: 193 QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAEP 252
QS S + SQ I ++E N AE E K DLWK LN+L E ASR++ KSN S+AK E
Sbjct: 183 QSLSPCKNSQSICNREPQNGAEPHEAKWDLWKTLNYLAEAASRSKPFKSNVQASDAKLES 242
Query: 253 TTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSNI 312
+TD++A+V K K KE K K+K ++ D +S+T P +LRR+R + FG+S I
Sbjct: 243 MKVTDSDAKVLKAKIKEKKRKAKVEDEKIITDHVSSDTAKPNKLRRVRPRKEPVFGESRI 302
Query: 313 SPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYL 372
SPQAVLDA N IWFSL ASE+Q G PLPQI S+Y+RIK+ +IPVSFIQK L
Sbjct: 303 SPQAVLDATDRNL-LWNDSIWFSLAASENQEGDAPLPQIPSNYVRIKNGSIPVSFIQKLL 361
Query: 373 MMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDF 427
M KL L SE EVEIKCMG PV+P+LQ+ NLVD WL A++ R+PA IGSS K F
Sbjct: 362 MKKLGLNSEDEVEIKCMGHPVLPSLQVQNLVDSWLDMAASGHRIPATIGSSGKRF 416
>gi|356500137|ref|XP_003518890.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
DRIP2-like [Glycine max]
Length = 450
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/422 (58%), Positives = 302/422 (71%), Gaps = 5/422 (1%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
M + +V+VKR+ IAACMTCP+C L++AT IS CLHTFCRKCIYDKI+DEE+E CPV
Sbjct: 1 MMTMKRLVRVKRDAIAACMTCPLCKKFLKEATAISLCLHTFCRKCIYDKITDEELENCPV 60
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVS 126
CNIDLG VPLEK+RPD+ LQD+R KIFP K+RK KAP +V SV LP RRKERSLSSLVVS
Sbjct: 61 CNIDLGIVPLEKMRPDNILQDLRNKIFPFKKRKEKAPVSVSSVLLPARRKERSLSSLVVS 120
Query: 127 APRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLS 186
PRV Q+TMT RR+ ARKA+ L+GS+LS +K KKEE+ +ED++D SP+T NK +
Sbjct: 121 TPRVCTQSTMTGRRTK-PARKASGLQGSSLSIEKFIKKEEELLEDHQDNLCSPDTSNKSA 179
Query: 187 QNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGS 246
+N QS S + SQ I ++E N AE E K DLWK LN+L E ASR++ KSN S
Sbjct: 180 KNGG--QSLSPCKNSQSICNREPQNGAEPQEAKWDLWKTLNYLAEAASRSKPFKSNVQAS 237
Query: 247 EAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAA 306
+AK E +TD++A+V K K KE K K+K + + D +S+T P +LRR+R+K
Sbjct: 238 DAKLESMKMTDSDAKVLKAKIKEKKRKAKVEEEKISTDHASSDTSKPNKLRRVRQKKEPV 297
Query: 307 FGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVS 366
FG+S ISPQAVLDA N IWFSL ASE+Q G PLPQI S+Y+RIK+ +IPVS
Sbjct: 298 FGESRISPQAVLDATDRNL-LWNDSIWFSLAASENQEGDAPLPQIPSNYVRIKNGSIPVS 356
Query: 367 FIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLW-LQTASTSDRVPAMIGSSAK 425
FIQK LM KL L SE EVEIKCMG PV+P+LQ+ NLVDLW + TAS R+ A IGSS
Sbjct: 357 FIQKLLMKKLGLKSEDEVEIKCMGHPVLPSLQVQNLVDLWGVDTASLGHRISATIGSSGX 416
Query: 426 DF 427
F
Sbjct: 417 RF 418
>gi|297737160|emb|CBI26361.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/427 (55%), Positives = 296/427 (69%), Gaps = 10/427 (2%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V KV RE +AACMTC ICN L DATTISECLHTFCRKCI+DKI+++E++ CPVCN +LG
Sbjct: 51 VAKVPRERLAACMTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLG 110
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C PLEKLRPDH LQD+ AKIFP ++ KV A E V SV LP RRKERSLSSL VS PRVS+
Sbjct: 111 CAPLEKLRPDHNLQDLTAKIFPSEKSKVVATEEVASVPLPARRKERSLSSLGVSTPRVSS 170
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
QT MT +R+ +AAR+ +A R S ++P KKEED E+ SSPE LNK +QN K +
Sbjct: 171 QTVMTGKRTKSAARRLSAARESTFPVEEPIKKEEDYPEN----PSSPEILNKRAQNKKNL 226
Query: 193 -QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
++ SSA+ S+ +K K+ ++E + K D+WKPLN LVE S T+S K N GS AK+
Sbjct: 227 KENYSSAESSKQHINKGKEENSETLKEKDDMWKPLNCLVEACSGTKSNKLNLQGSLAKST 286
Query: 252 PTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSN 311
P+ + D EA V K K KE + K K ++ N S ++ P R+R R+K AA +
Sbjct: 287 PSHVDDKEAHVPKAKLKE-RGKLKFQDEENGTTHVPSGSVKP-RIRGGRQKKAATPEGFS 344
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
I P + +K R P+WFSLVAS++Q G PLPQI SSYLR++D ++PVSF+QKY
Sbjct: 345 I-PALAENDGNSKCNIRACPVWFSLVASDNQEGDAPLPQIPSSYLRMRDGHLPVSFLQKY 403
Query: 372 LMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTA--STSDRVPAMIGSSAKDFVM 429
L+ KL L SESEVEI GQPV+PTLQL +LVDLW Q A +TS+ IGSSAK+FVM
Sbjct: 404 LVQKLHLNSESEVEITLRGQPVVPTLQLQSLVDLWFQAAAPTTSEATQPPIGSSAKEFVM 463
Query: 430 VLTYARK 436
VL+Y RK
Sbjct: 464 VLSYGRK 470
>gi|359477378|ref|XP_002280186.2| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
Length = 429
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/427 (55%), Positives = 296/427 (69%), Gaps = 10/427 (2%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V KV RE +AACMTC ICN L DATTISECLHTFCRKCI+DKI+++E++ CPVCN +LG
Sbjct: 6 VAKVPRERLAACMTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLG 65
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C PLEKLRPDH LQD+ AKIFP ++ KV A E V SV LP RRKERSLSSL VS PRVS+
Sbjct: 66 CAPLEKLRPDHNLQDLTAKIFPSEKSKVVATEEVASVPLPARRKERSLSSLGVSTPRVSS 125
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
QT MT +R+ +AAR+ +A R S ++P KKEED E+ SSPE LNK +QN K +
Sbjct: 126 QTVMTGKRTKSAARRLSAARESTFPVEEPIKKEEDYPEN----PSSPEILNKRAQNKKNL 181
Query: 193 -QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
++ SSA+ S+ +K K+ ++E + K D+WKPLN LVE S T+S K N GS AK+
Sbjct: 182 KENYSSAESSKQHINKGKEENSETLKEKDDMWKPLNCLVEACSGTKSNKLNLQGSLAKST 241
Query: 252 PTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSN 311
P+ + D EA V K K KE + K K ++ N S ++ P R+R R+K AA +
Sbjct: 242 PSHVDDKEAHVPKAKLKE-RGKLKFQDEENGTTHVPSGSVKP-RIRGGRQKKAATPEGFS 299
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
I P + +K R P+WFSLVAS++Q G PLPQI SSYLR++D ++PVSF+QKY
Sbjct: 300 I-PALAENDGNSKCNIRACPVWFSLVASDNQEGDAPLPQIPSSYLRMRDGHLPVSFLQKY 358
Query: 372 LMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTA--STSDRVPAMIGSSAKDFVM 429
L+ KL L SESEVEI GQPV+PTLQL +LVDLW Q A +TS+ IGSSAK+FVM
Sbjct: 359 LVQKLHLNSESEVEITLRGQPVVPTLQLQSLVDLWFQAAAPTTSEATQPPIGSSAKEFVM 418
Query: 430 VLTYARK 436
VL+Y RK
Sbjct: 419 VLSYGRK 425
>gi|224131246|ref|XP_002328491.1| predicted protein [Populus trichocarpa]
gi|222838206|gb|EEE76571.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/434 (55%), Positives = 297/434 (68%), Gaps = 40/434 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+VKVKRE + ACMTCP+CN LL++ATTI CLHTFCRKCIY+K+SDEE++CCPVCN++LG
Sbjct: 5 IVKVKREILEACMTCPLCNKLLKEATTIFSCLHTFCRKCIYEKLSDEEVDCCPVCNMNLG 64
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C+P++KLR DH LQD+RAKIFP KRRKVKAPE +PS+ LP +RKERSLSSLVVS +V
Sbjct: 65 CLPVDKLRADHNLQDIRAKIFPFKRRKVKAPEIIPSIALPAKRKERSLSSLVVSTSKVPI 124
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
QT +T RRS A ARKAAALRG + + ++ K EDS +DN SP VK +
Sbjct: 125 QTGLTGRRSKAGARKAAALRGCSFTVEE--SKNEDSAKDNLSSPGSP---------VKSI 173
Query: 193 Q----SSSSAQPS--QPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGS 246
Q SS A+PS Q + +D+D + EGK+DLW PLN LVE A+RT+S
Sbjct: 174 QKRRLDSSVAEPSTEQRPNDDGEDDDVQMIEGKADLWTPLNCLVEAANRTKS-------- 225
Query: 247 EAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAA 306
N+ + KTKN+ + +KN T S ++ KR R + AA
Sbjct: 226 ----------SNDIYMAKTKNEHGQGIRVLDDKNG----TNSLPVSVKRRRLTAAQKRAA 271
Query: 307 FGDS-NISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPV 365
+ S QA++DAA AK RRNGPIWFSLVASEDQ+ LPQIS+ YLRI+D +PV
Sbjct: 272 MSEGLGASAQAMVDAAAAKSNRRNGPIWFSLVASEDQKRDASLPQISACYLRIQDGKMPV 331
Query: 366 SFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAK 425
SFIQKYL+ KLDL SE+EVEI C GQPV PTL+L NLV+LW T STS +V A +GSSAK
Sbjct: 332 SFIQKYLVKKLDLGSETEVEIMCRGQPVSPTLRLQNLVNLWFCTGSTSKKVSASVGSSAK 391
Query: 426 DFVMVLTYARKVRD 439
DFVMVL+Y RKV++
Sbjct: 392 DFVMVLSYCRKVQE 405
>gi|255551951|ref|XP_002517020.1| ring finger protein, putative [Ricinus communis]
gi|223543655|gb|EEF45183.1| ring finger protein, putative [Ricinus communis]
Length = 434
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/442 (50%), Positives = 293/442 (66%), Gaps = 20/442 (4%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
M + VVKV+RE + CMTCP+CN L RDATTISECLHTFCRKCIY KI+DEE + CPV
Sbjct: 1 MTTTRQVVKVEREKLETCMTCPLCNKLFRDATTISECLHTFCRKCIYRKITDEEFDNCPV 60
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAP-------EAVPSVTLPVRRKERS 119
CNIDLGC PLEKLR DH+L+D++ K FP KR+K KAP E VPSV LP RRKE S
Sbjct: 61 CNIDLGCSPLEKLRADHSLEDLKTKFFPSKRQKAKAPAVMPLVPEPVPSVLLPARRKEIS 120
Query: 120 LSSLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSP 179
LSSLVVS P+VS+++ + R+R A ARK ALR S L + K ++ + SSP
Sbjct: 121 LSSLVVSTPKVSSKSVLPRKRLKAIARKNPALRESILIEESIKK-----LDRLHESLSSP 175
Query: 180 ETLNKLSQNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSL 239
ET+ K++Q+++ Q+SS Q K+ ++ AE CE K+DLWKPLNFLVEVA++++
Sbjct: 176 ETITKIAQSIR--QNSSPDSSKQHKKEKDAEDSAEPCESKADLWKPLNFLVEVANKSKLT 233
Query: 240 KSNSLGSEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNN---PDPTTSETINPKRL 296
K N + + + +NE KN +D N N N P P+ S ++ ++
Sbjct: 234 KLNPQDTLVQMQLPDPAENEPD-EVVKNNDDHGNRSKANGNANELVPSPSKS-SVKTRKS 291
Query: 297 RRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYL 356
+ +R++ AA S + +AV DA+ +K PIWFSL+AS DQ+ PLPQI+S YL
Sbjct: 292 QGLRQRRAAELEGSTVPAKAVTDAS-SKCCGEFSPIWFSLIASNDQKVDAPLPQITSCYL 350
Query: 357 RIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRV 416
R+KD ++PVSFI+KYL+ KL L SE+EVEI G+PV+ TL L N+VD WL+ A TS+R+
Sbjct: 351 RVKDGSLPVSFIKKYLVQKLGLNSEAEVEIGLQGKPVVSTLPLQNIVDWWLKMAPTSERI 410
Query: 417 PAMIGSSAKDFVMVLTYARKVR 438
+GSSAKDFVMVL+Y RK +
Sbjct: 411 QTTVGSSAKDFVMVLSYGRKAQ 432
>gi|224111060|ref|XP_002315733.1| predicted protein [Populus trichocarpa]
gi|222864773|gb|EEF01904.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/428 (51%), Positives = 284/428 (66%), Gaps = 18/428 (4%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VVKV+RE IAACMTCP+CN L RDATTISECLHTFCRKCIY KI+DEE++ CPVC+ +LG
Sbjct: 6 VVKVQREEIAACMTCPLCNKLFRDATTISECLHTFCRKCIYKKITDEELDSCPVCDTELG 65
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C PLEKLR DH+ QD+RAKIF R+K K PE V V ERSLSSLVVS P+ S
Sbjct: 66 CSPLEKLRADHSWQDLRAKIFLSNRKKAKEPETVSLVP----EDERSLSSLVVSTPKKSV 121
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
++ +T +RS ARK R S + + KK V+D + SSPETL+K++Q K
Sbjct: 122 KSFLTGKRSKPIARK----RESPVLIKELVKK----VDDYYESLSSPETLSKIAQT-KRQ 172
Query: 193 QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAEP 252
SS++ P Q +K ++ + C+GK+D WKPLN VE +S+T+S KS E +
Sbjct: 173 NSSTAESPKQHKPNKVSEDGVKPCKGKADFWKPLNCSVEGSSKTKSNKSEL--QEILVQI 230
Query: 253 TTITDNE-AQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSN 311
+ E AQ KT KE KSK + +N S ++ +RL+ +++K AA N
Sbjct: 231 KKLDAQEKAQSLKTSVKEHGDKSKVNGEESNSTSWPSVSVKSRRLQGMQQKRAAPSEGLN 290
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASE-DQRGSLPLPQISSSYLRIKDRNIPVSFIQK 370
I Q ++D A +K + R PIWFSLVAS+ +Q GS PLPQISS YLR+KD ++PVS+I+K
Sbjct: 291 IPAQTIVD-ANSKCDTRLSPIWFSLVASDHEQGGSAPLPQISSCYLRVKDGSLPVSYIKK 349
Query: 371 YLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMV 430
YL KL L E+EVEI GQPV+ TLQL+NLVD WLQTAS S+R+ +GSSAKDFVMV
Sbjct: 350 YLAQKLGLVREAEVEISMRGQPVVSTLQLHNLVDWWLQTASASERIRTTVGSSAKDFVMV 409
Query: 431 LTYARKVR 438
L+Y RK
Sbjct: 410 LSYGRKAH 417
>gi|108709971|gb|ABF97766.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|222625413|gb|EEE59545.1| hypothetical protein OsJ_11819 [Oryza sativa Japonica Group]
Length = 510
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/424 (52%), Positives = 276/424 (65%), Gaps = 18/424 (4%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
V VKRE +A CMTCP+C LLRDATT+SECLHTFCRKCIY+K++DEE+E CPVC IDLGC
Sbjct: 97 VMVKRELLARCMTCPLCGRLLRDATTVSECLHTFCRKCIYEKLNDEEVESCPVCKIDLGC 156
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
P+EKLR DH LQDVR+KIFP KR+K+ A E V LP +RKERS+SSLVV P V+
Sbjct: 157 TPVEKLRADHNLQDVRSKIFPFKRKKISADEVAAPVLLPSKRKERSISSLVVDTPTVTP- 215
Query: 134 TTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPMQ 193
T +T RR+ A RKAAALRG D P KKE D+ E + +S P L K+ Q + M
Sbjct: 216 TGLTGRRTRAVTRKAAALRGLGPGIDDPVKKEIDNGEKHAQNSSLPTNLGKVPQTRRQM- 274
Query: 194 SSSSAQPSQPISSKEKDNDAEQCEGKSD-LWKPLNFLVEVASRTRSLKSNSLGSEAKAEP 252
SS+A+ S S+K+ + D + K+D LW+PLN LVE A+RT+S +S+S K E
Sbjct: 275 -SSNAEASNHSSNKDTEGDRKDLADKTDELWRPLNCLVEAANRTKSSRSSSQSPFVKREQ 333
Query: 253 TTITDNEAQVHKTKNKEDKCKSK-SGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSN 311
+ + V+KTK++E KSK +K + P + K R RR+ A DS
Sbjct: 334 LSDSPGSTSVNKTKSREYMQKSKIEDDKKDVP------LLKRKNQRTGRRRELHAQSDSK 387
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
+AA + E++ IWFSLVAS +Q G PLPQI S YLRIKD NIP S IQKY
Sbjct: 388 P------EAAATQNEKKFSSIWFSLVASFEQEGDPPLPQIPSHYLRIKDGNIPASSIQKY 441
Query: 372 LMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVL 431
LM KL LP+E+EVEI C GQPV PT L NLV++WL+ ST MIGS AK+FVMVL
Sbjct: 442 LMQKLGLPNEAEVEINCCGQPVNPTQPLCNLVEVWLRGRSTQT-TQTMIGSPAKEFVMVL 500
Query: 432 TYAR 435
TY R
Sbjct: 501 TYGR 504
>gi|147772496|emb|CAN60778.1| hypothetical protein VITISV_032146 [Vitis vinifera]
Length = 391
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/427 (51%), Positives = 275/427 (64%), Gaps = 47/427 (11%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V KV RE +AACMTC ICN L DATTISECLHTFCRKCI+DKI+++E++ CPVCN +LG
Sbjct: 5 VAKVPRERLAACMTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLG 64
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C PLEKLRPDH LQD+ AKIFP ++ KV APE V SV LP RRKERSLSSL VS PRVS+
Sbjct: 65 CAPLEKLRPDHNLQDLTAKIFPSEKSKVVAPEEVASVPLPARRKERSLSSLGVSTPRVSS 124
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
QT MT +R+ +AAR+ +A R S ++P KKEED E+ SSPE LNK +QN K +
Sbjct: 125 QTVMTGKRTKSAARRLSAARESTFPVEEPIKKEEDYPEN----PSSPEILNKRAQNKKNL 180
Query: 193 -QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
++ SSA+ SSK+ N GS AK+
Sbjct: 181 KENYSSAE-----SSKQHINK--------------------------------GSLAKST 203
Query: 252 PTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSN 311
P+ + D EA V K K KE + K K ++ N S ++ P R+R R+K AA +
Sbjct: 204 PSHVDDKEAHVPKAKLKE-RGKLKFQDEENGTTHVPSGSVKP-RIRGGRQKKAATPEGFS 261
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
I P + +K R P+WFSLVAS++Q G PLPQI SSYLR++D ++PVSF+QKY
Sbjct: 262 I-PALAENDGNSKCNIRACPVWFSLVASDNQEGDAPLPQIPSSYLRMRDGHLPVSFLQKY 320
Query: 372 LMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTA--STSDRVPAMIGSSAKDFVM 429
L+ KL L SESEVEI GQPV+PTLQL +LVDLW Q A +TS+ IGSSAK+FVM
Sbjct: 321 LVQKLHLNSESEVEITLRGQPVVPTLQLQSLVDLWFQAAAPTTSEATQPPIGSSAKEFVM 380
Query: 430 VLTYARK 436
VL+Y RK
Sbjct: 381 VLSYGRK 387
>gi|357115770|ref|XP_003559659.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 502
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/427 (50%), Positives = 270/427 (63%), Gaps = 20/427 (4%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV V+RE +A CMTCP+CN LLRDATTISECLHTFCR+CIY K +DEE+E CPVC IDLG
Sbjct: 86 VVMVRRELLARCMTCPLCNRLLRDATTISECLHTFCRRCIYQKFNDEEVESCPVCKIDLG 145
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C P+EKLR DH+L DVR+KIFP KR+K+KA + ++LP +RKERS+SSLVV P++ A
Sbjct: 146 CTPVEKLRADHSLHDVRSKIFPFKRKKIKAEDVATPISLPSKRKERSISSLVVPTPKL-A 204
Query: 133 QTTMTRRRSNAAARK-AAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKP 191
T +T RR+ A RK AAALRG ++ P KKE D + + +S P L K + +
Sbjct: 205 PTGLTGRRTRAVTRKAAAALRGLGPNSGNPVKKENDISDKHAHSSSLPANLGKAPKTRR- 263
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
Q SS+A+ S S KD + ++LW+PLN LVE A+RT+S +S+ K E
Sbjct: 264 -QISSNAEASN--HSSNKDAEDSDMADNAELWRPLNCLVEAANRTKSFRSSLHSPVIKRE 320
Query: 252 PTTITDNEAQVHKTKNKEDKCKSK-SGNKNNNPDPTTSETINP--KRLRRIRRKTAAAFG 308
+ N +KTK++E K K NK N P P R RR R A
Sbjct: 321 QINESPNSTYGNKTKSREHLQKPKIEDNKKNAPVSPVIVKRKPGTGRRRRALRIPADGMP 380
Query: 309 DSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFI 368
+ ++P E+R IWFSLVAS +Q+G PLPQI S YLRIKD N+P S I
Sbjct: 381 EGEVTPN----------EKRFNSIWFSLVASFEQKGDPPLPQIPSHYLRIKDANVPASSI 430
Query: 369 QKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFV 428
QKYLM KL LPSESEVEI C GQ V PT L NLV+LW++ ST AMIGSSA++FV
Sbjct: 431 QKYLMQKLSLPSESEVEINCCGQLVNPTQPLRNLVELWVRGRSTQT-TQAMIGSSAEEFV 489
Query: 429 MVLTYAR 435
MVLTY R
Sbjct: 490 MVLTYGR 496
>gi|326507272|dbj|BAJ95713.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 521
Score = 363 bits (932), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 211/427 (49%), Positives = 275/427 (64%), Gaps = 18/427 (4%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+V VKRE +A CMTCP+CN LLRDATT+SECLHTFCRKCIY K +DEE+E CPVCNIDLG
Sbjct: 103 LVMVKRELLARCMTCPLCNRLLRDATTVSECLHTFCRKCIYKKFNDEEVESCPVCNIDLG 162
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C P+EKLR DH+L DVR+KIFP KR+K+KA + + P +RKERS+SSLVV PR++
Sbjct: 163 CTPVEKLRADHSLHDVRSKIFPFKRKKIKAEDVASPDSPPNKRKERSISSLVVHTPRLTP 222
Query: 133 QTTMTRRRSNAAARK-AAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKP 191
T T RR+ RK AAAL G + D P KKE + + + +S P L K+ + +
Sbjct: 223 -TGSTGRRTKVVTRKAAAALHGLAPTVDNPVKKE--NSDKSAHSSSLPANLGKVPKTKRQ 279
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
+ S++ + S S+K+ ++D++ ++LW+PLN LVE A+RT+S +S+ GS K E
Sbjct: 280 ILSNAE-EASNCSSNKDTEDDSKDMADNAELWRPLNCLVEAANRTKSFRSSLQGSGVKRE 338
Query: 252 PTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKT---AAAFG 308
+ + +KT KE K K+ + N + P + T+ K RR++ A A G
Sbjct: 339 QLNGSPSSTNGNKTNPKEHPKKPKTEDDNKD-APVPAVTLKRKLKGAGRRRSGLRAPADG 397
Query: 309 DSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFI 368
D D A + E+R IWFSLVAS +Q+G PLPQI S YLRIKD NIP S I
Sbjct: 398 DP--------DGALKQNEKRFNCIWFSLVASLEQKGDSPLPQIPSHYLRIKDANIPASSI 449
Query: 369 QKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFV 428
QKYL+ KL LPSESEVEI C GQPV PT L NLV+LWL+ S A++GS A++FV
Sbjct: 450 QKYLVQKLSLPSESEVEINCCGQPVNPTQPLRNLVELWLRGRSPQ-ATQAIVGSPAEEFV 508
Query: 429 MVLTYAR 435
MVL Y R
Sbjct: 509 MVLNYGR 515
>gi|414871833|tpg|DAA50390.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 526
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 209/433 (48%), Positives = 270/433 (62%), Gaps = 21/433 (4%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV VKR+ +A CMTCP+C LLRDATTISECLHTFCRKCIY K DEE+ECCPVC IDLG
Sbjct: 99 VVMVKRDLLARCMTCPLCRRLLRDATTISECLHTFCRKCIYQKFDDEEVECCPVCKIDLG 158
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRV-- 130
C P EKLR DH+LQDVR+K+FP KR+K+ A E S++LP + KERS+SSLVV P+V
Sbjct: 159 CTPTEKLRADHSLQDVRSKLFPFKRKKINAEEVSSSISLPTKIKERSISSLVVDTPKVKP 218
Query: 131 ----SAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLS 186
+T R++ A A L + P KKE DS + + ++ P + +K
Sbjct: 219 TGLTGRRTRAVARKAAAVATATVTLHELRPVIEDPVKKEIDSCDSHPHDSNLPASSSKAP 278
Query: 187 QNVKPMQSSSSAQPSQPISSKEKDNDA-EQCEGKSDLWKPLNFLVEVASRTRSLKSNSLG 245
Q + Q S + + S S+K+ + D+ ++ KS+LW+PLN LVE A+RT+S +S+S
Sbjct: 279 QIRR--QISPNVEASNRSSNKDTEGDSNDELADKSELWRPLNCLVEAANRTKSFRSSSQS 336
Query: 246 SEAKAEPTTITDNEAQVHKTKNKEDKCKSK-SGNKNNNPDPTTSETINPKRLRR--IRRK 302
K E + + K K +E+ KSK +K + P P + PKR + R+K
Sbjct: 337 PVVKGEQPNGSTSSTFASKAKARENLEKSKIQDDKKDVPMP----PVLPKRRAQGTARKK 392
Query: 303 TAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRN 362
+++ P DAA A+ ++ IWFSL+AS DQ+G PLPQI S YLRIKD N
Sbjct: 393 RDRLQAPTDVKP----DAAVAQNAKKFSSIWFSLIASFDQQGDPPLPQIPSHYLRIKDGN 448
Query: 363 IPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGS 422
IP S I KYLM KL LPSESEVEIKC QPV P+ L NLV+LWL+ +T M GS
Sbjct: 449 IPASSILKYLMQKLSLPSESEVEIKCCEQPVNPSQPLRNLVELWLKGRATQT-TQTMTGS 507
Query: 423 SAKDFVMVLTYAR 435
SAK+FVMVLTY R
Sbjct: 508 SAKEFVMVLTYGR 520
>gi|125537292|gb|EAY83780.1| hypothetical protein OsI_38996 [Oryza sativa Indica Group]
gi|125579972|gb|EAZ21118.1| hypothetical protein OsJ_36761 [Oryza sativa Japonica Group]
Length = 470
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 206/425 (48%), Positives = 275/425 (64%), Gaps = 20/425 (4%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV VKRE +A CMTCP+C +LRDATT+SECLHTFCRKCIY KI+DEE+E CPVC IDLG
Sbjct: 60 VVMVKRELLARCMTCPLCRRILRDATTVSECLHTFCRKCIYKKINDEELEHCPVCKIDLG 119
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C PLEKLR DH +QDVR+KIFPLKR+KV A E + P +RKERS+SSLVV+ P ++
Sbjct: 120 CAPLEKLRADHNIQDVRSKIFPLKRKKVNAEEVESPIAPPAKRKERSISSLVVNTPEITP 179
Query: 133 QTTMTRRRSNAAARK-AAALRGSNLSTDKPP-KKEEDSVEDNEDGASSPETLNKLSQNVK 190
+ ++T RR+ A+ RK AAALR +L PP KK+ D+ N D +S ++L+K+ Q +
Sbjct: 180 K-SLTGRRTRASTRKSAAALR--DLGPIIPPVKKDSDNTNKNADNSSLLDSLSKVPQTRR 236
Query: 191 PMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKA 250
Q S+A+ S SSK+K D + KS+LW+PLN LVE AS+T+S +S+ S A+
Sbjct: 237 --QVLSNAETSSHPSSKDKGGDDKD-LDKSELWRPLNCLVEAASKTKSYRSS---SAARG 290
Query: 251 EPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDS 310
T + + A +TK +E KSK ++ P + K R R+
Sbjct: 291 NQPTESPSSANASRTKAREYLLKSKVQDEKKE-VPVATVPFKRKGPGRGRKPAQPPA--- 346
Query: 311 NISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQK 370
AV + +K+E+ P+WFSL+AS DQ+G+ PLPQI + YLRIKD N+P S IQK
Sbjct: 347 ----AAVSSHSASKHEKLLTPVWFSLIASFDQKGAPPLPQIPTHYLRIKDDNMPASSIQK 402
Query: 371 YLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMV 430
Y+M KL LPSE+EVEI C GQPV P L NL++ WL+ + ++GSS D+VMV
Sbjct: 403 YIMQKLSLPSETEVEISCCGQPVNPIQPLRNLIERWLRFGPART-LQTVVGSSGGDYVMV 461
Query: 431 LTYAR 435
++Y R
Sbjct: 462 ISYGR 466
>gi|293331779|ref|NP_001168287.1| uncharacterized LOC100382051 [Zea mays]
gi|223947229|gb|ACN27698.1| unknown [Zea mays]
gi|414877923|tpg|DAA55054.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 486
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 264/431 (61%), Gaps = 18/431 (4%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A ++ V VKRE + C+TCP+C+ LLR ATTISECLHTFCRKCIY K++DE+++ CPVC
Sbjct: 65 AGDSAVAMVKRELLTRCLTCPLCDHLLRQATTISECLHTFCRKCIYKKLNDEDLDHCPVC 124
Query: 68 NIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSA 127
IDLGC P+EKLR DH +QDVR+K FP KR+KV A EA + LPV+ KERS+SSLVV+
Sbjct: 125 KIDLGCTPVEKLRADHNIQDVRSKFFPFKRKKVNAEEAESPIMLPVKVKERSISSLVVNT 184
Query: 128 PRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQ 187
PRV+ +T RR+ A RKAAALRG P KK+ D+ D +S ++LNK+ Q
Sbjct: 185 PRVTP-AALTGRRTRAVTRKAAALRGLGPIIVDPLKKDNDNPNKQTDNSSLLDSLNKIPQ 243
Query: 188 NVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSE 247
+ Q S+ + +S K+K D + + KS+ WKPLN LVE AS+T+ L S +
Sbjct: 244 TRR--QLLSNGDTTSHLSVKDKAGDNKDLD-KSEFWKPLNCLVEAASKTKPLTSAPRPAL 300
Query: 248 AKAEP-TTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAA 306
+P + + + +TK +E KSK+ ++P P + +R++
Sbjct: 301 KGDKPRKSPSSDSEHSSRTKTREPLQKSKAEVDKSDPGP----------IVMLRKRGRPG 350
Query: 307 FGDSNISPQAVLDAAGAKYERRNG--PIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIP 364
N P+ D+ + R PIWFSL+AS DQ+G PLPQI + YLRIKD +IP
Sbjct: 351 RKRKNPLPETNADSTATAIQARKALSPIWFSLIASFDQKGVPPLPQIPAHYLRIKDGSIP 410
Query: 365 VSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSA 424
S IQKY++ KL L SESEVEI C GQ V P + NLV+ WL+ + +IGSS
Sbjct: 411 ASSIQKYIVQKLSLLSESEVEISCCGQTVNPGQPVRNLVERWLRVGPARP-LHTVIGSSG 469
Query: 425 KDFVMVLTYAR 435
D+VMV++Y R
Sbjct: 470 GDYVMVISYGR 480
>gi|212274729|ref|NP_001130541.1| uncharacterized protein LOC100191640 [Zea mays]
gi|194689428|gb|ACF78798.1| unknown [Zea mays]
gi|223949863|gb|ACN29015.1| unknown [Zea mays]
gi|414868842|tpg|DAA47399.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 476
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 199/435 (45%), Positives = 271/435 (62%), Gaps = 34/435 (7%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A ++ V VKRE +A C+TCP+C+ LLR ATTISECLHTFCR CIY+KI+DE+++ CPVC
Sbjct: 63 AGDSSVAMVKRELLARCLTCPLCDRLLRKATTISECLHTFCRNCIYNKINDEDLDHCPVC 122
Query: 68 NIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSA 127
IDLGC P++KLR DH +QDVR+K+FP KR+KV A EA + LPV+ KERS+SSLVV+
Sbjct: 123 KIDLGCTPVDKLRADHNIQDVRSKVFPFKRKKVNAEEAESPIMLPVKVKERSISSLVVNT 182
Query: 128 PRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQ 187
PRV+ + T RR+ RKAAALRG P KK+ D+ D +S ++L+K+ Q
Sbjct: 183 PRVTPAAS-TGRRTRVVTRKAAALRGLGPIIVDPLKKDNDNSNKQTDNSSLLDSLSKIPQ 241
Query: 188 NVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSL---KSNSL 244
+ + S+ S P S K+K +D + + KS+LWKPLN LVE AS+T+ L +S +L
Sbjct: 242 TRRQLLSNGDTS-SHP-SVKDKADDNKDFD-KSELWKPLNCLVEAASKTKPLTSAQSPAL 298
Query: 245 GSEAKAEPTTITDNEAQVHKTKNK-EDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKT 303
E + P++ +TK K ED NK+++P+P + +R++
Sbjct: 299 KGEFRESPSS-----EHFSRTKVKVED-------NKSDDPEP----------IVLLRKRG 336
Query: 304 AAAFGDSNISPQ--AVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDR 361
N P+ A A + + PIWFSL+AS DQ+G+ PLPQI + YLRIKD
Sbjct: 337 RPGRKRKNPLPETNAASTATAIQARKAFSPIWFSLIASFDQKGNPPLPQIPAHYLRIKDG 396
Query: 362 NIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQ-LYNLVDLWLQTASTSDRVPAMI 420
+IP S IQKY+M KL L SESEVEI C GQ V Q + NLV+ WL+ + +I
Sbjct: 397 SIPASSIQKYIMQKLSLVSESEVEISCCGQTVGNLGQPVRNLVERWLRVGPARP-LHTVI 455
Query: 421 GSSAKDFVMVLTYAR 435
GSS D+VMV++Y R
Sbjct: 456 GSSGGDYVMVISYGR 470
>gi|218193362|gb|EEC75789.1| hypothetical protein OsI_12718 [Oryza sativa Indica Group]
Length = 458
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 198/394 (50%), Positives = 248/394 (62%), Gaps = 18/394 (4%)
Query: 44 LHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAP 103
L CRKCIY+K++DEE+E CPVC IDLGC P+EKLR DH LQDVR+KIFP KR+K+ A
Sbjct: 75 LQHVCRKCIYEKLNDEEVESCPVCKIDLGCTPVEKLRADHNLQDVRSKIFPFKRKKISAD 134
Query: 104 EAVPSVTLPVRRKERSLSSLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPK 163
E V LP +RKERS+SSLVV P V+ T +T RR+ A RKAAALRG D P K
Sbjct: 135 EVAAPVLLPSKRKERSISSLVVDTPTVTP-TGLTGRRTRAVTRKAAALRGLGPGIDDPVK 193
Query: 164 KEEDSVEDNEDGASSPETLNKLSQNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSD-L 222
KE D+ E + +S P L K+ Q + M SS+A+ S S+K+ + D + K+D L
Sbjct: 194 KEIDNGEKHAQNSSLPTNLGKVPQTRRQM--SSNAEASNHSSNKDTEGDRKDLADKTDEL 251
Query: 223 WKPLNFLVEVASRTRSLKSNSLGSEAKAEPTTITDNEAQVHKTKNKEDKCKSK-SGNKNN 281
W+PLN LVE A+RT+S +S+S K E + + V+KTK++E KSK +K +
Sbjct: 252 WRPLNCLVEAANRTKSSRSSSQSPIVKREQLSDSPGSTSVNKTKSREYMQKSKIEDDKKD 311
Query: 282 NPDPTTSETINPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASED 341
P + K R RR+ A DS +AA + E++ IWFSLVAS +
Sbjct: 312 VP------LLKRKNQRTGRRRELHAQSDSKP------EAAATQNEKKFSSIWFSLVASFE 359
Query: 342 QRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYN 401
Q G PLPQI S YLRIKD NIP S IQKYLM KL LP+E+EVEI C GQPV PT L N
Sbjct: 360 QEGDPPLPQIPSHYLRIKDGNIPASSIQKYLMQKLGLPNEAEVEINCCGQPVNPTQPLCN 419
Query: 402 LVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYAR 435
LV++WL+ ST MIGS AK+FVMVLTY R
Sbjct: 420 LVEVWLRGRSTQT-TQTMIGSPAKEFVMVLTYGR 452
>gi|53370662|gb|AAU89157.1| Zinc finger, C3HC4 type (RING finger) containing protein [Oryza
sativa Japonica Group]
Length = 537
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/373 (51%), Positives = 241/373 (64%), Gaps = 17/373 (4%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
V VKRE +A CMTCP+C LLRDATT+SECLHTFCRKCIY+K++DEE+E CPVC IDLGC
Sbjct: 97 VMVKRELLARCMTCPLCGRLLRDATTVSECLHTFCRKCIYEKLNDEEVESCPVCKIDLGC 156
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
P+EKLR DH LQDVR+KIFP KR+K+ A E V LP +RKERS+SSLVV P V+
Sbjct: 157 TPVEKLRADHNLQDVRSKIFPFKRKKISADEVAAPVLLPSKRKERSISSLVVDTPTVTP- 215
Query: 134 TTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPMQ 193
T +T RR+ A RKAAALRG D P KKE D+ E + +S P L K+ Q + M
Sbjct: 216 TGLTGRRTRAVTRKAAALRGLGPGIDDPVKKEIDNGEKHAQNSSLPTNLGKVPQTRRQM- 274
Query: 194 SSSSAQPSQPISSKEKDNDAEQCEGKSD-LWKPLNFLVEVASRTRSLKSNSLGSEAKAEP 252
SS+A+ S S+K+ + D + K+D LW+PLN LVE A+RT+S +S+S K E
Sbjct: 275 -SSNAEASNHSSNKDTEGDRKDLADKTDELWRPLNCLVEAANRTKSSRSSSQSPFVKREQ 333
Query: 253 TTITDNEAQVHKTKNKEDKCKSK-SGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSN 311
+ + V+KTK++E KSK +K + P + K R RR+ A DS
Sbjct: 334 LSDSPGSTSVNKTKSREYMQKSKIEDDKKDVP------LLKRKNQRTGRRRELHAQSDSK 387
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
+AA + E++ IWFSLVAS +Q G PLPQI S YLRIKD NIP S IQKY
Sbjct: 388 P------EAAATQNEKKFSSIWFSLVASFEQEGDPPLPQIPSHYLRIKDGNIPASSIQKY 441
Query: 372 LMMKLDLPSESEV 384
LM KL LP+E+E+
Sbjct: 442 LMQKLGLPNEAEI 454
>gi|242086134|ref|XP_002443492.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
gi|241944185|gb|EES17330.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
Length = 489
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 200/431 (46%), Positives = 272/431 (63%), Gaps = 19/431 (4%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A ++ V VKR+ + C+TCP+C+ LLR ATTISECLHTFCRKCIY K++DE+++ CPVC
Sbjct: 69 AGDSAVAMVKRDLLLRCLTCPLCDRLLRKATTISECLHTFCRKCIYKKLNDEDLDHCPVC 128
Query: 68 NIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSA 127
NIDLGC P++KLR DH +QDVR+K+FP KR+KV A EA +TLPV+ KERS+SSLVV+
Sbjct: 129 NIDLGCTPVDKLRADHNIQDVRSKVFPFKRKKVNAEEAESPITLPVKVKERSISSLVVNT 188
Query: 128 PRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQ 187
PRV A TRRR+ A RKAAALRG P KK+ D+ D +S ++L+K+ Q
Sbjct: 189 PRV-APAASTRRRTRAVTRKAAALRGLGPIIVDPLKKDNDNSNKQTDNSSLLDSLSKIPQ 247
Query: 188 NVKPMQSS--SSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLG 245
+ + S+ +S P S K+K D + + KS+LWKPLN LV+ AS+T++L S
Sbjct: 248 TRRQLLSNGDTSGHP----SVKDKAGDNKDLD-KSELWKPLNRLVDAASKTKALTSAQSP 302
Query: 246 SEAKAEPTTITDNEAQVHKTKNKEDKCKSKS-GNKNNNPDPTTSETINPKRLRRIRRKTA 304
+ +P +E +T+ +E KSK+ +K+++P+P L R R + A
Sbjct: 303 ALKGDKPRESPSSE-HSSRTEARESLQKSKAEDDKSDDPEPIV--------LLRKRGRPA 353
Query: 305 AAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIP 364
DS A A + + PIWFSL+AS DQ+G PLPQI + YLRIKD +IP
Sbjct: 354 RKRKDSLPETNAASAATAIQARKALSPIWFSLIASFDQKGDPPLPQIPAHYLRIKDGSIP 413
Query: 365 VSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSA 424
S IQ+Y+M KL L SESEVEI+C GQ V + NLV+ WL+ + +IGSS
Sbjct: 414 ASSIQRYIMQKLSLLSESEVEIRCCGQTVNLGQPVRNLVERWLRVGPARP-LHTVIGSSG 472
Query: 425 KDFVMVLTYAR 435
D+VMV++Y R
Sbjct: 473 GDYVMVISYGR 483
>gi|7523703|gb|AAF63142.1|AC011001_12 Hypothetical protein [Arabidopsis thaliana]
Length = 345
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/370 (52%), Positives = 241/370 (65%), Gaps = 33/370 (8%)
Query: 71 LGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRV 130
+G + RPDH LQD+RAKIF LKRRKVKAP V +LP +RKERS+SSLVVS P V
Sbjct: 1 MGATCVHGFRPDHNLQDLRAKIFALKRRKVKAPGIV---SLPGKRKERSISSLVVSTPMV 57
Query: 131 SAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVK 190
SAQ TRRR+ A RK LR +L+ ++ KKEE S ++ + SSP+TLNK +QN +
Sbjct: 58 SAQAGTTRRRTKAPTRKE--LRNGSLA-ERTVKKEESSGDELLESTSSPDTLNKFTQNKR 114
Query: 191 PMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSN-SLGSEAK 249
QS S + S IS+KE + E + K D WKPLNFLVEVA+ T+ LKS+ S GS +K
Sbjct: 115 --QSKKSCKES--ISNKENKDGDEPWDSKMD-WKPLNFLVEVANGTKPLKSSASQGSGSK 169
Query: 250 AEPTTITDNEAQ-VHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRK-TAAAF 307
+E ++ N+ Q + + + +K+NN DPTTSET+ PKR+R +RK +A
Sbjct: 170 SEHANVSRNQFQGSKTKTKNKKRKCKREDDKSNNGDPTTSETVTPKRMRTTQRKRSATTL 229
Query: 308 GDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSF 367
GDS PQ D + AK ERRNGP+WFSLVAS DQ G N VSF
Sbjct: 230 GDSRNLPQP--DESSAKQERRNGPVWFSLVASNDQDG-----------------NTTVSF 270
Query: 368 IQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDF 427
IQKYLM KLDL SE+E+EIKCMG+ VIPTL LYNLVDLWLQ +S R A++GSSAKDF
Sbjct: 271 IQKYLMRKLDLESENEIEIKCMGEAVIPTLTLYNLVDLWLQKSSNHQRFAALVGSSAKDF 330
Query: 428 VMVLTYARKV 437
MVL YARK+
Sbjct: 331 TMVLVYARKL 340
>gi|224099889|ref|XP_002311661.1| predicted protein [Populus trichocarpa]
gi|222851481|gb|EEE89028.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 193/410 (47%), Positives = 258/410 (62%), Gaps = 40/410 (9%)
Query: 55 KISDEEIECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVK------------- 101
KI+DEE++ CPVC+I LGC PLEKLR DH+LQD+RA+IFP KR+K +
Sbjct: 2 KITDEELDSCPVCDIKLGCSPLEKLRADHSLQDLRARIFPSKRKKAREPATVSSVPEDVP 61
Query: 102 --------APEAVP------SVTLPVRRKERSLSSLVVSAPRVSAQTTMTRRRSNAAARK 147
PEAVP SV L RRKERSLSSLVVS P++S ++ +T +RS + ARK
Sbjct: 62 SVPEAVMAVPEAVPVQESEHSVPLIGRRKERSLSSLVVSTPKISVKSVLTGKRSKSVARK 121
Query: 148 AAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPMQSSSSAQPSQPISSK 207
R S + ++ KK +D E SSPETL K++Q + S++ + Q +
Sbjct: 122 ----RESPIPVEEQIKKMDDYYE----SLSSPETLRKIAQTKRQNSSTAESSKQQKPNKL 173
Query: 208 EKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAEPTTITDNEAQVHKTKN 267
+ +ND + C+ K DLWKPLN LVE A++T+S KS+ + + + EAQ KT
Sbjct: 174 DVENDVKPCKEKIDLWKPLNCLVEAATKTKSNKSDLQEIIVQIKKLDAQEEEAQALKTSI 233
Query: 268 KEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYER 327
KE KSK + +N + S ++ P+RL+ +R+K NI QA +DA +K +R
Sbjct: 234 KEHGDKSKVIGEESNSTSSPSGSVKPRRLQAMRQKREGF----NIPAQAAVDA-NSKCDR 288
Query: 328 RNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIK 387
R PIW SLVAS++Q G PLPQISS YLR+KD ++PVS I+KYL+ KL L SE+EV+I
Sbjct: 289 RFSPIWLSLVASDEQEGVAPLPQISSCYLRVKDGSLPVSHIKKYLVQKLGLVSEAEVDIL 348
Query: 388 CMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYARKV 437
+GQPV TLQL+NLVD W QTAS S+R+ +GSSAKDFVMVL+Y RKV
Sbjct: 349 LLGQPVASTLQLHNLVDWWSQTASASERIQTTVGSSAKDFVMVLSYGRKV 398
>gi|326520948|dbj|BAJ92837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 194/425 (45%), Positives = 263/425 (61%), Gaps = 28/425 (6%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV VKRE +A CMTC +C+ LLR+ATTISECLHTFCRKCIY K++DEE++ CPVC IDLG
Sbjct: 73 VVMVKREQLARCMTCKLCHRLLREATTISECLHTFCRKCIYKKLNDEELDHCPVCKIDLG 132
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C P+EKLR DH QDVR+KIFPLKR K+ A E+ V+LP++RKERS+SSLVV PR++
Sbjct: 133 CAPVEKLRADHNKQDVRSKIFPLKRNKIDAKES--PVSLPIKRKERSISSLVVDTPRIT- 189
Query: 133 QTTMTRRRSNAAARK-AAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKP 191
T +T RR+ A RK AAALRG D P +++ S + D S ++L+K+ Q +
Sbjct: 190 -TGLTGRRTRAVTRKAAAALRGLGPILD-PVERDNGSANKHPDNLSLLDSLSKVPQTRR- 246
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
++SS A S S+K+K D + K+DLWKPLN LVE AS+T+S +S S K +
Sbjct: 247 -KASSIADTSSHNSNKDKAGDDKD-LDKADLWKPLNCLVEAASKTKSFRSC---SSVKGD 301
Query: 252 PTTITDNEAQVHKTKNKEDKCKSK-SGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDS 310
+ + Q + K E+ K++ +K + P + P R + AA D
Sbjct: 302 QPNGSPSSEQASREKPVENLRKTRFQDDKKDAPQSVVLKKKGPGRTKNATSVAAAIQKD- 360
Query: 311 NISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQK 370
+Y P+WFSL+AS +Q+G PLPQI + +LRIKD +I S IQ+
Sbjct: 361 -------------QYSTALNPVWFSLIASFEQKGDPPLPQIPAHFLRIKDGSIAASSIQR 407
Query: 371 YLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMV 430
Y+M KL L SESEVE+ C GQ + P ++NL+D WL+ S + +GSS D+VMV
Sbjct: 408 YIMQKLSLGSESEVELSCCGQSINPIQPVHNLMDRWLRVG-PSRHLQTSVGSSGGDYVMV 466
Query: 431 LTYAR 435
+TY R
Sbjct: 467 ITYGR 471
>gi|326508722|dbj|BAJ95883.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 194/425 (45%), Positives = 263/425 (61%), Gaps = 28/425 (6%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV VKRE +A CMTC +C+ LLR+ATTISECLHTFCRKCIY K++DEE++ CPVC IDLG
Sbjct: 73 VVMVKREQLARCMTCKLCHRLLREATTISECLHTFCRKCIYKKLNDEELDHCPVCKIDLG 132
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C P+EKLR DH QDVR+KIFPLKR K+ A E+ V+LP++RKERS+SSLVV PR++
Sbjct: 133 CAPVEKLRADHNKQDVRSKIFPLKRNKIDAKES--PVSLPIKRKERSISSLVVDTPRIT- 189
Query: 133 QTTMTRRRSNAAARK-AAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKP 191
T +T RR+ A RK AAALRG D P +++ S + D S ++L+K+ Q +
Sbjct: 190 -TGLTGRRTRAVTRKAAAALRGLGPILD-PVERDNGSANKHPDNLSLLDSLSKVPQTRR- 246
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
++SS A S S+K+K D + K+DLWKPLN LVE AS+T+S +S S K +
Sbjct: 247 -KASSIADTSSHNSNKDKAGDDKD-LDKADLWKPLNCLVEAASKTKSFRSC---SSVKGD 301
Query: 252 PTTITDNEAQVHKTKNKEDKCKSK-SGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDS 310
+ + Q + K E+ K++ +K + P + P R + AA D
Sbjct: 302 QPNGSPSSEQASREKPVENLRKTRFQDDKKDAPQSVVLKKKGPGRTKNATSVAAAIQKD- 360
Query: 311 NISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQK 370
+Y P+WFSL+AS +Q+G PLPQI + +LRIKD +I S IQ+
Sbjct: 361 -------------QYSTALNPVWFSLIASFEQKGDPPLPQIPAHFLRIKDGSIAASSIQR 407
Query: 371 YLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMV 430
Y+M KL L SESEVE+ C GQ + P ++NL+D WL+ S + +GSS D+VMV
Sbjct: 408 YIMQKLSLGSESEVELSCCGQSINPIQPVHNLMDRWLRVG-PSRHLQTSVGSSGGDYVMV 466
Query: 431 LTYAR 435
+TY R
Sbjct: 467 ITYGR 471
>gi|125545675|gb|EAY91814.1| hypothetical protein OsI_13455 [Oryza sativa Indica Group]
Length = 439
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 189/448 (42%), Positives = 262/448 (58%), Gaps = 32/448 (7%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A+ V +V RE + ACMTCP+C LLR+AT I+ECLHTFC++CI +KI DEE++ CPVC
Sbjct: 3 AARGGVRRVWREALVACMTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVC 62
Query: 68 NIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSA 127
NIDLGC P EKLRPDH +QD+R K+FPLK +KV AP+A P+VTLPV+RK+RSLSSLVV
Sbjct: 63 NIDLGCDPEEKLRPDHNVQDIRNKVFPLKVKKVGAPKA-PTVTLPVKRKQRSLSSLVVDT 121
Query: 128 PRVSAQTTMTRRRSNAAARKAAALRGS--NLSTDKPPKKEEDSVEDNEDGASSPETLNKL 185
PRV+ QT +T RR+ A R A + S N T K K E D++ S K+
Sbjct: 122 PRVAVQTGLTGRRTKTARRTAVSHVNSPDNNGTIKLANKSEG--RDHKTQKISAAQSAKM 179
Query: 186 SQNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLG 245
++ ++++ + I S +D + K DL KPLN LV+ A+RT+ +S G
Sbjct: 180 TKTGNKKKNNTDVDVT--IQSSSEDRKDDHTIDKEDLKKPLNSLVDTANRTKFFRSGPKG 237
Query: 246 SEAKAEPTTIT-------DNEAQVHKTKNKEDKCKSKSGNK-NNNPDPTTS-----ETIN 292
AK + + D E ++ T K C +K K NN P+ S +T +
Sbjct: 238 QAAKEDKIKNSIKLLAEDDTEDKLVVTGRKVMPCSNKLKVKEENNRSPSQSASSKDKTTS 297
Query: 293 PKRLRRIRRKTAAAFGDSNISPQAVLDA--AGAKYERRNGPIWFSLVASEDQRGSLPLPQ 350
LR+ G S Q + + GA ++ P+WF LV S DQ+ LPQ
Sbjct: 298 DYELRK---------GQHADSQQGQIGSTRTGALHDGITRPVWFLLVPSPDQKQDPKLPQ 348
Query: 351 ISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTA 410
+ + Y+RIKD ++ S IQ+Y+M KLDL SE EVEI C G+ + P+ L L++LWL+ +
Sbjct: 349 LPTYYVRIKDGSLQTSLIQRYIMNKLDLASEDEVEITCHGEAISPSTTLQGLLELWLK-S 407
Query: 411 STSDRVPAMIGSSAKDFVMVLTYARKVR 438
S ++V A +G+ AK+FVM L Y R R
Sbjct: 408 SPVEQVQASLGAQAKEFVMELGYRRPQR 435
>gi|357161750|ref|XP_003579192.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 479
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 187/429 (43%), Positives = 260/429 (60%), Gaps = 24/429 (5%)
Query: 9 SNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN 68
S + VVKVK+E +A +TCP+C LR+ATTI ECLHTFCRKCIY K++ EE+ CPVC
Sbjct: 71 SESGVVKVKKENLAPRITCPLCQRYLREATTICECLHTFCRKCIYKKLAVEELNHCPVCK 130
Query: 69 IDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAP 128
IDLGC P EKLR DH LQ +R+K+ P+K +K+ A P VT PV+ KERS+SSLVV P
Sbjct: 131 IDLGCAPAEKLRADHNLQALRSKLIPVKGKKINAEVESP-VTAPVKIKERSISSLVVDPP 189
Query: 129 RVSAQTTMTRRRSNAAARK-AAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQ 187
R++ T++T RR+ A RK AAALRG D P K+ D+ + D S ++L+K+ Q
Sbjct: 190 RLT--TSLTGRRTRAVTRKAAAALRGLGPILD-PVGKDNDNTNKHADNISLLDSLSKVPQ 246
Query: 188 NVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSE 247
+ +S A+ S SSK+K + + + K++LWKPLN LV+ AS+T+S +S+ S
Sbjct: 247 T---RRKASQAETSSHHSSKDKADHGKDLD-KAELWKPLNCLVDAASKTKSFRSSPQSSA 302
Query: 248 AKAEPTTITDNEAQVHKTKNKEDKCKS-KSGNKNNNPDPTTSETINPKRLRRIRRKTAAA 306
K P+ + + V + K+ E KS G+K + P + + K R R T+ A
Sbjct: 303 VKGAPSNESPSNGHVSREKSGEHLRKSIFQGDKKDT--PLSEMMLKRKGPGRGRPATSVA 360
Query: 307 FGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVS 366
+ Q V D R IWFSL+AS +Q+G L QI + YLRI D +IP S
Sbjct: 361 -----ATTQKVPDV------RALNSIWFSLIASFEQKGFPQLAQIPTHYLRINDGSIPAS 409
Query: 367 FIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKD 426
IQ+Y+M KL L SESEVE+ C GQ V P + NL++ WL+ S + ++GSS +
Sbjct: 410 SIQRYIMQKLSLQSESEVELTCCGQSVNPAQPVRNLIERWLRFG-PSRPLQTVVGSSGGE 468
Query: 427 FVMVLTYAR 435
+VMV++Y R
Sbjct: 469 YVMVISYGR 477
>gi|40539033|gb|AAR87290.1| expressed protein [Oryza sativa Japonica Group]
gi|108711005|gb|ABF98800.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|125587873|gb|EAZ28537.1| hypothetical protein OsJ_12518 [Oryza sativa Japonica Group]
Length = 439
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/437 (42%), Positives = 256/437 (58%), Gaps = 32/437 (7%)
Query: 19 ETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEK 78
E + ACMTCP+C LLR+AT I+ECLHTFC++CI +KI DEE++ CPVCNIDLGC P EK
Sbjct: 14 EALVACMTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEK 73
Query: 79 LRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQTTMTR 138
LRPDH +QD+R K+FPLK +KV AP+A P+VTLPV+RK+RSLSSLVV PRV+ QT +T
Sbjct: 74 LRPDHNVQDIRNKVFPLKVKKVGAPKA-PTVTLPVKRKQRSLSSLVVDTPRVAVQTGLTG 132
Query: 139 RRSNAAARKAAALRGS--NLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPMQSSS 196
RR+ A R A + S N T K K E D++ S K+++ ++++
Sbjct: 133 RRTKTARRTAVSHVNSPGNNGTIKLANKSEG--RDHKTQKISAAQSAKMTKTGNKKKNNT 190
Query: 197 SAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAEPTTIT 256
+ I S +D + K DL KPLN LV+ A+RT+ +S G AK + +
Sbjct: 191 DVDVT--IQSSSEDRKDDHTIDKEDLKKPLNSLVDTANRTKFFRSGPKGQAAKEDKIKNS 248
Query: 257 -------DNEAQVHKTKNKEDKCKSKSGNK-NNNPDPTTS-----ETINPKRLRRIRRKT 303
D E ++ T K C +K K NN P+ S +T + LR+
Sbjct: 249 IKLLAEDDTEDKLVVTGRKVMPCSNKLKVKEENNRSPSQSASSKDKTTSDYELRK----- 303
Query: 304 AAAFGDSNISPQAVLDA--AGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDR 361
G S Q + + GA ++ P+WF LV S DQ+ LPQ+ + Y+RIKD
Sbjct: 304 ----GQHADSQQGQIGSTRTGALHDGITRPVWFLLVPSPDQKQDPRLPQLPTYYVRIKDG 359
Query: 362 NIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIG 421
++ S IQ+Y+M KLDL SE EVEI C G+ + P+ L L++LWL+ +S ++V A +G
Sbjct: 360 SLQTSLIQRYIMNKLDLASEDEVEITCHGEAISPSTTLQGLLELWLK-SSPVEQVQASLG 418
Query: 422 SSAKDFVMVLTYARKVR 438
