Your job contains 1 sequence.
>013554
MELSSSFASLVSDNISFSSAISPFPLQSSLKTLKLTKPTSQNLRILAVAVEPQQDLPHNS
PQKLLKELAERKKVTSPKKKVPPKKFILRPPLDDKKLVDRFLKSPQLSLKSFPLLSSCLP
PSRLNNADQTWIDEYLLEAKQALGYSLEPSDQLGDDNPAKHFDTLLYLAFQHPFCERNKA
RHVRAGHSRLCFLGQFVLELAFCEFFLQRYPRESPAPMRERVFGLIGRRNLPKWIKAASL
QNLIFPFDEMDRLIRKEREPPVKSVFWALFGAIYLCFGFPEVYRVLFEVFGMDPEDKECQ
PKLRRQLEDVDYVSVEFEGNKLTWQDVAAYKPPEDALFAQPRLFRACVPPGMHRFRGNLW
DFDSRPQVMQTLGYPLVVQDRIPEITEARNIELGLGLQLCFLHPSKYKFEHPRFCFERLE
YVGQKIQVKSYSCFCPFYNQF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013554
(441 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126397 - symbol:AT4G37510 species:3702 "Arabi... 1590 2.4e-163 1
TIGR_CMR|BA_3987 - symbol:BA_3987 "ribonuclease III" spec... 113 0.00050 1
>TAIR|locus:2126397 [details] [associations]
symbol:AT4G37510 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0004525
"ribonuclease III activity" evidence=IEA;ISS] [GO:0006396 "RNA
processing" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] [GO:0051607 "defense response to virus"
evidence=RCA] InterPro:IPR000999 InterPro:IPR011907 Pfam:PF00636
PROSITE:PS50142 SMART:SM00535 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003723 GO:GO:0006396 EMBL:AL161591
EMBL:AL035601 GO:GO:0016075 GO:GO:0004525 Gene3D:1.10.1520.10
SUPFAM:SSF69065 PANTHER:PTHR11207 UniGene:At.46639 EMBL:BT025333
IPI:IPI00530332 PIR:T04745 RefSeq:NP_195467.1 UniGene:At.22038
UniGene:At.70783 ProteinModelPortal:Q9SZV0 SMR:Q9SZV0 STRING:Q9SZV0
PaxDb:Q9SZV0 PRIDE:Q9SZV0 EnsemblPlants:AT4G37510.1 GeneID:829906
KEGG:ath:AT4G37510 TAIR:At4g37510 eggNOG:NOG296007
HOGENOM:HOG000000695 InParanoid:Q9SZV0 OMA:RESPGPM PhylomeDB:Q9SZV0
ProtClustDB:CLSN2685799 ArrayExpress:Q9SZV0 Genevestigator:Q9SZV0
Uniprot:Q9SZV0
Length = 537
Score = 1590 (564.8 bits), Expect = 2.4e-163, P = 2.4e-163
Identities = 307/427 (71%), Positives = 333/427 (77%)
Query: 4 SSSFASLVSDN---ISFSSAISPFXXXXXXXXXXXXXXXXXNLRILAVAVEPQQDLPHNS 60
SSS + S + ISFSS+IS F NLRI A Q LP +S
Sbjct: 9 SSSLLRICSSSAPEISFSSSISQFPSKTQSILTKSRFQ---NLRICASVTAETQGLPRDS 65
Query: 61 PQKLLKELAERXXXXXXXXXXXXXXFILRPPLDDKKLVDRXXXXXXXXXXXXXXXXXXXX 120
PQ+LLKELA+R FILRPPLDDKKL +R
Sbjct: 66 PQRLLKELAQRKTATGPKKKVPPKRFILRPPLDDKKLAERFLNSPQLSLKSFPLLSSCLP 125
Query: 121 XXRLNNADQTWIDEYLLEAKQALGYSLEPSDQLGDDNPAKHFDTLLYLAFQHPFCERNKA 180
+LNNAD+TWIDEYLLE KQALGYSLEPS+ LGDDNPAKHFDTLLYLAFQHP C+R +A
Sbjct: 126 SSKLNNADKTWIDEYLLEVKQALGYSLEPSESLGDDNPAKHFDTLLYLAFQHPSCDRARA 185
Query: 181 RHVRAGHSRLCFLGQFVLELAFCEFFLQRYPRESPAPMRERVFGLIGRRNLPKWIKAASL 240
RHV+ GHSRL FLGQ+VLELA EFFLQRYPRESP PMRERVF LIG+R LPKWIKAASL
Sbjct: 186 RHVKNGHSRLWFLGQYVLELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASL 245
Query: 241 QNLIFPFDEMDRLIRKEREPPVKSVFWALFGAIYLCFGFPEVYRVLFEVFGMDPEDKECQ 300
QNLIFP+D+MD+LIRKEREPPVKSVFWALFGAIYLCFG PEVYRVLFEVFGMDP+ ECQ
Sbjct: 246 QNLIFPYDDMDKLIRKEREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADECQ 305
Query: 301 PKLRRQLEDVDYVSVEFEGNKLTWQDVAAYKPPEDALFAQPRLFRACVPPGMHRFRGNLW 360
P+ RRQLEDVDYVSVEFEG KL WQD+A YKPPEDALFA PRLFRACVPPGMHRFRGN+W
Sbjct: 306 PRSRRQLEDVDYVSVEFEGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGNIW 365