+ AK+FVM L Y R R
Sbjct: 419 AQAKEFVMELGYRRPQR 435
>gi|414868841|tpg|DAA47398.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 450
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 180/399 (45%), Positives = 247/399 (61%), Gaps = 33/399 (8%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A ++ V VKRE +A C+TCP+C+ LLR ATTISECLHTFCR CIY+KI+DE+++ CPVC
Sbjct: 63 AGDSSVAMVKRELLARCLTCPLCDRLLRKATTISECLHTFCRNCIYNKINDEDLDHCPVC 122
Query: 68 NIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSA 127
IDLGC P++KLR DH +QDVR+K+FP KR+KV A EA + LPV+ KERS+SSLVV+
Sbjct: 123 KIDLGCTPVDKLRADHNIQDVRSKVFPFKRKKVNAEEAESPIMLPVKVKERSISSLVVNT 182
Query: 128 PRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQ 187
PRV+ + T RR+ RKAAALRG P KK+ D+ D +S ++L+K+ Q
Sbjct: 183 PRVTPAAS-TGRRTRVVTRKAAALRGLGPIIVDPLKKDNDNSNKQTDNSSLLDSLSKIPQ 241
Query: 188 NVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSL---KSNSL 244
+ + S+ S P S K+K +D + + KS+LWKPLN LVE AS+T+ L +S +L
Sbjct: 242 TRRQLLSNGDTS-SHP-SVKDKADDNKDFD-KSELWKPLNCLVEAASKTKPLTSAQSPAL 298
Query: 245 GSEAKAEPTTITDNEAQVHKTKNK-EDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKT 303
E + P++ +TK K ED NK+++P+P + +R++
Sbjct: 299 KGEFRESPSS-----EHFSRTKVKVED-------NKSDDPEP----------IVLLRKRG 336
Query: 304 AAAFGDSNISPQ--AVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDR 361
N P+ A A + + PIWFSL+AS DQ+G+ PLPQI + YLRIKD
Sbjct: 337 RPGRKRKNPLPETNAASTATAIQARKAFSPIWFSLIASFDQKGNPPLPQIPAHYLRIKDG 396
Query: 362 NIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLY 400
+IP S IQKY+M KL L SESEV + + T+ LY
Sbjct: 397 SIPASSIQKYIMQKLSLVSESEVRFQLFFI-FLATVSLY 434
>gi|297729367|ref|NP_001177047.1| Os12g0600200 [Oryza sativa Japonica Group]
gi|77556985|gb|ABA99781.1| zinc finger family protein, putative, expressed [Oryza sativa
Japonica Group]
gi|255670457|dbj|BAH95775.1| Os12g0600200 [Oryza sativa Japonica Group]
Length = 394
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/396 (44%), Positives = 245/396 (61%), Gaps = 21/396 (5%)
Query: 43 CLH-TFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVK 101
CLH CRKCIY KI+DEE+E CPVC IDLGC PLEKLR DH +QDVR+KIFPLKR+KV
Sbjct: 13 CLHYAVCRKCIYKKINDEELEHCPVCKIDLGCAPLEKLRADHNIQDVRSKIFPLKRKKVN 72
Query: 102 APEAVPSVTLPVRRKERSLSSLVVSAPRVSAQTTMTRRRSNAAARK-AAALRGSNLSTDK 160
A E + P +RKERS+SSLVV+ P ++ + ++T RR+ A+ RK AAALR +L
Sbjct: 73 AEEVESPIAPPAKRKERSISSLVVNTPEITPK-SLTGRRTRASTRKSAAALR--DLGPII 129
Query: 161 PP-KKEEDSVEDNEDGASSPETLNKLSQNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGK 219
PP KK+ D+ N D +S ++L+K+ Q + + S++ S P S + ++ K
Sbjct: 130 PPVKKDSDNTNKNADNSSLLDSLSKVPQTRRQVLSNAETS-SHP--SSKDKGGDDKDLDK 186
Query: 220 SDLWKPLNFLVEVASRTRSLKSNSLGSEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNK 279
S+LW+PLN LVE AS+T+S +S+ S A+ T + + A +TK +E KSK ++
Sbjct: 187 SELWRPLNCLVEAASKTKSYRSS---SAARGNQPTESPSSANASRTKAREYLLKSKVQDE 243
Query: 280 NNNPDPTTSETINPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVAS 339
P + K R R+ AV + +K+E+ P+WFSL+AS
Sbjct: 244 KKE-VPVATVPFKRKGPGRGRKPAQPPA-------AAVSSHSASKHEKLLTPVWFSLIAS 295
Query: 340 EDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQL 399
DQ+G+ PLPQI + YLRIKD N+P S IQKY+M KL LPSE+EVEI C GQPV P L
Sbjct: 296 FDQKGAPPLPQIPTHYLRIKDDNMPASSIQKYIMQKLSLPSETEVEISCCGQPVNPIQPL 355
Query: 400 YNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYAR 435
NL++ WL+ + ++GSS D+VMV++Y R
Sbjct: 356 RNLIERWLRFGPART-LQTVVGSSGGDYVMVISYGR 390
>gi|414872711|tpg|DAA51268.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 458
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 259/449 (57%), Gaps = 36/449 (8%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
M + + +V+RE +AACMTCP+C LLR+AT I+ CLHTFCR+CI +KI+DEEI+CCPV
Sbjct: 1 MGAARGLARVRREALAACMTCPLCRGLLREATAITVCLHTFCRECILEKINDEEIDCCPV 60
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVS 126
CNIDLGC P EKLRPDH LQD+R K+FP+K+ V +P+A+ TLP +RK+RS+SSLVV
Sbjct: 61 CNIDLGCDPEEKLRPDHNLQDIRNKVFPIKKINVDSPKAL--TTLPAKRKQRSISSLVVD 118
Query: 127 APRVSAQTTMTRRRSNAAARKAAALRGS--NLSTDKPPKKEEDSVEDNED---------G 175
P V QT +T +R+ A R AA+L S N T K P K E+ + +
Sbjct: 119 TPSVVKQTGLTGKRTKAKRRAAASLATSPVNNGTMKLPSKSENGDQKTDKSCPSQSTKAA 178
Query: 176 ASSPETLNKLSQNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASR 235
S+ +T N+ + K + + S + + P K+++ DA Q K K N + A +
Sbjct: 179 TSANKTENQDQKKTKKISAKQSTRAATPAKKKQRNTDA-QVSSKPSSEKRKNS--KTADK 235
Query: 236 TRSLKSNSLGSEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKR 295
KS+ + ++ P NE Q+ + + + K ++ NK P + E N
Sbjct: 236 DGLRKSSKV---PRSTPKIHAVNEEQIKEKEGEPPTRKGEADNKVVIPGTSVREHSNNSN 292
Query: 296 LRR-----------IRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRG 344
L+ ++ KTA + S + L +A + P+WFSL++ +Q+
Sbjct: 293 LKEKNDGTSPEPSPLKDKTA-----TEDSYRGSLGSAKGLHGPVTTPVWFSLISLPNQKE 347
Query: 345 SLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVD 404
LPQ+ +Y+RIKD ++ +S IQ+Y+M KLDL +E+EVEI C G+P+ P+ L L++
Sbjct: 348 DPQLPQLPKTYMRIKDGSLQISSIQRYIMKKLDLANENEVEIICHGEPICPSSTLRGLME 407
Query: 405 LWLQTASTSDRVPAMIGSSAKDFVMVLTY 433
LW + T + V A +G+ A++FVMVL Y
Sbjct: 408 LWHRRQPT-EPVEASVGAPAEEFVMVLGY 435
>gi|42571369|ref|NP_973775.1| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
gi|193885159|gb|ACF28393.1| At1g06770 [Arabidopsis thaliana]
gi|332189913|gb|AEE28034.1| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
Length = 307
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 165/311 (53%), Positives = 210/311 (67%), Gaps = 13/311 (4%)
Query: 130 VSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
VSAQ TRRR+ A RK LR +L+ ++ KKEE S ++ + SSP+TLNK +QN
Sbjct: 2 VSAQAGTTRRRTKAPTRKE--LRNGSLA-ERTVKKEESSGDELLESTSSPDTLNKFTQNK 58
Query: 190 KPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSN-SLGSEA 248
+ QS S + S IS+KE + E + K D WKPLNFLVEVA+ T+ LKS+ S GS +
Sbjct: 59 R--QSKKSCKES--ISNKENKDGDEPWDSKMD-WKPLNFLVEVANGTKPLKSSASQGSGS 113
Query: 249 KAEPTTITDNEAQ-VHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRK-TAAA 306
K+E ++ N+ Q + + + +K+NN DPTTSET+ PKR+R +RK +A
Sbjct: 114 KSEHANVSRNQFQGSKTKTKNKKRKCKREDDKSNNGDPTTSETVTPKRMRTTQRKRSATT 173
Query: 307 FGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVS 366
GDS PQ D + AK ERRNGP+WFSLVAS DQ G LPQI +++LRI+D N VS
Sbjct: 174 LGDSRNLPQP--DESSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVS 231
Query: 367 FIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKD 426
FIQKYLM KLDL SE+E+EIKCMG+ VIPTL LYNLVDLWLQ +S R A++GSSAKD
Sbjct: 232 FIQKYLMRKLDLESENEIEIKCMGEAVIPTLTLYNLVDLWLQKSSNHQRFAALVGSSAKD 291
Query: 427 FVMVLTYARKV 437
F MVL YARK+
Sbjct: 292 FTMVLVYARKL 302
>gi|218193911|gb|EEC76338.1| hypothetical protein OsI_13908 [Oryza sativa Indica Group]
Length = 385
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 227/425 (53%), Gaps = 80/425 (18%)
Query: 17 KRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPL 76
+R ++AAC+TCP+C LLRDA TISECLHTFCRKCI+++ D+E CCP CNIDLGC PL
Sbjct: 24 RRASVAACLTCPLCGRLLRDAATISECLHTFCRKCIHEEFVDKESCCCPTCNIDLGCAPL 83
Query: 77 EKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQTTM 136
EKLR DH++Q VR++IFP KRRKV+ PE + V PV+RKERSLSSL + AP+VS Q +
Sbjct: 84 EKLRVDHSMQFVRSRIFPFKRRKVENPEIICPVASPVKRKERSLSSLTIPAPQVSIQKCL 143
Query: 137 TRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPMQSSS 196
T+RR+ KA+ LR P+ S+S
Sbjct: 144 TKRRT-----KASCLRNF------------------------------------PLHSTS 162
Query: 197 SAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAEPTTIT 256
KD K W+PL +++ +SLKS ++
Sbjct: 163 RG---------SKDTSK-----KLGGWRPLGCQLKLGKDKKSLKS------------SVK 196
Query: 257 DNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINP-KRLRRIRRKTAAAFGDSNISPQ 315
D ++ KSKSG+ ++ + ++ P R R+ ++T + + +
Sbjct: 197 DT-----------NRTKSKSGDTDDGAPASKAKAREPFTRYGRVAKRTGSKKLLMLKNKK 245
Query: 316 AVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMK 375
A +RR +WF L+A+ DQRG LPQ+ + YLRIKD ++P S IQKYL K
Sbjct: 246 KRFKAKQPSKKRRFRALWFYLLAAFDQRGVPTLPQLPAKYLRIKDVDLPASIIQKYLAQK 305
Query: 376 LDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYAR 435
L+L SE+EVE+ C G+ V + L++L D WL+ S R+ + +GS A F++ L Y R
Sbjct: 306 LNLSSETEVEVLCGGKVVNQGMTLHDLADCWLEKGPKS-RMRSSVGSPATGFMVTLFYRR 364
Query: 436 KVRDI 440
D+
Sbjct: 365 PDVDV 369
>gi|115455935|ref|NP_001051568.1| Os03g0798200 [Oryza sativa Japonica Group]
gi|108711566|gb|ABF99361.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113550039|dbj|BAF13482.1| Os03g0798200 [Oryza sativa Japonica Group]
gi|222625969|gb|EEE60101.1| hypothetical protein OsJ_12964 [Oryza sativa Japonica Group]
Length = 385
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 226/425 (53%), Gaps = 80/425 (18%)
Query: 17 KRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPL 76
+R ++AAC+TCP+C LLRDATTISECLHTFCRKCI+++ D+E CCP CNIDLGC PL
Sbjct: 24 RRASVAACLTCPLCGRLLRDATTISECLHTFCRKCIHEEFVDKESCCCPTCNIDLGCAPL 83
Query: 77 EKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQTTM 136
EKLR DH++Q VR++IFP KRRKV+ PE + V PV+RKERSLSSL + AP+VS Q +
Sbjct: 84 EKLRVDHSMQFVRSRIFPFKRRKVENPEIICPVASPVKRKERSLSSLTIPAPQVSIQKCL 143
Query: 137 TRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPMQSSS 196
T+RR+ KA+ LR P+ S+S
Sbjct: 144 TKRRT-----KASCLRNF------------------------------------PLHSTS 162
Query: 197 SAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAEPTTIT 256
KD K W+PL +++ +SLKS ++
Sbjct: 163 RG---------SKDTSK-----KLGGWRPLGCQLKLGKDKKSLKS------------SVK 196
Query: 257 DNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINP-KRLRRIRRKTAAAFGDSNISPQ 315
D ++ KSKSG+ ++ + ++ P R R ++T + +
Sbjct: 197 DT-----------NRTKSKSGDTDDGAPASKAKAREPFTRYGRAAKRTGRKKLLMLKNKK 245
Query: 316 AVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMK 375
A +RR +WF L+A+ DQRG LPQ+ + YLRIKD ++P S IQKYL K
Sbjct: 246 KRFKAKQPSKKRRFRALWFYLLAAFDQRGVPTLPQLPAKYLRIKDVDLPASIIQKYLAQK 305
Query: 376 LDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYAR 435
L+L SE+EVE+ C G+ V + L++L D WL+ S R+ + +GS A F++ L Y R
Sbjct: 306 LNLSSETEVEVLCGGKVVNQGMTLHDLADCWLEKGPKS-RMRSSVGSPATGFMVTLFYRR 364
Query: 436 KVRDI 440
D+
Sbjct: 365 PDVDV 369
>gi|357115329|ref|XP_003559442.1| PREDICTED: E3 ubiquitin protein ligase DRIP1-like [Brachypodium
distachyon]
Length = 449
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 242/463 (52%), Gaps = 48/463 (10%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
M S + V++ +A +TCP+C LLRDA +EC+HTFCR+CI KI DEEIE CPV
Sbjct: 1 MGSRRGEICVRKGLLAGPLTCPLCRGLLRDAHAFTECVHTFCRECIMKKIDDEEIESCPV 60
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVS 126
CNI LG P EKLRPD+ +Q +R ++FPLKR + A P+VT P++ K+RSLSSLVV
Sbjct: 61 CNIYLGIAPEEKLRPDNNIQALRKRLFPLKRAEFDASN-FPTVTSPLKGKQRSLSSLVVE 119
Query: 127 APRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLS 186
P+V+AQ +T +R+ A A S+LS + K D+E G S K++
Sbjct: 120 TPKVAAQPVLTGKRTKATRTTFRAT--SSLSNNGTVKLLITEGHDHETGKISASKSTKMT 177
Query: 187 QN-VKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLG 245
+ +K S SQP K++ E +L KPL+ +E AS T+SL+SN
Sbjct: 178 TSAIKKQIKSDIVASSQPCPQDRKNSKTMDME---ELCKPLSSFLE-ASGTKSLRSNLKS 233
Query: 246 SEAKAEPTTITDNEAQV----------------------HKTKNKEDKCKSKSGNKNNNP 283
A A+ I +V H KEDK KS + N
Sbjct: 234 HAAAAKEDKIKSTNGKVTITETRVREASREKSLKLGPKSHAAATKEDKIKSTKSEQVANT 293
Query: 284 DPTTSETINPKRLRRIRRKTAAAFGDSN---ISPQA----VLDAAGAKYERRNG---PIW 333
+ N LR+ + GDS+ SP+ VL + + +G P+W
Sbjct: 294 GTSVGSHSNKLTLRKEKN------GDSDNLWKSPEGDYGQVLLGSTSTVYLHDGITTPVW 347
Query: 334 FSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPV 393
FSLV S Q L LPQI ++YLRIKD + V +Q+Y+M KL+L S+ EVEI C G P+
Sbjct: 348 FSLVTSPHQSEKL-LPQIPNAYLRIKDGTLQVFSVQRYIMQKLELASDDEVEILCHGMPI 406
Query: 394 IPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYARK 436
P + L +L++LWL + V +G+ AK FVMVL Y R+
Sbjct: 407 CPLMMLKDLLELWL-SRQPQHEVQVPVGAPAKQFVMVLGYRRR 448
>gi|226532512|ref|NP_001151476.1| LOC100285109 [Zea mays]
gi|195647044|gb|ACG42990.1| protein binding protein [Zea mays]
Length = 464
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 253/447 (56%), Gaps = 52/447 (11%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLR 80
+AACMTCP+C LLR+AT I+ CLHTFCR CI +KI+D++ +CCPVCNIDLGC P EKLR
Sbjct: 15 LAACMTCPLCRGLLREATAIALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLR 74
Query: 81 PDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPR-VSAQTTMTRR 139
PDH LQD+R K+FP+K+ +P+++ TLP +RK+RSLSSLVV PR V +T +T +
Sbjct: 75 PDHNLQDIRNKVFPIKKINADSPKSL--TTLPAKRKQRSLSSLVVDTPRSVVKRTGLTGK 132
Query: 140 RSNAAARKAAALRGS--NLSTDKPPKKEEDSVEDNEDGASSPET-----LNKL-SQNVKP 191
R+ A + A+ S N T + P K E+ + + +S T NK +Q++K
Sbjct: 133 RTKAKRKTVASSAASPINNGTMQLPTKFENRDQKTDKSCASQSTNVASAANKTENQDLKK 192
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
+ +S+ Q ++ +S + K N V+V+S+ S N+ + K E
Sbjct: 193 TRKTSAKQSTRAATSANR--------------KQQNTDVDVSSKPSSENRNNGTTADKDE 238
Query: 252 -----------PTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRR-- 298
P NE Q+ K +++ K+++ NK P T E N L+
Sbjct: 239 LRKYSKIPRSTPKIHAVNEEQIKKKEDELPTRKAEADNKVVIPGTTVREHSNNSNLKEKD 298
Query: 299 ---------IRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLP 349
++ KT A + S Q +L +A + P+WF L++ +Q+ LP
Sbjct: 299 NGSSPESSPLKDKTTA----DDDSYQCLLGSASDVRDPITTPVWFLLISLPNQKEDPQLP 354
Query: 350 QISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQT 409
Q+S SY+RIKDR++ +S +Q+Y+M KLDL +E+EVEI C +P+ P+ L+ L++LW
Sbjct: 355 QLSKSYMRIKDRSLQISSVQRYIMKKLDLANENEVEIICHCEPICPSSTLHGLMELW-HR 413
Query: 410 ASTSDRVPAMIGSSAKDFVMVLTYARK 436
++ V A++G+ AK+FVM L + R+
Sbjct: 414 RQPAEPVEALVGAPAKEFVMELGFRRR 440
>gi|356533743|ref|XP_003535419.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 436
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 245/447 (54%), Gaps = 51/447 (11%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
K+ E ++AC+TCP+CN R+ATTISEC H+FCR+C+ K+ DE+++ CP+CN DLG
Sbjct: 19 AAKLNYEKVSACVTCPLCNKFFRNATTISECCHSFCRECVDKKLIDEKLKHCPICNRDLG 78
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C P +KLRPD LQD+R KIFPL+ + SV L + RK+ S SL+ + ++
Sbjct: 79 CSPHDKLRPDPCLQDLRDKIFPLEEQNA-------SVKLNINRKKNS-PSLLKNNTKIDK 130
Query: 133 QTTMTRRRSNAAARKAAALR-------GSNLSTDK-----------PPKKEEDSV--EDN 172
+ + + + AL GS PP + D V E+
Sbjct: 131 AASKPDKAEDEKRGEVEALEEVSSYTIGSARRAKAAARLKFTRSAPPPSCQLDKVGGEEK 190
Query: 173 EDGASSPETLNKLSQNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEV 232
+DG P + S +K + +SS A SQ + ++DN + E +D+++PLN LVE
Sbjct: 191 KDGGLPPGETSNGSLKIK-IPNSSKANSSQQPETNKRDNSELRNE-MADMFEPLNSLVEP 248
Query: 233 ASRTRSLKSNSLGSEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETIN 292
S+ KS + T+T V N D+ N P+ S+++
Sbjct: 249 GSKKPRKKST-------MQENTVT---PIVRSHDNAADQ---------NESTPSNSDSVQ 289
Query: 293 PKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQIS 352
+R R + KT D N Q + + K + GPIWF LVA+E+++ S LPQ+S
Sbjct: 290 HQRPLRTQEKTFRISEDLNFPAQPEI-GSNIKSNKEFGPIWFCLVAAEEKKASARLPQLS 348
Query: 353 SSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTAST 412
SSYLR+KD ++ VS+I+KYL+ KL L SE+EVEI G+ ++ +LQL NLVD+WLQT
Sbjct: 349 SSYLRVKDGSVTVSYIKKYLVKKLGLGSEAEVEITLQGRALLSSLQLRNLVDMWLQTV-P 407
Query: 413 SDRVPAMIGSSAKDFVMVLTYARKVRD 439
+ + A +GSSAKDF+MVL+Y RK D
Sbjct: 408 KNGIQASVGSSAKDFIMVLSYGRKACD 434
>gi|413933115|gb|AFW67666.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 457
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 253/447 (56%), Gaps = 52/447 (11%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLR 80
+AACMTCP+C LLR+AT ++ CLHTFCR CI +KI+D++ +CCPVCNIDLGC P EKLR
Sbjct: 15 LAACMTCPLCRGLLREATAVALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLR 74
Query: 81 PDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPR-VSAQTTMTRR 139
PDH LQD+R K+FP+K+ +P+++ TLP +RK+RSLSSLVV PR V +T +T +
Sbjct: 75 PDHNLQDIRNKVFPIKKINADSPKSL--TTLPAKRKQRSLSSLVVDTPRSVVKRTGLTGK 132
Query: 140 RSNAAARKAAALRGS--NLSTDKPPKKEEDSVEDNEDGASSPET-----LNKL-SQNVKP 191
R+ A + A+ S N T + P K E+ + + +S T NK +Q++K
Sbjct: 133 RTKAKRKTVASSAASPINNGTMQLPTKFENRDQKTDKSCASQSTNVASAANKTENQDLKK 192
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
+ +S+ Q ++ +S + K N V+V+S+ S + + K E
Sbjct: 193 TRKTSAKQSTRAATSANR--------------KQQNTDVDVSSKPSSENRKNGTTADKDE 238
Query: 252 -----------PTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRR-- 298
P NE Q+ K +++ K+++ NK P T E N L+
Sbjct: 239 LRKYSKIPRSTPKIHAVNEEQIKKKEDELPTRKAEADNKVVIPGTTVREHSNNSNLKEKD 298
Query: 299 ---------IRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLP 349
++ KT A + S Q +L +A + P+WF L++ +Q+ LP
Sbjct: 299 NGSSPESSPLKDKTTA----DDDSYQCLLGSASDVRDPITTPVWFLLISLPNQKEDPQLP 354
Query: 350 QISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQT 409
Q+S SY+RIKDR++ +S +Q+Y+M KLDL +E+EVEI C G+P+ P+ L+ L++LW
Sbjct: 355 QLSKSYMRIKDRSLQISSVQRYIMKKLDLANENEVEIICHGEPICPSSTLHGLMELW-HR 413
Query: 410 ASTSDRVPAMIGSSAKDFVMVLTYARK 436
++ V A++G+ AK+FV+ L + R+
Sbjct: 414 RQPAEPVEALVGAPAKEFVIELGFRRR 440
>gi|357111109|ref|XP_003557357.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 390
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/424 (37%), Positives = 217/424 (51%), Gaps = 80/424 (18%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV+VKR + AC+TCP+C LLRDA TI+ECLHTFCRKCI ++ ++E+ CP CNIDLG
Sbjct: 35 VVRVKRSALVACLTCPLCRRLLRDAATITECLHTFCRKCISEEFINKEVCRCPTCNIDLG 94
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C P EKLR DH+L VR+KIFP KRRKVK E + +T PV+RKERSLSSL PRVS
Sbjct: 95 CAPEEKLRVDHSLLYVRSKIFPYKRRKVKDQEVISPITSPVKRKERSLSSLTGHGPRVSI 154
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
Q +T+RR+ A+ + +LR + +
Sbjct: 155 QKCLTKRRTKASCLRRFSLRST-------------------------------------L 177
Query: 193 QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAEP 252
Q SS DA + K W+PL + V +SLKS+S
Sbjct: 178 QGSS--------------KDATK---KVGGWRPLGCQLRVGKDRKSLKSDS--------- 211
Query: 253 TTITDNEAQVHKTKNKEDKCKSKSGNKNNN-PDPTTSETINPKRLRRIRRKTAAAFGDSN 311
++ ++KSG+ ++ P + KR + +KT + +
Sbjct: 212 --------------EDVNRSRTKSGDPDDGAPSNQAKAREHLKRYGNLAKKTGSRKVFTL 257
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
+ A RR +WF LVA+ DQ+G PLPQ+ + +LRIKD +P S+I KY
Sbjct: 258 KGKKKRFKANHPDKMRRLRALWFHLVAAFDQKGQ-PLPQLPTKFLRIKDVELPASYIHKY 316
Query: 372 LMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVL 431
L KL+L SE+EVE+ C G+ V P + L++L D WL RV + + S A FV L
Sbjct: 317 LAHKLNLSSEAEVEMVCGGKKVDPGMTLHDLADCWLDKGPKG-RVRSSLDSPATGFVTTL 375
Query: 432 TYAR 435
Y+R
Sbjct: 376 FYSR 379
>gi|326523247|dbj|BAJ88664.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 217/424 (51%), Gaps = 76/424 (17%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV VKR + +TCP+C LLRDA TI+ECLHTFCRKCI + D+EI CP CNIDLG
Sbjct: 30 VVMVKRAALVERLTCPLCRRLLRDAATITECLHTFCRKCISKEFIDKEICYCPTCNIDLG 89
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C P EKLR DH+LQ VR+KIFP KRRKV EA+ P +RKERSLSSL V PRVS
Sbjct: 90 CAPEEKLRVDHSLQYVRSKIFPSKRRKVVDQEAISPFASPAKRKERSLSSLTVHGPRVSI 149
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLN-KLSQNVKP 191
Q +T+RR+ KA+ LR +L + KK G P + ++ +N K
Sbjct: 150 QKCLTKRRT-----KASCLRSLSLGSKDATKKV---------GGWKPLASHIRVGKNKKS 195
Query: 192 MQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLGSEAKAE 251
++S S I S + ++ A E K+ L LN R L+S
Sbjct: 196 LKSGSEEDNRTGIKSGDPEHGAPSNEAKASL---LN---------RFLESKEY------- 236
Query: 252 PTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSN 311
+T E V KT +K+ + P++ RR+
Sbjct: 237 ---LTRKENLVKKTGSKK--------VFTLKGKKKIFKAKQPRKKRRL------------ 273
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
QA+ A ++++ P PLPQ+ + +LRIKD +P SFIQKY
Sbjct: 274 ---QALWFYLVAAFDQKGQP---------------PLPQLPTKFLRIKDVELPASFIQKY 315
Query: 372 LMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVL 431
L+ KL+L SE+EVE+ C+G+ V P + L+++++ +L + V + +GS A F+ +
Sbjct: 316 LVQKLNLSSEAEVELMCVGKKVDPAITLHDIMECYLDKGP-NGWVRSSVGSPATGFITTV 374
Query: 432 TYAR 435
Y+R
Sbjct: 375 FYSR 378
>gi|302822410|ref|XP_002992863.1| hypothetical protein SELMODRAFT_448935 [Selaginella moellendorffii]
gi|300139311|gb|EFJ06054.1| hypothetical protein SELMODRAFT_448935 [Selaginella moellendorffii]
Length = 554
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 220/434 (50%), Gaps = 64/434 (14%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ +V + I AC+TCP+C L R+ATTISECLHTFC+ CI+D+ SDEE CP+CN+DLG
Sbjct: 12 MARVSKAPIVACLTCPLCGNLFREATTISECLHTFCKDCIHDRFSDEETNSCPMCNVDLG 71
Query: 73 CVPLEKLRPDHTLQDVRAKIFPL--KRRKVKAPEAVPSVTLPVRRKERSLSSL-VVSAPR 129
VPLEKLR D L DV+AKIF L K+R A P P RRKERSLSSL V S P
Sbjct: 72 TVPLEKLRADPQLDDVQAKIFNLNPKKRPAAHIAASPPSHTPARRKERSLSSLGVTSVPS 131
Query: 130 VSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
S + + + A + D + + E ED ETL+ S
Sbjct: 132 SSRRRSRRK------AWVTESSESYEEEEDDDDNSSDAADESPEDTMYCSETLD--SDTK 183
Query: 190 KPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNSLG-SEA 248
PM+S S R R+ + NS+G +EA
Sbjct: 184 SPMRSGSK-------------------------------------RQRATRGNSVGNTEA 206
Query: 249 KAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFG 308
K + A + + + ++K ++ SG S K +RR + AAA G
Sbjct: 207 KQSGGSFLSPLACLAELAHADEKGRASSGLMKEARGREASSLRATKNVRRSSQAKAAANG 266
Query: 309 DSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFI 368
Q + + + NG +WF+L + +G LPQI S YLRIKD +PVSF+
Sbjct: 267 GGGFKCQTLPSPS----TQSNG-LWFTLTTT--NQGEEGLPQIKSPYLRIKDGKVPVSFV 319
Query: 369 QKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWL---QTASTS-DRVPAMIGSSA 424
+KYL+ KLDL SESEVEI C GQPV+ +L L ++ +WL Q +STS DR A+
Sbjct: 320 KKYLVRKLDLKSESEVEITCKGQPVVSSLPLESVRKIWLTKDQLSSTSEDRASAL----G 375
Query: 425 KDFVMVLTYARKVR 438
KDF+MVL+Y R R
Sbjct: 376 KDFLMVLSYGRNRR 389
>gi|242037795|ref|XP_002466292.1| hypothetical protein SORBIDRAFT_01g005090 [Sorghum bicolor]
gi|241920146|gb|EER93290.1| hypothetical protein SORBIDRAFT_01g005090 [Sorghum bicolor]
Length = 383
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 215/422 (50%), Gaps = 88/422 (20%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV ++R ++AAC+TCP+C L RDA TI+ECLHTFCRKCI ++ ++E+ CCP+C+I LG
Sbjct: 31 VVMLRRSSLAACLTCPLCGRLFRDAATITECLHTFCRKCISEEFINKEVCCCPICSIHLG 90
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C PLEKLR DH+LQ VR+K+FP K++KV+ P VT P +++P
Sbjct: 91 CAPLEKLRIDHSLQYVRSKVFPFKKQKVED----PEVTSP------------ITSP---- 130
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
T+ RS S+L+ P + + AS L KL P+
Sbjct: 131 --IKTKERSL-----------SSLTKHAPQMSMQKCLTKRRTKASC---LRKL-----PL 169
Query: 193 QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRSLKSNS----LGSEA 248
S+ + KS W+PL A +SL+S S +
Sbjct: 170 HSTLRG--------------SSNITKKSGGWRPLGCHFRAAKNKKSLRSKSEDVKTAEKK 215
Query: 249 KAEPTTIT-DNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAF 307
+P IT ++A+ K + + ++G K +L ++ K
Sbjct: 216 TGDPGDITLASQAKTKKQFTRRGNLEKRTGTK---------------KLLILKEK----- 255
Query: 308 GDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSF 367
N P+ + + +RR +WF L+A+ DQ+G PLPQI S +LRIKD N+P SF
Sbjct: 256 -QKNTKPKDIPN------KRRLQALWFYLLAAFDQKGQPPLPQIPSKFLRIKDVNLPASF 308
Query: 368 IQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDF 427
IQKYL+ KL+L SE+EVEI C G+PV P + L++L D W+ RV + +G+ A +F
Sbjct: 309 IQKYLVQKLNLSSEAEVEILCGGKPVSPGITLHDLADYWID-KRPKGRVRSSVGTPAAEF 367
Query: 428 VM 429
V+
Sbjct: 368 VL 369
>gi|388506244|gb|AFK41188.1| unknown [Lotus japonicus]
Length = 235
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 147/235 (62%), Gaps = 25/235 (10%)
Query: 217 EGKSDLWKPLNFLVEVASRTRSLKSNSLGS---------------EAKAEPTTITDNEAQ 261
E K DLW PL+ L+EVA+RT KSNS G+ + K+E TT ++ A
Sbjct: 5 EEKVDLWTPLHCLLEVANRTNFSKSNSQGTPHAKLEGNLATPQGGQKKSETTTKSETLAS 64
Query: 262 VHKTKNKEDKCKSKSGN-KNNNPDPTTSETINPKRLRRIRRKTAAAFGDSNISPQAVLDA 320
V K K++ K+K G+ K+ P+ P++ RR+R + S I +LDA
Sbjct: 65 VQSAKTKDNGHKAKLGDDKDGKTFPS-----GPRKRRRVRPDSQKKKAASKI----MLDA 115
Query: 321 AGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPS 380
++ N IWFSLVASEDQ+G PLPQIS+ YLRIKD N+PVSFI KYL KL+L S
Sbjct: 116 TESRCNGENSAIWFSLVASEDQKGEFPLPQISACYLRIKDGNVPVSFIHKYLAKKLNLAS 175
Query: 381 ESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYAR 435
E+EV I C GQ ++P+L+ +N+VDLWL T +S ++ A +GSSAK+FVMVL+Y+R
Sbjct: 176 EAEVVITCRGQSLLPSLKPHNIVDLWLCTTPSSKKIRASVGSSAKEFVMVLSYSR 230
>gi|242033011|ref|XP_002463900.1| hypothetical protein SORBIDRAFT_01g008520 [Sorghum bicolor]
gi|241917754|gb|EER90898.1| hypothetical protein SORBIDRAFT_01g008520 [Sorghum bicolor]
Length = 336
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 126/178 (70%), Gaps = 6/178 (3%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
M + + +V+RE +AACMTCP+C LLR AT I+ CLHTFCR+CI +KI+DEE++CCPV
Sbjct: 1 MGTARGLARVRREALAACMTCPLCRGLLRAATAITLCLHTFCRECIMEKINDEEVDCCPV 60
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVS 126
C+IDLGC P EKLRPDH LQD+R K+FP+K+ V AP+AV LP +RK+RSLSSLVV
Sbjct: 61 CDIDLGCDPEEKLRPDHNLQDIRNKVFPIKKINVDAPKAV--TILPAKRKQRSLSSLVVD 118
Query: 127 APRVSAQTTMTRRRSNAAARKAAALRGS---NLSTDKPPKKEEDSVEDNEDGASSPET 181
P V +T++T +R+ A R+AA+ R + N T K P K E+ + E ++S T
Sbjct: 119 TPSVVKRTSLTGKRTK-AKRRAASSRATSPVNNGTMKLPIKSENRDQKTEKSSASQST 175
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 375 KLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYA 434
K+ +P S VEI C G+P+ P+ L+ L++LW + T + V A++G+ A +FVMVL Y
Sbjct: 260 KVVIPGTS-VEIICHGEPICPSSTLHGLMELWHRRQPT-EPVEALVGTPANEFVMVLGYR 317
Query: 435 RK 436
R+
Sbjct: 318 RR 319
>gi|302760615|ref|XP_002963730.1| hypothetical protein SELMODRAFT_438486 [Selaginella moellendorffii]
gi|300168998|gb|EFJ35601.1| hypothetical protein SELMODRAFT_438486 [Selaginella moellendorffii]
Length = 378
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 218/435 (50%), Gaps = 84/435 (19%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VVKV R + AC+TCP+C++LL +ATTI ECLH+FCR+CI+ K+S+++ + CP+C++ LG
Sbjct: 3 VVKVARAPLVACLTCPLCSSLLDEATTICECLHSFCRECIHLKLSEDDTQSCPICDVYLG 62
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAP-EAVPSVTLP-VRRKERSLSSL-VVSAPR 129
PLEKLRPD L ++R K+F +V+ P +A P LP ++RKERSLSSL V SAP
Sbjct: 63 VAPLEKLRPDPQLDELRNKLFSPGAPRVRVPGDASP---LPRLKRKERSLSSLGVFSAPS 119
Query: 130 VSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
S + +R + R + S S ED E + S ++ N +
Sbjct: 120 SSRRRKPSRPQQQHYTRVKREITSS-------------SEEDEEHKSESSDSGNHAKKPT 166
Query: 190 KPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVA--------SRTRSLKS 241
+ + S A + PL +L E+A SR ++ S
Sbjct: 167 REDKGKSVA---------------------AGYHSPLAYLAELADSDHAGGSSRQQNQPS 205
Query: 242 NSLGSEAKAEPTTITDNEAQVHK-TKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIR 300
+S+G + K + TT + K ++ + + + G NN T+ P R +
Sbjct: 206 SSVGRDIKRQATT-----GRFSKLSRPTKGVPRRRGGTSANNGGELYKATLPP----RFQ 256
Query: 301 RKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKD 360
TA NG +WF+L + +Q LP I++ Y+RI D
Sbjct: 257 VVTA-----------------------DNG-VWFALKPAANQSDDSVLPAITTPYVRITD 292
Query: 361 RNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMI 420
+PVS ++KY+ KL+L +E++VE+ C GQP++ +L + N+ +WL D+ P+ +
Sbjct: 293 GRLPVSLVKKYIATKLNLGNETDVELNCRGQPIVSSLPVENVQRIWL-AKPRDDQTPSKL 351
Query: 421 GSSAKDFVMVLTYAR 435
+S + +M LTY R
Sbjct: 352 DTSL-ELLMTLTYKR 365
>gi|302786086|ref|XP_002974814.1| hypothetical protein SELMODRAFT_414938 [Selaginella moellendorffii]
gi|300157709|gb|EFJ24334.1| hypothetical protein SELMODRAFT_414938 [Selaginella moellendorffii]
Length = 400
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 224/438 (51%), Gaps = 68/438 (15%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VVKV R + AC+TCP+C++LL +ATTI ECLH+FCR+CI+ K+S+++ + CP+C++ LG
Sbjct: 3 VVKVARAPLVACLTCPLCSSLLDEATTICECLHSFCRECIHLKLSEDDTQSCPICDVYLG 62
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAP-EAVPSVTLP-VRRKERSLSSL-VVSAPR 129
PLEKLRPD L ++R K+F +V+ P +A P LP ++RKERSLSSL V SAP
Sbjct: 63 VAPLEKLRPDPQLDELRNKLFSPGAPRVRVPGDASP---LPRLKRKERSLSSLGVFSAPS 119
Query: 130 VSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNV 189
S + +R + R + S S ED E + S ++++ +
Sbjct: 120 SSRRRKPSRPQQQHYTRVKREITSS-------------SEEDEEHKSESSDSVSCICLVT 166
Query: 190 KPMQSSSSAQPSQPISSKEKDNDAEQCEGKS---DLWKPLNFLVEVA--------SRTRS 238
+ S + + ++ + +GKS PL +L E+A SR ++
Sbjct: 167 RDKFSLCTHW--EGLTGNHAKKPTREDKGKSVAAGYHSPLAYLAELADSDHAGGSSRQQN 224
Query: 239 LKSNSLGSEAKAEPTTITDNEAQVHK-TKNKEDKCKSKSGNKNNNPDPTTSETINPKRLR 297
S S+G + K + TT + K ++ + + + G NN T+ P
Sbjct: 225 QPSTSVGRDIKRQATT-----GRFSKLSRPTKGVPRRRGGTSANNGGELYKATLPP---- 275
Query: 298 RIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLR 357
R + TA NG +WF+L + +Q LP I++ Y+R
Sbjct: 276 RFQVVTA-----------------------DNG-VWFALKPAANQSDDSVLPAITTPYVR 311
Query: 358 IKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVP 417
I D +PVS ++KY+ KL+L +E++VE+ C GQP++ +L + N+ +WL D+ P
Sbjct: 312 ITDGRLPVSLVKKYIATKLNLGNETDVELNCRGQPIVSSLPVENVQRIWL-AKPRDDQTP 370
Query: 418 AMIGSSAKDFVMVLTYAR 435
+ + +S + +M LTY R
Sbjct: 371 SKLDTSL-ELLMTLTYKR 387
>gi|414873396|tpg|DAA51953.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 387
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 111/152 (73%), Gaps = 4/152 (2%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV ++R +AAC+TCP+C LLRDA TI+ECLHTFCRKCI ++ ++E+ CCPVC+IDLG
Sbjct: 30 VVMLRRSGLAACLTCPLCGRLLRDAATITECLHTFCRKCISEEFVNKEVCCCPVCSIDLG 89
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C PLEKLR DH+LQ VR+K+FP K+RKV+ PE +T P++ K RSLSSL AP++S
Sbjct: 90 CAPLEKLRIDHSLQYVRSKVFPSKKRKVEDPEVTSPITSPIKTKVRSLSSLTKHAPQMSM 149
Query: 133 QTTMTRRRSNAAARK----AAALRGSNLSTDK 160
Q + +RR+ A+ + + LRGS+ T K
Sbjct: 150 QKCLRKRRTKASCLQNLPLHSTLRGSSNITKK 181
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Query: 326 ERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVE 385
+RR +WF L+A+ DQ+G PLPQI S +LRIKD N+P SFIQKYL KL+L SE+EVE
Sbjct: 266 KRRLPALWFYLLAAFDQKGHPPLPQIPSKFLRIKDVNLPASFIQKYLAQKLNLSSETEVE 325
Query: 386 IKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYAR 435
I C G+PV P + L++L D W+ S RV + +G+ A +FV+ + YAR
Sbjct: 326 IFCGGRPVSPGITLHDLADHWIGKRS-KGRVRSSVGTPAAEFVLKVFYAR 374
>gi|226507070|ref|NP_001150954.1| protein binding protein [Zea mays]
gi|195643190|gb|ACG41063.1| protein binding protein [Zea mays]
Length = 387
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 111/152 (73%), Gaps = 4/152 (2%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV ++R +AAC+TCP+C LLRDA TI+ECLHTFCRKCI ++ ++E+ CCPVC+IDLG
Sbjct: 30 VVMLRRSGLAACLTCPLCGRLLRDAATITECLHTFCRKCISEEFVNKEVCCCPVCSIDLG 89
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C PLEKLR DH+LQ VR+K+FP K+RKV+ PE +T P++ K RSLSSL AP++S
Sbjct: 90 CAPLEKLRIDHSLQYVRSKVFPSKKRKVEDPEVTSPITSPIKTKVRSLSSLTKHAPQMSM 149
Query: 133 QTTMTRRRSNAAARK----AAALRGSNLSTDK 160
Q + +RR+ A+ + + LRGS+ T K
Sbjct: 150 QKCLRKRRTKASCLQNLPLHSTLRGSSNITKK 181
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Query: 326 ERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVE 385
+RR +WF L+A+ DQ+G PLPQI S +LRIKD N+P SFIQKYL KL+L SE+EVE
Sbjct: 266 KRRLPALWFYLLAAFDQKGHPPLPQIPSKFLRIKDVNLPASFIQKYLAQKLNLSSETEVE 325
Query: 386 IKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYAR 435
I C G+PV P + L++L D W+ S RV + + + A +FV+ + YAR
Sbjct: 326 IFCGGRPVSPGITLHDLADHWIGKRS-KGRVRSSVSTPAAEFVLKVFYAR 374
>gi|224131250|ref|XP_002328492.1| predicted protein [Populus trichocarpa]
gi|222838207|gb|EEE76572.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/113 (65%), Positives = 92/113 (81%), Gaps = 2/113 (1%)
Query: 4 EREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIEC 63
E+EM VV+VKR+ + ACMTCP+CN LL +ATTIS CLHTFCRKCIY K++ E+I+C
Sbjct: 70 EKEMVEQ--VVRVKRKKLEACMTCPLCNHLLNEATTISLCLHTFCRKCIYKKLTHEKIDC 127
Query: 64 CPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRK 116
CP+CN+ LG +P EKLRPD+ LQD+RAKIFP KRR+VKA E VPSV LP ++K
Sbjct: 128 CPICNMHLGRLPTEKLRPDNYLQDMRAKIFPFKRREVKAFEVVPSVALPKKKK 180
>gi|294461121|gb|ADE76126.1| unknown [Picea sitchensis]
Length = 215
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 115/183 (62%), Gaps = 27/183 (14%)
Query: 273 KSKSGNKNNNPD---PTTSETINPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRN 329
K +SG + P+ P T P+R+ R++ A A ++ + KYERR+
Sbjct: 37 KKESGKFHPGPNSKVPRKLHTTGPERVSVSRKQRAVA--------GSLESGSSMKYERRS 88
Query: 330 GPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCM 389
P+WF+L+ASE+Q G LPQIS YLRIKD N+PVS+++KYL+ KL+L +ESEVEI C
Sbjct: 89 NPVWFALLASENQVGDNALPQISKYYLRIKDGNVPVSYVKKYLVKKLELKNESEVEITCC 148
Query: 390 GQPVIPTLQLYNLVDLWLQTASTSDRVPAM---------------IGS-SAKDFVMVLTY 433
GQP++P+L LY+LV+ W+Q A++SDR+ +M G+ SA++F+MVL Y
Sbjct: 149 GQPIVPSLSLYSLVEFWIQYAASSDRLSSMQDVDPERAVSKFSSGAGNPSAEEFMMVLIY 208
Query: 434 ARK 436
RK
Sbjct: 209 GRK 211
>gi|326497399|dbj|BAK05789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 280
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 127/206 (61%), Gaps = 31/206 (15%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ +V R +A C+TCP+C R+A+ SEC HTFCR+CI KI +EEIE CPVC++ LG
Sbjct: 7 LARVPRALLAPCVTCPLCRGYFREASAFSECGHTFCRECIMKKIDEEEIEACPVCDVALG 66
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
P EKLR D ++Q +R +FP K +V A EA P++TLP +RKERS+SSL V P+V+
Sbjct: 67 ITPEEKLRADISIQAIRNNLFPPK-SEVDAVEA-PTITLPAKRKERSISSL-VEIPKVAT 123
Query: 133 QTTMTRRRSNAAAR------------------------KAAALRGSNLSTDKPPKKEEDS 168
Q+T+T RR+ AA R KA AL+ + ++T K+++S
Sbjct: 124 QSTLTGRRTKAARRTIISHKFSLGKLPNKSEDRNQTVEKALALKSTKMTTSA--NKKQNS 181
Query: 169 VEDNEDGASSPETLNKLSQNVKPMQS 194
V+ +EDG + ET++K + KP+QS
Sbjct: 182 VDISEDGKNH-ETIDK-EELEKPLQS 205
>gi|449433281|ref|XP_004134426.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
gi|449504181|ref|XP_004162275.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]
Length = 329
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 99/147 (67%), Gaps = 5/147 (3%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
MA+ VK+ E + C+TCP+C+ L +ATTISECLHTFCR CIY+KI++EE+E CPV
Sbjct: 1 MATATATVKLPTEKLMGCLTCPLCHNLFTNATTISECLHTFCRDCIYEKIAEEELEGCPV 60
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAV-----PSVTLPVRRKERSLS 121
CN +LG VPLEKLR DHT+ D+R KIF K RK K PE SV+LP +RKE +S
Sbjct: 61 CNTNLGGVPLEKLRADHTMDDLREKIFSCKWRKEKEPEETQLSSSSSVSLPTKRKEGPVS 120
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKA 148
L + ++ + +++ S + A+++
Sbjct: 121 ILEIDNTYTTSDSGTSKKLSASTAQES 147
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%)
Query: 327 RRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPS 380
+ + PIWF LVAS+ Q G+ PLPQISS+YLR+ D +IPVSFIQKYL KL L S
Sbjct: 260 KSSSPIWFQLVASDHQEGNEPLPQISSNYLRVSDGSIPVSFIQKYLAKKLGLAS 313
>gi|242033629|ref|XP_002464209.1| hypothetical protein SORBIDRAFT_01g014160 [Sorghum bicolor]
gi|241918063|gb|EER91207.1| hypothetical protein SORBIDRAFT_01g014160 [Sorghum bicolor]
Length = 290
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 108/172 (62%), Gaps = 7/172 (4%)
Query: 264 KTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLRRIRRKTAAAFGDSNISPQAVLDAAGA 323
K K +E+ KSK+ +++ D T + +R + RK +++ P DAA A
Sbjct: 120 KAKARENLEKSKT--EDDKKDAPTPPVLPKRRAQGTARKRKDLQAPTDVKP----DAAAA 173
Query: 324 KYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESE 383
+ ++ IWFSL+AS +Q+G PLPQI S YLRIKD N+P S IQKYLM KL LPSESE
Sbjct: 174 QSAKKFRSIWFSLIASFNQQGDPPLPQIPSHYLRIKDGNVPASSIQKYLMQKLSLPSESE 233
Query: 384 VEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYAR 435
VEIKC QPV P+ L NLV+LWL+ T M GSSAK+FVMVLTY R
Sbjct: 234 VEIKCCEQPVNPSQPLCNLVELWLKGRET-QTTQTMTGSSAKEFVMVLTYGR 284
>gi|168036151|ref|XP_001770571.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678092|gb|EDQ64554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 83/116 (71%), Gaps = 2/116 (1%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
V++ + + AC+TCP+CN L+R+ATTISECLHTFC+ CI ++S+ E ECCP+C++ LG
Sbjct: 14 VRIPKAPLLACLTCPLCNYLIREATTISECLHTFCKACITAELSNGESECCPMCHVGLGT 73
Query: 74 VPLEKLRPDHTLQDVRAKIFP--LKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSA 127
+PLEKLR DH L D++ K+FP +K+RK+ P + +RKERSL SL V
Sbjct: 74 LPLEKLRADHQLNDLKEKLFPSNVKKRKLGLAIGSPGTSNATKRKERSLYSLGVKG 129
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 26/132 (19%)
Query: 329 NGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKL--DLPSESEVEI 386
NG IWF L + + Q LP +S Y+RIKD +PVS ++KYL+ K + +E EVEI
Sbjct: 400 NG-IWFHLESGDLQANEDALPPLSYPYVRIKDGKLPVSMVKKYLVQKFAHKVKTEMEVEI 458
Query: 387 KCMGQPVIPTLQLYNLVDLWL------QTASTSDRVPAMIG-----------------SS 423
C GQPV+ +L L + D+W QT + + +P +S
Sbjct: 459 TCRGQPVVSSLPLEGIRDIWFSAQVSDQTQTQTQALPPTQSQGEPSTAPANGSGPSEPAS 518
Query: 424 AKDFVMVLTYAR 435
A DF+MVLTY R
Sbjct: 519 AADFLMVLTYKR 530
>gi|357443049|ref|XP_003591802.1| hypothetical protein MTR_1g093150 [Medicago truncatula]
gi|355480850|gb|AES62053.1| hypothetical protein MTR_1g093150 [Medicago truncatula]
Length = 426
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 167/321 (52%), Gaps = 31/321 (9%)
Query: 132 AQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDN-----EDGASSPETLNKL- 185
T ++ RR+ AARK +R T +P K D +D+ E +P+ KL
Sbjct: 119 GSTILSARRAKIAARKKF-IRTELAPTSQPDKVTVDEKKDDKRPRLETSTETPKIRFKLY 177
Query: 186 ---SQNVKPM----QSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLVEVASRTRS 238
S+++ + SS SQ I + D E +GK+ + +PLN VE ++ +S
Sbjct: 178 NAASRDLTTLCTKQNSSKPESSSQKIVFRNISRDTESRKGKAAVCEPLNLSVETTNKNKS 237
Query: 239 LKSNSLGSEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINPKRLR- 297
SNS E P + ++ H K G++ E+I PK
Sbjct: 238 -PSNSTVQENGDIPMLVDSSDNDSHHV----SKLTEAEGDQ--------IESIPPKSTSL 284
Query: 298 RIRRKTAAAFGDS-NISPQAVLDAAGAKYERRN-GPIWFSLVASEDQRGSLPLPQISSSY 355
+I+ K+ A S L A +++ PIWFSLVAS++Q LPQISS Y
Sbjct: 285 KIKLKSVANQEKRVKFSEDLNLPALAENESKKDCNPIWFSLVASKEQDVGA-LPQISSPY 343
Query: 356 LRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDR 415
+ +++ ++PVS I+K+L+ KLDL SE+EVEI G+PV+ ++QL NLV++WL+T ++R
Sbjct: 344 IMVRNGSLPVSHIKKHLVQKLDLASEAEVEILLRGKPVLCSMQLQNLVEMWLETMPKNER 403
Query: 416 VPAMIGSSAKDFVMVLTYARK 436
+ +GSSAKDFVMVL+Y RK
Sbjct: 404 IQTSVGSSAKDFVMVLSYGRK 424
>gi|168051407|ref|XP_001778146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670468|gb|EDQ57036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 573
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
V++ + + C+TCP+CN L+ +ATTISECLHTFC+ CI ++++ E ECCPVC++ LG
Sbjct: 14 VRIPKAPLLTCLTCPLCNYLIWEATTISECLHTFCKDCIAAELTNGESECCPVCHVGLGT 73
Query: 74 VPLEKLRPDHTLQDVRAKIFP--LKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSA 127
+PLEKLR DH L D++ K+FP +K+RK+ P + RRKERSL SL V
Sbjct: 74 LPLEKLRADHQLNDLKEKLFPSNVKKRKLGLVLGSPETSNATRRKERSLYSLGVKG 129
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLD--LPSESEVEIKCM 389
IWF L + + Q LP +S Y+RIKD +PVS ++KYL+ KL + +E +VEI C
Sbjct: 403 IWFHLESGDLQANEDALPPLSYPYVRIKDGKLPVSMVKKYLVQKLSHKVKTEMDVEITCR 462
Query: 390 GQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAK 425
GQPV+ +L L + D+W +A SD+ ++ + A+
Sbjct: 463 GQPVVSSLPLEGIRDIWF-SAQVSDQAQTLLSTQAQ 497
>gi|212723178|ref|NP_001131749.1| uncharacterized LOC100193116 [Zea mays]
gi|194692422|gb|ACF80295.1| unknown [Zea mays]
gi|414883780|tpg|DAA59794.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 300
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 101/184 (54%), Gaps = 18/184 (9%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
V+ +A C++C IC LLRDAT +ECLH FCRKCIYDK++ + I+CCP C I +G P
Sbjct: 49 VRGSVVAPCVSCGICGGLLRDATAFTECLHAFCRKCIYDKVAKDNIKCCPKCGIFMG-NP 107
Query: 76 LEKLRPDHTLQDVRAKIFPLKRRKV----KAPEAVPS-VTLP--VRRKERSLSSLVVSAP 128
LEKLRPDH+L+ +R IFP KRRKV K E V S TLP V ++L+ +A
Sbjct: 108 LEKLRPDHSLEHIRPLIFPAKRRKVVTMKKRKERVSSESTLPSVVGTTAEESTALIPAAS 167
Query: 129 RVSAQTTMTRRRSNAAAR-------KAAAL---RGSNLSTDKPPKKEEDSVEDNEDGASS 178
AQ +T +A +R A L G+ + PP EE + + D
Sbjct: 168 ESKAQKDLTPVGRDALSRIRGRDFDSACGLTEDTGALIVWQAPPILEETAAHNQLDSKQD 227
Query: 179 PETL 182
P++
Sbjct: 228 PDSF 231
>gi|242047616|ref|XP_002461554.1| hypothetical protein SORBIDRAFT_02g004666 [Sorghum bicolor]
gi|241924931|gb|EER98075.1| hypothetical protein SORBIDRAFT_02g004666 [Sorghum bicolor]
Length = 179
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
V+ +A ++C IC LL DAT +ECLH FCRKCIYDK++ + IECCP C I LG P
Sbjct: 55 VRASVVAPRVSCGICGGLLHDATAFTECLHAFCRKCIYDKVAKDNIECCPKCGIFLG-NP 113
Query: 76 LEKLRPDHTLQDVRAKIFPLKRRKV 100
LEKLRPDH+LQ +R+ IFP KRRKV
Sbjct: 114 LEKLRPDHSLQHIRSLIFPAKRRKV 138
>gi|297722377|ref|NP_001173552.1| Os03g0632800 [Oryza sativa Japonica Group]
gi|255674724|dbj|BAH92280.1| Os03g0632800 [Oryza sativa Japonica Group]
Length = 203
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 59/67 (88%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
V VKRE +A CMTCP+C LLRDATT+SECLHTFCRKCIY+K++DEE+E CPVC IDLGC
Sbjct: 97 VMVKRELLARCMTCPLCGRLLRDATTVSECLHTFCRKCIYEKLNDEEVESCPVCKIDLGC 156
Query: 74 VPLEKLR 80
P+EKLR
Sbjct: 157 TPVEKLR 163
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 357 RIKDRNIPVSFIQKYLMMKLDLPSESEV 384
+++D NIP S IQKYLM KL LP+E+EV
Sbjct: 161 KLRDGNIPASSIQKYLMQKLGLPNEAEV 188
>gi|297831028|ref|XP_002883396.1| hypothetical protein ARALYDRAFT_479814 [Arabidopsis lyrata subsp.
lyrata]
gi|297329236|gb|EFH59655.1| hypothetical protein ARALYDRAFT_479814 [Arabidopsis lyrata subsp.
lyrata]
Length = 482
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 310 SNISPQ-AVLDAAGAKYERRN-GPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSF 367
+N +P+ AV K E RN +WFSL+ S+ Q + LP I++ +R+KDRN+ VS+
Sbjct: 333 NNTTPEVAVTVEEEKKVEGRNTNAVWFSLMPSKTQNIEMLLPPINARCIRVKDRNMTVSY 392
Query: 368 IQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDF 427
++KYLM+KL L SE +VE+ +P+ +L L++LVD W+QT +R AM+GSSA DF
Sbjct: 393 LKKYLMVKLGLESEDQVEVWLRNEPLCSSLTLHSLVDWWVQTTPLPERRSAMVGSSAADF 452
Query: 428 VMVLTYARK 436
+M L Y+ K
Sbjct: 453 LMNLHYSFK 461
>gi|302771287|ref|XP_002969062.1| hypothetical protein SELMODRAFT_440578 [Selaginella moellendorffii]
gi|300163567|gb|EFJ30178.1| hypothetical protein SELMODRAFT_440578 [Selaginella moellendorffii]
Length = 394
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 114/209 (54%), Gaps = 16/209 (7%)
Query: 235 RTRSLKSNSLG-SEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSETINP 293
R R+ + NS+G +EAK + A + + + ++K ++ SG S
Sbjct: 192 RQRATRGNSVGNAEAKQSGGSFLSPLACLAELAHADEKGRASSGLMKEARGREASSLRAT 251
Query: 294 KRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISS 353
K +RR + AAA G Q + + + NG +WF+L + +G LPQI S
Sbjct: 252 KNVRRSSQAKAAANGGGGFKCQTLPSPS----TQSNG-LWFTLTTT--NQGEEGLPQIKS 304
Query: 354 SYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVDLWL---QTA 410
YLRIKD +PVSF++KYL+ KLDL SESEVEI C GQPV+ +L L ++ +WL Q +
Sbjct: 305 PYLRIKDGKVPVSFVKKYLVRKLDLKSESEVEITCKGQPVVSSLPLESVRKIWLTKDQLS 364
Query: 411 ST-SDRVPAMIGSSAKDFVMVLTYARKVR 438
ST DR A+ KDF+MVL+Y R R
Sbjct: 365 STPEDRASAL----GKDFLMVLSYGRNRR 389
>gi|22331268|ref|NP_188946.2| putative E3 ubiquitin protein ligase DRIPH [Arabidopsis thaliana]
gi|75311516|sp|Q9LS86.1|DRIPH_ARATH RecName: Full=Probable E3 ubiquitin protein ligase DRIPH;
AltName: Full=DREB2A-interacting protein homolog
gi|9294195|dbj|BAB02097.1| unnamed protein product [Arabidopsis thaliana]
gi|20466758|gb|AAM20696.1| RING zinc finger protein, putative [Arabidopsis thaliana]
gi|30387603|gb|AAP31967.1| At3g23060 [Arabidopsis thaliana]
gi|332643190|gb|AEE76711.1| putative E3 ubiquitin protein ligase DRIPH [Arabidopsis thaliana]
Length = 480
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
++ KV + + C+ CPIC +DATTISECLHTFCR CI +K +E + CPVCN++L
Sbjct: 1 MLTKVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNL 60
Query: 72 GCVPLEKLRPDHTLQDVRAKIF 93
G PLEKLR D T QD++ KI+
Sbjct: 61 GVFPLEKLRSDCTWQDLKLKIY 82
>gi|297805268|ref|XP_002870518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316354|gb|EFH46777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 192
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%)
Query: 327 RRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEI 386
+RN PIWF LVAS PL QISSS +R+K+ N+ +SFI+KYL+ KLDL SE+EVE+
Sbjct: 78 KRNTPIWFRLVASNQDNTIAPLQQISSSSIRVKNSNMQLSFIKKYLVKKLDLKSENEVEL 137
Query: 387 KCMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYARKVRDI 440
+P+ ++ L +L W+ T D +GSS D++M + Y RK ++
Sbjct: 138 YLENEPLDSSIMLPDLWQYWISTKKDVDVRNVKVGSSGADYIMAINYGRKSGNV 191
>gi|297722547|ref|NP_001173637.1| Os03g0741700 [Oryza sativa Japonica Group]
gi|255674884|dbj|BAH92365.1| Os03g0741700 [Oryza sativa Japonica Group]
Length = 75
Score = 101 bits (251), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 52/62 (83%)
Query: 19 ETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEK 78
E + ACMTCP+C LLR+AT I+ECLHTFC++CI +KI DEE++ CPVCNIDLGC P EK
Sbjct: 14 EALVACMTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEK 73
Query: 79 LR 80
LR
Sbjct: 74 LR 75
>gi|67593286|ref|XP_665709.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656518|gb|EAL35482.1| hypothetical protein Chro.10374, partial [Cryptosporidium hominis]
Length = 278
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 3 VEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE 62
+E ++ N L V KR+ ++ + CPIC R ATTI ECLHTFC+ CI + I + E
Sbjct: 23 LETKVTENGLDVSFKRKVVSDLLICPICEGFFRGATTIRECLHTFCKACIIEHIESKGAE 82
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
CP C ++G PL+ L D T+Q++ KIFP
Sbjct: 83 -CPKCGQNIGIYPLQGLVFDRTIQNITDKIFP 113
>gi|66362364|ref|XP_628146.1| ring domain protein [Cryptosporidium parvum Iowa II]
gi|46227384|gb|EAK88319.1| ring domain protein [Cryptosporidium parvum Iowa II]
Length = 284
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 3 VEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE 62
+E ++ N L V KR+ ++ + CPIC R ATTI ECLHTFC+ CI + I + E
Sbjct: 23 LETKVTENGLDVSFKRKVVSDLLICPICEGFFRGATTIRECLHTFCKACIIEHIESKGAE 82
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
CP C ++G PL+ L D T+Q++ KIFP
Sbjct: 83 -CPKCGQNIGIYPLQGLVFDRTIQNITDKIFP 113
>gi|449469214|ref|XP_004152316.1| PREDICTED: uncharacterized protein LOC101223230 [Cucumis sativus]
Length = 352
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 327 RRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEI 386
R + IWF+L A E+Q LPQIS +YLRIKD + VS + KYL+ KL L SESE+EI
Sbjct: 242 RPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHLDSESEIEI 301
Query: 387 KCMGQPVIPTLQLYNLVD-LWLQTASTSDRVPAMIGSSAKDFVMVLTYARK 436
+C GQ ++P + ++ D +W T+S S + SS + +M+L Y RK
Sbjct: 302 RCRGQELVPFWTMQDVRDRIWNNTSSNS-LFTLLPQSSTTNHLMLLHYGRK 351
>gi|403370330|gb|EJY85028.1| Zinc finger, C3HC4 type domain-containing protein [Oxytricha
trifallax]
Length = 193
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKI-SDEEIECCPVCNID 70
+ K+K+ + + + CP+C RDA TI+ECL TFC+ CIY D+ E CP CNI
Sbjct: 12 FIRKIKKRDLHSYLKCPLCTGFFRDAHTINECLDTFCKSCIYKYFYEDQNKENCPKCNIH 71
Query: 71 LGCVPLEKLRPDHTLQDVRAKIFPLKRRK 99
LG PLE + D T+Q + ++P ++K
Sbjct: 72 LGGRPLETIISDQTIQKIVDLLYPQFKKK 100
>gi|357163182|ref|XP_003579650.1| PREDICTED: uncharacterized protein LOC100821362 [Brachypodium
distachyon]
Length = 325
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQ 391
+WF L A+ Q LPQI SYLRIKD +P+ + KYL+ KL L ESEVEI C G+
Sbjct: 221 VWFVLQAAPHQGREPFLPQIPRSYLRIKDGRMPIRLLIKYLVNKLGLEDESEVEITCRGR 280
Query: 392 PVIPTLQLYNLVD-LWLQTASTSDRV-PAMIGSSAKDFVMVLTYARK 436
P++P + L +L D +W Q + S V P M S + +MVL Y R+
Sbjct: 281 PLLPFMTLQHLRDSIWCQRDAVSPLVAPDM---STANHIMVLQYGRR 324
>gi|334187656|ref|NP_196829.2| RING finger protein [Arabidopsis thaliana]
gi|332004488|gb|AED91871.1| RING finger protein [Arabidopsis thaliana]
Length = 387
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 307 FGDSNISPQAVLD-----AAGAKYERR--------NGPIWFSLVASEDQRGSLPLPQISS 353
FG S+ PQ + + AG R + IWF L AS++Q LPQI
Sbjct: 238 FGRSSFQPQLIGNDNPDGVAGPSSSLRVIDPPRRPHSGIWFLLQASQNQTVEPFLPQIPK 297
Query: 354 SYLRIKDRNIPVSFIQKYLMMKLDLPSES-EVEIKCMGQPVIPTLQLYNLVD-LW---LQ 408
SYLRIKD + V + KYL+ KL L ES +VEI+C GQ + P L L ++ D +W
Sbjct: 298 SYLRIKDGKMTVRLLMKYLVNKLRLEHESQQVEIRCRGQELEPVLTLQHVRDAIWRGSRD 357
Query: 409 TASTSDRVPAMIGSSAKDFVMVLTYARKV 437
T+S S + + SS D +MVL Y R +
Sbjct: 358 TSSLSQNITLLPNSSTSDHLMVLHYGRTI 386
>gi|391337288|ref|XP_003743002.1| PREDICTED: uncharacterized protein LOC100900541 [Metaseiulus
occidentalis]
Length = 1015
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEK-LRPDH 83
+TCP+C+ DATTI ECLH+FCR CI +S + CPVC L L + LR D
Sbjct: 13 LTCPLCHGYFVDATTIVECLHSFCRTCIIKHLSKNQFPFCPVCKFQLAGTKLHQYLRSDS 72
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 73 TLQDIVYKLVPSLFRNEMKRRR 94
>gi|296088740|emb|CBI38190.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 326 ERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVE 385
R + +WF L AS++Q LPQI SYLRIKD + V + KY++ KL L SESE+E
Sbjct: 240 HRPHSGVWFLLQASQNQAKEPFLPQIPKSYLRIKDGRMTVRLLMKYVVNKLRLDSESEIE 299
Query: 386 IKCMGQPVIPTLQLYNLVD-LWLQTASTSDRVPAMIGSSAKDFVMVLTYAR 435
I C GQ ++P L ++ D +W + + P SS D VMVL Y R
Sbjct: 300 ITCRGQQLLPFFTLQHVRDNIWSPRDALTFLQPD---SSTSDHVMVLNYGR 347
>gi|383858055|ref|XP_003704518.1| PREDICTED: uncharacterized protein LOC100879416 [Megachile
rotundata]
Length = 1378
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C DATTI ECLH+FCR CI + E + CP+C + + PL +RPDH
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYL--ENNKYCPICEVQVHKSKPLLNIRPDH 76
Query: 84 TLQDVRAKIFP------LK-RRKV--KAPEAVPSVTLPVRRKERSLSSL 123
TLQD+ K+ P ++ RR+ K PEA T P R E + S +
Sbjct: 77 TLQDIVYKLVPGCYQNEMRCRREFYSKHPEAYTQATSPEARGEPTESHI 125
>gi|156547031|ref|XP_001601096.1| PREDICTED: hypothetical protein LOC100116657 [Nasonia vitripennis]
Length = 1468
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 20 TIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEK 78
T+ +TC +C DATTI ECLH+FC+ CI + E + CPVC+ + PL
Sbjct: 13 TLNEQLTCKLCGGYFIDATTIIECLHSFCKSCIVKYL--ESNKFCPVCDAQVHKNKPLSN 70
Query: 79 LRPDHTLQDVRAKIFP------LKRRK---VKAPEAVPSVTLPVRRKE 117
+RPD TLQD+ K+ P ++ RK K PE SVT P R E
Sbjct: 71 IRPDQTLQDIVYKLVPGCYQNEMRCRKEFYAKHPEEKNSVTSPEARGE 118
>gi|328793199|ref|XP_397419.4| PREDICTED: hypothetical protein LOC413984 [Apis mellifera]
Length = 1395
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C DATTI ECLH+FCR CI + E + CP+C + + PL +RPDH
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYL--ENNKYCPICEVQVHKSKPLLNIRPDH 76
Query: 84 TLQDVRAKIFP------LK-RRKV--KAPEAVPSVTLPVRRKE 117
TLQD+ K+ P ++ RR+ K PEA T P R E
Sbjct: 77 TLQDIVYKLVPGCYQNEMRCRREFYSKHPEACTQATSPEARGE 119
>gi|209881694|ref|XP_002142285.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557891|gb|EEA07936.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 279
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 3 VEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE 62
+E + + L V + + IA + CP+C R+ATTI ECLHTFC CI + I + E
Sbjct: 23 LETVVTDHGLDVAFRIKVIADLLECPLCKGFFRNATTIKECLHTFCNVCIINYIESGK-E 81
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKR 97
CP C +G P+E L D T+Q++ KIFP R
Sbjct: 82 SCPKCGEYMGVHPIEGLVFDRTIQNITDKIFPQFR 116
>gi|350422954|ref|XP_003493340.1| PREDICTED: hypothetical protein LOC100746991 [Bombus impatiens]
Length = 1391
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C DATTI ECLH+FCR CI + E + CP+C + + PL +RPDH
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYL--ENNKYCPICEVQVHKSKPLLNIRPDH 76
Query: 84 TLQDVRAKIFP------LKRRK---VKAPEAVPSVTLPVRRKE 117
TLQD+ K+ P ++ R+ + PEA T P R E
Sbjct: 77 TLQDIVYKLVPGCYQNEMRCRRDFYLNHPEACTQATSPEARGE 119
>gi|224135939|ref|XP_002327341.1| predicted protein [Populus trichocarpa]
gi|222835711|gb|EEE74146.1| predicted protein [Populus trichocarpa]
Length = 54
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%)
Query: 388 CMGQPVIPTLQLYNLVDLWLQTASTSDRVPAMIGSSAKDFVMVLTYARKVRD 439
C GQPV PTL+L NLV+LW T STS +V A +GSSAKDFVMVL+Y RKV++
Sbjct: 2 CRGQPVSPTLRLQNLVNLWFCTGSTSKKVSASVGSSAKDFVMVLSYCRKVQE 53
>gi|307173961|gb|EFN64691.1| Polycomb complex protein BMI-1 [Camponotus floridanus]
Length = 1468
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C DATTI ECLH+FCR CI + E + CP+C + + PL +RPDH
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYL--ENNKYCPICEVQVHKSRPLLNIRPDH 76
Query: 84 TLQDVRAKIFP 94
TLQD+ K+ P
Sbjct: 77 TLQDIVYKLVP 87
>gi|349500943|dbj|BAL03066.1| LAX PANICLE2 [Oryza sativa Japonica Group]
Length = 394
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
+ P AV AAG +WF L A+ Q LPQI SYLRIKD + V + KY
Sbjct: 276 LPPSAVAAAAG---------VWFVLQAAPLQGREPFLPQIPRSYLRIKDGRVTVRLLTKY 326
Query: 372 LMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVD-LWL-QTASTSDRVPAMIGSSAKDFVM 429
L+ KL L ESEVEI C G+ ++P L L ++ D +W + A + P + + +M
Sbjct: 327 LVNKLGLEDESEVEITCRGRQLLPILTLQHVRDSIWCRRDAVSPSAAPDIPTADHHQHIM 386
Query: 430 VLTYARK 436
VL Y R+
Sbjct: 387 VLQYGRR 393
>gi|307207694|gb|EFN85331.1| Polycomb complex protein BMI-1 [Harpegnathos saltator]
Length = 1474
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C DATTI ECLH+FCR CI + E + CP+C + + PL +RPDH
Sbjct: 19 LTCRLCGGYFIDATTIIECLHSFCRSCIVKYL--ENNKYCPICEVQVHKSKPLLNIRPDH 76
Query: 84 TLQDVRAKIFP 94
TLQD+ K+ P
Sbjct: 77 TLQDIVYKLVP 87
>gi|440799569|gb|ELR20613.1| zinc finger, domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 326
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
+ N++ K + ++ + C +C +LRDA TI ECLHTFC+ C+Y + CP+
Sbjct: 90 LDGRNIIFKTR--LLSGFLVCQLCMGVLRDAHTIRECLHTFCKSCLYKYF--QTTADCPL 145
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIF 93
C +DL P E++R D T+Q + KIF
Sbjct: 146 CGVDLRPNPFERIRFDRTVQTIVNKIF 172
>gi|426232409|ref|XP_004010216.1| PREDICTED: uncharacterized protein LOC101107965 [Ovis aries]
Length = 286
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCGGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRV 130
PL+ + D T+QD+ K+ P ++VK P++ P L + L++ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP-GLQEVKGPQS-PRWDLRAAAVCQGPEPLLLGGPEE 117
Query: 131 SAQTTMTRRRSNAAARKAAALRG----SNLSTDKPPKKEEDSVEDNEDGASS 178
+ + R A+ R ++RG S D PP+ + + GA S
Sbjct: 118 TGD-QLGPGRPAASERTVHSVRGPGSKGTTSRDLPPQPGLGARGRTQTGAGS 168
>gi|198414702|ref|XP_002129324.1| PREDICTED: similar to Polycomb complex protein BMI-1 (Polycomb
group RING finger protein 4) (RING finger protein 51)
[Ciona intestinalis]
Length = 1188
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 11 NLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNID 70
N VK++ + +TC +CN DATTI ECLH+FCR CI + E CPVC +
Sbjct: 2 NRSVKLRVRDLHPHVTCHLCNGYFIDATTIIECLHSFCRTCIVRYL--ENRRSCPVCRVQ 59
Query: 71 LGCV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
+ PL +R D TLQD+ K+ P +KRR+
Sbjct: 60 VHKTRPLLNIRSDQTLQDIVYKLVPGLRSDEMKRRR 95
>gi|380027905|ref|XP_003697655.1| PREDICTED: uncharacterized protein LOC100865279 [Apis florea]
Length = 1303
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C DATTI ECLH+FCR CI + E + CP+C + + PL +RPD+
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCRSCIVKYL--ENNKYCPICEVQVHKSKPLLNIRPDY 76
Query: 84 TLQDVRAKIFP------LK-RRKV--KAPEAVPSVTLPVRRKE 117
TLQD+ K+ P ++ RR+ K PEA T P R E
Sbjct: 77 TLQDIVYKLVPGCYQNEMRCRREFYSKHPEACTQATSPEARGE 119
>gi|326489338|dbj|BAK01652.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 329 NGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKC 388
N +WF A+ Q LPQI SYLRIKD + V + KYL KL L ESEVEI C
Sbjct: 225 NAGVWFVFQAAPHQGREPFLPQIPRSYLRIKDGRVTVRLLIKYLANKLGLEDESEVEITC 284
Query: 389 MGQPVIPTLQLYNLVD-LWLQTASTSDRV-PAMIGSSAKDFVMVLTYARK 436
G+P+ + L ++ D +W Q + S V P M S + +MVL Y R+
Sbjct: 285 RGRPLPQFMTLQHVRDSIWCQRDAVSTSVAPDM---STANHIMVLQYGRR 331
>gi|346468437|gb|AEO34063.1| hypothetical protein [Amblyomma maculatum]
Length = 552
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC +C DATTI ECLH+FC+ CI + E + CPVC++ + PL+ +R D
Sbjct: 16 LTCVLCGGYFVDATTIIECLHSFCKTCIVKYL--EVHKMCPVCDVQVHKTRPLQNIRSDQ 73
Query: 84 TLQDVRAKIFP------LKRRKVKAPEAVPSV 109
TLQD+ K+ P ++RR+ PSV
Sbjct: 74 TLQDIVYKLVPGLYKNEMRRRRQYYASLAPSV 105
>gi|332027981|gb|EGI68032.1| Polycomb complex protein BMI-1 [Acromyrmex echinatior]
Length = 1426
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C DATTI ECLH+FC+ CI + E + CP+C + + PL +RPD+
Sbjct: 19 LTCKLCGGYFIDATTIIECLHSFCKSCIVKYL--ENNKYCPICEVQVHKSRPLLNIRPDY 76
Query: 84 TLQDVRAKIFP------LKRRK---VKAPE 104
LQD+ K+ P ++RR+ K PE
Sbjct: 77 ILQDIVYKLVPGCYQNEMRRRREFYAKHPE 106
>gi|226509593|ref|NP_001142005.1| uncharacterized protein LOC100274155 [Zea mays]
gi|194706760|gb|ACF87464.1| unknown [Zea mays]
gi|413951411|gb|AFW84060.1| hypothetical protein ZEAMMB73_530369 [Zea mays]
Length = 337
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 330 GPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCM 389
G +W +L A+ +Q LPQI+ SYLRIKD N+ V+ + KYL KL + +VE+ C
Sbjct: 211 GGLWLTLRAAPNQIREPVLPQIAKSYLRIKDSNVTVAVVMKYLADKLGITPSHQVELTCR 270
Query: 390 GQPVIPTLQL-YNLVDLWLQTASTSDR-----VPAMI----GSSAKDFVMVLTYA 434
GQ + P L L Y +W TA +R A++ S+A D VM L Y+
Sbjct: 271 GQVLRPLLPLKYVRETIWCSTAPPREREETPPAAALLTSRRSSAATDHVMTLCYS 325
>gi|156372722|ref|XP_001629185.1| predicted protein [Nematostella vectensis]
gi|156216179|gb|EDO37122.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC +C L TTI+ECLHTFCR CI + D E+ CP CNI + PLE LR D
Sbjct: 13 ITCGLCRGYLIKPTTITECLHTFCRSCIILRFQDGEVNLCPTCNILIHETNPLEMLRSDK 72
Query: 84 TLQDVRAKIFP 94
TL+D+ K+ P
Sbjct: 73 TLEDIIYKLVP 83
>gi|325192720|emb|CCA27133.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 239
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKI-SDEEIECCPVCNIDLG 72
V + + I C +CN RDA TI ECLHTFC CI + + CP C++ LG
Sbjct: 22 VSFRYKDINRHFICTLCNGYFRDAQTIKECLHTFCNGCIRSYFWRNRDAHKCPTCSVHLG 81
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKE 117
P +L D ++Q + +KIFP ++ K E L ++RKE
Sbjct: 82 VKPWTQLISDPSIQGLISKIFPDPTQQEKKEELKFYKHLSIKRKE 126
>gi|395543302|ref|XP_003773558.1| PREDICTED: polycomb group RING finger protein 3 [Sarcophilus
harrisii]
Length = 259
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +CN L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 19 LTRKIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 76
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 77 HQSHPLQYIGHDRTMQDIVYKLVP 100
>gi|428168838|gb|EKX37778.1| hypothetical protein GUITHDRAFT_116084 [Guillardia theta
CCMP2712]
Length = 221
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
MT LRDA T++ECLHTFC+ CI S E CP C DLG P EK+R D
Sbjct: 1 MTFQTGMGYLRDAMTVTECLHTFCKPCIMQHFS--EYLTCPTCEKDLGPAPHEKVRTDRA 58
Query: 85 LQDVRAKIFP 94
+Q++ K+FP
Sbjct: 59 MQNIVDKVFP 68
>gi|260817655|ref|XP_002603701.1| hypothetical protein BRAFLDRAFT_126892 [Branchiostoma floridae]
gi|229289023|gb|EEN59712.1| hypothetical protein BRAFLDRAFT_126892 [Branchiostoma floridae]
Length = 628
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
AS V VK I + C +C DATT++ECLHTFC+ CI + + CP+
Sbjct: 404 FASPYKFVMVKICDINPHIVCILCAGYFIDATTVTECLHTFCKSCIVKYLQTSKF--CPM 461
Query: 67 CNIDLG-CVPLEKLRPDHTLQDVRAKIFP 94
CNI + PL LRPD T+QD+ K+ P
Sbjct: 462 CNIKIHETQPLLNLRPDRTMQDIVYKVVP 490
>gi|449274339|gb|EMC83581.1| Polycomb group RING finger protein 3 [Columba livia]
Length = 250
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +CN L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 10 LTRKIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 67
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 68 HQSHPLQYIGHDRTMQDIVYKLVP 91
>gi|242059757|ref|XP_002459024.1| hypothetical protein SORBIDRAFT_03g044690 [Sorghum bicolor]
gi|241930999|gb|EES04144.1| hypothetical protein SORBIDRAFT_03g044690 [Sorghum bicolor]
Length = 328
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQ 391
+W +L A+ +Q LPQI+ SYLRIKD N+ V + KYL KL + +VE+ C GQ
Sbjct: 209 LWLTLQAAPNQIREPILPQIAKSYLRIKDSNMKVEVVMKYLAEKLGIARSHQVELTCRGQ 268
Query: 392 PVIPTLQLYNLV--DLWLQTA---STSDRVPAMIGSSAKDFVMVLTYA 434
V+P L L V +W TA +D + + S+A D VM L Y+
Sbjct: 269 -VLPPLLLVKCVRETIWCSTALREEEADDLTSRRSSAATDHVMTLCYS 315
>gi|126332046|ref|XP_001366269.1| PREDICTED: polycomb group RING finger protein 3-like [Monodelphis
domestica]
Length = 242
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +CN L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|345330019|ref|XP_001514398.2| PREDICTED: polycomb group RING finger protein 3-like
[Ornithorhynchus anatinus]
Length = 242
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +CN L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|118104286|ref|XP_424870.2| PREDICTED: polycomb group RING finger protein 3 [Gallus gallus]
Length = 242
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +CN L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|449513766|ref|XP_002187550.2| PREDICTED: polycomb group RING finger protein 3-like [Taeniopygia
guttata]
Length = 242
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +CN L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|327277255|ref|XP_003223381.1| PREDICTED: polycomb group RING finger protein 3-like [Anolis
carolinensis]
Length = 242
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +CN L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|158295814|ref|XP_001237808.2| AGAP006403-PA [Anopheles gambiae str. PEST]
gi|157016217|gb|EAU76594.2| AGAP006403-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
+VK ++ C+TC +C L DATTI ECLH+FC CI + E+ CP C + +
Sbjct: 87 RVKLGSVHPCITCHLCKGYLIDATTIVECLHSFCHSCIMKHLRTEQY--CPQCEMMINKA 144
Query: 75 PLEKLRPDHTLQDVRAKIFP------LKRRKV 100
++PD TLQ + K+ P L+RR+
Sbjct: 145 -KPNIKPDATLQAIVYKLVPRLYENELRRRRA 175
>gi|348679361|gb|EGZ19177.1| hypothetical protein PHYSODRAFT_490527 [Phytophthora sojae]
Length = 253
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
MA + V VK + + C +C+ +LRDA TI +CLH+FC+ CIY + CP
Sbjct: 1 MALDARTVTVKLAELTEHLGCALCHGILRDAHTIPDCLHSFCKSCIYRHFLVKGSCVCPK 60
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
CN L P+ L D LQ+V +IFP
Sbjct: 61 CNKTLSPRPITTLITDQKLQEVVDRIFP 88
>gi|62857441|ref|NP_001016847.1| polycomb group RING finger protein 3 [Xenopus (Silurana)
tropicalis]
gi|123884065|sp|Q07G17.1|PCGF3_XENTR RecName: Full=Polycomb group RING finger protein 3
gi|115530807|emb|CAL49402.1| polycomb group ring finger 3 [Xenopus (Silurana) tropicalis]
gi|197246226|gb|AAI68795.1| polycomb group ring finger 3 [Xenopus (Silurana) tropicalis]
Length = 242
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +CN L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|242021573|ref|XP_002431219.1| Polycomb group RING finger protein, putative [Pediculus humanus
corporis]
gi|212516468|gb|EEB18481.1| Polycomb group RING finger protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
++K +T+ + +TC IC L DATT++ECLHTFC+ C+ + EE CP CNI +
Sbjct: 4 RIKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHL--EENNTCPTCNIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|301105835|ref|XP_002902001.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099339|gb|EEY57391.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 252
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 12 LVVKVKRET-----IAACMTCPICNTLLRDATTISECLHTFCRKCIYDK-ISDEEIECCP 65
L V+ + ET I C +C RD T ECLHTFC CI + +I CP
Sbjct: 22 LFVEARTETLRMANINEFFICKLCKGYFRDPYTSKECLHTFCYGCIRGYYLYHPKISSCP 81
Query: 66 VCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKE 117
C ++LG P+ KL PD ++++ +K P K A E + + ++RK+
Sbjct: 82 TCKLNLGAKPMAKLLPDPAMKELASKFLPDYTAKEDAEERLYYMKFGIKRKQ 133
>gi|390461119|ref|XP_002746106.2| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Callithrix jacchus]
Length = 323
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 83 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 140
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 141 HQSHPLQYIGHDRTMQDIVYKLVP 164
>gi|432091208|gb|ELK24417.1| Polycomb group RING finger protein 3 [Myotis davidii]
Length = 298
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 58 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 115
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 116 HQSHPLQYIGHDRTMQDIVYKLVP 139
>gi|427791005|gb|JAA60954.1| Putative b lymphoma mo-mlv insertion region 1b, partial
[Rhipicephalus pulchellus]
Length = 596
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 12/114 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC +CN L DATT+ ECLH+FC+ CI ++ + CP+C++ + P + +R D
Sbjct: 61 ITCMLCNGYLVDATTLVECLHSFCKVCIVQFLNTSLL--CPICDVPVHQTKPHQSIRLDR 118
Query: 84 TLQDVRAKIFP------LKRRK---VKAPEAVPSVTLPVRRKERSLSSLVVSAP 128
TLQD+ K+ P +K+R+ K PE SV+ P R SS ++ +P
Sbjct: 119 TLQDIVYKVVPGLYQKEMKKRRDYYKKHPEHAASVSCPEDRGIVDDSSRLIFSP 172
>gi|417408991|gb|JAA51023.1| Putative polycomb group ring finger protein 3, partial [Desmodus
rotundus]
Length = 246
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 6 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 63
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 64 HQSHPLQYIGHDRTMQDIVYKLVP 87
>gi|395734650|ref|XP_003776452.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Pongo abelii]
Length = 323
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 83 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 140
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 141 HQSHPLQYIGHDRTMQDIVYKLVP 164
>gi|167533065|ref|XP_001748213.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773333|gb|EDQ86974.1| predicted protein [Monosiga brevicollis MX1]
Length = 381
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
++VK + + C IC + +ATTISECLH+FCR CI +I CPVCN
Sbjct: 156 LRVKMVDVNQYIVCQICMGYIVNATTISECLHSFCRSCIVKHFRKSKI--CPVCNQQAHE 213
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL+ LR D TLQ + K+ P
Sbjct: 214 TAPLDTLRQDRTLQSIINKLLP 235
>gi|350529342|ref|NP_001089498.2| polycomb group RING finger protein 1 [Xenopus laevis]
gi|223590126|sp|Q4QR06.2|PCGF1_XENLA RecName: Full=Polycomb group RING finger protein 1
Length = 259
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
N VVKVK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI
Sbjct: 28 NEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPLCNI 85
Query: 70 DLG-CVPLEKLRPDHTLQDVRAKIFP 94
+ PL L+ D +QD+ K+ P
Sbjct: 86 KIHETQPLLNLKLDRVMQDIVYKLVP 111
>gi|444729340|gb|ELW69763.1| Polycomb group RING finger protein 3 [Tupaia chinensis]
Length = 345
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|189441945|gb|AAI67306.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 249
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
N VVKVK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI
Sbjct: 18 NEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPLCNI 75
Query: 70 DLG-CVPLEKLRPDHTLQDVRAKIFP 94
+ PL L+ D +QD+ K+ P
Sbjct: 76 KIHETQPLLNLKLDRVMQDIVYKLVP 101
>gi|194390576|dbj|BAG62047.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 84 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 141
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 142 HQSHPLQYIGHDRTMQDIVYKLVP 165
>gi|403286806|ref|XP_003934663.1| PREDICTED: polycomb group RING finger protein 3 [Saimiri
boliviensis boliviensis]
Length = 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 35 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 92
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 93 HQSHPLQYIGHDRTMQDIVYKLVP 116
>gi|350529343|ref|NP_001016417.2| polycomb group RING finger protein 1 [Xenopus (Silurana)
tropicalis]
gi|123893179|sp|Q28H21.1|PCGF1_XENTR RecName: Full=Polycomb group RING finger protein 1
gi|89273860|emb|CAJ81866.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 259
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
N VVKVK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI
Sbjct: 28 NEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPLCNI 85
Query: 70 DLG-CVPLEKLRPDHTLQDVRAKIFP 94
+ PL L+ D +QD+ K+ P
Sbjct: 86 KIHETQPLLNLKLDRVMQDIVYKLVP 111
>gi|67678255|gb|AAH97736.1| MGC115420 protein [Xenopus laevis]
Length = 249
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
N VVKVK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI
Sbjct: 18 NEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPLCNI 75
Query: 70 DLG-CVPLEKLRPDHTLQDVRAKIFP 94
+ PL L+ D +QD+ K+ P
Sbjct: 76 KIHETQPLLNLKLDRVMQDIVYKLVP 101
>gi|332818893|ref|XP_003339483.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Pan troglodytes]
Length = 329
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 89 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 146
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 147 HQSHPLQYIGHDRTMQDIVYKLVP 170
>gi|213624162|gb|AAI70727.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
gi|213625506|gb|AAI70753.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 249
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
N VVKVK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI
Sbjct: 18 NEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPLCNI 75
Query: 70 DLG-CVPLEKLRPDHTLQDVRAKIFP 94
+ PL L+ D +QD+ K+ P
Sbjct: 76 KIHETQPLLNLKLDRVMQDIVYKLVP 101
>gi|148688164|gb|EDL20111.1| polycomb group ring finger 3, isoform CRA_c [Mus musculus]
Length = 253
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 14 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 71
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 72 HQSHPLQYIGHDRTMQDIVYKLVP 95
>gi|348684604|gb|EGZ24419.1| hypothetical protein PHYSODRAFT_478652 [Phytophthora sojae]
Length = 251
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYD-KISDEEIEC-CPVCNIDLGCVPLEKLRPD 82
+ C +C LRD T+ ECLHTFC CI + D C CP C++ LG P + PD
Sbjct: 38 LICKLCKGYLRDPYTVKECLHTFCHGCIRGFYLYDSTKSCSCPTCHVRLGAKPWAHIIPD 97
Query: 83 HTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRK 116
++++ K+ P R K + E+V L ++RK
Sbjct: 98 PAMKELTEKLLPDYRAKEEEEESVFYAKLGIKRK 131
>gi|344279068|ref|XP_003411313.1| PREDICTED: polycomb group RING finger protein 3-like [Loxodonta
africana]
Length = 242
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|328713971|ref|XP_001946307.2| PREDICTED: hypothetical protein LOC100161947 [Acyrthosiphon
pisum]
Length = 608
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+ C +C DATT+ ECLH+FCR CI + E + CP+C++ + PL +RPDH
Sbjct: 15 LLCVLCGGYFVDATTVIECLHSFCRSCIVKYL--ERNKYCPICDVLVHKSKPLSNIRPDH 72
Query: 84 TLQDVRAKIFP 94
TLQ++ K+ P
Sbjct: 73 TLQNIVYKLVP 83
>gi|242009130|ref|XP_002425345.1| polycomb complex protein bmi-1, putative [Pediculus humanus
corporis]
gi|212509130|gb|EEB12607.1| polycomb complex protein bmi-1, putative [Pediculus humanus
corporis]
Length = 886
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 11 NLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNID 70
N + K+K + + C +C DATTI ECLH+FCR CI + E + CP+C +
Sbjct: 5 NSIHKLKLLDLNPHLMCVLCGGYYIDATTIVECLHSFCRSCIVKHL--ESSKYCPICEVQ 62
Query: 71 LGCV-PLEKLRPDHTLQDVRAKIFP 94
+ PL +RPD TLQ++ K+ P
Sbjct: 63 VHKTKPLLNIRPDKTLQNIVYKLVP 87
>gi|148688165|gb|EDL20112.1| polycomb group ring finger 3, isoform CRA_d [Mus musculus]
Length = 249
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|291415352|ref|XP_002723916.1| PREDICTED: ring finger protein 3 [Oryctolagus cuniculus]
Length = 242
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|322791296|gb|EFZ15813.1| hypothetical protein SINV_04327 [Solenopsis invicta]
Length = 1427
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +RPD
Sbjct: 19 LICKLCGGYFIDATTIIECLHSFCKSCIVKYL--ENNKYCPICDVQIHKSRPLLNIRPDR 76
Query: 84 TLQDVRAKIFP 94
LQD+ K+ P
Sbjct: 77 MLQDIVYKLVP 87
>gi|149028673|gb|EDL84014.1| ring finger protein 3 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 203
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|91076158|ref|XP_971006.1| PREDICTED: similar to ring finger protein [Tribolium castaneum]
Length = 224
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
++K +T+ + +TC IC L DATT++ECLHTFC+ C+ + EE CP CNI +
Sbjct: 4 RIKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHL--EENNTCPTCNIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|26329299|dbj|BAC28388.1| unnamed protein product [Mus musculus]
gi|148688162|gb|EDL20109.1| polycomb group ring finger 3, isoform CRA_a [Mus musculus]
Length = 178
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|348558585|ref|XP_003465098.1| PREDICTED: polycomb group RING finger protein 3-like [Cavia
porcellus]
Length = 241
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|354480425|ref|XP_003502408.1| PREDICTED: polycomb group RING finger protein 3-like [Cricetulus
griseus]
gi|344251876|gb|EGW07980.1| Polycomb group RING finger protein 3 [Cricetulus griseus]
gi|351704099|gb|EHB07018.1| Polycomb group RING finger protein 3 [Heterocephalus glaber]
Length = 241
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|31044444|ref|NP_766304.2| polycomb group RING finger protein 3 [Mus musculus]
gi|325974486|ref|NP_001100715.2| polycomb group RING finger protein 3 [Rattus norvegicus]
gi|81897475|sp|Q8BTQ0.1|PCGF3_MOUSE RecName: Full=Polycomb group RING finger protein 3; AltName:
Full=RING finger protein 3A
gi|26354234|dbj|BAC40745.1| unnamed protein product [Mus musculus]
gi|29165843|gb|AAH49266.1| Pcgf3 protein [Mus musculus]
gi|187469279|gb|AAI67000.1| Pcgf3 protein [Rattus norvegicus]
Length = 241
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|149028672|gb|EDL84013.1| ring finger protein 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 159
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|291230597|ref|XP_002735252.1| PREDICTED: ring finger protein 110-like [Saccoglossus kowalevskii]
Length = 345
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 11 NLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNID 70
N K+K + + C +C DATTI ECLH+FCR CI + E + CPVC+
Sbjct: 52 NRTTKLKMTELNPHLMCVLCGGYFIDATTIIECLHSFCRTCIIRYL--ESSKYCPVCDTQ 109
Query: 71 LGCV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
+ PL+ +RPD TLQ++ K+ P +KRR+
Sbjct: 110 VHKTRPLQYIRPDRTLQNIVYKLVPGLFRDEMKRRR 145
>gi|2440074|emb|CAA04477.1| ring finger protein [Homo sapiens]
Length = 247
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 7 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 64
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 65 HQSHPLQYIGHDRTMQDIVYKLVP 88
>gi|350587274|ref|XP_003356878.2| PREDICTED: polycomb group RING finger protein 3-like [Sus scrofa]
Length = 202
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|301778068|ref|XP_002924449.1| PREDICTED: polycomb group RING finger protein 3-like [Ailuropoda
melanoleuca]
gi|281343092|gb|EFB18676.1| hypothetical protein PANDA_013795 [Ailuropoda melanoleuca]
Length = 242
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|194209404|ref|XP_001488220.2| PREDICTED: polycomb group RING finger protein 3-like [Equus
caballus]
Length = 242
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|31742478|ref|NP_006306.2| polycomb group RING finger protein 3 [Homo sapiens]
gi|384475911|ref|NP_001245100.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|332263104|ref|XP_003280595.1| PREDICTED: polycomb group RING finger protein 3 isoform 1
[Nomascus leucogenys]
gi|397480144|ref|XP_003811352.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Pan
paniscus]
gi|402852538|ref|XP_003890977.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Papio
anubis]
gi|402852540|ref|XP_003890978.1| PREDICTED: polycomb group RING finger protein 3 isoform 2 [Papio
anubis]
gi|426343538|ref|XP_004038353.1| PREDICTED: polycomb group RING finger protein 3 isoform 1
[Gorilla gorilla gorilla]
gi|121942537|sp|Q3KNV8.1|PCGF3_HUMAN RecName: Full=Polycomb group RING finger protein 3; AltName:
Full=RING finger protein 3A
gi|76825323|gb|AAI07062.1| Polycomb group ring finger 3 [Homo sapiens]
gi|119603058|gb|EAW82652.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|119603059|gb|EAW82653.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|119603062|gb|EAW82656.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|343960921|dbj|BAK62050.1| RING finger protein 3 [Pan troglodytes]
gi|355557419|gb|EHH14199.1| RING finger protein 3A [Macaca mulatta]
gi|355744818|gb|EHH49443.1| RING finger protein 3A [Macaca fascicularis]
gi|380784337|gb|AFE64044.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|383413781|gb|AFH30104.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|384940124|gb|AFI33667.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|410218840|gb|JAA06639.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410250096|gb|JAA13015.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410300194|gb|JAA28697.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410339339|gb|JAA38616.1| polycomb group ring finger 3 [Pan troglodytes]
Length = 242
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|355709612|gb|AES03650.1| polycomb group ring finger 3 [Mustela putorius furo]
Length = 245
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 5 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 62
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 63 HQSHPLQYIGHDRTMQDIVYKLVP 86
>gi|345798510|ref|XP_855151.2| PREDICTED: polycomb group RING finger protein 3 [Canis lupus
familiaris]
Length = 242
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|410958096|ref|XP_003985657.1| PREDICTED: polycomb group RING finger protein 3 [Felis catus]
Length = 242
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|114052975|ref|NP_001040032.1| polycomb group RING finger protein 3 [Bos taurus]
gi|122136146|sp|Q2KJ29.1|PCGF3_BOVIN RecName: Full=Polycomb group RING finger protein 3
gi|86822076|gb|AAI05551.1| Polycomb group ring finger 3 [Bos taurus]
gi|440911090|gb|ELR60815.1| Polycomb group RING finger protein 3 [Bos grunniens mutus]
Length = 242
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|431897351|gb|ELK06613.1| Polycomb group RING finger protein 3 [Pteropus alecto]
Length = 226
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP-LKRRKVKAPEA 105
PL+ + D T+QD+ K+ P L+ + KA ++
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVPGLQEGETKADDS 95
>gi|405957199|gb|EKC23428.1| Polycomb complex protein BMI-1 [Crassostrea gigas]
Length = 894
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C L DATTI ECLH+FC+ CI + E + CP+C++ + P +R DH
Sbjct: 11 LICVLCGGYLIDATTIVECLHSFCKTCIVRYL--ETSKFCPICDVQVHKTKPFTNIRLDH 68
Query: 84 TLQDVRAKIFP 94
TLQD+ K+ P
Sbjct: 69 TLQDLVYKLVP 79
>gi|427795849|gb|JAA63376.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 2649
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 24 CMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLE-KLRPD 82
C+TC +C L DA T+ +CLH+FCR CI + E CPVC++ L + +E L D
Sbjct: 50 CLTCKLCKGYLVDAMTLVKCLHSFCRSCILKHL--ETGHACPVCDLRLSKINMESHLIKD 107
Query: 83 HTLQDVRAKIFP------LKRRK 99
TLQ+V K P +KRR+
Sbjct: 108 DTLQNVVYKAVPGLYQKEMKRRR 130
>gi|427796033|gb|JAA63468.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 2630
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 24 CMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLE-KLRPD 82
C+TC +C L DA T+ +CLH+FCR CI + E CPVC++ L + +E L D
Sbjct: 31 CLTCKLCKGYLVDAMTLVKCLHSFCRSCILKHL--ETGHACPVCDLRLSKINMESHLIKD 88
Query: 83 HTLQDVRAKIFP------LKRRK 99
TLQ+V K P +KRR+
Sbjct: 89 DTLQNVVYKAVPGLYQKEMKRRR 111
>gi|357624741|gb|EHJ75399.1| hypothetical protein KGM_03599 [Danaus plexippus]
Length = 310
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
++K +T+ + +TC IC DATT++ECLHTFC+ C+ + EE CP CNI +
Sbjct: 4 RIKLKTLNSHITCKICRGYFIDATTVTECLHTFCKSCLVKHL--EENNTCPTCNIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|390352349|ref|XP_783799.2| PREDICTED: polycomb group RING finger protein 2-like
[Strongylocentrotus purpuratus]
Length = 479
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 16/107 (14%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIECCPVCNIDLGCV-PLEKLRP 81
+TC +C + DAT+I ECLH+FCR CI Y S + CPVC+ + PL +R
Sbjct: 16 LTCSLCKGYIVDATSIIECLHSFCRSCIVRYLHTSKQ----CPVCDTQVHKTRPLLNIRS 71
Query: 82 DHTLQDVRAKIFP------LKRRK---VKAPEAVPSVTLPVRRKERS 119
D TLQ++ K+ P +KRR+ P+A S+ V R+ER
Sbjct: 72 DKTLQNLVYKLVPSMFKGEMKRRREFYKSHPQASTSLAQTVSREERG 118
>gi|427792783|gb|JAA61843.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 2166
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 24 CMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLE-KLRPD 82
C+TC +C L DA T+ +CLH+FCR CI + E CPVC++ L + +E L D
Sbjct: 8 CLTCKLCKGYLVDAMTLVKCLHSFCRSCILKHL--ETGHACPVCDLRLSKINMESHLIKD 65
Query: 83 HTLQDVRAKIFP------LKRRK 99
TLQ+V K P +KRR+
Sbjct: 66 DTLQNVVYKAVPGLYQKEMKRRR 88
>gi|307182744|gb|EFN69868.1| Polycomb group RING finger protein 3 [Camponotus floridanus]
Length = 226
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
++K +T+ + +TC IC L DATT++ECLHTFC+ C+ + EE CP C I +
Sbjct: 4 RIKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHL--EEKHTCPTCQIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|302782806|ref|XP_002973176.1| hypothetical protein SELMODRAFT_413683 [Selaginella moellendorffii]
gi|300158929|gb|EFJ25550.1| hypothetical protein SELMODRAFT_413683 [Selaginella moellendorffii]
Length = 767
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 348 LPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVD-LW 406
LPQ+ YLR+KD +PVS ++KYL+ KL L ESEVEI C GQ + P L L ++ D +W
Sbjct: 630 LPQVPKGYLRVKDGAVPVSHVKKYLVHKLGLSCESEVEISCRGQLLQPGLSLQHVRDVIW 689
>gi|332022202|gb|EGI62517.1| Polycomb group RING finger protein 3 [Acromyrmex echinatior]
Length = 226
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
++K +T+ + +TC IC L DATT++ECLHTFC+ C+ + EE CP C I +
Sbjct: 4 RIKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHL--EEKHTCPTCQIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|307193493|gb|EFN76270.1| Polycomb group RING finger protein 3 [Harpegnathos saltator]
Length = 226
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
++K +T+ + +TC IC L DATT++ECLHTFC+ C+ + EE CP C I +
Sbjct: 4 RIKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHL--EEKHTCPTCQIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|405952037|gb|EKC19894.1| Polycomb group RING finger protein 3 [Crassostrea gigas]
Length = 1074
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
KVK +T+ + C +C L +ATTI+ECLHTFC+ CI + E + CP C+I +
Sbjct: 5 KVKLKTVNPHICCTLCKGYLVEATTITECLHTFCKSCIVGYLKKE--KNCPKCDILIHQS 62
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL + D T+QD+ K+ P
Sbjct: 63 HPLNYISHDRTMQDIVYKLVP 83
>gi|296486315|tpg|DAA28428.1| TPA: polycomb group RING finger protein 3 [Bos taurus]
Length = 179
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|297266344|ref|XP_001105519.2| PREDICTED: polycomb group RING finger protein 1-like [Macaca
mulatta]
Length = 394
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|405966171|gb|EKC31483.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V ++ + + CPIC +L++ T ECLH FC+ CI +
Sbjct: 22 RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A +A L + +L+
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQARVLAKLNKQHSTSALT 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALR-GSNLSTDKPPKKEEDSVEDNEDGASS 178
S + RV A + R R +A + L SN S++ P K ++ D+ +S
Sbjct: 138 SSIEEGLRVQALSRPQRVRKHATEPDLSRLETASNASSENTPLKRPKTLSDDSSAENS 195
>gi|405976877|gb|EKC41356.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V ++ + + CPIC +L++ T ECLH FC+ CI +
Sbjct: 22 RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A +A L + +L+
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQARVLAKLNKQHSTSALT 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALR-GSNLSTDKPPKKEEDSVEDNEDGASS 178
S + RV A + R R +A + L SN S++ P K ++ D+ +S
Sbjct: 138 SSIEEGLRVQALSRPQRVRKHATEPDLSRLETASNASSENTPLKRPKTLSDDSSAENS 195
>gi|328776963|ref|XP_001120353.2| PREDICTED: polycomb group RING finger protein 3-like [Apis
mellifera]
gi|340728415|ref|XP_003402520.1| PREDICTED: polycomb group RING finger protein 3-like [Bombus
terrestris]
gi|350405292|ref|XP_003487388.1| PREDICTED: polycomb group RING finger protein 3-like [Bombus
impatiens]
gi|380024257|ref|XP_003695920.1| PREDICTED: polycomb group RING finger protein 3-like [Apis
florea]
Length = 230
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
++K +T+ + +TC IC L DATT++ECLHTFC+ C+ + EE CP C I +
Sbjct: 10 RIKLKTLNSHITCKICKGYLIDATTVTECLHTFCKSCLVKHL--EEKHTCPTCQIVIHQS 67
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 68 HPLQYISFDRTMQDIVYKLVP 88
>gi|156408748|ref|XP_001642018.1| predicted protein [Nematostella vectensis]
gi|156229159|gb|EDO49955.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ + + ++ + + CPIC +L++ T ECLH FC++CI +
Sbjct: 25 RTPQEAITDGTEISISPRSLHSELMCPICLDMLKNTMTTKECLHRFCQECIITALRSGNK 84
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + AKI+P R + +A + L +++L+
Sbjct: 85 E-CPTCRKKL--VSKRSLRPDPNFDALIAKIYP-DREEYEAHQEKVLQRLSKHHNQQALT 140
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARK-----AAALRGSNLSTDKPPKK----EEDSVEDN 172
S + ++ A R R ++ + AA GS T++ +K E D+ E+
Sbjct: 141 SSIEEGLKLQAMNRAQRVRKRSSEEQGHAPIAATAEGSTTPTNRKRQKANSDESDASENT 200
Query: 173 EDGASSPETLNKLSQNVKPMQSSSSAQPSQPISSKEKDNDAE 214
D S+ E N+ S+NV ++ P KD+D E
Sbjct: 201 FD--STGEASNEASENVSEIELVFKPHP--------KDHDPE 232
>gi|383866191|ref|XP_003708554.1| PREDICTED: polycomb group RING finger protein 3-like [Megachile
rotundata]
Length = 230
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
++K +T+ + +TC IC L DATT++ECLHTFC+ C+ + EE CP C I +
Sbjct: 10 RIKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHL--EEKHTCPTCQIVIHQS 67
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 68 HPLQYISFDRTMQDIVYKLVP 88
>gi|321476883|gb|EFX87843.1| hypothetical protein DAPPUDRAFT_43185 [Daphnia pulex]
Length = 238
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C L DATTI+ECLH+FCR C+ ++ E CP C++ L P +LR D+
Sbjct: 21 LICTVCKGYLVDATTITECLHSFCRSCVVPHVA--EFHQCPSCSVPLSTTKPFSQLRRDY 78
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQ + K+ P L RRK
Sbjct: 79 TLQSIVYKMVPRLARNELDRRK 100
>gi|241707385|ref|XP_002413296.1| DNA-binding protein mel-18, putative [Ixodes scapularis]
gi|215507110|gb|EEC16604.1| DNA-binding protein mel-18, putative [Ixodes scapularis]
Length = 1230
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 20 TIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLE-K 78
++ +C++CP+C L DA T+ +CLH+FC+ CI + E CPVC + L + +E +
Sbjct: 39 SLNSCLSCPLCRGYLVDAVTLVKCLHSFCKSCILKHL--ETGSSCPVCELRLSKINMEVQ 96
Query: 79 LRPDHTLQDVRAKIFP 94
LR D LQ++ K P
Sbjct: 97 LRRDEILQNIVYKAIP 112
>gi|297846562|ref|XP_002891162.1| hypothetical protein ARALYDRAFT_891150 [Arabidopsis lyrata subsp.
lyrata]
gi|297337004|gb|EFH67421.1| hypothetical protein ARALYDRAFT_891150 [Arabidopsis lyrata subsp.