Query: 361 DFDSRPQVMQTLGYPLVVQDRIPEITEARNIELGLGLQLCFLHPSKYKFEHPRFCFERLE 420
DFDS+P+VMQTLGYPL + DRI EITEARNIELGLGLQLCFLHPSK+KFEHPRFCFERLE
Sbjct: 366 DFDSKPKVMQTLGYPLTMNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLE 425
Query: 421 YVGQKIQ 427
YVGQKIQ
Sbjct: 426 YVGQKIQ 432
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 50/168 (29%), Positives = 88/168 (52%)
Query: 141 QALGYSLEPSDQLGDDNPAKHFDT-L-LYLAFQHPFCERNKARHVRAGHSRLCFLGQFVL 198
Q LGY L +D++ + A++ + L L L F HP ++K H R RL ++GQ +
Sbjct: 375 QTLGYPLTMNDRIKEITEARNIELGLGLQLCFLHP--SKHKFEHPRFCFERLEYVGQKIQ 432
Query: 199 ELAFCEFFLQRYPRESPAP-MRERVFGLIGRRNLPKWIKAASLQNLIFPFDEM-DRLI-- 254
++A E L ++ ++P ++E+ L+ + ++++ L N I +E+ DR
Sbjct: 433 DIAMAERLLMKH-LDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVHDRYEHN 491
Query: 255 RKEREPPVKSVFWALFGAIYLCFGFPEVYRVLFEVFGMDPEDKECQPK 302
R+ R P +V A+ G Y +G P+V R++FEVF + + QPK
Sbjct: 492 RRLRNPATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFE----QIQPK 535
>TIGR_CMR|BA_3987 [details] [associations]
symbol:BA_3987 "ribonuclease III" species:198094 "Bacillus
anthracis str. Ames" [GO:0004525 "ribonuclease III activity"
evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
HAMAP:MF_00104 InterPro:IPR000999 InterPro:IPR001159
InterPro:IPR011907 Pfam:PF00035 Pfam:PF00636 PROSITE:PS00517
PROSITE:PS50137 PROSITE:PS50142 SMART:SM00358 SMART:SM00535
InterPro:IPR014720 GO:GO:0005737 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006397
Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0008033 GO:GO:0090305
GO:GO:0016075 GO:GO:0019843 GO:GO:0006364 GO:GO:0004525
Gene3D:1.10.1520.10 SUPFAM:SSF69065 eggNOG:COG0571
PANTHER:PTHR11207 KO:K03685 ProtClustDB:PRK00102 TIGRFAMs:TIGR02191
RefSeq:NP_846229.1 RefSeq:YP_020627.1 RefSeq:YP_029951.1
ProteinModelPortal:Q81WI8 DNASU:1087539
EnsemblBacteria:EBBACT00000008054 EnsemblBacteria:EBBACT00000016917
EnsemblBacteria:EBBACT00000023512 GeneID:1087539 GeneID:2816770
GeneID:2849362 KEGG:ban:BA_3987 KEGG:bar:GBAA_3987 KEGG:bat:BAS3700
HOGENOM:HOG000246808 OMA:LTHKSCK
BioCyc:BANT260799:GJAJ-3758-MONOMER
BioCyc:BANT261594:GJ7F-3875-MONOMER Uniprot:Q81WI8
Length = 245
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 34/127 (26%), Positives = 55/127 (43%)
Query: 163 DTLLYLAFQHPFCERNKARHVRAGHSRLCFLGQFVLELAFCEFFLQRYPRESPAPMRERV 222
+ LL AF H + + RL FLG VLEL ++ Q+YP S + +
Sbjct: 33 EKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLR 92
Query: 223 FGLIGRRNLPKWIKAASLQNLIFPFDEMDRLIRKEREPPVKSVFWALFGAIYLCFGFPEV 282
++ +L ++ S +L+ + +ER + VF A GA+YL G V
Sbjct: 93 AAIVCEPSLVRFANELSFGSLVLLGKGEEMTGGRERPALLADVFEAFIGALYLDQGLETV 152
Query: 283 YRVLFEV 289
+ L E+
Sbjct: 153 WGFLKEI 159
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.142 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 441 388 0.00093 117 3 11 22 0.47 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 611 (65 KB)
Total size of DFA: 272 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.72u 0.14s 30.86t Elapsed: 00:00:01
Total cpu time: 30.72u 0.14s 30.86t Elapsed: 00:00:01
Start: Sat May 11 03:16:32 2013 End: Sat May 11 03:16:33 2013