lyrata]
Length = 125
Score = 65.5 bits (158), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 26 TCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT- 84
+C IC LL AT + C H FC +CIY KI+ + +CCPVC +D G PL LR D
Sbjct: 10 SCAICYNLLDQATALKRCNHIFCLRCIYGKITQHDWKCCPVCYVDFGPDPLRILRHDDPL 69
Query: 85 -LQDVRAKIFP 94
L R +FP
Sbjct: 70 LLSVERNNLFP 80
>gi|17864614|ref|NP_524933.1| lethal (3) 73Ah, isoform A [Drosophila melanogaster]
gi|386771259|ref|NP_001246797.1| lethal (3) 73Ah, isoform B [Drosophila melanogaster]
gi|195328175|ref|XP_002030792.1| GM25646 [Drosophila sechellia]
gi|195375022|ref|XP_002046302.1| GJ12822 [Drosophila virilis]
gi|195495076|ref|XP_002095113.1| GE19864 [Drosophila yakuba]
gi|195590859|ref|XP_002085162.1| GD14649 [Drosophila simulans]
gi|7294087|gb|AAF49442.1| lethal (3) 73Ah, isoform A [Drosophila melanogaster]
gi|17945187|gb|AAL48652.1| RE11339p [Drosophila melanogaster]
gi|194119735|gb|EDW41778.1| GM25646 [Drosophila sechellia]
gi|194153460|gb|EDW68644.1| GJ12822 [Drosophila virilis]
gi|194181214|gb|EDW94825.1| GE19864 [Drosophila yakuba]
gi|194197171|gb|EDX10747.1| GD14649 [Drosophila simulans]
gi|220942418|gb|ACL83752.1| l(3)73Ah-PA [synthetic construct]
gi|383291967|gb|AFH04468.1| lethal (3) 73Ah, isoform B [Drosophila melanogaster]
Length = 222
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
+VK +TI +TC IC DATT++ECLHTFC+ C+ + EE + CP C NI
Sbjct: 4 RVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHL--EEKKTCPTCDNIIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|194750671|ref|XP_001957653.1| GF23921 [Drosophila ananassae]
gi|190624935|gb|EDV40459.1| GF23921 [Drosophila ananassae]
Length = 222
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
+VK +TI +TC IC DATT++ECLHTFC+ C+ + EE + CP C NI
Sbjct: 4 RVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHL--EEKKTCPTCDNIIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|332375530|gb|AEE62906.1| unknown [Dendroctonus ponderosae]
Length = 225
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
K+K +T+ +TC IC L DATT++ECLHTFC+ C+ + EE CP C I +
Sbjct: 6 KIKLKTLNNHITCKICRGYLIDATTVTECLHTFCKSCLVKHL--EENNTCPTCKIVIHQS 63
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 64 HPLQYISFDRTMQDIVYKLVP 84
>gi|395857624|ref|XP_003804043.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Otolemur garnettii]
Length = 291
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L KV+ I A +TC +C+ L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 51 LTRKVRLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 108
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 109 HQSHPLQYIGHDRTMQDIVYKLVP 132
>gi|194872572|ref|XP_001973039.1| GG13566 [Drosophila erecta]
gi|195135533|ref|XP_002012187.1| GI16570 [Drosophila mojavensis]
gi|190654822|gb|EDV52065.1| GG13566 [Drosophila erecta]
gi|193918451|gb|EDW17318.1| GI16570 [Drosophila mojavensis]
Length = 222
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
+VK +TI +TC IC DATT++ECLHTFC+ C+ + EE + CP C NI
Sbjct: 4 RVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHL--EEKKTCPTCDNIIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|125977120|ref|XP_001352593.1| GA18020 [Drosophila pseudoobscura pseudoobscura]
gi|195168123|ref|XP_002024881.1| GL17870 [Drosophila persimilis]
gi|54641341|gb|EAL30091.1| GA18020 [Drosophila pseudoobscura pseudoobscura]
gi|194108311|gb|EDW30354.1| GL17870 [Drosophila persimilis]
Length = 222
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
+VK +TI +TC IC DATT++ECLHTFC+ C+ + EE + CP C NI
Sbjct: 4 RVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHL--EEKKTCPTCDNIIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|195441687|ref|XP_002068634.1| GK20319 [Drosophila willistoni]
gi|194164719|gb|EDW79620.1| GK20319 [Drosophila willistoni]
Length = 222
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
+VK +TI +TC IC DATT++ECLHTFC+ C+ + EE + CP C NI
Sbjct: 4 RVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHL--EEKKTCPTCDNIIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|348511775|ref|XP_003443419.1| PREDICTED: polycomb group RING finger protein 3-like [Oreochromis
niloticus]
Length = 241
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+K I A +TC +C L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 2 LTRKIKLCHINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 59
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 60 HQSHPLQYIGHDRTMQDIVYKLVP 83
>gi|344255690|gb|EGW11794.1| Polycomb group RING finger protein 1 [Cricetulus griseus]
Length = 512
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 79
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 80 TQPLLNLKLDRVMQDIVYKLVP 101
>gi|156372728|ref|XP_001629188.1| predicted protein [Nematostella vectensis]
gi|156216182|gb|EDO37125.1| predicted protein [Nematostella vectensis]
Length = 92
Score = 65.1 bits (157), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC +C L TTI+ECLHTFC+ CI + D E CP CN + P + LR D
Sbjct: 6 ITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSCNTVIHETNPFDLLRSDQ 65
Query: 84 TLQDVRAKIFP 94
TL+D+ K+ P
Sbjct: 66 TLEDIVFKLVP 76
>gi|193643640|ref|XP_001947143.1| PREDICTED: polycomb group RING finger protein 3-like
[Acyrthosiphon pisum]
Length = 224
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CV 74
+K +T+ +TC IC L DATT++ECLHTFC+ C+ + EE CP C I +
Sbjct: 5 IKLKTLNCHITCKICRGYLVDATTVTECLHTFCKSCLVKHL--EENNSCPTCQIVIHQSH 62
Query: 75 PLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 63 PLQYISFDRTMQDIVFKLVP 82
>gi|91084985|ref|XP_972531.1| PREDICTED: similar to B lymphoma Mo-MLV insertion region (mouse)
[Tribolium castaneum]
gi|270008538|gb|EFA04986.1| hypothetical protein TcasGA2_TC015065 [Tribolium castaneum]
Length = 328
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+ C +C DATTI ECLH+FCR CI ++ + CPVC++ + PL +R D
Sbjct: 16 LICKLCKGYFVDATTIIECLHSFCRSCIVKYLAANKY--CPVCDVQVHKSKPLLNIRQDR 73
Query: 84 TLQDVRAKIFP------LKRRK---VKAPEAVPSV 109
TLQD+ K+ P ++RR+ PEA P++
Sbjct: 74 TLQDIVYKLVPRLFQNEVQRRRDFYKTHPEAKPNL 108
>gi|444723342|gb|ELW63999.1| Polycomb group RING finger protein 1 [Tupaia chinensis]
Length = 456
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 79
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 80 TQPLLNLKLDRVMQDIVYKLVP 101
>gi|55742258|ref|NP_001007159.1| polycomb group RING finger protein 1 [Danio rerio]
gi|82209850|sp|Q7ZYZ7.1|PCGF1_DANRE RecName: Full=Polycomb group RING finger protein 1
gi|126631863|gb|AAI34013.1| Polycomb group ring finger 1 [Danio rerio]
Length = 261
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
VK+K + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 32 VKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 89
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 90 TQPLLNLKLDRVMQDIVYKLVP 111
>gi|390335217|ref|XP_003724093.1| PREDICTED: polycomb group RING finger protein 1-like
[Strongylocentrotus purpuratus]
gi|390369992|ref|XP_003731748.1| PREDICTED: polycomb group RING finger protein 1-like
[Strongylocentrotus purpuratus]
Length = 241
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
+K+K + + C +C DATT++ECLHTFC+ CI + +I CP+CN +
Sbjct: 11 IKLKIRELNQHIVCILCAGYYIDATTVTECLHTFCKSCIVKYLQTSKI--CPMCNQKVHE 68
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
P+ LRPD T+QDV K+ P
Sbjct: 69 TQPVLNLRPDRTMQDVVLKLVP 90
>gi|410914467|ref|XP_003970709.1| PREDICTED: polycomb group RING finger protein 1-like [Takifugu
rubripes]
Length = 261
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
VK+K + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 32 VKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 89
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 90 TQPLLNLKLDRVMQDIVYKLVP 111
>gi|91094599|ref|XP_966675.1| PREDICTED: similar to posterior sex combs protein [Tribolium
castaneum]
Length = 798
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIEC-CPVCNIDLG- 72
K+K I + +TC +C L DATTISECLH+FCR CI I + C CPVC + +
Sbjct: 9 KIKLVEINSYLTCYLCKGYLIDATTISECLHSFCRSCI---IKFLQKNCYCPVCEVIINK 65
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
P KL D TLQD+ K+ P
Sbjct: 66 AKPCLKL--DKTLQDIVYKLVP 85
>gi|344283744|ref|XP_003413631.1| PREDICTED: polycomb group RING finger protein 1-like [Loxodonta
africana]
Length = 447
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 1 MRVEREMAS--------NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI 52
MR++ ++ S N V+VK + + + C +C DATTI+ECLHTFC+ CI
Sbjct: 201 MRLQNQLQSVYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI 260
Query: 53 YDKISDEEIECCPVCNIDLG-CVPLEKLRPDHTLQDVRAKIFP 94
+ + CP+CNI + PL L+ D +QD+ K+ P
Sbjct: 261 VKYLQTSKY--CPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 301
>gi|427781769|gb|JAA56336.1| Putative polycomb group ring finger protein 3 [Rhipicephalus
pulchellus]
Length = 238
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 3 VEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE 62
+ +E S + +++ +T+ + C IC L DATT++ECLHTFC+ C+ + D
Sbjct: 4 IPQESLSRQMERRIRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLEDNNT- 62
Query: 63 CCPVCNIDLG-CVPLEKLRPDHTLQDVRAKIFP 94
CP C I + PL+ + D T+QD+ K+ P
Sbjct: 63 -CPTCEIVIHQSYPLQYISYDRTMQDIVYKLVP 94
>gi|156372680|ref|XP_001629164.1| predicted protein [Nematostella vectensis]
gi|156216158|gb|EDO37101.1| predicted protein [Nematostella vectensis]
Length = 241
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GCVPLEKLRPDH 83
+TC +CN L DATTI ECLHTFCR CI + + CP CN+ L P+ + D
Sbjct: 15 ITCKLCNGYLIDATTIIECLHTFCRSCIVKYLHENNH--CPTCNVFLHHSHPMNYISADR 72
Query: 84 TLQDVRAKIFP 94
T+Q++ K+ P
Sbjct: 73 TMQEIVFKLVP 83
>gi|270016418|gb|EFA12864.1| hypothetical protein TcasGA2_TC004246 [Tribolium castaneum]
Length = 838
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIEC-CPVCNIDLG- 72
K+K I + +TC +C L DATTISECLH+FCR CI I + C CPVC + +
Sbjct: 9 KIKLVEINSYLTCYLCKGYLIDATTISECLHSFCRSCI---IKFLQKNCYCPVCEVIINK 65
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
P KL D TLQD+ K+ P
Sbjct: 66 AKPCLKL--DKTLQDIVYKLVP 85
>gi|410917430|ref|XP_003972189.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2-like [Takifugu rubripes]
Length = 362
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TCP+C L DATTI ECLH+FC+ CI + E + CP C++ + P +R D
Sbjct: 39 LTCPLCAGYLIDATTIVECLHSFCKTCIVAFL--ETNKFCPRCDVQVHKTCPQLSIRADK 96
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 97 TLQDIVYKLVPGLFKDEMKRRR 118
>gi|405957197|gb|EKC23426.1| Polycomb complex protein BMI-1, partial [Crassostrea gigas]
Length = 855
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-----PLEKL 79
+TC +C L DATTI ECLH+FCR CI + CPVC C+ P + L
Sbjct: 21 LTCVLCGGYLIDATTIIECLHSFCRTCIVHYLHTSNY--CPVCE----CLVHKKHPHQNL 74
Query: 80 RPDHTLQDVRAKIFP 94
R D TLQDV K+ P
Sbjct: 75 RSDKTLQDVVYKLVP 89
>gi|198426367|ref|XP_002131146.1| PREDICTED: similar to ring finger protein isoform 1 [Ciona
intestinalis]
Length = 243
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN-IDLGC 73
K++ + +TC +C+ L DATTI+ECLHTFC+ CI + D E CP C +
Sbjct: 21 KIRLRNLNEHITCYLCHGYLIDATTITECLHTFCKSCIVSHVEDGRNE-CPKCEAVIHHS 79
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ L D T+QD+ K+ P
Sbjct: 80 YPLQYLAYDRTMQDIVEKLVP 100
>gi|432951654|ref|XP_004084869.1| PREDICTED: polycomb group RING finger protein 1-like [Oryzias
latipes]
Length = 260
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
VK+K + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 32 VKLKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 89
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 90 TQPLLNLKLDRVMQDIVYKLVP 111
>gi|327274703|ref|XP_003222116.1| PREDICTED: polycomb complex protein BMI-1-like [Anolis
carolinensis]
Length = 473
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 166 LMCVICGGYFIDATTIIECLHSFCKTCIVHYL--ETSKYCPICDVQVHKTRPLLNIRSDK 223
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 224 TLQDIVYKLVPGLFKNEMKRRR 245
>gi|340375861|ref|XP_003386452.1| PREDICTED: polycomb group RING finger protein 1-like [Amphimedon
queenslandica]
Length = 238
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C L DATTI ECLHTFC+ CI + + CPVCN + PL +RPD
Sbjct: 9 ITCSLCAGYLIDATTIIECLHTFCKTCIVKYL--QNCNSCPVCNTVVHETQPLLNIRPDR 66
Query: 84 TLQDVRAKIFP 94
T+QD+ K+ P
Sbjct: 67 TMQDIVYKLVP 77
>gi|348512208|ref|XP_003443635.1| PREDICTED: polycomb complex protein BMI-1-like [Oreochromis
niloticus]
Length = 567
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 235 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETSKYCPICDVQVHKT 292
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 293 KPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 324
>gi|301097065|ref|XP_002897628.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106846|gb|EEY64898.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 249
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
MA + + VK + + C +C+ +LRDA TI +CLH+FC+ CIY + CP
Sbjct: 1 MALDARTMTVKLAELTEHLGCVLCHGILRDAHTIPDCLHSFCKSCIYRHFLVKGSCICPK 60
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
CN L P+ L D LQ V +IFP
Sbjct: 61 CNKVLSPRPIATLITDQKLQAVVDRIFP 88
>gi|225717392|gb|ACO14542.1| Polycomb group RING finger protein 1 [Esox lucius]
Length = 262
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
VK+K + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 32 VKLKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 89
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 90 TQPLLNLKLDRVMQDIVYKLVP 111
>gi|443693122|gb|ELT94558.1| hypothetical protein CAPTEDRAFT_225467 [Capitella teleta]
Length = 340
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
++++ + + C +CN +ATTI+ECLHTFC+ C+ + D + CP C I +
Sbjct: 151 IQIQATDLNSLFVCTLCNGYFYNATTITECLHTFCKSCLVKHV-DRSLH-CPKCKILIHP 208
Query: 74 V-PLEKLRPDHTLQDVRAKIFP 94
P +R D T+QD+ +IFP
Sbjct: 209 TDPFVHMRHDSTIQDIMFRIFP 230
>gi|354474513|ref|XP_003499475.1| PREDICTED: polycomb complex protein BMI-1-like [Cricetulus griseus]
Length = 523
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A + ++K + + C +C DATTI ECLH+FC+ CI + E + CP+C
Sbjct: 198 AEMHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPIC 255
Query: 68 NIDLGCV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
++ + PL +R D TLQD+ K+ P +KRR+
Sbjct: 256 DVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 294
>gi|223590125|sp|Q8R023.2|PCGF1_MOUSE RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1; AltName:
Full=RING finger protein 68
gi|148666640|gb|EDK99056.1| mCG133598, isoform CRA_a [Mus musculus]
gi|149036498|gb|EDL91116.1| rCG56268, isoform CRA_a [Rattus norvegicus]
Length = 259
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|149727250|ref|XP_001500243.1| PREDICTED: polycomb group RING finger protein 1 [Equus caballus]
Length = 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|431920375|gb|ELK18407.1| Polycomb group RING finger protein 1 [Pteropus alecto]
Length = 272
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 47 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 104
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 105 TQPLLNLKLDRVMQDIVYKLVP 126
>gi|395841172|ref|XP_003793420.1| PREDICTED: polycomb group RING finger protein 1 [Otolemur
garnettii]
Length = 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|348511743|ref|XP_003443403.1| PREDICTED: polycomb group RING finger protein 1-like [Oreochromis
niloticus]
Length = 261
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
VK+K + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 32 VKLKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 89
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 90 TQPLLNLKLDRVMQDIVYKLVP 111
>gi|321459285|gb|EFX70340.1| hypothetical protein DAPPUDRAFT_202413 [Daphnia pulex]
Length = 347
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 22 RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + AKI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDMLIAKIYP-SRDEYEAHQERVLANLSKSHSQSALL 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAA 149
+ + ++ +Q TR R NA + A
Sbjct: 138 NSIEEGMKIQSQNRATRIRKNAPENETA 165
>gi|403362268|gb|EJY80857.1| Ring domain protein [Oxytricha trifallax]
Length = 803
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIEC-CPVCNIDLGCVPLEKLRPDH 83
+TC +C + RDA TI+EC+ T+C+ C++ SD CP C +LG PLE + D
Sbjct: 551 LTCWLCKGVYRDAHTINECMCTYCKGCVFKYYSDNPTRYKCPQCQSELGGKPLETVVKDQ 610
Query: 84 TLQDVRAKIFP-LKRR 98
LQ++ + P K+R
Sbjct: 611 VLQNIVDSLIPDFKQR 626
>gi|296223494|ref|XP_002757636.1| PREDICTED: polycomb group RING finger protein 1 [Callithrix
jacchus]
gi|403260331|ref|XP_003922629.1| PREDICTED: polycomb group RING finger protein 1 [Saimiri
boliviensis boliviensis]
Length = 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|73980955|ref|XP_532995.2| PREDICTED: polycomb group RING finger protein 1 [Canis lupus
familiaris]
gi|301772196|ref|XP_002921515.1| PREDICTED: polycomb group RING finger protein 1-like [Ailuropoda
melanoleuca]
gi|410955103|ref|XP_003984198.1| PREDICTED: polycomb group RING finger protein 1 [Felis catus]
gi|281343057|gb|EFB18641.1| hypothetical protein PANDA_010410 [Ailuropoda melanoleuca]
Length = 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|410908881|ref|XP_003967919.1| PREDICTED: polycomb complex protein BMI-1-like [Takifugu rubripes]
Length = 529
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 220 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETSKYCPICDVQVHKTKPLLNIRSDK 277
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 278 TLQDIVYKLVPGLFKNEMKRRR 299
>gi|297667281|ref|XP_002811904.1| PREDICTED: polycomb group RING finger protein 1 [Pongo abelii]
gi|332239108|ref|XP_003268747.1| PREDICTED: polycomb group RING finger protein 1 [Nomascus
leucogenys]
gi|402891319|ref|XP_003908897.1| PREDICTED: polycomb group RING finger protein 1 [Papio anubis]
gi|355565816|gb|EHH22245.1| hypothetical protein EGK_05474 [Macaca mulatta]
gi|355751439|gb|EHH55694.1| hypothetical protein EGM_04947, partial [Macaca fascicularis]
gi|380783643|gb|AFE63697.1| polycomb group RING finger protein 1 [Macaca mulatta]
gi|383411057|gb|AFH28742.1| polycomb group RING finger protein 1 [Macaca mulatta]
gi|384942650|gb|AFI34930.1| polycomb group RING finger protein 1 [Macaca mulatta]
Length = 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|291386486|ref|XP_002709762.1| PREDICTED: polycomb group ring finger 1 [Oryctolagus cuniculus]
gi|351698792|gb|EHB01711.1| Polycomb group RING finger protein 1 [Heterocephalus glaber]
Length = 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|348566463|ref|XP_003469021.1| PREDICTED: polycomb group RING finger protein 1-like [Cavia
porcellus]
Length = 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|335310264|ref|XP_003361952.1| PREDICTED: polycomb group RING finger protein 1-like [Sus scrofa]
Length = 262
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 69 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 126
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 127 TQPLLNLKLDRVMQDIVYKLVP 148
>gi|321455673|gb|EFX66800.1| hypothetical protein DAPPUDRAFT_218894 [Daphnia pulex]
Length = 225
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
K+K ++ + + C IC L DATT++ECLHTFC+ C+ + EE CP CNI +
Sbjct: 4 KIKLRSLNSHIICKICGGYLIDATTVTECLHTFCKSCLVKHL--EENNTCPSCNIMIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|426223979|ref|XP_004006151.1| PREDICTED: polycomb group RING finger protein 1 [Ovis aries]
gi|440896445|gb|ELR48364.1| Polycomb group RING finger protein 1 [Bos grunniens mutus]
Length = 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|442749917|gb|JAA67118.1| Putative polycomb group ring finger protein 3 [Ixodes ricinus]
Length = 228
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
+++ +T+ + C IC L DATT++ECLHTFC+ C+ + D CP C I +
Sbjct: 4 RIRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLEDNNT--CPTCEIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 YPLQYISYDRTMQDIVYKLVP 82
>gi|198426369|ref|XP_002131159.1| PREDICTED: similar to ring finger protein isoform 2 [Ciona
intestinalis]
Length = 226
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN-IDLGC 73
K++ + +TC +C+ L DATTI+ECLHTFC+ CI + D E CP C +
Sbjct: 4 KIRLRNLNEHITCYLCHGYLIDATTITECLHTFCKSCIVSHVEDGRNE-CPKCEAVIHHS 62
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ L D T+QD+ K+ P
Sbjct: 63 YPLQYLAYDRTMQDIVEKLVP 83
>gi|109240538|ref|NP_116062.2| polycomb group RING finger protein 1 [Homo sapiens]
gi|114578279|ref|XP_515562.2| PREDICTED: polycomb group RING finger protein 1 [Pan troglodytes]
gi|397478066|ref|XP_003810379.1| PREDICTED: polycomb group RING finger protein 1 [Pan paniscus]
gi|426336056|ref|XP_004029520.1| PREDICTED: polycomb group RING finger protein 1 [Gorilla gorilla
gorilla]
gi|223590124|sp|Q9BSM1.2|PCGF1_HUMAN RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1; AltName:
Full=RING finger protein 68
gi|119620038|gb|EAW99632.1| polycomb group ring finger 1, isoform CRA_a [Homo sapiens]
gi|410217414|gb|JAA05926.1| polycomb group ring finger 1 [Pan troglodytes]
gi|410254064|gb|JAA14999.1| polycomb group ring finger 1 [Pan troglodytes]
gi|410290162|gb|JAA23681.1| polycomb group ring finger 1 [Pan troglodytes]
Length = 259
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|47224771|emb|CAG00365.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 19/119 (15%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDHTL 85
C +C L DA+TI+ECLHTFC+ CI CP C+I + PL +RPD L
Sbjct: 12 CGLCCGFLIDASTITECLHTFCKSCIVKHFFYSNR--CPTCSIVVHETQPLYNIRPDRQL 69
Query: 86 QDVRAKIFPL-------------KRRKVKAPEAV---PSVTLPVRRKERSLSSLVVSAP 128
QD+ K+ P K R ++ P V PS+ + ++K+ +LS V + P
Sbjct: 70 QDIVYKMIPFLEELEREQMRSFYKSRGLEVPNPVISSPSLVVSKKQKKEALSQSVFTIP 128
>gi|47223969|emb|CAG06146.1| unnamed protein product [Tetraodon nigroviridis]
Length = 347
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TCP+C L DATTI ECLH+FC+ CI + + CP C++ + P +R D
Sbjct: 15 LTCPLCAGYLIDATTIVECLHSFCKTCIVAFLETNKF--CPRCDVQVHKTCPQLSIRADK 72
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 73 TLQDIVYKLVPGLFKDEMKRRR 94
>gi|226479844|emb|CAX73218.1| Polycomb group RING finger protein 3 [Schistosoma japonicum]
Length = 246
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C L DA +I+ECLH+FC+ CI K S+E+ E CPVC I + PL + D
Sbjct: 20 ITCKLCKGYLIDAVSITECLHSFCKSCIV-KYSEEKRE-CPVCGILIHQSHPLNYMSFDR 77
Query: 84 TLQDVRAKIFP 94
TLQD+ KI P
Sbjct: 78 TLQDIVYKIVP 88
>gi|148666641|gb|EDK99057.1| mCG133598, isoform CRA_b [Mus musculus]
Length = 252
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
RV RE V+VK + + + C +C DATTI+ECLHTFC+ CI + +
Sbjct: 22 RVRRE-------VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY 74
Query: 62 ECCPVCNIDLG-CVPLEKLRPDHTLQDVRAKIFP 94
CP+CNI + PL L+ D +QD+ K+ P
Sbjct: 75 --CPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 106
>gi|344249173|gb|EGW05277.1| Polycomb group RING finger protein 2 [Cricetulus griseus]
Length = 398
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 35 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 92
Query: 75 -PLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
PL +R D TLQD+ K+ P + + +P V +T P+ + L A R+
Sbjct: 93 RPLLSIRSDKTLQDIVYKLVPGLFKGIPSPCVV-LLTSPISQL------LPAHACRLPLD 145
Query: 134 TTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNE 173
RR AA GSN + ++E+ ++ D+E
Sbjct: 146 EMKRRRDFYAAYPLTEVPNGSNEDRGEVLEQEKGALGDDE 185
>gi|195012111|ref|XP_001983480.1| GH15918 [Drosophila grimshawi]
gi|193896962|gb|EDV95828.1| GH15918 [Drosophila grimshawi]
Length = 222
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN-IDLGC 73
+VK +TI +TC IC DATT++ECLHTFC+ C+ + EE + CP C+ I
Sbjct: 4 RVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHL--EEKKTCPTCDSIIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|56753730|gb|AAW25062.1| SJCHGC01341 protein [Schistosoma japonicum]
Length = 246
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C L DA +I+ECLH+FC+ CI K S+E+ E CPVC I + PL + D
Sbjct: 20 ITCKLCKGYLIDAVSITECLHSFCKSCIV-KYSEEKRE-CPVCGILIHQSHPLNYMSFDR 77
Query: 84 TLQDVRAKIFP 94
TLQD+ KI P
Sbjct: 78 TLQDIVYKIVP 88
>gi|444731073|gb|ELW71439.1| Polycomb complex protein BMI-1 [Tupaia chinensis]
Length = 383
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 96 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 153
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 154 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 185
>gi|170068277|ref|XP_001868804.1| polycomb group RING finger protein 3 [Culex quinquefasciatus]
gi|167864343|gb|EDS27726.1| polycomb group RING finger protein 3 [Culex quinquefasciatus]
Length = 223
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
++K +T+ +TC IC+ DATT++ECLHTFC+ C+ + EE CP C N+
Sbjct: 4 RIKLKTLNKHITCEICSGYFIDATTVTECLHTFCKSCLVKHL--EENNTCPTCENVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|37574111|ref|NP_932109.1| polycomb group RING finger protein 1 [Mus musculus]
gi|20307063|gb|AAH28560.1| Polycomb group ring finger 1 [Mus musculus]
Length = 247
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 79
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 80 TQPLLNLKLDRVMQDIVYKLVP 101
>gi|432880346|ref|XP_004073652.1| PREDICTED: polycomb group RING finger protein 3-like [Oryzias
latipes]
Length = 249
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L K+ I A +TC +C L DATT++ECLHTFCR C+ + EE CP C I +
Sbjct: 10 LTRKINLCHINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVI 67
Query: 72 G-CVPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 68 HQSHPLQYIGHDRTMQDIVYKLVP 91
>gi|426240771|ref|XP_004014267.1| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Ovis
aries]
Length = 469
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|395539960|ref|XP_003771930.1| PREDICTED: uncharacterized protein LOC100928474 [Sarcophilus
harrisii]
Length = 802
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 480 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 537
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 538 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 571
>gi|442749919|gb|JAA67119.1| Putative polycomb group ring finger protein 3 [Ixodes ricinus]
Length = 226
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
+++ +T+ + C IC L DATT++ECLHTFC+ C+ + D CP C I +
Sbjct: 4 RIRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLEDNNT--CPTCEIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 YPLQYISYDRTMQDIVYKLVP 82
>gi|242000102|ref|XP_002434694.1| Locus-specific chromosome binding protein, putative [Ixodes
scapularis]
gi|215498024|gb|EEC07518.1| Locus-specific chromosome binding protein, putative [Ixodes
scapularis]
Length = 225
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
+++ +T+ + C IC L DATT++ECLHTFC+ C+ + D CP C I +
Sbjct: 4 RIRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLEDNNT--CPTCEIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 YPLQYISYDRTMQDIVYKLVP 82
>gi|354498153|ref|XP_003511180.1| PREDICTED: polycomb group RING finger protein 1-like [Cricetulus
griseus]
Length = 247
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 79
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 80 TQPLLNLKLDRVMQDIVYKLVP 101
>gi|224009894|ref|XP_002293905.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970577|gb|EED88914.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 355
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C RD T+++CLH+FCR C+ + + CP C+I L P ++ D T
Sbjct: 110 LICSLCKGYFRDPYTVADCLHSFCRSCLIAQFTVGRHR-CPTCDISLEPDPFREVLADRT 168
Query: 85 LQDVRAKIFPLKRRK 99
LQ+V K+FP + K
Sbjct: 169 LQEVVEKVFPWMQTK 183
>gi|403278207|ref|XP_003945245.1| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
[Saimiri boliviensis boliviensis]
Length = 469
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|387017720|gb|AFJ50978.1| Polycomb complex protein BMI-1-like [Crotalus adamanteus]
Length = 327
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCVICGGYFIDATTIIECLHSFCKTCIVHYL--ESSKYCPICDVQVHKTRPLLNIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKNEMKRRR 95
>gi|344277626|ref|XP_003410601.1| PREDICTED: COMM domain-containing protein 3-like isoform 1
[Loxodonta africana]
Length = 469
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 159 LMCVLCGGYFIDATTIIECLHSFCKTCIVHYL--ETSKYCPICDVQVHKTRPLLNIRSDK 216
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 217 TLQDIVYKLVPGLFKNEMKRRR 238
>gi|126332008|ref|XP_001365616.1| PREDICTED: polycomb group RING finger protein 1-like [Monodelphis
domestica]
Length = 259
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 92 TQPLLNLKLDRVMQDIVYKLVP 113
>gi|296482751|tpg|DAA24866.1| TPA: polycomb group RING finger protein 1 [Bos taurus]
Length = 247
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 79
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 80 TQPLLNLKLDRVMQDIVYKLVP 101
>gi|13436326|gb|AAH04952.1| PCGF1 protein [Homo sapiens]
gi|312150760|gb|ADQ31892.1| polycomb group ring finger 1 [synthetic construct]
Length = 247
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 79
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 80 TQPLLNLKLDRVMQDIVYKLVP 101
>gi|348556239|ref|XP_003463930.1| PREDICTED: polycomb complex protein BMI-1-like [Cavia porcellus]
Length = 469
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|321455745|gb|EFX66870.1| hypothetical protein DAPPUDRAFT_302409 [Daphnia pulex]
Length = 919
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V K++ + +TC +C +ATTI ECLH+FC+ CI + E + CPVC + +
Sbjct: 4 VSKLQITKLNPHLTCLLCGGYYIEATTIIECLHSFCKSCIVRYL--ETNKFCPVCEVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP 94
PL +R D TLQD+ K+ P
Sbjct: 62 KTKPLLNIRSDQTLQDIVYKLVP 84
>gi|432108051|gb|ELK33032.1| Polycomb group RING finger protein 1 [Myotis davidii]
Length = 266
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 79
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 80 TQPLLNLKLDRVMQDIVYKLVP 101
>gi|395827235|ref|XP_003786810.1| PREDICTED: polycomb complex protein BMI-1 [Otolemur garnettii]
Length = 469
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|291228049|ref|XP_002733998.1| PREDICTED: lethal (3) 73Ah-like [Saccoglossus kowalevskii]
Length = 321
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CV 74
VK I +TC +C L DATTI+ECLHTFC+ CI + + CP C++ +
Sbjct: 59 VKLIDINQYITCQLCGGYLVDATTITECLHTFCKSCIVKYLETSIL--CPTCDVKIHETW 116
Query: 75 PLEKLRPDHTLQDVRAKIFP 94
P +R D T+QD+ K+ P
Sbjct: 117 PYYSIRLDRTMQDIVHKLLP 136
>gi|402879774|ref|XP_003903504.1| PREDICTED: polycomb complex protein BMI-1 [Papio anubis]
Length = 469
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|148676158|gb|EDL08105.1| mCG9550, isoform CRA_b [Mus musculus]
Length = 334
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A + ++K + + C +C DATTI ECLH+FC+ CI + E + CP+C
Sbjct: 9 AEMHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPIC 66
Query: 68 NIDLGCV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
++ + PL +R D TLQD+ K+ P +KRR+
Sbjct: 67 DVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 105
>gi|157114429|ref|XP_001652267.1| ring finger protein [Aedes aegypti]
gi|108877311|gb|EAT41536.1| AAEL006839-PB [Aedes aegypti]
Length = 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
++K +T+ +TC IC DATT++ECLHTFC+ C+ + EE CP C N+
Sbjct: 4 RIKLKTLNKHITCEICKGYFIDATTVTECLHTFCKSCLVKHL--EENNTCPTCQNVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|317419829|emb|CBN81865.1| Polycomb complex protein BMI-1-A [Dicentrarchus labrax]
Length = 333
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETSKYCPICDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 KPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|291228047|ref|XP_002733991.1| PREDICTED: lethal (3) 73Ah-like [Saccoglossus kowalevskii]
Length = 220
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKL 79
+ A +TC IC+ DATTI+ECLHTFC+ CI + EE CP C I + PL +
Sbjct: 10 VNAHITCRICHGYFIDATTITECLHTFCKSCIVRYL--EEHNTCPTCGIVIHQSHPLHYI 67
Query: 80 RPDHTLQDVRAKIFP 94
D T+QD+ K+ P
Sbjct: 68 GHDRTMQDIVYKLVP 82
>gi|441625691|ref|XP_003257751.2| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
isoform 2 [Nomascus leucogenys]
Length = 469
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|323276616|ref|NP_001190991.1| COMMD3-BMI1 read-through protein [Homo sapiens]
Length = 469
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|291402220|ref|XP_002717444.1| PREDICTED: BMI1 polycomb ring finger oncogene [Oryctolagus
cuniculus]
Length = 469
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|194227110|ref|XP_001496144.2| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Equus
caballus]
Length = 469
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|62858263|ref|NP_001015995.1| BMI1 polycomb ring finger oncogene [Xenopus (Silurana)
tropicalis]
gi|163916023|gb|AAI57201.1| hypothetical protein LOC548749 [Xenopus (Silurana) tropicalis]
Length = 325
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRADKTLQDIVYKLVPGLFKGEMKRRR 95
>gi|55741429|ref|NP_001007001.1| polycomb group RING finger protein 1 [Rattus norvegicus]
gi|81891476|sp|Q6DLV9.1|PCGF1_RAT RecName: Full=Polycomb group RING finger protein 1; AltName:
Full=Nervous system Polycomb-1; Short=NSPc1
gi|50345835|gb|AAT74859.1| Nspc1-like protein [Rattus norvegicus]
Length = 243
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 79
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 80 TQPLLNLKLDRVMQDIVYKLVP 101
>gi|157114431|ref|XP_001652268.1| ring finger protein [Aedes aegypti]
gi|108877312|gb|EAT41537.1| AAEL006839-PA [Aedes aegypti]
Length = 194
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
++K +T+ +TC IC DATT++ECLHTFC+ C+ + EE CP C N+
Sbjct: 4 RIKLKTLNKHITCEICKGYFIDATTVTECLHTFCKSCLVKHL--EENNTCPTCQNVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|58383116|ref|XP_312405.2| AGAP002533-PA [Anopheles gambiae str. PEST]
gi|55242232|gb|EAA07500.2| AGAP002533-PA [Anopheles gambiae str. PEST]
Length = 222
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 16/109 (14%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
++K +T+ +TC IC DATT++ECLHTFC+ C+ + EE CP C N+
Sbjct: 4 RIKLKTLNEHITCEICRGYFIDATTVTECLHTFCKSCLVKHL--EENNTCPTCENVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP-------------LKRRKVKAPEAVPSV 109
PL+ + D T+QD+ K+ P K R + P+ +P V
Sbjct: 62 HPLQYISFDRTMQDIVYKLVPNLMDNEMQREREFYKSRNLPCPKDMPQV 110
>gi|391336808|ref|XP_003742770.1| PREDICTED: polycomb group RING finger protein 3-like [Metaseiulus
occidentalis]
Length = 250
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
K+K +T+ +TC IC L DATT++ECLHTFC+ C+ + EE CP C +
Sbjct: 4 KIKLKTLNVHITCRICKGYLIDATTVTECLHTFCKSCLVKHL--EEKNTCPQCETLIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL + D T+QDV ++ P
Sbjct: 62 HPLNYVAYDRTMQDVVYRLVP 82
>gi|56119143|ref|NP_001007989.1| polycomb complex protein BMI-1 [Gallus gallus]
gi|82196525|sp|Q5SDR3.1|BMI1_CHICK RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|52078091|gb|AAU25821.1| BMI1 [Gallus gallus]
Length = 326
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|397501528|ref|XP_003821435.1| PREDICTED: polycomb complex protein BMI-1 [Pan paniscus]
Length = 469
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|54695768|gb|AAV38256.1| B lymphoma Mo-MLV insertion region (mouse) [synthetic construct]
gi|61366456|gb|AAX42862.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|417409780|gb|JAA51381.1| Putative locus-specific chromosome binding protein, partial
[Desmodus rotundus]
Length = 332
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A + ++K + + C +C DATTI ECLH+FC+ CI + E + CP+C
Sbjct: 5 AEMHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPIC 62
Query: 68 NIDLGCV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
++ + PL +R D TLQD+ K+ P +KRR+
Sbjct: 63 DVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 101
>gi|350589578|ref|XP_003130828.2| PREDICTED: polycomb complex protein BMI-1-like [Sus scrofa]
Length = 469
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 149 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 206
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 207 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 238
>gi|344249026|gb|EGW05130.1| Polycomb complex protein BMI-1 [Cricetulus griseus]
Length = 324
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|73948737|ref|XP_858578.1| PREDICTED: polycomb complex protein BMI-1 isoform 3 [Canis lupus
familiaris]
gi|301754703|ref|XP_002913196.1| PREDICTED: polycomb complex protein BMI-1-like [Ailuropoda
melanoleuca]
gi|281350791|gb|EFB26375.1| hypothetical protein PANDA_000973 [Ailuropoda melanoleuca]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|54695770|gb|AAV38257.1| B lymphoma Mo-MLV insertion region (mouse) [Homo sapiens]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|332862823|ref|XP_001147119.2| PREDICTED: polycomb complex protein BMI-1 isoform 2, partial [Pan
troglodytes]
Length = 332
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A + ++K + + C +C DATTI ECLH+FC+ CI + E + CP+C
Sbjct: 5 AEMHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPIC 62
Query: 68 NIDLGCV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
++ + PL +R D TLQD+ K+ P +KRR+
Sbjct: 63 DVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 101
>gi|157819305|ref|NP_001100838.1| BMI1 polycomb ring finger oncogene [Rattus norvegicus]
gi|149021165|gb|EDL78772.1| polycomb group ring finger 4 (predicted) [Rattus norvegicus]
gi|195540247|gb|AAI68209.1| Bmi1 protein [Rattus norvegicus]
Length = 324
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|291873|gb|AAA19873.1| putative [Homo sapiens]
gi|371929009|gb|AEX59150.1| polycomb ring finger protein [Sus scrofa]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|351709698|gb|EHB12617.1| Polycomb complex protein BMI-1 [Heterocephalus glaber]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|27883842|ref|NP_005171.4| polycomb complex protein BMI-1 [Homo sapiens]
gi|197098134|ref|NP_001126098.1| polycomb complex protein BMI-1 [Pongo abelii]
gi|114692354|ref|XP_001136082.1| PREDICTED: polycomb complex protein BMI-1 isoform 2 [Pan
troglodytes]
gi|426364177|ref|XP_004049196.1| PREDICTED: polycomb complex protein BMI-1 [Gorilla gorilla
gorilla]
gi|22258801|sp|P35226.2|BMI1_HUMAN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4; AltName:
Full=RING finger protein 51
gi|75061773|sp|Q5R8L2.1|BMI1_PONAB RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|15341688|gb|AAH11652.1| BMI1 polycomb ring finger oncogene [Homo sapiens]
gi|55730352|emb|CAH91898.1| hypothetical protein [Pongo abelii]
gi|60814344|gb|AAX36297.1| B lymphoma Mo-MLV insertion region [synthetic construct]
gi|119606554|gb|EAW86148.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606556|gb|EAW86150.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606557|gb|EAW86151.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606560|gb|EAW86154.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|189053794|dbj|BAG36046.1| unnamed protein product [Homo sapiens]
gi|208965886|dbj|BAG72957.1| BMI1 polycomb ring finger oncogene [synthetic construct]
gi|355782688|gb|EHH64609.1| Polycomb group RING finger protein 4 [Macaca fascicularis]
gi|431917704|gb|ELK16969.1| Polycomb complex protein BMI-1 [Pteropus alecto]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|84000133|ref|NP_001033161.1| polycomb complex protein BMI-1 [Bos taurus]
gi|122138672|sp|Q32KX7.1|BMI1_BOVIN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|81674800|gb|AAI09872.1| BMI1 polycomb ring finger oncogene [Bos taurus]
gi|296481449|tpg|DAA23564.1| TPA: polycomb complex protein BMI-1 [Bos taurus]
gi|440901143|gb|ELR52137.1| Polycomb complex protein BMI-1 [Bos grunniens mutus]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|432108191|gb|ELK33111.1| Polycomb complex protein BMI-1 [Myotis davidii]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|60654235|gb|AAX29810.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|48145939|emb|CAG33192.1| COMMD3 [Homo sapiens]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|346472247|gb|AEO35968.1| hypothetical protein [Amblyomma maculatum]
Length = 263
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 3 VEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE 62
+ +E S + +++ +T+ + C IC L DATT++ECLHTFC+ C+ + D
Sbjct: 4 IPQESLSRQMERRIRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLEDNNT- 62
Query: 63 CCPVCNIDLG-CVPLEKLRPDHTLQDVRAKIFP 94
CP C I + PL+ + D T+QD+ K+ P
Sbjct: 63 -CPTCEIVIHQSYPLQYISYDRTMQDIVYKLVP 94
>gi|443728543|gb|ELU14843.1| hypothetical protein CAPTEDRAFT_207553 [Capitella teleta]
Length = 100
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GC 73
KVK + + C +C DATTI+ECLHTFC+ CI + + CPVC++ +
Sbjct: 6 KVKLTELNPHLICVLCGGYYVDATTITECLHTFCKTCIVRYLDSSKY--CPVCDVMVHKT 63
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL +R DH LQ + K+ P
Sbjct: 64 KPLLHIRSDHLLQALVYKMVP 84
>gi|46559391|ref|NP_031578.2| polycomb complex protein BMI-1 [Mus musculus]
gi|115066|sp|P25916.1|BMI1_MOUSE RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|192201|gb|AAA37299.1| zinc finger protein [Mus musculus]
gi|192203|gb|AAA37300.1| bmi-1 [Mus musculus]
gi|31565373|gb|AAH53708.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|38614119|gb|AAH56384.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|84872481|gb|ABC67286.1| PCGF4 [Mus musculus]
gi|148676156|gb|EDL08103.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676157|gb|EDL08104.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676159|gb|EDL08106.1| mCG9550, isoform CRA_a [Mus musculus]
Length = 324
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|68163489|ref|NP_001020133.1| polycomb complex protein BMI-1 [Felis catus]
gi|22256724|sp|Q9TST0.1|BMI1_FELCA RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|6012977|emb|CAB57313.1| Bmi-1 protein [Felis catus]
Length = 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|156552700|ref|XP_001599688.1| PREDICTED: polycomb group RING finger protein 3-like [Nasonia
vitripennis]
Length = 224
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
K+K + + + +TC IC L DATT++ECLHTFC+ C+ + +E CP C I +
Sbjct: 4 KIKLKALNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHL--DEKNTCPQCQIVIHQS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>gi|358255849|dbj|GAA57479.1| polycomb group RING finger protein 4 [Clonorchis sinensis]
Length = 112
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL- 71
V ++ I +TC +CN L DATTI ECLH+FCR CI + CP+C+ L
Sbjct: 4 VTRIPVVVINPMLTCKLCNGYLIDATTIVECLHSFCRSCILSYLKLHTT--CPICDTLLH 61
Query: 72 GCVPLEKLRPDHTLQDVRAKIFP 94
P +RPD LQ + K+ P
Sbjct: 62 KTRPHYAIRPDRALQAMVYKLIP 84
>gi|355709604|gb|AES03647.1| polycomb group ring finger 1 [Mustela putorius furo]
Length = 95
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 3 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 60
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 61 TQPLLNLKLDRVMQDIVYKLVP 82
>gi|109158140|pdb|2H0D|A Chain A, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 97
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GC 73
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 2 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 59
Query: 74 VPLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 60 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 91
>gi|432929897|ref|XP_004081281.1| PREDICTED: polycomb complex protein BMI-1-like [Oryzias latipes]
Length = 584
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 268 LICVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETSKYCPICDVQVHKTKPLLNIRSDK 325
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 326 TLQDIVYKLVPGLFKNEMKRRR 347
>gi|334348830|ref|XP_001367832.2| PREDICTED: polycomb complex protein BMI-1-like [Monodelphis
domestica]
Length = 589
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 14/110 (12%)
Query: 2 RVEREMASNNLV-----VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKI 56
++ R + S N ++K + + C +C DATTI ECLH+FC+ CI +
Sbjct: 251 QLGRRLGSGNATKMHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL 310
Query: 57 SDEEIECCPVCNIDLGCV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
E + CP+C++ + PL +R D TLQD+ K+ P +KRR+
Sbjct: 311 --ETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 358
>gi|327275580|ref|XP_003222551.1| PREDICTED: polycomb group RING finger protein 2-like [Anolis
carolinensis]
Length = 337
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|33150610|gb|AAP97183.1|AF087884_1 RNF3A-2 [Homo sapiens]
Length = 238
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 13 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 70
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 71 TQPLLNLKLDRVMQDIVYKLVP 92
>gi|148232784|ref|NP_001082838.1| polycomb group RING finger protein 6 [Danio rerio]
gi|141796360|gb|AAI39555.1| Si:ch211-67n3.7 protein [Danio rerio]
Length = 277
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 21/121 (17%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDHTL 85
C +CN DATTI+ECLHTFC+ CI CP C+I + PL +RPD L
Sbjct: 60 CALCNGFFIDATTITECLHTFCKSCIVKHFFYSNR--CPNCSIVVHQTQPLYCIRPDRQL 117
Query: 86 QDVRAKIFP---------------LKRRKVKAPEAVPS---VTLPVRRKERSLSSLVVSA 127
QD+ K+ P L+ +V P A P+ V LP R+K+ + V +
Sbjct: 118 QDIVFKMVPYLEEDERSRICAFYRLRGLEVPKPVASPAAYPVKLPQRQKKDLVPQSVFTI 177
Query: 128 P 128
P
Sbjct: 178 P 178
>gi|156388938|ref|XP_001634749.1| predicted protein [Nematostella vectensis]
gi|156221836|gb|EDO42686.1| predicted protein [Nematostella vectensis]
Length = 99
Score = 62.4 bits (150), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN-IDLG 72
++VK + C +CN L + TI+EC+HTFC+ C+ IS + CPVCN +
Sbjct: 1 LRVKVTDLNPHFICKLCNGYLINPVTITECIHTFCKSCLLRHIS--LVNRCPVCNEVIHE 58
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
P+ +R D T+QD+ KIFP
Sbjct: 59 TTPIYNIRVDRTMQDIINKIFP 80
>gi|395826556|ref|XP_003786483.1| PREDICTED: polycomb group RING finger protein 2 [Otolemur
garnettii]
Length = 344
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|256084336|ref|XP_002578386.1| RING finger protein [Schistosoma mansoni]
Length = 246
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C L DA +I+ECLH FC+ CI K S+E+ E CPVC I + PL + D
Sbjct: 20 ITCKLCKGYLIDAVSITECLHPFCKSCIV-KYSEEKRE-CPVCGILIHQSHPLNYMSFDR 77
Query: 84 TLQDVRAKIFPLKRRK 99
TLQD+ KI P ++K
Sbjct: 78 TLQDIVYKIVPDLKQK 93
>gi|426348519|ref|XP_004041881.1| PREDICTED: polycomb group RING finger protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|426348521|ref|XP_004041882.1| PREDICTED: polycomb group RING finger protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 344
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|355562340|gb|EHH18934.1| Polycomb group RING finger protein 4 [Macaca mulatta]
Length = 290
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|149412168|ref|XP_001511592.1| PREDICTED: polycomb complex protein BMI-1-like [Ornithorhynchus
anatinus]
Length = 326
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|114667779|ref|XP_511440.2| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
troglodytes]
gi|397477039|ref|XP_003809893.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Pan
paniscus]
gi|397477041|ref|XP_003809894.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
paniscus]
gi|410051474|ref|XP_003953100.1| PREDICTED: polycomb group RING finger protein 2 [Pan troglodytes]
gi|410210824|gb|JAA02631.1| polycomb group ring finger 2 [Pan troglodytes]
gi|410293958|gb|JAA25579.1| polycomb group ring finger 2 [Pan troglodytes]
Length = 344
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|343962543|dbj|BAK62859.1| polycomb group RING finger protein 4 [Pan troglodytes]
Length = 326
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVRVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|291190390|ref|NP_001167252.1| polycomb complex protein BMI-1-A [Salmo salar]
gi|223648886|gb|ACN11201.1| Polycomb complex protein BMI-1-A [Salmo salar]
Length = 334
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 18 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETSKYCPICDVPVHKTKPLLNIRSDK 75
Query: 84 TLQDVRAKIFP------LKRRKVKAPEAVPSVTLPVRRKE 117
TLQD+ K+ P +KRR+ A PSV R E
Sbjct: 76 TLQDIVYKLVPGLFKNEMKRRR-DFYAAHPSVDATTRSNE 114
>gi|355754087|gb|EHH58052.1| DNA-binding protein Mel-18 [Macaca fascicularis]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|444713977|gb|ELW54865.1| Polycomb group RING finger protein 2 [Tupaia chinensis]
Length = 318
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 23 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 80
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 81 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 112
>gi|402899970|ref|XP_003912956.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Papio
anubis]
gi|402899972|ref|XP_003912957.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Papio
anubis]
gi|402899974|ref|XP_003912958.1| PREDICTED: polycomb group RING finger protein 2 isoform 3 [Papio
anubis]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|388454613|ref|NP_001252868.1| polycomb group RING finger protein 2 [Macaca mulatta]
gi|387542154|gb|AFJ71704.1| polycomb group RING finger protein 2 [Macaca mulatta]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|326432942|gb|EGD78512.1| hypothetical protein PTSG_09210 [Salpingoeca sp. ATCC 50818]
Length = 569
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++ E + + C +C+ L DATT+SECLHTFC+ CI + E CPVC
Sbjct: 323 TMRYNLERLNPYLMCRLCDGYLIDATTLSECLHTFCKSCIVNFF--ESNNSCPVCGTLAH 380
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP 94
+ P + LR D T+Q + K+ P
Sbjct: 381 EINPHDTLRQDRTMQTIVYKLVP 403
>gi|6005964|ref|NP_009075.1| polycomb group RING finger protein 2 [Homo sapiens]
gi|462585|sp|P35227.1|PCGF2_HUMAN RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=RING
finger protein 110; AltName: Full=Zinc finger protein
144
gi|285933|dbj|BAA03074.1| Mel-18 protein [Homo sapiens]
gi|13436062|gb|AAH04858.1| Polycomb group ring finger 2 [Homo sapiens]
gi|18999362|gb|AAH24255.1| Polycomb group ring finger 2 [Homo sapiens]
gi|119580932|gb|EAW60528.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
gi|119580933|gb|EAW60529.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|30584759|gb|AAP36632.1| Homo sapiens zinc finger protein 144 (Mel-18) [synthetic
construct]
gi|60652807|gb|AAX29098.1| ring finger protein 110 [synthetic construct]
Length = 345
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|355568454|gb|EHH24735.1| DNA-binding protein Mel-18 [Macaca mulatta]
Length = 341
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKTRPLLSIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKDEMKRRR 95
>gi|344285955|ref|XP_003414725.1| PREDICTED: polycomb group RING finger protein 2 [Loxodonta
africana]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|74211363|dbj|BAE26436.1| unnamed protein product [Mus musculus]
Length = 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVH 61
Query: 73 -CVPLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KNRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|395749268|ref|XP_003778916.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger
protein 2 [Pongo abelii]
Length = 385
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKTRPLLSIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKDEMKRRR 95
>gi|117644306|emb|CAL37647.1| hypothetical protein [synthetic construct]
gi|208967072|dbj|BAG73550.1| polycomb group ring finger 2 [synthetic construct]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|47223482|emb|CAF97969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 300
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETNKYCPICDVQVHKTKPLLNIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKNEMKRRR 95
>gi|149723900|ref|XP_001501632.1| PREDICTED: polycomb group RING finger protein 2 [Equus caballus]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|348562307|ref|XP_003466952.1| PREDICTED: polycomb group RING finger protein 2-like [Cavia
porcellus]
Length = 344
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|403279413|ref|XP_003931245.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 31 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 88
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 89 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 122
>gi|417410052|gb|JAA51507.1| Putative polycomb group ring finger protein 2, partial [Desmodus
rotundus]
Length = 359
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 20 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 77
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 78 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 109
>gi|363746044|ref|XP_003643507.1| PREDICTED: polycomb group RING finger protein 1-like, partial
[Gallus gallus]
Length = 249
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
VKVK + + + C +C DATTI+ECLHTFC+ CI + + CP+CN +
Sbjct: 23 VKVKMKELNEHIVCCLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPMCNTKIHE 80
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 81 TQPLLNLKLDRVMQDIVYKLVP 102
>gi|124001541|ref|NP_001074220.1| polycomb complex protein BMI-1-B [Danio rerio]
gi|82208348|sp|Q7T3E6.1|BMI1B_DANRE RecName: Full=Polycomb complex protein BMI-1-B; AltName:
Full=Polycomb group RING finger protein 4-B
gi|31419435|gb|AAH53151.1| B lymphoma Mo-MLV insertion region 1b [Danio rerio]
Length = 324
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCVLCGGYFIDATTIVECLHSFCKMCIVRYL--ETSKYCPICDVQVHKTKPLLNIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKNEMKRRR 95
>gi|35902786|ref|NP_919347.1| polycomb complex protein BMI-1-A [Danio rerio]
gi|21668469|dbj|BAC01266.1| psc1 [Danio rerio]
Length = 322
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 18 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETSKYCPICDVQVHKTKPLLNIRSDK 75
Query: 84 TLQDVRAKIFP------LKRRKVKAPEAVPSV 109
TLQD+ K+ P +KRR+ E PSV
Sbjct: 76 TLQDIVYKLVPGLFKNEMKRRRDFYAEH-PSV 106
>gi|260786248|ref|XP_002588170.1| hypothetical protein BRAFLDRAFT_118878 [Branchiostoma floridae]
gi|229273329|gb|EEN44181.1| hypothetical protein BRAFLDRAFT_118878 [Branchiostoma floridae]
Length = 256
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
KV+ + + C +C L DATTI+ECLH FC C+ + CP CN+ +
Sbjct: 19 KVRLIDLNPYIVCRLCGGYLIDATTITECLHPFCHSCLLKHLDFSNR--CPTCNVIIHET 76
Query: 75 -PLEKLRPDHTLQDVRAKIFP 94
PL +RPD TLQD+ K+ P
Sbjct: 77 NPLYNIRPDRTLQDIIYKLLP 97
>gi|393009465|gb|AFN02447.1| posterior sex combs [Bombyx mori]
Length = 1096
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 6 EMASNNLVVKVKRETIAAC---MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE 62
+M ++N+ V +R + +TCP+C DATTI ECLH+FCR CI + +
Sbjct: 14 KMDNSNVAVVPQRTLLGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLKAKSY- 72
Query: 63 CCPVCNIDLGCV-PLEKLRPDHTLQDVRAKIFP 94
CPVC + + P KL D LQD+ K+ P
Sbjct: 73 -CPVCEMMINSAKPNIKL--DKALQDIVYKLVP 102
>gi|441660761|ref|XP_004093035.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger
protein 2 [Nomascus leucogenys]
Length = 286
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKTRPLLSIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKDEMKRRR 95
>gi|158563842|sp|Q8JIR0.2|BMI1A_DANRE RecName: Full=Polycomb complex protein BMI-1-A; AltName:
Full=Polycomb group RING finger protein 4-A
gi|29436448|gb|AAH49423.1| Bmi1 protein [Danio rerio]
Length = 320
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETSKYCPICDVQVHKTKPLLNIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRKVKAPEAVPSV 109
TLQD+ K+ P +KRR+ E PSV
Sbjct: 74 TLQDIVYKLVPGLFKNEMKRRRDFYAEH-PSV 104
>gi|296202674|ref|XP_002748549.1| PREDICTED: polycomb group RING finger protein 2 [Callithrix
jacchus]
Length = 344
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|403279411|ref|XP_003931244.1| PREDICTED: polycomb group RING finger protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 344
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|343781183|pdb|3RPG|B Chain B, Bmi1RING1B-Ubch5c Complex Structure
Length = 117
Score = 61.6 bits (148), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GC 73
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 74 VPLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|390346383|ref|XP_787592.3| PREDICTED: polycomb group RING finger protein 3-like
[Strongylocentrotus purpuratus]
Length = 309
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C L DATTI+ECLHTFC+ C+ + EE CP C I + PL + D
Sbjct: 45 ITCKLCRGYLIDATTITECLHTFCKSCLVKYL--EENNTCPTCRILIHQSHPLTYVGFDR 102
Query: 84 TLQDVRAKIFP 94
T+QD+ K+ P
Sbjct: 103 TMQDIVYKLVP 113
>gi|388374|gb|AAB27059.1| flvi-2/bmi-1 [Homo sapiens]
Length = 289
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 5 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKTRPLLNIRSDK 62
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 63 TLQDIVYKLVPGLFKNEMKRRR 84
>gi|426237855|ref|XP_004012873.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger
protein 2 [Ovis aries]
Length = 324
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|221136916|ref|NP_001137578.1| polycomb group RING finger protein 2 [Bos taurus]
gi|296476466|tpg|DAA18581.1| TPA: polycomb group ring finger 2 [Bos taurus]
Length = 344
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|156372730|ref|XP_001629189.1| predicted protein [Nematostella vectensis]
gi|156216183|gb|EDO37126.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + C +C +ATT++ECLHTFC+ CI + +CCP CN+ +
Sbjct: 1 VQVKIRDVNPHIVCSLCAGYFVEATTVTECLHTFCKSCIVKYLQSS--KCCPTCNLQIHE 58
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D T+QDV K+ P
Sbjct: 59 TQPLLNLQLDRTMQDVVHKVVP 80
>gi|449283268|gb|EMC89948.1| Polycomb group RING finger protein 1, partial [Columba livia]
Length = 230
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
VKVK + + + C +C DATTI+ECLHTFC+ CI + + CP+CN +
Sbjct: 4 VKVKMKELNEHIVCCLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPMCNTKIHE 61
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL L+ D +QD+ K+ P
Sbjct: 62 TQPLLNLKLDRVMQDIVYKLVP 83
>gi|354474807|ref|XP_003499621.1| PREDICTED: polycomb group RING finger protein 2-like [Cricetulus
griseus]
Length = 342
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|307208978|gb|EFN86178.1| Polycomb group protein Psc [Harpegnathos saltator]
Length = 1598
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CP+C L DATT+ ECLH+FCR CI +S + CP C L ++ D
Sbjct: 17 LICPLCRGYLIDATTVVECLHSFCRSCILKHLS--KSAHCPSCKHALNKA-KPNIKADKA 73
Query: 85 LQDVRAKIFP-------LKRRKV--KAPEAVPSVTLPVRRKERSLSSLVVSAP 128
LQD+ K+ P KRR+ K PE S T P +R E +S ++ AP
Sbjct: 74 LQDIVYKLVPGLYHKEMRKRREFYKKHPEHADSAT-PEQRGE-DVSGRLIFAP 124
>gi|196009498|ref|XP_002114614.1| hypothetical protein TRIADDRAFT_28240 [Trichoplax adhaerens]
gi|190582676|gb|EDV22748.1| hypothetical protein TRIADDRAFT_28240 [Trichoplax adhaerens]
Length = 232
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 24 CMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGCVPLEKLRPD 82
C+TC +C+ L +ATT+ ECLHTFC+ CI + D CP C N+ PL+ + D
Sbjct: 13 CLTCSLCDGYLVNATTVVECLHTFCKSCIVKHLEDSNN--CPKCDNVVHQSHPLQYISYD 70
Query: 83 HTLQDVRAKIFP-LKRRKVKA 102
T+QD+ K+ P L+ R+++
Sbjct: 71 RTMQDLVYKLVPGLQERELET 91
>gi|126308194|ref|XP_001366744.1| PREDICTED: polycomb group RING finger protein 2 [Monodelphis
domestica]
Length = 347
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|390340056|ref|XP_780401.3| PREDICTED: polycomb group RING finger protein 6-like
[Strongylocentrotus purpuratus]
Length = 214
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 5 REMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECC 64
R + + + ++ + +TC +C L DATT++ECLHTFC+ C+ I E+ C
Sbjct: 4 RILRGQQVPIYIRLTEVNQYITCHLCGGYLIDATTLTECLHTFCKSCLIMYIKKNEL--C 61
Query: 65 PVCNIDLG-CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEA 105
P C++ + P+ L+ D T+Q++ K+ P + KA E
Sbjct: 62 PTCDVLIHPSNPVLSLKLDRTIQEIVYKLLPYIQEDEKAREV 103
>gi|157128545|ref|XP_001661478.1| posterior sex combs protein [Aedes aegypti]
gi|108872543|gb|EAT36768.1| AAEL011178-PA [Aedes aegypti]
Length = 1348
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
KV ++ +TC +C L DATTI ECLH+FC CI + E+ CP C + +
Sbjct: 40 KVLLSSVNPYITCNLCKGYLIDATTIVECLHSFCHSCIMKHLRTEQY--CPQCEMMINKA 97
Query: 75 PLEKLRPDHTLQDVRAKIFP 94
++PD TLQ + K+ P
Sbjct: 98 -KPNIKPDATLQSIVYKLVP 116
>gi|82217516|sp|Q91648.1|BMI1A_XENLA RecName: Full=Polycomb complex protein BMI-1-A; AltName:
Full=Polycomb group RING finger protein 4-A
gi|1086577|gb|AAC59729.1| xbmi-1 [Xenopus laevis]
Length = 326
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKTRPLLNIRADK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKGEMKRRR 95
>gi|148226666|ref|NP_001081790.1| polycomb complex protein BMI-1-A [Xenopus laevis]
gi|49115061|gb|AAH72892.1| Xbmi-1 protein [Xenopus laevis]
Length = 326
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKTRPLLNIRADK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKGEMKRRR 95
>gi|170059595|ref|XP_001865431.1| posterior sex combs protein [Culex quinquefasciatus]
gi|167878320|gb|EDS41703.1| posterior sex combs protein [Culex quinquefasciatus]
Length = 1324
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
K+ ++ +TC +C L DATTI ECLH+FC CI + E+ CP C + +
Sbjct: 39 KIHLSSVNPYITCNLCKGYLIDATTIVECLHSFCHSCIMKHLRTEQY--CPQCEMMINKA 96
Query: 75 PLEKLRPDHTLQDVRAKIFP 94
++PD TLQ + K+ P
Sbjct: 97 -KPNIKPDATLQAIVYKLVP 115
>gi|359320397|ref|XP_548155.4| PREDICTED: polycomb group RING finger protein 2 [Canis lupus
familiaris]
Length = 376
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 38 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 95
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 96 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 127
>gi|156551978|ref|XP_001602634.1| PREDICTED: hypothetical protein LOC100118736 [Nasonia vitripennis]
Length = 1304
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CP+C L DATT+ ECLH+FCR CI ++ CP C L ++ D
Sbjct: 17 LICPLCRGYLIDATTVVECLHSFCRSCILKHLNKN--AQCPTCKHLLNTA-KPNIKADKA 73
Query: 85 LQDVRAKIFP-------LKRRKV--KAPEAVPSVTLPVRRKERSLSSLVVSAP 128
LQD+ K+ P KRR+ K PE S T P +R E +S ++ AP
Sbjct: 74 LQDIVYKLVPGLYHKEMRKRREFYSKHPEHADSAT-PEQRGE-DVSGRLIFAP 124
>gi|297845754|ref|XP_002890758.1| hypothetical protein ARALYDRAFT_313512 [Arabidopsis lyrata subsp.
lyrata]
gi|297336600|gb|EFH67017.1| hypothetical protein ARALYDRAFT_313512 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 327 RRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEI 386
R + +WF L AS+ Q LPQ++ SYLRIKD I V + KYLM KLDL SESEV I
Sbjct: 237 RPHSGLWFLLQASQFQEKEPFLPQVNKSYLRIKDGRITVRLLIKYLMKKLDLDSESEVNI 296
>gi|109157341|pdb|2CKL|A Chain A, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 108
Score = 61.2 bits (147), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GC 73
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 74 VPLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|395532615|ref|XP_003768365.1| PREDICTED: polycomb group RING finger protein 2 [Sarcophilus
harrisii]
Length = 289
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 30 LMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKTRPLLSIRSDK 87
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 88 TLQDIVYKLVPGLFKDEMKRRR 109
>gi|355709609|gb|AES03649.1| Polycomb group RING finger protein 2 [Mustela putorius furo]
Length = 344
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 5 TRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHK 62
Query: 74 V-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 63 TRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|440904221|gb|ELR54760.1| Polycomb group RING finger protein 2 [Bos grunniens mutus]
Length = 353
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|410980897|ref|XP_003996810.1| PREDICTED: polycomb group RING finger protein 2 [Felis catus]
Length = 361
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 21 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 78
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 79 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 112
>gi|321450351|gb|EFX62403.1| hypothetical protein DAPPUDRAFT_8025 [Daphnia pulex]
Length = 86
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL- 71
V K++ + +TC +C +ATTI ECLH+FC+ CI + E + CPVC + +
Sbjct: 4 VSKLQITKLNPHLTCLLCGGYYIEATTIIECLHSFCKSCIVRYL--ETNKFCPVCEVQVH 61
Query: 72 GCVPLEKLRPDHTLQDVRAKIFP 94
PL +R D TLQD+ K+ P
Sbjct: 62 KTKPLLNIRSDQTLQDIVYKLVP 84
>gi|119580931|gb|EAW60527.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
gi|119580934|gb|EAW60530.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
Length = 257
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKTRPLLSIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKDEMKRRR 95
>gi|157786680|ref|NP_001099306.1| polycomb group RING finger protein 2 [Rattus norvegicus]
gi|149054053|gb|EDM05870.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054054|gb|EDM05871.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054055|gb|EDM05872.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054056|gb|EDM05873.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|187469317|gb|AAI67059.1| Pcgf2 protein [Rattus norvegicus]
Length = 342
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|198427593|ref|XP_002130931.1| PREDICTED: similar to ring finger protein 2 [Ciona intestinalis]
Length = 372
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ ++N + V ++ + + CPIC +LR+ T ECLH FC +CI +
Sbjct: 25 RTPQEVITDNTEIAVSPRSLHSELMCPICLDMLRNTMTTKECLHRFCSECITTALRSGNK 84
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + AKI+P
Sbjct: 85 E-CPTCRKKL--VSRRSLRPDPNFDALIAKIYP 114
>gi|410924147|ref|XP_003975543.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Takifugu
rubripes]
Length = 342
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ ++ A T + R + + + A
Sbjct: 142 HSIEEGLKIQAMTRLQRGKRHTVENGSGA 170
>gi|6678635|ref|NP_033571.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028181|ref|NP_001156779.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028183|ref|NP_001156780.1| polycomb group RING finger protein 2 [Mus musculus]
gi|126937|sp|P23798.2|PCGF2_MOUSE RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=Melanoma
nuclear protein 18; AltName: Full=RING finger protein
110; AltName: Full=Zinc finger protein 144;
Short=Zfp-144
gi|220477|dbj|BAA14122.1| Mel-18 [Mus musculus]
gi|16741134|gb|AAH16419.1| Pcgf2 protein [Mus musculus]
gi|19548758|gb|AAL90776.1| mel-18 protein [Mus musculus]
gi|19548760|gb|AAL90777.1| mel-18 protein [Mus musculus]
gi|148684140|gb|EDL16087.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684141|gb|EDL16088.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684142|gb|EDL16089.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684143|gb|EDL16090.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
Length = 342
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 4 TTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVH 61
Query: 73 CV-PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|156391205|ref|XP_001635659.1| predicted protein [Nematostella vectensis]
gi|156222755|gb|EDO43596.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GCVPLEKLRPDH 83
+ C +C L DATTI ECLH+FCR CI + D CPVC+ ++ PL +R D+
Sbjct: 14 IICVLCGGYLVDATTIIECLHSFCRGCIV-RYLDTSYR-CPVCDAEIHKTRPLLNIRADN 71
Query: 84 TLQDVRAKIFP 94
LQD+ K+ P
Sbjct: 72 VLQDIVYKVVP 82
>gi|346716206|ref|NP_001039912.2| polycomb group RING finger protein 1 [Bos taurus]
gi|223590123|sp|Q2YDF9.2|PCGF1_BOVIN RecName: Full=Polycomb group RING finger protein 1
Length = 259
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 91
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL + D +QD+ K+ P
Sbjct: 92 TQPLLNHKLDRVMQDIVYKLVP 113
>gi|156391209|ref|XP_001635661.1| predicted protein [Nematostella vectensis]
gi|156391213|ref|XP_001635663.1| predicted protein [Nematostella vectensis]
gi|156222757|gb|EDO43598.1| predicted protein [Nematostella vectensis]
gi|156222759|gb|EDO43600.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GCVPLEKLRPDH 83
+ C +C L DATTI ECLH+FCR CI + E CPVC+ ++ PL +R D+
Sbjct: 14 IICVLCGGYLVDATTIIECLHSFCRCCIVRYL--ETSYRCPVCDAEIHKTRPLLNIRADN 71
Query: 84 TLQDVRAKIFP 94
LQD+ K+ P
Sbjct: 72 VLQDIVYKVVP 82
>gi|348543967|ref|XP_003459453.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oreochromis
niloticus]
Length = 342
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ ++ A T + R + + + A
Sbjct: 142 HSIEEGLKIQAMTRLQRGKRHTVENGSGA 170
>gi|291405919|ref|XP_002719174.1| PREDICTED: ring finger protein 110 [Oryctolagus cuniculus]
Length = 314
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKTRPLLSIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKDEMKRRR 95
>gi|432911762|ref|XP_004078710.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oryzias latipes]
Length = 342
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ ++ A T + R + + + A
Sbjct: 142 HSIEEGLKIQAMTRLQRGKRHTVENGSGA 170
>gi|328721666|ref|XP_001943283.2| PREDICTED: hypothetical protein LOC100162794 [Acyrthosiphon pisum]
Length = 1082
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
+VK + + C +C L DAT+I ECLH+FCR CI + CP+C D+
Sbjct: 28 RVKLTDVNRQLICVLCLGYLVDATSIVECLHSFCRSCIVLHLDKNNF--CPICREDIQNS 85
Query: 75 PLEKLRPDHTLQDVRAKIFP------LKRRK 99
+ L+PD LQD+ K+ P +KRR+
Sbjct: 86 KV--LKPDKALQDIVYKLVPGLYHSEMKRRQ 114
>gi|328721663|ref|XP_001942972.2| PREDICTED: hypothetical protein LOC100162132 [Acyrthosiphon pisum]
Length = 985
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C D TTI ECLH+FCR CI + E CP+C++ L PL +R D
Sbjct: 16 LVCVLCAGYYIDPTTIVECLHSFCRSCIVKYL--ETSRFCPICDVQLHKTRPLLSIRRDK 73
Query: 84 TLQDVRAKIFPLKRRKVKAPEAVPSVTL 111
L+ + KI P K A A+P+V L
Sbjct: 74 ILERLVYKIVPGLHAKEMARRALPNVEL 101
>gi|449445780|ref|XP_004140650.1| PREDICTED: uncharacterized protein LOC101204945 [Cucumis sativus]
Length = 334
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 327 RRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEI 386
R + IWFSL E +G P+ SSYLRIKD + V + KYLM KL L +E E+E+
Sbjct: 215 RPHSGIWFSLQPLELNQGKQPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEM 274
Query: 387 KCMGQPVIPTLQLYNLVD-LWLQTASTSDRVPAMIGSSAKDFVMVLTYA 434
+C G+ + L + ++ D +W S + + SS D +MVL YA
Sbjct: 275 RCRGEKLEGCLTMQHIRDKIWCSKDSALTTL--LPNSSTIDHIMVLHYA 321
>gi|431890708|gb|ELK01587.1| Polycomb group RING finger protein 2 [Pteropus alecto]
Length = 144
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GC 73
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 74 VPLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRR 95
>gi|148225863|ref|NP_001088007.1| polycomb complex protein BMI-1-B [Xenopus laevis]
gi|82198007|sp|Q640D5.1|BMI1B_XENLA RecName: Full=Polycomb complex protein BMI-1-B; AltName:
Full=Polycomb group RING finger protein 4-B
gi|52138943|gb|AAH82694.1| LOC494698 protein [Xenopus laevis]
Length = 323
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DA TI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDAATIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 64 RPLLNIRADKTLQDIVYKLVPGLFKGEMKRRR 95
>gi|82571652|gb|AAI10243.1| PCGF1 protein [Bos taurus]
Length = 247
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
V+VK + + + C +C DATTI+ECLHTFC+ CI + + CP+CNI +
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNIKIHE 79
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
PL + D +QD+ K+ P
Sbjct: 80 TQPLLNHKLDRVMQDIVYKLVP 101
>gi|256087612|ref|XP_002579960.1| polycomb complex protein bmi-1 [Schistosoma mansoni]
gi|353229282|emb|CCD75453.1| putative polycomb complex protein bmi-1 [Schistosoma mansoni]
Length = 353
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 20/115 (17%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIECCPVCNIDLGCV-PLEKLRP 81
+TC +C L DATTI ECLH+FCR CI Y K++ CPVC L P +RP
Sbjct: 16 LTCNLCRGYLIDATTIVECLHSFCRSCILTYLKLNTT----CPVCATLLHKTKPHCAIRP 71
Query: 82 DHTLQDVRAKIFP-------LKRRKVKAPEAVPSVTL----PVRRKERSLSSLVV 125
D LQ + K+ P L RRK EA PS P +R + +L++ V+
Sbjct: 72 DRALQSIVYKLIPNLFEKEMLCRRKFY--EAHPSCYTRSLSPEKRGDLTLNTYVL 124
>gi|432901995|ref|XP_004076982.1| PREDICTED: polycomb group RING finger protein 6-like [Oryzias
latipes]
Length = 256
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDHTL 85
C +C L DATTI+ECLHTFC+ CI CP C I + PL +RPD L
Sbjct: 39 CGLCCGFLIDATTITECLHTFCKSCIVRHFFHSNR--CPTCTIVVHQTQPLYNIRPDRQL 96
Query: 86 QDVRAKIFPL 95
QD+ K+ P
Sbjct: 97 QDIVYKMVPF 106
>gi|289741557|gb|ADD19526.1| putative E3 ubiquitin ligase [Glossina morsitans morsitans]
Length = 415
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ ++N + V ++ + + CPIC +L+ T ECLH FC+ CI +
Sbjct: 21 RKPQEIITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCQDCIITALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++L
Sbjct: 81 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SREEYEAIQEKVMAKFNQTQSQQALV 136
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGAS 177
+ + ++ +Q R R+ A + S++ + DN D +
Sbjct: 137 NSINEGIKLQSQNRPLRFRTKGAGGRGGNHNSSHIHNVSNESNTNGNESDNRDSGA 192
>gi|47215614|emb|CAG11645.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 28 RTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 87
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 88 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 143
Query: 122 SLVVSAPRVSAQTTMTRRRSN 142
+ ++ A T++ R +++
Sbjct: 144 HSIEEGLKIQAMTSIKRTKTS 164
>gi|443709431|gb|ELU04103.1| hypothetical protein CAPTEDRAFT_149212 [Capitella teleta]
Length = 235
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN-IDLGC 73
KV+ +TI +TC +C L +ATTI+ECLHTFC+ CI + EE CP C +
Sbjct: 11 KVRLKTINPHITCSLCKGYLVEATTITECLHTFCKTCIVKYL--EEHTSCPKCGELIHQS 68
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL + D T+QD+ K+ P
Sbjct: 69 HPLNYISHDRTMQDIVFKLVP 89
>gi|192205|gb|AAA37301.1| zinc finger protein [Mus musculus]
Length = 249
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DATTI ECLH+FC+ CI + E + CP+C++ + PL +R D
Sbjct: 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKTRPLLNIRSDK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQD+ K+ P +KRR+
Sbjct: 74 TLQDIVYKLVPGLFKNEMKRRR 95
>gi|348536470|ref|XP_003455719.1| PREDICTED: hypothetical protein LOC100707220 [Oreochromis
niloticus]
Length = 491
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC +C L TT++ECLHTFC+ CI EE CP C I + PLE LR D+
Sbjct: 262 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHF--EESNDCPKCGIQVHETNPLEMLRLDN 319
Query: 84 TLQDVRAKIFPLKR 97
TL+++ K+ P R
Sbjct: 320 TLEEIIFKLVPGLR 333
>gi|443685943|gb|ELT89389.1| hypothetical protein CAPTEDRAFT_219532 [Capitella teleta]
Length = 337
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 142/359 (39%), Gaps = 52/359 (14%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V ++ + + CPIC +L++ T ECLH FC++CI +
Sbjct: 20 RTPQEALTDNTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQECIITALRSGNK 79
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLK--------RRKVKAPEAVPSVTLPV 113
E CP C L V LRPD + +KI+P + R K + + L
Sbjct: 80 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYPSRDEYDAQQERVLAKLKQTINPNALTQ 136
Query: 114 RRKERSLSSLVVSAPRVSA-QTTMTRRRSNAAARKAAALRGSNLSTD--KPPKKEEDSVE 170
+E + A RVS ++ T + A + GS+ TD P ++ S E
Sbjct: 137 SIEEGLRQQALNRAQRVSVKKSGTTNEGGDVKDEDAISHTGSDTHTDDLGPKQQRAPSEE 196
Query: 171 DNEDGASSPETLNKLSQNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKSDLWKPLNFLV 230
N G + + +S+ ++P++P + ND E L+KP +
Sbjct: 197 SNSLGEGTSD-------------ASTGSKPARP--KQNTQNDIEL------LFKPHPDME 235
Query: 231 EVASRTRSLKSNSLGSEAKAEPTTITDNEAQVHKTKNKEDKCKSKSGNKNNNPDPTTSET 290
+ S+TR +K++ A A + A +N+ N+ D S +
Sbjct: 236 QDVSQTRYIKTS-----ANATVNHLGKYLAMRLALENQ----------LNSGEDSGESAS 280
Query: 291 INPKRLRRIRRKTAAAFGDSNISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLP 349
+ P+ R TA F S + LD +Y + N P+ + + S P P
Sbjct: 281 LKPEAYRIYVSTTAGQF--SMMDGNESLDHIHERYLKANKPLELFYMPEKSADSSAPKP 337
>gi|348529700|ref|XP_003452351.1| PREDICTED: polycomb group RING finger protein 6-like [Oreochromis
niloticus]
Length = 256
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDHTL 85
C +C L DATTI+ECLHTFC+ CI CP C+I + PL +RPD L
Sbjct: 39 CALCCGFLIDATTITECLHTFCKSCIVKHFFYSNK--CPTCSIIVHQTQPLYNIRPDRQL 96
Query: 86 QDVRAKIFPL 95
QD+ K+ P
Sbjct: 97 QDIVYKMVPF 106
>gi|350644706|emb|CCD60584.1| RING finger protein, putative [Schistosoma mansoni]
Length = 122
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C L DA +I+ECLH FC+ CI K S+E+ E CPVC I + PL + D
Sbjct: 20 ITCKLCKGYLIDAVSITECLHPFCKSCIV-KYSEEKRE-CPVCGILIHQSHPLNYMSFDR 77
Query: 84 TLQDVRAKIFPLKRRK 99
TLQD+ KI P ++K
Sbjct: 78 TLQDIVYKIVPDLKQK 93
>gi|383857691|ref|XP_003704337.1| PREDICTED: uncharacterized protein LOC100877658 [Megachile
rotundata]
Length = 1539
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CP+C L DATT+ ECLH+FCR CI ++ E CP C L ++ D
Sbjct: 17 LICPLCRGYLIDATTVVECLHSFCRSCILKHLNTE--AHCPSCKHVLNKA-KPNIKADKA 73
Query: 85 LQDVRAKIFP-------LKRRKV--KAPEAVPSVTLPVRRKERSLSSLVVSAP 128
LQD+ K+ P KRR+ K PE + P +R E +S ++ AP
Sbjct: 74 LQDIVYKLVPGLYHKEMRKRREFYKKHPEHA-DLATPEQRGE-DVSGRLIFAP 124
>gi|148675578|gb|EDL07525.1| mCG120273 [Mus musculus]
Length = 290
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ESSKYCPICDVQVHKT 63
Query: 75 -PLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R + TLQD+ K+ P +KRR+
Sbjct: 64 RPLLNIRSNKTLQDIVYKLVPGLFKNEMKRRR 95
>gi|229366298|gb|ACQ58129.1| E3 ubiquitin-protein ligase RING2 [Anoplopoma fimbria]
Length = 344
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 5 REMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECC 64
+E ++ L + V ++ + + CPIC +L++ T ECLH FC CI + E C
Sbjct: 31 QEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKE-C 89
Query: 65 PVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLV 124
P C L V LRPD + +KI+P R + +A + + +++LS +
Sbjct: 90 PTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALSHSI 146
Query: 125 VSAPRVSAQTTMTRRRSNAAARKAAA 150
++ A T + R + + + A
Sbjct: 147 EEGLKIQAMTRLQRGKRHTVENGSGA 172
>gi|260809325|ref|XP_002599456.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
gi|229284735|gb|EEN55468.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
Length = 280
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC DATTI ECLH+FC+ CI + + CPVC++ + PL +R D
Sbjct: 16 LMCVICGGYFIDATTIIECLHSFCKTCIVKYLDTSKY--CPVCDVQVHKTRPLLNIRADK 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQ + K+ P +KRR+
Sbjct: 74 TLQSLVYKLVPNLFKDEMKRRR 95
>gi|358334498|dbj|GAA52966.1| polycomb group RING finger protein 2, partial [Clonorchis
sinensis]
Length = 119
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGCV 74
VK T+ + C +C L DAT ++EC+H FCR CI +++ ++ CP+C ++
Sbjct: 8 VKLSTLNGHLICGLCGGYLIDATVLTECVHVFCRSCIVKYLTEHKV--CPLCQSLIQETR 65
Query: 75 PLEKLRPDHTLQDVRAKIFP 94
P LRPD LQ V K+ P
Sbjct: 66 PGHALRPDTVLQRVVYKLVP 85
>gi|351706754|gb|EHB09673.1| Polycomb group RING finger protein 2 [Heterocephalus glaber]
Length = 452
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNID-LGC 73
++K + + C +C DATTI ECLH+FC+ CI + E + CP+C++ L C
Sbjct: 132 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVPVLAC 189
Query: 74 VPLEKLRPDHTLQDVRAKIFP------LKRRK 99
E D TLQD+ K+ P +KRR+
Sbjct: 190 GLGESRGSDKTLQDIVYKLVPGLFKDEMKRRR 221
>gi|147906248|ref|NP_001084738.1| uncharacterized protein LOC414708 [Xenopus laevis]
gi|46329615|gb|AAH68930.1| MGC83173 protein [Xenopus laevis]
Length = 317
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+++K + + C +C DA TI ECLH+FC+ CI + E + CP+C+ +
Sbjct: 4 TMRIKMTELNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYL--EAHKFCPMCDSQVH 61
Query: 73 -CVPLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KGRPLLSIRSDKTLQDIVYKLVPGLFRGEMKRRR 95
>gi|226495675|ref|NP_001145086.1| uncharacterized protein LOC100278296 [Zea mays]
gi|195650923|gb|ACG44929.1| hypothetical protein [Zea mays]
Length = 348
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 19/122 (15%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLP-----SESEVEI 386
+W +L A+ +Q LPQI+ SYLRIKD N+ V + KYL KL + S +VE+
Sbjct: 219 MWLTLQAAPNQSREPVLPQIAKSYLRIKDSNMKVEVVMKYLAEKLGVARSRSRSHQQVEL 278
Query: 387 KCMGQPVIPTLQLYNLVD-LWLQTASTS-------DRVPA------MIGSSAKDFVMVLT 432
C GQ + P L + + + +W TA+ + + PA S+A D VM L
Sbjct: 279 TCRGQVLPPLLLVRDAWETIWCSTAAAAAQREGVEEETPADHLTARRRSSAATDHVMTLC 338
Query: 433 YA 434
Y+
Sbjct: 339 YS 340
>gi|443685109|gb|ELT88825.1| hypothetical protein CAPTEDRAFT_107755, partial [Capitella
teleta]
Length = 142
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+ C +C DATTI+ECLHTFC+ CI + +CCP C + P L+PD
Sbjct: 14 IVCSLCAGYYIDATTITECLHTFCKSCIVKYLQCN--KCCPQCTTKIHETQPFLNLKPDR 71
Query: 84 TLQDVRAKIFP 94
LQD+ K+ P
Sbjct: 72 VLQDIVYKLVP 82
>gi|225718860|gb|ACO15276.1| Polycomb group RING finger protein 3 [Caligus clemensi]
Length = 230
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
+++ I +TC IC L DATT++ECLHTFC+ CI + D CP C +
Sbjct: 7 RIELRDINEMITCKICQGYLIDATTVTECLHTFCKSCIVKHLEDSNT--CPECEDTIHQS 64
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
PL+ + D T+QD+ KI P
Sbjct: 65 HPLDYIAFDRTMQDLVYKIVP 85
>gi|357131609|ref|XP_003567429.1| PREDICTED: uncharacterized protein LOC100828382 [Brachypodium
distachyon]
Length = 328
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIKCMGQ 391
+W +L A +Q LPQI SYLRI+D N+ V + KY+ KL L +VE+ C G
Sbjct: 211 LWLTLQADPNQIREPILPQIPKSYLRIRDGNMKVEVVMKYMADKLGLTQSHQVELACRGH 270
Query: 392 PVIPTLQLYNLVD-LWLQTASTS------DRVPAMIGSSAK--DFVMVLTYARKVRD 439
+ P L + + D +W S + + +P S D VM L Y+ K RD
Sbjct: 271 LLPPFLLMKYVRDCIWCGGGSPAAVEEEDEELPRRRSQSPAPTDHVMTLFYSTKCRD 327
>gi|113675578|ref|NP_001038700.1| polycomb group RING finger protein 5-B [Danio rerio]
gi|123887311|sp|Q1JPS1.1|PCF5B_DANRE RecName: Full=Polycomb group RING finger protein 5-B
gi|94574392|gb|AAI16620.1| Zgc:136815 [Danio rerio]
Length = 232
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC +C L TT++ECLHTFC+ CI D CP C I + PLE LR D+
Sbjct: 16 ITCFVCKGYLIKPTTVTECLHTFCKSCIVQHFEDSND--CPKCGIQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRKVKAPE 104
TL++V K+ P R K + E
Sbjct: 74 TLEEVIFKLVPGLREKEQQQE 94
>gi|148224664|ref|NP_001084523.1| polycomb group ring finger 2 [Xenopus laevis]
gi|46250310|gb|AAH68725.1| MGC81178 protein [Xenopus laevis]
Length = 317
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
++K + + C +C DA TI ECLH+FC+ CI + E + CP+C+ +
Sbjct: 4 TTRIKMTELNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYL--EAHKFCPMCDSQVH 61
Query: 73 -CVPLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 62 KGRPLLSIRSDKTLQDIVYKLVPGLFRDEMKRRR 95
>gi|47208291|emb|CAF95067.1| unnamed protein product [Tetraodon nigroviridis]
Length = 224
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C L TT++ECLHTFC+ CI D CP C I + PLE LR D+
Sbjct: 2 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEDSND--CPKCGIQVHETNPLEMLRLDN 59
Query: 84 TLQDVRAKIFP-LKRRKVKAPEAVPS 108
TL+++ K+ P L+ + + VPS
Sbjct: 60 TLEEIIFKLVPGLREKNLTCHRFVPS 85
>gi|431895476|gb|ELK04992.1| Cytosolic purine 5'-nucleotidase [Pteropus alecto]
Length = 897
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 133 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 190
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 191 QLQDIVYKL 199
>gi|328777331|ref|XP_003249319.1| PREDICTED: hypothetical protein LOC100576671 [Apis mellifera]
Length = 867
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ CP+C L DATT+ ECLH+FCR CI ++S CPVCN+
Sbjct: 28 IVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSS-GARACPVCNV 71
>gi|355748462|gb|EHH52945.1| E3 ubiquitin-protein ligase RING1 [Macaca fascicularis]
Length = 401
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQT---TMTRRRSNAAARKAAALRGSNLST 158
S + R+ A R RS A R + GS+ +T
Sbjct: 139 SSIEEGLRMQAMHRCEGQERSRSGGAQRVRRPIPGSDQTT 178
>gi|325187782|emb|CCA22327.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 244
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+N V V +I C +C+ LR+A TI ECLH+FC+ CIY + CP CN+
Sbjct: 9 DNRTVTVPLISINHHFVCVLCDGYLREAHTIPECLHSFCKSCIYRHFLIYQERTCPKCNL 68
Query: 70 DLGCVPLEKLRPDHTLQDVRAKIFP 94
L P+ L D +Q++ ++P
Sbjct: 69 LLKPCPITTLVSDQQIQNLLDCVWP 93
>gi|410926339|ref|XP_003976636.1| PREDICTED: polycomb group RING finger protein 5-A-like [Takifugu
rubripes]
Length = 244
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC +C L TT++ECLHTFC+ CI D CP C I + PLE LR D+
Sbjct: 17 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEDSND--CPKCGIQVHETNPLEMLRLDN 74
Query: 84 TLQDVRAKIFPLKRRKVKAPE 104
TL+++ K+ P R K + E
Sbjct: 75 TLEEIIFKLVPGLREKEEQDE 95
>gi|307204964|gb|EFN83503.1| E3 ubiquitin-protein ligase RING1 [Harpegnathos saltator]
Length = 399
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDVITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNA----AARKAAALRGSNLSTDKPPKKEEDSVEDNEDGAS 177
+ + ++ +Q R R NA A A + +N S P ++ ++
Sbjct: 138 NSITEGIKLQSQNRPQRSRKNANESENASNATSYNNTNTSGPTTPNASANAANQSDS--- 194
Query: 178 SPETLNKLSQNVKPMQS---SSSAQPSQPIS 205
SQ+ P+ S SSS+Q + IS
Sbjct: 195 --------SQSTGPLNSGGISSSSQNANSIS 217
>gi|255543168|ref|XP_002512647.1| hypothetical protein RCOM_1437950 [Ricinus communis]
gi|223548608|gb|EEF50099.1| hypothetical protein RCOM_1437950 [Ricinus communis]
Length = 354
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 40/64 (62%)
Query: 327 RRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEI 386
R + IWF+L AS++Q LPQIS SYLRIKD + V + KYL+ KL L SESE
Sbjct: 290 RPHSGIWFTLQASQNQAQEPFLPQISKSYLRIKDGRMTVRLLMKYLVNKLRLDSESESAE 349
Query: 387 KCMG 390
MG
Sbjct: 350 NKMG 353
>gi|340723907|ref|XP_003400328.1| PREDICTED: hypothetical protein LOC100651499 [Bombus terrestris]
Length = 1412
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CP+C L DATT+ ECLH+FCR CI ++ E CP C L ++ D
Sbjct: 17 LICPLCIGYLIDATTVVECLHSFCRSCILKHLNRE--AHCPSCKHVLNKA-KPNIKADKA 73
Query: 85 LQDVRAKIFP------LKRRK---VKAPEAVPSVTLPVRRKERSLSSLVVSAP 128
LQD+ K+ P ++RR+ K PE + P +R E +S ++ AP
Sbjct: 74 LQDIVYKLVPGLYHKEMRRRREFYKKHPEHA-DLATPEQRGE-DVSGRLIFAP 124
>gi|383857689|ref|XP_003704336.1| PREDICTED: uncharacterized protein LOC100877547 [Megachile
rotundata]
Length = 834
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ CP+C L DATT+ ECLH+FCR CI ++S CPVCN+
Sbjct: 33 IVCPLCRGYLIDATTLMECLHSFCRGCIVRRLSS-GARACPVCNV 76
>gi|350426618|ref|XP_003494492.1| PREDICTED: hypothetical protein LOC100746715 [Bombus impatiens]
Length = 1821
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CP+C L DATT+ ECLH+FCR CI ++ E CP C L ++ D
Sbjct: 17 LICPLCIGYLIDATTVVECLHSFCRSCILKHLNREAY--CPSCKHVLNKA-KPNIKADKA 73
Query: 85 LQDVRAKIFP------LKRRK---VKAPEAVPSVTLPVRRKERSLSSLVVSAP 128
LQD+ K+ P ++RR+ K PE + P +R E +S ++ AP
Sbjct: 74 LQDIVYKLVPGLYHKEMRRRREFYKKHPEHA-DLATPEQRGE-DVSGRLIFAP 124
>gi|350426395|ref|XP_003494425.1| PREDICTED: hypothetical protein LOC100748744 [Bombus impatiens]
Length = 849
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CP+C L DATT+ ECLH+FCR CI ++S CPVCN+ L PD
Sbjct: 31 IVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSS-GARACPVCNVATS----PPLLPDVK 85
Query: 85 LQDVRAKIFP 94
LQ + + P
Sbjct: 86 LQRLVYLVVP 95
>gi|71896207|ref|NP_001025573.1| polycomb group ring finger 2 [Xenopus (Silurana) tropicalis]
gi|60552364|gb|AAH91007.1| pcgf2 protein [Xenopus (Silurana) tropicalis]
Length = 317
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG- 72
+++K + + C +C DA TI ECLH+FC+ CI + E + CP+C+ +
Sbjct: 5 MRIKMTELNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYL--EAHKFCPMCDSQVHK 62
Query: 73 CVPLEKLRPDHTLQDVRAKIFP------LKRRK 99
PL +R D TLQD+ K+ P +KRR+
Sbjct: 63 GRPLLSIRSDKTLQDIVYKLVPGLFRDEMKRRR 95
>gi|226479778|emb|CAX73185.1| Polycomb complex protein BMI-1 [Schistosoma japonicum]
Length = 354
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 20/115 (17%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIECCPVCNIDLGCV-PLEKLRP 81
+TC +C L DATTI ECLH+FCR CI Y K++ CPVC L P +RP
Sbjct: 16 LTCNLCRGYLIDATTIVECLHSFCRSCILTYLKLNTT----CPVCETLLHKTKPHCAIRP 71
Query: 82 DHTLQDVRAKIFP-------LKRRKVKAPEAVPSV----TLPVRRKERSLSSLVV 125
D LQ + K+ P L RRK EA PS P +R + +L++ V+
Sbjct: 72 DRALQAIVYKLIPNLFEKEMLCRRKFY--EAHPSYHSRSLSPEKRGDITLNTYVL 124
>gi|197111886|gb|ACH43057.1| BMI1-like protein [Schistosoma japonicum]
Length = 354
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 20/115 (17%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIECCPVCNIDLG-CVPLEKLRP 81
+TC +C L DATTI ECLH+FCR CI Y K++ CPVC L P +RP
Sbjct: 16 LTCNLCRGYLIDATTIVECLHSFCRSCILTYLKLNTT----CPVCETLLHKTKPHCAIRP 71
Query: 82 DHTLQDVRAKIFP-------LKRRKVKAPEAVPSV----TLPVRRKERSLSSLVV 125
D LQ + K+ P L RRK EA PS P +R + +L++ V+
Sbjct: 72 DRALQAIVYKLIPNLFEKEMLCRRKFY--EAHPSYHSRSLSPEKRGDITLNTYVL 124
>gi|402583966|gb|EJW77909.1| hypothetical protein WUBG_11180 [Wuchereria bancrofti]
Length = 553
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C + L DA T++ECLH++CR C+ D I E+ C C G E D T
Sbjct: 13 LCCSLCKSYLIDAVTLTECLHSYCRACLLDNIEKTEVYHCTKCAASFGRDLSEAFVRDDT 72
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 73 LQKLVYKMVP 82
>gi|340723698|ref|XP_003400226.1| PREDICTED: hypothetical protein LOC100648837 [Bombus terrestris]
Length = 843
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CP+C L DATT+ ECLH+FCR CI ++S CPVCN+ L PD
Sbjct: 28 IVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSS-GARACPVCNVATS----PPLLPDVK 82
Query: 85 LQDVRAKIFP 94
LQ + + P
Sbjct: 83 LQRLVYLVVP 92
>gi|380012177|ref|XP_003690163.1| PREDICTED: uncharacterized protein LOC100863675 [Apis florea]
Length = 846
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ CP+C L DATT+ ECLH+FCR CI ++S CPVCN+
Sbjct: 18 IVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSS-GARACPVCNV 61
>gi|401416403|ref|XP_003872696.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488921|emb|CBZ24170.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 524
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 10 NNLVVKVKRET----IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCP 65
+ + ++K+ET ++A +TCP+CN++ ++ C+H FC CI I+ E CP
Sbjct: 162 DYMFRRLKQETTRARMSAELTCPVCNSIFHRPCSVLPCMHVFCAGCISGWIAQGEQHTCP 221
Query: 66 VCNIDLGCVPLEKLRPDHTLQDVRAKIF---PLKRR------KVKAPEAVPSVTLPVRRK 116
C + + +RP H LQ A P RR K+ A + + V + + ++
Sbjct: 222 KCRVS-----ITGIRPTHRLQSSAANYLLRNPASRRPVEDLAKLDAADTIHPVGMSIGKR 276
Query: 117 ERSLSSLVVSA----PRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDS 168
RS + P + + R A R AA + G L P E D+
Sbjct: 277 SRSDNDDCDDDGKCRPHSDSGSDTVR-----AVRHAALIFGHTLPLAGPQCAECDT 327
>gi|357443051|ref|XP_003591803.1| hypothetical protein MTR_1g093160 [Medicago truncatula]
gi|355480851|gb|AES62054.1| hypothetical protein MTR_1g093160 [Medicago truncatula]
Length = 116
Score = 58.5 bits (140), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 43/108 (39%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHT----------------------------- 46
V + + A +TCP+C+ + R+ TTI ECLHT
Sbjct: 6 VNKAKLTAPLTCPLCSNIFREPTTIPECLHTCKSFLFSSSFSPLFNYAMMNIMPCFHLCL 65
Query: 47 --------------FCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLR 80
CR+CI K DE + CPVC +DLG PL+KL+
Sbjct: 66 LCDEYMPKSLSLVTVCRECIERKFIDERLNHCPVCKVDLGYYPLDKLK 113
>gi|328777335|ref|XP_393893.4| PREDICTED: hypothetical protein LOC410413 [Apis mellifera]
Length = 1024
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CP+C L DATT+ ECLH+FCR CI ++ E CP C L ++ D
Sbjct: 17 LICPLCRGYLIDATTVVECLHSFCRSCILKHLNTE--AHCPSCKHVLNKAK-PNIKADKA 73
Query: 85 LQDVRAKIFP-------LKRRKV--KAPEAVPSVTLPVRRKERSLSSLVVSAP 128
LQD+ K+ P KRR+ K PE + P +R E +S ++ AP
Sbjct: 74 LQDIVYKLVPGLYHKEMRKRREFYKKHPEHA-DLATPEQRGE-DVSGRLIFAP 124
>gi|34996481|ref|NP_571288.1| E3 ubiquitin-protein ligase RING2 [Danio rerio]
gi|62901019|sp|Q803I4.1|RING2_DANRE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|27881923|gb|AAH44472.1| Ring finger protein 2 [Danio rerio]
gi|182890358|gb|AAI64137.1| Rnf2 protein [Danio rerio]
Length = 336
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ ++ A + R + + + A
Sbjct: 142 HSIEEGLKIQAMNRLQRGKKHQIENGSGA 170
>gi|73997984|ref|XP_543923.2| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Canis
lupus familiaris]
Length = 256
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C I + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGIQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|410900956|ref|XP_003963962.1| PREDICTED: polycomb group RING finger protein 6-like [Takifugu
rubripes]
Length = 255
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDHTL 85
C +C L DA+TI+ECLHTFC+ CI CP C+I + PL +RPD L
Sbjct: 39 CGLCCGFLIDASTITECLHTFCKSCIVKHFFYSNR--CPTCSIVVHETQPLYNIRPDRQL 96
Query: 86 QDVRAKIFPL 95
QD+ K+ P
Sbjct: 97 QDIVYKMVPF 106
>gi|449682260|ref|XP_002161941.2| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Hydra
magnipapillata]
Length = 325
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + + ++ + + CPIC +L + T ECLH FC CI +
Sbjct: 23 RTPQEVITDDTEIAISPRSLHSELMCPICLDMLTNTMTTKECLHRFCHDCIITALRAGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L + LRPD + AKI+P R + +A + L +++L+
Sbjct: 83 E-CPTCRKKL--ISKRSLRPDPNFDSLIAKIYP-NRDEYEAHQEQALEKLHQHTNQQALT 138
Query: 122 SLVVSAPRVSAQTTMTR--RRSNAAARKAAALRGSNLSTDKPPKKEEDSVE---DNEDGA 176
+ + R+ A+ + R ++ A A + + + P +DS E +N D A
Sbjct: 139 NSIEEGLRIQARNRLNRMLKQQRKQAEHALVDHSATVKEEDSPVISQDSGEMSTENNDSA 198
>gi|196002751|ref|XP_002111243.1| hypothetical protein TRIADDRAFT_54995 [Trichoplax adhaerens]
gi|190587194|gb|EDV27247.1| hypothetical protein TRIADDRAFT_54995 [Trichoplax adhaerens]
Length = 169
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-C 73
+VK + I + C +C L DATTI+ECLH+FCR CI + CP+CN+ +
Sbjct: 6 QVKVQQINPHVICYLCQGYLIDATTITECLHSFCRSCIVKHFDKSLL--CPLCNLRVHET 63
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
P +R D TLQ++ + P
Sbjct: 64 RPHLNIRSDTTLQEIVYGLVP 84
>gi|192455614|ref|NP_001122184.1| polycomb group RING finger protein 5-A [Danio rerio]
gi|306755928|sp|B3DK16.1|PCF5A_DANRE RecName: Full=Polycomb group RING finger protein 5-A
gi|190338518|gb|AAI63687.1| Zgc:194668 [Danio rerio]
gi|190338958|gb|AAI63702.1| Zgc:194668 [Danio rerio]
Length = 234
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L T ++ECLHTFC+ CI EE CP C I + PLE LR D
Sbjct: 16 ITCSICRGYLIKPTAVTECLHTFCKSCIVQHF--EESNECPECGIQVHETNPLEMLRLDK 73
Query: 84 TLQDVRAKIFPLKRRKVKAPEA 105
TL+++ K+ P R K + E+
Sbjct: 74 TLEEIIFKLVPGLREKEEHQES 95
>gi|42562365|ref|NP_174129.2| RING finger protein [Arabidopsis thaliana]
gi|332192788|gb|AEE30909.1| RING finger protein [Arabidopsis thaliana]
Length = 291
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%)
Query: 327 RRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEI 386
R + +WF L AS+ Q LPQ++ SYLRIKD I V + KYLM KL+L SESEV I
Sbjct: 232 RPHSGLWFLLQASQFQEREPFLPQVNKSYLRIKDGRITVRLLIKYLMKKLELDSESEVNI 291
>gi|6572993|gb|AAF17506.1|AF196346_1 Ring finger protein 1b [Danio rerio]
Length = 259
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ ++ A + R + + + A
Sbjct: 142 HSIEEGLKIQAMNRLQRGKKHQIENGSGA 170
>gi|380012175|ref|XP_003690162.1| PREDICTED: uncharacterized protein LOC100863555 [Apis florea]
Length = 1019
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CP+C L DATT+ ECLH+FCR CI ++ E CP C L ++ D
Sbjct: 17 LICPLCRGYLIDATTVVECLHSFCRSCILKHLNTE--AHCPSCKHVLNKAK-PNIKADKA 73
Query: 85 LQDVRAKIFP-------LKRRKV--KAPEAVPSVTLPVRRKERSLSSLVVSAP 128
LQD+ K+ P KRR+ K PE + P +R E +S ++ AP
Sbjct: 74 LQDIVYKLVPGLYHKEMRKRREFYKKHPEHA-DLATPEQRGE-DVSGRLIFAP 124
>gi|431838990|gb|ELK00919.1| Putative E3 ubiquitin-protein ligase HECTD2 [Pteropus alecto]
Length = 951
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|74208829|dbj|BAE21174.1| unnamed protein product [Mus musculus]
Length = 281
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 135 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 192
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 193 QLQDIVYKL 201
>gi|46403229|gb|AAS92634.1| ring finger protein 2 [Danio rerio]
Length = 338
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 28 RTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 87
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 88 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 143
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ ++ A + R + + + A
Sbjct: 144 HSIEEGLKIQAMNRLQRGKKHQIENGSGA 172
>gi|297687308|ref|XP_002821159.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Pongo
abelii]
Length = 350
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 189
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 190 QLQDIVYKL 198
>gi|198422095|ref|XP_002129149.1| PREDICTED: similar to polycomb group ring finger 1 [Ciona
intestinalis]
Length = 321
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+K+K + ++C IC L DATTI+ECLH+FC+ CI ++ CP+C++ L
Sbjct: 116 IKIKLADLNIHISCKICCGYLVDATTITECLHSFCKSCITKHLA--VYLTCPICDVKLQN 173
Query: 74 VPL-EKLRPDHTLQDVRAKIFP 94
+ ++ D LQD+ K+ P
Sbjct: 174 ANIYSSVKADIVLQDIVDKLLP 195
>gi|13537206|dbj|BAB40779.1| hMBLR [Homo sapiens]
gi|16307386|gb|AAH10235.1| Polycomb group ring finger 6 [Homo sapiens]
gi|167773431|gb|ABZ92150.1| polycomb group ring finger 6 [synthetic construct]
gi|167774201|gb|ABZ92535.1| polycomb group ring finger 6 [synthetic construct]
Length = 352
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 134 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 191
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 192 QLQDIVYKL 200
>gi|58761530|ref|NP_001011663.1| polycomb group RING finger protein 6 isoform a [Homo sapiens]
gi|116242703|sp|Q9BYE7.2|PCGF6_HUMAN RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=Mel18 and Bmi1-like RING finger; AltName: Full=RING
finger protein 134
gi|119570033|gb|EAW49648.1| polycomb group ring finger 6, isoform CRA_b [Homo sapiens]
gi|306921473|dbj|BAJ17816.1| polycomb group ring finger 6 [synthetic construct]
Length = 350
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 189
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 190 QLQDIVYKL 198
>gi|321476884|gb|EFX87844.1| hypothetical protein DAPPUDRAFT_37015 [Daphnia pulex]
Length = 89
Score = 58.2 bits (139), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPL-EKLRPDH 83
+TC IC L DATTI+EC+HTFC+ C+ ++ CP C + L L E+L+ DH
Sbjct: 1 LTCSICQGYLIDATTITECMHTFCKSCLLQRVESGRT-FCPRCGVQLQRSRLGEQLKLDH 59
Query: 84 TLQ 86
+Q
Sbjct: 60 AVQ 62
>gi|114632654|ref|XP_508012.2| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Pan
troglodytes]
gi|410212244|gb|JAA03341.1| polycomb group ring finger 6 [Pan troglodytes]
gi|410259878|gb|JAA17905.1| polycomb group ring finger 6 [Pan troglodytes]
gi|410331781|gb|JAA34837.1| polycomb group ring finger 6 [Pan troglodytes]
Length = 350
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 189
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 190 QLQDIVYKL 198
>gi|319803023|ref|NP_001188361.1| E3 ubiquitin-protein ligase RING1 [Bombyx mori]
gi|317175909|dbj|BAJ54070.1| sex combs extra [Bombyx mori]
Length = 377
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ ++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L + + SL
Sbjct: 81 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQELVLAKLSMSHSQASLV 136
Query: 122 SLVVSAPRVSAQTTMTRRRSN 142
+ + ++ +Q R R N
Sbjct: 137 NSITEGIKLQSQNRPQRSRKN 157
>gi|28076973|ref|NP_081930.1| polycomb group RING finger protein 6 [Mus musculus]
gi|77416553|sp|Q99NA9.1|PCGF6_MOUSE RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=Mel18 and Bmi1-like RING finger; AltName: Full=RING
finger protein 134
gi|13537208|dbj|BAB40780.1| mMBLR [Mus musculus]
gi|16740622|gb|AAH16195.1| Polycomb group ring finger 6 [Mus musculus]
gi|58476686|gb|AAH89460.1| Polycomb group ring finger 6 [Mus musculus]
gi|148710077|gb|EDL42023.1| polycomb group ring finger 6 [Mus musculus]
Length = 353
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 135 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 192
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 193 QLQDIVYKL 201
>gi|196009860|ref|XP_002114795.1| hypothetical protein TRIADDRAFT_28310 [Trichoplax adhaerens]
gi|190582857|gb|EDV22929.1| hypothetical protein TRIADDRAFT_28310 [Trichoplax adhaerens]
Length = 214
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C L DA+TI+ECLHT+C+ C+ + D CP C+I + PL +R D
Sbjct: 12 ITCGLCKGYLVDASTITECLHTYCKSCLVRYVQDSNR--CPTCDIVIHETQPLYNIRMDR 69
Query: 84 TLQDVRAKIFP 94
T+QD+ K P
Sbjct: 70 TMQDIVDKFVP 80
>gi|313232453|emb|CBY24121.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 5 REMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIEC- 63
+E+ V V I+ + CPICN L +AT I+ECLH FCR C+ K+ + EC
Sbjct: 26 KELDKKEEYVGVSLSPISNLLACPICNGYLVNATAITECLHVFCRSCLIRKLQQTQ-ECP 84
Query: 64 CPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
P C + LR D TLQD+ + P
Sbjct: 85 LPHCREKVIVSAEGALRYDRTLQDLIHLLVP 115
>gi|158254794|dbj|BAF83368.1| unnamed protein product [Homo sapiens]
Length = 350
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 189
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 190 QLQDIVYKL 198
>gi|73998781|ref|XP_852021.1| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Canis
lupus familiaris]
Length = 349
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 131 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 188
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 189 QLQDIVYKL 197
>gi|61557118|ref|NP_001013172.1| polycomb group RING finger protein 6 [Rattus norvegicus]
gi|77416554|sp|Q5XI70.1|PCGF6_RAT RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=RING finger protein 134
gi|53733579|gb|AAH83820.1| Polycomb group ring finger 6 [Rattus norvegicus]
Length = 351
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 133 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 190
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 191 QLQDIVYKL 199
>gi|224053549|ref|XP_002297867.1| predicted protein [Populus trichocarpa]
gi|222845125|gb|EEE82672.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%)
Query: 327 RRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEV 384
R + IWF L AS++Q LPQIS SYLRIKD + V + KYL+ KL L SESEV
Sbjct: 273 RPHSGIWFLLQASQNQTKEPFLPQISKSYLRIKDGRMTVRLLMKYLVNKLGLDSESEV 330
>gi|302564245|ref|NP_001181540.1| polycomb group RING finger protein 6 [Macaca mulatta]
gi|402881389|ref|XP_003904256.1| PREDICTED: polycomb group RING finger protein 6 [Papio anubis]
Length = 350
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 189
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 190 QLQDIVYKL 198
>gi|301614743|ref|XP_002936851.1| PREDICTED: polycomb group RING finger protein 6-like [Xenopus
(Silurana) tropicalis]
Length = 296
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 78 ILCSICKGYLIDATTITECLHTFCKSCIVKHFYYTNR--CPKCNIVVHQTQPLYNIRLDR 135
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 136 QLQDIVFKL 144
>gi|296221130|ref|XP_002756615.1| PREDICTED: polycomb group RING finger protein 6 isoform 1
[Callithrix jacchus]
Length = 350
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 189
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 190 QLQDIVYKL 198
>gi|291238522|ref|XP_002739177.1| PREDICTED: polycomb group ring finger 5-like [Saccoglossus
kowalevskii]
Length = 252
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L +TI+ECLHTFC+ CI EE + CP C I + P E LR D
Sbjct: 14 ITCSICGGYLIKPSTIAECLHTFCKSCIVRHF--EESKNCPRCGIQVHETHPCEMLRMDK 71
Query: 84 TLQDVRAKIFP 94
T++D+ K+ P
Sbjct: 72 TMEDIVFKLVP 82
>gi|66523966|ref|XP_393984.2| PREDICTED: e3 ubiquitin-protein ligase RING2-A isoform 1 [Apis
mellifera]
Length = 403
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 45 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 104
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 105 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 160
Query: 122 SLVVSAPRVSAQTTMTRRRSNA 143
+ + ++ +Q R R NA
Sbjct: 161 NSITEGIKLQSQNRSQRSRKNA 182
>gi|260827951|ref|XP_002608927.1| hypothetical protein BRAFLDRAFT_85508 [Branchiostoma floridae]
gi|229294281|gb|EEN64937.1| hypothetical protein BRAFLDRAFT_85508 [Branchiostoma floridae]
Length = 217
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGCVPLEKLRPDH 83
+TC +C L DATTI+ECLHTFC+ CI + EE CP C + PL + D
Sbjct: 15 ITCMLCKGYLVDATTITECLHTFCKSCIVQYL--EENNDCPTCKQVIHQSHPLNYISHDR 72
Query: 84 TLQDVRAKIFP 94
T+QD+ K+ P
Sbjct: 73 TMQDIVYKLVP 83
>gi|198414051|ref|XP_002130076.1| PREDICTED: similar to polycomb group ring finger 1 [Ciona
intestinalis]
Length = 275
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
+ ++L++K++ T+ + C +C DATTISEC HTFC+ CI + + + CP
Sbjct: 11 LQDSDLILKIR--TLNPHIVCALCAGYFIDATTISECSHTFCKSCIVKHLQTK--KSCPE 66
Query: 67 CNIDLG-CVPLEKLRPDHTLQDVRAKIFP 94
C+ + PL LR D +QDV K+ P
Sbjct: 67 CSQKIHETQPLMNLRSDRVMQDVVYKLVP 95
>gi|340724527|ref|XP_003400633.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Bombus
terrestris]
gi|380021048|ref|XP_003694386.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 1 [Apis
florea]
Length = 380
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNA 143
+ + ++ +Q R R NA
Sbjct: 138 NSITEGIKLQSQNRSQRSRKNA 159
>gi|414878865|tpg|DAA55996.1| TPA: hypothetical protein ZEAMMB73_105295 [Zea mays]
Length = 338
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 22/125 (17%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDL-------PSESEV 384
+W +L A+ +Q LPQI+ SYLRIKD N+ V + KYL KL + S +V
Sbjct: 206 LWLTLQAAPNQSREPVLPQIAKSYLRIKDSNMTVEVVMKYLAEKLGVARSRSRSRSHQQV 265
Query: 385 EIKCMGQPVIPTLQLYNLVD-LWLQTASTS-------DRVPA-------MIGSSAKDFVM 429
E+ C GQ + P L + ++ + +W TA+ + + PA S+A D VM
Sbjct: 266 ELTCRGQVLPPFLLVRDVWETIWCSTAAAAAPREGVEEETPADDHLTARRRSSAATDHVM 325
Query: 430 VLTYA 434
L Y+
Sbjct: 326 TLCYS 330
>gi|355783070|gb|EHH64991.1| hypothetical protein EGM_18328 [Macaca fascicularis]
Length = 350
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 189
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 190 QLQDIVYKL 198
>gi|432904422|ref|XP_004077323.1| PREDICTED: polycomb group RING finger protein 5-A-like [Oryzias
latipes]
Length = 247
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC +C L TT++ECLHTFC+ CI EE CP C I + PLE LR D+
Sbjct: 17 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHF--EESNDCPKCGIQVHETNPLEMLRLDN 74
Query: 84 TLQDVRAKIFP 94
TL+++ K+ P
Sbjct: 75 TLEEIIFKLVP 85
>gi|118094209|ref|XP_422295.2| PREDICTED: E3 ubiquitin-protein ligase RING2 [Gallus gallus]
Length = 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|395530972|ref|XP_003767558.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Sarcophilus harrisii]
Length = 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|126273453|ref|XP_001378665.1| PREDICTED: polycomb group RING finger protein 6-like [Monodelphis
domestica]
Length = 425
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 207 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 264
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 265 QLQDIVYKL 273
>gi|363743503|ref|XP_003642857.1| PREDICTED: polycomb group RING finger protein 2-like [Gallus
gallus]
Length = 321
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C DA TI ECLH+FC+ CI + E + CP+C+ + PL +R D
Sbjct: 16 LMCALCGGYFIDAATIVECLHSFCKTCIVRYL--EANKYCPMCDAQVHKTRPLLSIRSDR 73
Query: 84 TLQDVRAKIFP------LKRRK 99
TLQDV K+ P +KRR+
Sbjct: 74 TLQDVVYKLVPGLFTDEMKRRR 95
>gi|443693058|gb|ELT94511.1| hypothetical protein CAPTEDRAFT_227017 [Capitella teleta]
Length = 521
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L ++ + + + + C +C+ L DATTI ECLH+FC+ C+ + + ++ + CP C + +
Sbjct: 3 LTCRLNLQELNSHLLCSLCSGYLIDATTIIECLHSFCKTCLVNHL--QKTKFCPTCEVQI 60
Query: 72 GCV-PLEKLRPDHTLQDVRAKIFP 94
PLE +R D LQ + K+ P
Sbjct: 61 HKTKPLENVRADKALQALVYKLVP 84
>gi|126306334|ref|XP_001366901.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Monodelphis
domestica]
gi|149636359|ref|XP_001516692.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Ornithorhynchus
anatinus]
Length = 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|449277702|gb|EMC85785.1| E3 ubiquitin-protein ligase RING2 [Columba livia]
Length = 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|326924674|ref|XP_003208550.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Meleagris
gallopavo]
Length = 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|224056986|ref|XP_002190866.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Taeniopygia guttata]
Length = 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|403260162|ref|XP_003922551.1| PREDICTED: polycomb group RING finger protein 6 [Saimiri
boliviensis boliviensis]
Length = 418
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 200 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 257
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 258 QLQDIVYKL 266
>gi|71027873|ref|XP_763580.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350533|gb|EAN31297.1| hypothetical protein TP03_0552 [Theileria parva]
Length = 735
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L V+ + +TCP+C L +A TI +C+HTFC+ C+ + + CP C +
Sbjct: 257 LDVRFNLTILIDILTCPLCKGLFHNAQTIRDCMHTFCKSCLILSTFENGL-VCPTCFSPI 315
Query: 72 GCVPLEKLRPDHTLQDVRAKIFP 94
E + PD +Q + K+FP
Sbjct: 316 LSSITEGVEPDTNIQTIVDKLFP 338
>gi|344274771|ref|XP_003409188.1| PREDICTED: polycomb group RING finger protein 6-like isoform 1
[Loxodonta africana]
Length = 346
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 128 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 185
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 186 QLQDIVYKL 194
>gi|449505849|ref|XP_002193611.2| PREDICTED: polycomb group RING finger protein 6 [Taeniopygia
guttata]
Length = 312
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 96 ILCSICKGYFIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 153
Query: 84 TLQDVRAKIFP-------------LKRRKVKAPE-AVPSVTLPVRRKERSLSSLVVSAP 128
LQD+ K+ K R ++ P+ AVP P R + R + V P
Sbjct: 154 QLQDIVYKLVVNLEEREKKQMHDFYKERGLEVPKPAVPQPVPPSRGRPRKVLGSVFRIP 212
>gi|399216056|emb|CCF72744.1| unnamed protein product [Babesia microti strain RI]
Length = 428
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIECCPVCNIDL 71
VK + + + +TC +C L +A TI CLHTFC+ CI Y + ++ CPVC+ ++
Sbjct: 175 VKFRLKILFNHLTCKLCKGLFFNAYTIKNCLHTFCKSCIITYAILVGQQ---CPVCHQNI 231
Query: 72 GCVPLEKLRPDHTLQDVRAKIFP 94
E + D+ +Q + K+FP
Sbjct: 232 NTNLEESIEYDNCIQSMVDKLFP 254
>gi|6005747|ref|NP_009143.1| E3 ubiquitin-protein ligase RING2 [Homo sapiens]
gi|332230654|ref|XP_003264507.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nomascus
leucogenys]
gi|332811387|ref|XP_514057.3| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Pan
troglodytes]
gi|397489263|ref|XP_003815650.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Pan
paniscus]
gi|402857835|ref|XP_003893444.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Papio
anubis]
gi|426333040|ref|XP_004028095.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Gorilla
gorilla gorilla]
gi|62901044|sp|Q99496.1|RING2_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING2; AltName:
Full=Huntingtin-interacting protein 2-interacting
protein 3; Short=HIP2-interacting protein 3; AltName:
Full=Protein DinG; AltName: Full=RING finger protein 1B;
Short=RING1b; AltName: Full=RING finger protein 2;
AltName: Full=RING finger protein BAP-1
gi|4769008|gb|AAD29717.1|AF141327_1 ring finger protein BAP-1 [Homo sapiens]
gi|1785643|emb|CAA71596.1| dinG [Homo sapiens]
gi|15214887|gb|AAH12583.1| Ring finger protein 2 [Homo sapiens]
gi|119611594|gb|EAW91188.1| ring finger protein 2, isoform CRA_b [Homo sapiens]
gi|123988874|gb|ABM83858.1| ring finger protein 2 [synthetic construct]
gi|123999200|gb|ABM87180.1| ring finger protein 2 [synthetic construct]
gi|189054551|dbj|BAG37324.1| unnamed protein product [Homo sapiens]
gi|208967348|dbj|BAG73688.1| ring finger protein 2 [synthetic construct]
gi|380815346|gb|AFE79547.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|383412967|gb|AFH29697.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|410221702|gb|JAA08070.1| ring finger protein 2 [Pan troglodytes]
gi|410263314|gb|JAA19623.1| ring finger protein 2 [Pan troglodytes]
gi|410305956|gb|JAA31578.1| ring finger protein 2 [Pan troglodytes]
gi|410331985|gb|JAA34939.1| ring finger protein 2 [Pan troglodytes]
Length = 336
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|387018154|gb|AFJ51195.1| Polycomb group RING finger protein 5-like [Crotalus adamanteus]
Length = 256
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCCICKGYLIKPTTVTECLHTFCKSCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRKVKAPEA 105
TL+++ K+ P R K EA
Sbjct: 74 TLEEIIFKLVPGLREKELHREA 95
>gi|2239142|emb|CAA73380.1| polycomb-M33 interacting protein Ring1B [Mus musculus]
Length = 339
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|410976039|ref|XP_003994433.1| PREDICTED: polycomb group RING finger protein 6 [Felis catus]
Length = 272
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 54 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 111
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 112 QLQDIVYKL 120
>gi|444726159|gb|ELW66699.1| putative E3 ubiquitin-protein ligase HECTD2 [Tupaia chinensis]
Length = 653
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKR 97
TL+++ K+ P R
Sbjct: 74 TLEEIIFKLVPGLR 87
>gi|197097984|ref|NP_001127433.1| E3 ubiquitin-protein ligase RING2 [Pongo abelii]
gi|62900923|sp|Q5R9J5.1|RING2_PONAB RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|55729672|emb|CAH91565.1| hypothetical protein [Pongo abelii]
Length = 336
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|355716862|gb|AES05749.1| ring finger protein 2 [Mustela putorius furo]
Length = 334
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 25 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 84
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 85 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 140
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 141 HSIEEGLKIQAMNRLQRGK 159
>gi|395828157|ref|XP_003787252.1| PREDICTED: polycomb group RING finger protein 6 [Otolemur
garnettii]
Length = 351
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 133 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 190
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 191 QLQDIVYKL 199
>gi|291412444|ref|XP_002722489.1| PREDICTED: ring finger protein 2 [Oryctolagus cuniculus]
Length = 336
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|281353876|gb|EFB29460.1| hypothetical protein PANDA_009706 [Ailuropoda melanoleuca]
Length = 333
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|380021050|ref|XP_003694387.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 2 [Apis
florea]
Length = 369
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNA 143
+ + ++ +Q R R NA
Sbjct: 138 NSITEGIKLQSQNRSQRSRKNA 159
>gi|33563274|ref|NP_035407.1| E3 ubiquitin-protein ligase RING2 [Mus musculus]
gi|296229541|ref|XP_002760304.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Callithrix
jacchus]
gi|403266315|ref|XP_003925335.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|62901047|sp|Q9CQJ4.1|RING2_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|12849049|dbj|BAB28186.1| unnamed protein product [Mus musculus]
gi|12850291|dbj|BAB28663.1| unnamed protein product [Mus musculus]
gi|18043367|gb|AAH20122.1| Ring finger protein 2 [Mus musculus]
gi|26326309|dbj|BAC26898.1| unnamed protein product [Mus musculus]
gi|71059923|emb|CAJ18505.1| Rnf2 [Mus musculus]
gi|74217079|dbj|BAE26638.1| unnamed protein product [Mus musculus]
gi|148707519|gb|EDL39466.1| ring finger protein 2, isoform CRA_b [Mus musculus]
gi|149058413|gb|EDM09570.1| ring finger protein 2 [Rattus norvegicus]
Length = 336
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|405970129|gb|EKC35061.1| Polycomb complex protein BMI-1-B [Crassostrea gigas]
Length = 239
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC +C L +A+TI+EC+HTFC+ CI E CP C+ + P +R D
Sbjct: 64 ITCALCGGYLYEASTITECMHTFCKTCIVR--YTERSLTCPTCDTPIHPTDPFVHIRHDS 121
Query: 84 TLQDVRAKIFP 94
TLQD+ ++ P
Sbjct: 122 TLQDIVYRLLP 132
>gi|148707518|gb|EDL39465.1| ring finger protein 2, isoform CRA_a [Mus musculus]
Length = 337
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 27 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 86
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 87 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 142
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 143 HSIEEGLKIQAMNRLQRGK 161
>gi|155372127|ref|NP_001094673.1| E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|57088937|ref|XP_537164.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Canis lupus
familiaris]
gi|194210405|ref|XP_001490057.2| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Equus caballus]
gi|354477357|ref|XP_003500887.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|410986000|ref|XP_004001389.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING2
[Felis catus]
gi|426240030|ref|XP_004013918.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Ovis aries]
gi|151554874|gb|AAI48045.1| RNF2 protein [Bos taurus]
gi|296478860|tpg|DAA20975.1| TPA: E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|344238862|gb|EGV94965.1| E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|351705546|gb|EHB08465.1| E3 ubiquitin-protein ligase RING2 [Heterocephalus glaber]
gi|440908241|gb|ELR58285.1| E3 ubiquitin-protein ligase RING2 [Bos grunniens mutus]
Length = 336
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|168040556|ref|XP_001772760.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675985|gb|EDQ62474.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1210
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 49/154 (31%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESE-------- 383
+WF+L AS Q + PL QI + Y+R+ D ++ V+ ++KYL+ KL L +E E
Sbjct: 953 LWFTLQASNSQPEASPLQQIPAGYVRVVDDSMTVAAVKKYLVNKLGLDNEDEVQAPDSEQ 1012
Query: 384 --------------------------VEIKCMGQPVIPTLQLYNLVD-LW---------- 406
VE+ C GQP++P++ L + D +W
Sbjct: 1013 SVLSLILSACRSVTPDFEKFADFLRQVELTCNGQPLVPSIPLQQVRDGIWQAPITKVANP 1072
Query: 407 ----LQTASTSDRVPAMIGSSAKDFVMVLTYARK 436
L + + + P + D VMV+TY R+
Sbjct: 1073 CTSRLLSEGRAWKAPDGSVAHVGDVVMVITYGRR 1106
>gi|149690102|ref|XP_001498250.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
6-like [Equus caballus]
Length = 351
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 133 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 190
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 191 QLQDIVYKL 199
>gi|397510729|ref|XP_003825743.1| PREDICTED: polycomb group RING finger protein 6 [Pan paniscus]
Length = 251
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 71 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 128
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 129 QLQDIVYKL 137
>gi|426253029|ref|XP_004020204.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Ovis
aries]
Length = 352
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 134 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 191
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 192 QLQDIVYKL 200
>gi|301756214|ref|XP_002913942.1| PREDICTED: polycomb group RING finger protein 6-like, partial
[Ailuropoda melanoleuca]
Length = 297
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 79 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 136
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 137 QLQDIVYKL 145
>gi|119570032|gb|EAW49647.1| polycomb group ring finger 6, isoform CRA_a [Homo sapiens]
Length = 250
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 32 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 89
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 90 QLQDIVYKL 98
>gi|148222454|ref|NP_001090794.1| ring finger protein 1 [Xenopus (Silurana) tropicalis]
gi|134025969|gb|AAI35192.1| ring1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 4/177 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQDRVLAKLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASS 178
S + ++ A R R + G + D SV N++ S
Sbjct: 139 SSIEEGLKMQAMHRAQRVRKHQHESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAGPS 195
>gi|301770957|ref|XP_002920895.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Ailuropoda
melanoleuca]
Length = 356
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|26354897|dbj|BAC41075.1| unnamed protein product [Mus musculus]
Length = 336
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|392355796|ref|XP_003752135.1| PREDICTED: polycomb group RING finger protein 6-like [Rattus
norvegicus]
Length = 209
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKL 79
+A ++C IC L DAT I+ECLHTFC+ CI E CP CNI + P L
Sbjct: 94 LAPFISCSICKGYLIDATAITECLHTFCKSCIVKHF--EHSNRCPKCNIIVHDAKPHNNL 151
Query: 80 RPDHTLQDVRAKI 92
R D LQ++ K+
Sbjct: 152 RMDPQLQNIVYKL 164
>gi|443728544|gb|ELU14844.1| hypothetical protein CAPTEDRAFT_178639, partial [Capitella teleta]
Length = 277
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C L DAT ECLH FCR CI E CP+C+ + P LRPD
Sbjct: 16 LMCVLCGGYLIDATISVECLHAFCRSCIMKYT--EGCRTCPICDTLIHKTRPQLNLRPDK 73
Query: 84 TLQDVRAKIFP------LKRRKVKAPEAVPS 108
TLQD+ K+ P +KRR+ + EA PS
Sbjct: 74 TLQDLVYKLVPGLFEDEMKRRR-EFYEAHPS 103
>gi|329663653|ref|NP_001192549.1| polycomb group RING finger protein 6 [Bos taurus]
gi|296472801|tpg|DAA14916.1| TPA: Polycomb group ring finger 6-like isoform 2 [Bos taurus]
Length = 351
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 133 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 190
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 191 QLQDIVYKL 199
>gi|119570036|gb|EAW49651.1| polycomb group ring finger 6, isoform CRA_e [Homo sapiens]
Length = 218
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 189
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 190 QLQDIVYKL 198
>gi|355746097|gb|EHH50722.1| hypothetical protein EGM_01592 [Macaca fascicularis]
Length = 336
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|327278154|ref|XP_003223827.1| PREDICTED: polycomb group RING finger protein 5-like [Anolis
carolinensis]
Length = 256
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI EE CP C + PLE LR D+
Sbjct: 16 ITCCICKGYLIKPTTVTECLHTFCKSCIVQHF--EESNDCPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRKVKAPEA 105
TL+++ K+ P R K EA
Sbjct: 74 TLEEIIFKLVPQLREKELHCEA 95
>gi|322796367|gb|EFZ18908.1| hypothetical protein SINV_06659 [Solenopsis invicta]
Length = 379
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ + ++ +Q R R NA + A+
Sbjct: 138 NSITEGIKLQSQNRPQRSRKNANESENAS 166
>gi|428671775|gb|EKX72690.1| hypothetical protein BEWA_012490 [Babesia equi]
Length = 458
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIEC---CPVCNIDLGCVPLEKLRP 81
++C +C L +A T+ EC+HTFC+ C+ IEC CP C + LE +
Sbjct: 189 LSCRLCKGLFYNAHTVRECMHTFCKSCLILS----TIECGLMCPTCFTPIPADILEGIEY 244
Query: 82 DHTLQDVRAKIFP 94
DH +Q + KIFP
Sbjct: 245 DHNIQGLVDKIFP 257
>gi|440912392|gb|ELR61962.1| Polycomb group RING finger protein 6, partial [Bos grunniens mutus]
Length = 296
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 93 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 150
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 151 QLQDIVYKL 159
>gi|363735319|ref|XP_001234043.2| PREDICTED: polycomb group RING finger protein 6 [Gallus gallus]
Length = 413
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 195 ILCSICKGYFIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 252
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 253 QLQDIVYKL 261
>gi|355558944|gb|EHH15724.1| hypothetical protein EGK_01854 [Macaca mulatta]
Length = 246
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ ++ A + R + + A
Sbjct: 142 HSIEEGLKIQAMNRLQRGKKQQTENGSGA 170
>gi|332021896|gb|EGI62232.1| E3 ubiquitin-protein ligase RING2 [Acromyrmex echinatior]
Length = 379
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ + ++ +Q R R NA + A+
Sbjct: 138 NSITEGIKLQSQNRPQRSRKNANESENAS 166
>gi|444729309|gb|ELW69733.1| E3 ubiquitin-protein ligase RING2 [Tupaia chinensis]
Length = 336
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHKNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
++ A + R +
Sbjct: 142 HSTEEGLKIQAMNRLQRGK 160
>gi|324506953|gb|ADY42955.1| Polycomb group RING finger protein 2 [Ascaris suum]
Length = 739
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C + L DA T+SECLH+FCR C+ + E CP C DLG E D
Sbjct: 10 LCCSLCKSYLIDAVTLSECLHSFCRSCLLAHLCHESR--CPKCACDLGPELSEAFVRDDP 67
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 68 LQRIVYKMVP 77
>gi|91095245|ref|XP_970564.1| PREDICTED: similar to ring finger protein 1 [Tribolium castaneum]
gi|270017230|gb|EFA13676.1| hypothetical protein TcasGA2_TC001392 [Tribolium castaneum]
Length = 369
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 16/194 (8%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDVITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPET 181
+ + ++ +Q R R N + +G N PP NE+ +P+
Sbjct: 138 NSITEGIKIQSQNRPNRSRKNNEVERN---QGENPENPVPP---------NENTVGAPQP 185
Query: 182 LNKLSQNVKPMQSS 195
+ N P S
Sbjct: 186 APGVVNNGSPAPSG 199
>gi|307174595|gb|EFN65017.1| E3 ubiquitin-protein ligase RING2 [Camponotus floridanus]
Length = 379
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAA 150
+ + ++ +Q R R NA + A+
Sbjct: 138 NSITEGIKLQSQNRPQRSRKNANESENAS 166
>gi|281352081|gb|EFB27665.1| hypothetical protein PANDA_001793 [Ailuropoda melanoleuca]
Length = 288
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 81 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 138
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 139 QLQDIVYKL 147
>gi|332212078|ref|XP_003255150.1| PREDICTED: polycomb group RING finger protein 6 [Nomascus
leucogenys]
Length = 261
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 54 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 111
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 112 QLQDIVYKL 120
>gi|387019653|gb|AFJ51944.1| e3 ubiquitin-protein ligase RING2-like [Crotalus adamanteus]
Length = 336
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQALNRLQRGK 160
>gi|307189309|gb|EFN73740.1| Polycomb group protein Psc [Camponotus floridanus]
Length = 1377
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLR 80
I + C +C L DATTI ECLH+FCR CI +S CP C L ++
Sbjct: 13 INQHLVCLLCRGYLIDATTIVECLHSFCRSCILKALSTS--AQCPSCKHALNKA-KPNIK 69
Query: 81 PDHTLQDVRAKIFP-------LKRRKV--KAPEAVPSVTLPVRRKE 117
D LQ++ K+ P L+RR+ K PE ++T P +R E
Sbjct: 70 ADKALQEIVYKLVPGLYHREMLRRREFYKKHPEHA-NLTTPEQRGE 114
>gi|345486956|ref|XP_003425596.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 3 [Nasonia
vitripennis]
Length = 389
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNNSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNA 143
+ + ++ +Q R R NA
Sbjct: 138 NSITEGIKLQSQNRPQRSRKNA 159
>gi|432113021|gb|ELK35599.1| Polycomb group RING finger protein 6 [Myotis davidii]
Length = 351
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 133 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 190
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 191 QLQDIVYKL 199
>gi|345486954|ref|XP_003425595.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Nasonia
vitripennis]
Length = 401
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNNSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNA 143
+ + ++ +Q R R NA
Sbjct: 138 NSITEGIKLQSQNRPQRSRKNA 159
>gi|260789153|ref|XP_002589612.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
gi|229274792|gb|EEN45623.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
Length = 350
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ + V ++ + + CPIC +L++ T ECLH FC+ CI +
Sbjct: 28 RTPQEAITDTTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNK 87
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L +++LS
Sbjct: 88 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARLNKHHNQQALS 143
Query: 122 SLVVSAPRVSAQTTMTRRRSN 142
S + ++ A R R +
Sbjct: 144 SSIEEGLKLQALNRAQRVRKH 164
>gi|345486958|ref|XP_001608228.2| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nasonia
vitripennis]
Length = 379
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNNSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNA 143
+ + ++ +Q R R NA
Sbjct: 138 NSITEGIKLQSQNRPQRSRKNA 159
>gi|71043690|ref|NP_001020838.1| E3 ubiquitin-protein ligase RING2 [Rattus norvegicus]
gi|90101447|sp|Q4KLY4.1|RING2_RAT RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|68533722|gb|AAH98941.1| Ring finger protein 2 [Rattus norvegicus]
Length = 308
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQAMNRLQRGK 160
>gi|147899469|ref|NP_001087647.1| E3 ubiquitin-protein ligase RING2-A [Xenopus laevis]
gi|62900962|sp|Q66J69.1|RNG2A_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-A; AltName:
Full=RING finger protein 1B-A; Short=RING1b-A; AltName:
Full=RING finger protein 2-A
gi|51704098|gb|AAH81039.1| MGC81738 protein [Xenopus laevis]
Length = 344
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 4/177 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQDRVLAKLNRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASS 178
S + ++ A R R + G + D SV N++ S
Sbjct: 139 SSIEEGLKMQAMHRAQRVRKHQHESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAGPS 195
>gi|168066495|ref|XP_001785172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663234|gb|EDQ50010.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1126
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 22/97 (22%)
Query: 332 IWFSLVASEDQRGSL---------------------PLPQISSSYLRIKDRNIPVSFIQK 370
+WF+L AS Q L P QI + Y+R+ D N+ V+ ++K
Sbjct: 830 LWFTLQASSSQIRILSDVLTTWTKLSSAVLVRPEASPTQQIPTGYIRVVDGNMTVAAVKK 889
Query: 371 YLMMKLDLPSESEVEIKCMGQPVIPTLQLYNLVD-LW 406
YL KL L SE EVE+ C GQ ++P++ L + D +W
Sbjct: 890 YLANKLGLDSEDEVELTCKGQSLVPSIPLQQVRDGIW 926
>gi|157818223|ref|NP_001100405.1| uncharacterized protein LOC302366 [Rattus norvegicus]
gi|149055522|gb|EDM07106.1| rCG38166 [Rattus norvegicus]
Length = 232
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
++C IC L DA TI+ECLHTFC+ CI E CP CNI + P LR D
Sbjct: 121 ISCSICKGYLIDAATITECLHTFCKSCIVKHF--EHSNRCPKCNIIVHEAKPHNNLRMDP 178
Query: 84 TLQDVRAKIF 93
LQ++ K+
Sbjct: 179 QLQNIVYKLV 188
>gi|395502171|ref|XP_003755457.1| PREDICTED: polycomb group RING finger protein 6 [Sarcophilus
harrisii]
Length = 229
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 11 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 68
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 69 QLQDIVYKL 77
>gi|327277423|ref|XP_003223464.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Anolis
carolinensis]
Length = 336
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQALNRLQRGK 160
>gi|170047129|ref|XP_001851087.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
gi|167869650|gb|EDS33033.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
Length = 418
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R+ +E ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RMPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP 110
>gi|28422507|gb|AAH46935.1| Rnf2-b protein [Xenopus laevis]
Length = 369
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 4/165 (2%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 60 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 116
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + L +++LSS + ++ A
Sbjct: 117 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGLKMQAM 175
Query: 134 TTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASS 178
R R + G + D SV N++ S
Sbjct: 176 HRAQRVRKHQHESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAGPS 220
>gi|431915925|gb|ELK16179.1| E3 ubiquitin-protein ligase RING2 [Pteropus alecto]
Length = 336
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 141
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 142 HSIEEGLKIQALNRLQRGK 160
>gi|357620029|gb|EHJ72363.1| putative ring finger protein 2 isoform 1 [Danaus plexippus]
Length = 377
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 8/210 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ ++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + + + SL
Sbjct: 81 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKINMSHSQASLV 136
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSV-EDNEDGASSPE 180
+ + ++ +Q R R N + SN +T+ P SV +D+ A++P
Sbjct: 137 NSITEGIKLQSQNRPQRARKN--HDDNSNASNSNNNTEPPQNGSSSSVPKDSTSSAANPT 194
Query: 181 TLNKLSQNVKPMQSSSSAQPSQPISSKEKD 210
T + + N ++S+ S PS ISS K+
Sbjct: 195 TPGQSTSNPASVRSTPSPVPSN-ISSVSKN 223
>gi|332019598|gb|EGI60076.1| Polycomb group RING finger protein 2 [Acromyrmex echinatior]
Length = 847
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ CP+C L DATT+ ECLH+FCR CI ++S CPVC++
Sbjct: 18 IVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSS-GARACPVCSV 61
>gi|119570034|gb|EAW49649.1| polycomb group ring finger 6, isoform CRA_c [Homo sapiens]
Length = 118
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GCVPLEKLRPDHTL 85
C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D L
Sbjct: 34 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDRQL 91
Query: 86 QDVRAKI 92
QD+ K+
Sbjct: 92 QDIVYKL 98
>gi|47497988|ref|NP_998872.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|171847227|gb|AAI61443.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624130|gb|AAI70688.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624607|gb|AAI71333.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
Length = 336
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 115
>gi|417399162|gb|JAA46609.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 336
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 115
>gi|74207028|dbj|BAE33300.1| unnamed protein product [Mus musculus]
Length = 406
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|90101656|sp|Q7ZWM8.2|RNG2B_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-B; AltName:
Full=RING finger protein 1B-B; Short=RING1b-B; AltName:
Full=RING finger protein 2-B
Length = 343
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 4/165 (2%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 90
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + L +++LSS + ++ A
Sbjct: 91 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGLKMQAM 149
Query: 134 TTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASS 178
R R + G + D SV N++ S
Sbjct: 150 HRAQRVRKHQHESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAGPS 194
>gi|226958428|ref|NP_033092.3| E3 ubiquitin-protein ligase RING1 [Mus musculus]
gi|92090635|sp|O35730.2|RING1_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Transcription repressor
Ring1A
gi|74192043|dbj|BAE32956.1| unnamed protein product [Mus musculus]
Length = 406
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|354487574|ref|XP_003505947.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cricetulus
griseus]
gi|344252993|gb|EGW09097.1| E3 ubiquitin-protein ligase RING1 [Cricetulus griseus]
Length = 408
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|163914471|ref|NP_001106320.1| ring finger protein 2 [Xenopus laevis]
gi|160773127|gb|AAI55052.1| LOC100127274 protein [Xenopus laevis]
gi|213625992|gb|AAI69620.1| Hypothetical protein LOC100127274 [Xenopus laevis]
gi|213626554|gb|AAI69622.1| Hypothetical protein LOC100127274 [Xenopus laevis]
Length = 336
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 115
>gi|402766203|ref|NP_997714.2| E3 ubiquitin-protein ligase RING1 [Rattus norvegicus]
gi|90110054|sp|Q6MGB6.2|RING1_RAT RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|149043381|gb|EDL96832.1| ring finger protein 1 [Rattus norvegicus]
Length = 406
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|326923721|ref|XP_003208083.1| PREDICTED: polycomb group RING finger protein 5-like [Meleagris
gallopavo]
Length = 326
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 86 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 143
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 144 TLEEIIFKLVPGLREQ 159
>gi|334323602|ref|XP_003340414.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RING1-like [Monodelphis domestica]
Length = 408
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|401409546|ref|XP_003884221.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
gi|325118639|emb|CBZ54190.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
Length = 1330
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
++CPIC + ++ + +CLH FC CI +K + CP C I + LRPD T
Sbjct: 709 LSCPICMGIFQNVVVVKDCLHRFCADCI-EKCVRTGLRECPQCRIHVAS--RRALRPDPT 765
Query: 85 LQDVRAKIFP 94
+ + K+FP
Sbjct: 766 FERILNKLFP 775
>gi|339522217|gb|AEJ84273.1| polycomb group RING finger protein 5 [Capra hircus]
Length = 235
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRKVK 101
TL+++ K P R +++
Sbjct: 74 TLEEIIFKFVPGLREQLE 91
>gi|157167823|ref|XP_001655936.1| ring finger protein [Aedes aegypti]
gi|108871414|gb|EAT35639.1| AAEL012209-PA [Aedes aegypti]
Length = 395
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP 110
>gi|21742317|emb|CAD40774.1| OSJNBb0039F02.5 [Oryza sativa Japonica Group]
gi|38347155|emb|CAE05145.2| OSJNBa0039C07.1 [Oryza sativa Japonica Group]
Length = 324
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 312 ISPQAVLDAAGAKYERRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKY 371
+ P AV AAG +WF L A+ Q LPQI SYLRIKD + V + KY
Sbjct: 228 LPPSAVAAAAG---------VWFVLQAAPLQGREPFLPQIPRSYLRIKDGRVTVRLLTKY 278
Query: 372 LMMKLDLPSESEVEIKCMGQPVIP 395
L+ KL L ESEV C+G + P
Sbjct: 279 LVNKLGLEDESEVRGVCLGWHISP 302
>gi|355709620|gb|AES03653.1| polycomb group ring finger 6 [Mustela putorius furo]
Length = 169
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 41 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 98
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 99 QLQDIVYKL 107
>gi|118793629|ref|XP_320974.3| AGAP002073-PA [Anopheles gambiae str. PEST]
gi|116115902|gb|EAA01047.3| AGAP002073-PA [Anopheles gambiae str. PEST]
Length = 423
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP 110
>gi|324507449|gb|ADY43157.1| Polycomb group RING finger protein 3 [Ascaris suum]
Length = 250
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
K+ T+ +TCPIC +ATT+ ECLHTFC+ C+ +E CCP C+ G +
Sbjct: 23 KILLRTLNPHITCPICKGYFIEATTVIECLHTFCKSCLLKHFENES-NCCPKCS---GLI 78
Query: 75 ----PLEKLRPDHTLQDVRAKIFP 94
P + D T+Q++ K+ P
Sbjct: 79 HQSHPSHYVSFDRTMQELVYKLVP 102
>gi|118151048|ref|NP_001071448.1| polycomb group RING finger protein 5 [Bos taurus]
gi|126253669|sp|A0JN86.1|PCGF5_BOVIN RecName: Full=Polycomb group RING finger protein 5
gi|117306237|gb|AAI26566.1| Polycomb group ring finger 5 [Bos taurus]
gi|296472843|tpg|DAA14958.1| TPA: polycomb group RING finger protein 5 [Bos taurus]
Length = 255
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRKVK 101
TL+++ K+ P R +++
Sbjct: 74 TLEEIIFKLVPGLREQLE 91
>gi|432089360|gb|ELK23311.1| E3 ubiquitin-protein ligase RING2 [Myotis davidii]
Length = 397
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 87 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 146
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + +++LS
Sbjct: 147 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALS 202
Query: 122 SLVVSAPRVSAQTTMTRRR 140
+ ++ A + R +
Sbjct: 203 HSIEEGLKIQAMNRLQRGK 221
>gi|395533944|ref|XP_003769009.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Sarcophilus harrisii]
Length = 481
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 96 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 155
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 156 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 211
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 212 SSIEEGLRMQAMHRAQRVR 230
>gi|219518728|gb|AAI45592.1| Pcgf5 protein [Mus musculus]
Length = 255
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRKVK 101
TL+++ K+ P R +++
Sbjct: 74 TLEEIIFKLVPGLREQLQ 91
>gi|12832332|dbj|BAB22061.1| unnamed protein product [Mus musculus]
Length = 233
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|307189311|gb|EFN73742.1| Polycomb complex protein BMI-1-B [Camponotus floridanus]
Length = 371
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ CP+C L DATT+ ECLH+FCR CI ++S CPVCN+
Sbjct: 148 IVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGA-RACPVCNV 191
>gi|354473588|ref|XP_003499016.1| PREDICTED: polycomb group RING finger protein 5-like [Cricetulus
griseus]
Length = 329
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|335295881|ref|XP_003357628.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 2 [Sus
scrofa]
Length = 347
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 37 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 96
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 97 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 126
>gi|149730354|ref|XP_001493775.1| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 258
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSSD--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|21313116|ref|NP_083784.1| polycomb group RING finger protein 5 [Mus musculus]
gi|12857499|dbj|BAB31023.1| unnamed protein product [Mus musculus]
gi|187954253|gb|AAI39259.1| Polycomb group ring finger 5 [Mus musculus]
gi|223461108|gb|AAI39260.1| Polycomb group ring finger 5 [Mus musculus]
Length = 236
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|311264978|ref|XP_003130427.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 1 [Sus
scrofa]
Length = 336
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 115
>gi|148709823|gb|EDL41769.1| polycomb group ring finger 5, isoform CRA_b [Mus musculus]
Length = 238
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 18 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 75
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 76 TLEEIIFKLVPGLREQ 91
>gi|417397603|gb|JAA45835.1| Putative polycomb group ring finger protein 5 [Desmodus rotundus]
Length = 236
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|296197865|ref|XP_002746470.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Callithrix
jacchus]
Length = 406
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|193788616|ref|NP_001123354.1| polycomb group RING finger protein 5 [Rattus norvegicus]
gi|187469199|gb|AAI67067.1| Pcgf5 protein [Rattus norvegicus]
Length = 236
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|296474544|tpg|DAA16659.1| TPA: ring finger protein 1 [Bos taurus]
Length = 382
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|426250134|ref|XP_004018793.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Ovis aries]
Length = 392
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|443728540|gb|ELU14840.1| hypothetical protein CAPTEDRAFT_128199 [Capitella teleta]
Length = 205
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C L +AT I ECLH+FCR CI ++ + CPVC++ + P +RPD
Sbjct: 20 LICVLCRGYLVEATAIVECLHSFCRSCIVRNLATSKY--CPVCDVAITTAKPSLCIRPDE 77
Query: 84 TLQDVRAKIFP------LKRRK 99
LQ + KI P LKRRK
Sbjct: 78 ILQRLVYKIVPNLFEDELKRRK 99
>gi|351703542|gb|EHB06461.1| E3 ubiquitin-protein ligase RING1 [Heterocephalus glaber]
Length = 376
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|50749508|ref|XP_421668.1| PREDICTED: polycomb group RING finger protein 5 [Gallus gallus]
Length = 256
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|403261548|ref|XP_003923180.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|380807723|gb|AFE75737.1| polycomb group RING finger protein 6 isoform a, partial [Macaca
mulatta]
Length = 98
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GCVPLEKLRPDHTL 85
C IC L DATTI+ECLHTFC+ CI CP CNI + PL +R D L
Sbjct: 35 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDRQL 92
Query: 86 QDVRAK 91
QD+ K
Sbjct: 93 QDIVYK 98
>gi|157280011|ref|NP_001098521.1| E3 ubiquitin-protein ligase RING1 [Bos taurus]
gi|154426104|gb|AAI51292.1| RING1 protein [Bos taurus]
Length = 407
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|417400362|gb|JAA47134.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|410958904|ref|XP_003986053.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Felis catus]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|348576400|ref|XP_003473975.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cavia porcellus]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|312075572|ref|XP_003140476.1| posterior sex combs protein [Loa loa]
gi|307764356|gb|EFO23590.1| posterior sex combs protein [Loa loa]
Length = 750
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C + L DA T++ECLH++CR C+ I E+ C C G E D T
Sbjct: 13 LCCSLCKSYLIDAVTLTECLHSYCRACLLGNIEKAEVYHCTKCAASFGRDLSEAFVRDDT 72
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 73 LQKLVYKMVP 82
>gi|51479192|ref|NP_002922.2| E3 ubiquitin-protein ligase RING1 [Homo sapiens]
gi|90110053|sp|Q06587.2|RING1_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Really interesting new
gene 1 protein
gi|30354168|gb|AAH51866.1| Ring finger protein 1 [Homo sapiens]
gi|33877354|gb|AAH02922.2| Ring finger protein 1 [Homo sapiens]
gi|66347232|emb|CAI95620.1| ring finger protein 1 [Homo sapiens]
gi|158259733|dbj|BAF82044.1| unnamed protein product [Homo sapiens]
gi|208967344|dbj|BAG73686.1| ring finger protein 1 [synthetic construct]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|397474342|ref|XP_003808641.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1
[Pan paniscus]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|395832135|ref|XP_003789131.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Otolemur garnettii]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|380793389|gb|AFE68570.1| E3 ubiquitin-protein ligase RING1, partial [Macaca mulatta]
Length = 213
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|355709615|gb|AES03651.1| polycomb group ring finger 5 [Mustela putorius furo]
Length = 108
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGCVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C N PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|355561586|gb|EHH18218.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|332245586|ref|XP_003271939.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Nomascus
leucogenys]
gi|402866635|ref|XP_003897484.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Papio anubis]
gi|426352705|ref|XP_004043850.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Gorilla gorilla
gorilla]
gi|387542564|gb|AFJ71909.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|410207298|gb|JAA00868.1| ring finger protein 1 [Pan troglodytes]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|114326401|ref|NP_001041593.1| E3 ubiquitin-protein ligase RING1 [Canis lupus familiaris]
gi|90110052|sp|Q5TJF3.2|RING1_CANFA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=RING1a
gi|55956947|emb|CAI11434.1| ring finger protein 1 [Canis lupus familiaris]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|297661281|ref|XP_002809193.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Pongo
abelii]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|281338470|gb|EFB14054.1| hypothetical protein PANDA_002277 [Ailuropoda melanoleuca]
Length = 404
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|432094621|gb|ELK26127.1| E3 ubiquitin-protein ligase RING1 [Myotis davidii]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|431916878|gb|ELK16638.1| E3 ubiquitin-protein ligase RING1 [Pteropus alecto]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|301757099|ref|XP_002914380.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Ailuropoda
melanoleuca]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|194223403|ref|XP_001493432.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Equus caballus]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|298160989|ref|NP_001177164.1| E3 ubiquitin-protein ligase RING1 [Sus scrofa]
gi|147223291|emb|CAN13293.1| ring finger protein 1 [Sus scrofa]
Length = 406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|157128543|ref|XP_001661477.1| ring finger protein [Aedes aegypti]
gi|108872542|gb|EAT36767.1| AAEL011179-PA [Aedes aegypti]
Length = 276
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGCVPLEKLRPDH 83
+TC +CN L +ATTI++CLHTFCR CI + + CP C + + + + LRPD
Sbjct: 47 ITCSLCNGYLIEATTINDCLHTFCRSCIVRHLEGNKY--CPKCKSYNNKTITVANLRPDR 104
Query: 84 TLQDVRAKIFPLKRR 98
L+ + K+ P R
Sbjct: 105 ILRSLVYKLVPGLHR 119
>gi|326923903|ref|XP_003208172.1| PREDICTED: polycomb group RING finger protein 6-like [Meleagris
gallopavo]
Length = 243
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC DATTI+ECLHTFC+ CI CP CNI + PL +R D
Sbjct: 25 ILCSICKGYFIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 82
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 83 QLQDIVYKL 91
>gi|312376122|gb|EFR23307.1| hypothetical protein AND_13125 [Anopheles darlingi]
Length = 449
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RAPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP 110
>gi|403259945|ref|XP_003922452.1| PREDICTED: polycomb group RING finger protein 5 isoform 1
[Saimiri boliviensis boliviensis]
gi|403259947|ref|XP_003922453.1| PREDICTED: polycomb group RING finger protein 5 isoform 2
[Saimiri boliviensis boliviensis]
Length = 253
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|344298828|ref|XP_003421093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Loxodonta
africana]
Length = 406
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|348553186|ref|XP_003462408.1| PREDICTED: polycomb group RING finger protein 5-like [Cavia
porcellus]
Length = 255
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|291404424|ref|XP_002718426.1| PREDICTED: polycomb group ring finger 5 [Oryctolagus cuniculus]
Length = 278
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|126272969|ref|XP_001367374.1| PREDICTED: polycomb group RING finger protein 5-like [Monodelphis
domestica]
Length = 255
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|296220747|ref|XP_002756439.1| PREDICTED: polycomb group RING finger protein 5 isoform 2
[Callithrix jacchus]
Length = 253
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|291229732|ref|XP_002734826.1| PREDICTED: ring finger protein 2-like [Saccoglossus kowalevskii]
Length = 300
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ + V ++ + + CPIC +L++ T ECLH FC++CI +
Sbjct: 27 RTPQEAITDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCQECITTALRSGNK 86
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L +++L
Sbjct: 87 E-CPTCRKKL--VSRRSLRPDPNFDALISKIYP-SRDEYEAQQEKLLARLNQHHNQQALQ 142
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDK 160
+ + ++ A R R + + + GSN D+
Sbjct: 143 NSIEEGLKLQAMNRAQRVRKHQSEEH---IVGSNNHIDE 178
>gi|351710204|gb|EHB13123.1| Polycomb group RING finger protein 5 [Heterocephalus glaber]
Length = 255
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|301763803|ref|XP_002917339.1| PREDICTED: polycomb group RING finger protein 5-like [Ailuropoda
melanoleuca]
gi|410975675|ref|XP_003994256.1| PREDICTED: polycomb group RING finger protein 5 [Felis catus]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|339522219|gb|AEJ84274.1| polycomb group RING finger protein 5 [Capra hircus]
Length = 236
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K P R +
Sbjct: 74 TLEEIIFKFVPGLREQ 89
>gi|281338533|gb|EFB14117.1| hypothetical protein PANDA_005532 [Ailuropoda melanoleuca]
Length = 224
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|114631765|ref|XP_001144756.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Pan
troglodytes]
gi|332834619|ref|XP_003312724.1| PREDICTED: polycomb group RING finger protein 5 [Pan troglodytes]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|440897766|gb|ELR49390.1| Polycomb group RING finger protein 5 [Bos grunniens mutus]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|440791566|gb|ELR12804.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 561
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+TCPIC ++R T+ ECLH FC +CI + + E CP C + C LRPD
Sbjct: 128 LTCPICLGIMRQTMTVMECLHRFCDECISKCLRWGKKE-CPTCRVH--CSSRRHLRPDPN 184
Query: 85 LQDVRAKIFP 94
+ A ++P
Sbjct: 185 FDALIATVYP 194
>gi|426252775|ref|XP_004020078.1| PREDICTED: polycomb group RING finger protein 5 [Ovis aries]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|391326829|ref|XP_003737913.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Metaseiulus
occidentalis]
Length = 336
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V + ++ + + CPIC +L+ T ECLH FC+ CI +
Sbjct: 22 RTPQEVCTDSTEIAVSQRSLHSELMCPICLDILKTTMTTKECLHRFCQDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + AKI+P
Sbjct: 82 E-CPTCRKKL--VSKRSLRADPNFDALIAKIYP 111
>gi|350425025|ref|XP_003493989.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Bombus
impatiens]
Length = 380
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNA 143
+ + ++ +Q R R NA
Sbjct: 138 NSITEGIKLQSQNRSQRSRKNA 159
>gi|354506347|ref|XP_003515225.1| PREDICTED: polycomb group RING finger protein 6-like [Cricetulus
griseus]
Length = 260
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC L DATTI+ECLHTFC+ CI CP C+I + PL +R D
Sbjct: 42 IMCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCSIVVHQTQPLYNIRLDR 99
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 100 QLQDIVYKL 108
>gi|402880924|ref|XP_003904036.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Papio
anubis]
gi|402880926|ref|XP_003904037.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Papio
anubis]
gi|355782955|gb|EHH64876.1| hypothetical protein EGM_18205 [Macaca fascicularis]
gi|380784417|gb|AFE64084.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784419|gb|AFE64085.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784421|gb|AFE64086.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784423|gb|AFE64087.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|383413563|gb|AFH29995.1| polycomb group RING finger protein 5 [Macaca mulatta]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|335773371|gb|AEH58370.1| polycomb group RING finger protein 5-like protein [Equus
caballus]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|383865665|ref|XP_003708293.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Megachile
rotundata]
Length = 368
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R ++ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L + +L
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVLAKLNKSHSQAALV 137
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAA 149
+ + ++ +Q R R N A+
Sbjct: 138 NSITEGIKLQSQNRPQRSRKNVEPENAS 165
>gi|390335932|ref|XP_788976.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 303
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ + V ++ + + CPIC +L++ T ECLH FC+ CI +
Sbjct: 22 RSPQEAITDETEIAVSPRSLHSELMCPICLDMLKNTYTTKECLHRFCQDCIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + L R +LS
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVMAKLNKRHNTAALS 137
Query: 122 SLVVSAPRVSA 132
+ + +V A
Sbjct: 138 TSIEEGLKVQA 148
>gi|344274969|ref|XP_003409287.1| PREDICTED: polycomb group RING finger protein 5-like [Loxodonta
africana]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|242019424|ref|XP_002430161.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
gi|212515252|gb|EEB17423.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
Length = 352
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 24 RTPQEAITDHTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNK 83
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + + +L
Sbjct: 84 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP-SRDEYEAHQERVMAKINKSHSQAALV 139
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALR------GSNLSTD--KPPKKEEDSVEDNE 173
S + ++ +Q R+ A +L NLST+ +PP +E+
Sbjct: 140 SSITEGIKLQSQNRPNRKNKIGDADSVDSLSSQPSAANQNLSTNSVQPPTSTSFGLENQT 199
Query: 174 DG 175
G
Sbjct: 200 SG 201
>gi|149757062|ref|XP_001496466.1| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|449282985|gb|EMC89699.1| Polycomb group RING finger protein 5 [Columba livia]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|33300663|ref|NP_115749.2| polycomb group RING finger protein 5 [Homo sapiens]
gi|375065846|ref|NP_001243478.1| polycomb group RING finger protein 5 [Homo sapiens]
gi|380036033|ref|NP_001244030.1| polycomb group RING finger protein 5 [Homo sapiens]
gi|297686995|ref|XP_002821014.1| PREDICTED: polycomb group RING finger protein 5 [Pongo abelii]
gi|332212309|ref|XP_003255263.1| PREDICTED: polycomb group RING finger protein 5 isoform 2
[Nomascus leucogenys]
gi|426365544|ref|XP_004049831.1| PREDICTED: polycomb group RING finger protein 5 isoform 1
[Gorilla gorilla gorilla]
gi|426365546|ref|XP_004049832.1| PREDICTED: polycomb group RING finger protein 5 isoform 2
[Gorilla gorilla gorilla]
gi|441600613|ref|XP_004087624.1| PREDICTED: polycomb group RING finger protein 5 [Nomascus
leucogenys]
gi|74750353|sp|Q86SE9.1|PCGF5_HUMAN RecName: Full=Polycomb group RING finger protein 5; AltName:
Full=RING finger protein 159
gi|30353997|gb|AAH51845.1| PCGF5 protein [Homo sapiens]
gi|30722356|emb|CAD91165.1| hypothetical protein [Homo sapiens]
gi|117646070|emb|CAL38502.1| hypothetical protein [synthetic construct]
gi|119570497|gb|EAW50112.1| polycomb group ring finger 5, isoform CRA_a [Homo sapiens]
gi|119570498|gb|EAW50113.1| polycomb group ring finger 5, isoform CRA_a [Homo sapiens]
gi|221044402|dbj|BAH13878.1| unnamed protein product [Homo sapiens]
gi|261859692|dbj|BAI46368.1| polycomb group ring finger 5 [synthetic construct]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|332372788|gb|AEE61536.1| unknown [Dendroctonus ponderosae]
Length = 382
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ ++N + V ++ + + CPIC +L+ T ECLH FC +CI +
Sbjct: 22 RTPQEVITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSECIITALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + AKI+P
Sbjct: 82 E-CPTCRKKL--VSKRSLRADPNFDLLIAKIYP 111
>gi|224052561|ref|XP_002188526.1| PREDICTED: polycomb group RING finger protein 5 [Taeniopygia
guttata]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|397510020|ref|XP_003825403.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Pan
paniscus]
gi|397510022|ref|XP_003825404.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Pan
paniscus]
gi|410226392|gb|JAA10415.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258158|gb|JAA17046.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258160|gb|JAA17047.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258162|gb|JAA17048.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258164|gb|JAA17049.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258166|gb|JAA17050.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258168|gb|JAA17051.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410304080|gb|JAA30640.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410338739|gb|JAA38316.1| polycomb group ring finger 5 [Pan troglodytes]
Length = 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|417397932|gb|JAA45999.1| Putative polycomb group ring finger protein 5 [Desmodus rotundus]
Length = 256
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|311271618|ref|XP_003133191.1| PREDICTED: polycomb group RING finger protein 5-like [Sus scrofa]
Length = 256
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|31126761|gb|AAP44681.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 163
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 17 KRETIAACMTCPICNTLLRDATTISECLHT 46
+R ++AAC+TCP+C LLRDATTISECLHT
Sbjct: 24 RRASVAACLTCPLCGRLLRDATTISECLHT 53
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 337 VASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVE 385
+ + +RG LPQ+ + YLRIKD ++P S IQKYL KL+L SE+E+
Sbjct: 83 ICTFARRGVPTLPQLPAKYLRIKDVDLPASIIQKYLAQKLNLSSETELH 131
>gi|123794666|sp|Q3UK78.1|PCGF5_MOUSE RecName: Full=Polycomb group RING finger protein 5; AltName:
Full=RING finger protein 159
gi|74222234|dbj|BAE26924.1| unnamed protein product [Mus musculus]
gi|219519442|gb|AAI45591.1| Pcgf5 protein [Mus musculus]
Length = 256
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|148682085|gb|EDL14032.1| mCG1030969 [Mus musculus]
Length = 257
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
++C IC L DA TI+ECLHTFC+ CI E CP CNI + P + LR D
Sbjct: 146 ISCFICKGYLIDAATITECLHTFCKSCIVKHF--EHSNRCPKCNIIVHQAKPHKNLRMDP 203
Query: 84 TLQDVRAKI 92
LQ + K+
Sbjct: 204 QLQSIVYKL 212
>gi|91089673|ref|XP_974409.1| PREDICTED: similar to ring finger protein [Tribolium castaneum]
gi|270011332|gb|EFA07780.1| hypothetical protein TcasGA2_TC005337 [Tribolium castaneum]
Length = 214
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GC 73
K+K +++ +TC IC L DAT I+ECLHTFC+ C+ + E CP C++ +
Sbjct: 4 KIKLKSLNPYITCNICKGYLIDATAITECLHTFCKSCLIKHL--EANTNCPTCDMVIHHS 61
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
P + + D T+QD+ K+ P
Sbjct: 62 YPRQYINFDRTMQDIVYKLVP 82
>gi|344244641|gb|EGW00745.1| Polycomb group RING finger protein 5 [Cricetulus griseus]
Length = 256
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|443728546|gb|ELU14846.1| hypothetical protein CAPTEDRAFT_128203 [Capitella teleta]
Length = 268
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC +C L DA+TI +CLH+FCR C+ ++ CPVC + L PL +R D
Sbjct: 59 VTCRLCKGYLIDASTIQKCLHSFCRSCLVRFLASNHA--CPVCGVLLNRSEPLLNVRLDR 116
Query: 84 TLQDVRAKIFP 94
TLQ++ K+ P
Sbjct: 117 TLQNLVYKLVP 127
>gi|395820790|ref|XP_003783743.1| PREDICTED: polycomb group RING finger protein 5 [Otolemur
garnettii]
Length = 256
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R +
Sbjct: 74 TLEEIIFKLVPGLREQ 89
>gi|341884152|gb|EGT40087.1| hypothetical protein CAEBREN_01001 [Caenorhabditis brenneri]
Length = 561
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL- 71
VK E + +TC IC+ + DATTI +C+HTFC+ C+ D + CP C +
Sbjct: 327 TVKYNMEVLNPFITCSICDGYIVDATTIIDCMHTFCKSCLLSYF-DNDNRTCPTCGTFIH 385
Query: 72 GCVPLEKLRPDHTLQDVRAKIFP 94
G P + D + ++ + P
Sbjct: 386 GSHPTHYVTYDRAVNELVNQFVP 408
>gi|390348740|ref|XP_792718.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 269
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ + V ++ + + CPIC +L++ T ECLH FC+ CI +
Sbjct: 25 RSPQEAITDETEIAVSPRSLHSELMCPICLDMLKNTYTTKECLHRFCQDCIITALRSGNK 84
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 85 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 114
>gi|38086587|ref|XP_142049.3| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
gi|83002894|ref|XP_913741.1| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
Length = 230
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
++C IC L DA TI+ECLHTFC+ CI E CP CNI + P + LR D
Sbjct: 119 ISCFICKGYLIDAATITECLHTFCKSCIVKHF--EHSNRCPKCNIIVHQAKPHKNLRMDP 176
Query: 84 TLQDVRAKI 92
LQ + K+
Sbjct: 177 QLQSIVYKL 185
>gi|170589936|ref|XP_001899729.1| Posterior Sex Combs gene. [Brugia malayi]
gi|158592855|gb|EDP31451.1| Posterior Sex Combs gene., putative [Brugia malayi]
Length = 748
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C + L DA T++ECLH++CR C+ + I E+ C C G + D T
Sbjct: 13 LCCSLCKSYLIDAVTLTECLHSYCRACLLNNIEKTEVYHCTKCAASFGRDLSDAFVRDDT 72
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 73 LQKLVYKMVP 82
>gi|348578003|ref|XP_003474773.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Cavia porcellus]
Length = 291
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 26 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 85
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 86 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 115
>gi|392343333|ref|XP_003754856.1| PREDICTED: polycomb group RING finger protein 6-like [Rattus
norvegicus]
Length = 144
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKL 79
+A ++C IC L DAT I+ECLHTFC+ CI E CP CNI + P L
Sbjct: 29 LAPFISCSICKGYLIDATAITECLHTFCKSCIVKHF--EHSNRCPKCNIIVHDAKPHNNL 86
Query: 80 RPDHTLQDVRAKI 92
R D LQ++ K+
Sbjct: 87 RMDPQLQNIVYKL 99
>gi|2239144|emb|CAA73381.1| transcription repressor Ring1A [Mus musculus]
gi|3811385|gb|AAC69901.1| RING1 [Mus musculus]
gi|148678290|gb|EDL10237.1| mCG23002 [Mus musculus]
Length = 377
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 62
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 134 TTMTRRR 140
R R
Sbjct: 122 HRAQRVR 128
>gi|341893341|gb|EGT49276.1| hypothetical protein CAEBREN_01245 [Caenorhabditis brenneri]
Length = 562
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-G 72
VK E + +TC IC+ + DATTI +C+HTFC+ C+ D + CP C + G
Sbjct: 329 VKYNMEVLNPFITCSICDGYIVDATTIIDCMHTFCKSCLLSYF-DNDNRTCPTCGTFIHG 387
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
P + D + ++ + P
Sbjct: 388 SHPTHYVTYDRAVNELVNQFVP 409
>gi|156551976|ref|XP_001602601.1| PREDICTED: hypothetical protein LOC100118694 [Nasonia
vitripennis]
Length = 761
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN 68
+ CP+C L DATT+ ECLH+FCR CI ++ + + CPVC+
Sbjct: 29 IVCPLCRGYLIDATTLVECLHSFCRGCILRRLHNGP-KTCPVCS 71
>gi|194754545|ref|XP_001959555.1| GF11991 [Drosophila ananassae]
gi|190620853|gb|EDV36377.1| GF11991 [Drosophila ananassae]
Length = 1606
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L DATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 243 IICHLCTGYLVDATTIVECLHSFCHSCLINHLRKERF--CPRCKMVINSA-KPNIKSDTT 299
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 300 LQAIVYKLVP 309
>gi|46237549|emb|CAE83930.1| ring finger protein 1 [Rattus norvegicus]
gi|133777213|gb|AAH98635.2| Ring finger protein 1 [Rattus norvegicus]
gi|336454745|dbj|BAK40272.1| ring finger protein 1 [Rattus norvegicus]
Length = 377
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 62
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 134 TTMTRRR 140
R R
Sbjct: 122 HRAQRVR 128
>gi|194375029|dbj|BAG62627.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P R + +A + + L +++LS
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALS 138
Query: 122 SLVVSAPRVSAQTTMTRRR 140
S + R+ A R R
Sbjct: 139 SSIEEGLRMQAMHRAQRVR 157
>gi|444729120|gb|ELW69548.1| E3 ubiquitin-protein ligase RING1 [Tupaia chinensis]
Length = 403
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 62
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 134 TTMTRRR 140
R R
Sbjct: 122 HRAQRVR 128
>gi|402593600|gb|EJW87527.1| hypothetical protein WUBG_01563 [Wuchereria bancrofti]
Length = 186
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
K+ +T+ +TCP+C +ATT+++CLHTFC+ C+ + CCP C N+
Sbjct: 13 KILLKTLNPHITCPLCKGYFIEATTVTDCLHTFCKSCLLKHFENVN-NCCPKCSNLIHQS 71
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
P + D T+Q++ K+ P
Sbjct: 72 HPSHYVSFDRTMQELVYKLVP 92
>gi|344278451|ref|XP_003411007.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Loxodonta
africana]
Length = 384
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 6 EMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCP 65
E ++ L + V ++ + + CPIC +L++ T ECLH FC CI + E CP
Sbjct: 78 EAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKE-CP 136
Query: 66 VCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVV 125
C L V LRPD + +KI+P R + +A + + +++LS +
Sbjct: 137 TCRKKL--VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALSHSIE 193
Query: 126 SAPRVSAQTTMTRRR 140
++ A + R +
Sbjct: 194 EGLKIQAMNRLQRGK 208
>gi|403365953|gb|EJY82767.1| hypothetical protein OXYTRI_19617 [Oxytricha trifallax]
Length = 284
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKIS-DEEIECCPVCNIDLGCV 74
V R T +TC +C L R+A T++EC+ TFC+ C ++ S E CP C ++
Sbjct: 11 VPRSTFVKDLTCFLCKGLYREAHTLNECMCTFCKICAFEYFSVKENSRKCPKCCQEIRGR 70
Query: 75 PLEKLRPDHTLQDVRAKIFP-LKRRK 99
E++ D+T+Q V IFP K+R+
Sbjct: 71 VFEQIVKDNTMQTVTDLIFPEFKQRE 96
>gi|109157342|pdb|2CKL|B Chain B, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 165
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 32 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 91
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 92 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 121
>gi|149062761|gb|EDM13184.1| rCG48011 [Rattus norvegicus]
Length = 203
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKRRK 99
TL+++ K+ P R
Sbjct: 74 TLEEIIFKLVPGLREH 89
>gi|125490343|ref|NP_001074951.1| E3 ubiquitin-protein ligase RING1 [Pan troglodytes]
gi|169234988|ref|NP_001108431.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|73914062|sp|Q8WMN5.1|RING1_MACMU RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325684|sp|A1YFY1.1|RING1_PANPA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325685|sp|A2T6X5.1|RING1_PANTR RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|17826764|emb|CAD18905.1| ring finger protein 1 [Macaca mulatta]
gi|121483824|gb|ABM54206.1| RING1 [Pan paniscus]
gi|124111107|gb|ABM91930.1| RING1 [Pan troglodytes]
Length = 377
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 62
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 134 TTMTRRR 140
R R
Sbjct: 122 HRAQRVR 128
>gi|146325683|sp|A1YER5.1|RING1_GORGO RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|120974081|gb|ABM46633.1| RING1 [Gorilla gorilla]
Length = 377
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 62
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 134 TTMTRRR 140
R R
Sbjct: 122 HRAQRVR 128
>gi|296064|emb|CAA78389.1| RING1 [Homo sapiens]
gi|3820982|emb|CAA20235.1| ring finger protein 1 [Homo sapiens]
gi|30583543|gb|AAP36016.1| ring finger protein 1 [Homo sapiens]
gi|60655933|gb|AAX32530.1| ring finger protein 1 [synthetic construct]
gi|60655935|gb|AAX32531.1| ring finger protein 1 [synthetic construct]
gi|119624088|gb|EAX03683.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|119624089|gb|EAX03684.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|123989503|gb|ABM83883.1| ring finger protein 1 [synthetic construct]
gi|123999249|gb|ABM87203.1| ring finger protein 1 [synthetic construct]
Length = 377
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 62
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 134 TTMTRRR 140
R R
Sbjct: 122 HRAQRVR 128
>gi|312096492|ref|XP_003148686.1| hypothetical protein LOAG_13128 [Loa loa]
gi|307756150|gb|EFO15384.1| hypothetical protein LOAG_13128 [Loa loa]
Length = 244
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC-NIDLGC 73
K+ +T+ +TCP+C +ATT+++CLHTFC+ C+ + CCP C N+
Sbjct: 13 KILLKTLNPHITCPLCKGYFVEATTVTDCLHTFCKSCLLKHFENVN-NCCPKCSNLIHQS 71
Query: 74 VPLEKLRPDHTLQDVRAKIFP 94
P + D T+Q++ K+ P
Sbjct: 72 HPSHYVSFDRTMQELVYKLVP 92
>gi|440909609|gb|ELR59498.1| hypothetical protein M91_02566, partial [Bos grunniens mutus]
Length = 379
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 59 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 115
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 116 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 174
Query: 134 TTMTRRR 140
R R
Sbjct: 175 HRAQRVR 181
>gi|55956948|emb|CAI11435.1| ring finger protein 1 [Canis lupus familiaris]
Length = 377
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 62
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 134 TTMTRRR 140
R R
Sbjct: 122 HRAQRVR 128
>gi|355716581|gb|AES05657.1| ring finger protein 1 [Mustela putorius furo]
Length = 348
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH FC CI + E CP C L
Sbjct: 10 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 66
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 67 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 125
Query: 134 TTMTRRR 140
R R
Sbjct: 126 HRAQRVR 132
>gi|354497382|ref|XP_003510799.1| PREDICTED: polycomb group RING finger protein 6-like [Cricetulus
griseus]
gi|344247413|gb|EGW03517.1| Polycomb group RING finger protein 6 [Cricetulus griseus]
Length = 213
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
++C IC L DATTI+ECLH+FC+ CI CP C+I + P KLR D
Sbjct: 102 ISCSICKGYLIDATTITECLHSFCKSCIVKHFDHSNR--CPKCSIVVHQSRPHSKLRLDP 159
Query: 84 TLQDVRAKIF 93
LQ++ K+
Sbjct: 160 HLQNIVYKVV 169
>gi|324518232|gb|ADY47043.1| Polycomb group RING finger protein 3 [Ascaris suum]
Length = 151
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
K+ T+ +TCPIC +ATT+ ECLHTFC+ C+ +E CCP C+ G +
Sbjct: 23 KILLRTLNPHITCPICKGYFIEATTVIECLHTFCKSCLLKHFENES-NCCPKCS---GLI 78
Query: 75 ----PLEKLRPDHTLQDVRAKIFP 94
P + D T+Q++ K+ P
Sbjct: 79 HQSHPSHYVSFDRTMQELVYKLVP 102
>gi|357502725|ref|XP_003621651.1| hypothetical protein MTR_7g021270 [Medicago truncatula]
gi|355496666|gb|AES77869.1| hypothetical protein MTR_7g021270 [Medicago truncatula]
Length = 366
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%)
Query: 327 RRNGPIWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEV 384
R + IWF L AS++Q LPQI +YLRIKD + V + KYL+ KL L SESEV
Sbjct: 304 RPHSGIWFMLQASQNQLKEPFLPQIPKNYLRIKDGRMTVRLLFKYLVSKLKLESESEV 361
>gi|339243901|ref|XP_003377876.1| ATPase, AAA family [Trichinella spiralis]
gi|316973259|gb|EFV56879.1| ATPase, AAA family [Trichinella spiralis]
Length = 1151
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHTLQ 86
CPIC +L++ T ECLH FC+ CI + E CP C L V LRPD
Sbjct: 56 CPICLDMLKNTMTTKECLHRFCQDCITTALRSGNKE-CPTCRCKL--VSKRSLRPDPNFD 112
Query: 87 DVRAKIFPLKRRKVKAPEA 105
+ KI+P R + A EA
Sbjct: 113 GIITKIYP-SREEYDAMEA 130
>gi|328707142|ref|XP_001949156.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RSPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP 111
>gi|148709822|gb|EDL41768.1| polycomb group ring finger 5, isoform CRA_a [Mus musculus]
Length = 206
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQVHETNPLEMLRLDN 73
Query: 84 TLQDVRAKIFPLKR 97
TL+++ K+ P R
Sbjct: 74 TLEEIIFKLVPGLR 87
>gi|48475210|gb|AAT44279.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 823
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ VK I + CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 100 FILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH-- 156
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C LR D + ++P + + +A S+ RR+ +L S + +
Sbjct: 157 CASRRSLRDDPNYDALILALYPDIDKYEEEIQA--SIAETFRRQSEALVK-KRSVAKATG 213
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTD--KPPKKEEDSVEDNEDGASSPETLNKLSQNVK 190
T R R N A++ RG S D ++ED E+ +G+ +++ S +V+
Sbjct: 214 STITRRTRGNMRAKR----RGRTSSPDIVATDNEDEDRDENGNEGSKESSSVDDRSPDVR 269
Query: 191 -------PMQSSSSAQPSQPISSKEKDND 212
P+ SS A+ I S +D D
Sbjct: 270 QKRVRRWPVPRSSPAKSIGGIDSSFEDID 298
>gi|327267492|ref|XP_003218535.1| PREDICTED: polycomb group RING finger protein 6-like [Anolis
carolinensis]
Length = 228
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C IC DATTI+ECLHTFC+ C+ CP CNI + PL +R D
Sbjct: 11 IMCSICKGYFIDATTITECLHTFCKSCLVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDR 68
Query: 84 TLQDVRAKI 92
LQD+ K+
Sbjct: 69 QLQDIVYKL 77
>gi|322794453|gb|EFZ17525.1| hypothetical protein SINV_11876 [Solenopsis invicta]
Length = 1378
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L DATT+ ECLH+FCR CI +S CP C + ++ D T
Sbjct: 14 LICLLCRGYLIDATTVVECLHSFCRSCILKYLS--TAAHCPSCKHAINKAK-PNIKADKT 70
Query: 85 LQDVRAKIFP-------LKRRKVKA-PE 104
LQ++ K+ P LKR+ + A PE
Sbjct: 71 LQEIVYKLVPGLYHKEMLKRKVISATPE 98
>gi|343781184|pdb|3RPG|C Chain C, Bmi1RING1B-Ubch5c Complex Structure
Length = 121
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 31 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 90
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 91 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 120
>gi|406694144|gb|EKC97478.1| mRNA polyadenylation-related protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 519
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 20 TIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
T+ A +TCP+C LR+AT C FC +CI + D + E CP C + L+KL
Sbjct: 234 TLDAELTCPLCKKALREATRTPCCDTAFCEECIQTYLVDHDFE-CPQCESKI--TSLDKL 290
Query: 80 RPDHTLQD 87
+PD L+D
Sbjct: 291 QPDQDLRD 298
>gi|301101684|ref|XP_002899930.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102505|gb|EEY60557.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 388
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEK-L 79
+ A +TCPIC ++++ + ECLH FC +CI I E CP C I +P ++ L
Sbjct: 71 LNADLTCPICLGIIKETMVVMECLHRFCGECISTAIRHSNRE-CPSCRIH---IPSKRSL 126
Query: 80 RPDHTLQDVRAKIFP----LKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQT- 134
RPD + KI P +R + + E V + R + + R+ +
Sbjct: 127 RPDANFDALIRKIHPNLAEFERNEDQIIEKV--------NRTRHFHNAYTESARMGVLSQ 178
Query: 135 TMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPET 181
TRR A + S +T PP E+ D+ DG S +T
Sbjct: 179 AATRRNGRKKTEGATSASSSPTNTPSPPVGEK---RDSPDGGSPNDT 222
>gi|237834067|ref|XP_002366331.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211963995|gb|EEA99190.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
Length = 1440
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
++CPIC + ++ + +CLH FC CI +K + CP C I + LRPD
Sbjct: 648 LSCPICMGIFQNVVVVKDCLHRFCADCI-EKCVRTGLRECPQCRIHVAS--RRALRPDPI 704
Query: 85 LQDVRAKIFP 94
+ + K+FP
Sbjct: 705 FERILNKLFP 714
>gi|345316757|ref|XP_001506883.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ornithorhynchus
anatinus]
Length = 160
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CPIC +L++ T ECLH FC CI + E CP C L V LRPD
Sbjct: 54 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRPDPN 110
Query: 85 LQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
+ +KI+P R + +A + V L +++LSS + R+ A
Sbjct: 111 FDALISKIYP-SREEYEAHQDRVLVRLSRLHNQQALSSSIEEGLRMQA 157
>gi|327290713|ref|XP_003230066.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Anolis
carolinensis]
Length = 331
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 23 RTPQEALMDGTEIAVSPRSLHSELMCPICLDMLKHTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 83 E-CPTCRKKL--VSKRSLRPDPNFDALISKIYP 112
>gi|444722999|gb|ELW63671.1| Polycomb group RING finger protein 2 [Tupaia chinensis]
Length = 102
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL-GC 73
++K + + C +C DATT ECLH+FC+ CI + E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGNFIDATTTVECLHSFCKTCIARYL--ETNKYCPMCDVQVHKT 63
Query: 74 VPLEKLRPDHTLQDVRAKIFP------LKRRKV 100
PL +R D TL+++ K+ P +KRR++
Sbjct: 64 RPLLSIRSDKTLRNIVYKLVPGLFKDEMKRRRI 96
>gi|332019596|gb|EGI60074.1| Polycomb group protein Psc [Acromyrmex echinatior]
Length = 1364
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L DATT+ ECLH FC+ CI +S CP+C + + D
Sbjct: 17 LICLLCRGYLIDATTVGECLHCFCKSCILKYLS--TAAHCPLCKHAINKAK-PNFKADKA 73
Query: 85 LQDVRAKIFP-------LKRRKV 100
LQD+ K+ P LKRR+
Sbjct: 74 LQDIVYKLVPGLYHREMLKRREF 96
>gi|302844195|ref|XP_002953638.1| hypothetical protein VOLCADRAFT_121205 [Volvox carteri f.
nagariensis]
gi|300261047|gb|EFJ45262.1| hypothetical protein VOLCADRAFT_121205 [Volvox carteri f.
nagariensis]
Length = 215
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 18 RETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKIS-DEEIECCPV--CNIDLGCV 74
R ++ AC++C +C+ LL++A EC HT+C CI ++ CPV C + LG
Sbjct: 80 RTSLVACLSCALCHQLLQEAIASLECGHTYCYDCIEARVDIGGNHNVCPVAGCGVVLGPS 139
Query: 75 PLE--KLRPDHTLQDVRAKIFP 94
P + +L D L + KIFP
Sbjct: 140 PFDHHRLVYDTLLDSLVQKIFP 161
>gi|392901078|ref|NP_001255620.1| Protein MIG-32, isoform a [Caenorhabditis elegans]
gi|295982010|emb|CAA92594.4| Protein MIG-32, isoform a [Caenorhabditis elegans]
Length = 549
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL- 71
VK E + +TC IC+ + DATTI +C+HTFC+ C+ + CP C +
Sbjct: 315 TVKYNMEVLNPFITCGICDGYIVDATTIIDCMHTFCKSCLLTYFESDN-NTCPTCGTFIH 373
Query: 72 GCVPLEKLRPDHTLQDVRAKIFP 94
G P + D + ++ + P
Sbjct: 374 GSHPTHYVTYDRAVNELVNQFVP 396
>gi|193700165|ref|XP_001946738.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 338
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQEAITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LRPD + +KI+P + EA + L K S +
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYPSRDEY----EAHQTRVLEKLNKSHSQA 134
Query: 122 SLVVS---APRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASS 178
+LV S ++ Q + R + N + L S+ ST K P +++ +D +
Sbjct: 135 NLVQSINEGIKIQTQNRLQRSKKN----QQDELNESSSSTLKTPS---NNLGLGKDNVTR 187
Query: 179 PETLNKLSQNVKPMQSSSSAQPSQPISSKEKDNDAEQCEGKS 220
K+++ +K + S + P+ + + +D +C+G S
Sbjct: 188 TVVQAKVAKKLKTVMISENDGPASLSADR---SDITECDGSS 226
>gi|432881043|ref|XP_004073777.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oryzias
latipes]
Length = 388
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ + V V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RTPQEVIVDGTEVAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 83 E-CPTCRKKL--VSRRSLRRDSNFDALISKIYP 112
>gi|193643594|ref|XP_001942602.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RSPQEAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLLISKIYP 111
>gi|401408467|ref|XP_003883682.1| putative zinc finger (C3HC4 RING finger) protein [Neospora caninum
Liverpool]
gi|325118099|emb|CBZ53650.1| putative zinc finger (C3HC4 RING finger) protein [Neospora caninum
Liverpool]
Length = 791
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 11 NLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE--CCPVCN 68
+ V+ + A C +C+ R+ TI +CLH+FC+ C++ + E+E CCP C
Sbjct: 173 GMDVRFPLRALEANFRCRLCSGYFREVVTIKDCLHSFCKWCLFARAEKGELEETCCPRCE 232
Query: 69 IDL 71
L
Sbjct: 233 EKL 235
>gi|218186844|gb|EEC69271.1| hypothetical protein OsI_38315 [Oryza sativa Indica Group]
Length = 268
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 333 WFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVE 385
WF L A+++QR PLPQI S+LR++D + V + +YL+ KL L +S+V+
Sbjct: 202 WFVLRAAQNQRREPPLPQIPRSFLRVRDGRMTVRVVMRYLVNKLSLEDDSQVK 254
>gi|195054989|ref|XP_001994405.1| GH17005 [Drosophila grimshawi]
gi|193892168|gb|EDV91034.1| GH17005 [Drosophila grimshawi]
Length = 437
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ ++N + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEIITDNTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LR D + +KI+P R + +A + + +++L
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP-SREEYEALQEKVMAKFNQTQSQQALV 136
Query: 122 SLVVSAPRVSAQTTMTRRRSN 142
+ + ++ +Q R R+N
Sbjct: 137 NSINEGIKLQSQNRPQRFRTN 157
>gi|195380025|ref|XP_002048771.1| GJ21143 [Drosophila virilis]
gi|194143568|gb|EDW59964.1| GJ21143 [Drosophila virilis]
Length = 1561
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLR 80
+ A + C +C L +ATTI ECLH+FC C+ + + E CP C + + ++
Sbjct: 229 VNAHIICHLCQGYLINATTIVECLHSFCHSCLINHLRKERY--CPRCEMVINNA-KPNIK 285
Query: 81 PDHTLQDVRAKIFP 94
D TLQ + K+ P
Sbjct: 286 SDTTLQAIVYKLVP 299
>gi|307147576|gb|ADN37676.1| RING1.B [Oncorhynchus mykiss]
Length = 381
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 12/169 (7%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LR D + +KI+P R + +A + L + R LS
Sbjct: 83 E-CPTCRKKL--VSRRSLRRDSNFDALISKIYP-SRDEYEAHQDRALERLNQQHNNRILS 138
Query: 122 SLVVSAPRVSAQTTMTRRRSNAAARKAAALRG--------SNLSTDKPP 162
S + R+ A R R A G S+LS D P
Sbjct: 139 SSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDTRSHLSHDSAP 187
>gi|348676854|gb|EGZ16671.1| hypothetical protein PHYSODRAFT_345983 [Phytophthora sojae]
Length = 407
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEK-L 79
+ A +TCPIC ++++ + ECLH FC CI I + E CP C I +P ++ L
Sbjct: 76 LNADLTCPICLGIIKETMVVMECLHRFCGDCISTAIRQSKRE-CPSCRIH---IPSKRSL 131
Query: 80 RPDHTLQDVRAKIFP 94
RPD + +KI P
Sbjct: 132 RPDPNFDALISKIHP 146
>gi|14290582|gb|AAH09070.1| Ring finger protein 1 [Mus musculus]
Length = 377
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH C CI + E CP C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRLCSDCIVTALRSGNKE-CPTCRKKL-- 62
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 134 TTMTRRR 140
R R
Sbjct: 122 HRAQRVR 128
>gi|414587496|tpg|DAA38067.1| TPA: hypothetical protein ZEAMMB73_592027 [Zea mays]
Length = 291
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEI 386
+WF+L A+ Q LPQI SYLRIKD + V + KYL +L L ESEV +
Sbjct: 229 VWFALQAAPHQGREPFLPQIPRSYLRIKDARVTVRLLSKYLAGRLGLEDESEVRL 283
>gi|297613170|ref|NP_001066763.2| Os12g0479100 [Oryza sativa Japonica Group]
gi|77555448|gb|ABA98244.1| hypothetical protein LOC_Os12g29500 [Oryza sativa Japonica Group]
gi|255670305|dbj|BAF29782.2| Os12g0479100 [Oryza sativa Japonica Group]
Length = 214
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 333 WFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVE 385
WF L A+++QR PLPQI S+LR++D + V + +YL+ KL L +S+V+
Sbjct: 148 WFVLRAAQNQRREPPLPQIPRSFLRVRDGRMTVRVVMRYLVNKLSLEDDSQVK 200
>gi|21425584|emb|CAD33944.1| BMI1-like protein [Mus musculus]
gi|187955404|gb|AAI47683.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
gi|187956799|gb|AAI47696.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
Length = 194
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
++C IC L DA TI+ECLH+FC+ CI E CP CN+ + P + LR D
Sbjct: 83 ISCFICKGYLIDAATITECLHSFCKSCIVKHF--EHSNRCPKCNLIVHQAKPHKNLRMDP 140
Query: 84 TLQDVRAKI 92
LQ + K+
Sbjct: 141 QLQSIVYKL 149
>gi|195485148|ref|XP_002090969.1| GE13404 [Drosophila yakuba]
gi|194177070|gb|EDW90681.1| GE13404 [Drosophila yakuba]
Length = 1574
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 240 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 296
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 297 LQAIVYKLVP 306
>gi|412993404|emb|CCO16937.1| predicted protein [Bathycoccus prasinos]
Length = 139
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN 68
++V + + A +TC +C +LR+A T++ECLH+FC +CI K+ + CP C
Sbjct: 19 IEVDADILRASLTCEMCKNILREANTVTECLHSFCFQCISSKMIVGQSNYCPACG 73
>gi|8358|emb|CAA41965.1| posterior sex combs [Drosophila melanogaster]
Length = 1603
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 263 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 319
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 320 LQAIVYKLVP 329
>gi|195120009|ref|XP_002004521.1| GI19568 [Drosophila mojavensis]
gi|193909589|gb|EDW08456.1| GI19568 [Drosophila mojavensis]
Length = 1552
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLR 80
+ A + C +C L +ATTI ECLH+FC C+ + + E CP C + + ++
Sbjct: 220 VNAHIICHLCQGYLINATTIVECLHSFCHSCLINHLRKERY--CPRCEMVINNA-KPNIK 276
Query: 81 PDHTLQDVRAKIFP 94
D TLQ + K+ P
Sbjct: 277 SDTTLQAIVYKLVP 290
>gi|168065332|ref|XP_001784607.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663839|gb|EDQ50582.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 557
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
M CPIC ++R T+ ECLH FCR+CI DK CP C C LR D
Sbjct: 1 MQCPICLGIIRKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH--CASRRSLRDDPN 57
Query: 85 LQDVRAKIFP 94
+ A I+P
Sbjct: 58 FDALVAAIYP 67
>gi|24653251|ref|NP_523725.2| posterior sex combs [Drosophila melanogaster]
gi|76803812|sp|P35820.2|PSC_DROME RecName: Full=Polycomb group protein Psc; AltName: Full=Protein
posterior sex combs
gi|7303376|gb|AAF58434.1| posterior sex combs [Drosophila melanogaster]
gi|71043368|gb|AAZ20646.1| posterior sex combs [Drosophila melanogaster]
gi|269914199|gb|ACZ52619.1| MIP14548p [Drosophila melanogaster]
Length = 1601
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 261 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 317
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 318 LQAIVYKLVP 327
>gi|242072816|ref|XP_002446344.1| hypothetical protein SORBIDRAFT_06g014520 [Sorghum bicolor]
gi|241937527|gb|EES10672.1| hypothetical protein SORBIDRAFT_06g014520 [Sorghum bicolor]
Length = 328
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 32/55 (58%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEI 386
+WF+L A+ Q LPQI SYLRIKD + V + KYL KL L ESEV
Sbjct: 262 VWFALQAAPHQGREPFLPQIPRSYLRIKDGRVTVRLLIKYLAGKLGLEDESEVRF 316
>gi|194883476|ref|XP_001975827.1| GG22533 [Drosophila erecta]
gi|190659014|gb|EDV56227.1| GG22533 [Drosophila erecta]
Length = 1573
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 235 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 291
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 292 LQAIVYKLVP 301
>gi|63169173|gb|AAY34709.1| ring finger protein 1 [Bos taurus]
gi|124054128|gb|ABM89251.1| RING1 [Pongo pygmaeus]
Length = 122
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CPIC +L++ T ECLH FC CI + E CP C L V LRPD
Sbjct: 17 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRPDPN 73
Query: 85 LQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
+ +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 74 FDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQA 120
>gi|443730024|gb|ELU15719.1| hypothetical protein CAPTEDRAFT_175258 [Capitella teleta]
Length = 413
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
+ C +CN LL DA I+ C ++FC +CI D + D E CPVC
Sbjct: 260 LLCALCNDLLSDAVVIACCGNSFCDECIRDSLLDSETHTCPVC 302
>gi|405976694|gb|EKC41192.1| Retinoblastoma-binding protein 6 [Crassostrea gigas]
Length = 1320
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 17 KRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN 68
K+E I A + CP+C LL DA I C +FC CI +++ D E CP C+
Sbjct: 253 KKEEIPAELLCPLCRDLLSDAVLIPCCGTSFCDDCIRNELLDSEDHECPQCH 304
>gi|195394708|ref|XP_002055984.1| GJ10686 [Drosophila virilis]
gi|194142693|gb|EDW59096.1| GJ10686 [Drosophila virilis]
Length = 443
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LR D + +KI+P + + E + + P + +++L
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYPSREEYEASQEKIMAKFNPT-QSQKALV 136
Query: 122 SLVVSAPRVSAQTTMTRRRSN 142
+ + ++ +Q R R+N
Sbjct: 137 NSINEGIKLQSQNRPQRFRTN 157
>gi|71059767|emb|CAJ18427.1| Ring1 [Mus musculus]
Length = 377
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
+ V ++ + + CPIC +L++ T ECLH C CI + E CP C L
Sbjct: 6 IAVSPRSLHSELMCPICLDVLKNTMTTKECLHRLCSDCIVTALRSGNKE-CPTCRKKL-- 62
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 134 TTMTRRR 140
R R
Sbjct: 122 HRAQRVR 128
>gi|71043360|gb|AAZ20642.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1450
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 261 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 317
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 318 LQAIVYKLVP 327
>gi|148362153|gb|ABQ59676.1| RING1 [Salmo salar]
Length = 395
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 30 RSPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 89
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 90 E-CPTCRKKL--VSRRSLRRDSNFDALISKIYP 119
>gi|195113599|ref|XP_002001355.1| GI10743 [Drosophila mojavensis]
gi|193917949|gb|EDW16816.1| GI10743 [Drosophila mojavensis]
Length = 440
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLS 121
E CP C L V LR D + +KI+P + + E + + P + +++L
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYPSREEYEASQEKIMAKFNPT-QSQKALV 136
Query: 122 SLVVSAPRVSAQTTMTRRRSN 142
+ + ++ +Q R R+N
Sbjct: 137 NSINEGIKLQSQNRPQRFRTN 157
>gi|260182163|gb|ACX35592.1| RING1 [Salmo salar]
Length = 388
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RSPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 83 E-CPTCRKKL--VSRRSLRRDSNFDALISKIYP 112
>gi|291244940|ref|XP_002742351.1| PREDICTED: deltex 3-like [Saccoglossus kowalevskii]
Length = 1285
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 5 REMASNNLVVKVKRETIAAC--------MTCPICNTLLRDATTISECLHTFCRKCIYDKI 56
R A L K KR + A+ + CPIC + D + +C HTFCR CI +
Sbjct: 1075 RAEAKQRLAQKPKRSSSASARFANTQSPLECPICMERVSDPKMLQDCQHTFCRACIDRAL 1134
Query: 57 SDEEIECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPL 95
D+ + CPVC + G L +PD T+ K+ L
Sbjct: 1135 KDKPV--CPVCGLIYGT--LTGSQPDGTMNTTVDKLHSL 1169
>gi|224079177|ref|XP_002305782.1| predicted protein [Populus trichocarpa]
gi|222848746|gb|EEE86293.1| predicted protein [Populus trichocarpa]
Length = 463
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 33/198 (16%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDK---ISDEEIECCPVCNI 69
V VK I + CPIC ++R T+ ECLH FCR+CI DK + + E CP C
Sbjct: 76 YVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKSMRLGNNE---CPACRT 131
Query: 70 DLGCVPLEKLRPDHTLQDVRAKIFP------------LKRRKVKAPEAVPSVTLPVRRKE 117
C LR D + + ++P + K + + ++ R+
Sbjct: 132 H--CASRRSLRDDPNYDALISALYPDIDKYEEEELAFQEEEKARNKQIQATIAQTFHRQA 189
Query: 118 RSLS----SLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNE 173
+LS + V+A + +T R +++ R+ + G S D ED+ N
Sbjct: 190 EALSRKKTTAKVTAAAFARRTPSRFRDAHSRGRRNYRMAGFQGSDDN-----EDA---NG 241
Query: 174 DGASSPETLNKLSQNVKP 191
DG + ++ S VKP
Sbjct: 242 DGGKDSSSADEHSAEVKP 259
>gi|326490487|dbj|BAJ84907.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 31/230 (13%)
Query: 4 EREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIEC 63
E + A + + VK I + CPIC ++R T+ ECLH FCR CI DK
Sbjct: 99 ESDAADMDEFILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNE 157
Query: 64 CPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP------------LKRRKVKAPEAVPSVTL 111
CP C C LR D + ++P + K + + S+
Sbjct: 158 CPACRTH--CKSRRSLRDDPNFDALILALYPDIDKYEEEELAFGEEEKTRNKKIQDSIAE 215
Query: 112 PVRRKERSLSSLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDS--V 169
RR+ +L R +A+ + R++ + R RG S D P +D
Sbjct: 216 TFRRQTEALVK-----KRSNAKAIASSRKTRGSLRTKK--RGRTSSPDNAPTDIDDDERE 268
Query: 170 EDNEDGASSPETLNKLSQNVK-------PMQSSSSAQPSQPISSKEKDND 212
E+ DG+ +++ S +VK P+ SS A+ + S ++ND
Sbjct: 269 ENGNDGSKESSSVDDRSPDVKMKRARRWPVPRSSPAKTIGGVDSSYEEND 318
>gi|195426447|ref|XP_002061346.1| GK20772 [Drosophila willistoni]
gi|194157431|gb|EDW72332.1| GK20772 [Drosophila willistoni]
Length = 1381
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRP 81
+ +TC IC + D TT+ C HT+CR CI + + CP C G + + LRP
Sbjct: 17 SLITCNICQGYMIDPTTVDYCYHTYCRSCILKHLLRDAY--CPECKSSGGKQISEDNLRP 74
Query: 82 DHTLQDVRAKIFP 94
D+T + + K+ P
Sbjct: 75 DNTKRSLIYKLVP 87
>gi|340375342|ref|XP_003386195.1| PREDICTED: gamma-aminobutyric acid type B receptor subunit 1-like
[Amphimedon queenslandica]
Length = 935
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 5 REMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECC 64
++ ++ ++++ + + + CPIC L+++A T ECLH FC++CI + E C
Sbjct: 26 HDVVTDGSLLRISPRALHSELMCPICLDLMKNAQTTKECLHRFCQECIITALRSGNKE-C 84
Query: 65 PVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLV 124
P C L LR D + AKI+P R ++ + P +T +SL L
Sbjct: 85 PTCRKKLA--SKRSLRSDPNFDALIAKIYP-NRDELLQQQDKPRLTF-----HQSLQYLS 136
Query: 125 VSAPRVSAQ--------TTMTRRRSNAAARKAAALRGSNLSTDKPPKKEE--DSVEDNED 174
R+ Q + + N A A G LS+ P + D + NED
Sbjct: 137 TRKVRLEFQLRPHPSDDSVASLDIRNLATSPGATATGPFLSSGALPIIDYALDEINKNED 196
>gi|198457433|ref|XP_002138393.1| GA24743 [Drosophila pseudoobscura pseudoobscura]
gi|198135976|gb|EDY68951.1| GA24743 [Drosophila pseudoobscura pseudoobscura]
Length = 1490
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPD 82
+TC +C + D TT+ C HT+CR CI + + CP C + LR D
Sbjct: 26 GLITCGLCQGYMIDPTTVDYCYHTYCRSCILKHL--LRVAYCPQCKASGKEISEINLRSD 83
Query: 83 HTLQDVRAKIFP-LKRR 98
TL+ + K+ P L RR
Sbjct: 84 DTLRSLIYKLVPGLYRR 100
>gi|359483484|ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
vinifera]
Length = 534
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V VK I + CPIC ++R T+ ECLH FCR+CI DK CP C
Sbjct: 150 FVIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH-- 206
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 207 CASRRSLRDDPNYDALIAALYP 228
>gi|71043362|gb|AAZ20643.1| truncated posterior sex combs [Drosophila melanogaster]
gi|71043370|gb|AAZ20647.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1095
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 261 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 317
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 318 LQAIVYKLVP 327
>gi|224125396|ref|XP_002329795.1| predicted protein [Populus trichocarpa]
gi|222870857|gb|EEF07988.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Query: 4 EREMASNNLVVKVKRETIAACMT-------CPICNTLLRDATTISECLHTFCRKCIYDK- 55
+R S+N+ VK E + ++ CPIC ++R T+ ECLH FCR+CI DK
Sbjct: 49 DRSQPSSNINEDVKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKS 107
Query: 56 --ISDEEIECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
+ + E CP C C LR D + A ++P
Sbjct: 108 MRLGNNE---CPACRTH--CASRRSLRDDPNYDALIAALYP 143
>gi|195426449|ref|XP_002061347.1| GK20868 [Drosophila willistoni]
gi|194157432|gb|EDW72333.1| GK20868 [Drosophila willistoni]
Length = 1574
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 240 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERY--CPRCEMVINNA-KPNIKSDTT 296
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 297 LQAIVYKLVP 306
>gi|71043358|gb|AAZ20641.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 1072
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 261 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 317
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 318 LQAIVYKLVP 327
>gi|313228993|emb|CBY18145.1| unnamed protein product [Oikopleura dioica]
Length = 802
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKL 79
I+ + CP+C + DA ++ C H FCR CI I E + CPVC++ + P + +
Sbjct: 591 ISPALACPLCGGYIIDAISLDGCGHAFCRGCILRHI--HESKKCPVCDVTIHYTDPTKSM 648
Query: 80 RPDHTLQDVRAKIFP 94
+ D L D+ + P
Sbjct: 649 KHDQLLCDLIYLMVP 663
>gi|297740412|emb|CBI30594.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V VK I + CPIC ++R T+ ECLH FCR+CI DK CP C
Sbjct: 49 FVIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH-- 105
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 106 CASRRSLRDDPNYDALIAALYP 127
>gi|118367192|ref|XP_001016811.1| DNA-binding protein Mel-18, RING finger protein [Tetrahymena
thermophila]
gi|89298578|gb|EAR96566.1| DNA-binding protein Mel-18, RING finger protein [Tetrahymena
thermophila SB210]
Length = 447
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEE----IECCPVCNIDLGCVPL 76
+ + + C IC+ R A TI+EC HTFC+ CI+D IS + CP C +L
Sbjct: 29 LNSFLVCGICDGYFRFAHTITECGHTFCKICIHDYISKNQNTKNKRKCPSCKGELEIHLS 88
Query: 77 EKLRPDHTLQDVRAKIFP 94
+ +R D Q + ++P
Sbjct: 89 KSIRKDPYKQQMVDFLYP 106
>gi|193652565|ref|XP_001945787.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 332
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R E+ +++ ++V E+I + CPIC LL + T ++CLH FC +CI +
Sbjct: 23 RTCHEVITDDTEIEVPLESIHKDLMCPICLELL-NKTMATKCLHRFCSECIVTALRAGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
+ CP C L + LRPDH + + +K+FP
Sbjct: 82 K-CPTCRKRL--ISKRCLRPDHNIDLLISKLFP 111
>gi|52350624|gb|AAH82771.1| Ring1 protein [Mus musculus]
Length = 154
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CPIC +L++ T ECLH FC CI + E CP C L V LRPD
Sbjct: 17 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRPDPN 73
Query: 85 LQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
+ +KI+P R + +A + + L +++LSS + R+ A
Sbjct: 74 FDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQA 120
>gi|260182172|gb|ACX35600.1| RING1 [Salmo salar]
Length = 387
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 83 E-CPTCRKKL--VSRRSLRRDSNFDALISKIYP 112
>gi|291190270|ref|NP_001167351.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
gi|223649380|gb|ACN11448.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
Length = 388
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 83 E-CPTCRKKL--VSRRSLRRDSNFDALISKIYP 112
>gi|293331775|ref|NP_001169665.1| uncharacterized LOC100383546 [Zea mays]
gi|224030721|gb|ACN34436.1| unknown [Zea mays]
gi|414880136|tpg|DAA57267.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 474
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
N+ + VK I + CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 85 GGNDGFMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPSC 143
Query: 68 NIDLGCVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 144 RTH--CASRRSLRDDPNYDALIAALYP 168
>gi|71043375|gb|AAZ20649.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 907
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 261 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 317
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 318 LQAIVYKLVP 327
>gi|226469290|emb|CAX70124.1| ring finger protein 2 [Schistosoma japonicum]
gi|226486844|emb|CAX74499.1| ring finger protein 2 [Schistosoma japonicum]
Length = 472
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V+ V ++ + + CPIC +L+ T ECLH FC +CI + E CP C L
Sbjct: 31 VIAVSPRSLKSELMCPICLDILKVTMTTKECLHRFCSECIITALRSGNKE-CPTCRKKL- 88
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPE 104
V LR D + AKI+P R++ +A +
Sbjct: 89 -VSKRSLRRDPNFDALIAKIYP-SRQEYEAHQ 118
>gi|195150629|ref|XP_002016253.1| GL11486 [Drosophila persimilis]
gi|194110100|gb|EDW32143.1| GL11486 [Drosophila persimilis]
Length = 1495
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLE-KLRP 81
+TC +C + D TT+ C HT+CR CI + + CP C G E LR
Sbjct: 26 GLITCGLCQGYMIDPTTVDYCYHTYCRSCILKHL--LRVAYCPQCKASGGKEISEINLRS 83
Query: 82 DHTLQDVRAKIFP-LKRR 98
D TL+ + K+ P L RR
Sbjct: 84 DDTLRSLIYKLVPGLYRR 101
>gi|328857391|gb|EGG06508.1| hypothetical protein MELLADRAFT_36161 [Melampsora larici-populina
98AG31]
Length = 824
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 26 TCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIECCPVCN----IDLGCVPLEKL 79
TC +C DA IS C H FCR+CI Y + + E CPVC+ IDL +++
Sbjct: 573 TCRLCLDEAEDAI-ISCCKHIFCRECIRQYLETASEVEPECPVCHLPISIDLSQEAIDEE 631
Query: 80 RPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQTTMTRR 139
Q V A++ P K R EA+ + +++ S+ SLV S + + + R
Sbjct: 632 SSSKARQGVLARLDPGKWRTSTKIEALVEELSKLNKEDHSIKSLVFS--QFTVFLDLIER 689
Query: 140 RSNAAARKAAALRG 153
R A K A L+G
Sbjct: 690 RLQLAGFKLARLQG 703
>gi|195027952|ref|XP_001986846.1| GH21599 [Drosophila grimshawi]
gi|193902846|gb|EDW01713.1| GH21599 [Drosophila grimshawi]
Length = 1357
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 16 IICHLCQGYLINATTIVECLHSFCHNCLINHLRKERY--CPRCEMVINNA-KPNIKSDTT 72
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 73 LQAIVYKLVP 82
>gi|401884538|gb|EJT48693.1| mRNA polyadenylation-related protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 563
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 20 TIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
T+ A +TC +C LR+AT C FC +CI + D + E CP C + L+KL
Sbjct: 291 TLDAELTCALCKKALREATRTPCCDTAFCEECIQTYLVDHDFE-CPQCESKI--TSLDKL 347
Query: 80 RPDHTLQD 87
+PD L+D
Sbjct: 348 QPDQDLRD 355
>gi|242076968|ref|XP_002448420.1| hypothetical protein SORBIDRAFT_06g026880 [Sorghum bicolor]
gi|241939603|gb|EES12748.1| hypothetical protein SORBIDRAFT_06g026880 [Sorghum bicolor]
Length = 493
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
N + VK I + CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 94 GGTNEFMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPTC 152
Query: 68 NIDLGCVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 153 RTH--CASRRSLRDDPKYDALIAALYP 177
>gi|189242216|ref|XP_968722.2| PREDICTED: similar to xbmi-1 protein [Tribolium castaneum]
gi|270015796|gb|EFA12244.1| hypothetical protein TcasGA2_TC005276 [Tribolium castaneum]
Length = 801
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +CN L DATT++EC H FCR CI + CP CN+ + D
Sbjct: 17 LVCTLCNGYLVDATTLTECHHVFCRGCILRHFETCKT-ACPSCNLVYKKKNQVFFKADPQ 75
Query: 85 LQDVRAKIFP 94
+Q + K+ P
Sbjct: 76 IQSIVYKVVP 85
>gi|348545246|ref|XP_003460091.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oreochromis
niloticus]
Length = 329
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E + V V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 23 RSPQEAIMDGTEVAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNK 82
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 83 E-CPTCRKKL--VSRRSLRRDSNFDALISKIYP 112
>gi|357125426|ref|XP_003564395.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Brachypodium distachyon]
Length = 481
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ VK I CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 91 FILVKLAEIRKEFQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH-- 147
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 148 CASRRSLRDDPNYDALIATLYP 169
>gi|222632098|gb|EEE64230.1| hypothetical protein OsJ_19063 [Oryza sativa Japonica Group]
Length = 821
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ VK I + CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 84 FILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH-- 140
Query: 73 CVPLEKLRPDHTLQDVRAKIFP-----------------LKRRKVKAPEAVPSVTLPVRR 115
C LR D + ++P + +K++A S+ RR
Sbjct: 141 CASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKKIQA-----SIAETFRR 195
Query: 116 KERSLSSLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTD--KPPKKEEDSVEDNE 173
+ +L S + + T R R N A++ RG S D ++ED E+
Sbjct: 196 QSEALVK-KRSVAKATGSTITRRTRGNMRAKR----RGRTSSPDIVATDNEDEDRDENGN 250
Query: 174 DGASSPETLNKLSQNVK-------PMQSSSSAQPSQPISSKEKDND 212
+G+ +++ S +V+ P+ SS A+ I S +D D
Sbjct: 251 EGSKESSSVDDRSPDVRQKRVRRWPVPRSSPAKSIGGIDSSFEDID 296
>gi|19075201|ref|NP_587701.1| ATP-dependent helicase [Schizosaccharomyces pombe 972h-]
gi|3647341|emb|CAA21065.1| Rad16 homolog Rhp16 [Schizosaccharomyces pombe]
Length = 963
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 5 REMASN-NLVVKVKRETI----AACMTCPICNTLLRDATTISECLHTFCRKCIYDKIS-- 57
R+MA + +LV+ KR+T+ + C IC+ + +DA S C HTFCR C+ + I+
Sbjct: 684 RQMADHPDLVLASKRKTVDIENQENIVCKICDEVAQDAIE-SRCHHTFCRLCVTEYINAA 742
Query: 58 -DEEIECCPVC----NIDLGCVPLEKLRPDHTLQ-DVRAKIFPLKRRKVKAPEAVPSVTL 111
D E CP C +IDL LE + + +I R EA+
Sbjct: 743 GDGENVNCPSCFIPLSIDLSAPALEDFSEEKFKNASILNRIDMNSWRSSTKIEALVEELY 802
Query: 112 PVRRKERSLSSLVVSAPRVSAQTTMTRRRSNAAARKAAALRGS 154
+R+K+R+L S+V S + ++ + R A L G
Sbjct: 803 LLRKKDRTLKSIVFS--QFTSMLDLIHWRLRKAGFNCVKLDGG 843
>gi|193610656|ref|XP_001946247.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E +++ + V +I + CPIC +L+ T ECLH FC CI +
Sbjct: 22 RTPQEPITDDTEIAVSPRSIQNELMCPICLDVLKKTMTAKECLHRFCSDCIVTALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LRPD + +KI+P
Sbjct: 82 E-CPTCRKKL--VSKRSLRPDPNFDLIISKIYP 111
>gi|221508889|gb|EEE34458.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii VEG]
Length = 744
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE--CCPVC 67
+ + V+ + C +C+ R+A TI +CLH+FC+ C+ + E+E CCP C
Sbjct: 151 DGMDVRFPLRAVEQHFRCRLCSGYFREAVTIKDCLHSFCKWCLLARAEKGELEETCCPRC 210
Query: 68 NIDL 71
L
Sbjct: 211 EEKL 214
>gi|237833259|ref|XP_002365927.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211963591|gb|EEA98786.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
Length = 744
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE--CCPVC 67
+ + V+ + C +C+ R+A TI +CLH+FC+ C+ + E+E CCP C
Sbjct: 151 DGMDVRFPLRAVEQHFRCRLCSGYFREAVTIKDCLHSFCKWCLLARAEKGELEETCCPRC 210
Query: 68 NIDL 71
L
Sbjct: 211 EEKL 214
>gi|358338769|dbj|GAA31345.2| E3 ubiquitin-protein ligase RNF1/2 [Clonorchis sinensis]
Length = 388
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ + V ++ + + CPIC +L+ T ECLH FC +CI +
Sbjct: 18 RKPQEPITDGTEIAVSPRSLKSELMCPICLDILKGTMTTKECLHRFCAECIVTALRSGNK 77
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + AKI+P
Sbjct: 78 E-CPTCRKKL--VSKRSLRRDPNFDALIAKIYP 107
>gi|221488387|gb|EEE26601.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii GT1]
Length = 744
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 10 NNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE--CCPVC 67
+ + V+ + C +C+ R+A TI +CLH+FC+ C+ + E+E CCP C
Sbjct: 151 DGMDVRFPLRAVEQHFRCRLCSGYFREAVTIKDCLHSFCKWCLLARAEKGELEETCCPRC 210
Query: 68 NIDL 71
L
Sbjct: 211 EEKL 214
>gi|390365600|ref|XP_003730853.1| PREDICTED: uncharacterized protein LOC100892315 [Strongylocentrotus
purpuratus]
Length = 1255
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 1 MRVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI--YDK-IS 57
+ ++ M + K+K E + C+ CP+C +LR+AT +S C H+FCR C+ YDK +
Sbjct: 606 IFIQLGMQQTAMAAKLKEEKLQ-CLNCPLCLDVLRNATILS-CGHSFCRGCLEAYDKQLK 663
Query: 58 DEEIECCPVC 67
D CPVC
Sbjct: 664 DLNHIVCPVC 673
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 24 CMTCPICNTLLRDATTISECLHTFCRKCI--YDKIS-DEEIECCPVC 67
C+ CP+C ++R+AT +S C H+FCR C+ YDK D CPVC
Sbjct: 12 CLNCPMCLDVIRNATLLS-CGHSFCRDCLEAYDKQHKDLNHIVCPVC 57
>gi|71043373|gb|AAZ20648.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 757
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 261 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 317
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 318 LQAIVYKLVP 327
>gi|223994027|ref|XP_002286697.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978012|gb|EED96338.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 624
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 19 ETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
++I A + CP+CNT++++A+T+ EC H+FC CI + CPV DL
Sbjct: 17 DSIRASLLCPLCNTIMKEASTL-ECGHSFCHDCIQGYTCNSWT--CPVVGCDL 66
>gi|198457431|ref|XP_001360669.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
gi|198135975|gb|EAL25244.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
Length = 1591
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + + CP C + + ++ D T
Sbjct: 247 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKDRF--CPRCEMVINNA-KPNIKSDTT 303
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 304 LQAIVYKLVP 313
>gi|195150625|ref|XP_002016251.1| GL10594 [Drosophila persimilis]
gi|194110098|gb|EDW32141.1| GL10594 [Drosophila persimilis]
Length = 1624
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + + CP C + + ++ D T
Sbjct: 281 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKDRF--CPRCEMVINNA-KPNIKSDTT 337
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 338 LQAIVYKLVP 347
>gi|146162240|ref|XP_001009052.2| hypothetical protein TTHERM_00263030 [Tetrahymena thermophila]
gi|146146486|gb|EAR88807.2| hypothetical protein TTHERM_00263030 [Tetrahymena thermophila
SB210]
Length = 447
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 3 VEREMASNNLVVKVKRETIAA----------------CMTCPICNTLLRDATTISECLHT 46
+E+ N+ V KRE I A +TCPIC + ++ + C H
Sbjct: 10 LEQNQDVQNISVFRKREKIHANDDQLIDMDPLKKLNYMLTCPICLDIFQEPVYVKGCSHR 69
Query: 47 FCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIF 93
FC++CI I +++ CP C +G L LR D +Q++ I+
Sbjct: 70 FCKECIEKAIRSSKMKQCPTCRRIIGTKRL--LRVDFNVQEIINLIY 114
>gi|14043225|gb|AAH07602.1| Polycomb group ring finger 6 [Homo sapiens]
Length = 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 134 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 176
>gi|76157474|gb|AAX28386.2| SJCHGC04391 protein [Schistosoma japonicum]
Length = 169
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 5 REMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECC 64
+E ++ V+ V ++ + + CPIC +L+ T ECLH FC +CI + E C
Sbjct: 23 QEPITDGTVIAVSPRSLKSELMCPICLDILKVTMTTKECLHRFCSECIITALRSGNKE-C 81
Query: 65 PVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
P C L V LR D + AKI+P
Sbjct: 82 PTCRKKL--VSKRSLRRDPNFDALIAKIYP 109
>gi|37655165|ref|NP_115530.2| polycomb group RING finger protein 6 isoform b [Homo sapiens]
gi|119570035|gb|EAW49650.1| polycomb group ring finger 6, isoform CRA_d [Homo sapiens]
Length = 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 174
>gi|114632656|ref|XP_001135053.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Pan
troglodytes]
Length = 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 174
>gi|71043356|gb|AAZ20640.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 520
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 263 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAK-PNIKSDTT 319
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 320 LQAIVYKLVP 329
>gi|345792753|ref|XP_003433662.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Canis
lupus familiaris]
Length = 274
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 131 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 173
>gi|294462674|gb|ADE76882.1| unknown [Picea sitchensis]
Length = 475
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDK---ISDEEIECCPVCNIDLGCVPLEKLRP 81
M CPIC ++R T+ ECLH FCR CI DK + + E CP C C LR
Sbjct: 64 MQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNE---CPACRTH--CASRRSLRD 117
Query: 82 DHTLQDVRAKIFP 94
D + A I+P
Sbjct: 118 DPNYDALIAAIYP 130
>gi|256080096|ref|XP_002576319.1| polycomb-m33 interacting protein ring1b [Schistosoma mansoni]
gi|350646016|emb|CCD59293.1| polycomb-m33 interacting protein ring1b,putative [Schistosoma
mansoni]
Length = 460
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 5 REMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECC 64
+E ++ V+ V ++ + + CPIC +L+ T ECLH FC +CI + + E C
Sbjct: 22 QEPITDGTVIAVSPRSLKSELMCPICLDILKVTMTTKECLHRFCSECIITALRNGNKE-C 80
Query: 65 PVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPE 104
P C L V LR D + +KI+P R++ +A +
Sbjct: 81 PTCRKKL--VSKRSLRRDPNFDALISKIYP-SRQEYEAHQ 117
>gi|195650523|gb|ACG44729.1| protein binding protein [Zea mays]
gi|413919170|gb|AFW59102.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 487
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
VK I + CPIC ++R T+ ECLH FCR CI DK CP C C
Sbjct: 104 VKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH--CAS 160
Query: 76 LEKLRPDHTLQDVRAKIFP 94
LR D + A ++P
Sbjct: 161 RRSLRDDPNYDALIAALYP 179
>gi|357128851|ref|XP_003566083.1| PREDICTED: uncharacterized protein LOC100846593 [Brachypodium
distachyon]
Length = 917
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 11/210 (5%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ VK I + CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 109 FIVVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH-- 165
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
C LR D + ++P + + E S+ RR+ +L R +A
Sbjct: 166 CKSRRSLRDDPNFDALILALYPDIDKYEE--EIQESIAETFRRQTEALVK-----KRSTA 218
Query: 133 QTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLSQNVKPM 192
+ + R++ R R S+ +ED E+ DG+ +++ S +VK
Sbjct: 219 KAIASSRKTRGNLRAKRRGRTSSPDIVTSDIDDEDKEENGNDGSKESSSVDDRSPDVKVK 278
Query: 193 QSSSSAQPSQPISSKEKDNDAEQCEGKSDL 222
++ P +P SK + EG DL
Sbjct: 279 RARRWPVP-RPSPSKTIGSIDGTYEGNDDL 307
>gi|195333940|ref|XP_002033644.1| GM20318 [Drosophila sechellia]
gi|194125614|gb|EDW47657.1| GM20318 [Drosophila sechellia]
Length = 286
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 185 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAK-PNIKSDTT 241
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 242 LQAIVYKLVP 251
>gi|194754549|ref|XP_001959557.1| GF12933 [Drosophila ananassae]
gi|190620855|gb|EDV36379.1| GF12933 [Drosophila ananassae]
Length = 1371
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEK-----L 79
+TC +C + D TT+ +C HT+CR CI + + CP C + G + + L
Sbjct: 18 ITCGLCRGYMVDPTTVDDCYHTYCRSCILKHL--LRMPYCPDCKMSRGAKEISEITESNL 75
Query: 80 RPDHTLQDVRAKIFP-LKRRKVKA 102
R D L+ + K+ P L +R+ +A
Sbjct: 76 RSDDVLRTLIYKMVPGLYQRECQA 99
>gi|358055938|dbj|GAA98283.1| hypothetical protein E5Q_04966 [Mixia osmundae IAM 14324]
Length = 1129
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIEC----CPVCN----IDLG 72
I TC IC D ++C H FCR+C I D I CPVC+ IDL
Sbjct: 871 ITDIHTCRICLDEAEDPIISAKCKHVFCRECARQYI-DSAIHGVTPDCPVCHLPLSIDLE 929
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSA 132
+E + Q + ++I P K R EA+ R + +L +L+ S + ++
Sbjct: 930 QETIEDVDEKQARQGMLSRIDPGKWRTSTKIEAIVEELSKTRNENHTLKTLIFS--QFTS 987
Query: 133 QTTMTRRRSNAAARKAAALRGS 154
+ RR A K A L+GS
Sbjct: 988 FLDILARRLQLAGYKIARLQGS 1009
>gi|71043366|gb|AAZ20645.1| truncated posterior sex combs [Drosophila melanogaster]
Length = 375
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 261 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAK-PNIKSDTT 317
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 318 LQAIVYKLVP 327
>gi|109090466|ref|XP_001113708.1| PREDICTED: polycomb group RING finger protein 6-like isoform 1
[Macaca mulatta]
Length = 275
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 132 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 174
>gi|193688279|ref|XP_001947251.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 335
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++N + V +I + CPIC +L+ T ECLH FC +CI +
Sbjct: 22 RSPQEPITDNTEIAVSPRSIHNELMCPICLDVLKKTMTTKECLHRFCSECIVTALRSGNK 81
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 82 E-CPTCRKKL--VSKRSLRADPNFDLIISKIYP 111
>gi|14195095|sp|P79051.2|RHP16_SCHPO RecName: Full=ATP-dependent helicase rhp16; AltName: Full=DNA
repair protein rhp16; AltName: Full=RAD16 homolog
Length = 861
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 5 REMASN-NLVVKVKRETI----AACMTCPICNTLLRDATTISECLHTFCRKCIYDKI--- 56
R+MA + +LV+ KR+T+ + C IC+ + +DA S C HTFCR C+ + I
Sbjct: 582 RQMADHPDLVLASKRKTVDIENQENIVCKICDEVAQDAIE-SRCHHTFCRLCVTEYINAA 640
Query: 57 SDEEIECCPVC----NIDLGCVPLEKLRPDHTLQ-DVRAKIFPLKRRKVKAPEAVPSVTL 111
D E CP C +IDL LE + + +I R EA+
Sbjct: 641 GDGENVNCPSCFIPLSIDLSAPALEDFSEEKFKNASILNRIDMNSWRSSTKIEALVEELY 700
Query: 112 PVRRKERSLSSLVVSAPRVSAQTTMTRRRSNAAARKAAALRGS 154
+R+K+R+L S+V S + ++ + R A L G
Sbjct: 701 LLRKKDRTLKSIVFS--QFTSMLDLIHWRLRKAGFNCVKLDGG 741
>gi|326923041|ref|XP_003207750.1| PREDICTED: e3 ubiquitin-protein ligase DTX3L-like [Meleagris
gallopavo]
Length = 643
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 5 REMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECC 64
RE +S + + + K +T TCPIC + D +++C H FC+ CI K++ E + C
Sbjct: 442 REKSSYSSMEQAKAKTEDTNDTCPICMEKINDKEILTKCKHAFCKSCI--KMALEYKQTC 499
Query: 65 PVCNIDLGCV 74
PVCN G +
Sbjct: 500 PVCNTVYGVM 509
>gi|194745676|ref|XP_001955313.1| GF18697 [Drosophila ananassae]
gi|190628350|gb|EDV43874.1| GF18697 [Drosophila ananassae]
Length = 432
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ ++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEVITDGTEIGVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|344274773|ref|XP_003409189.1| PREDICTED: polycomb group RING finger protein 6-like isoform 2
[Loxodonta africana]
Length = 271
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 128 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 170
>gi|194205865|ref|XP_001502796.2| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 260
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP---LEKL-- 79
+TC IC L TT++ECLHTFC+ CI D CP C L V +E L
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPRCGNQLKVVYKILIETLFS 73
Query: 80 RPDHTLQDVRAKIFPLKRRK 99
R D+TL+++ K+ P R +
Sbjct: 74 RLDNTLEEIIFKLVPGLREQ 93
>gi|357529591|gb|AET80943.1| TRIM5 alpha [Oryctolagus cuniculus algirus]
Length = 489
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCVPLEKLR 80
+TCPIC LL + +I +C H+FC+ CI Y+ + +E+E CPVC I LE LR
Sbjct: 13 VTCPICLELLVEPLSI-DCGHSFCQACITANYESMIAKEMESRCPVCRIG---YQLENLR 68
Query: 81 PDHTLQDVRAKIFPLK 96
P+ + ++ KI +K
Sbjct: 69 PNRHVANIVEKINEIK 84
>gi|198450246|ref|XP_001357898.2| GA18995 [Drosophila pseudoobscura pseudoobscura]
gi|198130953|gb|EAL27034.2| GA18995 [Drosophila pseudoobscura pseudoobscura]
Length = 439
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|195158327|ref|XP_002020043.1| GL13768 [Drosophila persimilis]
gi|194116812|gb|EDW38855.1| GL13768 [Drosophila persimilis]
Length = 439
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|1881825|gb|AAB49515.1| Rhp16 [Schizosaccharomyces pombe]
Length = 854
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 5 REMASN-NLVVKVKRETI----AACMTCPICNTLLRDATTISECLHTFCRKCIYDKI--- 56
R+MA + +LV+ KR+T+ + C IC+ + +DA S C HTFCR C+ + I
Sbjct: 575 RQMADHPDLVLASKRKTVDIENQENIVCKICDEVAQDAIE-SRCHHTFCRLCVTEYINAA 633
Query: 57 SDEEIECCPVC----NIDLGCVPLEKLRPDHTLQ-DVRAKIFPLKRRKVKAPEAVPSVTL 111
D E CP C +IDL LE + + +I R EA+
Sbjct: 634 GDGENVNCPSCFIPLSIDLSAPALEDFSEEKFKNASILNRIDMNSWRSSTKIEALVEELY 693
Query: 112 PVRRKERSLSSLVVSAPRVSAQTTMTRRRSNAAARKAAALRGS 154
+R+K+R+L S+V S + ++ + R A L G
Sbjct: 694 LLRKKDRTLKSIVFS--QFTSMLDLIHWRLRKAGFNCVKLDGG 734
>gi|218189211|gb|EEC71638.1| hypothetical protein OsI_04070 [Oryza sativa Indica Group]
Length = 491
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ VK I + CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 101 FIIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH-- 157
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 158 CASRRSLRDDPNYDALIAALYP 179
>gi|157785680|ref|NP_001099143.1| tripartite motif-containing protein 5 [Oryctolagus cuniculus]
gi|156752128|gb|ABU93816.1| TRIM5 [Oryctolagus cuniculus]
gi|218456325|gb|ACK77571.1| tripartite motif-containing 5 (predicted) [Oryctolagus cuniculus]
Length = 489
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCVPLEKLR 80
+TCPIC LL + +I +C H+FC+ CI Y+ + +E+E CPVC I LE LR
Sbjct: 13 VTCPICLELLVEPLSI-DCGHSFCQACITANYESMIAKEMESRCPVCRIG---YQLENLR 68
Query: 81 PDHTLQDVRAKIFPLK 96
P+ + ++ KI +K
Sbjct: 69 PNRHVANIVEKINEIK 84
>gi|414870716|tpg|DAA49273.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 467
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V VK + + CPIC ++R T+ ECLH FCR+CI + E CP C
Sbjct: 87 FVPVKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTH-- 143
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 144 CASRRSLRDDPNYDALIAALYP 165
>gi|413919169|gb|AFW59101.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 497
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
VK I + CPIC ++R T+ ECLH FCR CI DK CP C C
Sbjct: 104 VKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH--CAS 160
Query: 76 LEKLRPDHTLQDVRAKIFP 94
LR D + A ++P
Sbjct: 161 RRSLRDDPNYDALIAALYP 179
>gi|432847544|ref|XP_004066075.1| PREDICTED: uncharacterized protein LOC101160962 [Oryzias latipes]
Length = 1887
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLR 80
I + CPICN L+ DA I C +++C +CI + D E C CN +
Sbjct: 253 IPDELLCPICNDLMTDAVVIPCCGNSYCDECIRTALLDSEEHICSSCN-------QSDVS 305
Query: 81 PDHTLQD--VRAKIFPLK---------RRKVKA---PEAVPSVTLPVRRKERSLSSLVVS 126
PD+ + + +R + K R++V+ P P + P+ +++ S
Sbjct: 306 PDNLIANKFLRQAVNNFKNETGYTKHGRKQVQQAVPPPPRPQLVRPLHSRQQDPLLANFS 365
Query: 127 APRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDGASSPETLNKLS 186
P ++ T + N +A + ST PP E S E N A++P +S
Sbjct: 366 NPPSTSTATTAPKTENLPVGTPSAF---SPSTPSPPHAEAASEEPNASPATAP-----VS 417
Query: 187 QNVKPMQSSSSAQPSQPISSKEKDNDA---EQCEGKSD 221
+ P+ SSS +P P E D + ++ GKS+
Sbjct: 418 DHHSPVHSSSQGEPPPPGEVDEADPEPAVKQESSGKSE 455
>gi|195444500|ref|XP_002069895.1| GK11322 [Drosophila willistoni]
gi|194165980|gb|EDW80881.1| GK11322 [Drosophila willistoni]
Length = 421
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEIITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|357529593|gb|AET80944.1| TRIM5 alpha [Oryctolagus cuniculus algirus]
Length = 489
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCVPLEKLR 80
+TCPIC LL + +I +C H+FC+ CI Y+ + +E+E CPVC I LE LR
Sbjct: 13 VTCPICLELLVEPLSI-DCGHSFCQACITANYESMIAKEMESRCPVCRIG---YQLENLR 68
Query: 81 PDHTLQDVRAKIFPLK 96
P+ + ++ KI +K
Sbjct: 69 PNRHVANIVEKINEIK 84
>gi|291236708|ref|XP_002738283.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 560
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNID 70
+K E I+ C C+ +LRD S C H FCR+CI ++SD + CCP+C +D
Sbjct: 18 LKDEHISQKCICTFCDHVLRDPFQ-SYCGHRFCRRCIEGQVSDGKEYCCPICVVD 71
>gi|297597780|ref|NP_001044517.2| Os01g0796700 [Oryza sativa Japonica Group]
gi|53792319|dbj|BAD53026.1| putative ring finger protein 1 [Oryza sativa Japonica Group]
gi|215767809|dbj|BAH00038.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619392|gb|EEE55524.1| hypothetical protein OsJ_03751 [Oryza sativa Japonica Group]
gi|255673777|dbj|BAF06431.2| Os01g0796700 [Oryza sativa Japonica Group]
Length = 489
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ VK I + CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 99 FIIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH-- 155
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 156 CASRRSLRDDPNYDALIAALYP 177
>gi|354507310|ref|XP_003515699.1| PREDICTED: tripartite motif-containing protein 30-like isoform 2
[Cricetulus griseus]
Length = 496
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIE- 62
MAS+ +++K+K E +TCPIC LLR+ I++C H+FCR CI Y+ +E E
Sbjct: 1 MASS-VLMKIKEE-----VTCPICLELLREPV-IADCDHSFCRDCITLNYESSKGKEEEG 53
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKER 118
CPVC + LRP+ + ++ +I K +PE V + + E+
Sbjct: 54 ICPVCRVTY---MFGHLRPNQHVANIVERITEFK----SSPEEEQKVNVCAQHGEK 102
>gi|226507818|ref|NP_001146078.1| uncharacterized LOC100279610 [Zea mays]
gi|219885587|gb|ACL53168.1| unknown [Zea mays]
gi|413919168|gb|AFW59100.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 475
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
VK I + CPIC ++R T+ ECLH FCR CI DK CP C C
Sbjct: 92 VKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH--CAS 148
Query: 76 LEKLRPDHTLQDVRAKIFP 94
LR D + A ++P
Sbjct: 149 RRSLRDDPNYDALIAALYP 167
>gi|195997493|ref|XP_002108615.1| hypothetical protein TRIADDRAFT_19102 [Trichoplax adhaerens]
gi|190589391|gb|EDV29413.1| hypothetical protein TRIADDRAFT_19102, partial [Trichoplax
adhaerens]
Length = 152
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
V + ++ + + CPIC +L+ T ECLH FC +CI + E CP C L
Sbjct: 21 VTISLRSLHSELMCPICLDILKSTMTTKECLHRFCAECITTALRSGNKE-CPTCRKKL-- 77
Query: 74 VPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQ 133
V LRPD + +KI+P R + +A + L + +L S R+ A
Sbjct: 78 VSRRSLRPDPNFDALISKIYP-NREEYEAQQEKVLARLNKHHSQHALQSSFEEGVRMQAT 136
Query: 134 TTMTRRRSNAA 144
+RS+
Sbjct: 137 NRSHSQRSSVC 147
>gi|426253031|ref|XP_004020205.1| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Ovis
aries]
Length = 277
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 134 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 176
>gi|354507308|ref|XP_003515698.1| PREDICTED: tripartite motif-containing protein 30-like isoform 1
[Cricetulus griseus]
Length = 496
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIE- 62
MAS+ +++K+K E +TCPIC LLR+ I++C H+FCR CI Y+ +E E
Sbjct: 1 MASS-VLMKIKEE-----VTCPICLELLREPV-IADCDHSFCRDCITLNYESSKGKEEEG 53
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKER 118
CPVC + LRP+ + ++ +I K +PE V + + E+
Sbjct: 54 ICPVCRVTY---MFGHLRPNQHVANIVERITEFK----SSPEEEQKVNVCAQHGEK 102
>gi|296472800|tpg|DAA14915.1| TPA: Polycomb group ring finger 6-like isoform 1 [Bos taurus]
Length = 276
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 133 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 175
>gi|75060786|sp|Q5D7H8.1|TRIM5_CALDO RecName: Full=Tripartite motif-containing protein 5; AltName:
Full=TRIM5alpha
gi|56480723|gb|AAV91990.1| TRIM5alpha [Callicebus donacophilus]
gi|157777547|gb|ABV69892.1| TRIM5alpha [Callicebus moloch]
gi|169402694|gb|ACA53503.1| tripartite motif-containing protein 5 (predicted) [Callicebus
moloch]
Length = 494
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 18/118 (15%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE---- 62
MAS ++V +K E +TCPIC LL + ++ +C H+FC+ CI + +
Sbjct: 1 MASR-ILVNIKEE-----VTCPICLELLTEPLSL-DCGHSFCQACITANHKESTLHQGER 53
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSL 120
CP+C I P E LRP+ L ++ ++ R V +PE V L R E+ L
Sbjct: 54 SCPLCRISY---PSENLRPNRHLANIVERL----REVVLSPEEGQKVDLCARHGEKLL 104
>gi|403335250|gb|EJY66800.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 642
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI--YDKISDE 59
R+E E NN + I + CP+C +L+D + CLH FC CI Y+++ +
Sbjct: 75 RLENEDFDNNEIDLKSFTDIKEILHCPVCLDILKDPLNVKMCLHKFCAHCIENYNRLIKK 134
Query: 60 EIECCPVCNIDLGCVPLEKLRPDHTL 85
+ CP C +G L LR D+ L
Sbjct: 135 Q---CPQCRKYIGSRRL--LRSDYKL 155
>gi|195120011|ref|XP_002004522.1| GI19979 [Drosophila mojavensis]
gi|193909590|gb|EDW08457.1| GI19979 [Drosophila mojavensis]
Length = 1449
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
TC IC + D TT+ C HT+CR CI + + CP C G + + LR D
Sbjct: 29 FTCHICRGYMIDPTTVDNCYHTYCRSCILKHLLRDVY--CPQCKSSGGKHISEDNLRSDD 86
Query: 84 TLQDVRAKIFP 94
TL+ + K+ P
Sbjct: 87 TLRALIYKLVP 97
>gi|218189663|gb|EEC72090.1| hypothetical protein OsI_05035 [Oryza sativa Indica Group]
Length = 258
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIK 387
+W +L AS DQ LPQI SYLRIKD N+ V + KYL KL L ++S ++++
Sbjct: 204 LWLTLQASPDQFREPILPQIPKSYLRIKDSNMKVEVVMKYLAGKLGL-TQSHLQVQ 258
>gi|345324019|ref|XP_001511967.2| PREDICTED: polycomb group RING finger protein 6-like
[Ornithorhynchus anatinus]
Length = 227
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 36 DATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDHTLQDVRAKI 92
DATTI+ECLHTFC+ CI CP CNI + PL +R D LQD+ K+
Sbjct: 23 DATTITECLHTFCKSCIVRHFYYSNR--CPKCNIVVHQTQPLYNIRLDRQLQDIVYKL 78
>gi|449463098|ref|XP_004149271.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 495
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ V+ I + CPIC +++ T+ ECLH FCR+CI DK CP C
Sbjct: 95 FIFVELSGIRKDVQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH-- 151
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 152 CASRRSLRDDPNYDALIAALYP 173
>gi|390358091|ref|XP_003729179.1| PREDICTED: tripartite motif-containing protein 5-like
[Strongylocentrotus purpuratus]
Length = 612
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI--YDK-ISDEEIECCPVC 67
+ K+K E + C+ CP+C +LR+AT +S C H+FCR C+ YDK + D CPVC
Sbjct: 1 MAAKLKEEKLQ-CLNCPLCLDVLRNATILS-CGHSFCRGCLEAYDKQLKDLNHIVCPVC 57
>gi|242058973|ref|XP_002458632.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
gi|241930607|gb|EES03752.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
Length = 472
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
VK I + CPIC ++R T+ ECLH FCR CI DK CP C C
Sbjct: 94 VKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH--CAS 150
Query: 76 LEKLRPDHTLQDVRAKIFP 94
LR D + A ++P
Sbjct: 151 RRSLRDDPKYDALIAALYP 169
>gi|159484474|ref|XP_001700281.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272448|gb|EDO98248.1| predicted protein [Chlamydomonas reinhardtii]
Length = 389
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
VK E + + +TC +C L+ + +S C H +C C++D + ++ CCP C + L +P
Sbjct: 60 VKLEAVKSHVTCALCTNLIASSLVLS-CGHQYCGSCLFDWLGNKP--CCPSCQVPLRAIP 116
Query: 76 LEKLRPDHTLQDVRAKI 92
+ + D ++ + +
Sbjct: 117 MRCIALDSIVEAFLSSL 133
>gi|159164147|pdb|2DJB|A Chain A, Solution Structure Of The Ring Domain Of The Human
Polycomb Group Ring Finger Protein 6
Length = 72
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 18 CSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 58
>gi|194907249|ref|XP_001981516.1| GG12099 [Drosophila erecta]
gi|190656154|gb|EDV53386.1| GG12099 [Drosophila erecta]
Length = 435
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|119570037|gb|EAW49652.1| polycomb group ring finger 6, isoform CRA_f [Homo sapiens]
Length = 175
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+ C IC L DATTI+ECLHTFC+ CI CP CNI
Sbjct: 32 ILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNR--CPKCNI 74
>gi|392349168|ref|XP_003750308.1| PREDICTED: polycomb group RING finger protein 2-like, partial
[Rattus norvegicus]
Length = 155
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+ C + D TTI ECLH+FC+ I + E + CP+C++ + PL +R D
Sbjct: 16 LMCALYGGYFIDTTTIVECLHSFCKTFIVRYL--ETNKYCPMCDVQVHKTGPLLSIRSDK 73
Query: 84 TLQDVRAKI 92
TLQD+ K+
Sbjct: 74 TLQDIVYKL 82
>gi|221053127|ref|XP_002257938.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193807770|emb|CAQ38475.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 528
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
TCPIC L+ D T++ C H+FC C+ I + I+ CP C
Sbjct: 258 YTCPICLCLIHDPVTLNSCFHSFCWNCLATAIQNYSIDKCPSC 300
>gi|195574396|ref|XP_002105175.1| GD18065 [Drosophila simulans]
gi|194201102|gb|EDX14678.1| GD18065 [Drosophila simulans]
Length = 436
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|195352923|ref|XP_002042960.1| GM16329 [Drosophila sechellia]
gi|194127025|gb|EDW49068.1| GM16329 [Drosophila sechellia]
Length = 434
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|17137804|ref|NP_477509.1| Sex combs extra [Drosophila melanogaster]
gi|50401702|sp|Q9VB08.1|RING1_DROME RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=Sex
comb extra protein; AltName: Full=dRING protein;
AltName: Full=dRING1
gi|7301619|gb|AAF56737.1| Sex combs extra [Drosophila melanogaster]
gi|16197987|gb|AAL13764.1| LD23953p [Drosophila melanogaster]
gi|220944852|gb|ACL84969.1| Sce-PA [synthetic construct]
gi|220952512|gb|ACL88799.1| Sce-PA [synthetic construct]
Length = 435
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|2388783|emb|CAA04797.1| DRING protein [Drosophila melanogaster]
Length = 435
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|195503706|ref|XP_002098764.1| GE10548 [Drosophila yakuba]
gi|194184865|gb|EDW98476.1| GE10548 [Drosophila yakuba]
Length = 439
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E+ +++ + V ++ + + CPIC +L+ T ECLH FC CI +
Sbjct: 21 RKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNK 80
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFP 94
E CP C L V LR D + +KI+P
Sbjct: 81 E-CPTCRKKL--VSKRSLRADPNFDLLISKIYP 110
>gi|344257597|gb|EGW13701.1| Tripartite motif-containing protein 30 [Cricetulus griseus]
Length = 269
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIE- 62
MAS+ +++K+K E +TCPIC LLR+ I++C H+FCR CI Y+ +E E
Sbjct: 1 MASS-VLMKIKEE-----VTCPICLELLREPV-IADCDHSFCRDCITLNYESSKGKEEEG 53
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKER 118
CPVC + LRP+ + ++ +I K +PE V + + E+
Sbjct: 54 ICPVCRVTY---MFGHLRPNQHVANIVERITEFK----SSPEEEQKVNVCAQHGEK 102
>gi|331229057|ref|XP_003327195.1| DNA repair protein rad16 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 968
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIECCPVCN----IDLGCV 74
+ + TC IC DA IS+C H FCR+CI Y + + E+ CPVC+ IDL
Sbjct: 729 LTSIQTCRICLDEAEDAI-ISKCRHIFCRECIRQYLETATEQEPECPVCHLPITIDLSQD 787
Query: 75 PLEKLRPDHTL-----QDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPR 129
LE D + Q V ++ P K R EA+ + + + ++ S+V S +
Sbjct: 788 ALE----DENMGSKARQGVLDRLDPGKWRTSTKIEALVEELSKLNQSDHTIKSIVFS--Q 841
Query: 130 VSAQTTMTRRRSNAAARKAAALRGS 154
+ + RR A K A L+G+
Sbjct: 842 FTVFLDLIERRLQLAGFKLARLQGN 866
>gi|317418600|emb|CBN80638.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 526
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
++CP+C+ + RD +S C H+FC+ C+ D ++ ++ CP+C
Sbjct: 9 LSCPVCHNIFRDPVVLS-CSHSFCKGCVQDWWREKRLQECPIC 50
>gi|236136|gb|AAB19925.1| Posterior Sex Combs (Psc) protein [Drosophila melanogaster,
Peptide Partial, 361 aa]
gi|228157|prf||1717393A Posterior Sex Combs gene
Length = 361
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 33 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAK-PNIKSDTT 89
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 90 LQAIVYKLVP 99
>gi|357529597|gb|AET80946.1| TRIM5 alpha [Lepus granatensis]
Length = 490
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCVPLEKLR 80
+TCPIC LL + +I +C H+FC+ CI Y+ + +E+E CPVC I LE LR
Sbjct: 13 VTCPICLELLVEPLSI-DCGHSFCQACITANYESMIAKEMESRCPVCRISY---QLENLR 68
Query: 81 PDHTLQDVRAKIFPLK 96
P+ + ++ K+ +K
Sbjct: 69 PNRHVANIVEKMNEIK 84
>gi|195380027|ref|XP_002048772.1| GJ21231 [Drosophila virilis]
gi|194143569|gb|EDW59965.1| GJ21231 [Drosophila virilis]
Length = 1440
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+TC IC + + TT+ C HT+CR CI + + CP C G + + LR D
Sbjct: 30 LTCRICQGYMIEPTTVDACYHTYCRSCILKHLLRDVY--CPQCKSSGGKHISEDNLRSDE 87
Query: 84 TLQDVRAKIFP-LKRRKVK 101
TL+ + K+ P L +R+ K
Sbjct: 88 TLRALIYKLVPGLYQRECK 106
>gi|449434332|ref|XP_004134950.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
gi|449479584|ref|XP_004155643.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 427
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDK---ISDEEIECCPVCNI 69
+ VK I + CPIC +++ T+ ECLH FCR+CI DK + ++E CP C
Sbjct: 51 FIAVKLSDIRKEVQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNKE---CPACRT 106
Query: 70 DLGCVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 107 H--CASRRSLRDDPNYDTLIAVLYP 129
>gi|357150625|ref|XP_003575522.1| PREDICTED: uncharacterized protein LOC100835560 [Brachypodium
distachyon]
Length = 229
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 333 WFSLVASEDQRGSLP-LPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVE 385
WF L A+++QR P LPQI SYLR++D + V + YL+ KL L +S+V+
Sbjct: 137 WFVLQAAQNQRTEPPPLPQIPRSYLRVRDGRMTVRLVMSYLVNKLGLEDDSQVK 190
>gi|354502452|ref|XP_003513300.1| PREDICTED: tripartite motif-containing protein 30-like [Cricetulus
griseus]
Length = 498
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 18/116 (15%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIE- 62
MAS+ ++VK+K E +TCPIC LLR+ + ++C H+FCR CI Y +E E
Sbjct: 1 MASS-VLVKIKEE-----VTCPICLELLREPVS-TDCDHSFCRACITLNYQSSKGKEEEG 53
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKER 118
CPVC + LRP+ + ++ +I K +PE V + + E+
Sbjct: 54 ICPVCQVTY---LFGNLRPNRQVANIVERITEFK----SSPEEEQKVNVCAQHGEK 102
>gi|156363522|ref|XP_001626092.1| predicted protein [Nematostella vectensis]
gi|156212955|gb|EDO33992.1| predicted protein [Nematostella vectensis]
Length = 877
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI--ECCPVCNIDLGCVPLEKLR 80
+ C IC+ LLRDA + CLHT+CR+CI D I + CP CN + +PL+ R
Sbjct: 143 LACGICHALLRDARVLP-CLHTYCRRCIEDIILHRQSVRAHCPSCNRE---IPLDSYR 196
>gi|344251233|gb|EGW07337.1| Tripartite motif-containing protein 30 [Cricetulus griseus]
Length = 503
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 18/116 (15%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIE- 62
MAS+ ++VK+K E +TCPIC LLR+ + ++C H+FCR CI Y +E E
Sbjct: 1 MASS-VLVKIKEE-----VTCPICLELLREPVS-TDCDHSFCRACITLNYQSSKGKEEEG 53
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKER 118
CPVC + LRP+ + ++ +I K +PE V + + E+
Sbjct: 54 ICPVCQVTY---LFGNLRPNRQVANIVERITEFK----SSPEEEQKVNVCAQHGEK 102
>gi|452820378|gb|EME27421.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 381
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDE-EIECCPVCNIDLGCVPLEKLRPDH 83
TCPIC + + T+ C HTFCR CI + + CPVC +LG P E +
Sbjct: 161 FTCPICLYVFYEPITL-RCSHTFCRSCISQAVYGPLNMNSCPVCRSELGLEPYE-FALNS 218
Query: 84 TLQDVRAKIFPLK 96
L + FPL
Sbjct: 219 LLTSIIEDAFPLH 231
>gi|357529595|gb|AET80945.1| TRIM5 alpha [Lepus granatensis]
Length = 490
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCVPLEKLR 80
+TCPIC LL + +I +C H+FC+ CI Y+ + +E+E CPVC I LE LR
Sbjct: 13 VTCPICLELLVEPLSI-DCGHSFCQACITANYESMIAKEMESRCPVCRISY---QLENLR 68
Query: 81 PDHTLQDVRAKIFPLK 96
P+ + ++ K+ +K
Sbjct: 69 PNRHVANIVEKMNEIK 84
>gi|311902103|gb|ADQ19603.1| TRIM5 alpha [Lepus europaeus]
Length = 490
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCVPLEKLR 80
+TCPIC LL + +I +C H+FC+ CI Y+ + +E+E CPVC I LE LR
Sbjct: 13 VTCPICLELLVEPLSI-DCGHSFCQACITANYESMIAKEMESRCPVCRISY---QLENLR 68
Query: 81 PDHTLQDVRAKIFPLK 96
P+ + ++ K+ +K
Sbjct: 69 PNRHVANIVEKMNEIK 84
>gi|403172771|ref|XP_003331917.2| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169990|gb|EFP87498.2| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1044
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIECCPVCN----IDLGCV 74
+ + TC IC DA IS+C H FCR+CI Y + + E+ CPVC+ IDL
Sbjct: 787 LTSIQTCRICLDEAEDAI-ISKCRHIFCRECIRQYLETATEQEPECPVCHLPITIDLSQD 845
Query: 75 PLEKLRPDHTL-----QDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPR 129
LE D + Q V ++ P K R EA+ + + + ++ S+V S +
Sbjct: 846 ALE----DENMGSKARQGVLDRLDPGKWRTSTKIEALVEELSKLNQSDHTIKSIVFS--Q 899
Query: 130 VSAQTTMTRRRSNAAARKAAALRGS 154
+ + RR A K A L+G+
Sbjct: 900 FTVFLDLIERRLQLAGFKLARLQGN 924
>gi|311902101|gb|ADQ19602.1| TRIM5 alpha [Lepus europaeus]
Length = 490
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCVPLEKLR 80
+TCPIC LL + +I +C H+FC+ CI Y+ + +E+E CPVC I LE LR
Sbjct: 13 VTCPICLELLVEPLSI-DCGHSFCQACITANYESMIAKEMESRCPVCRIS---YQLENLR 68
Query: 81 PDHTLQDVRAKIFPLK 96
P+ + ++ K+ +K
Sbjct: 69 PNRHVANIVEKMNEIK 84
>gi|109158141|pdb|2H0D|B Chain B, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 100
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI 61
R +E ++ L + V ++ + + CPIC +L++ T ECLH FC CI +
Sbjct: 12 RTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNK 71
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIF 93
E CP C L V LRPD + +KI+
Sbjct: 72 E-CPTCRKKL--VSKRSLRPDPNFDALISKIY 100
>gi|297598234|ref|NP_001045276.2| Os01g0928400 [Oryza sativa Japonica Group]
gi|57900104|dbj|BAD88166.1| unknown protein [Oryza sativa Japonica Group]
gi|255674024|dbj|BAF07190.2| Os01g0928400 [Oryza sativa Japonica Group]
Length = 283
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDL 378
+W +L AS DQ LPQI SYLRIKD N+ V + KYL KL L
Sbjct: 195 LWLTLQASPDQFREPILPQIPKSYLRIKDSNMKVEVVMKYLAGKLGL 241
>gi|255536761|ref|XP_002509447.1| ring finger protein, putative [Ricinus communis]
gi|223549346|gb|EEF50834.1| ring finger protein, putative [Ricinus communis]
Length = 418
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 71/176 (40%), Gaps = 25/176 (14%)
Query: 31 NTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHTLQDVRA 90
+ ++R T+ ECLH FCR+CI DK CP C C LR D + A
Sbjct: 44 DGIIRKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH--CASRRSLRDDPNYDALIA 100
Query: 91 KIFP------------LKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQTTMT- 137
++P + K + + S+T +RR+ +L R +A+ T+
Sbjct: 101 ALYPDIDKYEEEELAFHEEEKARNKQIQASITQTIRRQAEALGR-----KRTTAKATVAP 155
Query: 138 -RRRSNAAARKAAALRGSNLSTDKPPKKEEDSVED-NEDGASSPETLNKLSQNVKP 191
RR+ R A + N T + D +ED N DG + + S VKP
Sbjct: 156 FARRTQGRYRDAHSRGRRNYRT--ADLQGSDEIEDVNGDGGKDSSSAEEHSAEVKP 209
>gi|403167397|ref|XP_003889875.1| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166993|gb|EHS63302.1| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 787
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIECCPVCN----IDLGCV 74
+ + TC IC DA IS+C H FCR+CI Y + + E+ CPVC+ IDL
Sbjct: 530 LTSIQTCRICLDEAEDAI-ISKCRHIFCRECIRQYLETATEQEPECPVCHLPITIDLSQD 588
Query: 75 PLEKLRPDHTL-----QDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPR 129
LE D + Q V ++ P K R EA+ + + + ++ S+V S +
Sbjct: 589 ALE----DENMGSKARQGVLDRLDPGKWRTSTKIEALVEELSKLNQSDHTIKSIVFS--Q 642
Query: 130 VSAQTTMTRRRSNAAARKAAALRGS 154
+ + RR A K A L+G+
Sbjct: 643 FTVFLDLIERRLQLAGFKLARLQGN 667
>gi|325182454|emb|CCA16906.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEK-LRPDH 83
+TCPIC L+ + ECLH FC +CI K I+ CP C I +P ++ LR D
Sbjct: 81 LTCPICLGLINQTMVVMECLHRFCGECI-QKCLRLAIKECPSCRIH---IPSKRALRRDL 136
Query: 84 TLQDVRAKIFPLKRRKVKAPEA 105
+ A I+P R++ + EA
Sbjct: 137 NFDALIATIYP-NRQEFEQQEA 157
>gi|71043364|gb|AAZ20644.1| posterior sex combs [Drosophila melanogaster]
Length = 1601
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C + L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 261 IICHLYQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNA-KPNIKSDTT 317
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 318 LQAIVYKLVP 327
>gi|332845787|ref|XP_003315121.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Pan troglodytes]
Length = 951
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 12 LVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDL 71
L V+ R A +TCP CNT +DA +++C H FC +C+ + + + CP CN
Sbjct: 883 LTVQKLRRNPPARLTCPCCNTRKKDA-VLTKCFHVFCFECVRGRYEARQRK-CPKCNAAF 940
Query: 72 GCVPLEKL 79
G ++
Sbjct: 941 GAHDFHRI 948
>gi|157864938|ref|XP_001681177.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68124472|emb|CAJ02340.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 524
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 10 NNLVVKVKRET----IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCP 65
+ + ++K+ET I+A +TC +C ++ ++ C+H FC CI ++ E CP
Sbjct: 162 DYMFQRLKQETTRARISAELTCSVCKSIFHRPCSVLPCMHVFCAGCISGWMAQGEQHTCP 221
Query: 66 VCNIDLGCVPLEKLRPDHTLQDVRAKIF---PLKRRKVK 101
C V + +RP H LQ P RR V+
Sbjct: 222 KCR-----VSITDVRPTHRLQSCAENYLLASPASRRPVE 255
>gi|327286480|ref|XP_003227958.1| PREDICTED: tripartite motif-containing protein 35-like [Anolis
carolinensis]
Length = 500
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEE-IECCPVCNIDLGCVPLEKLRPDH 83
+ CPIC +DA T+ C H FC+ C+ + CPVC C P E LR +H
Sbjct: 24 LQCPICYEPFKDAATLC-CGHNFCKGCVSRSWEGQSRAHVCPVCKA--VCAP-EDLRTNH 79
Query: 84 TLQDVRAKIFPLKRR---KVKAPEAVPSVTLPVRRKERSLSSL 123
TL ++ + R K KA EA + P ++E L L
Sbjct: 80 TLVNIVEMFLKQEERQQQKKKAEEASCANLCPWHQEEAKLFCL 122
>gi|390363739|ref|XP_003730439.1| PREDICTED: uncharacterized protein LOC100889249
[Strongylocentrotus purpuratus]
Length = 739
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIE--CCPVC 67
+TCP+C + +AT ++ C HTFCRKC+ YD +S ++++ CP+C
Sbjct: 17 LTCPLCLGIFDEATILTSCGHTFCRKCLKNYD-LSHQDLDHMTCPLC 62
>gi|432116997|gb|ELK37566.1| E3 ubiquitin-protein ligase BRE1B [Myotis davidii]
Length = 1012
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN+ G ++
Sbjct: 955 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVQGRYEARQRK-CPKCNVAFGAHDFHRI 1009
>gi|443687721|gb|ELT90613.1| hypothetical protein CAPTEDRAFT_170143 [Capitella teleta]
Length = 409
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLRPDH 83
+ C +C AT I+ECLHTFC+ CI + E CPVC+ + P LR D+
Sbjct: 16 LICVLCGGYFISATAITECLHTFCKDCIVRYL--ETSIYCPVCDTLVHKTKPTLCLRRDN 73
Query: 84 TLQDVRAKIFP 94
QD+ K+ P
Sbjct: 74 ATQDLVYKLVP 84
>gi|321257783|ref|XP_003193708.1| mRNA polyadenylation-related protein [Cryptococcus gattii WM276]
gi|317460178|gb|ADV21921.1| mRNA polyadenylation-related protein, putative [Cryptococcus gattii
WM276]
Length = 598
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 18 RETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP-L 76
+E + A +TCP+C L+ +A C FC +C+ + D + E CP C VP L
Sbjct: 315 QEPLEADLTCPLCKKLVWEAVRTPCCSTAFCEECVQTYLVDHDFE-CPHCESK---VPSL 370
Query: 77 EKLRPDHTLQDVRAKIF 93
++L+PD L+ R++I+
Sbjct: 371 DRLKPDEDLRK-RSRIY 386
>gi|156093978|ref|XP_001613027.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801901|gb|EDL43300.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 559
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
CPIC L+ D T++ C H+FC C+ I I+ CP C
Sbjct: 267 CPICLCLIHDPVTLNSCFHSFCWNCLATAIQKYSIDSCPSC 307
>gi|242039065|ref|XP_002466927.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
gi|241920781|gb|EER93925.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
Length = 207
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDK---ISDEEIECCPVCNIDLGCVPLEKLRP 81
+ CPIC ++R T+ ECLH FCR+CI DK + + E CP C C LR
Sbjct: 39 VQCPICLGIIRKTRTVMECLHRFCRECI-DKSMRLGNNE---CPACRTH--CASRRSLRD 92
Query: 82 DHTLQDVRAKIFP 94
D + A ++P
Sbjct: 93 DPNYDALIAALYP 105
>gi|226496665|ref|NP_001147987.1| ribosomal protein L11 methyltransferase containing protein [Zea
mays]
gi|194707960|gb|ACF88064.1| unknown [Zea mays]
gi|195614998|gb|ACG29329.1| ribosomal protein L11 methyltransferase containing protein [Zea
mays]
Length = 494
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+V V++E + CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 109 LVDVRKE-----VQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH-- 160
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + ++P
Sbjct: 161 CASRRSLRDDPNYDALILALYP 182
>gi|348559172|ref|XP_003465390.1| PREDICTED: tripartite motif-containing protein 6-like [Cavia
porcellus]
Length = 594
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDK-----ISDEEIECCPVCNIDLGCVPLEKL 79
+TCPIC LL + +I +C H+FC+ CI + I EE CPVC + L
Sbjct: 119 VTCPICLELLTEPLSI-DCGHSFCQACIAENTEKSVIGQEEESSCPVCQTS---YQPQHL 174
Query: 80 RPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKER 118
RP+ L ++ ++ R V PE +V L + E+
Sbjct: 175 RPNRHLANIAERL----REVVLGPERQTTVILCAQHGEK 209
>gi|409044934|gb|EKM54415.1| hypothetical protein PHACADRAFT_258246 [Phanerochaete carnosa
HHB-10118-sp]
Length = 811
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 21 IAACMT---CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLE 77
+ CMT C C +R+ T I++C+H+FCR C+ ++I + + CP CN+ ++
Sbjct: 749 VEKCMTILKCSTCRMNMRN-TVITKCMHSFCRNCVNERIQSRQRK-CPACNLPFSQGEVQ 806
Query: 78 KL 79
+L
Sbjct: 807 QL 808
>gi|302143319|emb|CBI21880.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CPIC +++ T+ ECLH FCR+CI DK CP C C LR D
Sbjct: 179 VQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH--CASRRSLRDDPN 235
Query: 85 LQDVRAKIFP 94
+ A ++P
Sbjct: 236 YDALIAALYP 245
>gi|195027950|ref|XP_001986845.1| GH20310 [Drosophila grimshawi]
gi|193902845|gb|EDW01712.1| GH20310 [Drosophila grimshawi]
Length = 1536
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
MTC IC + + TT+ C HT+CR CI + + CP C G + + LR D
Sbjct: 35 MTCRICQGYMIEPTTVDYCYHTYCRSCILKHLLRDVY--CPQCKGSGGKQISEDNLRSDD 92
Query: 84 TLQDVRAKIFP 94
T++ + K+ P
Sbjct: 93 TMRALIYKLVP 103
>gi|395332997|gb|EJF65375.1| BRE1-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 807
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 21 IAACMT---CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
+A CM C C +R+ T I++C+HTFC++C+ +IS + + CP CN+
Sbjct: 745 LAKCMELLKCSTCQINMRN-TVITKCMHTFCKQCVDARISTRQRK-CPACNL 794
>gi|351709196|gb|EHB12115.1| Tripartite motif-containing protein 6, partial [Heterocephalus
glaber]
Length = 485
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDK----ISDEEIECCPVCNIDLGCVPLEKLR 80
+TCPIC LL + +I +C H+FC+ CI + + +E CPVC P LR
Sbjct: 13 VTCPICLELLTEPLSI-DCGHSFCQACIIENSKKSATSQEESSCPVCQTSYH--P-RNLR 68
Query: 81 PDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKER 118
P+ L ++ ++ R V P P V L VR E+
Sbjct: 69 PNRHLANIAERL----REVVLGPRNQPQVILCVRHGEK 102
>gi|242088361|ref|XP_002440013.1| hypothetical protein SORBIDRAFT_09g024430 [Sorghum bicolor]
gi|241945298|gb|EES18443.1| hypothetical protein SORBIDRAFT_09g024430 [Sorghum bicolor]
Length = 449
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+V V++E + CPIC ++R T+ ECLH FCR CI DK CP C
Sbjct: 112 LVDVRKE-----VQCPICLGIIRKTRTVMECLHRFCRDCI-DKSMRLGNNECPACRTH-- 163
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + ++P
Sbjct: 164 CASRRSLRDDPNYDALILALYP 185
>gi|393217372|gb|EJD02861.1| hypothetical protein FOMMEDRAFT_134051 [Fomitiporia mediterranea
MF3/22]
Length = 829
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
+ C +C +R+ T I++C+HTFC+ C+ +IS + + CP CN+ ++ L
Sbjct: 774 LKCSLCQNHMRN-TVITKCMHTFCKVCVDARISSRQRK-CPACNLAFALSEVQAL 826
>gi|344306461|ref|XP_003421906.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31-like [Loxodonta
africana]
Length = 559
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI-YDKISDEEIECCP 65
MAS V ++ E I CPIC +L+DA TI +C H+FC CI + + + + CP
Sbjct: 1 MASPQFVSNLQEEVI-----CPICIDILQDAVTI-DCGHSFCLSCISWTQDPSDGLLKCP 54
Query: 66 VCNIDLGCVPLEKLRPDHTLQDVRAKI 92
+C V + LRP+ L ++ KI
Sbjct: 55 LCKKS---VRKDTLRPNWLLMNLVEKI 78
>gi|402223732|gb|EJU03796.1| DWNN-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 560
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 14/77 (18%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
CP+C+ L R+AT C T+C +CI + + + CP C+ +G L++L PD
Sbjct: 316 FACPVCSKLFREATRTPCCGATYCEECIQTHLLEHDF-VCPSCSKRIGS--LDRLEPDSE 372
Query: 85 LQDVRAKIFPLKRRKVK 101
+ RRKVK
Sbjct: 373 M-----------RRKVK 378
>gi|313229073|emb|CBY18225.1| unnamed protein product [Oikopleura dioica]
Length = 929
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 17 KRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPL 76
++E + + CPICN L++DA C T+C CI K+ + + CP C L P+
Sbjct: 215 EKEEVPDELCCPICNELIQDARKTPCCSSTYCNNCITQKLLESDDGLCPKCKKPLK--PV 272
Query: 77 EKLRPDHTLQD 87
E L D L+D
Sbjct: 273 EMLE-DKVLKD 282
>gi|344309421|ref|XP_003423375.1| PREDICTED: tripartite motif-containing protein 5-like [Loxodonta
africana]
Length = 562
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI-----YDKISDEEI 61
MAS +VVK++ E +TCPIC LLR+ ++ +C H+FC+ CI +S E
Sbjct: 37 MASA-IVVKLQEE-----VTCPICLELLREPLSL-DCGHSFCQACITVNSKTSMVSSEGE 89
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKI 92
CP+C I + LRP+ L ++ K+
Sbjct: 90 STCPMCRIKYQA---DNLRPNQHLANIVEKL 117
>gi|336371344|gb|EGN99683.1| hypothetical protein SERLA73DRAFT_167589 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384095|gb|EGO25243.1| hypothetical protein SERLADRAFT_448242 [Serpula lacrymans var.
lacrymans S7.9]
Length = 810
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 ETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
E + + + C C R +T I++C+HTFC++C+ +IS + + CP CN+
Sbjct: 749 EKLMSVLKCSTCKERFR-STVITKCMHTFCKECVDARISTRQRK-CPTCNLSFA 800
>gi|443732304|gb|ELU17075.1| hypothetical protein CAPTEDRAFT_201428 [Capitella teleta]
Length = 344
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN 68
CPIC +L++A I C ++FC CI D + D E CP C
Sbjct: 240 FKCPICREMLKEAAIIRCCGYSFCDDCIRDALLDSEHHTCPQCG 283
>gi|351709198|gb|EHB12117.1| Tripartite motif-containing protein 5 [Heterocephalus glaber]
Length = 481
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 14/86 (16%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIY----DKISDEEIE 62
MAS+ ++V+VK E +TCPIC LL++ + ++C H+FC+ CI + ++ +
Sbjct: 1 MASS-VLVEVKEE-----VTCPICLELLKEPVS-TDCGHSFCKLCITANCGSSVHEQGVS 53
Query: 63 CCPVCNIDLGCVPLEKLRPDHTLQDV 88
CPVC + E LRP+ + ++
Sbjct: 54 SCPVCRVTF---QFESLRPNRHVANI 76
>gi|332262966|ref|XP_003280528.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Nomascus leucogenys]
Length = 945
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
V ++ A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 881 VSKDAEKARLTCPCCNTRKKDA-VLTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHD 938
Query: 76 LEKL 79
++
Sbjct: 939 FHRI 942
>gi|432878524|ref|XP_004073351.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Oryzias latipes]
Length = 1024
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CN+ ++DA +++C H FC +C+ + D CP CN G ++
Sbjct: 967 ARLTCPCCNSRVKDAV-LTKCFHVFCFECVKTRY-DTRQRKCPKCNAAFGANDFHRI 1021
>gi|359485403|ref|XP_002274885.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Vitis vinifera]
Length = 412
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CPIC +++ T+ ECLH FCR+CI DK CP C C LR D
Sbjct: 23 VQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH--CASRRSLRDDPN 79
Query: 85 LQDVRAKIFP 94
+ A ++P
Sbjct: 80 YDALIAALYP 89
>gi|296195257|ref|XP_002745312.1| PREDICTED: tripartite motif-containing protein 60-like [Callithrix
jacchus]
Length = 460
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 26 TCPICNTLLRDATTISECLHTFCRKCIYDKISD-EEIECCPVCNIDLGCVPLEKLRPD-- 82
+CPIC L+D T + C H FCR CI+ D ++I CPVC L P E LR +
Sbjct: 15 SCPICLGYLKDPVT-THCGHNFCRSCIHQCWEDLQDIFPCPVC---LHHCPEENLRSNTQ 70
Query: 83 -HTLQDVRAKIFPLKRRKVKAPEAVP 107
+ DV ++ ++R++ + EA P
Sbjct: 71 FRHMTDVVQQLPAMRRKRKRQEEAEP 96
>gi|47215543|emb|CAG06273.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1038
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CN+ ++DA +++C H FC +C+ + D CP CN G ++
Sbjct: 981 ARLTCPCCNSRVKDAV-LTKCFHVFCFECVKTRY-DTRQRKCPKCNAAFGANDFHRI 1035
>gi|224133478|ref|XP_002328052.1| predicted protein [Populus trichocarpa]
gi|222837461|gb|EEE75840.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V V+ I + CPIC +++ T+ ECLH FCR+CI DK CP C
Sbjct: 119 FVFVELPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRMGNNECPACRTH-- 175
Query: 73 CVPLEKLRPDHTLQDVRAKIFP 94
C LR D + A ++P
Sbjct: 176 CASRRSLRDDPNYDALIAALYP 197
>gi|390360007|ref|XP_003729610.1| PREDICTED: uncharacterized protein LOC100892087
[Strongylocentrotus purpuratus]
Length = 762
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIE--CCPVC 67
+TCP+C + +AT ++ C HTFCRKC+ YD +S ++++ CP+C
Sbjct: 17 LTCPLCLDIFDEATILTSCGHTFCRKCLKNYD-LSHQDLDHMICPLC 62
>gi|194387134|dbj|BAG59933.1| unnamed protein product [Homo sapiens]
Length = 693
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 636 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 690
>gi|348514299|ref|XP_003444678.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Oreochromis
niloticus]
Length = 998
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CN+ ++DA +++C H FC +C+ + D CP CN G ++
Sbjct: 941 ARLTCPCCNSRVKDAV-LTKCFHVFCFECVKTRY-DTRQRKCPKCNAAFGANDFHRI 995
>gi|443684594|gb|ELT88488.1| hypothetical protein CAPTEDRAFT_200403 [Capitella teleta]
Length = 308
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN 68
CPIC +L++A I C ++FC CI D + D E CP C
Sbjct: 204 FKCPICREMLKEAAIIRCCGYSFCDDCIRDALLDSEHHTCPQCG 247
>gi|47227694|emb|CAG09691.1| unnamed protein product [Tetraodon nigroviridis]
Length = 709
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 8 ASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
A N V K + + +TC IC LL D ++ C+H FC C + E CP C
Sbjct: 249 AVRNNVDGTKTDKMEESLTCVICQDLLHDCISLQPCMHVFCAACYSGWM--ERSSLCPTC 306
Query: 68 NIDLGCVPLEKLRPDHTLQDV 88
P+E++R +H L ++
Sbjct: 307 R-----CPVERIRKNHILNNL 322
>gi|405955155|gb|EKC22380.1| Protein deltex-3-like protein [Crassostrea gigas]
Length = 1259
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 25 MTCPIC-NTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+TC +C +T + D + +C H FCR CI D S + I CPVCN G
Sbjct: 1076 LTCVVCMDTEMEDPVMLKKCHHQFCRNCIEDYFSHKPI--CPVCNTVYG 1122
>gi|28175093|gb|AAH30802.2| Similar to ring finger protein 40, partial [Homo sapiens]
Length = 661
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 604 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 658
>gi|405961802|gb|EKC27547.1| ADP-ribosylation factor [Crassostrea gigas]
Length = 1098
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN 68
I + + CPIC + A + EC HTFC CI +S CP CN
Sbjct: 180 IDSLLRCPICYDFMHTAMILPECSHTFCSFCIRQHLS--HTNQCPACN 225
>gi|327283207|ref|XP_003226333.1| PREDICTED: e3 ubiquitin-protein ligase CHFR-like [Anolis
carolinensis]
Length = 637
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
VV VK + + +TC IC LL D ++ C+HTFC C + + CP C
Sbjct: 267 VVNVKPDKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSL--CPTCR---- 320
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSV 109
P+E++ +H L ++ K + E + S+
Sbjct: 321 -CPVERICKNHILNNLVEAYLTQHPDKCRNDEDIKSM 356
>gi|410913859|ref|XP_003970406.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Takifugu rubripes]
Length = 1016
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CN+ ++DA +++C H FC +C+ + D CP CN G ++
Sbjct: 959 ARLTCPCCNSRVKDAV-LTKCFHVFCFECVKTRY-DTRQRKCPKCNAAFGANDFHRI 1013
>gi|323457144|gb|EGB13010.1| hypothetical protein AURANDRAFT_60753 [Aureococcus anophagefferens]
Length = 539
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 19 ETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEK 78
+ +A+ TC +C +L + + C H FC +C+ DE I CP C VP K
Sbjct: 276 DALASATTCRLCENVLDEDLSCLPCGHCFCTECVLVACVDEYI--CPECR-----VPFFK 328
Query: 79 --LRPDHTLQD-----VRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVS 126
+ P++ ++D V A F L R A V SV P+RR + L+++ V+
Sbjct: 329 SDITPNYAMRDFARAAVSAAGFALAARWGDATHLVSSV--PLRRTPKLLTAVSVA 381
>gi|426254595|ref|XP_004020962.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Ovis aries]
Length = 901
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 892
>gi|440911762|gb|ELR61398.1| E3 ubiquitin-protein ligase BRE1B [Bos grunniens mutus]
Length = 1002
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 945 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 993
>gi|390347366|ref|XP_003726763.1| PREDICTED: uncharacterized protein LOC100888970
[Strongylocentrotus purpuratus]
Length = 631
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIE--CCPVC 67
+TCP+C + +AT ++ C HTFCRKC+ YD +S ++++ CP+C
Sbjct: 17 LTCPLCLDIFDEATILTSCGHTFCRKCLKNYD-LSHQDLDHMICPLC 62
>gi|410984766|ref|XP_003998697.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Felis catus]
Length = 1001
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|354479128|ref|XP_003501765.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 1 [Cricetulus
griseus]
Length = 663
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V VK + + +TC IC LL D ++ C+HTFC C + E CP C
Sbjct: 289 VASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWM--ERSSLCPTCR---- 342
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSV 109
P+E++ +H L ++ K ++ E V S+
Sbjct: 343 -CPVERICKNHILNNLVEAYLIQHPDKCRSEEDVRSM 378
>gi|313239220|emb|CBY14175.1| unnamed protein product [Oikopleura dioica]
Length = 200
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 15/139 (10%)
Query: 15 KVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
K+ + + ++C C L + T I EC HTFCR CI DE CP C I++
Sbjct: 12 KILLRDLNSVISCSFCKGYLVEPTVIPECSHTFCRTCILRHFQDELD--CPECGIEV--- 66
Query: 75 PLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSLVVSAPRVSAQT 134
H Q + I+ ++ E +P++ V+ ++ S + V P+ +
Sbjct: 67 --------HPTQPEKCIIYDEVLNQILC-ELIPNLAQRVQDEKDSFTE-VDKIPKFLVRF 116
Query: 135 TMTRRRSNAAARKAAALRG 153
T R+SN+ R + G
Sbjct: 117 KPTDRKSNSLPRPYILING 135
>gi|292610346|ref|XP_002660701.1| PREDICTED: zinc-binding protein A33-like [Danio rerio]
Length = 507
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
++C +C + RD + C H+FCR+CIYD S CP+C
Sbjct: 7 LSCAVCTDVFRDPVLLG-CGHSFCRQCIYDHWSSSGTRNCPIC 48
>gi|345801553|ref|XP_848895.2| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Canis lupus
familiaris]
Length = 1000
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 943 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 991
>gi|330340457|ref|NP_001193381.1| E3 ubiquitin-protein ligase BRE1B [Bos taurus]
gi|296473193|tpg|DAA15308.1| TPA: ring finger protein 40 [Bos taurus]
Length = 1001
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|301778801|ref|XP_002924807.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B-like [Ailuropoda
melanoleuca]
gi|281352711|gb|EFB28295.1| hypothetical protein PANDA_014222 [Ailuropoda melanoleuca]
Length = 1001
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|66392211|ref|NP_001018156.1| uncharacterized protein LOC553197 [Danio rerio]
gi|63102165|gb|AAH95360.1| Zgc:110667 [Danio rerio]
Length = 507
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
++C +C + RD + C H+FCR+CIYD S CP+C
Sbjct: 7 LSCAVCTDVFRDPVLLG-CGHSFCRQCIYDHWSSSGTRNCPIC 48
>gi|363735972|ref|XP_422114.3| PREDICTED: E3 ubiquitin-protein ligase DTX3L [Gallus gallus]
Length = 594
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 26 TCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV 74
TCPIC + D +++C H FC+ CI K + E + CPVCN G V
Sbjct: 414 TCPICMEKIVDKEILTKCKHVFCKSCI--KKALEYKQTCPVCNTVYGLV 460
>gi|228156|prf||1717392B Posterior Sex Combs gene
Length = 235
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ C +C L +ATTI ECLH+FC C+ + + E CP C + + ++ D T
Sbjct: 16 IICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPRCEMVINNAK-PNIKSDTT 72
Query: 85 LQDVRAKIFP 94
LQ + K+ P
Sbjct: 73 LQAIVYKLVP 82
>gi|10176883|dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana]
Length = 486
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYD--KISDEEIECCPVCNIDLGCVPLEKLRPD 82
+ CPIC +++ T+ ECLH FCR+CI ++ + E CP C C LR D
Sbjct: 134 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRKH--CASRRSLRDD 188
Query: 83 HTLQDVRAKIF 93
+ A +F
Sbjct: 189 PKFDALIAALF 199
>gi|426254593|ref|XP_004020961.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Ovis aries]
Length = 1001
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|34364873|emb|CAE45869.1| hypothetical protein [Homo sapiens]
Length = 727
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 670 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 724
>gi|218197034|gb|EEC79461.1| hypothetical protein OsI_20471 [Oryza sativa Indica Group]
Length = 451
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 69/186 (37%), Gaps = 30/186 (16%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
+ VK I + CPIC ++R T+ ECLH FCR CI + E CP C
Sbjct: 100 FILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNE-CPACRTH-- 156
Query: 73 CVPLEKLRPDHTLQDVRAKIFP-----------------LKRRKVKAPEAVPSVTLPVRR 115
C LR D + ++P + +K++A S+ RR
Sbjct: 157 CASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKKIQA-----SIAETFRR 211
Query: 116 KERSLSSLVVSAPRVSAQTTMTRRRSNAAARKAAALRGSNLSTDKPPKKEEDSVEDNEDG 175
+ +L S + + T R R N A++ RG S D ED D
Sbjct: 212 QSEALVK-KRSVAKATGSTITRRTRGNMRAKR----RGRTSSPDIVATDNEDEDRDENGN 266
Query: 176 ASSPET 181
S E+
Sbjct: 267 EGSKES 272
>gi|302813862|ref|XP_002988616.1| hypothetical protein SELMODRAFT_427264 [Selaginella moellendorffii]
gi|300143723|gb|EFJ10412.1| hypothetical protein SELMODRAFT_427264 [Selaginella moellendorffii]
Length = 234
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 329 NGPIWFSLVASEDQ-RGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEVEIK 387
NG +WF+L + +Q R I + Y+RI R +P+ ++KY+ KL+L +E++VE+
Sbjct: 42 NG-VWFALKPAANQLRVRTRCFPIITPYVRITGRQLPILLVKKYIATKLNLGNETDVELN 100
Query: 388 CMG 390
C G
Sbjct: 101 CRG 103
>gi|348550700|ref|XP_003461169.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like isoform 1 [Cavia
porcellus]
Length = 662
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
VK + +A +TC IC LL D ++ C+HTFC C + E CP C P
Sbjct: 291 VKTDKMAETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWM--ERSSLCPTCR-----CP 343
Query: 76 LEKLRPDHTLQDV 88
+E++ +H L ++
Sbjct: 344 VERICKNHILNNL 356
>gi|50949948|emb|CAH10518.1| hypothetical protein [Homo sapiens]
Length = 1001
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|348550702|ref|XP_003461170.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like isoform 2 [Cavia
porcellus]
Length = 651
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
VK + +A +TC IC LL D ++ C+HTFC C + E CP C P
Sbjct: 279 VKTDKMAETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWM--ERSSLCPTCR-----CP 331
Query: 76 LEKLRPDHTLQDV 88
+E++ +H L ++
Sbjct: 332 VERICKNHILNNL 344
>gi|335284373|ref|XP_003354586.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
BRE1B-like [Sus scrofa]
Length = 1021
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 964 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 1012
>gi|333440440|ref|NP_001193962.1| E3 ubiquitin-protein ligase BRE1B isoform 2 [Homo sapiens]
gi|158256764|dbj|BAF84355.1| unnamed protein product [Homo sapiens]
Length = 1000
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 943 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 997
>gi|426381893|ref|XP_004057565.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Gorilla
gorilla gorilla]
Length = 1000
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 943 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 997
>gi|354479130|ref|XP_003501766.1| PREDICTED: E3 ubiquitin-protein ligase CHFR isoform 2 [Cricetulus
griseus]
Length = 652
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 13 VVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG 72
V VK + + +TC IC LL D ++ C+HTFC C + E CP C
Sbjct: 277 VASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWM--ERSSLCPTCR---- 330
Query: 73 CVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPSV 109
P+E++ +H L ++ K ++ E V S+
Sbjct: 331 -CPVERICKNHILNNLVEAYLIQHPDKCRSEEDVRSM 366
>gi|344294403|ref|XP_003418907.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2
[Loxodonta africana]
Length = 901
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 892
>gi|7662230|ref|NP_055586.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Homo sapiens]
gi|13543994|gb|AAH06133.1| Ring finger protein 40 [Homo sapiens]
gi|15079968|gb|AAH11769.1| Ring finger protein 40 [Homo sapiens]
gi|17391423|gb|AAH18647.1| Ring finger protein 40 [Homo sapiens]
gi|119572582|gb|EAW52197.1| ring finger protein 40, isoform CRA_a [Homo sapiens]
gi|119572585|gb|EAW52200.1| ring finger protein 40, isoform CRA_a [Homo sapiens]
gi|123993535|gb|ABM84369.1| ring finger protein 40 [synthetic construct]
gi|124000569|gb|ABM87793.1| ring finger protein 40 [synthetic construct]
gi|168267490|dbj|BAG09801.1| E3 ubiquitin-protein ligase BRE1B [synthetic construct]
Length = 1001
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|426381895|ref|XP_004057566.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Gorilla
gorilla gorilla]
Length = 1001
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|197098878|ref|NP_001125651.1| E3 ubiquitin-protein ligase BRE1B [Pongo abelii]
gi|75061874|sp|Q5RAU7.1|BRE1B_PONAB RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40
gi|55728748|emb|CAH91113.1| hypothetical protein [Pongo abelii]
Length = 1001
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|207080094|ref|NP_001128807.1| DKFZP459F026 protein [Pongo abelii]
gi|55729081|emb|CAH91277.1| hypothetical protein [Pongo abelii]
Length = 961
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 904 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 958
>gi|397471938|ref|XP_003807521.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Pan
paniscus]
gi|410224050|gb|JAA09244.1| ring finger protein 40 [Pan troglodytes]
gi|410265686|gb|JAA20809.1| ring finger protein 40 [Pan troglodytes]
gi|410354903|gb|JAA44055.1| ring finger protein 40 [Pan troglodytes]
Length = 1001
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|344294401|ref|XP_003418906.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1
[Loxodonta africana]
Length = 1001
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|443690859|gb|ELT92877.1| hypothetical protein CAPTEDRAFT_204924 [Capitella teleta]
Length = 359
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 14 VKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN 68
++VK+E I CPIC +L++A I C ++FC +CI D + D E CP C
Sbjct: 235 MEVKKE-IPDEFKCPICREMLKEAAIIRCCGYSFCDECIRDALLDSEHHTCPQCG 288
>gi|417405562|gb|JAA49490.1| Putative e3 ubiquitin ligase involved in syntaxin degradation
[Desmodus rotundus]
Length = 1000
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 943 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 991
>gi|357529599|gb|AET80947.1| TRIM5 alpha [Sylvilagus bachmani]
Length = 489
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCVPLEKLR 80
+TCPIC LL + +I +C H+FC+ CI Y+ + +E+E CPVC I LE LR
Sbjct: 13 VTCPICLELLVEPLSI-DCGHSFCQACITANYESMIAKEMESRCPVCRIG---YQLENLR 68
Query: 81 PDHTLQDVRAKIFPLK 96
+ + ++ KI +K
Sbjct: 69 SNRHVANIVEKINEIK 84
>gi|313104295|sp|O75150.4|BRE1B_HUMAN RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=95 kDa retinoblastoma-associated protein;
Short=RBP95; AltName: Full=RING finger protein 40
Length = 1001
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|402908152|ref|XP_003916818.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Papio
anubis]
Length = 901
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 898
>gi|30584681|gb|AAP36593.1| Homo sapiens ring finger protein 40 [synthetic construct]
gi|60653785|gb|AAX29586.1| ring finger protein 40 [synthetic construct]
gi|60653787|gb|AAX29587.1| ring finger protein 40 [synthetic construct]
Length = 1002
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|395501900|ref|XP_003755326.1| PREDICTED: polycomb group RING finger protein 5-like [Sarcophilus
harrisii]
Length = 70
Score = 46.6 bits (109), Expect = 0.025, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCV-PLEKLR 80
+TC IC L TT++ECLHTFC+ CI D CP C + PLE LR
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSND--CPKCGNQVHETNPLEMLR 70
>gi|403276880|ref|XP_003930110.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 901
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 898
>gi|338712880|ref|XP_001495920.3| PREDICTED: e3 ubiquitin-protein ligase BRE1B isoform 1 [Equus
caballus]
Length = 1001
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|242085490|ref|XP_002443170.1| hypothetical protein SORBIDRAFT_08g014181 [Sorghum bicolor]
gi|241943863|gb|EES17008.1| hypothetical protein SORBIDRAFT_08g014181 [Sorghum bicolor]
Length = 212
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 333 WFSLVASEDQRGSLPLPQISSSYLRI-KDRNIPVSFIQKYLMMKLDLPSESE 383
WF L A+++QR PLPQI SYLR+ +D + V + +YL+ KL L +S+
Sbjct: 161 WFLLRAAQNQRREPPLPQIPRSYLRVSRDGRMTVRVVMRYLVNKLGLDDDSQ 212
>gi|109514763|ref|XP_001059102.1| PREDICTED: polycomb group RING finger protein 2-like [Rattus
norvegicus]
Length = 331
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLG-CVPLEKLRPDH 83
+ C + + TTI ECLH+FC+ I + E + CP+C++ + PL +R D
Sbjct: 16 LMCALYGGYFINTTTIVECLHSFCKTFIVRYL--ETNKYCPMCDVQVHKTGPLLSIRSDK 73
Query: 84 TLQDVRAKI 92
TLQD+ K+
Sbjct: 74 TLQDIVYKL 82
>gi|14042062|dbj|BAB55092.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 898
>gi|403276878|ref|XP_003930109.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Saimiri
boliviensis boliviensis]
gi|403276882|ref|XP_003930111.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 3 [Saimiri
boliviensis boliviensis]
Length = 1001
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|395846336|ref|XP_003795864.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Otolemur garnettii]
Length = 727
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 670 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 724
>gi|390338415|ref|XP_003724773.1| PREDICTED: uncharacterized protein LOC100891735, partial
[Strongylocentrotus purpuratus]
Length = 627
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIE--CCPVC 67
+TCP+C + +AT ++ C HTFCRKC+ YD +S ++++ CP+C
Sbjct: 17 LTCPLCLGIFDEATILTSCGHTFCRKCLKNYD-LSHQDLDHMICPLC 62
>gi|384950604|gb|AFI38907.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Macaca mulatta]
Length = 1001
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|149067705|gb|EDM17257.1| ring finger protein 40, isoform CRA_b [Rattus norvegicus]
Length = 668
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 611 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 659
>gi|371874078|ref|NP_001243104.1| E3 ubiquitin-protein ligase BRE1A [Danio rerio]
Length = 1013
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CN+ ++DA +++C H FC +C+ + D CP CN G ++
Sbjct: 956 ARLTCPCCNSRVKDAV-LTKCFHVFCFECVKTRY-DTRQRKCPKCNAAFGANDFHRI 1010
>gi|397471940|ref|XP_003807522.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Pan
paniscus]
Length = 901
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 898
>gi|395514876|ref|XP_003761637.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Sarcophilus
harrisii]
Length = 914
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 857 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 905
>gi|338712882|ref|XP_003362789.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B isoform 2 [Equus
caballus]
Length = 901
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 892
>gi|302565348|ref|NP_001181143.1| E3 ubiquitin-protein ligase BRE1B [Macaca mulatta]
gi|355710137|gb|EHH31601.1| E3 ubiquitin-protein ligase BRE1B [Macaca mulatta]
gi|355756716|gb|EHH60324.1| E3 ubiquitin-protein ligase BRE1B [Macaca fascicularis]
gi|380818426|gb|AFE81086.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Macaca mulatta]
gi|383423255|gb|AFH34841.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Macaca mulatta]
Length = 1001
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|402908150|ref|XP_003916817.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Papio
anubis]
gi|402908154|ref|XP_003916819.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 3 [Papio
anubis]
Length = 1001
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|75076748|sp|Q4R7K7.1|BRE1B_MACFA RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40
gi|67969122|dbj|BAE00915.1| unnamed protein product [Macaca fascicularis]
Length = 1001
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|443682347|gb|ELT86986.1| hypothetical protein CAPTEDRAFT_37793, partial [Capitella teleta]
Length = 209
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCN 68
CPIC +L++A I C ++FC +CI D + D E CP C
Sbjct: 148 FKCPICREMLKEAAIIRCCGYSFCDECIRDALLDSEHHTCPQCG 191
>gi|40788319|dbj|BAA31636.2| KIAA0661 protein [Homo sapiens]
Length = 1030
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 973 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 1027
>gi|333440442|ref|NP_001193963.1| E3 ubiquitin-protein ligase BRE1B isoform 3 [Homo sapiens]
gi|119572583|gb|EAW52198.1| ring finger protein 40, isoform CRA_b [Homo sapiens]
Length = 901
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 898
>gi|149067706|gb|EDM17258.1| ring finger protein 40, isoform CRA_c [Rattus norvegicus]
Length = 1013
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 956 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 1004
>gi|395514874|ref|XP_003761636.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Sarcophilus
harrisii]
Length = 1014
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 957 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 1005
>gi|351711445|gb|EHB14364.1| E3 ubiquitin-protein ligase BRE1B [Heterocephalus glaber]
Length = 1000
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 943 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 997
>gi|410913791|ref|XP_003970372.1| PREDICTED: zinc-binding protein A33-like [Takifugu rubripes]
Length = 474
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPV 66
MA N + +++ E +TCP+C L RD I EC H FC+ CI E+ CP
Sbjct: 1 MAEANALEELQSE-----LTCPVCLELFRDPV-ILECGHHFCKLCIIQCWGAIEVSNCPK 54
Query: 67 CNIDLGCVPLEKLRPDHTLQDVRAKIFPLKRRKVKAPEAVPS 108
C KLRP+ L +V + RK + +AVP+
Sbjct: 55 CRKSCE----RKLRPNSLLCNVVESV-----RKARTSDAVPA 87
>gi|348550704|ref|XP_003461171.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like isoform 3 [Cavia
porcellus]
Length = 573
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 16 VKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVP 75
VK + +A +TC IC LL D ++ C+HTFC C + + CP C P
Sbjct: 201 VKTDKMAETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSL--CPTCR-----CP 253
Query: 76 LEKLRPDHTLQDV 88
+E++ +H L ++
Sbjct: 254 VERICKNHILNNL 266
>gi|344309851|ref|XP_003423588.1| PREDICTED: tripartite motif-containing protein 60-like [Loxodonta
africana]
Length = 460
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISD-EEIECCP 65
MA + + + ET +CPIC LRD TTI +C H FC CI + D ++I CP
Sbjct: 1 MAFASFLADLHTET-----SCPICLDYLRDPTTI-DCGHNFCHSCIQQRWKDLQDIFPCP 54
Query: 66 VC 67
VC
Sbjct: 55 VC 56
>gi|23618895|ref|NP_703201.1| E3 ubiquitin-protein ligase BRE1B [Rattus norvegicus]
gi|81900544|sp|Q8CJB9.1|BRE1B_RAT RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40; AltName:
Full=Syntaxin-1-interacting RING finger protein;
Short=Protein staring
gi|23268469|gb|AAN16401.1|AF352815_1 staring [Rattus norvegicus]
gi|149067707|gb|EDM17259.1| ring finger protein 40, isoform CRA_d [Rattus norvegicus]
Length = 1002
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 945 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 993
>gi|348584334|ref|XP_003477927.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1 [Cavia
porcellus]
Length = 1001
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 998
>gi|398010998|ref|XP_003858695.1| hypothetical protein, conserved [Leishmania donovani]
gi|322496905|emb|CBZ31975.1| hypothetical protein, conserved [Leishmania donovani]
Length = 524
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 10 NNLVVKVKRET----IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCP 65
+ + ++K+ET ++A +TC +C ++ ++ C+H FC CI ++ E CP
Sbjct: 162 DYMFQRLKQETTRARMSAELTCSVCKSIFHRPCSVLPCMHVFCAGCISGWMAQGEQHACP 221
Query: 66 VCNIDLGCVPLEKLRPDHTLQ 86
C + + +RP H LQ
Sbjct: 222 KCRVS-----ITDVRPTHRLQ 237
>gi|356542160|ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 500
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDK---ISDEEIECCPVCNIDLGCVPLEKLRP 81
+ CPIC +++ T+ ECLH FCR+CI DK + + E CP C C LR
Sbjct: 120 VQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNE---CPACRTH--CASRRSLRD 173
Query: 82 DHTLQDVRAKIFP 94
D + A ++P
Sbjct: 174 DPNYDALIAALYP 186
>gi|348584336|ref|XP_003477928.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2 [Cavia
porcellus]
Length = 901
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 898
>gi|390371119|dbj|GAB65000.1| hypothetical protein PCYB_042020 [Plasmodium cynomolgi strain B]
Length = 296
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
TCPIC L+ D T++ C H+FC C+ I I+ CP C
Sbjct: 170 YTCPICLCLIHDPVTLNSCFHSFCWNCLATAIQKYSIDNCPSC 212
>gi|315284506|gb|ADU03778.1| tripartite motif protein 7.2 [Meleagris gallopavo]
Length = 505
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE-CCPVCNIDLGCVPLEKLRPDH 83
+TCP+C D ++EC H FCR C+ D CCP C VP RP+
Sbjct: 25 LTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREP---VPQRLFRPNR 81
Query: 84 TLQDV 88
+L ++
Sbjct: 82 SLGNI 86
>gi|150247146|ref|NP_001092824.1| zinc finger protein RFP [Gallus gallus]
gi|148356954|dbj|BAF62978.1| Tripartite motif protein 7 [Gallus gallus]
Length = 505
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIE-CCPVCNIDLGCVPLEKLRPDH 83
+TCP+C D ++EC H FCR C+ D CCP C VP RP+
Sbjct: 25 LTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREP---VPQRLFRPNR 81
Query: 84 TLQDV 88
+L ++
Sbjct: 82 SLGNI 86
>gi|392344524|ref|XP_574516.4| PREDICTED: uncharacterized protein LOC499223 [Rattus norvegicus]
Length = 1053
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 19 ETIAACMTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIE-CCPVCNIDLGCV 74
E I +TCPIC LL++ + ++C H+FCR CI Y+ + E E CPVC + C
Sbjct: 7 EMIKEEVTCPICLELLKEPVS-TDCNHSFCRACITINYESNRNTEGEGSCPVCRV---CY 62
Query: 75 PLEKLRPDHTLQDVRAKIFPLK 96
LRP+ + ++ ++ K
Sbjct: 63 LFRNLRPNRHVANIVERLKGFK 84
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 19/108 (17%)
Query: 2 RVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI---YDKISD 58
R+ MAS+ L E I +TCP+C LL++ + ++C H+FCR CI Y+ +
Sbjct: 497 RITATMASSVL------EMIKEEVTCPLCLELLKEPVS-ADCNHSFCRACITPNYESNRN 549
Query: 59 EEIE-CCPVCNIDLGCVPLEKLRPD-HTLQDVRA----KIFPLKRRKV 100
E + CPVC + LRP+ H + V + K P K +KV
Sbjct: 550 TEGQGSCPVCRVR---YLFRNLRPNQHVAKIVESLKGFKSIPEKEQKV 594
>gi|146078147|ref|XP_001463473.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134067559|emb|CAM65838.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 524
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 10 NNLVVKVKRET----IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCP 65
+ + ++K+ET ++A +TC +C ++ ++ C+H FC CI ++ E CP
Sbjct: 162 DYMFQRLKQETTRARMSAELTCSVCKSIFHRPCSVLPCMHVFCAGCISGWMAQGEQHACP 221
Query: 66 VCNIDLGCVPLEKLRPDHTLQ 86
C + + +RP H LQ
Sbjct: 222 KCRVS-----ITDVRPTHRLQ 237
>gi|6473773|dbj|BAA87180.1| Nucleotide excision repair protein [Schizosaccharomyces pombe]
Length = 185
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Query: 5 REMASN-NLVVKVKRETI----AACMTCPICNTLLRDATTISECLHTFCRKCIYDKIS-- 57
R+MA + +LV+ KR+T+ + C IC+ + +DA S C HTFCR C+ + I+
Sbjct: 45 RQMADHPDLVLASKRKTVDIENQENIVCKICDEVAQDAIE-SRCHHTFCRLCVTEYINAA 103
Query: 58 -DEEIECCPVC----NIDLGCVPLEKLRPDHTLQ-DVRAKIFPLKRRKVKAPEAVPSVTL 111
D E CP C +IDL LE + + +I R EA+
Sbjct: 104 GDGENVNCPSCFIPLSIDLSAPALEDFSEEKFKNASILNRIDMNSWRSSTKIEALVEELY 163
Query: 112 PVRRKERSLSSLVVS 126
+R+K+R+L S+V S
Sbjct: 164 LLRKKDRTLKSIVFS 178
>gi|348521924|ref|XP_003448476.1| PREDICTED: hypothetical protein LOC100711390 [Oreochromis
niloticus]
Length = 949
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
++CP+C + RD +S C H+FCR C+ +EI CPVC
Sbjct: 9 LSCPVCRDIFRDPVVLS-CSHSFCRNCLKRWWRKKEIRQCPVC 50
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
++CP+C+ + RD ++ C H+FC+ C+ + + + + CPVC
Sbjct: 499 LSCPVCHDIFRDPVFLT-CSHSFCKTCLKNCWAQKLGQQCPVC 540
>gi|344309545|ref|XP_003423437.1| PREDICTED: tripartite motif-containing protein 60-like [Loxodonta
africana]
Length = 460
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISD-EEIECCP 65
MA + + + ET +CPIC LRD TTI +C H FC CI + D ++I CP
Sbjct: 1 MAFASFLADLHTET-----SCPICLDYLRDPTTI-DCGHNFCHSCIQQRWKDLQDIFPCP 54
Query: 66 VC 67
VC
Sbjct: 55 VC 56
>gi|444523528|gb|ELV13573.1| Tripartite motif-containing protein 5 [Tupaia chinensis]
Length = 476
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKIS----DEEIEC-CPVCNIDLGCVPLEKL 79
+TCPIC LL ++ +C H+FC+ CI + +E EC CPVC + L L
Sbjct: 13 VTCPICLELLTKPQSL-DCGHSFCQSCITANQTKSTVGQEGECFCPVCRVS---YRLGSL 68
Query: 80 RPDHTLQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSL 120
RP+H L ++ K+ R +PE V R E+ L
Sbjct: 69 RPNHYLANIVEKL----REANLSPEEKQEVHHCARHGEKLL 105
>gi|194376814|dbj|BAG57553.1| unnamed protein product [Homo sapiens]
Length = 435
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 378 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGAHDFHRI 432
>gi|354499385|ref|XP_003511789.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2
[Cricetulus griseus]
Length = 901
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 844 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 892
>gi|354499383|ref|XP_003511788.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1
[Cricetulus griseus]
gi|344247531|gb|EGW03635.1| E3 ubiquitin-protein ligase BRE1B [Cricetulus griseus]
Length = 1001
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|126334514|ref|XP_001364447.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B [Monodelphis domestica]
Length = 1014
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 957 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 1005
>gi|115430075|ref|NP_001068571.1| finTRIM family, member 82 [Danio rerio]
gi|115313297|gb|AAI24300.1| Si:dkey-252h13.6 [Danio rerio]
Length = 573
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIECCPVCNIDLGCVPLEKLRP 81
CP+C LLRD I C H+FC CI +++ I CP C I P+ LRP
Sbjct: 10 FNCPLCTELLRDPVAIP-CGHSFCMDCISGYWNEADYTGIYICPQCRITFTQRPV--LRP 66
Query: 82 DHTLQDVRAKI 92
+ TL V KI
Sbjct: 67 NATLTKVAEKI 77
>gi|414877785|tpg|DAA54916.1| TPA: hypothetical protein ZEAMMB73_107885 [Zea mays]
Length = 237
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 332 IWFSLVASEDQRGSLPLPQISSSYLRIKDRNIPVSFIQKYLMMKLDLPSESEV 384
+WF L A+++QR PL QI S+LR+++ + V + +YL+ KL L +S+V
Sbjct: 185 LWFLLRAAQNQRREPPLLQIPRSFLRVREGRMTVRVVMRYLVNKLGLDDDSQV 237
>gi|148685616|gb|EDL17563.1| ring finger protein 40, isoform CRA_c [Mus musculus]
Length = 1012
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 955 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 1003
>gi|145552431|ref|XP_001461891.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429728|emb|CAK94518.1| unnamed protein product [Paramecium tetraurelia]
Length = 276
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 21 IAACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
I + CPIC +L + A I +C H FC++CI I + + CP C
Sbjct: 49 IQDYLKCPICLSLFKQAVYIKDCSHRFCKECIEKSIRSQREKSCPTC 95
>gi|444725788|gb|ELW66342.1| E3 ubiquitin-protein ligase BRE1B [Tupaia chinensis]
Length = 1031
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 974 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 1022
>gi|23468326|gb|AAH38348.1| Ring finger protein 40 [Mus musculus]
Length = 1001
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|296237424|ref|XP_002763743.1| PREDICTED: tripartite motif-containing protein 60-like [Callithrix
jacchus]
Length = 460
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 26 TCPICNTLLRDATTISECLHTFCRKCIYDKISD-EEIECCPVCNIDLGCVPLEKLRPDHT 84
+CPIC L+D T + C H FCR CI+ D ++I CPVC L P E LR +
Sbjct: 15 SCPICLGYLKDPVT-THCGHNFCRSCIHQCWEDLQDIFPCPVC---LHHCPEENLRSNTQ 70
Query: 85 LQDVRAKI--FPLKRRKVKAPE 104
+ + + P RRK K E
Sbjct: 71 FRHMTDVVQQLPAMRRKRKGQE 92
>gi|148685615|gb|EDL17562.1| ring finger protein 40, isoform CRA_b [Mus musculus]
Length = 668
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 611 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 659
>gi|153792019|ref|NP_001093485.1| E3 ubiquitin-protein ligase CHFR [Danio rerio]
gi|259585923|sp|A5WW08.1|CHFR_DANRE RecName: Full=E3 ubiquitin-protein ligase CHFR; AltName:
Full=Checkpoint with forkhead and RING finger domains
protein
Length = 637
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+TC IC LL D ++ C+HTFC C + E CP C P+E++R +H
Sbjct: 275 LTCIICQDLLYDCISVQPCMHTFCAACYSGWM--ERSSFCPTCR-----CPVERIRKNHI 327
Query: 85 LQDV 88
L ++
Sbjct: 328 LNNL 331
>gi|268370231|ref|NP_954597.2| tripartite motif-containing 79 isoform 1 [Mus musculus]
Length = 497
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 19 ETIAACMTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCV 74
E I +TCPIC LL+++ + ++C H+FCR CI Y+ + E E CPVC +
Sbjct: 7 EMIKEEVTCPICLELLKESVS-ADCNHSFCRACITLHYESNRNPEGEGNCPVCRVPY--- 62
Query: 75 PLEKLRPDHTLQDV--RAKIF---PLKRRKVKA 102
E LRP+ + ++ R K F P + +KV A
Sbjct: 63 LFENLRPNRHVANIVERLKGFKSIPEEEQKVNA 95
>gi|156349332|ref|XP_001622015.1| hypothetical protein NEMVEDRAFT_v1g221282 [Nematostella vectensis]
gi|156208403|gb|EDO29915.1| predicted protein [Nematostella vectensis]
Length = 854
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEI--ECCPVCN 68
+ C IC+ LLRDA + CLHT+CR+CI D I + CP CN
Sbjct: 121 LACGICHALLRDARVLP-CLHTYCRRCIEDIILHRQSVRAHCPSCN 165
>gi|34785307|gb|AAH56631.1| Expressed sequence AI451617 [Mus musculus]
Length = 497
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 19 ETIAACMTCPICNTLLRDATTISECLHTFCRKCI---YDKISDEEIEC-CPVCNIDLGCV 74
E I +TCPIC LL+++ + ++C H+FCR CI Y+ + E E CPVC +
Sbjct: 7 EMIKEEVTCPICLELLKESVS-ADCNHSFCRACITLHYESNRNPEGEGNCPVCRVPY--- 62
Query: 75 PLEKLRPDHTLQDV--RAKIF---PLKRRKVKA 102
E LRP+ + ++ R K F P + +KV A
Sbjct: 63 LFENLRPNRHVANIVERLKGFKSIPEEEQKVNA 95
>gi|74196106|dbj|BAE32971.1| unnamed protein product [Mus musculus]
Length = 1001
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|72037360|ref|XP_789590.1| PREDICTED: midline-1-like [Strongylocentrotus purpuratus]
Length = 287
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIE--CCPVC 67
+TCP+C + +AT ++ C HTFCRKC+ YD +S +E++ CP+C
Sbjct: 17 LTCPLCLGIFDEATILTSCGHTFCRKCLKNYD-LSHQELDHMICPLC 62
>gi|229093990|ref|NP_758485.2| E3 ubiquitin-protein ligase BRE1B [Mus musculus]
gi|84027769|sp|Q3U319.2|BRE1B_MOUSE RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40
gi|26354679|dbj|BAC40966.1| unnamed protein product [Mus musculus]
gi|74142858|dbj|BAE42468.1| unnamed protein product [Mus musculus]
gi|148685614|gb|EDL17561.1| ring finger protein 40, isoform CRA_a [Mus musculus]
Length = 1001
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 992
>gi|390347364|ref|XP_003726762.1| PREDICTED: uncharacterized protein LOC100888897
[Strongylocentrotus purpuratus]
Length = 632
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIE--CCPVC 67
+TCP+C + +AT ++ C HTFCRKC+ YD +S ++++ CP+C
Sbjct: 17 LTCPLCLDIFDEATILTSCGHTFCRKCLKNYD-LSHQDLDHMLCPLC 62
>gi|363732435|ref|XP_001234476.2| PREDICTED: tripartite motif-containing protein 35 [Gallus gallus]
Length = 525
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+ CPIC R+A T+ C H FC+ CI + + CPVC + LR +HT
Sbjct: 59 LLCPICYEPFREAVTLC-CGHNFCKGCI-SRSWEHRQHTCPVCKET---SSFDDLRINHT 113
Query: 85 LQDVRAKIFPLKRRKVKAPEAVPSVTLPVRRKERSLSSL 123
L ++ I + R++ P A+ P+ +E +L L
Sbjct: 114 LNNLVEMILREEGRRLGRPAAL----CPLHHEEANLFCL 148
>gi|390360009|ref|XP_003729611.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13-like
[Strongylocentrotus purpuratus]
Length = 118
Score = 46.2 bits (108), Expect = 0.036, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIE--CCPVC 67
+TCP+C + +AT ++ C HTFCRKC+ YD +S ++++ CP+C
Sbjct: 17 LTCPLCLDIFDEATILTSCGHTFCRKCLMNYD-LSHQDLDHMICPLC 62
>gi|37360032|dbj|BAC97994.1| mKIAA0661 protein [Mus musculus]
Length = 1035
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 978 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 1026
>gi|26335243|dbj|BAC31322.1| unnamed protein product [Mus musculus]
Length = 616
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 559 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNAAFGA 607
>gi|344305785|ref|XP_003421570.1| PREDICTED: tripartite motif-containing protein 5-like, partial
[Loxodonta africana]
Length = 251
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 15/95 (15%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCI-----YDKISDEEI 61
MAS +VVK++ E +TCPIC LLR+ ++ +C H+FC+ CI +S E
Sbjct: 1 MASA-IVVKLQEE-----VTCPICLELLREPLSL-DCGHSFCQACITVNSKTSMVSSEGE 53
Query: 62 ECCPVCNIDLGCVPLEKLRPDHTLQDVRAKIFPLK 96
CP+C I + LRP+ L ++ K+ +K
Sbjct: 54 STCPMCRIK---YQADNLRPNQHLANIVEKLREVK 85
>gi|301622630|ref|XP_002940628.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B [Xenopus (Silurana)
tropicalis]
Length = 991
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKL 79
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G ++
Sbjct: 934 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVKTRYESRQRK-CPKCNAAFGAHDFHRI 988
>gi|356514382|ref|XP_003525885.1| PREDICTED: uncharacterized protein LOC100798536 [Glycine max]
Length = 845
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 25 MTCPICNTLLRDATTISE-CLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDH 83
+ CP+CN +++DA S+ C +FC +CI D I + I C NI + L P+
Sbjct: 291 LRCPLCNDVMKDAVLTSKCCFKSFCDRCIRDYIISKSICVCGATNIL-----ADDLLPNK 345
Query: 84 TLQDVRAKIF 93
TL+D +I
Sbjct: 346 TLRDTINRIL 355
>gi|390332595|ref|XP_003723539.1| PREDICTED: uncharacterized protein LOC100892505
[Strongylocentrotus purpuratus]
Length = 632
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCI--YDKISDEEIE--CCPVC 67
+TCP+C + +AT ++ C HTFCRKC+ YD +S ++++ CP+C
Sbjct: 17 LTCPLCLDIFDEATILTSCGHTFCRKCLKNYD-LSHQDLDHMICPLC 62
>gi|356563334|ref|XP_003549919.1| PREDICTED: uncharacterized protein LOC100808703 [Glycine max]
Length = 849
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 25 MTCPICNTLLRDATTISE-CLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDH 83
+ CP+CN +++DA S+ C +FC +CI D I + I C NI + L P+
Sbjct: 291 LRCPLCNDVMKDAVLTSKCCFKSFCDRCIRDYIISKSICVCGATNIL-----ADDLLPNK 345
Query: 84 TLQDVRAKIF 93
TL+D +I
Sbjct: 346 TLRDTINRIL 355
>gi|157423476|gb|AAI53312.1| Si:dkey-69h6.7 protein [Danio rerio]
Length = 636
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGCVPLEKLRPDHT 84
+TC IC LL D ++ C+HTFC C + E CP C P+E++R +H
Sbjct: 275 LTCIICQDLLYDCISVQPCMHTFCAACYSGWM--ERSSFCPTCR-----CPVERIRKNHI 327
Query: 85 LQDV 88
L ++
Sbjct: 328 LNNL 331
>gi|145358843|ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
gi|302425246|sp|Q9FKW0.2|RNG1A_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase RING1a; AltName:
Full=Polycomb complex protein RING1a; AltName:
Full=Protein RING1a; Short=AtRING1a; AltName: Full=Ring
finger protein 434
gi|332007702|gb|AED95085.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
Length = 522
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKCIYD--KISDEEIECCPVCNIDLGCVPLEKLRPD 82
+ CPIC +++ T+ ECLH FCR+CI ++ + E CP C C LR D
Sbjct: 134 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRKH--CASRRSLRDD 188
Query: 83 HTLQDVRAKIF 93
+ A +F
Sbjct: 189 PKFDALIAALF 199
>gi|148684775|gb|EDL16722.1| mCG121089 [Mus musculus]
Length = 520
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 25 MTCPICNTLLRDATTISECLHTFCRKC-IYDKISDEEIE---CCPVCNIDLGCVPLEKLR 80
+TCPIC LL++ + ++C H+FC+ C I + +S+ ++ CPVC + E LR
Sbjct: 13 VTCPICLELLKEPVS-TDCGHSFCQTCIILNYVSNRRMDGVGSCPVCRVGY---LFENLR 68
Query: 81 PDHTLQDVRAKIFPLK 96
P+ + ++ +I LK
Sbjct: 69 PNQNMINIVKRIKELK 84
>gi|431906852|gb|ELK10973.1| E3 ubiquitin-protein ligase BRE1B [Pteropus alecto]
Length = 1001
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 ACMTCPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNIDLGC 73
A +TCP CNT +DA +++C H FC +C+ + + + CP CN G
Sbjct: 944 ARLTCPCCNTRKKDAV-LTKCFHVFCFECVRGRYEARQRK-CPKCNSAFGA 992
>gi|405965495|gb|EKC30864.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 697
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Query: 11 NLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKI-------SDEEIEC 63
N VVK RE CP+C ++ T+S C+H+FC+KCI D I SD
Sbjct: 2 NAVVKAAREQ----TLCPVCGDRFKEPKTLS-CVHSFCKKCIADHIVKTTKNQSDPSAFN 56
Query: 64 CPVC 67
CPVC
Sbjct: 57 CPVC 60
>gi|296237067|ref|XP_002763595.1| PREDICTED: tripartite motif-containing protein 60-like [Callithrix
jacchus]
Length = 460
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 26 TCPICNTLLRDATTISECLHTFCRKCIYDKISD-EEIECCPVCNIDLGCVPLEKLRPDHT 84
+CPIC L+D T + C H FCR CI+ D ++I CPVC L P E LR +
Sbjct: 15 SCPICLGYLKDPVT-THCGHNFCRSCIHQCWEDLQDIFPCPVC---LHHCPEENLRSNTQ 70
Query: 85 LQDVRAKI--FPLKRRKVKAPE 104
+ + + P RRK K E
Sbjct: 71 FRHMTDVVQQLPAMRRKRKVQE 92
>gi|258596895|ref|XP_001349606.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254688468|gb|AAC71877.3| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 568
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 27 CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVC 67
CPIC +L+ + T++ C H+FC KC+ I I+ CP C
Sbjct: 214 CPICLSLIHEPVTLNSCFHSFCWKCLATAIQKYSIDNCPSC 254
>gi|449546376|gb|EMD37345.1| hypothetical protein CERSUDRAFT_105371 [Ceriporiopsis subvermispora
B]
Length = 813
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 18 RETIAACMT---CPICNTLLRDATTISECLHTFCRKCIYDKISDEEIECCPVCNI 69
++ I CM+ C C +R+ T I++C+H+FC++C+ +IS + + CP CN+
Sbjct: 748 QQEIDKCMSILKCSTCRINMRN-TVITKCMHSFCKQCVESRISTRQRK-CPACNL 800
>gi|77551611|gb|ABA94408.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
Length = 893
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 1 MRVEREMASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIYDKI---S 57
V + + VK I + CPIC +++ A I+ECLH FCR CI + +
Sbjct: 73 FHVSNYFLHFTMFILVKLMDIRKEVQCPICLGIIQKARIITECLHRFCRDCIEKSMWLGN 132
Query: 58 DEEIECCPVC 67
DE CP C
Sbjct: 133 DE----CPAC 138
>gi|56805539|dbj|BAD83389.1| tripartite motif protein 31 isoform beta [Sus scrofa]
Length = 411
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 7 MASNNLVVKVKRETIAACMTCPICNTLLRDATTISECLHTFCRKCIY-DKISDEEIECCP 65
MA K++ E I CPIC +L+D TI +C H+FC +CI + + + CP
Sbjct: 1 MAGQQFTNKLQEEVI-----CPICMDILQDPATI-DCGHSFCLQCIMRSREGLDSVIKCP 54
Query: 66 VCNIDLGCVPLEKLRPDHTLQDVRAKI 92
+CN V + +RP+ L ++ KI
Sbjct: 55 LCN---KIVKRDTIRPNWLLVNLVEKI 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.127 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,481,550,268
Number of Sequences: 23463169
Number of extensions: 263626982
Number of successful extensions: 933598
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 5748
Number of HSP's that attempted gapping in prelim test: 916996
Number of HSP's gapped (non-prelim): 18693
length of query: 441
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 295
effective length of database: 8,933,572,693
effective search space: 2635403944435
effective search space used: 2635403944435
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)